BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3759
(844 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G4S1|RS2_HERAR 30S ribosomal protein S2 OS=Herminiimonas arsenicoxydans GN=rpsB
PE=3 SV=1
Length = 248
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 198/225 (88%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ YIFGHRN+IHI+NLEKTL MY++A++YI QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLS 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKE++ +
Sbjct: 61 SNRGTVLFVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+GS+ KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL I
Sbjct: 121 EDGSMEKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVDTNHSP+G+ Y+IPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|A6SZQ1|RS2_JANMA 30S ribosomal protein S2 OS=Janthinobacterium sp. (strain
Marseille) GN=rpsB PE=3 SV=2
Length = 248
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 158/225 (70%), Positives = 199/225 (88%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRN+IHI+NLEKT+ MY++A++YI QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLS 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKEM+ I
Sbjct: 61 SNRGTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASI 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+GS++KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL I
Sbjct: 121 EDGSVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVDTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|B2UB06|RS2_RALPJ 30S ribosomal protein S2 OS=Ralstonia pickettii (strain 12J)
GN=rpsB PE=3 SV=1
Length = 247
Score = 337 bits (864), Expect = 3e-91, Method: Composition-based stats.
Identities = 153/224 (68%), Positives = 193/224 (86%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY+ A++Y+ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R ++A EA RAGMPF+D RWLGG+LTNFKT+KTSI+RLK+M++
Sbjct: 61 ANRGTILFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G+ +SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q0KA16|RS2_CUPNH 30S ribosomal protein S2 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=rpsB PE=3 SV=1
Length = 248
Score = 333 bits (855), Expect = 3e-90, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 193/224 (86%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL
Sbjct: 1 MSVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+
Sbjct: 61 ANRGTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G++ +SKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGALETMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q8XZJ1|RS2_RALSO 30S ribosomal protein S2 OS=Ralstonia solanacearum (strain GMI1000)
GN=rpsB PE=3 SV=1
Length = 247
Score = 332 bits (850), Expect = 1e-89, Method: Composition-based stats.
Identities = 151/224 (67%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+
Sbjct: 61 ANRGTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G++ +SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGALESMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|B3R2B7|RS2_CUPTR 30S ribosomal protein S2 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=rpsB PE=3 SV=1
Length = 247
Score = 331 bits (849), Expect = 1e-89, Method: Composition-based stats.
Identities = 149/224 (66%), Positives = 192/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL
Sbjct: 1 MSVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+
Sbjct: 61 ANRGTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G++ +SKKEAL+F R+ +KL + IGGIK M +PDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGALETMSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q470D7|RS2_CUPPJ 30S ribosomal protein S2 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=rpsB PE=3 SV=1
Length = 247
Score = 331 bits (848), Expect = 2e-89, Method: Composition-based stats.
Identities = 149/224 (66%), Positives = 192/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL
Sbjct: 1 MSVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT++FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+
Sbjct: 61 ANRGTIMFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G++ +SKKEAL+F R+ +KL + IGGIK M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGALDTMSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q1LNF8|RS2_RALME 30S ribosomal protein S2 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=rpsB PE=3 SV=1
Length = 247
Score = 329 bits (843), Expect = 6e-89, Method: Composition-based stats.
