BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3760
(306 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|399017224|ref|ZP_10719422.1| transcriptional regulator [Herbaspirillum sp. CF444]
gi|398104128|gb|EJL94282.1| transcriptional regulator [Herbaspirillum sp. CF444]
Length = 313
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 217/306 (70%), Positives = 269/306 (87%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+LRS+E+IMQE++GLK+IGKEF+A+D+G+ TIATTHTQARY+LPK+++ FT ++P
Sbjct: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQITEM+RNDQADIAI TE L+ + L+S+PCYQWE+V++VP +HPLL
Sbjct: 121 KVRLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPEHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++SL+EI+ YPLITYD +FSGR K+D FSL+ L P IVLE I++D+IKTYVEL MG+
Sbjct: 181 SKNLSLEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD +RD+ LRSI A HLFGT +SRV +KQG YLRSYVY+FI+LL+P LNRK I
Sbjct: 241 GIIAGMAFDGDRDRGLRSIPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLI 300
Query: 301 NKILNN 306
+++
Sbjct: 301 AQVMEG 306
>gi|300312397|ref|YP_003776489.1| cys regulon transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|409406827|ref|ZP_11255289.1| cys regulon transcription regulator protein [Herbaspirillum sp.
GW103]
gi|300075182|gb|ADJ64581.1| cys regulon transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|386435376|gb|EIJ48201.1| cys regulon transcription regulator protein [Herbaspirillum sp.
GW103]
Length = 313
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 217/306 (70%), Positives = 267/306 (87%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+LRS+E+IMQE++GLK+IGKEF+A+D+G+ TIATTHTQARYALPK+++ FT ++P
Sbjct: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSLLQGNPKQITEM+RNDQADIAI TE L+ + L+S+PCYQWE+V++VP DHPLL
Sbjct: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L+EI+ PLITYD +FSGR K+D FSL++L P +VLE I++D+IKTYVEL MG+
Sbjct: 181 SKSLTLEEIAANPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA IAFD+ RD+ LR+I A HLFGT +SRV +KQG YLR YVY+FI+LL+P LNRK I
Sbjct: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLI 300
Query: 301 NKILNN 306
+++
Sbjct: 301 AQVMEG 306
>gi|415948476|ref|ZP_11556747.1| HTH-type transcriptional regulator [Herbaspirillum frisingense
GSF30]
gi|407757891|gb|EKF67797.1| HTH-type transcriptional regulator [Herbaspirillum frisingense
GSF30]
Length = 313
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 216/306 (70%), Positives = 267/306 (87%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+LRS+E+IMQE++GLK+IGKEF+A+D+G+ TIATTHTQARYALPK+++ FT ++P
Sbjct: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSLLQGNPKQITEM+RNDQADIAI TE L+ + L+S+PCYQWE+V++VP +HPLL
Sbjct: 121 KVHLSLLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPEHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L+EI+ PLITYD +FSGR K+D FSL++L P +VLE I++D+IKTYVEL MG+
Sbjct: 181 SRSLTLEEIATNPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA IAFD+ RD+ LR+I A HLFGT +SRV +KQG YLR YVY+FI+LL+P LNRK I
Sbjct: 241 GIIAGIAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLI 300
Query: 301 NKILNN 306
+++
Sbjct: 301 AQVMEG 306
>gi|398832713|ref|ZP_10590869.1| transcriptional regulator [Herbaspirillum sp. YR522]
gi|398222870|gb|EJN09229.1| transcriptional regulator [Herbaspirillum sp. YR522]
Length = 313
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/306 (69%), Positives = 266/306 (86%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+LRS+E+IMQE++GLK+IGKEF+A+D+G+ TIATTHTQARYALPK+++ FT ++P
Sbjct: 61 EPGRAVLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSLLQGNP+QITEM+RNDQADIAI TE L+ D L+S+PCYQWE+V++VP DHPLL
Sbjct: 121 KVHLSLLQGNPRQITEMVRNDQADIAIATEALTAIDGLVSLPCYQWEHVVVVPPDHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI++ PLITYD +F+GR K+D F L+ L P IVLE I++D+IKTYVEL MG+
Sbjct: 181 SKNLTLEEIASNPLITYDAAFTGRSKIDHAFGLRNLKPDIVLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA IAFD+ RD+ LR++ A HLFGT +SRV +KQG YLR YVY+FI+LL+P LNRK I
Sbjct: 241 GIIAGIAFDAERDRGLRALPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLI 300
Query: 301 NKILNN 306
+++
Sbjct: 301 AQVMEG 306
>gi|340788687|ref|YP_004754152.1| regulatory protein CysB [Collimonas fungivorans Ter331]
gi|340553954|gb|AEK63329.1| Regulatory protein CysB [Collimonas fungivorans Ter331]
Length = 313
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 208/306 (67%), Positives = 265/306 (86%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+LRS+E+IMQEI+GLK+IG E++A+D+G+ TIATTHTQARYALPK+++ FT +FP
Sbjct: 61 EPGRAVLRSVELIMQEIDGLKRIGNEYAAHDSGSFTIATTHTQARYALPKVVQAFTQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQ+ +M+RNDQAD+A+ TE + +D L+++PCYQWE+V++VP DHPLL
Sbjct: 121 KVRLSLLQGNPKQVADMVRNDQADLALATEAIVNADGLVTLPCYQWEHVVVVPPDHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+EI+ +PLITYD +F+GR K+D FSL+ L P ++LE I++D+IKTYVEL MG+
Sbjct: 181 SKAITLEEIAAFPLITYDSAFTGRTKIDHAFSLRNLKPDVLLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD+ RD LRSI HLFGT ISR +KQG YLRSYVY+FI+LL+P +NRK I
Sbjct: 241 GIIAGMAFDAERDTGLRSIPVGHLFGTNISRAAVKQGAYLRSYVYTFIELLAPTMNRKLI 300
Query: 301 NKILNN 306
+++N
Sbjct: 301 EQVMNG 306
>gi|152980807|ref|YP_001354140.1| transcriptional regulator CysB-like protein [Janthinobacterium sp.
Marseille]
gi|151280884|gb|ABR89294.1| cys regulon transcriptionnal regulator protein [Janthinobacterium
sp. Marseille]
Length = 313
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 209/306 (68%), Positives = 266/306 (86%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEEELGVDIFSRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L+S+E+IMQEI+GLK+IG EF+A+D+G+ TIATTHTQARY+LPK+++ FT +FP
Sbjct: 61 EPGRAVLKSVELIMQEIDGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQ+ +M+ DQAD+AI TE ++ + LIS+PCYQWE+ ++VP+DHPLL
Sbjct: 121 KVRLSLLQGNPKQVADMVLMDQADLAIATESIASIEGLISLPCYQWEHQVVVPVDHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI+L+E++ YPLITYD +F+GR K+D F+L+ L P I+LE I++D+IKTYVEL MGI
Sbjct: 181 SKSITLEELTAYPLITYDSAFAGRNKIDHAFALRNLKPDILLEAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD+ RDKNLR+I A HLFGT +SRV +KQG YLRSYV++FI+LL+P LNRK +
Sbjct: 241 GIIAGMAFDAERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLV 300
Query: 301 NKILNN 306
++LN
Sbjct: 301 EQVLNG 306
>gi|134095567|ref|YP_001100642.1| transcriptional regulator CysB-like protein [Herminiimonas
arsenicoxydans]
gi|133739470|emb|CAL62521.1| HTH-type transcriptional regulator cysB (Cys regulon
transcriptional activator) [Herminiimonas
arsenicoxydans]
Length = 313
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 211/306 (68%), Positives = 264/306 (86%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEEELGVDIFSRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L+S+E IM EIEGLK+IG EF+A+D+G+ TIATTHTQARY+LPK+++ FT +FP
Sbjct: 61 EPGRAVLKSVEAIMLEIEGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQI EM+ DQAD+AI TE ++ D LIS+PCYQWE+ I++PLDHPLL
Sbjct: 121 KVRLSLLQGNPKQIAEMVLMDQADLAIATEAIANMDGLISLPCYQWEHQIVLPLDHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI+L+E++ YP+ITYD +F+GR K+D F+L+ L P I+LE I++D+IKTYVEL MGI
Sbjct: 181 SKSITLEELAAYPIITYDSAFAGRNKIDHAFNLRNLKPDILLEAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD+ RDKNLR+I A HLFGT +SRV +KQG YLRSYV++FI+LL+P LNRK +
Sbjct: 241 GIIAGMAFDTERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLV 300
Query: 301 NKILNN 306
++L+
Sbjct: 301 EQVLSG 306
>gi|329903700|ref|ZP_08273585.1| Regulatory protein CysB [Oxalobacteraceae bacterium IMCC9480]
gi|327548248|gb|EGF32946.1| Regulatory protein CysB [Oxalobacteraceae bacterium IMCC9480]
Length = 313
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 203/306 (66%), Positives = 263/306 (85%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALFTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L+++E+IMQEI+ LK IGKEF+A+D+G+ TIATTHTQARYALPK+++ FT +FP
Sbjct: 61 EPGRAVLKAVEVIMQEIDSLKSIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQ+ +++ + ADIA+ TE ++ L+SIPCYQWE+V++VP +HPLL
Sbjct: 121 KVRLSLLQGNPKQVADLVLSGHADIALATESITTVAGLVSIPCYQWEHVVVVPPEHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L EI+ YPLITYD +F+GR K+D F L+ L P ++LE I++D+IKTYVEL +G+
Sbjct: 181 SKSLTLDEIAAYPLITYDSAFTGRAKIDHAFQLRNLKPDVLLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A+D++RDKNLR ISA HLFGT +SRV +KQG YLRSYVY+FI+LL+P LNRK I
Sbjct: 241 GIIAGMAYDADRDKNLRMISAGHLFGTNVSRVALKQGAYLRSYVYTFIELLTPTLNRKLI 300
Query: 301 NKILNN 306
++++
Sbjct: 301 EQVMSG 306
>gi|395761411|ref|ZP_10442080.1| transcriptional regulator CysB-like protein [Janthinobacterium
lividum PAMC 25724]
Length = 313
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 201/306 (65%), Positives = 259/306 (84%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQN+NLT+AAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNYNLTDAAKALFTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L S+E+IMQEI+ +K+IGKEF+A D+G+ TIATTHTQARY LPK+++ F ++FP
Sbjct: 61 EPGRLVLESVELIMQEIDSMKRIGKEFAAQDSGSFTIATTHTQARYTLPKVVQAFMLKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNP+QI EM++ DQAD+AI TE ++ D LI++PCYQWE+V++VPLDHPLL
Sbjct: 121 KVRLSLLQGNPRQIAEMVQRDQADLAIATESIAAIDGLITLPCYQWEHVVVVPLDHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L+EI+ +PLITYD +F+GR K+D F L+ L P ++LE I++D+IKTYVEL MGI
Sbjct: 181 SKSVTLEEIAAFPLITYDSAFAGRNKIDHAFVLRGLKPDVLLEAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD+ RDK LR+I HLFG +SRV +KQG YLRSY+Y+FI+LL+P LNRK I
Sbjct: 241 GIIAGMAFDAERDKGLRAIPVGHLFGMNVSRVAVKQGAYLRSYIYTFIELLTPTLNRKLI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|427403367|ref|ZP_18894364.1| hypothetical protein HMPREF9710_03960 [Massilia timonae CCUG 45783]
gi|425717838|gb|EKU80793.1| hypothetical protein HMPREF9710_03960 [Massilia timonae CCUG 45783]
Length = 312
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 255/306 (83%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQN+NLT+AAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNYNLTDAAKALFTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L+S+E+IMQEI+ LK+IGKE++A+D+G+ TIATTHTQARY LPK+++ F ++P
Sbjct: 61 EPGRLVLQSVELIMQEIDSLKRIGKEYAAHDSGSFTIATTHTQARYMLPKVVQGFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNPKQI +M++NDQAD+AI TE ++ + LI++P YQWE+V++ P DHPL
Sbjct: 121 KVRLSLLQGNPKQIADMVKNDQADLAIATESITAVEGLITLPAYQWEHVVVAPPDHPLFK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ISL+EI++YP+ITYD +F+GR K+D F L+ L P ++LE I++D+IKTYVEL MG+
Sbjct: 181 SRAISLEEIASYPVITYDAAFAGRSKIDHAFGLRNLKPDVLLEAIDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD RD+NLR++ HLFG SRV IKQG YLRSY+Y+FI+LL+P LNRK +
Sbjct: 241 GIIAGMAFDPERDRNLRALPVGHLFGMNTSRVAIKQGAYLRSYIYTFIELLTPTLNRKMV 300
Query: 301 NKILNN 306
+
Sbjct: 301 ESAMRG 306
>gi|445495661|ref|ZP_21462705.1| transcriptional regulator LysR family [Janthinobacterium sp. HH01]
gi|444791822|gb|ELX13369.1| transcriptional regulator LysR family [Janthinobacterium sp. HH01]
Length = 313
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/306 (64%), Positives = 256/306 (83%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQN+NLT+AAKAL+TSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNYNLTDAAKALFTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L S+E+IMQEI+ LK+IGKE++A D+G+ TIATTHTQARY LPK+++ F ++FP
Sbjct: 61 EPGRLVLESVELIMQEIDSLKRIGKEYAAQDSGSFTIATTHTQARYTLPKVVQAFMLKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQGNP+QI EM++ DQAD+AI TE ++ LI++PCYQWE+V++V DHPLL
Sbjct: 121 KVRLSLLQGNPQQIAEMVQRDQADLAIATESIAGVTGLITLPCYQWEHVVVVAPDHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+EI+ +P+ITYD +F+GR K+D FSL+ L ++LE I++D+IKTYVEL MGI
Sbjct: 181 SKQVTLEEIAAFPIITYDGAFAGRSKIDHAFSLRGLKLDVLLEAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD+ RDKNLR+I HLFG +SRV +KQG YLRSY+Y+FI+LL+P LNRK I
Sbjct: 241 GIIAGMAFDAERDKNLRAIPVGHLFGMNVSRVAVKQGAYLRSYIYTFIELLAPTLNRKLI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|374368132|ref|ZP_09626186.1| transcriptional regulator CysB-like protein [Cupriavidus basilensis
OR16]
gi|373100296|gb|EHP41363.1| transcriptional regulator CysB-like protein [Cupriavidus basilensis
OR16]
Length = 313
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 250/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILESVEKILQEVESLKRVGKDYAAQDQGNFTIATTHTQARYALPRVIAEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +D ADI I TE +S LIS+P YQW++VI++P DHPLL
Sbjct: 121 KVRLSIQQGNPTQIADMVLHDHADIGIATEGISADKNLISLPGYQWQHVIVMPPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ YPLITYD +F+GR K+D+ F L+ L P I+LE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLALEDLMGYPLITYDPNFAGRPKIDKAFELRHLKPDIILEAIDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ RD+NLR I A HLFGT ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGVAFDAERDRNLRGIPAGHLFGTNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|94311750|ref|YP_584960.1| transcriptional regulator CysB-like protein [Cupriavidus
metallidurans CH34]
gi|93355602|gb|ABF09691.1| DNA-binding protein transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Cupriavidus
metallidurans CH34]
Length = 313
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 190/306 (62%), Positives = 251/306 (82%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILTSVEKILQEVESLKRVGKDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +MI +DQAD+ I TE +S L+S+P YQW++++I P DHPLL
Sbjct: 121 KVRLSIQQGNPAQIADMILHDQADLGIATEGISGDKSLVSLPGYQWQHMVITPPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ +PLITYD++F+GR K+D+ F L+ L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLTLEDLATFPLITYDVNFAGRPKIDKAFELRHLQPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D RD+NLR I A HLFGT ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGLAYDPERDRNLRGIPAGHLFGTNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|430806377|ref|ZP_19433492.1| transcriptional regulator CysB-like protein [Cupriavidus sp. HMR-1]
gi|429501395|gb|EKZ99732.1| transcriptional regulator CysB-like protein [Cupriavidus sp. HMR-1]
Length = 313
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 251/306 (82%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILTSVEKILQEVESLKRVGKDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +MI +DQAD+ I TE +S L+S+P YQW++++I P DHPLL
Sbjct: 121 KVRLSIQQGNPAQIADMILHDQADLGIATEGISGDKSLVSLPGYQWQHMVITPPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ +PLITYD++F+GR K+D+ F L+ L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLTLEDLATFPLITYDVNFAGRPKIDKAFELRHLQPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D RD+NLR + A HLFGT ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGLAYDPERDRNLRGLPAGHLFGTNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|299065977|emb|CBJ37158.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia solanacearum CMR15]
Length = 313
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE+E LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVETLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVTPADHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L++L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQLKPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGLAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|17547146|ref|NP_520548.1| CysB family transcriptional regulator [Ralstonia solanacearum
GMI1000]
gi|386332691|ref|YP_006028860.1| transcriptional regulator CysB-like protein [Ralstonia solanacearum
Po82]
gi|421891072|ref|ZP_16321900.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia solanacearum K60-1]
gi|17429448|emb|CAD16134.1| putative cys regulon transcriptional activator-related
transcription regulator protein [Ralstonia solanacearum
GMI1000]
gi|334195139|gb|AEG68324.1| transcriptional regulator CysB-like protein [Ralstonia solanacearum
Po82]
gi|378963570|emb|CCF98648.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia solanacearum K60-1]
Length = 313
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE++ LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVDTLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVTPADHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L++L P IVLE I++D+IKTYVE+ +GI
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQLKPDIVLEAIDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|300703326|ref|YP_003744928.1| LysR family transcriptional regulator [Ralstonia solanacearum
CFBP2957]
gi|421895417|ref|ZP_16325819.1| cys regulon transcriptional activator-related protein [Ralstonia
solanacearum MolK2]
gi|206586582|emb|CAQ17169.1| cys regulon transcriptional activator-related protein [Ralstonia
solanacearum MolK2]
gi|299070989|emb|CBJ42298.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia solanacearum CFBP2957]
Length = 313
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE++ LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVDTLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVTPADHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L++L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQLKPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|421747796|ref|ZP_16185468.1| transcriptional regulator CysB-like protein [Cupriavidus necator
HPC(L)]
gi|409773544|gb|EKN55322.1| transcriptional regulator CysB-like protein [Cupriavidus necator
HPC(L)]
Length = 313
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 248/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILTSVEKILQEVESLKRVGKDYAAQDQGNFTIATTHTQARYALPRVIGEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +DQAD+ I TE +S L+S+P YQW++ I+ P DHPLL
Sbjct: 121 KVRLSIQQGNPAQIADMVLHDQADLGIATEGISGDKNLVSLPGYQWQHTIVTPPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL+++ YP++TYD +F+GR K+D+ F L+ L P IVLE I++D+IKTYVE+ +GI
Sbjct: 181 KPHLSLEDLIGYPIVTYDPNFAGRPKIDKAFELRHLQPDIVLEAIDADVIKTYVEIGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR I A HLFGT ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGVAFDPERDRNLRGIPAGHLFGTNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|83746678|ref|ZP_00943727.1| Cys regulon transcriptional activator [Ralstonia solanacearum
UW551]
gi|207742597|ref|YP_002258989.1| cys regulon transcriptional activator-related protein [Ralstonia
solanacearum IPO1609]
gi|83726631|gb|EAP73760.1| Cys regulon transcriptional activator [Ralstonia solanacearum
UW551]
gi|206593991|emb|CAQ60918.1| cys regulon transcriptional activator-related protein [Ralstonia
solanacearum IPO1609]
Length = 313
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE++ LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVDTLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVTPADHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L+++ P IVLE I++D+IKTYVE+ +GI
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQIKPDIVLEAIDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|393777529|ref|ZP_10365820.1| transcriptional regulator CysB-like protein [Ralstonia sp. PBA]
gi|392715326|gb|EIZ02909.1| transcriptional regulator CysB-like protein [Ralstonia sp. PBA]
Length = 313
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 249/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRF+REAVRQNFNLTEAAKAL+TSQPGVSKAIIELEEEL +D+F RHGKRIR LT
Sbjct: 1 MNLHQFRFLREAVRQNFNLTEAAKALHTSQPGVSKAIIELEEELGVDVFTRHGKRIRNLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ IL S+E I+QE+E LK++GK+++A D GNL IATTHTQARYALP +I EFT ++P
Sbjct: 61 EPGQRILASVEKILQEVESLKRVGKDYAAQDQGNLVIATTHTQARYALPSVIAEFTKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ DQAD+AI TE + LI++P YQW++V++ P HPLL
Sbjct: 121 KVRLSIQQGNPAQIADMVVRDQADLAIATEGIVHLKDLITLPSYQWQHVVVTPPGHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ YP+ITYD F+GR K+D+ F+L++L P IVLE I++D+IKTYVE+ MGI
Sbjct: 181 KKHVTLEDLAAYPIITYDAHFAGRPKIDKAFALRQLQPDIVLEAIDADVIKTYVEVGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ RD+NLRS+ HLFGT ++ + IKQG YLRS+VY+FI+L SP LNRK I
Sbjct: 241 GIVAGVAFDAARDQNLRSVPVGHLFGTNVTHLAIKQGAYLRSFVYTFIELFSPTLNRKLI 300
Query: 301 NKIL 304
+++
Sbjct: 301 EQLM 304
>gi|194290562|ref|YP_002006469.1| transcriptional regulator cysb-like protein [Cupriavidus
taiwanensis LMG 19424]
gi|193224397|emb|CAQ70408.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Cupriavidus taiwanensis LMG 19424]
Length = 313
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 250/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++G +++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILSSVEKILQEVESLKRVGMDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +DQADI I TE +S L+S+P YQW +++I P +HPLL
Sbjct: 121 KVRLSIQQGNPAQIADMLLHDQADIGIATEGISSDKNLVSLPGYQWTHMVITPPEHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ YPLITYD +F+GR K+D+ F+L+ L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLALEDLMGYPLITYDANFAGRTKIDKAFALRHLAPDIVLEAIDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D+ RD+NLR I+A HLFG+ ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGVAYDAERDRNLRGIAAGHLFGSNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|241663817|ref|YP_002982177.1| CysB family transcriptional regulator [Ralstonia pickettii 12D]
gi|240865844|gb|ACS63505.1| transcriptional regulator, LysR family [Ralstonia pickettii 12D]
Length = 313
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E +++E+E LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLEEVETLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +DQADIAI TE +S LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDQADIAIATEGMSHVKDLISIPGYQWQHVVVTPPDHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ YP+ITYD F+GR K+D F L+++ P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 RQHLTLDDLKGYPIITYDHHFAGRPKIDHAFELRQIKPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ RD+NLR+I A HLFGT ++ + +KQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDAERDRNLRAIPAGHLFGTNVTHLGVKQGAYLRGFVYTFIELFAPTLTRKLV 300
Query: 301 NKILNN 306
++++
Sbjct: 301 EQLMSG 306
>gi|300690708|ref|YP_003751703.1| biosynthesis of L-cysteine and regulator of sulfur assimilation
LysR family transcriptional regulator [Ralstonia
solanacearum PSI07]
gi|299077768|emb|CBJ50406.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia solanacearum PSI07]
gi|344170238|emb|CCA82637.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family) [blood
disease bacterium R229]
Length = 313
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE++ LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVDTLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVTPSDHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L+++ P IVLE I++D+IKTYVE+ +GI
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQIKPDIVLEAIDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|344172125|emb|CCA84753.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR family)
[Ralstonia syzygii R24]
Length = 313
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/304 (63%), Positives = 247/304 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E ++QE++ LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLQEVDTLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +D+ADIAI TE LS LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDRADIAIATEGLSQIKDLISIPGYQWQHVVVAPPDHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ NYP+ITYD F+GR K+D F L+++ P IVLE I++D+IKTYVE+ +GI
Sbjct: 181 RQHLTLEDLKNYPIITYDQHFAGRPKIDHAFELRQIKPDIVLEAIDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RD+NLR+I A HLFGT ++ + IKQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDPERDRNLRAIPAGHLFGTNVTHLGIKQGAYLRGFVYTFIELFAPALTRKLL 300
Query: 301 NKIL 304
++L
Sbjct: 301 EQLL 304
>gi|167561894|ref|ZP_02354810.1| transcriptional regulator CysB-like protein [Burkholderia
oklahomensis EO147]
gi|167569145|ref|ZP_02362019.1| transcriptional regulator CysB-like protein [Burkholderia
oklahomensis C6786]
Length = 313
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 248/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + ++VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADVAIATEAIADYKELVSLPCFQWHHAVVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ +PLITYD +F+GR K+++ F+L +LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPLSLDDLAQFPLITYDDAFAGRKKINQAFALHRLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR+I HLFG+ ++RV +KQG YLR Y+Y+ ++LLSP LNRK +
Sbjct: 241 GIMADIAFNPERDRNLRAIPVGHLFGSNVTRVALKQGAYLRGYIYTLVELLSPTLNRKLV 300
Query: 301 NKILNN 306
L
Sbjct: 301 ETALKG 306
>gi|187929762|ref|YP_001900249.1| transcriptional regulator CysB-like protein [Ralstonia pickettii
12J]
gi|309781522|ref|ZP_07676258.1| non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
[Ralstonia sp. 5_7_47FAA]
gi|404396817|ref|ZP_10988611.1| hypothetical protein HMPREF0989_01097 [Ralstonia sp. 5_2_56FAA]
gi|187726652|gb|ACD27817.1| transcriptional regulator, LysR family [Ralstonia pickettii 12J]
gi|308919935|gb|EFP65596.1| non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
[Ralstonia sp. 5_7_47FAA]
gi|348616918|gb|EGY66410.1| hypothetical protein HMPREF0989_01097 [Ralstonia sp. 5_2_56FAA]
Length = 313
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQ FNLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQFRFVREAVRQKFNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E +++E+E LK++GK+++A D GN TIATTHTQARYALPK I EFT ++P
Sbjct: 61 EPGRRILASVERVLEEVETLKRVGKDYAAQDQGNFTIATTHTQARYALPKAIAEFTRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG P QI EM+ +DQAD+AI TE +S LISIP YQW++V++ P DHPLL
Sbjct: 121 KVRLSIQQGTPAQIAEMVLHDQADLAIATEGMSHVKDLISIPGYQWQHVVVTPPDHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ YP+ITYD F+GR K+D F L+++ P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 RQHLTLDDLKGYPIITYDHHFAGRPKIDHAFELRQIKPDIVLEAIDADVIKTYVEVGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ RD+NLR+I A HLFGT ++ + +KQG YLR +VY+FI+L +P L RK +
Sbjct: 241 GIVAGVAFDAERDRNLRAIPAGHLFGTNVTHLGVKQGAYLRGFVYTFIELFAPTLTRKLV 300
Query: 301 NKILNN 306
++++
Sbjct: 301 EQLMSG 306
>gi|53718597|ref|YP_107583.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei K96243]
gi|53725628|ref|YP_102437.1| transcriptional regulator CysB-like protein [Burkholderia mallei
ATCC 23344]
gi|67640806|ref|ZP_00439600.1| HTH-type transcriptional regulator cbl [Burkholderia mallei GB8
horse 4]
gi|76811055|ref|YP_332576.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1710b]
gi|121599695|ref|YP_993658.1| transcriptional regulator CysB-like protein [Burkholderia mallei
SAVP1]
gi|124385059|ref|YP_001028880.1| transcriptional regulator CysB-like protein [Burkholderia mallei
NCTC 10229]
gi|126441724|ref|YP_001058055.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 668]
gi|126448088|ref|YP_001081207.1| transcriptional regulator CysB-like protein [Burkholderia mallei
NCTC 10247]
gi|126453673|ref|YP_001065292.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1106a]
gi|134281326|ref|ZP_01768035.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 305]
gi|167003630|ref|ZP_02269416.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
PRL-20]
gi|167718513|ref|ZP_02401749.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei DM98]
gi|167737545|ref|ZP_02410319.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 14]
gi|167814680|ref|ZP_02446360.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 91]
gi|167823133|ref|ZP_02454604.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 9]
gi|167844694|ref|ZP_02470202.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei B7210]
gi|167893232|ref|ZP_02480634.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 7894]
gi|167901676|ref|ZP_02488881.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei NCTC 13177]
gi|167909927|ref|ZP_02497018.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 112]
gi|167917963|ref|ZP_02505054.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BCC215]
gi|217419965|ref|ZP_03451471.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 576]
gi|226194444|ref|ZP_03790042.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei Pakistan 9]
gi|237811272|ref|YP_002895723.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei MSHR346]
gi|242317226|ref|ZP_04816242.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1106b]
gi|254178472|ref|ZP_04885127.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
ATCC 10399]
gi|254181449|ref|ZP_04888046.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1655]
gi|254190848|ref|ZP_04897355.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei Pasteur 52237]
gi|254196249|ref|ZP_04902673.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei S13]
gi|254199339|ref|ZP_04905705.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
FMH]
gi|254205655|ref|ZP_04912007.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
JHU]
gi|254258520|ref|ZP_04949574.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1710a]
gi|254357813|ref|ZP_04974086.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
2002721280]
gi|386862630|ref|YP_006275579.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026b]
gi|403517665|ref|YP_006651798.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BPC006]
gi|418397835|ref|ZP_12971492.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354a]
gi|418538267|ref|ZP_13103895.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026a]
gi|418541695|ref|ZP_13107166.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258a]
gi|418548025|ref|ZP_13113153.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258b]
gi|418554156|ref|ZP_13118952.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354e]
gi|52209011|emb|CAH34951.1| cys regulon transcriptional activator [Burkholderia pseudomallei
K96243]
gi|52429051|gb|AAU49644.1| cys regulon transcriptional activator [Burkholderia mallei ATCC
23344]
gi|76580508|gb|ABA49983.1| cys regulon transcriptional activator [Burkholderia pseudomallei
1710b]
gi|121228505|gb|ABM51023.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
SAVP1]
gi|124293079|gb|ABN02348.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
NCTC 10229]
gi|126221217|gb|ABN84723.1| cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 668]
gi|126227315|gb|ABN90855.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1106a]
gi|126240958|gb|ABO04051.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
NCTC 10247]
gi|134247632|gb|EBA47717.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 305]
gi|147748935|gb|EDK56009.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
FMH]
gi|147753098|gb|EDK60163.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
JHU]
gi|148026940|gb|EDK84961.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
2002721280]
gi|157938523|gb|EDO94193.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei Pasteur 52237]
gi|160699511|gb|EDP89481.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
ATCC 10399]
gi|169652992|gb|EDS85685.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei S13]
gi|184211987|gb|EDU09030.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1655]
gi|217397269|gb|EEC37285.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 576]
gi|225933529|gb|EEH29518.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei Pakistan 9]
gi|237505482|gb|ACQ97800.1| HTH-type transcriptional regulator cbl [Burkholderia pseudomallei
MSHR346]
gi|238521601|gb|EEP85051.1| HTH-type transcriptional regulator cbl [Burkholderia mallei GB8
horse 4]
gi|242140465|gb|EES26867.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1106b]
gi|243060856|gb|EES43042.1| Cys regulon transcriptional activator CysB [Burkholderia mallei
PRL-20]
gi|254217209|gb|EET06593.1| Cys regulon transcriptional activator CysB [Burkholderia
pseudomallei 1710a]
gi|385349027|gb|EIF55623.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026a]
gi|385357326|gb|EIF63389.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258a]
gi|385359010|gb|EIF64989.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258b]
gi|385367672|gb|EIF73166.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354a]
gi|385370650|gb|EIF75884.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354e]
gi|385659758|gb|AFI67181.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026b]
gi|403073308|gb|AFR14888.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BPC006]
Length = 313
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 248/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ +PLITYD +F+GR K+++ F+L +LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPLSLDDLAQFPLITYDDAFAGRKKINQAFALHRLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR+I+ HLFG+ ++RV +KQG YLR Y+Y+ ++LLSP LNRK +
Sbjct: 241 GIMADIAFNPERDRNLRAIAVGHLFGSNVTRVALKQGAYLRGYIYTLVELLSPTLNRKLV 300
Query: 301 NKILNN 306
L
Sbjct: 301 ETALKG 306
>gi|134296655|ref|YP_001120390.1| transcriptional regulator CysB-like protein [Burkholderia
vietnamiensis G4]
gi|134139812|gb|ABO55555.1| transcriptional regulator, LysR family [Burkholderia vietnamiensis
G4]
Length = 313
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAISDYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPITLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|402565748|ref|YP_006615093.1| transcriptional regulator CysB-like protein [Burkholderia cepacia
GG4]
gi|402246945|gb|AFQ47399.1| transcriptional regulator CysB-like protein [Burkholderia cepacia
GG4]
Length = 313
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/306 (62%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAISDYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|387902999|ref|YP_006333338.1| cys regulon transcriptional activator CysB [Burkholderia sp. KJ006]
gi|387577891|gb|AFJ86607.1| Cys regulon transcriptional activator CysB [Burkholderia sp. KJ006]
Length = 313
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAISDYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPITLDDLAQYPLITYDNAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|167835775|ref|ZP_02462658.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
gi|424902471|ref|ZP_18325987.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
gi|390932846|gb|EIP90246.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
Length = 313
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ +PLITYD +F+GR K+++ F+L +LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPLSLDDLAQFPLITYDDAFAGRKKINQAFALHRLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR+I HLFG+ ++RV +KQG YLR Y+Y+ ++LLSP LNRK +
Sbjct: 241 GIMADIAFNPERDRNLRAIPVGHLFGSNVTRVALKQGAYLRGYIYTLVELLSPTLNRKLV 300
Query: 301 NKILNN 306
L
Sbjct: 301 ETALKG 306
>gi|115352576|ref|YP_774415.1| transcriptional regulator CysB-like protein [Burkholderia ambifaria
AMMD]
gi|170697662|ref|ZP_02888750.1| transcriptional regulator, LysR family [Burkholderia ambifaria
IOP40-10]
gi|172061435|ref|YP_001809087.1| transcriptional regulator CysB-like protein [Burkholderia ambifaria
MC40-6]
gi|115282564|gb|ABI88081.1| transcriptional regulator, LysR family [Burkholderia ambifaria
AMMD]
gi|170137410|gb|EDT05650.1| transcriptional regulator, LysR family [Burkholderia ambifaria
IOP40-10]
gi|171993952|gb|ACB64871.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MC40-6]
Length = 313
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|416919210|ref|ZP_11932514.1| transcriptional regulator CysB-like protein [Burkholderia sp.