Identities = 149/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL
Sbjct: 1 MSVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+
Sbjct: 61 ANRGTVLFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G++ +SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGALETMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|A1TN69|RS2_ACIAC 30S ribosomal protein S2 OS=Acidovorax citrulli (strain AAC00-1)
GN=rpsB PE=3 SV=1
Length = 250
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 189/225 (84%), Gaps = 1/225 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLT 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 61 ANRGTILMVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L F R+ KL + IGGI++MN +PDAIFIIDVG+HK AV+EA KL I
Sbjct: 121 EAG-LESMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVD+NHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 180 PLIGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|A1WHU2|RS2_VEREI 30S ribosomal protein S2 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rpsB PE=3 SV=1
Length = 250
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 147/225 (65%), Positives = 190/225 (84%), Gaps = 1/225 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+++REMLEAGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A +++ QL
Sbjct: 1 MSVSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A EA+RAGMPF+DQRWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 61 ANRGTILMVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + LSKKE L F R+ KL + IGGI++M+ +P+AIF+IDVG+HK AV+EA KL I
Sbjct: 121 EAG-LDSLSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
+IGVVDTNHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 180 ALIGVVDTNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|Q63T12|RS2_BURPS 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
K96243) GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NAU8|RS2_BURP6 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain 668)
GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q3JR28|RS2_BURP1 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1710b) GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NWN1|RS2_BURP0 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1106a) GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A1V569|RS2_BURMS 30S ribosomal protein S2 OS=Burkholderia mallei (strain SAVP1)
GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q62JC4|RS2_BURMA 30S ribosomal protein S2 OS=Burkholderia mallei (strain ATCC 23344)
GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A2SB72|RS2_BURM9 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10229)
GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3MKU3|RS2_BURM7 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10247)
GN=rpsB PE=3 SV=1
Length = 246
Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 191/224 (85%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q2YBA7|RS2_NITMU 30S ribosomal protein S2 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsB PE=3 SV=2
Length = 248
Score = 327 bits (837), Expect = 3e-88, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 190/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+R+MLEAGVHFGHQTRFW+PKM+ YIFGHRNKIHIINLEKTL MY++A+ Y+ QL
Sbjct: 1 MSVTMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+KGT+LFVGTKRQAR ++ EA+R G PF+DQRWLGG+LTNFKTIK S++RL +M+ +
Sbjct: 61 ANKGTILFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMM 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G++ KLSKKEAL R+ KLNR +GGIK+M +PDA+F+IDVGY KGA++EA KL I
Sbjct: 121 EDGTLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
PI+G+VD+NHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 181 PIVGIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>sp|B2JIC6|RS2_BURP8 30S ribosomal protein S2 OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=rpsB PE=3 SV=1
Length = 250
Score = 325 bits (833), Expect = 1e-87, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 190/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA A RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDD++K++ALYT+G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGR 224
>sp|Q2L162|RS2_BORA1 30S ribosomal protein S2 OS=Bordetella avium (strain 197N) GN=rpsB
PE=3 SV=1
Length = 249
Score = 325 bits (832), Expect = 1e-87, Method: Composition-based stats.
Identities = 145/220 (65%), Positives = 186/220 (84%)
Query: 5 IREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKG 64
+REMLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G
Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGG 63
Query: 65 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 124
+LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+K+SI+RLKEM++ + +GS
Sbjct: 64 NILFVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGS 123
Query: 125 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 184
+ +L+KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++
Sbjct: 124 VERLTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVA 183
Query: 185 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
VVDTNHSPDG++Y+IPGNDDSA++IALY KGI DA L+ +
Sbjct: 184 VVDTNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEGR 223
>sp|Q13XB6|RS2_BURXL 30S ribosomal protein S2 OS=Burkholderia xenovorans (strain LB400)
GN=rpsB PE=3 SV=1
Length = 250
Score = 324 bits (831), Expect = 2e-87, Method: Composition-based stats.
Identities = 147/224 (65%), Positives = 188/224 (83%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAL 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G ++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 181 PVIAVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|B2T5J4|RS2_BURPP 30S ribosomal protein S2 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rpsB PE=3 SV=1
Length = 250
Score = 324 bits (830), Expect = 2e-87, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 188/224 (83%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAL 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G ++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL I
Sbjct: 121 EAGETERMSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 181 PVIAVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|Q0BE15|RS2_BURCM 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rpsB PE=3 SV=1
Length = 246
Score = 323 bits (828), Expect = 3e-87, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1YS74|RS2_BURA4 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain MC40-6)
GN=rpsB PE=3 SV=1
Length = 246
Score = 323 bits (828), Expect = 3e-87, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q47F92|RS2_DECAR 30S ribosomal protein S2 OS=Dechloromonas aromatica (strain RCB)
GN=rpsB PE=3 SV=1
Length = 248
Score = 323 bits (828), Expect = 4e-87, Method: Composition-based stats.