TJI49]
gi|325527094|gb|EGD04511.1| transcriptional regulator CysB-like protein [Burkholderia sp.
TJI49]
Length = 313
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|83721634|ref|YP_441369.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis E264]
gi|167580128|ref|ZP_02373002.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis TXDOH]
gi|167618234|ref|ZP_02386865.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis Bt4]
gi|257139958|ref|ZP_05588220.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis E264]
gi|83655459|gb|ABC39522.1| cys regulon transcriptional activator [Burkholderia thailandensis
E264]
Length = 313
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHTAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ +PLITYD +F+GR K+++ F+L +LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPLSLDDLAQFPLITYDDAFAGRKKINQAFALHRLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AF+ RD+NLR+I HLFG+ ++RV +KQG YLR Y+Y+ ++LLSP LNRK +
Sbjct: 241 GILADVAFNPERDRNLRAIPVGHLFGSNVTRVALKQGAYLRGYIYTLVELLSPTLNRKLV 300
Query: 301 NKILNN 306
L
Sbjct: 301 ETALKG 306
>gi|73542383|ref|YP_296903.1| transcriptional regulator CysB-like protein [Ralstonia eutropha
JMP134]
gi|72119796|gb|AAZ62059.1| transcriptional regulator, LysR family [Ralstonia eutropha JMP134]
Length = 313
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 250/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++G +++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILNSVEKILQEVESLKRVGMDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +DQADI I TE ++ L+S+P YQW++V+I P DHPLL
Sbjct: 121 KVRLSIQQGNPSQIADMLLHDQADIGIATEGITHEKTLVSLPGYQWQHVVITPPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ +YPLITYD +F+GR K+++ F L+ L P I+LE I++D+IKTYVE+ +GI
Sbjct: 181 KKHLALEDLMSYPLITYDPNFAGRPKINKAFELRHLQPDIILEAIDADVIKTYVEIGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D+ RD+NLR I A HLFGT ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGLAYDAERDRNLRGIPAGHLFGTNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|107023414|ref|YP_621741.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia AU 1054]
gi|116690496|ref|YP_836119.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia HI2424]
gi|170733817|ref|YP_001765764.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia MC0-3]
gi|206561024|ref|YP_002231789.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia J2315]
gi|254247462|ref|ZP_04940783.1| Transcriptional regulator [Burkholderia cenocepacia PC184]
gi|421866488|ref|ZP_16298155.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
H111]
gi|444359546|ref|ZP_21160852.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia BC7]
gi|444368177|ref|ZP_21168036.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia K56-2Valvano]
gi|105893603|gb|ABF76768.1| transcriptional regulator, LysR family [Burkholderia cenocepacia AU
1054]
gi|116648585|gb|ABK09226.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
HI2424]
gi|124872238|gb|EAY63954.1| Transcriptional regulator [Burkholderia cenocepacia PC184]
gi|169817059|gb|ACA91642.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
MC0-3]
gi|198037066|emb|CAR52987.1| cys regulon transcriptional activator CysB [Burkholderia
cenocepacia J2315]
gi|358073513|emb|CCE49033.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
H111]
gi|443601306|gb|ELT69452.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443601829|gb|ELT69948.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia BC7]
Length = 313
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAISDYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+ LR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRGLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|330818028|ref|YP_004361733.1| Transcriptional regulator [Burkholderia gladioli BSR3]
gi|327370421|gb|AEA61777.1| Transcriptional regulator [Burkholderia gladioli BSR3]
Length = 313
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SL +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RRPPSLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLRSI HLFG+ ++RV +KQG YLR YVY+ ++LLSP LNRK I
Sbjct: 241 GILADIAFNPERDRNLRSIPVGHLFGSNVTRVALKQGAYLRGYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|161523997|ref|YP_001579009.1| transcriptional regulator CysB-like protein [Burkholderia
multivorans ATCC 17616]
gi|189351242|ref|YP_001946870.1| transcriptional regulator CysB-like protein [Burkholderia
multivorans ATCC 17616]
gi|221199298|ref|ZP_03572342.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD2M]
gi|221205800|ref|ZP_03578815.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD2]
gi|221211515|ref|ZP_03584494.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD1]
gi|421467942|ref|ZP_15916521.1| LysR substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|421480656|ref|ZP_15928268.1| LysR substrate binding domain protein [Burkholderia multivorans
CF2]
gi|160341426|gb|ABX14512.1| transcriptional regulator, LysR family [Burkholderia multivorans
ATCC 17616]
gi|189335264|dbj|BAG44334.1| LysR family transcriptional regulator [Burkholderia multivorans
ATCC 17616]
gi|221168876|gb|EEE01344.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD1]
gi|221174638|gb|EEE07070.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD2]
gi|221180583|gb|EEE12986.1| Cys regulon transcriptional activator CysB [Burkholderia
multivorans CGD2M]
gi|400220770|gb|EJO51281.1| LysR substrate binding domain protein [Burkholderia multivorans
CF2]
gi|400232947|gb|EJO62533.1| LysR substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
Length = 313
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+A+ TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAVATEAIADYKELVSLPCFQWHHAAVVPPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|238028379|ref|YP_002912610.1| transcriptional regulator CysB-like protein [Burkholderia glumae
BGR1]
gi|237877573|gb|ACR29906.1| transcriptional regulator CysB-like protein [Burkholderia glumae
BGR1]
Length = 313
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFRRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPGAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SL +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RRPPSLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR+IS HLFG+ ++RV +KQG YLR YVY+ ++LLSP LNRK I
Sbjct: 241 GILADIAFNPERDRNLRAISVGHLFGSNVTRVALKQGAYLRGYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALQG 306
>gi|339327052|ref|YP_004686745.1| LysR family transcriptional regulator [Cupriavidus necator N-1]
gi|338167209|gb|AEI78264.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation LysR family
[Cupriavidus necator N-1]
Length = 313
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 248/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++G +++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILSSVEKILQEVESLKRVGMDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +DQADI I TE +S L+S+P YQW +++I +HPLL
Sbjct: 121 KVRLSIQQGNPAQIADMLLHDQADIGIATEGISADKNLVSLPGYQWTHMVITTPEHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ YPLITYD +F+GR K+D+ F+L+ L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLALEDLMGYPLITYDANFAGRTKIDKAFALRHLEPDIVLEAIDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D+ RD+NLR I A HLFG+ ++ + +KQG YLRS+VY+FI+L SP LNRK +
Sbjct: 241 GIVAGVAYDAERDRNLRGIPAGHLFGSNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 EQAMSG 306
>gi|254251656|ref|ZP_04944974.1| Transcriptional regulatory protein LysR family [Burkholderia dolosa
AUO158]
gi|124894265|gb|EAY68145.1| Transcriptional regulatory protein LysR family [Burkholderia dolosa
AUO158]
Length = 313
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPPTLDDLAQYPLITYDDAFAGRRKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|167585739|ref|ZP_02378127.1| transcriptional regulator CysB-like protein [Burkholderia ubonensis
Bu]
Length = 314
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/307 (61%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + ++VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAVVVPADHPLLE 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G
Sbjct: 181 RKAPLTLDDLAQYPLITYDDAFAGRRKINHAFALRGLSPDIVLEAIDADVIKTYVELGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A IAF+ RD+NLR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK
Sbjct: 241 VGIMADIAFNPERDRNLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKL 300
Query: 300 INKILNN 306
I + L
Sbjct: 301 IEQALKG 307
>gi|78067276|ref|YP_370045.1| transcriptional regulator CysB-like protein [Burkholderia sp. 383]
gi|77968021|gb|ABB09401.1| transcriptional regulator, LysR family [Burkholderia sp. 383]
Length = 313
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW + +VP DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAISDYKELVSLPCFQWHHAAVVPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITY+ +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYEGAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD+ LR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRGLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|377820016|ref|YP_004976387.1| transcriptional regulator CysB-like protein [Burkholderia sp. YI23]
gi|357934851|gb|AET88410.1| transcriptional regulator CysB-like protein [Burkholderia sp. YI23]
Length = 313
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 250/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVEKILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQADIAI TE ++ +L+S+PC+QW+++ ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADIAIATEAIANYKELVSLPCFQWQHLAVMLPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L +++ YP+ITY+ SF+GR K+++ F L+ LTP IVLE I++D+IKTYVEL +GI
Sbjct: 181 RKTLTLDDLAQYPIITYEASFAGRTKINQAFQLRNLTPDIVLEAIDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RDK+LR++ HLFGT ++R+ +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDKHLRAMPVGHLFGTNVTRLALKQGAYLRSYVYTLVELLSPSLNRKLI 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 EQALSG 306
>gi|420249837|ref|ZP_14753072.1| transcriptional regulator [Burkholderia sp. BT03]
gi|398063304|gb|EJL55046.1| transcriptional regulator [Burkholderia sp. BT03]
Length = 313
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ E++ +DQAD+AI TE +S +L+S+PC+ W ++ ++P DHPLL
Sbjct: 121 KVHLSILQGSPTQVAELVLHDQADVAIATEAISTYKELVSLPCFTWHHLAVMPADHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKQLSLDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD+NLR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP +NRK I
Sbjct: 241 GIMADIAFNAERDRNLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPNMNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|295675776|ref|YP_003604300.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295435619|gb|ADG14789.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1002]
Length = 313
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+SIE I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSIEKILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLAIATEAISNYKDLVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNGERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPSLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|171316737|ref|ZP_02905949.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MEX-5]
gi|171098087|gb|EDT42902.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MEX-5]
Length = 313
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW + +V DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLAIATEAIADYKELVSLPCFQWHHAAVVLADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YPLITYD +F+GR K++ F+L+ L+P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKPVTLDDLAQYPLITYDDAFAGRKKINHAFALRGLSPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR I HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRSLRLIPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPTLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|413963408|ref|ZP_11402635.1| transcriptional regulator CysB-like protein [Burkholderia sp. SJ98]
gi|413929240|gb|EKS68528.1| transcriptional regulator CysB-like protein [Burkholderia sp. SJ98]
Length = 313
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 251/306 (82%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVEKILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPSAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQADIAI TE ++ +L+S+PC+QW+++ ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADIAIATEAIANYKELVSLPCFQWQHLAVMLPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L +++ +P+ITY+ SF+GR K+++ F+L+ LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKTLTLDDLAQFPIITYEASFAGRTKINQAFALRNLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR++ HLFGT ++R+ +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GILADIAFNPERDRHLRAMPVGHLFGTNVTRLALKQGAYLRSYVYTLVELLSPSLNRKLI 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 EQALSG 306
>gi|323525089|ref|YP_004227242.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1001]
gi|323382091|gb|ADX54182.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1001]
Length = 313
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADVAIATEAISNYKELVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRSKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNGERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPGLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|407712513|ref|YP_006833078.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Burkholderia phenoliruptrix BR3459a]
gi|407234697|gb|AFT84896.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Burkholderia phenoliruptrix BR3459a]
Length = 313
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLAIATEAISNYKELVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRSKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNGERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPGLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|390569820|ref|ZP_10250100.1| transcriptional regulator CysB-like protein [Burkholderia terrae
BS001]
gi|389938224|gb|EIN00073.1| transcriptional regulator CysB-like protein [Burkholderia terrae
BS001]
Length = 313
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 183/306 (59%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ E++ +DQAD+AI TE +S +L+S+PC+ W ++ ++P DHPLL
Sbjct: 121 KVHLSILQGSPTQVAELVLHDQADVAIATEAISTYKELVSLPCFTWHHLAVMPADHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKQLSLDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP +NRK I
Sbjct: 241 GIMADIAFNAERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPNMNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|186476987|ref|YP_001858457.1| transcriptional regulator CysB-like protein [Burkholderia phymatum
STM815]
gi|184193446|gb|ACC71411.1| transcriptional regulator, LysR family [Burkholderia phymatum
STM815]
Length = 313
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 183/306 (59%), Positives = 245/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILASVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ E++ +DQAD+AI TE +S +L+S+PC+ W ++ ++P DHPLL
Sbjct: 121 KVHLSILQGSPTQVAELVLHDQADVAIATEAISTYKELVSLPCFTWHHLAVMPADHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKQLSLDDLTQYPLITYDNAFAGRTKINDAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++RV +K G YLRSYVY+ ++LLSP LNR+ I
Sbjct: 241 GIMADIAFNAERDRHLRAMPVGHLFGSNVTRVALKHGAYLRSYVYTLVELLSPNLNRRLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|187922970|ref|YP_001894612.1| transcriptional regulator [Burkholderia phytofirmans PsJN]
gi|187714164|gb|ACD15388.1| transcriptional regulator, LysR family [Burkholderia phytofirmans
PsJN]
Length = 313
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVEKILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE ++ +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLAIATEAIANYKELVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP +NRK I
Sbjct: 241 GIMADIAFNAERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPSMNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|307728887|ref|YP_003906111.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1003]
gi|307583422|gb|ADN56820.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1003]
Length = 313
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/306 (60%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLAIATEAISNYKELVSLPCFQWHHVAVMQPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRSKINEAFRLRNLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++R+ +KQG YLR YVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNTERDRHLRAMPVGHLFGSNVTRIALKQGAYLRGYVYTLVELLSPGLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|209519249|ref|ZP_03268051.1| transcriptional regulator, LysR family [Burkholderia sp. H160]
gi|209500329|gb|EEA00383.1| transcriptional regulator, LysR family [Burkholderia sp. H160]
Length = 313
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAK+L+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKSLFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+SIE I+QE+E LK++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSIEKILQEVESLKRVGKDYAAQDQGNLTIAATHTQARYSLPGAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+AI TE +S L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLAIATEAISNYKDLVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+ +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSIDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD+ LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNAERDRQLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPSLNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|350544041|ref|ZP_08913704.1| Regulatory protein CysB [Candidatus Burkholderia kirkii UZHbot1]
gi|350528176|emb|CCD36306.1| Regulatory protein CysB [Candidatus Burkholderia kirkii UZHbot1]
Length = 313
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/306 (60%), Positives = 248/306 (81%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTE AKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTETAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ IL S+E I+QE+E L+++GK+++A D GNLTIA THTQARY+LP I EF +FP
Sbjct: 61 EPGQIILASVEKILQEVESLRRVGKDYAAQDQGNLTIAATHTQARYSLPSAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQADIAI TE ++ +L+S+ C+QW+++ ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADIAIATEAIANYKELVSLLCFQWQHLAVMQPDHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ YP+ITY+ SF+GR K+++ F L+ LTP IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKVLTLDDLAQYPIITYEASFAGRTKINQAFGLRNLTPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF+ RD++LR++ HLFGT I+R+ +KQG YLRSYVY+ ++LLSP LNRK I
Sbjct: 241 GIMADIAFNPERDRHLRAMPVGHLFGTNITRLALKQGAYLRSYVYTLVELLSPSLNRKLI 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 EQALSG 306
>gi|91782169|ref|YP_557375.1| transcriptional regulator CysB-like protein [Burkholderia
xenovorans LB400]
gi|385203573|ref|ZP_10030443.1| transcriptional regulator [Burkholderia sp. Ch1-1]
gi|91686123|gb|ABE29323.1| transcriptional regulator, LysR family [Burkholderia xenovorans
LB400]
gi|385183464|gb|EIF32738.1| transcriptional regulator [Burkholderia sp. Ch1-1]
Length = 313
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 183/306 (59%), Positives = 246/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVEKILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+ I TE ++ +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVIHDQADLCIATEAIANYKELVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRTKINEAFRLRGLHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++RV +KQG YLRSYVY+ ++LLSP +NRK I
Sbjct: 241 GIMADIAFNAERDRHLRAMPVGHLFGSNVTRVALKQGAYLRSYVYTLVELLSPSMNRKLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|312795328|ref|YP_004028250.1| cys regulon transcriptional activator [Burkholderia rhizoxinica HKI
454]
gi|312167103|emb|CBW74106.1| Cys regulon transcriptional activator [Burkholderia rhizoxinica HKI
454]
Length = 314
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/305 (60%), Positives = 246/305 (80%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP+ + EF +FP
Sbjct: 61 EPGRIILSSVEKILQEVENLKRVGKDYAAQDQGNLVIAATHTQARYSLPRAVAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV LS+LQGNP Q+ EM+ +DQAD+AI TE +S L+S+P +QW ++ + P +H LL
Sbjct: 121 KVHLSILQGNPTQVAEMVLHDQADLAIATEAISTYKDLVSLPAFQWHHLAVTPPEHALLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
I+L +++ +PLITYD +F+GR K+++ F+L+ LTP I+LE I++D+IKTYVEL +G
Sbjct: 181 KKEQITLDDLAQFPLITYDNAFAGRSKINQAFALRGLTPDIILEAIDADVIKTYVELGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +AF++ RD+ LR+I HLFGT +RV +KQGTYLR Y+Y+FI+LLSP LNRK
Sbjct: 241 VGIMADVAFNAQRDRPLRAIPVGHLFGTNTTRVALKQGTYLRGYIYTFIELLSPTLNRKL 300
Query: 300 INKIL 304
I + +
Sbjct: 301 IEQAM 305
>gi|170692031|ref|ZP_02883195.1| transcriptional regulator, LysR family [Burkholderia graminis
C4D1M]
gi|170143315|gb|EDT11479.1| transcriptional regulator, LysR family [Burkholderia graminis
C4D1M]
Length = 313
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 244/306 (79%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL ++IF RHGKR+R LT
Sbjct: 1 MNLQQFRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+S+E I+QE+E LK++GK+++A D GNL IA THTQARY+LP I EF +FP
Sbjct: 61 EPGRIILQSVERILQEVESLKRVGKDYAAQDQGNLVIAATHTQARYSLPAAIAEFKKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+LQG+P Q+ EM+ +DQAD+ I TE +S +L+S+PC+QW +V ++ DHPLL
Sbjct: 121 KVHLSILQGSPTQVAEMVLHDQADLCIATEAISNYKELVSLPCFQWHHVAVMQPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +++ YPLITYD +F+GR K++ F L+ L P IVLE I++D+IKTYVEL +G+
Sbjct: 181 RKLLSLDDLTQYPLITYDNAFAGRTKINEAFRLRALHPDIVLEAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF++ RD++LR++ HLFG+ ++RV +K G YLRSYVY+ ++LLSP LNR+ I
Sbjct: 241 GIMADIAFNAERDRHLRAMPVGHLFGSNVTRVALKHGAYLRSYVYTLVELLSPGLNRRLI 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQALKG 306
>gi|456062823|ref|YP_007501793.1| transcriptional regulator CysB-like protein [beta proteobacterium
CB]
gi|455440120|gb|AGG33058.1| transcriptional regulator CysB-like protein [beta proteobacterium
CB]
Length = 313
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 251/306 (82%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLT AAKAL+TSQPGVSKAIIELE+EL ++IF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTSAAKALFTSQPGVSKAIIELEDELGVEIFRRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL SIE I+ E+E L+++GK+F++ D GN IATTHTQARYALPK++ EFT +FP
Sbjct: 61 EPGKRILASIERILDEVETLRRVGKDFASQDQGNFVIATTHTQARYALPKVLTEFTKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV++S+ QG+P QI E++ +D+ADIAI TE ++ + ++++P YQW++VI+VPL HPLL
Sbjct: 121 KVRVSIQQGSPGQIAELLIHDRADIAIATEGIANTPGVLALPGYQWQHVIMVPLSHPLLN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++I+L+EI+ YPLITYD +F+GR K+D F+ + L+P I+LE I++D+IKTYVE MG+
Sbjct: 181 QSTITLEEIAKYPLITYDKAFAGRSKIDAAFAQRNLSPDIILEAIDADVIKTYVETGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D++RD+NLR I HLFG ++ + +KQG YLRS+VY+FI+L SP L +K +
Sbjct: 241 GIVAGLAYDADRDRNLRVIPVGHLFGNNVTHLGVKQGAYLRSFVYTFIELFSPTLTKKIV 300
Query: 301 NKILNN 306
+ +N+
Sbjct: 301 EQAMNS 306
>gi|145588805|ref|YP_001155402.1| transcriptional regulator CysB-like protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047211|gb|ABP33838.1| transcriptional regulator, LysR family [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 313
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 247/306 (80%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLT AAKAL+TSQPGVSKAIIELE+EL ++IF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTTAAKALFTSQPGVSKAIIELEDELGVEIFRRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL SIE I+ E+E LK++G++F++ D GN IATTHTQARYALPK++ EFT +FP
Sbjct: 61 EPGKRILISIERILDEVETLKRVGEDFASQDQGNFVIATTHTQARYALPKVLTEFTKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV++S+ QG+P QI E++ +D ADIAI TE ++ + ++++P YQW++V++VPL HPLL
Sbjct: 121 KVRVSIQQGSPGQIAELLSHDHADIAIATEGIANTPGVLALPGYQWQHVLMVPLSHPLLN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD +F+GR K+D F+ + +TP I+LE I++D+IKTYVE MGI
Sbjct: 181 QANVTLEEIAKYPIITYDKAFAGRSKIDAAFAQRNVTPDIILEAIDADVIKTYVEAGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A+D +RD+NL+ IS HLFG ++ + +KQG YLRS+VY+FI+L SP L +K +
Sbjct: 241 GIVAGQAYDPDRDRNLKVISVGHLFGNNVTHLGVKQGAYLRSFVYTFIELFSPTLTKKIV 300
Query: 301 NKILNN 306
+ + +
Sbjct: 301 EQAMTS 306
>gi|237747612|ref|ZP_04578092.1| cys regulon transcriptionnal regulator protein [Oxalobacter
formigenes OXCC13]
gi|229378974|gb|EEO29065.1| cys regulon transcriptionnal regulator protein [Oxalobacter
formigenes OXCC13]
Length = 313
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/304 (60%), Positives = 237/304 (77%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQNFNLT+AAKAL+TSQPGVSKAIIELE+EL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNFNLTDAAKALFTSQPGVSKAIIELEDELGVDIFRRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL SIE+IMQEI+ LK+IGKE++A D G+LTIA +HTQARY LPKII F ++P
Sbjct: 61 EPGRMILNSIELIMQEIDDLKRIGKEYAAQDAGSLTIAASHTQARYFLPKIIPAFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSLLQ + I EM+ DQA++A+VT + + L+++PC+QWEY ++V DHPL
Sbjct: 121 KVRLSLLQRKVEDIAEMVLLDQANLAVVTASVPEIEGLVTLPCHQWEYHLVVKPDHPLND 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L EI+ YPLITYD F GR +++ F + + I+LE I++D+IKTYVEL +G+
Sbjct: 181 SRMLTLDEIAKYPLITYDRVFHGRNRIESVFEQRNIKADILLEVIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GII AFD+ RDKNLRSI HLFGT S ++I++ YLRSY+Y+FI+++SP LNRK +
Sbjct: 241 GIIVGTAFDAERDKNLRSIPVGHLFGTGRSSILIRKNAYLRSYIYAFIEMISPNLNRKLV 300
Query: 301 NKIL 304
K L
Sbjct: 301 EKAL 304
>gi|237745418|ref|ZP_04575898.1| cys regulon transcriptionnal regulator protein [Oxalobacter
formigenes HOxBLS]
gi|229376769|gb|EEO26860.1| cys regulon transcriptionnal regulator protein [Oxalobacter
formigenes HOxBLS]
Length = 313
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 239/304 (78%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVRQNFNLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKRIRGLT
Sbjct: 1 MNLHQLRFVREAVRQNFNLTEAAKALFTSQPGVSKAIIELEDELGVDIFRRHGKRIRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL SIE+IMQE++ LK+IGKE++A D+G+LTIA THTQARY LP II F ++P
Sbjct: 61 EPGRMILNSIELIMQEVDDLKRIGKEYAAQDSGSLTIAATHTQARYFLPGIIPAFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+ SLLQ I EM+ DQA++A+VT+ ++ D LI++PC+QWE+ ++V DHPL
Sbjct: 121 KVRFSLLQRKIDDIAEMVLLDQANLAVVTDYVAEQDGLITLPCHQWEFHLVVKPDHPLND 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+E++ YP+ITYD F GR +++ F + + I+LE I++D+IKTYVEL +G+
Sbjct: 181 VKMLTLEEVAKYPIITYDKIFHGRNRIENVFQQRNVKADILLEVIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GII +AF+S +DKNLRSI HLFGT S +++++ YLR Y+Y+FI+++SP LNRK +
Sbjct: 241 GIIVGMAFNSEQDKNLRSIPVGHLFGTGRSSILVRKNAYLRGYIYAFIEMISPNLNRKLV 300
Query: 301 NKIL 304
K L
Sbjct: 301 EKAL 304
>gi|332284923|ref|YP_004416834.1| transcriptional regulator CysB-like protein [Pusillimonas sp. T7-7]
gi|330428876|gb|AEC20210.1| transcriptional regulator CysB-like protein [Pusillimonas sp. T7-7]
Length = 317
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 228/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R+NFNLTEAA+ LYTSQPGVSKAIIE E+EL + IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRNFNLTEAARTLYTSQPGVSKAIIEFEDELGVKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG + + I+ IM+E++ LKK+ EF+ D G LTIA TH QARY LPK+I F +FP
Sbjct: 61 KPGHVVAQVIDRIMREVDNLKKVSDEFARRDEGGLTIACTHAQARYILPKVIPAFRERFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSL +GNP + M+ ++QAD+AI TE L+ + L ++P Y WE+ I+V DHPL
Sbjct: 121 KVRLSLAEGNPPHLARMVLHEQADVAIATETLALTPGLAALPVYSWEHTIVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S I+L++++ YP++TYD +FSGR LD F+ +TP IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKAITLEQLAEYPIVTYDHAFSGRGTLDEVFAAAGITPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +AFD RDK L + A HLFGT ++RV +K G +LR YVY +++L+P+L
Sbjct: 241 VGLGIGIIAGMAFDPRRDKGLVGLPAGHLFGTHVTRVAVKSGVFLRDYVYVLLEMLAPEL 300
Query: 296 NRKFINKILNN 306
R+ + + ++
Sbjct: 301 TREVVQEAIDK 311
>gi|389871845|ref|YP_006379264.1| transcriptional regulator CysB-like protein [Advenella kashmirensis
WT001]
gi|388537094|gb|AFK62282.1| transcriptional regulator CysB-like protein [Advenella kashmirensis
WT001]
Length = 329
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 165/311 (53%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRF+RE +R+N+NLTEA++ L+TSQPGVSKAIIE E+EL + +F RHGKRI+GLT
Sbjct: 1 MNLQQFRFIRETIRRNYNLTEASRILFTSQPGVSKAIIEFEDELGVKVFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ IE IM E++ LKK+ EF+ D G+L IA THTQARY LP+ I EF +FP
Sbjct: 61 KPGAAVASIIERIMIEVDNLKKVSDEFARRDEGSLVIACTHTQARYFLPRFIPEFRRRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL +G+P Q+ +M+ +QADIA+ TE LS + L ++PCY WE+ ++V DHPL
Sbjct: 121 KVHVSLAEGSPMQLAQMVLQEQADIALATESLSEVNGLATLPCYSWEHTLVVKPDHPLTE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL++I +P+ITYD +FSGR +D+ F+ + L P IVLE I++D+IKTYV+
Sbjct: 181 LTSSQAKNLSLEQIVQFPIITYDRAFSGRTSIDQAFADKGLKPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ MGIGIIA +AFD RD I HLFGT I+R+ +K G +LR YVY F+ +L+P+L
Sbjct: 241 VEMGIGIIAGVAFDPRRDSGFVGIPVGHLFGTHITRIGLKSGVFLRDYVYDFLAMLTPEL 300
Query: 296 NRKFINKILNN 306
+R + +N+
Sbjct: 301 SRDAVEAAVNS 311
>gi|187477641|ref|YP_785665.1| transcriptional regulator CysB-like protein [Bordetella avium 197N]
gi|115422227|emb|CAJ48751.1| LysR-family transcriptional regulator [Bordetella avium 197N]
Length = 314
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 229/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L+++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLVTMPVYTWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LKSSEAKRLSLAQLAEYPIVTYDRAFTGRSTIDEVFANQSIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDGNLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R+ ++ + +
Sbjct: 301 TRQAVSDAVGH 311
>gi|421482837|ref|ZP_15930417.1| transcriptional regulator CysB-like protein [Achromobacter
piechaudii HLE]
gi|400199148|gb|EJO32104.1| transcriptional regulator CysB-like protein [Achromobacter
piechaudii HLE]
Length = 314
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKRLSLTQLAEYPIVTYDRAFTGRSTIDEVFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDSNLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R + + +
Sbjct: 301 TRAVVTEAVQG 311
>gi|398803461|ref|ZP_10562522.1| transcriptional regulator [Polaromonas sp. CF318]
gi|398096476|gb|EJL86799.1| transcriptional regulator [Polaromonas sp. CF318]
Length = 314
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/305 (53%), Positives = 233/305 (76%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTE AKAL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTETAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L+SIE+IM+E+ L++IG++FSA D+G L+IATTHTQARY LP+ + + FP
Sbjct: 61 EPGEHVLKSIELIMREVGNLRRIGEQFSAQDSGTLSIATTHTQARYVLPQPVAKLREAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L+ D L+++PCY+W++++++P+DHPL
Sbjct: 121 KVNVSLHQGSPDQVARMVLDEVAEIGIATESLTQYDDLVTLPCYEWQHMLVIPVDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ISL++++ PLITY SF+GR K+D F+ ++L P I LE I+SD+IKTYV L +G+
Sbjct: 181 KENISLEDLAEEPLITYHPSFTGRTKIDLAFAAKRLQPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAF-DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A +A + + +L +I A LFG ++RV K+ YLR++VY F +LLS KL+R
Sbjct: 241 GIVAEMAIKEDGTNSDLIAIPAGPLFGINVARVAFKRSAYLRNFVYKFAELLSDKLDRAL 300
Query: 300 INKIL 304
I K +
Sbjct: 301 ITKAM 305
>gi|163856086|ref|YP_001630384.1| transcriptional regulator CysB-like protein [Bordetella petrii DSM
12804]
gi|163259814|emb|CAP42115.1| transcriptional regulator, LysR-family [Bordetella petrii]
Length = 314
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 228/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPGFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPGQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S ++L +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAARNLTLAQLAEYPIVTYDRAFTGRTTIDEVFASQSIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++++P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDGNLVGLPVGHLFGTHTTRVGVKAGVFLRDYVYTFLEMMAPSL 300
Query: 296 NRKFINKILNN 306
R+ + + + +
Sbjct: 301 TRQVVAEAVQS 311
>gi|359797463|ref|ZP_09300047.1| transcriptional regulator CysB-like protein [Achromobacter
arsenitoxydans SY8]
gi|359364574|gb|EHK66287.1| transcriptional regulator CysB-like protein [Achromobacter
arsenitoxydans SY8]
Length = 314
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 225/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKRLSLAQLAEYPIVTYDRAFTGRSTIDEIFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDSNLVGLPVGHLFGTHTTRVGVKAGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R + +
Sbjct: 301 TRAVVTDAVQG 311
>gi|33597804|ref|NP_885447.1| transcriptional regulator CysB-like protein [Bordetella
parapertussis 12822]
gi|33602706|ref|NP_890266.1| transcriptional regulator CysB-like protein [Bordetella
bronchiseptica RB50]
gi|410421181|ref|YP_006901630.1| LysR family transcriptional regulator [Bordetella bronchiseptica
MO149]
gi|410473773|ref|YP_006897054.1| LysR-family transcriptional regulator [Bordetella parapertussis
Bpp5]
gi|412341959|ref|YP_006970714.1| LysR family transcriptional regulator [Bordetella bronchiseptica
253]
gi|427815722|ref|ZP_18982786.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica 1289]
gi|427818277|ref|ZP_18985340.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica D445]
gi|427825865|ref|ZP_18992927.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica Bbr77]
gi|33574233|emb|CAE38565.1| putative LysR-family transcriptional regulator [Bordetella
parapertussis]
gi|33577148|emb|CAE35705.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica RB50]
gi|408443883|emb|CCJ50577.1| putative LysR-family transcriptional regulator [Bordetella
parapertussis Bpp5]
gi|408448476|emb|CCJ60159.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica MO149]
gi|408771793|emb|CCJ56598.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica 253]
gi|410566722|emb|CCN24291.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica 1289]
gi|410569277|emb|CCN17370.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica D445]
gi|410591130|emb|CCN06227.1| putative LysR-family transcriptional regulator [Bordetella
bronchiseptica Bbr77]
Length = 314
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 228/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPSQLAEMVLHEQADLALATESLALTPGLATLPVYTWEHTVVVRPDHPLTE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S ++L +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSQARRLTLAQLAEYPIVTYDRAFTGRTTIDEIFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++++P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDANLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFMEMMAPGL 300
Query: 296 NRKFINKILNN 306
R+ +++ +
Sbjct: 301 TRQVVSEAVQG 311
>gi|384204696|ref|YP_005590435.1| transcriptional regulator CysB-like protein [Bordetella pertussis
CS]
gi|408416438|ref|YP_006627145.1| LysR family transcriptional regulator [Bordetella pertussis 18323]
gi|332382810|gb|AEE67657.1| transcriptional regulator CysB-like protein [Bordetella pertussis
CS]
gi|401778608|emb|CCJ64048.1| putative LysR-family transcriptional regulator [Bordetella
pertussis 18323]
Length = 317
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 228/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPSQLAEMVLHEQADLALATESLALTPGLATLPVYTWEHTVVVRPDHPLTE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S ++L +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSQARRLTLAQLAEYPIVTYDRAFTGRTTIDEIFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++++P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDANLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFMEMMAPGL 300
Query: 296 NRKFINKILNN 306
R+ +++ +
Sbjct: 301 TRQVVSEAVQG 311
>gi|293604033|ref|ZP_06686445.1| Cys regulon transcriptional regulator Cbl [Achromobacter piechaudii
ATCC 43553]
gi|292817568|gb|EFF76637.1| Cys regulon transcriptional regulator Cbl [Achromobacter piechaudii
ATCC 43553]
Length = 314
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ +P++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKRLSLAQLAEHPIVTYDRAFTGRSTIDEVFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDSNLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R + + +
Sbjct: 301 TRAVVTEAVQG 311
>gi|422323137|ref|ZP_16404177.1| transcriptional regulator [Achromobacter xylosoxidans C54]
gi|423016263|ref|ZP_17006984.1| transcriptional regulator CysB-like protein [Achromobacter
xylosoxidans AXX-A]
gi|317401903|gb|EFV82510.1| transcriptional regulator [Achromobacter xylosoxidans C54]
gi|338780789|gb|EGP45190.1| transcriptional regulator CysB-like protein [Achromobacter
xylosoxidans AXX-A]
Length = 314
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKRLSLAQLAEYPIVTYDRAFTGRSTIDEVFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD +L + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDSSLVGLPVGHLFGTHTTRVGVKAGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R + + +
Sbjct: 301 TRAVVTEAVQG 311
>gi|33593401|ref|NP_881045.1| transcriptional regulator CysB-like protein [Bordetella pertussis
Tohama I]
gi|33572757|emb|CAE42687.1| putative LysR-family transcriptional regulator [Bordetella
pertussis Tohama I]
Length = 317
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 161/311 (51%), Positives = 228/311 (73%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LS+ +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSVAEGSPSQLAEMVLHEQADLALATESLALTPGLATLPVYTWEHTVVVRPDHPLTE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S ++L +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSQARRLTLAQLAEYPIVTYDRAFTGRTTIDEIFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++++P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDANLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFMEMMAPGL 300
Query: 296 NRKFINKILNN 306
R+ +++ +
Sbjct: 301 TRQVVSEAVQG 311
>gi|311104774|ref|YP_003977627.1| transcriptional regulator [Achromobacter xylosoxidans A8]
gi|310759463|gb|ADP14912.1| HTH-type transcriptional regulator CysB [Achromobacter xylosoxidans
A8]
Length = 314
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ +P++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LTSSAAKRLSLAQLAEFPIVTYDRAFTGRSTIDEIFANQGIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDGNLVGLPVGHLFGTHTTRVGVKAGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R + + +
Sbjct: 301 TRAVVTEAVQG 311
>gi|91788269|ref|YP_549221.1| transcriptional regulator CysB-like protein [Polaromonas sp. JS666]
gi|91697494|gb|ABE44323.1| transcriptional regulator, LysR family [Polaromonas sp. JS666]
Length = 314
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 158/305 (51%), Positives = 233/305 (76%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA+R+N NLTE A+AL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAIRRNLNLTETARALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L+SIE+IM+E+ L++IG++FSA D+G L+IATTHTQARY LP+ + + FP
Sbjct: 61 EPGEHVLKSIELIMREVGNLRRIGEQFSAQDSGTLSIATTHTQARYVLPQPVAKLREAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L+ ++L+++PCY+W++++++P+DHPL
Sbjct: 121 KVNVSLHQGSPDQVARMVIDEVAEIGIATESLTQYEELVTLPCYEWQHMLVMPVDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L++++ PLITY SF+GR K+D F+ ++L P I LE I+SD+IKTYV L +G+
Sbjct: 181 KDDITLEDLAQEPLITYHPSFTGRTKVDHAFAAKRLQPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAF-DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A +A D + +L + A LFG ++RV K+ YLR++VY F +LLS KL+R
Sbjct: 241 GIVAEMALMDDGTNSDLVAKPAGMLFGMNVARVAFKRSAYLRNFVYKFAELLSDKLDRAL 300
Query: 300 INKIL 304
I K +
Sbjct: 301 ITKAM 305
>gi|452124173|ref|ZP_21936757.1| transcriptional regulator CysB-like protein [Bordetella holmesii
F627]
gi|452127562|ref|ZP_21940143.1| transcriptional regulator CysB-like protein [Bordetella holmesii
H558]
gi|451923403|gb|EMD73544.1| transcriptional regulator CysB-like protein [Bordetella holmesii
F627]
gi|451926842|gb|EMD76972.1| transcriptional regulator CysB-like protein [Bordetella holmesii
H558]
Length = 314
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 226/311 (72%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL QFRFVRE +R++FNLTEAA+ LYTSQPGVSKAIIE E+EL I IF RHGKRI+ LT
Sbjct: 1 MNLQQFRFVRETIRRDFNLTEAARMLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKCLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG A+ + I+ IM+E++ LKK+ EF+ D G L IA THTQARY LP++I F QFP
Sbjct: 61 KPGLAVSQVIDRIMREVDNLKKVSDEFARRDEGGLVIACTHTQARYLLPRVIPAFRKQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL +G+P Q+ EM+ ++QAD+A+ TE L+ + L ++P Y WE+ ++V DHPL
Sbjct: 121 KVHLSLAEGSPAQLAEMVLHEQADLALATESLALTPGLATLPVYAWEHTVVVRPDHPLAD 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL +++ YP++TYD +F+GR +D F+ Q + P IVLE I++D+IKTYV+
Sbjct: 181 LKSSEAKRLSLAQLAEYPIVTYDRAFTGRSTIDEVFANQAIHPDIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +GIGIIA +A+D RD NL + HLFGT +RV +K G +LR YVY+F+++L+P L
Sbjct: 241 VGLGIGIIAGVAYDPRRDSNLVGLPVGHLFGTHTTRVGVKSGVFLRDYVYTFLEMLAPSL 300
Query: 296 NRKFINKILNN 306
R+ + + +
Sbjct: 301 TRQVVTEAVQG 311
>gi|407939245|ref|YP_006854886.1| transcriptional regulator CysB-like protein [Acidovorax sp. KKS102]
gi|407897039|gb|AFU46248.1| transcriptional regulator CysB-like protein [Acidovorax sp. KKS102]
Length = 313
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 227/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ MI ++ A+I + TE L+ +L+++PCY+W++V++VP DHPL
Sbjct: 121 KVNVSLHQATPHEVARMIIDEVAEIGMATESLADYPELVTLPCYEWQHVLVVPNDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L ++++ LITY SF+GR K+D F+ +KLTP IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDLAHEALITYHPSFTGRGKIDHAFAARKLTPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R+ I
Sbjct: 241 GIVAEMAMRDDPVGDLAVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRELI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|418530093|ref|ZP_13096019.1| transcriptional regulator CysB-like protein [Comamonas testosteroni
ATCC 11996]
gi|371452646|gb|EHN65672.1| transcriptional regulator CysB-like protein [Comamonas testosteroni
ATCC 11996]
Length = 313
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 228/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQEVLKSIELIMREVGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPAVARLRELYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVTISLHQATPAEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVIPTGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L++I+ LITY SF+GR K+D F +++L P+IVLE I++D+IKTYV L +GI
Sbjct: 181 KERITLEDIAQEALITYHPSFTGRGKIDHAFEMRRLHPHIVLEAIDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFGT+++RV IK+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDTVNDLVVRPVGHLFGTSVARVAIKRGAYLRNFVYRFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +N
Sbjct: 301 MRAMNG 306
>gi|264678999|ref|YP_003278906.1| LysR family transcriptional regulator [Comamonas testosteroni
CNB-2]
gi|299530035|ref|ZP_07043462.1| transcriptional regulator CysB-like protein [Comamonas testosteroni
S44]
gi|262209512|gb|ACY33610.1| transcriptional regulator, LysR family [Comamonas testosteroni
CNB-2]
gi|298722015|gb|EFI62945.1| transcriptional regulator CysB-like protein [Comamonas testosteroni
S44]
Length = 313
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 229/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQEVLKSIELIMREVGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPAVARLRELYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVTISLHQATPAEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVIPTGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L++I+ LITY SF+GR K+D+ F +++L P+IVLE I++D+IKTYV L +GI
Sbjct: 181 KERITLEDIAQEALITYHPSFTGRGKIDQAFEMRRLHPHIVLEAIDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFGT+++RV IK+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPVNDLVVRPVGHLFGTSVARVAIKRGAYLRNFVYRFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +N
Sbjct: 301 MRAMNG 306
>gi|239815704|ref|YP_002944614.1| transcriptional regulator CysB-like protein [Variovorax paradoxus
S110]
gi|239802281|gb|ACS19348.1| transcriptional regulator, LysR family [Variovorax paradoxus S110]
Length = 313
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 230/306 (75%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQF+FV+EAVR+N NLTEAAKAL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFKFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ ++ SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVAKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A++ I TE LS +L+++PCY+W++V+++P DHPL
Sbjct: 121 KVNVSLHQGSPDQVARMVIDEIAEVGIATESLSDYTELVTLPCYEWQHVLVLPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL+++++ P+ITY SF+GR ++D F+ +KLTP I LE I+SD+IKTYV L +G+
Sbjct: 181 KERISLEDLAHEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L H+FG I+RV K+ YLR++V+ F +LLS +L+R I
Sbjct: 241 GIVAEMAVRDESNADLVVRPMGHVFGQNIARVAFKRSAYLRNFVFKFAELLSDRLDRNLI 300
Query: 301 NKILNN 306
K L+
Sbjct: 301 AKALSG 306
>gi|113868956|ref|YP_727445.1| transcriptional regulator CysB-like protein [Ralstonia eutropha
H16]
gi|113527732|emb|CAJ94077.1| transcriptional regulator, LysR-family [Ralstonia eutropha H16]
Length = 270
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 157/250 (62%), Positives = 206/250 (82%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQN+NLTEAAKALYTSQPGVSKAIIELEEEL +DIF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNYNLTEAAKALYTSQPGVSKAIIELEEELGVDIFTRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL S+E I+QE+E LK++G +++A D GN TIATTHTQARYALP++I EFT ++P
Sbjct: 61 EPGRRILSSVEKILQEVESLKRVGMDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QGNP QI +M+ +DQADI I TE +S L+S+P YQW +++I P +HPLL
Sbjct: 121 KVRLSIQQGNPAQIADMLLHDQADIGIATEGISADKNLVSLPGYQWTHMVITPPEHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ YPLITYD +F+GR K+D+ F+L+ L P IVLE I++D+IKTYVE+ +G+
Sbjct: 181 KKHLALEDLMGYPLITYDANFAGRTKIDKAFALRHLEPDIVLEAIDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDS 250
G +A +A+D+
Sbjct: 241 GFVAGVAYDA 250
>gi|296137011|ref|YP_003644253.1| LysR family transcriptional regulator [Thiomonas intermedia K12]
gi|410694763|ref|YP_003625385.1| HTH-type transcriptional regulator cbl [Thiomonas sp. 3As]
gi|294341188|emb|CAZ89589.1| HTH-type transcriptional regulator cbl [Thiomonas sp. 3As]
gi|295797133|gb|ADG31923.1| transcriptional regulator, LysR family [Thiomonas intermedia K12]
Length = 316
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 154/306 (50%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRF++EAVR+ NLTEAA+AL+TSQPGVSKAIIELE EL ++IF RHGKRIR LT
Sbjct: 1 MNLHQFRFLQEAVRRKLNLTEAARALHTSQPGVSKAIIELESELGVEIFSRHGKRIRKLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +LRS++II++E+ LK+IG++++A D G LT+A THTQARY LP +I EF + P
Sbjct: 61 EPGVEVLRSVDIILREVANLKRIGQDYAARDAGQLTVAATHTQARYKLPWVIAEFRRRMP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ LLQG P Q+ + +R ++AD+ + +E L S L+++PCY W+++ +VP H L
Sbjct: 121 AVQVQLLQGTPDQVAQAVREERADLGLASESLQDSPDLLTLPCYSWQHLAVVPHGHALCD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L E++ +PL+TY+ +F+GR ++D F+ L P IVLE ++SD++KTYVEL +G+
Sbjct: 181 RTELTLAELATFPLVTYEPTFAGRRQIDAAFAHANLQPQIVLEALDSDVLKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A + RD LR++ A HLFG ++RV K+G RS+V F +L+SP+L RK +
Sbjct: 241 GLIAEMAISAERDTALRALPAGHLFGQQLTRVAFKRGVLQRSFVPLFTELISPRLPRKLV 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 EQTLRG 306
>gi|221066426|ref|ZP_03542531.1| transcriptional regulator, LysR family [Comamonas testosteroni
KF-1]
gi|220711449|gb|EED66817.1| transcriptional regulator, LysR family [Comamonas testosteroni
KF-1]
Length = 313
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 228/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQEVLKSIELIMREVGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPAVARLRELYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVTISLHQATPAEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVIPTGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L++I+ LITY SF+GR K+D+ F +++L P+IVLE I++D+IKTYV L +GI
Sbjct: 181 KERITLEDIAQEALITYHPSFTGRGKIDQAFEMRRLHPHIVLEAIDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV IK+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPVNDLVVRPVGHLFGASVARVAIKRGAYLRNFVYRFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +N
Sbjct: 301 MRAMNG 306
>gi|398809478|ref|ZP_10568328.1| transcriptional regulator [Variovorax sp. CF313]
gi|398085953|gb|EJL76595.1| transcriptional regulator [Variovorax sp. CF313]
Length = 313
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 228/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQF+FV+EAVR+N NLTEAAKAL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFKFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ ++ SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVANLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L +L+++PCY+W++V+++P DHPL
Sbjct: 121 KVNVSLHQGSPDQVARMVIDEIAEIGIATESLDGYAELVTLPCYEWQHVLVLPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL+++++ P+ITY SF+GR ++D F+ +KLTP I LE I+SD+IKTYV L +G+
Sbjct: 181 KERISLEDLASEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L H+FG I+RV K+ YLR++V+ F +LLS +L+R I
Sbjct: 241 GIVAEMAVRDESNADLVVRPMGHVFGQNIARVAFKRSAYLRNFVFKFAELLSDRLDRNLI 300
Query: 301 NKILNN 306
K L+
Sbjct: 301 AKALSG 306
>gi|260221414|emb|CBA29953.1| HTH-type transcriptional regulator cysB [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 321
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 230/314 (73%), Gaps = 8/314 (2%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+I++E+ LK+IG+++S+ D+G L+IATTHTQARY LP+ + + FP
Sbjct: 61 EPGQHVLKSIELILREVNNLKRIGEQYSSQDSGTLSIATTHTQARYVLPEKVAQLRTAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG P Q+ M+ +D A+I I TE LS +L+++PCY+W++V+++P DHPL
Sbjct: 121 KVNVSLHQGAPDQVARMLIDDVAEIGIATESLSNYTELVTLPCYEWQHVLVLPTDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ PLITY SF+GR K+D+ F +KL P I LE I+SD+IKTYV L +GI
Sbjct: 181 KERVTLEDVAAEPLITYHPSFTGRTKIDQAFEARKLEPRISLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDS---NRDKN-----LRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLS 292
GI A +A + +KN L A +LFG ++RV K+ YLR++V++F +LLS
Sbjct: 241 GIAAEMAVTDVVEDMEKNGARGGLVVRPAGYLFGQNVTRVAFKRSAYLRNFVFTFAELLS 300
Query: 293 PKLNRKFINKILNN 306
+LNR I K +
Sbjct: 301 SRLNRALIAKAMEG 314
>gi|365091980|ref|ZP_09329231.1| transcriptional regulator CysB-like protein [Acidovorax sp. NO-1]
gi|363415717|gb|EHL22843.1| transcriptional regulator CysB-like protein [Acidovorax sp. NO-1]
Length = 313
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 224/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V++VP DHPL
Sbjct: 121 KVNISLHQATPHEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVVPNDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L ++++ LITY SF+GR K+D F+ +KLTP IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDLAHESLITYHPSFTGRGKIDHAFAARKLTPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+ YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPVGDLAVRPVGHLFGQSVARVAFKRSAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|332528354|ref|ZP_08404354.1| transcriptional regulator CysB-like protein [Hylemonella gracilis
ATCC 19624]
gi|332042225|gb|EGI78551.1| transcriptional regulator CysB-like protein [Hylemonella gracilis
ATCC 19624]
Length = 327
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/320 (50%), Positives = 231/320 (72%), Gaps = 14/320 (4%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+ NLTEAAKAL+TSQPGVSKAI+ELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAVRRQLNLTEAAKALHTSQPGVSKAILELEEELGIDIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +LRSIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP + + +P
Sbjct: 61 EPGEQVLRSIEVIMREVGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPAPVAKLRSAWP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKLSL QGNP Q+ M+ ++ A+I I TE L+ D+L+++PCY+WE+V+++P HPL
Sbjct: 121 QVKLSLHQGNPDQVARMLIDEVAEIGIATESLADYDELVTLPCYEWEHVLVLPAQHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L++++ PLITY +F+GR ++D F+ +KL P IVLE I+SD+I TYV+L MG+
Sbjct: 181 KERLHLEDLAAVPLITYHPTFTGRTRIDTAFAQRKLNPQIVLEAIDSDVITTYVKLGMGL 240
Query: 241 GIIASIAF-------------DSNRDKNLRSISA-SHLFGTTISRVIIKQGTYLRSYVYS 286
G++A +A D++ D + HLFG ++RV K+G YLR++VY
Sbjct: 241 GLVAEMAVRDRPSLTHREAPTDAHGDTGELVVRPLGHLFGHNVTRVAFKRGAYLRNFVYE 300
Query: 287 FIKLLSPKLNRKFINKILNN 306
F +LLS +L R + +++
Sbjct: 301 FAELLSARLPRDLVQRVMRG 320
>gi|406974492|gb|EKD97571.1| hypothetical protein ACD_23C00858G0003 [uncultured bacterium]
Length = 313
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/306 (52%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P Q+ M+ ++ A+I + TE L+ +L+++PCY+WE+V+++P HPL
Sbjct: 121 KVNISLHQTTPDQVARMVIDEVAEIGMATESLADYPELVTLPCYEWEHVLVLPPGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L +I++ PLITY +F+GR K+D FS ++L P I LE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDIAHEPLITYHPTFTGRGKIDLAFSTRRLQPRIALEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R+ I
Sbjct: 241 GIVAEMAMRDDPVGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRELI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|406975223|gb|EKD98051.1| hypothetical protein ACD_23C00607G0002 [uncultured bacterium]
Length = 313
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/304 (52%), Positives = 226/304 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P Q+ M+ ++ A+I + TE L+ +L+++PCY+WE+V+++P HPL
Sbjct: 121 KVNISLHQTTPDQVARMVIDEVAEIGMATESLADYPELVTLPCYEWEHVLVLPPGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L +I++ PLITY +F+GR K+D+ F+ ++L P I LE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDIAHEPLITYHPTFTGRGKIDQAFATRRLQPRIALEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R+ I
Sbjct: 241 GIVAEMAMRDDPLGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRELI 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ARAM 304
>gi|121605073|ref|YP_982402.1| transcriptional regulator CysB-like protein [Polaromonas
naphthalenivorans CJ2]
gi|120594042|gb|ABM37481.1| transcriptional regulator, LysR family [Polaromonas
naphthalenivorans CJ2]
Length = 314
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 230/307 (74%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTE A+AL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTETARALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L+SIE+IM+E+ L++IG+++SA D+G L+IATTH+QARY LP+ + FP
Sbjct: 61 EPGEHVLKSIELIMREVGNLRRIGEQYSAQDSGTLSIATTHSQARYVLPQPVARLREAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L+ D L+++PCY+W++++++PL HPL
Sbjct: 121 KVNVSLHQGSPDQVARMVLDEVAEIGIATESLNQYDDLVTLPCYEWQHMLVMPLSHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L++++ PLITY SFSGR K+D+ F+ + L P I LE I++D+IKTYV L +G+
Sbjct: 181 KEHITLEDLALEPLITYHPSFSGRTKVDQAFAAKHLHPRIALEAIDADVIKTYVRLGLGV 240
Query: 241 GIIASIAF-DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A +A D + +L +I A LFG ++RV K+ YLR++VY F +LLS KL+R
Sbjct: 241 GIVAEMAVKDDGSNSDLLTIPAGPLFGVNVARVAFKRSAYLRNFVYKFAELLSDKLSRDL 300
Query: 300 INKILNN 306
I K +
Sbjct: 301 IVKAMTG 307
>gi|124265320|ref|YP_001019324.1| LysR family transcriptional regulator [Methylibium petroleiphilum
PM1]
gi|124258095|gb|ABM93089.1| transcriptional regulator, LysR family [Methylibium petroleiphilum
PM1]
Length = 311
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 222/306 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLT+ A+AL+TSQPGVS+ I ELE+EL +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRLGFNLTDVAEALHTSQPGVSRQIRELEDELGVDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L +E ++ + + LK+ G +++ D G L+IA TH+QARYALP +++F P
Sbjct: 61 APGEAVLPIVERLLHDADNLKRAGADYAQQDHGPLSIAATHSQARYALPPAVRDFRGSHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+PKQ+ +M+ + +ADI I TE L+ L+++PCY+W + ++VP DHPLL
Sbjct: 121 GVQLQLHQGSPKQVAQMLLDGEADIGIATEALAQYPDLVALPCYRWTHAVLVPPDHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++LK ++ YPLITYD ++GR +D F + LTP + L +++D+IKTYVEL +G+
Sbjct: 181 GGALTLKRLAEYPLITYDAGYTGRSHIDEAFEREGLTPTLALTAMDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ASIA+D RD++LR++ A HLF ++R+ +K+G+YLR+YVY FI+ +P L RK +
Sbjct: 241 GIVASIAYDDERDRHLRALDARHLFAVNMTRLALKRGSYLRAYVYDFIESFAPSLTRKVV 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 QRALDG 306
>gi|241765200|ref|ZP_04763184.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN]
gi|241365129|gb|EER60001.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN]
Length = 313
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/306 (52%), Positives = 226/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +LRSIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLRSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P Q+ M+ ++ A+I + TE L+ +L+++PCY+WE+V+++P +HPL
Sbjct: 121 KVNISLHQTTPDQVARMVIDEVAEIGMATESLADYPELVTLPCYEWEHVLVLPPNHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L++I+ PLITY +F+GR K+D F ++L P I LE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLEDIAQEPLITYHPTFTGRGKIDHAFLNRRLQPRIALEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R+ I
Sbjct: 241 GIVAEMAMRDDPVGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRELI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 ARAMSG 306
>gi|351728687|ref|ZP_08946378.1| transcriptional regulator CysB-like protein [Acidovorax radicis
N35]
Length = 313
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ +L+++PCY+W++V++VP DHPL
Sbjct: 121 KVNISLHQATPHEVARMVIDEVAEIGMATESLADYPELVTLPCYEWQHVLVVPNDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L ++++ LITY SF+GR K+D+ F+ +KL P IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDLAHEALITYHPSFTGRGKIDQAFAARKLQPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+ YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPVGDLAVRPVGHLFGQSVARVAFKRSAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|319793488|ref|YP_004155128.1| LysR family transcriptional regulator [Variovorax paradoxus EPS]
gi|315595951|gb|ADU37017.1| transcriptional regulator, LysR family [Variovorax paradoxus EPS]
Length = 313
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 227/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQF+FV+EAVR+N NLTEAAKAL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFKFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ ++ SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVANLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L +L+++PCY+W++V+++P DHPL
Sbjct: 121 KVNVSLHQGSPDQVARMVIDEIAEIGIATESLDGYAELVTLPCYEWQHVLVLPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL++++ P+ITY SF+GR ++D F+ +KLTP I LE I+SD+IKTYV L +G+
Sbjct: 181 KERISLEDLALEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L H+FG I+RV K+ YLR++V+ F +LLS +L+R I
Sbjct: 241 GIVAEMAVRDESNADLVVRPMGHVFGQNIARVAFKRSAYLRNFVFKFAELLSDRLDRNLI 300
Query: 301 NKILNN 306
K L+
Sbjct: 301 AKALSG 306
>gi|337279577|ref|YP_004619049.1| transcriptional regulator CysB [Ramlibacter tataouinensis TTB310]
gi|334730654|gb|AEG93030.1| Candidate transcriptional regulator CysB (Cys regulon
transcriptional activator), LysR family [Ramlibacter
tataouinensis TTB310]
Length = 314
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/309 (52%), Positives = 227/309 (73%), Gaps = 5/309 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL ++IF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +LRSIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVLRSIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVSVAKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L+ L+++PCY+W++V+++P H L
Sbjct: 121 KVNVSLHQGSPDQVARMVMDEVAEIGIATESLADYQDLVTLPCYEWQHVLVMPSAHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL++++ P+ITY SF+GR ++D F+ +KL P I LE I+SD+IKTYV L +G+
Sbjct: 181 KERISLEDLAAEPIITYHPSFTGRTRIDTAFANRKLQPRIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAF---DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GI+A +A SN D +R + LFG I+RV K+ YLR++VY F +LLSP+L+R
Sbjct: 241 GIVAEMAVRDDGSNGDLAVRPL--GQLFGQNIARVAFKRSAYLRNFVYQFAELLSPRLDR 298
Query: 298 KFINKILNN 306
I K +
Sbjct: 299 HLIAKAMTG 307
>gi|120611825|ref|YP_971503.1| transcriptional regulator CysB-like protein [Acidovorax citrulli
AAC00-1]
gi|326316896|ref|YP_004234568.1| LysR family transcriptional regulator [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|120590289|gb|ABM33729.1| transcriptional regulator, LysR family [Acidovorax citrulli
AAC00-1]
gi|323373732|gb|ADX46001.1| transcriptional regulator, LysR family [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 313
Score = 346 bits (887), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 227/306 (74%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVLKSIELIMREVGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPVPVAKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVNVSLHQATPHEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVMPSGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+ +I++ LITY SF+GR K+D+ F+ +KL P IVLE I+SD+IKTYV L +G+
Sbjct: 181 QERISVDDIAHEALITYHPSFTGRGKIDQAFAARKLQPRIVLEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +LNR+ +
Sbjct: 241 GIVAEMAMRDDPLGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLNRELV 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|121611825|ref|YP_999632.1| transcriptional regulator CysB-like protein [Verminephrobacter
eiseniae EF01-2]
gi|121556465|gb|ABM60614.1| transcriptional regulator, LysR family [Verminephrobacter eiseniae
EF01-2]
Length = 313
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 226/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAI++LEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAILDLEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMRELGNLKRIGEQFSAQDSGTLSIATTHTQARYVLPIPVARLRDAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P+++ M+ ++ ADI + TE L+ +L+++PCY+W++V+++P DHPL
Sbjct: 121 KVNISLHQATPQEVARMVIDEVADIGMATESLADYPELVTLPCYEWQHVLVLPGDHPLAH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L ++++ LITY SF+GR K+D F +KL P IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDLAHEALITYHPSFTGRGKIDHSFGARKLQPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG ++RV K+G YLR++VY F +L+S +L+R+ I
Sbjct: 241 GIVAEMAMREDPVGDLAVRPVGHLFGQNVTRVAFKRGAYLRNFVYKFAELISERLSRELI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 AQAMSG 306
>gi|388568803|ref|ZP_10155214.1| transcriptional regulator CysB-like protein [Hydrogenophaga sp.
PBC]
gi|388264057|gb|EIK89636.1| transcriptional regulator CysB-like protein [Hydrogenophaga sp.