Identities = 148/225 (65%), Positives = 188/225 (83%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFW+PKM+ YIFG RNKIHI+NLEKTL Y +A+ ++ +L
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
S+GT+LFVGTKRQAR +I EA+RAG PF+DQRWLGG+LTNFKT+KTSI+RLK+M++ +
Sbjct: 61 SSRGTILFVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+ KKEAL F R+ KL + IGGIK M +PDAIF+IDVGYHK A++EA KL I
Sbjct: 121 EAGELEKMPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVDTNHSPDG+ YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 181 PVIGVVDTNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEGRS 225
>sp|Q21WY9|RS2_RHOFD 30S ribosomal protein S2 OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=rpsB PE=3 SV=1
Length = 250
Score = 323 bits (827), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 143/225 (63%), Positives = 188/225 (83%), Gaps = 1/225 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M+IT+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ Q+
Sbjct: 1 MAITMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVS 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+GT+L VGTKRQAR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M +
Sbjct: 61 ARRGTVLMVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + LSKKE L+F R+ KL R IGGI++M ++PDAIF+IDVG+HK A++EA KL I
Sbjct: 121 EAG-LDSLSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+I VVDTNHSP+GI+Y+IPGNDDS+K++ LY +GI DA ++ ++
Sbjct: 180 PLIAVVDTNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEGRS 224
>sp|Q12A31|RS2_POLSJ 30S ribosomal protein S2 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rpsB PE=3 SV=1
Length = 250
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 146/225 (64%), Positives = 186/225 (82%), Gaps = 1/225 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS ++REMLEAGVHFGHQTRFWNPKM+ YIFGHRN+IHIINLEK+L M++ A+++ QL
Sbjct: 1 MSTSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLS 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 61 ANRGTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L F R+ KL + IGGI++MN +PDAIF+IDVG+HK A+ EA KL I
Sbjct: 121 EAG-LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVD+NHSP GI+YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 180 PLIGVVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224
>sp|B4ECN1|RS2_BURCJ 30S ribosomal protein S2 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rpsB PE=3 SV=1
Length = 246
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|C5CKS0|RS2_VARPS 30S ribosomal protein S2 OS=Variovorax paradoxus (strain S110)
GN=rpsB PE=3 SV=1
Length = 250
Score = 322 bits (825), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 146/224 (65%), Positives = 185/224 (82%), Gaps = 1/224 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL
Sbjct: 1 MSTTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLT 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 61 ANRGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL I
Sbjct: 121 EAG-LDSLSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVD+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 180 PLIGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>sp|Q39F43|RS2_BURS3 30S ribosomal protein S2 OS=Burkholderia sp. (strain 383) GN=rpsB
PE=3 SV=1
Length = 246
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 ESGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A0K8E3|RS2_BURCH 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain
HI2424) GN=rpsB PE=3 SV=1
Length = 246
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 ESGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1JUF0|RS2_BURCC 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain MC0-3)
GN=rpsB PE=3 SV=1
Length = 246
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 ESGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q1BHI2|RS2_BURCA 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain AU
1054) GN=rpsB PE=3 SV=1
Length = 246
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 ESGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q2SWZ8|RS2_BURTA 30S ribosomal protein S2 OS=Burkholderia thailandensis (strain E264
/ ATCC 700388 / DSM 13276 / CIP 106301) GN=rpsB PE=3
SV=2
Length = 246
Score = 322 bits (824), Expect = 1e-86, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 189/224 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +
Sbjct: 121 EAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A4JF75|RS2_BURVG 30S ribosomal protein S2 OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=rpsB PE=3 SV=1
Length = 246
Score = 322 bits (824), Expect = 1e-86, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 188/224 (83%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL
Sbjct: 1 MAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ +
Sbjct: 61 ANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G K+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +
Sbjct: 121 EAGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGV 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 PVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A4SYV1|RS2_POLSQ 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rpsB PE=3 SV=1
Length = 249
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 184/225 (81%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+R+MLEAG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+
Sbjct: 1 MSVTMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M +
Sbjct: 61 SNRGTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G KLSKKEAL R KL + +GGI+++N +PDAIF++DVGYHK A++EA KL I
Sbjct: 121 EAGDWEKLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+I VVDTNHSP+G++Y+IPGNDDS+K++ LY +GI DA L+ K
Sbjct: 181 PVIAVVDTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKA 225
>sp|Q1H139|RS2_METFK 30S ribosomal protein S2 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rpsB PE=3 SV=1
Length = 249
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 181/224 (80%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+R+MLEAGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL ++E A++Y+ QL
Sbjct: 1 MSVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLS 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+KG +LFVGTKRQAR +I EA RAG P+++ RWLGG+LTNFKT+K SI+RL E + +
Sbjct: 61 ANKGRILFVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALL 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G I K KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GAV+EA KL I
Sbjct: 121 QDGGIEKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTN+SP+G+ YVIPGNDDS+++I LY +GI DA L+ +
Sbjct: 181 PVIGVVDTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>sp|Q5NZH5|RS2_AROAE 30S ribosomal protein S2 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsB PE=3 SV=1
Length = 251
Score = 319 bits (818), Expect = 5e-86, Method: Composition-based stats.