PBC]
Length = 314
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/305 (52%), Positives = 229/305 (75%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQF+FV+EAVR+N NLTEAAKAL+TSQPGVSKAIIELE+EL I+IF RHGKRI+ +T
Sbjct: 1 MNLHQFKFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEDELGIEIFARHGKRIKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SI+II++E+ LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQQVLKSIDIILREVNNLKRIGEQYSAQDSGTLSIATTHTQARYVLPGPVAALRQAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ + A+I + TE L +L+++P Y+W++V++ P DHPLL
Sbjct: 121 KVGISLHQGSPDQVARMLIEEVAEIGMATESLVNYPELVTLPAYEWQHVLVFPFDHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L++++ PLITY SF+GR ++D+ F+L+ L P +VLE I+SD+IKTYV+L MG+
Sbjct: 181 RERIGLEDLAQVPLITYHPSFTGRTRIDQAFALRHLQPNVVLEAIDSDVIKTYVKLGMGV 240
Query: 241 GIIASIAFDS-NRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A +A N+ +L S A LFG ++RV K+GTYLR +V F +LLS +L+R+
Sbjct: 241 GIVAEMAVKGENQTPDLVSRPAGALFGHNLARVAFKRGTYLRQFVLRFAELLSERLSREL 300
Query: 300 INKIL 304
I + +
Sbjct: 301 IQRAM 305
>gi|171059280|ref|YP_001791629.1| transcriptional regulator CysB-like protein [Leptothrix cholodnii
SP-6]
gi|170776725|gb|ACB34864.1| transcriptional regulator, LysR family [Leptothrix cholodnii SP-6]
Length = 321
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 222/310 (71%), Gaps = 4/310 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTE AKAL+TSQPG+SKAI+ELEEEL +DIF+RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTETAKALHTSQPGISKAILELEEELGVDIFVRHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG +FS D G L+IA THTQARY LP + +P
Sbjct: 61 EPGQQVLKSIEVIMREVVNLKRIGDDFSLQDVGTLSIAATHTQARYVLPAPVAALRSSYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG P Q+ +M+ +D A++ + TE L + L+++PCY+W +V ++P DHPL L
Sbjct: 121 KVSVSLHQGTPDQVAQMVLDDAAEVGMATERLMQYEDLVTLPCYEWRHVAVMPADHPLAL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ISL+++++ PLI+Y SF+GR K+D F + L P I LE I+SD+IKTYV L +G+
Sbjct: 181 VERISLEQLAHEPLISYHPSFTGRSKIDAAFEARNLKPQIALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSN----RDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +A + L + HLFG +++R+ K+ YLR +VY+F +LLS +L+
Sbjct: 241 GIVAEMAVRDDPICGPGGELVARPVGHLFGPSVARIAFKRSAYLRHFVYAFAELLSERLS 300
Query: 297 RKFINKILNN 306
R I +++
Sbjct: 301 RALIMRVMQG 310
>gi|160898974|ref|YP_001564556.1| transcriptional regulator CysB-like protein [Delftia acidovorans
SPH-1]
gi|333914899|ref|YP_004488631.1| LysR family transcriptional regulator [Delftia sp. Cs1-4]
gi|160364558|gb|ABX36171.1| transcriptional regulator, LysR family [Delftia acidovorans SPH-1]
gi|333745099|gb|AEF90276.1| transcriptional regulator, LysR family [Delftia sp. Cs1-4]
Length = 326
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL IDIF RHGKR++ +T
Sbjct: 14 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRIT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L+SIE+IM+EI LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 74 EPGLEVLKSIELIMREIGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPAVARLRDLYP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ ADI + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 134 KVTISLHQATPAEVARMVIDEIADIGMATESLADYPDLVTLPCYEWQHVLVMPTGHPLAQ 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L +I++ LITY SF+GR K+D+ F+ ++L P IVLE I+SD+IKTYV L +GI
Sbjct: 194 KERITLDDIAHESLITYHPSFTGRGKIDQAFATRRLRPRIVLEAIDSDVIKTYVRLGLGI 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV IK+G YLR++VY F +LLS +L R I
Sbjct: 254 GIVAEMAMRDDPVNDLVVRPMGHLFGQSVARVAIKRGAYLRNFVYRFAELLSDRLTRDLI 313
Query: 301 NKILNN 306
+ ++
Sbjct: 314 MRAMSG 319
>gi|395009129|ref|ZP_10392696.1| transcriptional regulator [Acidovorax sp. CF316]
gi|394312814|gb|EJE49924.1| transcriptional regulator [Acidovorax sp. CF316]
Length = 313
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/306 (51%), Positives = 223/306 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+ NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRGLNLTEAAKALHTSQPGVSKAIIELEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG++FSA D G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIEVIMREVGNLKRIGEQFSAQDNGTLSIATTHTQARYVLPVPVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P Q+ M+ ++ A+I + TE L+ +L+++PCY+WE+V+++P HPL
Sbjct: 121 KVNISLHQATPDQVARMVIDEVAEIGMATESLADYPELVTLPCYEWEHVLVLPPGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L +I++ LITY SF+GR K+D F+ ++L P I LE I+SD+IKTYV L +GI
Sbjct: 181 KERIGLDDIAHEALITYHPSFTGRGKIDHAFAARRLQPRIALEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R+ I
Sbjct: 241 GIVAEMAMRDDPVGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRELI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 ARAMSG 306
>gi|383758771|ref|YP_005437756.1| LysR family transcriptional regulator [Rubrivivax gelatinosus
IL144]
gi|381379440|dbj|BAL96257.1| transcriptional regulator, LysR family [Rubrivivax gelatinosus
IL144]
Length = 314
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 224/305 (73%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTE AKAL+TSQPG+SKAI+ELEEEL +DIF RHGKR+R +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTETAKALFTSQPGISKAILELEEELGVDIFARHGKRLRRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIEIIM+E+ LK+IG++FS D G L+IATTHTQARY LP I + +FP
Sbjct: 61 EPGQEVLKSIEIIMREVANLKRIGEQFSKQDAGTLSIATTHTQARYFLPGPIAQLRKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV++ L QG P+Q+ M+ +D A++ + TE L+ + L+++PCY+W++V++VP +HPL
Sbjct: 121 KVQVVLHQGMPEQVARMLLDDVAEVGLATEALAHYEDLVTLPCYEWQHVMVVPPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L++++ PL+ Y + SGR ++D+ F+ +L P + LE I+SD+IKTYV L MG+
Sbjct: 181 VERITLEQLAAEPLVLYHATVSGRTRIDQAFARARLKPVLALEAIDSDVIKTYVRLGMGV 240
Query: 241 GIIASIAF-DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A A D D L + LFG+ ++RV K+G YLR +VY+F + LS +L+
Sbjct: 241 GIVAETAVRDDPPDSGLVARPVGQLFGSNVTRVAFKRGAYLRHFVYAFAEQLSDRLSASL 300
Query: 300 INKIL 304
+ + +
Sbjct: 301 VQRAM 305
>gi|301628856|ref|XP_002943562.1| PREDICTED: HTH-type transcriptional regulator cysB-like [Xenopus
(Silurana) tropicalis]
Length = 313
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 224/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLKSIELIMREVGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPSVARLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P Q+ M+ ++ A+I + TE L+ L+++PCY+W +V+++P HPL
Sbjct: 121 KVTISLHQATPHQVARMVIDEVAEIGMATESLAEYPDLVTLPCYEWRHVLVMPTGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L++I++ LITY +F+GR K+D+ F+ +KL P IVLE I++D+IKTYV L +GI
Sbjct: 181 KERVCLEDIAHEALITYHPTFTGRSKIDQAFATRKLQPRIVLEAIDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPVGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|319762857|ref|YP_004126794.1| LysR family transcriptional regulator [Alicycliphilus denitrificans
BC]
gi|330824937|ref|YP_004388240.1| LysR family transcriptional regulator [Alicycliphilus denitrificans
K601]
gi|317117418|gb|ADU99906.1| LysR substrate-binding protein [Alicycliphilus denitrificans BC]
gi|329310309|gb|AEB84724.1| transcriptional regulator, LysR family [Alicycliphilus
denitrificans K601]
Length = 313
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 224/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +LRSIE+IM+E+ LK+IG+++SA D+G L IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVLRSIELIMREVGNLKRIGEQYSAQDSGTLAIATTHTQARYVLPVPVAKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVNISLHQATPHEVARMVIDEVAEIGMATESLADYPDLVTLPCYEWQHVLVLPPSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L +I++ LITY SF+GR K+D+ F+ +KL P IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERVGLDDIAHEALITYHPSFTGRGKIDQAFATRKLQPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAVRDDPLGDLVVRPMGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|375106027|ref|ZP_09752288.1| transcriptional regulator [Burkholderiales bacterium JOSHI_001]
gi|374666758|gb|EHR71543.1| transcriptional regulator [Burkholderiales bacterium JOSHI_001]
Length = 316
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 227/307 (73%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQF+FV+EAVR+N NLTE AKAL+TSQPG+SKA++ELE EL +DIF RHGKR+R +T
Sbjct: 1 MNLHQFKFVQEAVRRNLNLTETAKALHTSQPGISKAVLELEAELGVDIFARHGKRLRRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+EFS D G L+IATTH+QARY LP+ + + ++P
Sbjct: 61 EPGQLVLKSIEVIMREVANLKRIGEEFSQQDAGTLSIATTHSQARYFLPEPVAQLRRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV++SL QG P Q+ M+ +D A+I I TE LS D+L+++PCY W++V++VP HPL
Sbjct: 121 KVQVSLHQGMPGQVARMLLDDVAEIGIATEALSDHDELVTLPCYDWQHVLVVPQRHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +L++++ PL+TY +F+GR ++D F+ +LTP + LE I+SD+IKTYV L MG+
Sbjct: 181 VERPTLEQLAAEPLVTYHPTFTGRSRIDSAFARARLTPTVALEAIDSDVIKTYVRLGMGV 240
Query: 241 GIIASIAF-DSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A ++ + +L + HLFG +RV ++G YLR +V++F ++LS +L R
Sbjct: 241 GIVAEMSVREDPPGGDLVARPLGHLFGRNTTRVAFRRGAYLRQFVFAFAEMLSERLTRAL 300
Query: 300 INKILNN 306
I + +++
Sbjct: 301 IQRAMSS 307
>gi|149927934|ref|ZP_01916184.1| transcriptional regulator, LysR family protein [Limnobacter sp.
MED105]
gi|149823373|gb|EDM82606.1| transcriptional regulator, LysR family protein [Limnobacter sp.
MED105]
Length = 317
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 218/311 (70%), Gaps = 5/311 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQ RFVREAVR +F+LT+AAKAL+TSQPGVSKAIIE EEEL IF RHGKRI+GLT
Sbjct: 1 MNLHQLRFVREAVRHDFSLTDAAKALFTSQPGVSKAIIEFEEELGFQIFKRHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ + ++ E ++ E+E +K++G+EF+A ++G LT+A THTQARY LP+ + F +FP
Sbjct: 61 PPGELVYQACERVLAELENIKRVGEEFAARESGQLTVAVTHTQARYVLPQAVAAFRKKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL LLQG P+Q+ + +R DQAD+A+ TE L+ L++ PCY W ++ + P D PLL
Sbjct: 121 KVKLILLQGTPEQLAQWVRKDQADLAVATEALADEPDLVTFPCYDWGHIAVAPTDSPLLK 180
Query: 181 L-----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
I+L + P+ITY+ F+GR K+D F + +VLE I++D+IKTYV
Sbjct: 181 PFASGGRQIALADFDQMPVITYETHFAGRKKIDAAFQKAGVNIDLVLEAIDADVIKTYVG 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
L +G+GIIA +AFD +DK L ++ HLFG +R+ ++QG ++R+ +Y FI + +P L
Sbjct: 241 LGLGVGIIAEVAFDVLKDKGLMAVPVDHLFGRNTTRIALRQGVFMRTLMYEFIAVFAPML 300
Query: 296 NRKFINKILNN 306
K I+++L
Sbjct: 301 TPKLIDRVLGG 311
>gi|347819918|ref|ZP_08873352.1| transcriptional regulator CysB-like protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 313
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELEEEL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGVDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +LRS+EIIM+E+ L++IG++FSA D+G L+IATTHTQARY LP + +P
Sbjct: 61 EPGQHVLRSVEIIMREVGNLRRIGEQFSAQDSGTLSIATTHTQARYVLPVPVAGLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ +L+++PCY W++V++VP +HPL
Sbjct: 121 KVHISLHQATPHEVARMVIDEVAEIGMATESLADYPELVTLPCYAWQHVLVVPNEHPLAH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L+++++ LITY SF+GR K+D+ F +KL P +VLE I+SD+IKTYV L +G+
Sbjct: 181 KERIGLEDLAHEALITYHPSFTGRGKIDQAFGARKLQPRVVLEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L LFG ++RV K+G YLR++VY F +L+S +L+R+ I
Sbjct: 241 GIVAEMAMRDDPVGDLAVRPMGQLFGQNVARVAFKRGAYLRNFVYRFAELISDRLSRELI 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 ARAMSG 306
>gi|222110914|ref|YP_002553178.1| CysB family transcriptional regulator-like protein [Acidovorax
ebreus TPSY]
gi|221730358|gb|ACM33178.1| transcriptional regulator, LysR family [Acidovorax ebreus TPSY]
Length = 313
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 225/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVLKSIELIMREVGNLKRIGEQYSAQDSGTLAIATTHTQARYVLPVPVVKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVNISLHQATPHEVARMVIDEVAEIGMATESLAEYPDLVTLPCYEWQHVLVLPPSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L++I++ LITY SF+GR K+D+ F+ +KL P IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERVGLEDIAHESLITYHPSFTGRGKIDQAFATRKLQPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPLGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|121594277|ref|YP_986173.1| transcriptional regulator CysB-like protein [Acidovorax sp. JS42]
gi|120606357|gb|ABM42097.1| transcriptional regulator, LysR family [Acidovorax sp. JS42]
Length = 313
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 224/306 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EA R+N NLTEAAKAL+TSQPGVSKAIIELE+EL +DIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L IATTHTQARY LP + + +P
Sbjct: 61 EPGQHVLKSIELIMREVGNLKRIGEQYSAQDSGTLAIATTHTQARYVLPVPVAKLREAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL Q P ++ M+ ++ A+I + TE L+ L+++PCY+W++V+++P HPL
Sbjct: 121 KVNISLHQATPHEVARMVIDEVAEIGMATESLAEYPDLVTLPCYEWQHVLVLPPSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L++I + LITY SF+GR K+D+ F+ +KL P IVLE I+SD+IKTYV L +GI
Sbjct: 181 KERVGLEDIPHESLITYHPSFTGRGKIDQAFATRKLQPRIVLEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + +L HLFG +++RV K+G YLR++VY F +LLS +L+R I
Sbjct: 241 GIVAEMAMRDDPLGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRDLI 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 ARAMTG 306
>gi|115351554|ref|YP_773393.1| transcriptional regulator CysB-like protein [Burkholderia ambifaria
AMMD]
gi|170703320|ref|ZP_02894111.1| transcriptional regulator, LysR family [Burkholderia ambifaria
IOP40-10]
gi|172060572|ref|YP_001808224.1| transcriptional regulator CysB-like protein [Burkholderia ambifaria
MC40-6]
gi|115281542|gb|ABI87059.1| transcriptional regulator, LysR family [Burkholderia ambifaria
AMMD]
gi|170131774|gb|EDT00311.1| transcriptional regulator, LysR family [Burkholderia ambifaria
IOP40-10]
gi|171993089|gb|ACB64008.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MC40-6]
Length = 308
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 216/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++AFD RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+LN
Sbjct: 241 GVVAAMAFDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLN 296
>gi|206560020|ref|YP_002230784.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia J2315]
gi|421865179|ref|ZP_16296859.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Burkholderia cenocepacia H111]
gi|444358855|ref|ZP_21160228.1| LysR substrate binding domain protein [Burkholderia cenocepacia
BC7]
gi|444366015|ref|ZP_21166116.1| LysR substrate binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198036061|emb|CAR51955.1| aliphatic sulfonate utilization regulatory protein SsuR
[Burkholderia cenocepacia J2315]
gi|358074642|emb|CCE47737.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Burkholderia cenocepacia H111]
gi|443603262|gb|ELT71285.1| LysR substrate binding domain protein [Burkholderia cenocepacia
BC7]
gi|443605394|gb|ELT73252.1| LysR substrate binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 308
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 219/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLEEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI 300
Query: 301 NKIL 304
+L
Sbjct: 301 AGLL 304
>gi|78066213|ref|YP_368982.1| transcriptional regulator CysB-like protein [Burkholderia sp. 383]
gi|77966958|gb|ABB08338.1| transcriptional regulator, LysR family [Burkholderia sp. 383]
Length = 308
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 219/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLEEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI 300
Query: 301 NKIL 304
+L
Sbjct: 301 AGML 304
>gi|134295664|ref|YP_001119399.1| transcriptional regulator CysB-like protein [Burkholderia
vietnamiensis G4]
gi|387902190|ref|YP_006332529.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Burkholderia sp. KJ006]
gi|134138821|gb|ABO54564.1| transcriptional regulator, LysR family [Burkholderia vietnamiensis
G4]
gi|387577082|gb|AFJ85798.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Burkholderia sp. KJ006]
Length = 308
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 REHLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++AFD RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+LN
Sbjct: 241 GVVAAMAFDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLN 296
>gi|116689627|ref|YP_835250.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia HI2424]
gi|170732930|ref|YP_001764877.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia MC0-3]
gi|254245492|ref|ZP_04938813.1| regulatory protein, LysR [Burkholderia cenocepacia PC184]
gi|116647716|gb|ABK08357.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
HI2424]
gi|124870268|gb|EAY61984.1| regulatory protein, LysR [Burkholderia cenocepacia PC184]
gi|169816172|gb|ACA90755.1| transcriptional regulator, LysR family [Burkholderia cenocepacia
MC0-3]
Length = 308
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 219/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RANLTLEEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI 300
Query: 301 NKIL 304
+L
Sbjct: 301 AGLL 304
>gi|402566590|ref|YP_006615935.1| transcriptional regulator CysB-like protein [Burkholderia cepacia
GG4]
gi|402247787|gb|AFQ48241.1| transcriptional regulator CysB-like protein [Burkholderia cepacia
GG4]
Length = 308
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 219/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLEEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++AFD RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN I
Sbjct: 241 GVVAAMAFDPLRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI 300
Query: 301 NKIL 304
+L
Sbjct: 301 AGLL 304
>gi|171319120|ref|ZP_02908242.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MEX-5]
gi|171095678|gb|EDT40636.1| transcriptional regulator, LysR family [Burkholderia ambifaria
MEX-5]
Length = 308
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++AFD RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN
Sbjct: 241 GVVAAMAFDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLN 296
>gi|209520385|ref|ZP_03269148.1| transcriptional regulator, LysR family [Burkholderia sp. H160]
gi|209499170|gb|EDZ99262.1| transcriptional regulator, LysR family [Burkholderia sp. H160]
Length = 308
Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 218/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK++++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVVRQFTSVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFPCYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+LN
Sbjct: 241 GVVAAMAYDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLN 296
>gi|124267135|ref|YP_001021139.1| transcriptional regulator CysB-like protein [Methylibium
petroleiphilum PM1]
gi|124259910|gb|ABM94904.1| transcriptional regulator, LysR family [Methylibium petroleiphilum
PM1]
Length = 317
Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 225/310 (72%), Gaps = 4/310 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTE AKAL+TSQPG+SKAI+ELE EL IDIF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTETAKALHTSQPGISKAILELEGELGIDIFARHGKRLKRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L +IEIIM+E+ LK+IG+E+S D G L+IATTHTQARY LP + + P
Sbjct: 61 EPGQQVLAAIEIIMREVGNLKRIGEEYSQQDAGTLSIATTHTQARYVLPGPVAALRKRHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG P+Q+ +M+ ++ A++ + TE LS + L+++PCY W++V+++PL+HPL
Sbjct: 121 KVAISLHQGTPEQVAQMLIDETAEVGLATESLSDFESLVTLPCYDWQHVVVLPLNHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ PLI+Y SF+GR ++D+ F+ + L P +VLE I+SD+IKTYV L +G+
Sbjct: 181 HERLTLEQLAQEPLISYHPSFTGRTRVDQAFATRGLKPNVVLEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSN----RDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +A + +L + A LFG ++R+ K+G YLR++VY F +LLS +L
Sbjct: 241 GIVAEMAVRDDPACAPGGDLVTRPAGQLFGNNVARLAFKRGAYLRNFVYGFAELLSDRLT 300
Query: 297 RKFINKILNN 306
R I + L
Sbjct: 301 RDLITRALQG 310
>gi|291613498|ref|YP_003523655.1| LysR family transcriptional regulator [Sideroxydans lithotrophicus
ES-1]
gi|291583610|gb|ADE11268.1| transcriptional regulator, LysR family [Sideroxydans lithotrophicus
ES-1]
Length = 308
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 221/305 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ E VR N N+++AA ALYTSQPGVSK I LEEEL IDIF+R+GKRI +T
Sbjct: 1 MNLQQLRYLNEIVRCNLNISDAANALYTSQPGVSKQIKLLEEELGIDIFVRNGKRIVAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L + ++ E E LK++G+EF D+G+LTIATTHTQARYALP ++K+FT +P
Sbjct: 61 EPGKAVLEIAQRMLHETENLKQVGQEFRTQDSGSLTIATTHTQARYALPPVVKQFTQSYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QGNP QI EM+ + DI I TE L+ D+L+++PCY+W + ++VP HPLL
Sbjct: 121 GVKLGLHQGNPTQIAEMVLGGEVDIGIATESLALYDELVTLPCYEWHHCVVVPPRHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++LK+++ YP+ITYD +F+GR K+++ F + P I L I++D+IKTYVEL +G+
Sbjct: 181 EKRLTLKKLAEYPIITYDFAFTGRNKINQAFHDAGIEPNIALTAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AF +RD++LR I A HL + +R+ I++ YLR + Y FI+L +P L R +
Sbjct: 241 GIVAQMAFIPDRDRHLRMIDAGHLIQPSTTRIAIRKNQYLRGFGYHFIELFAPHLTRDVV 300
Query: 301 NKILN 305
+K L+
Sbjct: 301 SKALH 305
>gi|351729941|ref|ZP_08947632.1| LysR family transcriptional regulator [Acidovorax radicis N35]
Length = 451
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 223/307 (72%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR+ FNLTE A L+TSQPGVS+ I ELEEEL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRRGFNLTEVAHMLHTSQPGVSRQIRELEEELGVEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L ++E ++ E + LK+ G++FS TG L++A TH+QARYALP+++++F FP
Sbjct: 61 PPGEALLPTVERLLLEADNLKRAGQDFSDSATGRLSVAATHSQARYALPQVVRDFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L+ D L+++PCY+W + I+VP HPLL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALAGYDALVTLPCYRWTHSIVVPPGHPLLE 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L ++L++++ YP+ITY+L ++GR +D F+ + + P IVL +++D+IKTYVEL MG
Sbjct: 181 LEGPVTLEQLAQYPIITYELGYTGRAHIDEAFAREGIAPDIVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D+ RD++LR I A HLF ++R+ +++G +LR Y Y FI+ P L R+
Sbjct: 241 VGIVASIAVDAERDRHLRLIDAGHLFEVNLTRLGLRRGAWLRGYAYHFIESFVPTLTREA 300
Query: 300 INKILNN 306
+ K +
Sbjct: 301 VEKAVQQ 307
>gi|107022678|ref|YP_621005.1| transcriptional regulator CysB-like protein [Burkholderia
cenocepacia AU 1054]
gi|105892867|gb|ABF76032.1| transcriptional regulator, LysR family [Burkholderia cenocepacia AU
1054]
Length = 308
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 219/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 RVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RANLTLEEIAEYPIITYDQDFTGRSHIDQAFTQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI 300
Query: 301 NKIL 304
+L
Sbjct: 301 AGLL 304
>gi|332524897|ref|ZP_08401084.1| transcriptional regulator CysB-like protein [Rubrivivax
benzoatilyticus JA2]
gi|332108193|gb|EGJ09417.1| transcriptional regulator CysB-like protein [Rubrivivax
benzoatilyticus JA2]
Length = 314
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 221/307 (71%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTE AKAL+TSQPG+SKAI+ELEEEL +DIF RHGKR+R +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTETAKALFTSQPGISKAILELEEELGVDIFARHGKRLRRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIEIIM+E+ LK+IG++FS D G L+IATTHTQARY LP + + +FP
Sbjct: 61 EPGQEVLKSIEIIMREVSNLKRIGEQFSKQDAGTLSIATTHTQARYFLPGPVAQLRKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV++ L QG P+Q+ M+ +D A+I + TE LS D L+++PCY+W++V++VP DHPL
Sbjct: 121 KVQVVLHQGMPEQVARMLLDDVAEIGLATEALSHYDDLVTLPCYEWQHVMVVPPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L++++ PL+ Y + SGR ++D+ F+ +L P + LE I+SD+IKTYV L +G+
Sbjct: 181 VERITLEQLAAEPLVLYHATVSGRTRIDQAFTRARLKPSVALEAIDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSN-RDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GI+A A + +L LFG ++RV K+G YLR +VY+F + LS +L
Sbjct: 241 GIVAETAVREDPPGGDLVWRPLGQLFGANVTRVAFKRGAYLRHFVYAFAEQLSDRLTASL 300
Query: 300 INKILNN 306
+ + +
Sbjct: 301 VQRAMAG 307
>gi|83721158|ref|YP_442997.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis E264]
gi|167620150|ref|ZP_02388781.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis Bt4]
gi|257139224|ref|ZP_05587486.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis E264]
gi|83654983|gb|ABC39046.1| cys regulon transcriptional activator [Burkholderia thailandensis
E264]
Length = 308
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RESVTLDDIAEYPIITYDQDFTGRSHIDQAFADAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLS 296
>gi|161524805|ref|YP_001579817.1| transcriptional regulator CysB-like protein [Burkholderia
multivorans ATCC 17616]
gi|189350441|ref|YP_001946069.1| transcriptional regulator CysB-like protein [Burkholderia
multivorans ATCC 17616]
gi|221197884|ref|ZP_03570930.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD2M]
gi|221204558|ref|ZP_03577575.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD2]
gi|421475188|ref|ZP_15923165.1| LysR substrate binding domain protein [Burkholderia multivorans
CF2]
gi|160342234|gb|ABX15320.1| transcriptional regulator, LysR family [Burkholderia multivorans
ATCC 17616]
gi|189334463|dbj|BAG43533.1| LysR family Cys regulon transcriptional activator [Burkholderia
multivorans ATCC 17616]
gi|221175415|gb|EEE07845.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD2]
gi|221181816|gb|EEE14217.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD2M]
gi|400230696|gb|EJO60451.1| LysR substrate binding domain protein [Burkholderia multivorans
CF2]
Length = 308
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P LN
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLN 296
>gi|377820603|ref|YP_004976974.1| LysR family transcriptional regulator [Burkholderia sp. YI23]
gi|357935438|gb|AET88997.1| LysR family transcriptional regulator [Burkholderia sp. YI23]
Length = 308
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 216/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + IE ++ + E L+++ ++F+ D G+L +ATTHTQARYALPK+I+ FT FP
Sbjct: 61 EPGKEVHQLIERMLLDAENLRRVARQFADQDNGHLVVATTHTQARYALPKVIRRFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W + ++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRYPDIVTFPCYSWHHTVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L++I+ YP++TYD F+GR +D+ F+ P IVL I++D+IKTYVEL MGI
Sbjct: 181 RENITLEQIAEYPIVTYDTDFTGRSHVDQAFASAGAIPDIVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L+
Sbjct: 241 GIVAAMAYDAKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLD 296
>gi|390572861|ref|ZP_10253054.1| transcriptional regulator CysB-like protein [Burkholderia terrae
BS001]
gi|420249950|ref|ZP_14753183.1| transcriptional regulator [Burkholderia sp. BT03]
gi|389935114|gb|EIM97049.1| transcriptional regulator CysB-like protein [Burkholderia terrae
BS001]
gi|398063247|gb|EJL54997.1| transcriptional regulator [Burkholderia sp. BT03]
Length = 308
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D G+L +ATTHTQARYALPK++++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDNGHLVVATTHTQARYALPKVVRQFTSVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QGNP+QI +MI N +ADI I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGNPQQIAQMIINGEADIGISTEALDRYPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+EI+ YP++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENITLEEIAEYPIVTYDQDFTGRSHIDQAFAKVGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A++AFD RD L ++ HLF + +R+ +++G +LR+Y Y I++ +P+L+
Sbjct: 241 GIVAAMAFDPKRDTELVALDTQHLFEASTTRIGLRKGAFLRAYAYRLIEMFAPQLH 296
>gi|323526200|ref|YP_004228353.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1001]
gi|407713518|ref|YP_006834083.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Burkholderia phenoliruptrix BR3459a]
gi|323383202|gb|ADX55293.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1001]
gi|407235702|gb|AFT85901.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Burkholderia phenoliruptrix BR3459a]
Length = 308
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFPCYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RPNLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L
Sbjct: 241 GVVAAMAYDPKRDSELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLT 296
>gi|186476383|ref|YP_001857853.1| transcriptional regulator CysB-like protein [Burkholderia phymatum
STM815]
gi|184192842|gb|ACC70807.1| transcriptional regulator, LysR family [Burkholderia phymatum
STM815]
Length = 308
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 217/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D G+L +ATTHTQARYALPK++++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDNGHLVVATTHTQARYALPKVVRQFTEVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QGNP+QI +MI N +ADI I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGNPQQIAQMIINGEADIGISTEALDRYPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++SL+EI+ YP++TYD F+GR +D F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RVNLSLEEIAEYPIVTYDQDFTGRSHIDSAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++AFD RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L+ I
Sbjct: 241 GIVAAMAFDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLHEADI 300
>gi|170692282|ref|ZP_02883445.1| transcriptional regulator, LysR family [Burkholderia graminis
C4D1M]
gi|170142712|gb|EDT10877.1| transcriptional regulator, LysR family [Burkholderia graminis
C4D1M]
Length = 308
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFPCYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RPNLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L
Sbjct: 241 GVVAAMAYDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLT 296
>gi|295676412|ref|YP_003604936.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1002]
gi|295436255|gb|ADG15425.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1002]
Length = 308
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 218/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK++++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVVRQFTSVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFPCYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L+
Sbjct: 241 GVVAAMAYDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLS 296
>gi|171060480|ref|YP_001792829.1| LysR family transcriptional regulator [Leptothrix cholodnii SP-6]
gi|170777925|gb|ACB36064.1| transcriptional regulator, LysR family [Leptothrix cholodnii SP-6]
Length = 312
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 226/307 (73%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R FNLT+ A AL+TSQPGVS+ I ELE+EL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRAVRETARSGFNLTDVAAALHTSQPGVSRQIRELEDELGVEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L +E ++ + + L++ G +F++ DTG L+IA TH+QARYALP+++++F +P
Sbjct: 61 PPGEAVLPIVERLLLDADNLRRAGADFASQDTGRLSIAATHSQARYALPQVVRDFRTLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L QG+P+Q+ EM+ + +ADI + TE L+ ++L+++PCY+W + ++VP+ HPLL
Sbjct: 121 HVTLNLHQGSPRQVAEMLLSGEADIGVATEALAQYEQLVALPCYRWTHSVVVPVGHPLLD 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++ I+L +++ P++TYD ++GR +D F+ L P +VL +++D+IKTYVEL +G
Sbjct: 181 VDGPITLAQLAREPIVTYDTGYTGRTHIDEAFARAGLKPAVVLTAMDADVIKTYVELGIG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++ASIAFD+ RD+NL+++ A HLF ++R+ I++GT+LR YVY+FI+ +P L R+
Sbjct: 241 VGLVASIAFDAERDRNLQALDAGHLFEINLTRLAIRRGTWLRGYVYAFIEAFAPTLTREA 300
Query: 300 INKILNN 306
+ + L
Sbjct: 301 VEQALTG 307
>gi|350546191|ref|ZP_08915603.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526023|emb|CCD41503.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Candidatus Burkholderia kirkii UZHbot1]
Length = 308
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIRHGKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRHGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + IE ++ + E L+++ ++F+ D G+L +ATTHTQARYALPK+I FT FP
Sbjct: 61 EPGKQVHQLIERMLLDAENLRRVARQFANQDNGHLVVATTHTQARYALPKVIHRFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W + ++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRYPDIVTFPCYSWHHTVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L++I+ YP++TYD F+GR +D+ F+ P IVL I++D+IKTYVEL MGI
Sbjct: 181 RENITLEQIAEYPIVTYDTDFTGRSHVDQAFASAGAMPDIVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A++A+D+ RD L ++ HLF + +RV +++G +L +Y Y I++ +P+L+
Sbjct: 241 GIVAAMAYDAKRDTELVALDTQHLFEASTTRVGLRKGAFLCAYSYRLIEMFAPQLD 296
>gi|221212981|ref|ZP_03585957.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD1]
gi|421471156|ref|ZP_15919473.1| LysR substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|221167194|gb|EED99664.1| HTH-type transcriptional regulator cbl [Burkholderia multivorans
CGD1]
gi|400226103|gb|EJO56204.1| LysR substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
Length = 308
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLS 296
>gi|416930829|ref|ZP_11933516.1| transcriptional regulator CysB-like protein [Burkholderia sp.
TJI49]
gi|325525769|gb|EGD03504.1| transcriptional regulator CysB-like protein [Burkholderia sp.
TJI49]
Length = 308
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 215/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLS 296
>gi|254252404|ref|ZP_04945722.1| Transcriptional regulator [Burkholderia dolosa AUO158]
gi|124895013|gb|EAY68893.1| Transcriptional regulator [Burkholderia dolosa AUO158]
Length = 308
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 215/300 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPNGHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RQNLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+ I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFDASTTRVGLRKGAFLRAYAYRLIEMFAPHLSEAEI 300
>gi|167836718|ref|ZP_02463601.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
gi|424904284|ref|ZP_18327794.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
gi|390930262|gb|EIP87664.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis MSMB43]
Length = 309
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 217/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK++++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVVRQFTEVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L + + PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIATFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++SL +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENVSLDDIAEYPIITYDQDFTGRSHIDQAFANAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+ I
Sbjct: 241 GVVAAMAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLSESEI 300
>gi|167581985|ref|ZP_02374859.1| transcriptional regulator CysB-like protein [Burkholderia
thailandensis TXDOH]
Length = 308
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI + +AD+ I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILSGEADLGISTEALDRYPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++L +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RESVTLDDIAEYPIITYDQDFTGRSHIDQAFADAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLS 296
>gi|330816797|ref|YP_004360502.1| LysR family transcriptional regulator [Burkholderia gladioli BSR3]
gi|327369190|gb|AEA60546.1| Transcriptional regulator, LysR family protein [Burkholderia
gladioli BSR3]
Length = 309
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 218/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVIRQFTDVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI + +ADI I TE L +++ PCY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILSGEADIGISTEALDRYPDIVTFPCYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ +EI+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RANLTPEEIAEYPIITYDQDFTGRSHIDQAFAKVGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D+ RD L ++ HLF + +RV +++G +LRSY Y +++ +P L I
Sbjct: 241 GVVAAMAYDAQRDSGLVALDTQHLFEASTTRVGLRKGAFLRSYAYRLLEMFAPHLTEAEI 300
>gi|53719448|ref|YP_108434.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei K96243]
gi|53723447|ref|YP_102886.1| transcriptional regulator CysB-like protein [Burkholderia mallei
ATCC 23344]
gi|67639156|ref|ZP_00438050.1| HTH-type transcriptional regulator cbl [Burkholderia mallei GB8
horse 4]
gi|76811142|ref|YP_333413.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1710b]
gi|121599043|ref|YP_993020.1| transcriptional regulator CysB-like protein [Burkholderia mallei
SAVP1]
gi|124383463|ref|YP_001026352.1| transcriptional regulator CysB-like protein [Burkholderia mallei
NCTC 10229]
gi|126441900|ref|YP_001058886.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 668]
gi|126448857|ref|YP_001080373.1| transcriptional regulator CysB-like protein [Burkholderia mallei
NCTC 10247]
gi|126452001|ref|YP_001066130.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1106a]
gi|134282359|ref|ZP_01769064.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
305]
gi|167719707|ref|ZP_02402943.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei DM98]
gi|167738700|ref|ZP_02411474.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 14]
gi|167815924|ref|ZP_02447604.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 91]
gi|167824296|ref|ZP_02455767.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 9]
gi|167845840|ref|ZP_02471348.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei B7210]
gi|167894410|ref|ZP_02481812.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 7894]
gi|167902812|ref|ZP_02490017.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei NCTC 13177]
gi|167911057|ref|ZP_02498148.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 112]
gi|167919077|ref|ZP_02506168.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BCC215]
gi|217421386|ref|ZP_03452890.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
576]
gi|226196408|ref|ZP_03791990.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
Pakistan 9]
gi|237812142|ref|YP_002896593.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei MSHR346]
gi|242316219|ref|ZP_04815235.1| cys regulon transcriptional regulator Cbl [Burkholderia
pseudomallei 1106b]
gi|254178695|ref|ZP_04885350.1| transcriptional regulator, LysR family [Burkholderia mallei ATCC
10399]
gi|254179894|ref|ZP_04886493.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
1655]
gi|254188703|ref|ZP_04895214.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
Pasteur 52237]
gi|254197551|ref|ZP_04903973.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
S13]
gi|254199828|ref|ZP_04906194.1| transcriptional regulator, LysR family [Burkholderia mallei FMH]
gi|254206152|ref|ZP_04912504.1| transcriptional regulator, LysR family [Burkholderia mallei JHU]
gi|254261084|ref|ZP_04952138.1| cys regulon transcriptional regulator Cbl [Burkholderia
pseudomallei 1710a]
gi|254297729|ref|ZP_04965182.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
406e]
gi|254358554|ref|ZP_04974827.1| transcriptional regulator, LysR family [Burkholderia mallei
2002721280]
gi|403518566|ref|YP_006652699.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BPC006]
gi|52209862|emb|CAH35834.1| transcriptional regulator Cbl [Burkholderia pseudomallei K96243]
gi|52426870|gb|AAU47463.1| cys regulon transcriptional activator [Burkholderia mallei ATCC
23344]
gi|76580595|gb|ABA50070.1| cys regulon transcriptional activator [Burkholderia pseudomallei
1710b]
gi|121227853|gb|ABM50371.1| transcriptional regulator, LysR family [Burkholderia mallei SAVP1]
gi|124291483|gb|ABN00752.1| transcriptional regulator, LysR family [Burkholderia mallei NCTC
10229]
gi|126221393|gb|ABN84899.1| cys regulon transcriptional regulator Cbl [Burkholderia
pseudomallei 668]
gi|126225643|gb|ABN89183.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
1106a]
gi|126241727|gb|ABO04820.1| transcriptional regulator, LysR family [Burkholderia mallei NCTC
10247]
gi|134246397|gb|EBA46486.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
305]
gi|147749424|gb|EDK56498.1| transcriptional regulator, LysR family [Burkholderia mallei FMH]
gi|147753595|gb|EDK60660.1| transcriptional regulator, LysR family [Burkholderia mallei JHU]
gi|148027681|gb|EDK85702.1| transcriptional regulator, LysR family [Burkholderia mallei
2002721280]
gi|157807598|gb|EDO84768.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
406e]
gi|157936382|gb|EDO92052.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
Pasteur 52237]
gi|160699734|gb|EDP89704.1| transcriptional regulator, LysR family [Burkholderia mallei ATCC
10399]
gi|169654292|gb|EDS86985.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
S13]
gi|184210434|gb|EDU07477.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
1655]
gi|217395128|gb|EEC35146.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
576]
gi|225931625|gb|EEH27630.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
Pakistan 9]
gi|237503130|gb|ACQ95448.1| HTH-type transcriptional regulator cbl [Burkholderia pseudomallei
MSHR346]
gi|238519700|gb|EEP83168.1| HTH-type transcriptional regulator cbl [Burkholderia mallei GB8
horse 4]
gi|242139458|gb|EES25860.1| cys regulon transcriptional regulator Cbl [Burkholderia
pseudomallei 1106b]
gi|254219773|gb|EET09157.1| cys regulon transcriptional regulator Cbl [Burkholderia
pseudomallei 1710a]
gi|403074208|gb|AFR15788.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei BPC006]
Length = 308
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRFPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENVTLDDIAEYPIITYDQDFTGRSHIDQAFANAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLS 296
>gi|375106736|ref|ZP_09752997.1| transcriptional regulator [Burkholderiales bacterium JOSHI_001]
gi|374667467|gb|EHR72252.1| transcriptional regulator [Burkholderiales bacterium JOSHI_001]
Length = 319
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 4/310 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREA+RQ+FNLT A+AL+TSQPGVS+ I ELE+EL I+IF R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAIRQDFNLTAVAQALHTSQPGVSRQIRELEDELGIEIFARAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG A+L IE +MQE E LK+ G++F + D G+LT+A TH+QARYALP +++F+ P
Sbjct: 61 PPGAAVLPIIERLMQEAENLKRAGEDFVSQDRGSLTVAATHSQARYALPHAVRDFSALHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+Q+ EM+ + +ADI + TE L+ L+++PCYQW + +IVP HPL
Sbjct: 121 DVSLRMHQGTPRQVAEMLLSGEADIGVATEALASYPDLVALPCYQWTHSVIVPPTHPLAQ 180
Query: 180 ---LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++++ +S++P+ITY+ ++GR +D F+ ++L IVLE +++D+IKTYVEL
Sbjct: 181 EADAGRPLTVERLSHFPIITYETGYTGRSHIDEGFARERLQANIVLEAMDADVIKTYVEL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
MG+GI+A+IA+D RD LR+I A HLF ++R+ IK+G YLRSY+Y FI+ + L
Sbjct: 241 GMGVGIVAAIAYDEQRDTRLRAIDARHLFAANMTRLAIKRGAYLRSYIYDFIQTFASPLT 300
Query: 297 RKFINKILNN 306
R ++ L N
Sbjct: 301 RPVVDAALAN 310
>gi|238027466|ref|YP_002911697.1| transcriptional regulator CysB-like protein [Burkholderia glumae
BGR1]
gi|237876660|gb|ACR28993.1| transcriptional regulator CysB-like protein [Burkholderia glumae
BGR1]
Length = 309
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 218/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFVRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI + +AD+ I TE L +++ PCY W + ++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILSGEADVGISTEALDRYPDIVTFPCYSWHHTVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+EI+ +P+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLTLEEIAEHPIITYDQDFTGRSHIDQAFAKAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D+ RD L ++ HLF + +RV +++G +LRSY Y +++ +P L I
Sbjct: 241 GVVAAMAYDAQRDAGLVALDTQHLFEASTTRVGLRKGAFLRSYAYRLLEMFAPHLTEAEI 300
>gi|413962779|ref|ZP_11402006.1| transcriptional regulator CysB-like protein [Burkholderia sp. SJ98]
gi|413928611|gb|EKS67899.1| transcriptional regulator CysB-like protein [Burkholderia sp. SJ98]
Length = 308
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 216/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + IE ++ + E L+++ ++F+ D G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKEVHQLIERMLLDAENLRRVARQFADQDNGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ CY W + ++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRYPDIVTFACYSWHHTVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L++I+ YP++TYD F+GR +D+ F+ P IVL I++D+IKTYVEL MGI
Sbjct: 181 RENITLEQIAEYPIVTYDNDFTGRSHVDQAFASAGAMPDIVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L+
Sbjct: 241 GIVAAMAYDAKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLD 296
>gi|91783353|ref|YP_558559.1| transcriptional regulator CysB-like protein [Burkholderia
xenovorans LB400]
gi|187923767|ref|YP_001895409.1| transcriptional regulator CysB-like protein [Burkholderia
phytofirmans PsJN]
gi|385209806|ref|ZP_10036674.1| transcriptional regulator [Burkholderia sp. Ch1-1]
gi|91687307|gb|ABE30507.1| transcriptional regulator, LysR family [Burkholderia xenovorans
LB400]
gi|187714961|gb|ACD16185.1| transcriptional regulator, LysR family [Burkholderia phytofirmans
PsJN]
gi|385182144|gb|EIF31420.1| transcriptional regulator [Burkholderia sp. Ch1-1]
Length = 308
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 217/296 (73%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RPNLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+LN
Sbjct: 241 GVVAAMAYDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLN 296
>gi|167587261|ref|ZP_02379649.1| transcriptional regulator, LysR family protein [Burkholderia
ubonensis Bu]
Length = 308
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 216/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK++++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVVRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +AD+ I TE L +++ PCY W + ++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++SL +++ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RENLSLDDVAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+ I
Sbjct: 241 GVVAAMAYDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLSEAEI 300
>gi|307729530|ref|YP_003906754.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1003]
gi|307584065|gb|ADN57463.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1003]
Length = 308
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 216/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT FP
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI N +ADI I TE L +++ CY W +V++VP DHPL+
Sbjct: 121 KVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVTFACYSWHHVVVVPKDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L EI+ +P++TYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 RPNLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P+L
Sbjct: 241 GVVAAMAYDPKRDTELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLT 296
>gi|167562839|ref|ZP_02355755.1| transcriptional regulator CysB-like protein [Burkholderia
oklahomensis EO147]
gi|167570017|ref|ZP_02362891.1| transcriptional regulator CysB-like protein [Burkholderia
oklahomensis C6786]
Length = 308
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 216/296 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ + IE ++ + E L+++ ++++ D+G+L +ATTHTQARYALPK+I++FT +P
Sbjct: 61 EPGKAVHQLIERMLLDAENLRRVARQYADQDSGHLVVATTHTQARYALPKVIRQFTDVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P+QI +MI + +ADI I TE L +++ PCY W +V++VP HPL+
Sbjct: 121 KVHLALRQGSPQQIAQMILSGEADIGISTEALDRYPDIVTFPCYSWHHVVVVPKGHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGI
Sbjct: 181 REKVTLDDIAEYPIITYDQDFTGRSHIDQAFANAGAVPDVVLTAIDADVIKTYVELGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A++A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 GVVAAMAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLS 296
>gi|333912653|ref|YP_004486385.1| LysR family transcriptional regulator [Delftia sp. Cs1-4]
gi|333742853|gb|AEF88030.1| transcriptional regulator, LysR family [Delftia sp. Cs1-4]
Length = 312
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 223/307 (72%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R+VRE VR+ ++LTE A L+TSQPGVS+ I ELEEEL ++IFIR GKR+ GLT
Sbjct: 1 MNFQQLRYVRETVRRGYSLTEVAHTLHTSQPGVSRQIRELEEELGVEIFIRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L +E +M E + L+++G +FSA + G L+IA TH+QARYALP ++++F ++P
Sbjct: 61 PPGEALLPIVERLMLEADNLRRVGADFSASEQGRLSIAATHSQARYALPHVVRDFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG+P+Q+ +M+R+ +ADI + TE L+ + L+++PCY+W + ++VP HPLL
Sbjct: 121 QVRLHLHQGSPEQVAQMLRSGEADIGVATEALAGYEGLVALPCYRWTHGVVVPPGHPLLQ 180
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+++L+ +S +P+ITY+ ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 181 SQQALTLEALSRFPIITYEQGYTGRAHIDEAFAREGLEPDVVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+A D+ RD+ LR++ A HLF +R+ +++G +LR Y Y+FI+ P L R+
Sbjct: 241 VGIVASVALDAERDQGLRTLDAGHLFEVNTTRLGLRKGAWLRGYAYAFIETFVPTLTREV 300
Query: 300 INKILNN 306
+ + +
Sbjct: 301 VEQAVRQ 307
>gi|94310321|ref|YP_583531.1| transcriptional regulator CysB-like protein [Cupriavidus
metallidurans CH34]
gi|93354173|gb|ABF08262.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Cupriavidus metallidurans CH34]
Length = 316
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 214/304 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G EF+ TG LT+ATTHTQARYALPK+++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEFAGRHTGRLTVATTHTQARYALPKVVQSFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE ++ L S Y W++VI+V DHPL
Sbjct: 121 HVTLALQEASPAHIVELLLTGQADIGIATEAVASEAGLTSFEAYSWQHVIVVSPDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++I+N+PLITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDIANFPLITYDAGFTGRRKIDGAFAEAGLQPEIVLTAMDADVIKTYAELELGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D+ +D+ L ISA HLF ++ V +++G YLR Y ++FI + +P L+R +
Sbjct: 241 GIIASMAYDARKDEGLVRISADHLFEPNVTSVAVRRGAYLRGYAHAFINMFAPHLSRDTV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 STAL 304
>gi|198282983|ref|YP_002219304.1| LysR family transcriptional regulator [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667533|ref|YP_002425187.1| sulfur assimilation LysR family transcriptional regulator
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247504|gb|ACH83097.1| transcriptional regulator, LysR family [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519746|gb|ACK80332.1| sulfur assimilation transcriptional regulator, LysR family
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 320
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 217/306 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q RF+ VRQNFN + AA +LYTSQPGVSK I LEEE+++ +F+R GKRI G+T
Sbjct: 1 MNLQQLRFICAVVRQNFNASAAADSLYTSQPGVSKQIQLLEEEINVALFVRKGKRIIGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I + ++ +IE ++K+G+EFS D G IATTHTQARY+LPK IK FT ++P
Sbjct: 61 PAGEQIFTFAQRVVGDIENIRKVGQEFSQGDRGEFVIATTHTQARYSLPKAIKTFTERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QGNP QI EM+ +AD+AI TE L+ L+++PCYQW V+I P HPLL
Sbjct: 121 GVQLRLRQGNPTQIAEMLAAGEADVAIATESLNSYAGLVALPCYQWNRVVITPTGHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TYD +F+GR +D+ F+ + L+P IVL I+SD+IK YVEL +GI
Sbjct: 181 SQPLTLEAVAAYPIVTYDQAFAGRSLIDKTFANRGLSPNIVLSAIDSDVIKAYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D RD L I ASHLF + + + ++QGTYLR Y+Y+FI L +P L+R +
Sbjct: 241 GIVAKMAYDPVRDIKLEVIDASHLFDPSTTYLALRQGTYLRGYLYTFIALYAPHLDRNTV 300
Query: 301 NKILNN 306
++ L++
Sbjct: 301 DRALDS 306
>gi|430808822|ref|ZP_19435937.1| transcriptional regulator CysB-like protein [Cupriavidus sp. HMR-1]
gi|429498797|gb|EKZ97298.1| transcriptional regulator CysB-like protein [Cupriavidus sp. HMR-1]
Length = 316
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 214/304 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G EF+ TG LT+ATTHTQARYALPK+++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEFAGRHTGRLTVATTHTQARYALPKVVQSFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE ++ L S Y W++VI+V DHPL
Sbjct: 121 HVTLALQEASPAHIVELLLTGQADIGIATEAVASEAGLTSFEAYSWQHVIVVSPDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++I+N+PLITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDIANFPLITYDAGFTGRRKIDGAFAEAGLQPEIVLTAMDADVIKTYAELELGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D+ +D+ L ISA HLF ++ V +++G YLR Y ++FI + +P L+R +
Sbjct: 241 GIVASMAYDARKDEGLVRISADHLFEPNVTSVAVRRGAYLRGYAHAFINMFAPHLSRDTV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 STAL 304
>gi|160901042|ref|YP_001566624.1| LysR family transcriptional regulator [Delftia acidovorans SPH-1]
gi|160366626|gb|ABX38239.1| transcriptional regulator, LysR family [Delftia acidovorans SPH-1]
Length = 354
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 223/307 (72%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R+VRE VR+ ++LTE A L+TSQPGVS+ I ELEEEL ++IFIR GKR+ GLT
Sbjct: 43 MNFQQLRYVRETVRRGYSLTEVAHTLHTSQPGVSRQIRELEEELGVEIFIRAGKRLTGLT 102
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L +E +M E + L+++G +FSA + G L+IA TH+QARYALP ++++F ++P
Sbjct: 103 PPGEALLPIVERLMLEADNLRRVGADFSASEQGRLSIAATHSQARYALPHVVRDFRQRYP 162
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG+P+Q+ +M+R+ +ADI + TE L+ + L+++PCY+W + ++VP HPLL
Sbjct: 163 QVRLHLHQGSPEQVAQMLRSGEADIGVATEALAGYEGLVALPCYRWTHGVVVPPGHPLLQ 222
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+++L+ +S +P+ITY+ ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 223 SQQALTLEALSRFPIITYEQGYTGRAHIDEAFAREGLEPDVVLTAMDADVIKTYVELDMG 282
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+A D+ RD+ LR++ A HLF +R+ +++G +LR Y Y+FI+ P L R+
Sbjct: 283 VGIVASVALDAERDQGLRTLDAGHLFEVNTTRLGLRKGAWLRGYAYAFIETFVPTLTREV 342
Query: 300 INKILNN 306
+ + +
Sbjct: 343 VEQAVRQ 349
>gi|218667331|ref|YP_002425732.1| LysR family transcriptional regulator [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218519544|gb|ACK80130.1| transcriptional regulator, LysR family [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 320
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 216/306 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q RF+ VRQNFN + AA +LYTSQPGVSK I LEEE+++ +F+R GKRI G+T
Sbjct: 1 MNLQQLRFICAVVRQNFNASAAADSLYTSQPGVSKQIQLLEEEINVALFVRKGKRIIGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I + ++ +IE ++K+G+EFS D G IATTHTQARY+LP+ IK FT ++P
Sbjct: 61 PAGEQIFTFAQRVVGDIENIRKVGQEFSQGDRGEFVIATTHTQARYSLPRAIKTFTERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QGNP Q+ EM+ +AD+A+ TE L+ L+++PCYQW V+I P HPLL
Sbjct: 121 GVQLRLRQGNPTQVAEMLAAGEADVAVATESLNSYAGLVALPCYQWNRVVITPTGHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ +P++TYD +F+GR +D+ F+ L+P IVL I+SD+IK YVEL +GI
Sbjct: 181 SQPLTLEAVAAHPIVTYDQAFAGRSLIDKTFANHGLSPNIVLSAIDSDVIKAYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D RD L I ASHLF + + + ++QGTYLR Y+Y+FI L +P L+R +
Sbjct: 241 GIVAQMAYDPVRDTKLEVIDASHLFDPSTTYLALRQGTYLRGYLYTFIALYAPHLDRNTV 300
Query: 301 NKILNN 306
++ L++
Sbjct: 301 DQALDS 306
>gi|424776458|ref|ZP_18203439.1| transcriptional regulator CysB-like protein [Alcaligenes sp.
HPC1271]
gi|422888278|gb|EKU30667.1| transcriptional regulator CysB-like protein [Alcaligenes sp.
HPC1271]
Length = 316
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 226/309 (73%), Gaps = 3/309 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ QFRFVRE +R+NFNLTEAA++LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNIQQFRFVRETIRRNFNLTEAARSLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ I+ IM+EI+ LK++ +F+ D G L IA TH QARY LPK+I EF +FP
Sbjct: 61 RPGEAVAEVIDRIMREIDNLKRVSDDFARRDEGTLVIACTHAQARYLLPKVIPEFRRRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL +G+P + +M+ ++QAD+AI TE L+ + L+++P Y WE+ ++V DHPL
Sbjct: 121 KVHMSLAEGSPPVLAQMVIHEQADVAIATETLALTPGLVALPVYTWEHTVVVTPDHPLAD 180
Query: 181 LNS---ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELR 237
L + +S++ ++ YP++TYD +FSGR +D F+ +TP IVLE I++D+IKTYV++
Sbjct: 181 LPANKQLSIETLAQYPIVTYDHAFSGRGSIDEAFAKHGITPDIVLEAIDADVIKTYVDVG 240
Query: 238 MGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
+GIGIIA IAFD RDK L + A HLFG ++V +K G +LR Y++ +++L+P+L R
Sbjct: 241 LGIGIIAGIAFDPRRDKGLVGLPAGHLFGAHHTKVAVKAGAFLRDYIFELLEMLAPELTR 300
Query: 298 KFINKILNN 306
+ L+
Sbjct: 301 DVVLSALDE 309
>gi|386861867|ref|YP_006274816.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026b]
gi|418387418|ref|ZP_12967284.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354a]
gi|418534010|ref|ZP_13099861.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026a]
gi|418541052|ref|ZP_13106553.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258a]
gi|418547292|ref|ZP_13112455.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258b]
gi|418553474|ref|ZP_13118297.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354e]
gi|385359207|gb|EIF65181.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258a]
gi|385360259|gb|EIF66198.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026a]
gi|385361762|gb|EIF67636.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1258b]
gi|385371627|gb|EIF76794.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354e]
gi|385376393|gb|EIF81081.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 354a]
gi|385658995|gb|AFI66418.1| transcriptional regulator CysB-like protein [Burkholderia
pseudomallei 1026b]
Length = 303
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 144/291 (49%), Positives = 214/291 (73%)
Query: 6 FRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQA 65
RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT+PG+A
Sbjct: 1 MRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLTEPGKA 60
Query: 66 ILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLS 125
+ + IE ++ + E L+++ ++F+ D+G+L +ATTHTQARYALPK+I++FT +PKV L+
Sbjct: 61 VHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVYPKVHLA 120
Query: 126 LLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSIS 185
L QG+P+QI +MI N +AD+ I TE L +++ PCY W +V++VP HPL+ +++
Sbjct: 121 LRQGSPQQIAQMILNGEADLGISTEALDRFPDIVTFPCYSWHHVVVVPKGHPLVGRENVT 180
Query: 186 LKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIAS 245
L +I+ YP+ITYD F+GR +D+ F+ P +VL I++D+IKTYVEL MGIG++A+
Sbjct: 181 LDDIAEYPIITYDQDFTGRSHIDQAFANAGAVPDVVLTAIDADVIKTYVELGMGIGVVAA 240
Query: 246 IAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+A+D+ RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L+
Sbjct: 241 MAYDAQRDTGLVALDTQHLFEASTTRVGLRRGAFLRAYAYRLIEMFAPHLS 291
>gi|393758400|ref|ZP_10347221.1| transcriptional regulator CysB-like protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393164819|gb|EJC64871.1| transcriptional regulator CysB-like protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 315
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 226/309 (73%), Gaps = 3/309 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ QFRFVRE +R+NFNLTEAA++LYTSQPGVSKAIIE E+EL I IF RHGKRI+GLT
Sbjct: 1 MNIQQFRFVRETIRRNFNLTEAARSLYTSQPGVSKAIIEFEDELGIKIFERHGKRIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ I+ IM+EI+ LK++ +F+ D G L IA TH QARY LPK+I EF +FP
Sbjct: 61 RPGEAVAEVIDRIMREIDNLKRVSDDFARRDEGTLVIACTHAQARYLLPKVIPEFRRRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL +G+P + +M+ ++QAD+AI TE L+ + L+++P Y WE+ ++V DHPL
Sbjct: 121 KVHMSLAEGSPPVLAQMVIHEQADVAIATETLALTPGLVALPVYTWEHTVVVTPDHPLAD 180
Query: 181 LNS---ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELR 237
L + +S++ ++ YP++TYD +FSGR +D F+ +TP IVLE I++D+IKTYV++
Sbjct: 181 LPANKQLSIETLAQYPIVTYDHAFSGRGSIDEAFAKHGITPDIVLEAIDADVIKTYVDVG 240
Query: 238 MGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
+GIGIIA IAFD RDK L + A HLFG ++V +K G +LR Y++ +++L+P+L R
Sbjct: 241 LGIGIIAGIAFDPRRDKGLVGLPAGHLFGAHHTKVAVKAGAFLRDYIFELLEMLAPELTR 300
Query: 298 KFINKILNN 306
+ L+
Sbjct: 301 DVVLSALDE 309
>gi|393777047|ref|ZP_10365341.1| CysB family transcriptional regulator [Ralstonia sp. PBA]
gi|392716404|gb|EIZ03984.1| CysB family transcriptional regulator [Ralstonia sp. PBA]
Length = 309
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 216/306 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E LK G+EF+ +G LT+ATTHTQARYALP++++ F +FP
Sbjct: 61 EPGREIVRIVERLLLEAENLKHAGEEFAGSSSGKLTVATTHTQARYALPRVVQAFRREFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L+L + +P I EM+ QADI + TE ++ L S Y W++V++V HPL
Sbjct: 121 QVTLALQETSPTHIVEMLLTGQADIGVATEAVAGEAGLASFEAYTWQHVLVVAHGHPLTA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L S +L +++ YP+ITYD F+GR ++D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LASPTLADVACYPVITYDAGFTGRNRIDSAFANAGLKPEIVLTALDADVIKTYAELDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D +D L I+A+HLF +R+ +++G YLR Y ++FI+L +P+L+R+ I
Sbjct: 241 GIVASVAYDPRKDTGLHCIAAAHLFEQNTTRIAVRRGAYLRGYTHAFIRLFAPQLSREEI 300
Query: 301 NKILNN 306
+ +N
Sbjct: 301 VQTVNG 306
>gi|73541655|ref|YP_296175.1| transcriptional regulator CysB-like protein [Ralstonia eutropha
JMP134]
gi|72119068|gb|AAZ61331.1| regulatory protein, LysR:LysR, substrate-binding protein [Ralstonia
eutropha JMP134]
Length = 315
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 212/306 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G EF+ TG LT+ATTHTQARYALPK+++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEFAGRHTGRLTVATTHTQARYALPKVVQSFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE L+ L S Y W++V++V DHPL L
Sbjct: 121 HVTLALQEASPTHIVELLLTGQADIGIATEALATEAGLTSFDAYTWQHVLVVSPDHPLTL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +L++++ +PLITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 VPEPTLEDLAGFPLITYDAGFTGRRKIDGAFAEAGLQPEIVLTALDADVIKTYAELELGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D L ISA HLF + + V +++G YLR Y ++FI + +P L+R +
Sbjct: 241 GIIASMAYDERKDSGLVRISADHLFDSNTTSVALRRGAYLRDYAHAFINMFAPHLSRDTV 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 SSALGE 306
>gi|407938759|ref|YP_006854400.1| LysR family transcriptional regulator [Acidovorax sp. KKS102]
gi|407896553|gb|AFU45762.1| LysR family transcriptional regulator [Acidovorax sp. KKS102]
Length = 317
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 217/303 (71%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR+ FNLTE A L+TSQPGVS+ I ELEEEL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRRGFNLTEVAHILHTSQPGVSRQIRELEEELGVEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L ++E ++ E + L++ G++FS G L++A TH+QARYALP+++++F FP