Identities = 143/225 (63%), Positives = 190/225 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ Y+ +L
Sbjct: 1 MTVTMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR +++ EA RAGMPF+D+RWLGG+LTNFKT+K SI+RLKEM+ +
Sbjct: 61 ANRGTILLVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+GSI +LSKKEAL+ R+ KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL I
Sbjct: 121 EDGSIERLSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
PI+ VVDTNHSP+GI+YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 181 PIVAVVDTNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|B1XTU3|RS2_POLNS 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rpsB PE=3 SV=1
Length = 249
Score = 318 bits (816), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 184/225 (81%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+R+MLEAG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+
Sbjct: 1 MSVTMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M++
Sbjct: 61 ANRGTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMEVAK 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G KLS+KEAL R KL + +GGIK++N IPDAIF++DVGYHK A++EA KL I
Sbjct: 121 EAGDWEKLSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+I VVDTNHSP+G++Y+IPGNDDS+K++ LY GI +A L+ K
Sbjct: 181 PVIAVVDTNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKA 225
>sp|A1K6S1|RS2_AZOSB 30S ribosomal protein S2 OS=Azoarcus sp. (strain BH72) GN=rpsB PE=3
SV=1
Length = 251
Score = 317 bits (811), Expect = 3e-85, Method: Composition-based stats.
Identities = 143/225 (63%), Positives = 190/225 (84%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
M++T+R+MLEAGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ ++ +L
Sbjct: 1 MTVTMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+LFV TKRQAR ++A EA RAGMP++D+RWLGG+LTNFKT+K SI+RLKE++ I
Sbjct: 61 ANRGTILFVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMI 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+GSI +LSK+EAL R+ KL + IGGIK+M +PDAIFIIDVGYHK AV+EA KL I
Sbjct: 121 EDGSIERLSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P++GVVDTNHSP+GI+Y+IPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 181 PVVGVVDTNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|B9MGL7|RS2_ACIET 30S ribosomal protein S2 OS=Acidovorax ebreus (strain TPSY) GN=rpsB
PE=3 SV=1
Length = 250
Score = 317 bits (811), Expect = 4e-85, Method: Composition-based stats.
Identities = 149/224 (66%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 61 ANRGTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL I
Sbjct: 121 EAG-LESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVD+NHSP+GI+YVIPGNDDSAK++ALY +GI DA LD +
Sbjct: 180 PLIGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGR 223
>sp|A1VN40|RS2_POLNA 30S ribosomal protein S2 OS=Polaromonas naphthalenivorans (strain
CJ2) GN=rpsB PE=3 SV=1
Length = 250
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 143/225 (63%), Positives = 183/225 (81%), Gaps = 1/225 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS +REMLEAGVHFGHQTRFW+PKM+ YIFGHRN+IHIINLEK+L M+++A+++ QL
Sbjct: 1 MSTNMREMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLT 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKR AR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 61 ANRGTILMVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK A+ EA KL I
Sbjct: 121 EAG-LDSISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 225
P+IGVVDTNHSP GI+YVIPGNDDS+K++ALY +GI DA ++ +
Sbjct: 180 PLIGVVDTNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRA 224
>sp|A1W918|RS2_ACISJ 30S ribosomal protein S2 OS=Acidovorax sp. (strain JS42) GN=rpsB
PE=3 SV=1
Length = 250
Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats.
Identities = 148/224 (66%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
++GT+L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 61 ANRGTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL I
Sbjct: 121 EAG-LESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVD+NHSP+GI+YVIPGNDDSAK++ALY +GI DA L+ +
Sbjct: 180 PLIGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGR 223
>sp|A9BMN2|RS2_DELAS 30S ribosomal protein S2 OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=rpsB PE=3 SV=1
Length = 250
Score = 313 bits (803), Expect = 3e-84, Method: Composition-based stats.