Sbjct: 61 PPGEVLLPTVERLLLEADNLRRAGQDFSDSAQGRLSVAATHSQARYALPQVVRDFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L+ D L+++PCY+W + I+VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALAGYDALVTLPCYRWTHSIVVPPGHRLLD 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L S ++L++++ YP+ITY+L ++GR +D F+ + + P IVL +++D+IKTYVEL MG
Sbjct: 181 LPSPVTLEQLAQYPIITYELGYTGRAHIDEAFAREGIAPDIVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D RD++LR I A HLF ++R+ +++G +LR Y Y FI+ P L R
Sbjct: 241 VGIVASIAVDEERDRHLRLIDAGHLFEVNLTRLGLRRGAWLRGYAYQFIESFVPTLTRDV 300
Query: 300 INK 302
+ K
Sbjct: 301 VQK 303
>gi|260221629|emb|CBA30384.1| HTH-type transcriptional regulator cbl [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 313
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 219/305 (71%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR +NLTE A L+TSQPGVS+ I ELEEEL ++IF R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRCGYNLTEVAGMLHTSQPGVSRQIRELEEELGVEIFNRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E ++ + E LK+ G+++S+ G L++A TH+QARYALP ++K+F +FP
Sbjct: 61 PPGKDLLPIVERLLLDAENLKRAGQDYSSQLEGQLSVAATHSQARYALPHVVKDFRDKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L L QG+PKQ+ M+ + +ADI + TE L+ +L+++PCY+W + I+VP HPLL
Sbjct: 121 KVTLHLHQGSPKQVAAMLLSGEADIGVATEALADYAQLVTLPCYRWTHSIVVPPGHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++L+++++YP+ITY+L ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 181 QTEPVTLRQLAHYPIITYELGYTGRAHIDNAFAAESLRPDVVLTAMDADVIKTYVELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+A D+ RD+NLR + A HLF ++R+ +++G +LR Y YSFI+ P LN+
Sbjct: 241 VGIVASVALDAERDRNLRILDAGHLFQVNVTRLGLRKGVWLRGYAYSFIETFVPTLNKAV 300
Query: 300 INKIL 304
+ + L
Sbjct: 301 VARTL 305
>gi|395008003|ref|ZP_10391694.1| transcriptional regulator [Acidovorax sp. CF316]
gi|394313948|gb|EJE50905.1| transcriptional regulator [Acidovorax sp. CF316]
Length = 313
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 222/306 (72%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR FNLTE A LYTSQPGVS+ I ELEEEL I+IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRSGFNLTEVASILYTSQPGVSRQIRELEEELGIEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L +E ++ + + L++ G+++SA G L+IA TH+QARYALP+++++F FP
Sbjct: 61 PPGEAVLPIVERLLHDADNLRRAGQDYSASHEGRLSIAATHSQARYALPQVVRDFRAMFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V L L QG+PKQ+ EM+ + +ADI + TE L+ D L+++PCY+W + I+VP DHPLL
Sbjct: 121 QVSLHLHQGSPKQVAEMLLSGEADIGVATEALAHYDALVTLPCYRWTHSIVVPPDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L ++L++++ YP+ITY+L ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 181 LTEPVTLQQLTEYPIITYELGYTGRAHIDEAFAREGLRPDVVLSAMDADVIKTYVELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D RD+ LR + A HLF ++R+ +++GT+LR Y YSFI+ +P L R+
Sbjct: 241 VGIVASIAVDPERDRQLRMLDARHLFEVNVTRLAVRKGTWLRGYAYSFIETFAPTLQREA 300
Query: 300 INKILN 305
+ K +
Sbjct: 301 VEKAVR 306
>gi|325981339|ref|YP_004293741.1| LysR family transcriptional regulator [Nitrosomonas sp. AL212]
gi|325530858|gb|ADZ25579.1| transcriptional regulator, LysR family [Nitrosomonas sp. AL212]
Length = 309
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 221/306 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E RQ+ NL++AAK L+TSQP +SK I LE EL +DIF+R+GKRI +T
Sbjct: 1 MKLQQLRYLCETARQDMNLSKAAKNLHTSQPAISKQIQMLENELGVDIFLRNGKRIVQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PGQ I+++ ++++ + LKKI +EF+ G LTIATTHTQARYALP +IK FT ++P
Sbjct: 61 PPGQLIIKTATRMLRDADNLKKIAQEFTNEAGGTLTIATTHTQARYALPAVIKRFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL L QG+P QI+ ++ + +AD+AI TE + +L+ +PCY+W +IV HPLL
Sbjct: 121 KVKLILRQGSPMQISALVTSGEADVAIATEAIEHFQELVMLPCYEWNRCVIVLPKHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ YP+ITYD +F+GR K+++ F+ L P +VL I+SDIIKTYVEL +G+
Sbjct: 181 IKKLTLEAINQYPIITYDFAFTGRSKINQAFANCGLEPNVVLTAIDSDIIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++AFD+ RDKNLRSI ASHLF ++ +R+ I + +YLR Y++ FI++ +P LN I
Sbjct: 241 GILANMAFDAKRDKNLRSIDASHLFESSTTRIGISRHSYLRGYIFDFIEMFAPHLNYASI 300
Query: 301 NKILNN 306
L N
Sbjct: 301 QARLEN 306
>gi|241767715|ref|ZP_04765338.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN]
gi|241361307|gb|EER57860.1| transcriptional regulator, LysR family [Acidovorax delafieldii 2AN]
Length = 315
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 217/306 (70%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR+ FNLTE A L+TSQPGVS+ I ELEEEL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRRGFNLTEVATMLHTSQPGVSRQIRELEEELGVEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E ++ E + L++ G +FSA G L++A TH+QARYALP+++++F FP
Sbjct: 61 PPGETLLPIVERLLLESDNLRRAGHDFSASAQGRLSVAATHSQARYALPQVVRDFRTLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L+ + L+++PCY+W + I+VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALAGYEALVTLPCYRWTHSIVVPPGHALLQ 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++L++++ YP++TY+L ++GR +D F+ + L P IVL +++D+IKTYVEL MG
Sbjct: 181 QGEPVTLEQLARYPIVTYELGYTGRAHIDEAFAREGLAPDIVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D RD++LR I A HLF ++R+ +++G +LR Y Y FI+ P L R+
Sbjct: 241 VGIVASIAVDPERDRHLRMIDAGHLFEVNLTRLALRKGAWLRGYAYRFIESFVPTLTRER 300
Query: 300 INKILN 305
+ + +
Sbjct: 301 VEQAMR 306
>gi|421750764|ref|ZP_16187877.1| transcriptional regulator CysB-like protein [Cupriavidus necator
HPC(L)]
gi|409770078|gb|EKN52916.1| transcriptional regulator CysB-like protein [Cupriavidus necator
HPC(L)]
Length = 318
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 211/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ I+R +E ++ E E L++ G EF+ TG LT+ATTHTQARYALPK++ EF +P
Sbjct: 61 APGREIVRIVERLLLEAENLRQAGDEFAGRHTGRLTVATTHTQARYALPKVVTEFRRAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ + QADI I TE L+ L + Y W +V++V DHPL
Sbjct: 121 HVTLALQEASPNHIVELLLSGQADIGIATEALASEPSLTAFDAYSWRHVLVVAPDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++++ +P+ITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDLAGFPIITYDAGFTGRRKIDSAFAQAGLQPEIVLTALDADVIKTYAELDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D+ +D L ISA HLF + V +++G YLR Y ++FI+L +P+L+ + +
Sbjct: 241 GIIASMAYDARKDSGLVRISADHLFAPNTTSVAVRRGAYLRGYAHAFIQLFAPQLSEQAV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 SNAL 304
>gi|56476907|ref|YP_158496.1| transcriptional regulator CysB-like protein [Aromatoleum aromaticum
EbN1]
gi|56312950|emb|CAI07595.1| Transcriptional regulator, CysB [Aromatoleum aromaticum EbN1]
Length = 313
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 221/304 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ E R+ N++EAA+AL+TSQPGVSK I E EL +D+F+RHGKR+ +T
Sbjct: 1 MNLQQLRYIYEVARRGLNVSEAAEALFTSQPGVSKQIRLFETELGVDVFVRHGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L E ++++I+ L+++G EF+ TG+L+IATTHTQARY LP+II++F +FP
Sbjct: 61 DPGRQVLALAERVLRDIDNLRQVGDEFTNESTGSLSIATTHTQARYVLPRIIRDFMQRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKLSL QGNP+Q+ +M+ + +AD+AI TE ++ D+L+ +PCYQW I+ HP+L
Sbjct: 121 QVKLSLHQGNPRQVCDMVMSGEADLAIATEAIADYDELVMLPCYQWNRCIVATPRHPILK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ YPLITYD +F+GR +++ F + L P +VL ++SD+IKTYV + +GI
Sbjct: 181 EHPLTLEAIARYPLITYDDAFTGRSLINKAFLGRGLRPNVVLTALDSDVIKTYVSMDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ DK L A+HLF ++ +RV +++ YLR YVY+FI+L +P L R+ I
Sbjct: 241 GILARMAFDAAADKTLGMSDAAHLFESSTTRVGLRRNAYLRGYVYAFIELFAPHLTRRMI 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DVAL 304
>gi|82702274|ref|YP_411840.1| transcriptional regulator CysB-like protein [Nitrosospira
multiformis ATCC 25196]
gi|82410339|gb|ABB74448.1| transcriptional regulator, LysR family [Nitrosospira multiformis
ATCC 25196]
Length = 308
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 218/300 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E Q NL++AA+ L+TSQPG+SK I LE EL +DIF+R+GKR+ T
Sbjct: 1 MKLQQLRYLCEVANQGLNLSKAAEILHTSQPGISKQIRLLENELGVDIFVRNGKRVVETT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+AIL E ++++ + LK++G+EF+ +G+LTIATTHTQARYALP I+ FT ++P
Sbjct: 61 PPGRAILEIAERMLRDAKNLKQVGQEFANEASGSLTIATTHTQARYALPSAIQHFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+L L QGNP QI E++ + ADIAI TE + +L+ +PCYQW +IVP HPLL
Sbjct: 121 KVRLVLRQGNPTQIAELVTSGVADIAIATEAIELFSELVMLPCYQWNRCVIVPPRHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ I+ +P+ITYD +F+GR K+++ F + L P +VL I++D+IKTYVEL +GI
Sbjct: 181 LKGLTLEAIAEHPIITYDFAFTGRSKINQAFDAKGLVPNVVLTAIDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AF+ +RD++LR+I ASHLF + +R+ I + +YLR YVY FI++ +P L+R +
Sbjct: 241 GILAQMAFEPSRDRHLRAIDASHLFEPSTTRIGISRNSYLRKYVYDFIEMFAPHLDRATV 300
>gi|427400985|ref|ZP_18892223.1| hypothetical protein HMPREF9710_01819 [Massilia timonae CCUG 45783]
gi|425719881|gb|EKU82808.1| hypothetical protein HMPREF9710_01819 [Massilia timonae CCUG 45783]
Length = 309
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 212/305 (69%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREA R++FNLTE A AL+TSQPGVS+ I ELEEEL + IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSVREAARRDFNLTEVANALFTSQPGVSRQIRELEEELGVVIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ ILR +E ++ E E L++ +E++A D+G LT+A THTQARYALP++++ F FP
Sbjct: 61 PPGKGILRIVEKLLVEAENLQQASREYAAQDSGTLTVAVTHTQARYALPQVVQSFRAAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+++L Q P+ I E + + +ADI I TE LS L+S PCY+W ++++ P HP+
Sbjct: 121 NVRIALQQSAPEHIAEWVASGKADIGIATEGLSAFPDLVSFPCYRWSHLVVAPEGHPIFS 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
S + L++++ +PLITYD+ F+GR +D F L P IVL ++SD+IK YV L +G
Sbjct: 181 SGSPLRLEDLAEHPLITYDVGFTGRSHIDAAFVEAGLAPDIVLTAMDSDVIKQYVSLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+AFD RDK LR+I ASHLF ++R+ +++G+YLR+Y + FI+ + R
Sbjct: 241 VGIVASMAFDHGRDKGLRAIEASHLFAQNVTRLAVRRGSYLRAYAFHFIERFAQGYTRAD 300
Query: 300 INKIL 304
I K +
Sbjct: 301 IEKAI 305
>gi|71907754|ref|YP_285341.1| transcriptional regulator CysB-like protein [Dechloromonas
aromatica RCB]
gi|71847375|gb|AAZ46871.1| regulatory protein, LysR:LysR, substrate-binding protein
[Dechloromonas aromatica RCB]
Length = 311
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 212/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQ+FNLTE A ALYTSQPGVSK I +LE+EL I++FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQDFNLTEVANALYTSQPGVSKHIKDLEDELGIEVFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ ++ +E I+ + + L++I +F++ +TG+ +ATTHTQARYALPKII+ F +P
Sbjct: 61 EPGKELVGVVERILLDTQNLRRIADQFASRETGHFVVATTHTQARYALPKIIQWFKADYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+LLQG+P++I E++ QAD+ I TE L +L S P Y W + +IVP HPLL
Sbjct: 121 KVHLTLLQGSPREIAELLETGQADVGIATESLDNVPELASFPFYSWHHAVIVPDGHPLLN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ + YP+ITY F+GR +D+ F+ + P IVL I++D+IKTYV L +G+
Sbjct: 181 LEKVTLEALGEYPIITYHEGFTGRAHVDKGFADAGIVPDIVLSAIDADVIKTYVSLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D +D+NL I LF +R+ +++GTYLRSYV++FI+ + P L I
Sbjct: 241 GIVASVAYDQEQDRNLALIPVPDLFPANTTRIAVRRGTYLRSYVHAFIEKVCPDLGEDAI 300
Query: 301 NKIL 304
L
Sbjct: 301 KAAL 304
>gi|253996380|ref|YP_003048444.1| transcriptional regulator CysB-like protein [Methylotenera mobilis
JLW8]
gi|253983059|gb|ACT47917.1| transcriptional regulator, LysR family [Methylotenera mobilis JLW8]
Length = 308
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 212/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M LHQ R++ E V+Q N+T AA ALYTSQPGVSK I +EEEL + IF R+GKR+ GLT
Sbjct: 1 MKLHQLRYLHEVVKQGLNITSAADALYTSQPGVSKQIQLIEEELGLQIFKRNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PGQ I+ + +M++IE +K++G EFS +TG LTIATTHTQARY LP +K F +P
Sbjct: 61 VPGQQIVMLADKVMRDIENIKRVGDEFSDVETGTLTIATTHTQARYKLPAAVKAFMTNYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL++ QGNP Q+ E + + +ADI I TE +S + L+ +PCY W ++VP HPLL
Sbjct: 121 RVKLNIHQGNPSQVAEQVESGEADIGIATESISERESLLCLPCYHWNRCVVVPPGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++++ YPLITYD +F+G + + F+ LTP +VL I++D+IKTYV L +G+
Sbjct: 181 DVPLTLEKLAKYPLITYDFAFTGGTLVSKTFTDAGLTPNVVLTAIDADVIKTYVSLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D+ RD +L I HLF + + + +++ +LR Y+Y FI+L++P NR +
Sbjct: 241 GLLANMAYDAERDTHLAKIDVDHLFADSTTYLGVRKDAFLRGYMYGFIELIAPHFNRAAV 300
Query: 301 NKIL 304
N+ L
Sbjct: 301 NQAL 304
>gi|340788193|ref|YP_004753658.1| LysR family transcriptional regulator [Collimonas fungivorans
Ter331]
gi|340553460|gb|AEK62835.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Collimonas fungivorans Ter331]
Length = 330
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R FNLTE A L+TSQPGVS+ I ELEEEL +DIFIR+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVDIFIRNGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL+ +E ++QE E L++ +E+S +G LT+A THTQARYALP++++ F FP
Sbjct: 61 DPGKGILKIVERLLQEAENLRQASQEYSGETSGTLTVAATHTQARYALPRVVQGFRASFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+++L Q +P+ I + + + +AD+ I TE L+ +LIS PCY+W +V++VP +HPLL
Sbjct: 121 DVRIALQQSSPEHIADWVISGKADVGIATEGLTQFKELISFPCYEWSHVLVVPENHPLLE 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++ ISL +++ YPLITYD+ F+GR +D F +TP IVL ++SD+I+ YV L +G
Sbjct: 181 ISEPISLADLAAYPLITYDIGFTGRGHIDDAFRTAGITPDIVLTAMDSDVIQQYVSLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A + +R LRSI SHL + ++R+ +++G YLRSY Y FI +P+L R+
Sbjct: 241 VGLVASMATEHSRQNGLRSIEVSHLLASNVTRLAVRRGAYLRSYTYDFILQFAPQLKRED 300
Query: 300 INKILN 305
I + L
Sbjct: 301 IVEALQ 306
>gi|372488636|ref|YP_005028201.1| transcriptional regulator [Dechlorosoma suillum PS]
gi|359355189|gb|AEV26360.1| transcriptional regulator [Dechlorosoma suillum PS]
Length = 324
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 214/309 (69%), Gaps = 3/309 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R+ N++EAA+ALYTSQPGVSK I LE+EL I +F R GKR+ G+T
Sbjct: 1 MKLQQLRYLVEVSRRGLNVSEAAEALYTSQPGVSKQIKMLEDELGIIVFERSGKRLTGIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L I++E E LK++G+E++ D+G+L IATTHTQARYALP+++K FT ++P
Sbjct: 61 EPGKAVLEISNRILREAENLKRVGEEYAGGDSGSLVIATTHTQARYALPQVVKRFTERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L+L QG+P QI E N +ADIAI TE L L+++PCYQW + +I P HP+L
Sbjct: 121 RVRLNLHQGSPTQIAEWAANGEADIAIATEALDHVPNLVTMPCYQWSHCVIAPAGHPILE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL ++ +PLITYD +F+G ++ F LTP +VL I++D+IKTYV L +G+
Sbjct: 181 QGPLSLSVLARFPLITYDPAFTGGGRISSAFERHGLTPNVVLSAIDADVIKTYVTLGLGL 240
Query: 241 GIIASIAFDSNRD---KNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GIIA IAFD RD L ++ A HLF + +R+ +++GTYLR Y Y FI+L +P L R
Sbjct: 241 GIIARIAFDPERDGRQNGLVALDAGHLFESNTTRLALRRGTYLRRYEYDFIELFAPHLTR 300
Query: 298 KFINKILNN 306
K + K +
Sbjct: 301 KAVEKSMEG 309
>gi|34499030|ref|NP_903245.1| transcriptional regulator CysB-like protein [Chromobacterium
violaceum ATCC 12472]
gi|34104880|gb|AAQ61237.1| transcriptional regulator CysB [Chromobacterium violaceum ATCC
12472]
Length = 314
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 221/305 (72%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E +Q N++EAA+ L+TSQPG+SK I LE+EL I +FIR+GKR+ ++
Sbjct: 1 MKLQQLRYLVEVAKQGLNVSEAAEKLHTSQPGISKQIRLLEDELGIQVFIRNGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +LR E I++E + LK++G EFS G LTIATTHTQARYALP+ I EF ++P
Sbjct: 61 EPGKEVLRISERILREAQNLKRVGDEFSRESEGALTIATTHTQARYALPQAIAEFVRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSL QG+P QI +M+ + +AD+AI TE ++ +L ++PCY+W ++VP HPL
Sbjct: 121 KVRLSLKQGSPTQICDMVVSGEADLAIATEGIALYKELATLPCYEWNRSLVVPKGHPLAA 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L I+L +I+ YP++TYD +F+GR K+++ F+ Q LTP +VL I++D+IKTYV L +G
Sbjct: 181 LEREITLADIAQYPIVTYDFAFAGRSKINKSFAEQGLTPNVVLTAIDTDVIKTYVSLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
IGIIAS+AF+ RD NL +I A HLF + +++ I++ YLR + Y+FI+L +P L+R+
Sbjct: 241 IGIIASMAFEPERDHNLTAIDAGHLFEPSTTKIGIRKDAYLRGFAYTFIELFAPHLHRRE 300
Query: 300 INKIL 304
++ L
Sbjct: 301 VDSAL 305
>gi|302879190|ref|YP_003847754.1| transcriptional regulator, LysR family [Gallionella
capsiferriformans ES-2]
gi|302581979|gb|ADL55990.1| transcriptional regulator, LysR family [Gallionella
capsiferriformans ES-2]
Length = 313
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 215/304 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ E VR++ +++AA AL+TSQP +SK I LEEEL I+IF+R+GKRI +T
Sbjct: 1 MNLQQLRYLNEIVRRDLKISDAAAALFTSQPAISKQIKLLEEELGIEIFVRNGKRIAAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L + ++ + E K+ +EF + DTG LTIATTHTQARYALP ++K+F ++P
Sbjct: 61 EPGKGLLAIAQRMLLDAENFKQFAQEFHSKDTGQLTIATTHTQARYALPPVVKQFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL L QG P QI E + + +AD+ I TE LS + L+++PCY W + +I P HPLL
Sbjct: 121 KVKLGLHQGTPTQIAEQVLHGEADLCIATESLSSYEGLVTLPCYDWHHCVITPPGHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++LK+I YP+ITYD +FSGR K++ F LTP I L I++D+IKTYVEL +GI
Sbjct: 181 IQTLTLKDIVQYPIITYDHAFSGRSKVNEAFEKAGLTPDIALTAIDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A IAF R+ +LR ++A HLF + +R+ I++ YLR+Y Y FI+L +P L RK I
Sbjct: 241 GILAEIAFIPERELHLRMMNARHLFKPSTTRIAIRKNEYLRAYTYEFIELFAPHLTRKVI 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAM 304
>gi|297538398|ref|YP_003674167.1| LysR family transcriptional regulator [Methylotenera versatilis
301]
gi|297257745|gb|ADI29590.1| transcriptional regulator, LysR family [Methylotenera versatilis
301]
Length = 312
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 212/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E RQ+ N+T AA ALYTSQPGVSK I EEE+ + +F+R+GKR+ G+T
Sbjct: 1 MKLQQLRYLNEVARQDLNITSAADALYTSQPGVSKQIQLFEEEIGLQVFLRNGKRLTGIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL +M +I+ +K++G EFS +TG LTIATTHTQARY LP ++K F +P
Sbjct: 61 EPGEQILSLAAKVMHQIDNIKRVGDEFSNIETGTLTIATTHTQARYKLPAVVKAFMTAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL++ QGNP Q+ E + AD+ I TE +S + L+ +PCY+W ++VP HPLLL
Sbjct: 121 HVKLNIHQGNPSQVAEQVAKGDADVGIATEYISDFENLLCLPCYEWNRCVVVPHGHPLLL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L++++ YPLITYD ++G + + FS ++P +VL I++D+IKTYV L +G+
Sbjct: 181 DGALTLEKLAAYPLITYDFGYTGGSLVSKTFSEAGVSPNVVLTAIDADVIKTYVTLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD NL + SHLF + + + +++ +LR Y+Y FI+L++PK NRK +
Sbjct: 241 GLLANMAYDPERDSNLAMVDVSHLFPNSTTYLGVRKDAFLRGYMYGFIELMAPKFNRKAV 300
Query: 301 NKIL 304
N+ L
Sbjct: 301 NEAL 304
>gi|194289875|ref|YP_002005782.1| CysB family transcriptional regulator [Cupriavidus taiwanensis LMG
19424]
gi|193223710|emb|CAQ69717.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Cupriavidus
taiwanensis LMG 19424]
Length = 314
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 210/306 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G E++ TG LT+ATTHTQARYALP++++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEYAGRHTGRLTVATTHTQARYALPRVVQAFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE L+ L S Y W++V++V DHPL
Sbjct: 121 HVTLALQEASPTHIVELLLTGQADIGIATEALATEAGLTSFEAYSWQHVLVVSPDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++++ + LITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDVAGFQLITYDAGFTGRRKIDSAFAEAGLQPEIVLTALDADVIKTYAELDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D L ISA HLF + V +++G YLR Y ++FI + +P L+R +
Sbjct: 241 GIIASMAYDERKDSGLVRISADHLFAPNTTSVAVRRGAYLRGYAHAFINMFAPHLSRDTV 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 SSALSE 306
>gi|89900896|ref|YP_523367.1| transcriptional regulator CysB-like protein [Rhodoferax
ferrireducens T118]
gi|89345633|gb|ABD69836.1| transcriptional regulator, LysR family [Rhodoferax ferrireducens
T118]
Length = 317
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 230/310 (74%), Gaps = 8/310 (2%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFV+EAVR+N NLTEAAKAL+TSQPGVSKAIIELEEEL I+IF RHGKR++ +T
Sbjct: 1 MNLHQFRFVQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGIEIFARHGKRLKRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ +L+SIE+IM+E+ LK+IG+++SA D+G L+IATTHTQARY LP+ + + +P
Sbjct: 61 EPGQHVLKSIELIMREVSNLKRIGEQYSAEDSGTLSIATTHTQARYVLPEPVAKLRQAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV +SL QG+P Q+ M+ ++ A+I I TE L +L+++PCY+W++V++ P+ HPL L
Sbjct: 121 KVNVSLHQGSPDQVARMLIDEVAEIGIATESLDSYSELVTLPCYEWQHVLVFPVGHPLCL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++I++ PLITY S++GR K+D F+ +KL P I LE I+SD+IKTYV L +GI
Sbjct: 181 KEHLTLEDIAHEPLITYHPSYTGRTKIDHAFATRKLEPRIALEAIDSDVIKTYVRLGLGI 240
Query: 241 GIIAS------IAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPK 294
GI A +A + D +R A LFG ++RV K+G YLR++VY F +LLS +
Sbjct: 241 GIAAEMSVRDVVAEGAQSDLVVR--PAGLLFGQNVARVAFKRGAYLRNFVYKFAELLSDR 298
Query: 295 LNRKFINKIL 304
L+R + + +
Sbjct: 299 LSRDLVARAM 308
>gi|445498838|ref|ZP_21465693.1| transcriptional regulator LysR family [Janthinobacterium sp. HH01]
gi|444788833|gb|ELX10381.1| transcriptional regulator LysR family [Janthinobacterium sp. HH01]
Length = 310
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 213/306 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+ +NLTE A AL+TSQPGVS+ I ELE+EL + IF R+GKR+ G+T
Sbjct: 1 MNFQQLRSIREAARRGYNLTEVANALFTSQPGVSRQIRELEDELGVVIFERNGKRLTGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+ I+ ++ E E L++ E++ +G L++A THTQARYALPK+++ F +P
Sbjct: 61 EPGKGILKIIDRLLIEAENLQQASLEYTGQQSGTLSVAATHTQARYALPKVVQGFRAAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+++L Q P+ I E I + + DI I TE LS L+S PCY+W ++I+VP HPLL
Sbjct: 121 DVRIALQQSAPEHIAEWILSGKTDIGIATEGLSQFPDLVSFPCYRWSHLIVVPDGHPLLT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I L++++ +PLITYD+ F+GR +D F+ + P IVL ++SD+IK YV L +G+
Sbjct: 181 RSPIRLEDLAEFPLITYDVGFTGRGHIDAAFAQAGVKPDIVLTAMDSDVIKQYVSLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AFD RDK +R++ ASHLF +R+ +++G YLRSY Y FI+ +P L+R I
Sbjct: 241 GIVASMAFDHGRDKGMRAVEASHLFAQNTTRLAVRRGAYLRSYAYHFIQQFAPDLSRADI 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 DAALSG 306
>gi|257093558|ref|YP_003167199.1| transcriptional regulator CysB-like protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046082|gb|ACV35270.1| transcriptional regulator, LysR family [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 315
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 216/301 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E RQ N++EAA+ALYTSQPG+SK I LE+EL + +F R GKR+ +T
Sbjct: 1 MKLQQLRYLVEVARQGLNVSEAAEALYTSQPGISKQIKLLEDELGVIVFERSGKRLTAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++++ E ++++G+E++ D+G+L IATTHTQARYALP ++K F + P
Sbjct: 61 EPGKVVLEIAERMLRDAENIRRVGEEYAGGDSGSLVIATTHTQARYALPAVVKNFVDRHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LSL QG+P QI E +ADIAI TE L +L+ +PCYQW + +I P HP+L
Sbjct: 121 KVRLSLHQGHPTQIAEWTLKGEADIAIATEALDQYPQLVMLPCYQWVHCVIAPDGHPILA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+SL ++ +PLITYD +F+GR ++++ F L +LTP +VL I++D+IKTYV L +G+
Sbjct: 181 EKSLSLAALARWPLITYDSAFTGRSRINKAFELAQLTPNVVLTAIDADVIKTYVSLGLGL 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD RD L++++A HLFG+ +R+ +++GT++R Y Y FI+L + L RK +
Sbjct: 241 GIIARMAFDPLRDVGLQAMAAEHLFGSNTTRIGLRRGTHVRRYEYDFIELFASHLTRKAV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|30248858|ref|NP_840928.1| transcriptional regulator CysB-like protein [Nitrosomonas europaea
ATCC 19718]
gi|30138475|emb|CAD84765.1| Bacterial regulatory protein, LysR family [Nitrosomonas europaea
ATCC 19718]
Length = 318
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 220/306 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E +Q NL++AA AL+TSQPG+S+ I LE+EL ++IF RHGKRI G+T
Sbjct: 1 MKLQQLKYLHEIAKQKLNLSKAANALHTSQPGISRQIQLLEQELGVEIFTRHGKRIIGIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG AIL++ + ++Q+ + LKKIG EF+ ++G IATTHTQARY LP +IK F +P
Sbjct: 61 QPGLAILQTAQRMLQDADNLKKIGNEFNDKESGTFIIATTHTQARYVLPPVIKRFIEHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
K++LSL QG+P +I + + +AD+AI TE + DKL+ +PCY+W I+VP HPLL
Sbjct: 121 KIRLSLRQGSPIEIATWVSSGEADLAIATEAIELFDKLVMLPCYEWNRCIVVPPRHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ I+ Y ++TYD +F+GR K+++ F + L P +VL +++D+IKTYVE+ +G+
Sbjct: 181 LKELTLESIAQYAIVTYDFAFTGRSKINQAFESKGLKPNVVLTALDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RDK LR+I A+HLF + +R+ I + +Y+R YVY FI++ + L+ + +
Sbjct: 241 GILAKMAFDPVRDKKLRAIDAAHLFEPSTTRIGICRNSYIRHYVYDFIEMFAAHLDMETV 300
Query: 301 NKILNN 306
NK+L N
Sbjct: 301 NKLLKN 306
>gi|221066159|ref|ZP_03542264.1| transcriptional regulator, LysR family [Comamonas testosteroni
KF-1]
gi|220711182|gb|EED66550.1| transcriptional regulator, LysR family [Comamonas testosteroni
KF-1]
Length = 310
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R+ FNLTE A L+TSQPGVS+ I ELEEEL IDIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETARRGFNLTEVAAMLHTSQPGVSRQIRELEEELGIDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG A+L +E ++ E + L++ G++F A + G L+IA TH+QARYALP+++++F +P
Sbjct: 61 PPGTALLPIVERMLLEADNLRRAGEDFHASERGGLSIAATHSQARYALPQVVRDFRRLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L + L+++PCY+W + ++VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALGSYENLVTLPCYRWSHSVVVPPGHALLD 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ++L++++ +P+ITY+ ++GR +D+ F+ L P +VL +++D+IKTY EL MG
Sbjct: 181 ASGPLTLEDLARHPIITYEQGYTGRAHIDKAFAAAALVPEVVLTAMDADVIKTYAELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIASIAFD+ RD++LR+I A HLF ++R+ +++ +LR Y Y+FI+ P L +
Sbjct: 241 VGIIASIAFDAERDRHLRAIDARHLFEVNLTRLALRRDAWLRGYAYAFIESFVPTLKPEV 300
Query: 300 INKILNN 306
+ L +
Sbjct: 301 VRAALQS 307
>gi|300310987|ref|YP_003775079.1| cys regulon transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|300073772|gb|ADJ63171.1| cys regulon transcription regulator protein [Herbaspirillum
seropedicae SmR1]
Length = 311
Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 210/305 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R FNLTE A L+TSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVEIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL +E ++ E E L++ KE++ +G L+IATTHTQARY LP++++ F FP
Sbjct: 61 EPGKGILGIVERLLLEAENLRRASKEYAGEQSGTLSIATTHTQARYVLPRVVQAFRDAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+++L Q P+ I E + + +ADI I TE LS +L+S PCY W +VI+VP HPLL
Sbjct: 121 QVRIALQQSAPEHIAEWVISGKADIGIATEGLSQFKELVSFPCYTWSHVIVVPKGHPLLG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +SL+++ +PLITYD+ F+GR +D F + P IVL ++SD+I+ YV L MG+
Sbjct: 181 LEQVSLEDLGTWPLITYDVGFTGRGHIDEAFRQAGIEPDIVLTAMDSDVIQQYVSLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A D + + + +I+ASHLF I+R+ +++G YLR Y + FI+ +P+L R I
Sbjct: 241 GLVASMAVDQGKHQEMVAINASHLFKANIARLAVRRGAYLRGYAFDFIQQFAPELKRADI 300
Query: 301 NKILN 305
LN
Sbjct: 301 VNALN 305
>gi|422319265|ref|ZP_16400343.1| LysR family Transcriptional regulator [Achromobacter xylosoxidans
C54]
gi|317406075|gb|EFV86339.1| LysR family Transcriptional regulator [Achromobacter xylosoxidans
C54]
Length = 309
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR++FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRRDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ G L+IA TH+QARYALP +IKEF ++P
Sbjct: 61 PPGEQILPLVEQILQCADNIRHAGAEYADSRKGVLSIAATHSQARYALPPVIKEFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+PKQ++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 EVVLHLHQGSPKQVSEMLLEGEADIGVATEAVADYPGLLNLPCYRWSHSIIVPKGHPLAA 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++ ISL ++S YP+ITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 MDGGISLSQLSRYPIITYGRGYTGRAHIDEAFARAGITPDIVMTAMDADVIKTYVELELG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A++A+D+ RD L +I A HLF ++R+ I++G +LR Y + FI++ P L R
Sbjct: 241 VGIVAAVAWDAERDTRLCAIDARHLFEINLTRLAIRRGAWLRGYAFHFIEMFVPTLTRAV 300
Query: 300 INKILNN 306
+++ L
Sbjct: 301 VDQALKG 307
>gi|329901753|ref|ZP_08272894.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Oxalobacteraceae bacterium IMCC9480]
gi|327549026|gb|EGF33635.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Oxalobacteraceae bacterium IMCC9480]
Length = 332
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 213/306 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R NFNLTE A L+TSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREATRCNFNLTEVANVLFTSQPGVSRQIRELEDELGVEIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E ++ E + L+ +E++ +G LT+ATTHTQARY LP++++ F FP
Sbjct: 61 DPGKGILDIVERLLIEADNLRHASEEYAGKKSGTLTVATTHTQARYVLPRVVQAFRAAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+++L Q +P+ I E + + +AD+ I TE LS D+L+S PCY W + I+VP HPLL
Sbjct: 121 EVRIALQQSSPEHIAEWVLSGKADVGIATEGLSQFDELVSFPCYAWNHAIVVPDGHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L S+SL+E+ YPLITYD+ F+GR +D F + IVL ++SD+I+ YV L MG+
Sbjct: 181 LASVSLQELGGYPLITYDVGFTGRGHIDDAFRQAGIATDIVLTAMDSDVIQQYVALGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A ++++ L++I+ASHLF ++R+ +++G YLR+Y FI +P+L R I
Sbjct: 241 GIVASMAIEASQRNGLKAIAASHLFAPNVTRLAVRRGAYLRTYTRDFILQFAPELTRADI 300
Query: 301 NKILNN 306
++ + +
Sbjct: 301 DEAMKH 306
>gi|299531744|ref|ZP_07045146.1| transcriptional regulator, LysR family protein [Comamonas
testosteroni S44]
gi|298720185|gb|EFI61140.1| transcriptional regulator, LysR family protein [Comamonas
testosteroni S44]
Length = 310
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R+ FNLTE A L+TSQPGVS+ I ELEEEL IDIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETARRGFNLTEVAAMLHTSQPGVSRQIRELEEELGIDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG A+L +E ++ E + L++ G++F A + G L+IA TH+QARYALP+++++F +P
Sbjct: 61 PPGTALLPIVERMLLEADNLRRAGEDFHASERGGLSIAATHSQARYALPQVVRDFRRLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L + L+++PCY+W + ++VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALGSYENLVTLPCYRWSHSVVVPPGHELLD 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ +++L+ ++ +P+ITY+ ++GR +D+ F+ L P +VL +++D+IKTY EL MG
Sbjct: 181 TDGALTLQALARHPIITYEQGYTGRAHIDKAFAATALVPDVVLTAMDADVIKTYAELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIASIAFD+ RD++LR+I A HLF ++R+ +++ +LR Y Y+FI+ P L +
Sbjct: 241 VGIIASIAFDAERDRHLRAIDARHLFEVNLTRLALRRDAWLRGYAYAFIESFVPTLTPEV 300
Query: 300 INKILNN 306
+ L +
Sbjct: 301 VRAALQS 307
>gi|217969231|ref|YP_002354465.1| transcriptional regulator CysB-like protein [Thauera sp. MZ1T]
gi|217506558|gb|ACK53569.1| transcriptional regulator, LysR family [Thauera sp. MZ1T]
Length = 313
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 217/304 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R+V E R+ N++EAA AL+TSQPGVSK I +LE EL I+IF RHGKR+ +T
Sbjct: 1 MNLQQLRYVHEVARRGLNVSEAADALFTSQPGVSKQIRQLESELGIEIFTRHGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E ++++++ L+++G EF+ G L+IATTHTQARY LP +I+ F ++P
Sbjct: 61 EPGRAVLAIAERVLRDLDNLQQVGDEFANEAVGRLSIATTHTQARYVLPDVIRRFMQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL L QGNP+Q+ EM+ + ADIAI TE ++ D+L+ +PCYQW ++ HP+L
Sbjct: 121 QVKLELHQGNPRQVCEMVLDGSADIAIATEAIAEYDELVMLPCYQWNRCVVATPRHPILQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I+ YPLITYD +F+GR ++++ F + L P +VL I+SD+IK YVE+ +GI
Sbjct: 181 AAPLTLEAIARYPLITYDDAFTGRGQINKAFLGRGLKPKVVLTAIDSDVIKKYVEMDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D+ L + A+HLF ++ +R+ +++ +LR+YVY+FI+ +P L+R+ +
Sbjct: 241 GILARMAYDPAEDRRLGMVDAAHLFESSTTRIGLRRRAWLRAYVYAFIEGFAPHLSRRMV 300
Query: 301 NKIL 304
L
Sbjct: 301 ETAL 304
>gi|241662888|ref|YP_002981248.1| CysB family transcriptional regulator [Ralstonia pickettii 12D]
gi|309782187|ref|ZP_07676917.1| cys regulon transcriptional regulator Cbl [Ralstonia sp. 5_7_47FAA]
gi|404377882|ref|ZP_10982982.1| hypothetical protein HMPREF0989_03515 [Ralstonia sp. 5_2_56FAA]
gi|240864915|gb|ACS62576.1| transcriptional regulator, LysR family [Ralstonia pickettii 12D]
gi|308919253|gb|EFP64920.1| cys regulon transcriptional regulator Cbl [Ralstonia sp. 5_7_47FAA]
gi|348613279|gb|EGY62871.1| hypothetical protein HMPREF0989_03515 [Ralstonia sp. 5_2_56FAA]
Length = 319
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 210/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQSFRKEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGIATEAVANEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLEDVAQYPLITYDAGFTGRRNIDAAFASAGLHPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSRETV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|421482062|ref|ZP_15929644.1| LysR family transcriptional regulator [Achromobacter piechaudii
HLE]
gi|400199397|gb|EJO32351.1| LysR family transcriptional regulator [Achromobacter piechaudii
HLE]
Length = 309
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/307 (46%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ+FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRQDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ G L+IA TH+QARYALP +IKEF ++P
Sbjct: 61 PPGELILPLVEQILQCADNIRHAGAEYADSRKGVLSIAATHSQARYALPPVIKEFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPL-L 179
V L L QG+PKQ++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 DVVLHLHQGSPKQVSEMLLEGEADIGVATEAVADYPGLVNLPCYRWSHSIIVPRGHPLER 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ +SL ++S YPLITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 EHDGVSLSQLSRYPLITYGRGYTGRAHIDEAFARAGITPDIVMTAMDADVIKTYVELELG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A++A+D+ RD L +I A HLF ++R+ I++G +LR Y + FI++ P L R+
Sbjct: 241 VGIVAAVAWDAERDTRLTAIDARHLFEINLTRLAIRRGAWLRGYAFHFIEMFVPTLTREV 300
Query: 300 INKILNN 306
+++ L
Sbjct: 301 VDRELKG 307
>gi|17546067|ref|NP_519469.1| CysB family transcriptional regulator [Ralstonia solanacearum
GMI1000]
gi|17428363|emb|CAD15050.1| putative cys regulon transcriptional activator transcription
regulator protein [Ralstonia solanacearum GMI1000]
Length = 327
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVASEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPALEDVAQYPLITYDAGFTGRRNIDAAFAGAGLQPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSREAV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|187928313|ref|YP_001898800.1| transcriptional regulator CysB-like protein [Ralstonia pickettii
12J]
gi|187725203|gb|ACD26368.1| transcriptional regulator, LysR family [Ralstonia pickettii 12J]
Length = 319
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQSFRKEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGIATEAVANEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLEDVAQYPLITYDAGFTGRRNIDAAFGSAGLHPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSRETV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|114331184|ref|YP_747406.1| transcriptional regulator CysB-like protein [Nitrosomonas eutropha
C91]
gi|114308198|gb|ABI59441.1| transcriptional regulator, LysR family [Nitrosomonas eutropha C91]
Length = 309
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 220/306 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++RE +Q NL++AA AL+TSQPGVS+ I LE+EL ++IF RHGKR+ +T
Sbjct: 1 MKLQQLRYLREIAKQKLNLSKAANALHTSQPGVSRQIQLLEQELGVEIFTRHGKRLTSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG AIL + + ++Q+ + LKKIG EF+ ++G IATTHTQARY LP +IK F + P
Sbjct: 61 QPGLAILETAQRMLQDADNLKKIGNEFNDKESGTFVIATTHTQARYVLPPVIKRFIERHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
K++LSL QG+P +I+ + + +AD+AI TE + D+L+ +PCY+W ++VP HPLL
Sbjct: 121 KIRLSLRQGSPIEISTWVSSGEADLAIATEAIELFDELVMLPCYEWNRCVVVPPRHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ I+ Y +ITYD +F+GR K+++ F + L P +VL +++D+IKTYVE+ +G+
Sbjct: 181 LKELTLESIAQYTIITYDFAFTGRSKINQAFESRGLKPNVVLTALDADVIKTYVEIGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD RDK LR+I A+HLF + +R+ I + +Y+R Y+Y FI++ + L+ + I
Sbjct: 241 GILAKMAFDPARDKKLRAIDAAHLFEPSTTRIGICRNSYIRHYIYDFIEMFATHLDTETI 300
Query: 301 NKILNN 306
N++L N
Sbjct: 301 NRLLRN 306
>gi|264679204|ref|YP_003279111.1| LysR family transcriptional regulator [Comamonas testosteroni
CNB-2]
gi|262209717|gb|ACY33815.1| transcriptional regulator, LysR family [Comamonas testosteroni
CNB-2]
Length = 310
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R+ FNLTE A L+TSQPGVS+ I ELEEEL IDIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETARRGFNLTEVAAMLHTSQPGVSRQIRELEEELGIDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG A+L +E ++ E + L++ G++F A + G L+IA TH+QARYALP+++++F +P
Sbjct: 61 PPGTALLPIVERMLLEADNLRRAGEDFHASERGGLSIAATHSQARYALPQVVRDFRRLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q+ EM+ + +ADI + TE L + L+++PCY+W + ++VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALGSYENLVTLPCYRWSHSVVVPPGHELLD 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ +++L+ ++ +P+ITY+ ++GR +D+ F+ L P +VL +++D+IKTY EL MG
Sbjct: 181 TDGALTLQALARHPIITYEQGYTGRAHIDKAFAATGLVPDVVLTAMDADVIKTYAELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIASIAFD+ RD++LR+I A HLF ++R+ +++ +LR Y Y+FI+ P L
Sbjct: 241 VGIIASIAFDAERDRHLRAIDARHLFEVNLTRLALRRDAWLRGYAYAFIESFVPTLTPGV 300
Query: 300 INKILNN 306
+ L +
Sbjct: 301 VRAALQS 307
>gi|312796541|ref|YP_004029463.1| transcriptional regulator cbl [Burkholderia rhizoxinica HKI 454]
gi|312168316|emb|CBW75319.1| Transcriptional regulator cbl [Burkholderia rhizoxinica HKI 454]
Length = 308
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 212/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREAVRQN NLTE A LYTSQ GVSK I +LE+EL +DIFIR GKR+ GLT
Sbjct: 1 MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+ IE ++ + E L+++ ++++ DTG+L +ATTHTQARY+LPK++ F +P
Sbjct: 61 EPGKAVHTLIERMLLDAENLRRVARQYADQDTGHLVVATTHTQARYSLPKVVHRFKEMYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L+L QG+P QI +M+ N ADI I TE L ++++ P Y W + ++V +HPL
Sbjct: 121 KVHLALRQGSPHQIAQMVINGDADIGIATEGLDRYGEIVTFPGYSWHHTVVVRSEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L++I++YP+ITYD F+GR +D+ F + P IVL I++D+IKTYVEL +G+
Sbjct: 181 QPAVTLEDIADYPIITYDQDFTGRSHVDQAFVRAGVAPDIVLTAIDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++A+D RD L ++ HLF + +RV +++G +LR+Y Y I++ +P L +
Sbjct: 241 GIVAAMAYDPKRDSELVALDTQHLFEPSTTRVGLRKGAFLRAYAYRLIEMFAPHLTEAQV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 SGQL 304
>gi|431930341|ref|YP_007243387.1| transcriptional regulator [Thioflavicoccus mobilis 8321]
gi|431828644|gb|AGA89757.1| transcriptional regulator [Thioflavicoccus mobilis 8321]
Length = 313
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 217/304 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R+V+E R+ N++EAA++L+TSQPG+SK I +LE EL I+IF+RHGKR+ +T
Sbjct: 1 MNLQQLRYVQEIARRGLNVSEAAESLHTSQPGISKQIRQLEAELGIEIFVRHGKRLVEVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L ++ +++ L+++G+EFS G L IATTHTQARY LP I+ F +P
Sbjct: 61 EPGRQVLAIAARLLGDLDNLRQVGREFSDKTKGRLAIATTHTQARYTLPTAIQAFIAAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+LSL QGNP QI EM+ +AD+AI TE ++ L+++PCY+W V++ PL HPLL
Sbjct: 121 GVELSLHQGNPSQICEMVLRGEADMAIATEAIADHADLLTLPCYRWNRVVVAPLGHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L++++++P++TYD +F+GR ++D F + L P +VL +SD+IKTYV + +G+
Sbjct: 181 ASRLTLEDLADWPIVTYDAAFAGRSRIDHAFQARGLAPRVVLSAADSDVIKTYVRMGLGL 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D +D +L + A+HLF T+++ + +++ +LRSYVY+FI+ +P L R +
Sbjct: 241 GIVAEMAYDPVQDADLGVLDAAHLFETSVTSIGLRRNAWLRSYVYAFIEGFAPHLTRAVV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 ERTL 304
>gi|83748561|ref|ZP_00945581.1| Transcriptional regulator cbl [Ralstonia solanacearum UW551]
gi|207743301|ref|YP_002259693.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum IPO1609]
gi|386333671|ref|YP_006029841.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum Po82]
gi|421897297|ref|ZP_16327665.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum MolK2]
gi|83724769|gb|EAP71927.1| Transcriptional regulator cbl [Ralstonia solanacearum UW551]
gi|206588503|emb|CAQ35466.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum MolK2]
gi|206594698|emb|CAQ61625.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum IPO1609]
gi|334196120|gb|AEG69305.1| cys regulon transcriptional activator protein [Ralstonia
solanacearum Po82]
Length = 327
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVANEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLEDVAQYPLITYDAGFTGRRNIDAAFAGAGLHPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSREAV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|344198823|ref|YP_004783149.1| LysR family transcriptional regulator [Acidithiobacillus
ferrivorans SS3]
gi|343774267|gb|AEM46823.1| transcriptional regulator, LysR family [Acidithiobacillus
ferrivorans SS3]
Length = 320
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 211/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ VRQ FN++ AA+ALYTSQPGVSK I LE+EL +++F+R GKR+ G+T
Sbjct: 1 MNLQQLRYICAVVRQKFNVSAAAEALYTSQPGVSKQIQLLEDELGVELFVRKGKRMIGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + ++ ++E ++K+G+EFS D G L +ATTHTQARYA+PK +K F ++P
Sbjct: 61 PAGEQIVDFAQRVVNDMESIRKVGQEFSRGDYGRLVVATTHTQARYAMPKAVKIFAERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI EM+ DIAI TE L+ L+++ CYQW ++ P HP+L
Sbjct: 121 GVHLRLRQGSPTQIAEMLATGDVDIAIATEALNSHIGLVALSCYQWNRAVVAPRGHPILE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++LK I+ YP++TYD++F+GR +D+ F+ Q L P +VL I+SD+IK YVEL +GI
Sbjct: 181 KRPLTLKSIAAYPIVTYDIAFAGRSAIDKAFAAQGLKPNVVLSAIDSDVIKAYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D RD L ASHLF + + + ++QG+YLR YVY+FI++ +P L+R +
Sbjct: 241 GIVAQMAYDPARDSTLGVADASHLFEPSTTYLALRQGSYLRRYVYAFIEIFAPHLDRLAV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DMAL 304
>gi|158930000|gb|ABW82981.1| LysR family transcriptional regulator [uncultured bacterium pEAF66]
Length = 308
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 210/305 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE R+ +NLTE A AL+TSQPGVS+ I ELE+EL + IF R+GKR+ G+T
Sbjct: 1 MNFQQLRSIRETARRGYNLTEVANALFTSQPGVSRQIRELEDELGVVIFERNGKRLTGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+ I+ ++ E E L++ +++ ++G LTIA THTQARYALPK+++ F FP
Sbjct: 61 EPGKGILKIIDRLLVEAENLQQASMDYAGQNSGTLTIAATHTQARYALPKVVQSFRHDFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+++L Q P I E + + +ADI I TE LS L+S PCY+W ++I+VP HPLL
Sbjct: 121 DVRIALQQSAPDHIAEWVLSGKADIGIATEGLSQFPDLVSFPCYRWSHLIVVPDGHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I L++++ +PLITYD+ F+GR +D F+ + IVL ++SD+IK YV L +G+
Sbjct: 181 HSPIRLEDLAAFPLITYDVGFTGRGHIDAAFAQAGVKTDIVLTAMDSDVIKQYVSLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AFD RDK LR++ ASHLF ++R+ +++G YLR+Y Y FI +P+L R I
Sbjct: 241 GIVASMAFDHGRDKGLRAVEASHLFAPNVTRLAVRRGAYLRAYAYHFISQFAPELKRADI 300
Query: 301 NKILN 305
+
Sbjct: 301 EAAIG 305
>gi|359796094|ref|ZP_09298701.1| LysR family transcriptional regulator [Achromobacter arsenitoxydans
SY8]
gi|359365952|gb|EHK67642.1| LysR family transcriptional regulator [Achromobacter arsenitoxydans
SY8]
Length = 309
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 214/303 (70%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ+FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRQDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ TG L+IA TH+QARYALP +IKEF ++P
Sbjct: 61 PPGELILPLVEQILQCADNIRHAGAEYADSRTGVLSIAATHSQARYALPPVIKEFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPL-L 179
V L L QG+PKQ++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 DVVLHLHQGSPKQVSEMLLEGEADIGVATEAVADYPGLVNLPCYRWSHSIIVPRGHPLER 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ +SL ++S YP+ITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 QHDGVSLSQLSRYPIITYGRGYTGRAHIDEAFARAGITPDIVMTAMDADVIKTYVELELG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A++A+D+ RD L +I A HLF ++R+ I++G +LR Y + FI++ P L R
Sbjct: 241 VGIVAAVAWDAERDSRLCAIDARHLFEINLTRLAIRRGAWLRGYAFHFIEMFVPTLTRDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VAR 303
>gi|418532879|ref|ZP_13098772.1| LysR family transcriptional regulator [Comamonas testosteroni ATCC
11996]
gi|371449939|gb|EHN62998.1| LysR family transcriptional regulator [Comamonas testosteroni ATCC
11996]
Length = 310
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R FNLTE A L+TSQPGVS+ I ELEEEL IDIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETARCGFNLTEVAAMLHTSQPGVSRQIRELEEELGIDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG A+L +E ++ E + L++ G++F A + G L+IA TH+QARYALP+++++F +P
Sbjct: 61 PPGTALLPIVERMLLEADNLRRAGEDFHASERGGLSIAATHSQARYALPQVVRDFRRLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V L L QG+P+Q+ EM+ + +ADI + TE L + L+++PCY+W + ++VP H LL
Sbjct: 121 QVSLHLHQGSPRQVAEMLLSGEADIGVATEALGSYENLVTLPCYRWSHSVVVPPGHELLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+++L+ ++ +P+ITY+ ++GR +D+ F+ L P +VL +++D+IKTY EL MG
Sbjct: 181 TEGALTLQALARHPIITYEQGYTGRAHIDKAFAATGLVPDVVLTAMDADVIKTYAELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIASIAFD+ RD++LR+I A HLF ++R+ +++ +LR Y Y+FI+ P L +
Sbjct: 241 VGIIASIAFDAERDRHLRAIDARHLFEVNLTRLALRRDAWLRGYAYAFIESFVPTLTPEV 300
Query: 300 INKILNN 306
+ L +
Sbjct: 301 VRAALQS 307
>gi|299067404|emb|CBJ38603.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia
solanacearum CMR15]
Length = 327
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALP++++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPRVVQAFRKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVASEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPALEDVAQYPLITYDAGFTGRRNIDAAFAGAGLQPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSRETV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|409405482|ref|ZP_11253944.1| cys regulon transcription regulator protein [Herbaspirillum sp.
GW103]
gi|386434031|gb|EIJ46856.1| cys regulon transcription regulator protein [Herbaspirillum sp.
GW103]
Length = 311
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 207/305 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R FNLTE A L+TSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVEIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL +E ++ E E L++ KE++ G L+IATTHTQARY LP++++ F FP
Sbjct: 61 EPGKGILGIVERLLLEAENLRRASKEYAGEQNGTLSIATTHTQARYVLPRVVQAFRDAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+++L Q P+ I E + + +ADI I TE LS +L+S PCY W +VI+VP HPLL
Sbjct: 121 QVRIALQQSAPEHIAEWVISGKADIGIATEGLSQFKELVSFPCYTWSHVIVVPQGHPLLG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L ++ +PLITYD+ F+GR +D F + P IVL ++SD+I+ YV L MG+
Sbjct: 181 LEQVTLDDLGTWPLITYDVGFTGRGHIDEAFRQAGIEPDIVLTAMDSDVIQQYVSLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A D + + + +I ASHLF I+R+ +++G YLR Y + FI+ +P+L R I
Sbjct: 241 GLVASMAVDQGKHQEMVAIHASHLFKANIARLAVRRGAYLRGYAFDFIQQFAPELKRADI 300
Query: 301 NKILN 305
LN
Sbjct: 301 VNALN 305
>gi|119896725|ref|YP_931938.1| transcriptional regulator CysB-like protein [Azoarcus sp. BH72]
gi|119669138|emb|CAL93051.1| transcriptional regulator CysB [Azoarcus sp. BH72]
Length = 313
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 217/304 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R+++E R+ N+++AA ALYTSQPGVSK I LE EL I+IF RHGKR+ +T
Sbjct: 1 MNLQQLRYIQEVARRGLNVSDAADALYTSQPGVSKQIRLLEAELGIEIFARHGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E ++++++ L ++G EFS G L+IATTHTQARYALP +++EF ++P
Sbjct: 61 EPGRAVLAIAERMLRDMDNLLQVGDEFSNEAAGGLSIATTHTQARYALPPVVREFMRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKLSL QG+P Q+ EM+ + ADIAI TE ++ D+L+ +PC+QW ++ HP+L
Sbjct: 121 QVKLSLHQGSPHQVCEMVLDGSADIAIATEAIAEYDELVMLPCHQWNRCVVASPRHPILR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I+ YPLITYD +F+GR ++++ F + L P +VL ++SD+IKTYV + +GI
Sbjct: 181 EQPLTLEAIARYPLITYDDAFTGRSQINKAFLGRGLKPNVVLTALDSDVIKTYVAMDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D+ L I A+HLF ++ +R+ +++ +LR YVY+F++L +P L R+ +
Sbjct: 241 GILARMAYDPEEDRKLGMIDAAHLFESSTTRIGLRRRAWLRGYVYAFVELFAPHLTRRMV 300
Query: 301 NKIL 304
L
Sbjct: 301 ETAL 304
>gi|311106210|ref|YP_003979063.1| transcriptional regulator [Achromobacter xylosoxidans A8]
gi|310760899|gb|ADP16348.1| HTH-type transcriptional regulator cbl [Achromobacter xylosoxidans
A8]
Length = 309
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ+FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRQDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ TG L+IA TH+QARYALP ++KEF ++P
Sbjct: 61 PPGELILPLVEQILQCADNIRHAGAEYADSRTGVLSIAATHSQARYALPPVVKEFRERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPL-L 179
+V L L QG+PKQ++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 EVVLHLHQGSPKQVSEMLLEGEADIGVATEAVADYPGLVNLPCYRWSHSIIVPRGHPLER 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ++L ++S +P+ITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 QQDGVTLSQLSRHPIITYGRGYTGRAHIDEAFARAGITPDIVMTAMDADVIKTYVELGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+A+D+ RD L +I A HLF ++R+ I++G +LR Y + F+++ P L R+
Sbjct: 241 LGIVASVAWDAERDTRLCAIDARHLFEINLTRLAIRRGAWLRGYAFHFVEMFVPTLTREI 300
Query: 300 INKILNN 306
+ + L
Sbjct: 301 VERALKG 307
>gi|358639262|dbj|BAL26559.1| transcriptional regulator CysB-like protein [Azoarcus sp. KH32C]
Length = 313
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 216/301 (71%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ E R+ N++EAA AL+TSQPGVSK I + E EL ++IF+RHGKR+ +T
Sbjct: 1 MNLQQLRYIHEVARRGLNVSEAADALFTSQPGVSKQIRQFEAELGVEIFVRHGKRLVDVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++++ + L+++G EF+ G L+IATTHTQARYALP I+++F +FP
Sbjct: 61 EPGKQVLAIAERMLRDADNLRQVGAEFTNEVAGRLSIATTHTQARYALPAIMRDFMQRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL L QGNP+Q+ +M+ +AD+AI TE ++ D+L+ +PCYQW I+ HP+L
Sbjct: 121 QVKLELHQGNPRQVCDMVLAGEADLAIATEAIAEYDELVMLPCYQWNRCIVATPRHPILK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ YP+ITYD +F+GR +++ F + L P +VL ++SD+IKTYV + +GI
Sbjct: 181 EHPLTLEAIARYPIITYDDAFTGRSLINKAFLGRGLRPKVVLTALDSDVIKTYVAMDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ D+ L ASHLF ++ +R+ +++ YLR YVY+F++L +P L R+ +
Sbjct: 241 GIVARMAFDAAADRGLGMADASHLFESSTTRIGLRRNAYLRGYVYAFVELFAPHLTRRMV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|293605316|ref|ZP_06687701.1| Cys regulon transcriptional regulator Cbl [Achromobacter piechaudii
ATCC 43553]
gi|292816255|gb|EFF75351.1| Cys regulon transcriptional regulator Cbl [Achromobacter piechaudii
ATCC 43553]
Length = 310
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ+FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRQDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ G L+IA TH+QARYALP +IKEF ++P
Sbjct: 61 PPGKLILPLVEQILQCADNIRHAGAEYADSRQGVLSIAATHSQARYALPPVIKEFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG+P+Q++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 DVVLHMHQGSPRQVSEMLLEGEADIGVATEAVADYPGLLNLPCYRWSHSIIVPRGHPLQS 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ISL ++S YP+ITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 QHDGISLSQLSRYPIITYGQGYTGRAHIDEAFARAGITPNIVMTAMDADVIKTYVELELG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A++A+D+ RD L +I A HLF ++R+ I++G +LR Y Y FI++ P L R
Sbjct: 241 VGIVAAVAWDAERDTRLGAIDARHLFEINLTRLAIRRGAWLRGYAYDFIEMFVPTLTRAV 300
Query: 300 INKILNN 306
+ + L
Sbjct: 301 VERELKG 307
>gi|300691664|ref|YP_003752659.1| cysteine biosynthesis and aliphatic sulfonates utilization LysR
family transcriptional regulator [Ralstonia solanacearum
PSI07]
gi|299078724|emb|CBJ51383.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia
solanacearum PSI07]
gi|344169968|emb|CCA82342.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [blood disease
bacterium R229]
gi|344171518|emb|CCA84133.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia syzygii
R24]
Length = 319
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 208/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKSYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V DHPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVANEPGLTSFEAYRWRHVLVVSPDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLEDVAQYPLITYDAGFTGRRNIDAAFTGAGLYPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSRDAV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|300704281|ref|YP_003745884.1| LysR family transcriptional regulator [Ralstonia solanacearum
CFBP2957]
gi|299071945|emb|CBJ43274.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia
solanacearum CFBP2957]
Length = 327
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V +HPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVANEPGLTSFEAYRWRHVLVVSPEHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLEDVAQYPLITYDAGFTGRRNIDAAFAGAGLHPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSREAV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|224825233|ref|ZP_03698339.1| transcriptional regulator, LysR family [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602904|gb|EEG09081.1| transcriptional regulator, LysR family [Pseudogulbenkiania
ferrooxidans 2002]
Length = 311
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 210/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTE A AL+TSQ GVSK I +LE+EL +++F+R GKR GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEVANALFTSQSGVSKHIKDLEDELGVELFVRKGKRFLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E ++ + +K++ ++FS D G LTIATTHTQARYALPK++ F FP
Sbjct: 61 DPGKELLTIVERMLLDAGNVKRLAEQFSQRDQGQLTIATTHTQARYALPKVVTAFKQAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L LLQ +P ++ ++ + QADI I TE +S +L+S P Y+W + +I P HPL
Sbjct: 121 KVHLVLLQASPDELVRLLLDGQADIGIATEAISAVPELVSFPYYRWHHTVIAPPGHPLHG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ +++YPL+TY F+GR ++DR F+ L P +V+ +++D+IKTYVEL MG+
Sbjct: 181 VKPLTLEALADYPLVTYHEGFTGRAQIDRAFAEAGLVPDVVMAALDADVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A D+ RD+ + + + LFG SR+ +++G YLRSY Y FI+L S +L+ +
Sbjct: 241 GIVASMAVDAQRDQGVAEVDSVPLFGHQTSRIAVRRGHYLRSYAYRFIELCSAELDETTV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 CQAL 304
>gi|319943466|ref|ZP_08017748.1| Cys regulon transcriptional activator CysB [Lautropia mirabilis
ATCC 51599]
gi|319743281|gb|EFV95686.1| Cys regulon transcriptional activator CysB [Lautropia mirabilis
ATCC 51599]
Length = 314
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/302 (47%), Positives = 212/302 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R VREAVR+ FNLTE A+AL+TSQPGVS+ I ELE+EL ++F+R GKR+ LT
Sbjct: 1 MNLQQLRSVREAVRRGFNLTEVARALHTSQPGVSRQIRELEQELGFELFVRAGKRLTSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G + IE I+ E L ++G+E+S G L+I+ TH+QARYALP + +F ++P
Sbjct: 61 HAGSVAVPIIEGILGGAENLLRVGEEYSQQSAGKLSISATHSQARYALPDAVHDFRRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L+L QG+P+Q+ EM+ + +ADI I TE L+ D L+++ CY+W + +IVP +HPLL
Sbjct: 121 DVQLNLHQGSPQQVAEMLLSGEADIGIATEALTDYDGLVTLSCYRWTHSVIVPPNHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ +P+ITY F+GR+ +D F ++ L P +VL +++D+IKTYVEL +GI
Sbjct: 181 DPELTLERVATFPVITYSPGFTGRLHIDEAFRVRGLEPNMVLTAMDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIASIAFD RD LR+I A HLF ++R+ ++G +LRSYVY FI+ + L R+ +
Sbjct: 241 GIIASIAFDEERDTRLRAIDAGHLFPVNVTRLAFRRGAFLRSYVYDFIETFASPLTREVV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|113868212|ref|YP_726701.1| transcriptional regulator CysB-like protein [Ralstonia eutropha
H16]
gi|113526988|emb|CAJ93333.1| transcriptional regulator, LysR-family [Ralstonia eutropha H16]
Length = 314
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 208/306 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G E++ TG LT+ATTHTQARYALP++++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEYAGRHTGRLTVATTHTQARYALPRVVQAFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE L+ L S Y W++V++V HPL
Sbjct: 121 HVTLALQEASPTHIVELLLTGQADIGIATEALATEAGLTSFEAYSWQHVLVVSPGHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++++ + LITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDVAGFQLITYDAGFTGRRKIDSAFAEAGLQPEIVLTALDADVIKTYAELDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D L ISA HLF + V +++G YLR Y ++FI + +P L+ +
Sbjct: 241 GIIASMAYDERKDSGLVRISADHLFAPNTTSVAVRRGAYLRGYAHAFINMFAPHLSPDTV 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 SSALSE 306
>gi|423017938|ref|ZP_17008659.1| LysR family transcriptional regulator [Achromobacter xylosoxidans
AXX-A]
gi|338779045|gb|EGP43503.1| LysR family transcriptional regulator [Achromobacter xylosoxidans
AXX-A]
Length = 309
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR++FNLT+ +++L+TSQPGVS+ I ELEEE+ +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRRDFNLTDVSESLHTSQPGVSRQIRELEEEVGVDIFVRSGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL +E I+Q + ++ G E++ G L+IA TH+QARYALP +IKEF ++P
Sbjct: 61 PPGEQILPLVEQILQCADNIRHAGAEYADSRKGVLSIAATHSQARYALPPVIKEFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+Q++EM+ +ADI + TE ++ L+++PCY+W + IIVP HPL
Sbjct: 121 EVVLHLHQGSPRQVSEMLLEGEADIGVATEAVADYPGLLNLPCYRWSHSIIVPKGHPLAA 180
Query: 181 L-NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ISL ++S YP+ITY ++GR +D F+ +TP IV+ +++D+IKTYVEL +G
Sbjct: 181 VEGGISLSQLSRYPIITYGRGYTGRAHIDEAFARAGITPDIVMTAMDADVIKTYVELELG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A++A+D+ RD L +I A HLF ++R+ I++G +LR Y + FI++ P L R
Sbjct: 241 VGIVAAVAWDAERDTRLCAIDARHLFEINLTRLAIRRGAWLRGYAFHFIEMFVPTLTRAV 300
Query: 300 INKILNN 306
+++ L
Sbjct: 301 VDQALKG 307
>gi|395763662|ref|ZP_10444331.1| transcriptional regulator Cbl [Janthinobacterium lividum PAMC
25724]
Length = 310
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 211/306 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+ +NLTE A AL+TSQPGVS+ I ELE+EL + IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARRGYNLTEVANALFTSQPGVSRQIRELEDELGVVIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+ ++ ++ E E L++ E+S +G L++A THTQARYALPK+++ F +P
Sbjct: 61 EPGKGILKIVDRLLIEAENLQQASLEYSGQTSGTLSVAATHTQARYALPKVVQGFRAAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+++L Q P+ I E + + + DI I TE LS L+S PCY+W ++I+VP HPLL
Sbjct: 121 EVRIALQQSAPEHIAEWVLSGKTDIGIATEGLSQFPDLVSFPCYRWSHLIVVPDGHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I L++++ YPLITYD F+GR +D F+ + I+L ++SD+IK YV L +G+
Sbjct: 181 HAPIGLEDLAKYPLITYDKGFTGRGHIDDAFAKAGVATDIILTAMDSDVIKQYVALGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AFD RDK L+++ ASHLF +R+ +++G YLR+Y Y FI L+P L R+ I
Sbjct: 241 GIVASMAFDHGRDKGLQAVEASHLFAINTTRLAVRRGAYLRAYAYEFILQLAPDLTREDI 300
Query: 301 NKILNN 306
++ +
Sbjct: 301 DRAMAG 306
>gi|347539402|ref|YP_004846827.1| LysR family transcriptional regulator [Pseudogulbenkiania sp. NH8B]
gi|345642580|dbj|BAK76413.1| transcriptional regulator, LysR family [Pseudogulbenkiania sp.