Identities = 147/224 (65%), Positives = 188/224 (83%), Gaps = 1/224 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+REMLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A +++ QL
Sbjct: 1 MSVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+ GT+L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 61 SNGGTILMVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQ 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G + +SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AV+EA KL I
Sbjct: 121 EAG-LEAMSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P++GVVD+NH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 180 PLVGVVDSNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>sp|Q7VYD0|RS2_BORPE 30S ribosomal protein S2 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=rpsB PE=3 SV=1
Length = 249
Score = 313 bits (801), Expect = 5e-84, Method: Composition-based stats.
Identities = 141/220 (64%), Positives = 183/220 (83%)
Query: 5 IREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKG 64
+REMLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G
Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGG 63
Query: 65 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 124
+LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 64 NILFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGG 123
Query: 125 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 184
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++
Sbjct: 124 FERMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVA 183
Query: 185 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
VVDTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 184 VVDTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WA60|RS2_BORPA 30S ribosomal protein S2 OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rpsB PE=3 SV=1
Length = 249
Score = 313 bits (801), Expect = 5e-84, Method: Composition-based stats.
Identities = 141/220 (64%), Positives = 183/220 (83%)
Query: 5 IREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKG 64
+REMLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G
Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGG 63
Query: 65 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 124
+LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 64 NILFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGG 123
Query: 125 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 184
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++
Sbjct: 124 FERMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVA 183
Query: 185 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
VVDTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 184 VVDTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WJ94|RS2_BORBR 30S ribosomal protein S2 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rpsB PE=3 SV=1
Length = 249
Score = 313 bits (801), Expect = 5e-84, Method: Composition-based stats.
Identities = 141/220 (64%), Positives = 183/220 (83%)
Query: 5 IREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKG 64
+REMLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G
Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGG 63
Query: 65 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 124
+LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 64 NILFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGG 123
Query: 125 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 184
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++
Sbjct: 124 FERMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVA 183
Query: 185 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
VVDTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 184 VVDTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q0AEH4|RS2_NITEC 30S ribosomal protein S2 OS=Nitrosomonas eutropha (strain C91)
GN=rpsB PE=3 SV=1
Length = 251
Score = 312 bits (799), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 137/224 (61%), Positives = 179/224 (79%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS+T+R+MLEAGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE TL M+ A+ Y +L
Sbjct: 1 MSVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+K T+LFVGTKRQAR ++ EA+R G P+++QRWLGG+LTNFKTI+ SI+RL++M+ +
Sbjct: 61 ANKETILFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
+G++ KL KKEAL F R+ KLN +GGIK M +PDA+F+IDVGY KG + EA KL I
Sbjct: 121 QDGTLNKLVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGI 180
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P++GVVDTNH+P GI YVIPGNDDS+++I LY + + DA L+ +
Sbjct: 181 PVVGVVDTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGR 224
>sp|B1XXJ5|RS2_LEPCP 30S ribosomal protein S2 OS=Leptothrix cholodnii (strain ATCC 51168
/ LMG 8142 / SP-6) GN=rpsB PE=3 SV=1
Length = 248
Score = 311 bits (796), Expect = 2e-83, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 185/224 (82%), Gaps = 1/224 (0%)
Query: 1 MSITIREMLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 60
MS T+REMLEAGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKT+ ++ +A +Y QL
Sbjct: 1 MSFTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLA 60
Query: 61 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 120
+GT+LFVGTKRQAR V+A EA RAGMPF++ RWLGG+LTNFKT+K S+++LKEM +
Sbjct: 61 GKRGTILFVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQV 120
Query: 121 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 180
G+ + KKEAL+F R+ KL + IGGI++MN +PDA+F+IDVG+HK A++EA KL I
Sbjct: 121 EAGT-QPAIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGI 179
Query: 181 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 224
P+IGVVDTNHSP GI+YVIPGNDDSAK++ALY + + DA ++ K
Sbjct: 180 PVIGVVDTNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGK 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 284,569,001
Number of Sequences: 539616
Number of extensions: 11978841
Number of successful extensions: 49475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 43405
Number of HSP's gapped (non-prelim): 3921
length of query: 844
length of database: 191,569,459
effective HSP length: 126
effective length of query: 718
effective length of database: 123,577,843
effective search space: 88728891274
effective search space used: 88728891274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)