NH8B]
Length = 310
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTE A AL+TSQ GVSK I +LE+EL +++F+R GKR GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEVANALFTSQSGVSKHIKDLEDELGVELFVRKGKRFLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E ++ + +K++ ++FS D G LTIATTHTQARYALPK++ F FP
Sbjct: 61 DPGKELLTIVERMLLDAGNVKRLAEQFSQRDQGQLTIATTHTQARYALPKVVTAFKQAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L LLQ +P ++ ++ + QADI I TE +S +L+S P Y W + +I P HPL
Sbjct: 121 KVHLVLLQASPDELVRLLLDGQADIGIATEAISAVPELVSFPYYSWHHTVIAPPGHPLHG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ +++YPL+TY F+GR ++DR F+ L P +V+ +++D+IKTYVEL MG+
Sbjct: 181 VKPLTLEALADYPLVTYHEGFTGRAQIDRAFAEAGLLPDVVMAALDADVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A D+ RD+ + + + LFG SR+ +++G YLRSY Y FI+L S +L+ +
Sbjct: 241 GIVASMAVDAQRDQGVAEVDSVPLFGHQTSRIAVRRGHYLRSYAYRFIELCSAELDETTV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 RQAL 304
>gi|421888371|ref|ZP_16319469.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia
solanacearum K60-1]
gi|378966320|emb|CCF96217.1| transcriptional regulator of cysteine biosynthesis and aliphatic
sulfonates utilization; LysR family [Ralstonia
solanacearum K60-1]
Length = 327
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 209/304 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELE+EL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G+EFS +G LT+ATTHTQARYALPK+++ F +P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGEEFSGRRSGRLTVATTHTQARYALPKVVQAFRKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI + TE ++ L S Y+W +V++V +HPL
Sbjct: 121 HVTLALQEASPSHIVELLLTGQADIGVATEAVANEPGLTSFEAYRWRHVLVVSPEHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+L++++ YPLITYD F+GR +D F+ L P IVL +++D+IKTYV L +G+
Sbjct: 181 NPLPTLQDVAQYPLITYDAGFTGRRNIDAAFAGAGLHPEIVLTAMDADVIKTYVALDVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D NL I A HLF +RV +++G YLR Y + FI + +P L+R+ +
Sbjct: 241 GIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSRETV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 AEAV 304
>gi|339326264|ref|YP_004685957.1| LysR family transcriptional regulator [Cupriavidus necator N-1]
gi|338166421|gb|AEI77476.1| transcriptional regulator LysR family [Cupriavidus necator N-1]
Length = 314
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 207/306 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+ FNLTE A ALYTSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEEELGVEIFERYGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ I+R +E ++ E E L++ G E++ TG LT+ATTHTQARYALP++++ F ++P
Sbjct: 61 EPGREIVRIVERLLLEAENLRQAGDEYAGRHTGRLTVATTHTQARYALPRVVQAFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+L + +P I E++ QADI I TE L+ L S Y W +V++V HPL
Sbjct: 121 HVTLALQEASPTHIVELLLTGQADIGIATEALATEAGLTSFEAYSWRHVLVVSPGHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +L++++ + LITYD F+GR K+D F+ L P IVL +++D+IKTY EL +G+
Sbjct: 181 LPEPTLEDVAGFQLITYDAGFTGRRKIDSAFAEAGLQPEIVLTALDADVIKTYAELDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D +D L ISA HLF + V +++G YLR Y ++FI + +P L+ +
Sbjct: 241 GIIASMAYDERKDSGLVRISADHLFAPNTTSVAVRRGAYLRGYAHAFINMFAPHLSPDTV 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 SSALSE 306
>gi|262373093|ref|ZP_06066372.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
junii SH205]
gi|262313118|gb|EEY94203.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
junii SH205]
Length = 307
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L++ISL ++ YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDNISLDLLAEYPLITYHGGFTGRSKIDKAFEDAHLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I +H+FGT + + +++G LR Y Y FI L SPK + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-THIFGTNTTWIAVRKGHLLRGYGYEFISLCSPKTDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|77165755|ref|YP_344280.1| transcriptional regulator CysB-like protein [Nitrosococcus oceani
ATCC 19707]
gi|254433358|ref|ZP_05046866.1| LysR substrate binding domain protein [Nitrosococcus oceani AFC27]
gi|76884069|gb|ABA58750.1| transcriptional regulator, LysR family [Nitrosococcus oceani ATCC
19707]
gi|207089691|gb|EDZ66962.1| LysR substrate binding domain protein [Nitrosococcus oceani AFC27]
Length = 306
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 211/305 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q FV E RQ +N++ AA+AL+ +QPGVS I +LE EL + IF RHGKR+ G+T
Sbjct: 1 MKLQQLHFVYEVSRQGYNVSAAAEALHATQPGVSNRIHQLERELGVPIFERHGKRLTGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL+ IE I++E+E +K++ E + G L+IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGKAILKMIERILREVENIKQVSAEATDEHQGILSIATTHTQARYALPLVIKAFRDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L + QG P+QI EM D+AI TE + + LI +PCY+W ++VP HPLL
Sbjct: 121 QVRLRMFQGTPRQIAEMAAAGTVDLAIATEAIELFEDLIMLPCYEWNRSVVVPPAHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP+ITY F+GR KLD F+ + L P ++L ++D+IKTY+ L +GI
Sbjct: 181 CRPLTLEAVAKYPIITYVFGFTGRSKLDNAFASKNLVPNVILTATDADVIKTYLHLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD ++D L++I ASHLF + + + I++G YLR Y+Y+FI+L SP+L R+ +
Sbjct: 241 GIIASMAFDPDQDAPLKAIDASHLFEPSTTHLGIRRGAYLRGYIYAFIELFSPQLTRQIV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DAAVH 305
>gi|398811629|ref|ZP_10570421.1| transcriptional regulator [Variovorax sp. CF313]
gi|398080081|gb|EJL70908.1| transcriptional regulator [Variovorax sp. CF313]
Length = 314
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLTE A L+TSQPGVS+ I ELEEEL I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L IE ++ E LK G+EF A +G L++A TH+QARYA+P ++EF +QFP
Sbjct: 61 EPGGHVLPIIERMLMESSNLKHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRMQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+PKQI +M+ + +AD+ I TE L +L+++PCY+W + ++VP HP LL
Sbjct: 121 NVKLHLHQGSPKQIAQMLLDGEADVGIATEALGDYPQLVALPCYRWTHSVVVPPGHP-LL 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ YPLITYD F+GR ++D F + L P IVL +++D+IKTYV+L +G+
Sbjct: 180 DAPLTLDALTRYPLITYDTGFTGRSRIDEAFGQRGLQPNIVLAAMDADVIKTYVQLGLGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+++ RD LR++ A LFG ++++ +++GTYLR YV++FI+ +P L R +
Sbjct: 240 GIVAGVAYEAERDTQLRALDAGRLFGINLTKLAVRRGTYLRKYVHAFIESFAPTLTRAVV 299
Query: 301 NKILNN 306
K L +
Sbjct: 300 EKALGD 305
>gi|134094079|ref|YP_001099154.1| transcriptional regulator Cbl [Herminiimonas arsenicoxydans]
gi|133737982|emb|CAL61027.1| HTH-type transcriptional regulator CysB-like [Herminiimonas
arsenicoxydans]
Length = 308
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/304 (46%), Positives = 204/304 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE R FNLTE A L+TSQPGVS+ I ELEEEL +DIF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIRETARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVDIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL I+ ++ E E L++ +E++ + G L +ATTHTQARY LP++++ F +FP
Sbjct: 61 DPGRGILTIIDRLLLEAENLQRASQEYAGQEIGTLAVATTHTQARYMLPEVVQAFRAEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+++L Q +P+ I E + + +ADI I TE LS + L+S PCY+W + I+VP H LL
Sbjct: 121 KVRIALQQSSPEHIAEWVLSGKADIGIATEGLSQFEDLVSFPCYRWHHAIVVPQGHALLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YPLITYDL F+GR +D F + P IVL ++SD+I+ YV L +G+
Sbjct: 181 HAPVTLEALAKYPLITYDLGFTGRGHIDDAFKSADIAPDIVLTAMDSDVIQQYVSLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A N L I SHLF ++R+ +++G YLR Y YSFI+ +P+L R I
Sbjct: 241 GIVASMAVQHNGSHGLAVIDGSHLFAQNVTRLAVRRGAYLRQYTYSFIQQFAPELTRADI 300
Query: 301 NKIL 304
++ L
Sbjct: 301 DRAL 304
>gi|120611702|ref|YP_971380.1| LysR family transcriptional regulator [Acidovorax citrulli AAC00-1]
gi|120590166|gb|ABM33606.1| transcriptional regulator, LysR family [Acidovorax citrulli
AAC00-1]
Length = 309
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 218/306 (71%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLT+ A+ L+TSQPGVS+ I ELEEEL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRTGFNLTDVARILHTSQPGVSRQIRELEEELGLEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG +L +E +M E E L++ G +F A G L+IA TH+QARYALP+++++F FP
Sbjct: 61 PPGSTLLPIVERLMLEAENLRRAGHDFRASGEGRLSIAATHSQARYALPQVVRDFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V L L QG+P+Q+ EM+ + +ADI + TE L+ +L+++PCY+W + I+VP HPLL
Sbjct: 121 QVTLHLHQGSPRQVAEMLLSGEADIGVATEALAGYGELVTLPCYRWSHSIVVPPGHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L +L++++ +P+ITY+L ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 181 LPEPPTLRQLARFPIITYELGYTGRAHIDEAFAREGLQPDVVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D RD++LR I A HLF ++R+ +++G++LR Y Y FI+ P L R+
Sbjct: 241 VGIVASIALDPERDRHLRMIDARHLFEVNLTRLGLRRGSWLRGYAYRFIEAFVPTLTREA 300
Query: 300 INKILN 305
+++ L
Sbjct: 301 VDEALR 306
>gi|300114704|ref|YP_003761279.1| lysR family transcriptional regulator [Nitrosococcus watsonii
C-113]
gi|299540641|gb|ADJ28958.1| transcriptional regulator, LysR family [Nitrosococcus watsonii
C-113]
Length = 310
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 211/305 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q FV E RQ +N++ AA+AL+ +QPGVS I +LE+EL + IF RHGKR+ G+T
Sbjct: 5 MKLQQLYFVYEVSRQGYNVSAAAEALHATQPGVSNRIHQLEQELGVPIFERHGKRLTGMT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G AIL+ IE I++E+E +K++ E + G L+IATTHTQARY LP +IK F ++P
Sbjct: 65 PAGSAILKMIERILREVENIKQVSAEATDEHQGILSIATTHTQARYVLPPVIKAFRDRYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L + QG P+QI EM D+AI TE + + LI +PCY+W ++VP HPLL
Sbjct: 125 QVRLRMFQGTPRQIAEMAAAGTVDLAIATEAIELFEDLIMLPCYEWNRSVVVPPTHPLLA 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD F+ + L P ++L ++D+IKTY+ L +GI
Sbjct: 185 CQPLTLEAVAEYPIVTYVFGFTGRSKLDNAFTSKNLVPNVILTATDADVIKTYLHLGLGI 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD ++D L++I+ASHLF + + + I++G YLR Y+Y+FI+L SP+L R+ +
Sbjct: 245 GIIASMAFDPDQDAPLKAINASHLFEPSTTHLGIRRGAYLRGYIYAFIELFSPRLTRQIV 304
Query: 301 NKILN 305
+ ++
Sbjct: 305 DAAVH 309
>gi|121602989|ref|YP_980318.1| LysR family transcriptional regulator [Polaromonas
naphthalenivorans CJ2]
gi|120591958|gb|ABM35397.1| transcriptional regulator, LysR family [Polaromonas
naphthalenivorans CJ2]
Length = 314
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 218/306 (71%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR FNLT+ A AL+TSQPGVS+ I ELEEE+ I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRCGFNLTDVATALHTSQPGVSRQIRELEEEIGIELFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L +E ++ E LKK G+E+ A G L+IA TH+QARYALP ++EF QFP
Sbjct: 61 EPGAHVLPIVERLLLECSNLKKAGQEYMAQQNGLLSIAATHSQARYALPPAVQEFRAQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+PKQ+ EM+ + + D+ I TE L+ +L+++PCY+W + +IVP H LL
Sbjct: 121 HVKLHLHQGSPKQVAEMLLSGEVDVGIATEALNGYPELVALPCYRWTHSVIVPPGHA-LL 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ + LITYD F+GR +D+ F+ +L P IVL +++D+IKTYVEL MG+
Sbjct: 180 SGPLTLERLAQFALITYDNGFTGRTHIDQAFAQHQLMPNIVLTAMDADVIKTYVELGMGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ASIA+++ RD LR++ A LFG ++++ +++G+YLRSYVY+FI+ +P LNR +
Sbjct: 240 GIVASIAYEAERDTALRALDAGALFGINLTKLAVRRGSYLRSYVYAFIESFAPTLNRAIV 299
Query: 301 NKILNN 306
+ L+
Sbjct: 300 EQTLSG 305
>gi|398806331|ref|ZP_10565239.1| transcriptional regulator [Polaromonas sp. CF318]
gi|398088248|gb|EJL78814.1| transcriptional regulator [Polaromonas sp. CF318]
Length = 314
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 218/305 (71%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR NFNLT+ A AL+TSQPGVS+ I ELEEEL I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRSMREAVRCNFNLTDVANALHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG +L IE ++ E LKK G+EF A +G L+IA TH+QARYALP ++EF QFP
Sbjct: 61 APGAHVLPIIERLLLESSNLKKAGQEFMAQQSGLLSIAATHSQARYALPHAVQEFRSQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+PKQ+ +M+ + + D+ I TE L+ +L+++PCY+W + +IVP HP LL
Sbjct: 121 NVKLHLHQGSPKQVADMLVSGEVDVGIATEALNDYPELVALPCYRWTHSVIVPPGHP-LL 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ + LITYD F+GR +D F+ + L P IVL +++D+IKTYVEL MG+
Sbjct: 180 DGPLTLEGLARFALITYDTGFTGRSHIDGAFTQRGLAPNIVLTAMDADVIKTYVELGMGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ASIA+++ RD LR++ A LFG ++++ +++G YLR YVY+FI+ +P L+R +
Sbjct: 240 GIVASIAYEAERDTALRALDAGALFGINLTKLAVRRGGYLRGYVYAFIESFAPTLSRAVV 299
Query: 301 NKILN 305
K L+
Sbjct: 300 EKTLS 304
>gi|319790760|ref|YP_004152400.1| LysR family transcriptional regulator [Variovorax paradoxus EPS]
gi|315593223|gb|ADU34289.1| transcriptional regulator, LysR family [Variovorax paradoxus EPS]
Length = 314
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 214/306 (69%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLTE A L+TSQPGVS+ I ELEEEL I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L IE ++ E L+ G+EF A +G L+IA TH+QARYA+P ++EF QFP
Sbjct: 61 EPGGHVLPIIERMLLESSNLRHAGQEFVAQQSGLLSIAATHSQARYAMPVAVQEFRAQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+PKQI +M+ + +AD+ I TE L +L+++PCY+W + +IVP HP LL
Sbjct: 121 NVKLHLHQGSPKQIAQMLIDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHP-LL 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL+ ++ YPLITYD F+GR ++D F + L P IVL +++D+IKTYV L +G+
Sbjct: 180 DAPLSLEALTRYPLITYDTGFTGRSRIDEAFEARGLQPNIVLAAMDADVIKTYVTLGLGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+++ RD LR+I A LFG ++++ +++G YLR YVY+FI+ +P L R +
Sbjct: 240 GIVAGVAYEAERDTQLRAIDAGRLFGINLTKLAVRRGNYLRKYVYAFIESFAPTLTRAIV 299
Query: 301 NKILNN 306
K L +
Sbjct: 300 EKALGD 305
>gi|339484727|ref|YP_004696513.1| LysR family transcriptional regulator [Nitrosomonas sp. Is79A3]
gi|338806872|gb|AEJ03114.1| transcriptional regulator, LysR family [Nitrosomonas sp. Is79A3]
Length = 332
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 154/306 (50%), Positives = 221/306 (72%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E Q+ NL++AAK L+TSQP +SK I LE+EL +DIF+R+GKRI +T
Sbjct: 1 MKLQQLRYLCETASQDMNLSKAAKKLHTSQPAISKQIQMLEDELGVDIFLRNGKRIVQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PGQ I+++ ++++ + L+KI +EF+ G LTIATTHTQARYALP +IK FT ++P
Sbjct: 61 PPGQLIIKTATRMLRDADNLRKIAEEFTNEAGGTLTIATTHTQARYALPPVIKRFTERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL L QG+P QI+ ++ + +ADIAI TE +LI +PCYQW ++VP HPLL
Sbjct: 121 KVKLILRQGSPMQISALVTSGEADIAIATEAFEQFPELILLPCYQWNRCVVVPPKHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +SL+ I+ YP+ITYD +F+GR K+++ F+ + L P +VL I+SD+IKTYVEL +G+
Sbjct: 181 LKKLSLEAINQYPIITYDFAFTGRSKINQAFASRGLEPNVVLTAIDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++AFDS RDKNLRSI ASHLF + +R+ I + +Y+R YV+ FI++ +P L+ I
Sbjct: 241 GILANMAFDSKRDKNLRSIDASHLFEPSTTRIGISRNSYIRGYVFDFIEMFAPHLDHANI 300
Query: 301 NKILNN 306
L +
Sbjct: 301 QAKLES 306
>gi|383760463|ref|YP_005439449.1| LysR family transcriptional regulator [Rubrivivax gelatinosus
IL144]
gi|381381133|dbj|BAL97950.1| transcriptional regulator, LysR family [Rubrivivax gelatinosus
IL144]
Length = 318
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 210/308 (68%), Gaps = 4/308 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR+ FNLTE A+ L+TSQPGVS+ I ELE EL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRRGFNLTEVAQVLHTSQPGVSRQIRELETELGVEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG IL +E ++QE + LK+ G +++ G L IA TH+QARYALP +++F P
Sbjct: 61 APGATILPIVERLLQEADNLKRAGDDYAGQGKGTLVIAATHSQARYALPTAVRDFRATHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V+L L QG+PKQ+ E++ +AD+ + T +++ +L+++PCY+W + +IVP H L
Sbjct: 121 NVQLRLHQGSPKQVAELLLEGEADLGVATALIAHYPELVALPCYRWTHSVIVPAGHELAR 180
Query: 180 ---LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++L+ ++ +PLITY+ ++GR ++D FS + L +VL +++D+IKTYVEL
Sbjct: 181 DAERGAPLTLERLAAFPLITYEPGYTGRSQIDEAFSQKGLALELVLSAMDADVIKTYVEL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
MG+GIIAS+A+D RD LR+I A HLF T ++ V +++G YLR YVY FI+ + L+
Sbjct: 241 GMGVGIIASMAYDEQRDPGLRAIDARHLFATNMTHVGLRRGAYLRDYVYDFIRTFAAPLD 300
Query: 297 RKFINKIL 304
R+ +++ L
Sbjct: 301 RELVDRAL 308
>gi|260551481|ref|ZP_05825665.1| transcriptional regulator cysteine biosynthesis protein
[Acinetobacter sp. RUH2624]
gi|424054672|ref|ZP_17792196.1| hypothetical protein W9I_03094 [Acinetobacter nosocomialis Ab22222]
gi|445436659|ref|ZP_21440664.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC021]
gi|260405475|gb|EEW98968.1| transcriptional regulator cysteine biosynthesis protein
[Acinetobacter sp. RUH2624]
gi|407439421|gb|EKF45946.1| hypothetical protein W9I_03094 [Acinetobacter nosocomialis Ab22222]
gi|444754658|gb|ELW79271.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC021]
Length = 307
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L SIP YQW++ II P DHPL
Sbjct: 121 KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ I L +S YPLITY F+GR K+D+ F ++ IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|169632736|ref|YP_001706472.1| CysB family transcriptional regulator [Acinetobacter baumannii SDF]
gi|169795080|ref|YP_001712873.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AYE]
gi|184159132|ref|YP_001847471.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ACICU]
gi|213158258|ref|YP_002320309.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB0057]
gi|215482630|ref|YP_002324822.1| HTH-type transcriptional regulator cbl [Acinetobacter baumannii
AB307-0294]
gi|239501050|ref|ZP_04660360.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB900]
gi|260556566|ref|ZP_05828784.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301346457|ref|ZP_07227198.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB056]
gi|301512443|ref|ZP_07237680.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB058]
gi|301594748|ref|ZP_07239756.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB059]
gi|332875961|ref|ZP_08443747.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6014059]
gi|384132826|ref|YP_005515438.1| cbl [Acinetobacter baumannii 1656-2]
gi|384144242|ref|YP_005526952.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385238527|ref|YP_005799866.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii TCDC-AB0715]
gi|387122938|ref|YP_006288820.1| transcriptional regulator [Acinetobacter baumannii MDR-TJ]
gi|407933721|ref|YP_006849364.1| transcriptional regulator [Acinetobacter baumannii TYTH-1]
gi|416145076|ref|ZP_11600193.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB210]
gi|417545118|ref|ZP_12196204.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC032]
gi|417550022|ref|ZP_12201102.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-18]
gi|417554379|ref|ZP_12205448.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-81]
gi|417560032|ref|ZP_12210911.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC137]
gi|417564759|ref|ZP_12215633.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC143]
gi|417570052|ref|ZP_12220910.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC189]
gi|417572099|ref|ZP_12222953.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Canada BC-5]
gi|417575522|ref|ZP_12226370.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-17]
gi|417870372|ref|ZP_12515338.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH1]
gi|417874412|ref|ZP_12519265.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH2]
gi|417881757|ref|ZP_12526067.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH4]
gi|421199041|ref|ZP_15656206.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC109]
gi|421203573|ref|ZP_15660710.1| CysB family transcriptional regulator [Acinetobacter baumannii
AC12]
gi|421454995|ref|ZP_15904342.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-123]
gi|421533537|ref|ZP_15979820.1| CysB family transcriptional regulator [Acinetobacter baumannii
AC30]
gi|421623233|ref|ZP_16064122.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC074]
gi|421626482|ref|ZP_16067311.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC098]
gi|421628216|ref|ZP_16069001.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC180]
gi|421632055|ref|ZP_16072718.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-13]
gi|421643936|ref|ZP_16084424.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-235]
gi|421647522|ref|ZP_16087939.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-251]
gi|421649493|ref|ZP_16089884.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC0162]
gi|421655381|ref|ZP_16095704.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-72]
gi|421660950|ref|ZP_16101132.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-83]
gi|421663994|ref|ZP_16104134.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC110]
gi|421666667|ref|ZP_16106755.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC087]
gi|421670662|ref|ZP_16110650.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC099]
gi|421673202|ref|ZP_16113146.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC065]
gi|421677879|ref|ZP_16117768.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC111]
gi|421689643|ref|ZP_16129323.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-143]
gi|421689903|ref|ZP_16129576.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-116]
gi|421695473|ref|ZP_16135080.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-692]
gi|421700680|ref|ZP_16140193.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-58]
gi|421704403|ref|ZP_16143848.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ZWS1122]
gi|421708181|ref|ZP_16147560.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ZWS1219]
gi|421788840|ref|ZP_16225114.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-82]
gi|421791268|ref|ZP_16227445.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-2]
gi|421794892|ref|ZP_16230983.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-21]
gi|421802140|ref|ZP_16238094.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Canada BC1]
gi|421806114|ref|ZP_16241987.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-A-694]
gi|421806775|ref|ZP_16242637.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC035]
gi|424051435|ref|ZP_17788967.1| hypothetical protein W9G_00124 [Acinetobacter baumannii Ab11111]
gi|424059016|ref|ZP_17796507.1| hypothetical protein W9K_00130 [Acinetobacter baumannii Ab33333]
gi|424062474|ref|ZP_17799960.1| hypothetical protein W9M_03296 [Acinetobacter baumannii Ab44444]
gi|425750329|ref|ZP_18868296.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-348]
gi|425754456|ref|ZP_18872318.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-113]
gi|445405928|ref|ZP_21431523.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-57]
gi|445447186|ref|ZP_21443673.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-A-92]
gi|445460002|ref|ZP_21447911.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC047]
gi|445472367|ref|ZP_21452446.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC338]
gi|445477113|ref|ZP_21454088.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-78]
gi|445490500|ref|ZP_21459213.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
AA-014]
gi|56131243|gb|AAV80244.1| putative LysR-type transcriptional regulator [Acinetobacter
baumannii]
gi|169148007|emb|CAM85870.1| transcriptional regulator cysteine biosynthesis (LysR family)
[Acinetobacter baumannii AYE]
gi|169151528|emb|CAP00295.1| transcriptional regulator cysteine biosynthesis (LysR family)
[Acinetobacter baumannii]
gi|183210726|gb|ACC58124.1| Transcriptional regulator [Acinetobacter baumannii ACICU]
gi|193078031|gb|ABO12954.2| putative LysR-type transcriptional regulator [Acinetobacter
baumannii ATCC 17978]
gi|213057418|gb|ACJ42320.1| transcriptional regulator, LysR family [Acinetobacter baumannii
AB0057]
gi|213987381|gb|ACJ57680.1| HTH-type transcriptional regulator cbl [Acinetobacter baumannii
AB307-0294]
gi|260409825|gb|EEX03125.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322509046|gb|ADX04500.1| cbl [Acinetobacter baumannii 1656-2]
gi|323519028|gb|ADX93409.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii TCDC-AB0715]
gi|332735827|gb|EGJ66868.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6014059]
gi|333367192|gb|EGK49206.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii AB210]
gi|342228059|gb|EGT92964.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH1]
gi|342229134|gb|EGT94004.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH2]
gi|342238512|gb|EGU02943.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH4]
gi|347594735|gb|AEP07456.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii MDR-ZJ06]
gi|385877430|gb|AFI94525.1| transcriptional regulator [Acinetobacter baumannii MDR-TJ]
gi|395522614|gb|EJG10703.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC137]
gi|395554275|gb|EJG20281.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC189]
gi|395556515|gb|EJG22516.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC143]
gi|395565937|gb|EJG27584.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC109]
gi|395571011|gb|EJG31670.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-17]
gi|398326947|gb|EJN43088.1| CysB family transcriptional regulator [Acinetobacter baumannii
AC12]
gi|400207667|gb|EJO38637.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Canada BC-5]
gi|400212785|gb|EJO43744.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-123]
gi|400383006|gb|EJP41684.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC032]
gi|400387990|gb|EJP51063.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-18]
gi|400390796|gb|EJP57843.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-81]
gi|404557809|gb|EKA63104.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-143]
gi|404565407|gb|EKA70575.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-116]
gi|404565804|gb|EKA70967.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-692]
gi|404569331|gb|EKA74418.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-58]
gi|404664991|gb|EKB32954.1| hypothetical protein W9G_00124 [Acinetobacter baumannii Ab11111]
gi|404669754|gb|EKB37646.1| hypothetical protein W9K_00130 [Acinetobacter baumannii Ab33333]
gi|404671426|gb|EKB39269.1| hypothetical protein W9M_03296 [Acinetobacter baumannii Ab44444]
gi|407190237|gb|EKE61456.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ZWS1122]
gi|407190794|gb|EKE62009.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ZWS1219]
gi|407902302|gb|AFU39133.1| transcriptional regulator [Acinetobacter baumannii TYTH-1]
gi|408506611|gb|EKK08317.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-235]
gi|408508706|gb|EKK10385.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-72]
gi|408513497|gb|EKK15115.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC0162]
gi|408516627|gb|EKK18200.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
IS-251]
gi|408693842|gb|EKL39440.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC074]
gi|408695753|gb|EKL41308.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC098]
gi|408703559|gb|EKL48954.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-83]
gi|408708255|gb|EKL53532.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC180]
gi|408710601|gb|EKL55827.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-13]
gi|408712291|gb|EKL57474.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC110]
gi|409988537|gb|EKO44707.1| CysB family transcriptional regulator [Acinetobacter baumannii
AC30]
gi|410384200|gb|EKP36718.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC099]
gi|410387021|gb|EKP39481.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC065]
gi|410387369|gb|EKP39824.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC087]
gi|410392760|gb|EKP45117.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC111]
gi|410400804|gb|EKP52970.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-82]
gi|410402829|gb|EKP54934.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-21]
gi|410403305|gb|EKP55402.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-2]
gi|410404528|gb|EKP56595.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Canada BC1]
gi|410407588|gb|EKP59572.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-A-694]
gi|410417318|gb|EKP69088.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC035]
gi|425487731|gb|EKU54089.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-348]
gi|425496952|gb|EKU63066.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-113]
gi|444759414|gb|ELW83884.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-A-92]
gi|444765763|gb|ELW90052.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
AA-014]
gi|444770032|gb|ELW94190.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC338]
gi|444773237|gb|ELW97333.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
OIFC047]
gi|444776620|gb|ELX00658.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-78]
gi|444781706|gb|ELX05621.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
Naval-57]
gi|452947982|gb|EME53463.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii MSP4-16]
Length = 307
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L SIP YQW++ II P DHPL
Sbjct: 121 KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ I L +S YPLITY F+GR K+D+ F ++ IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|288942149|ref|YP_003444389.1| LysR family transcriptional regulator [Allochromatium vinosum DSM
180]
gi|288897521|gb|ADC63357.1| transcriptional regulator, LysR family [Allochromatium vinosum DSM
180]
Length = 313
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 211/306 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R+V+E RQ N++ AA+AL+TSQPGVSK I +LE+EL I+IF R GKR+ +T
Sbjct: 1 MNLQQLRYVQEVARQGLNVSAAAEALFTSQPGVSKQIRQLEDELGIEIFRRQGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L ++ E++ L++IG EF G LTIATTHTQARY LP I++F ++P
Sbjct: 61 EPGRHVLAIAARLLGELDNLRQIGAEFGQETAGCLTIATTHTQARYVLPPAIRDFIARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+LSL QGNP Q+ +++ +AD+ I TE ++ + +L+S+PCY W +I PL HP+L
Sbjct: 121 DVRLSLRQGNPTQVCDLVIAGEADLVIATEAVAEAPELLSLPCYAWNRCVIAPLGHPILE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +SL+ I+ +P++TYD +F+GR ++R F L P IVL +++D+IKTYV + +GI
Sbjct: 181 SDPLSLEAIARWPIVTYDGAFTGRGLMNRAFHTHGLEPRIVLTALDADVIKTYVRMGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A D D L + ASHLF +++ + I++ ++LR YVY+FI+ +P L R+ I
Sbjct: 241 GLIAQMAHDPQTDAGLGVVDASHLFDASVTHLGIRRKSWLRGYVYAFIEGFAPHLTRRVI 300
Query: 301 NKILNN 306
+ L+
Sbjct: 301 ERALSE 306
>gi|91776022|ref|YP_545778.1| transcriptional regulator CysB-like protein [Methylobacillus
flagellatus KT]
gi|91710009|gb|ABE49937.1| transcriptional regulator, LysR family [Methylobacillus flagellatus
KT]
Length = 312
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 211/304 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++RE RQ +++ AA AL+TSQPGVSK I LE+EL++ IF R+GKR+ G+T
Sbjct: 1 MKIHQLRYIREVARQGLSVSLAADALHTSQPGVSKQIQLLEDELNLQIFKRNGKRLIGVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL+ E +M E++ +K++G EFS D+G LTIATTHTQARY LP +KEF ++P
Sbjct: 61 EPGKIILQLAERVMIEMDNIKRVGDEFSHEDSGTLTIATTHTQARYRLPAAVKEFMQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL++ QGNP Q+ E ++ +ADI I TE +S L+ +PCYQW I++P HPLL
Sbjct: 121 KVKLTIHQGNPTQVAEQVQKGEADIGIATESISSYSDLLCLPCYQWNRCIVMPQGHPLLA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L++I+ YPLITYD +F+G + + F L P +VL I++D+IKTYV L +G+
Sbjct: 181 EQPITLEKITRYPLITYDFAFTGGSLVSKVFEKAGLNPNVVLTAIDADVIKTYVNLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D RD +L + S LF + + + +++ YLR Y Y+FI+LL+P RK +
Sbjct: 241 GLVANMAYDPQRDSHLAMLDVSDLFPPSTTYIGLRRDAYLRGYAYAFIELLAPHYPRKAV 300
Query: 301 NKIL 304
L
Sbjct: 301 EAEL 304
>gi|332851071|ref|ZP_08433180.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6013150]
gi|332869680|ref|ZP_08438868.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6013113]
gi|332730235|gb|EGJ61560.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6013150]
gi|332732582|gb|EGJ63815.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
6013113]
Length = 307
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L SIP YQW++ II P DHPL
Sbjct: 121 KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ I L +S YPLITY F+GR K+D+ F ++ IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLKQIK-TDIFGVKTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|326317051|ref|YP_004234723.1| LysR family transcriptional regulator [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373887|gb|ADX46156.1| transcriptional regulator, LysR family [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 309
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 218/305 (71%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLT+ A+ L+TSQPGVS+ I ELEEEL ++IF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRTGFNLTDVARILHTSQPGVSRQIRELEEELGLEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG +L +E ++ E E L++ G +F A G L+IA TH+QARYALP+++++F FP
Sbjct: 61 PPGSTLLPIVERLLLEAENLQRAGHDFRASGEGRLSIAATHSQARYALPQVVRDFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V L L QG+P+Q+ EM+ + +ADI + TE L+ +L+++PCY+W + I+VP HPLL
Sbjct: 121 QVTLHLHQGSPRQVAEMLLSGEADIGVATEALAGYGELVTLPCYRWSHSIVVPPGHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L +L++++ +P+ITY+L ++GR +D F+ + L P +VL +++D+IKTYVEL MG
Sbjct: 181 LPEPPTLRQLARFPIITYELGYTGRAHIDEAFAREGLQPDVVLTAMDADVIKTYVELDMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+ASIA D RD++LR I A HLF ++R+ +++G++LR Y Y FI+ P L R+
Sbjct: 241 VGIVASIALDPERDRHLRMIDARHLFEVNLTRLGLRRGSWLRGYAYRFIEAFVPTLTREA 300
Query: 300 INKIL 304
+++ L
Sbjct: 301 VDEAL 305
>gi|292492453|ref|YP_003527892.1| LysR family transcriptional regulator [Nitrosococcus halophilus
Nc4]
gi|291581048|gb|ADE15505.1| LysR substrate-binding protein [Nitrosococcus halophilus Nc4]
Length = 306
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/305 (45%), Positives = 209/305 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +FVRE R+ +N++ AA+AL+ +QPGVS I +LE+EL + IF RHGKR+ G+T
Sbjct: 1 MKLQQLQFVREVTRRGYNVSAAAEALHATQPGVSNQIHQLEQELGVPIFERHGKRLTGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G AIL IE I+ E+E +K++ E + G L+IATTHTQARY LP +IK F ++P
Sbjct: 61 PAGSAILGMIERILGEVENIKQVSAEATDEHRGMLSIATTHTQARYILPPVIKAFRDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L + QG P QI EM D+AI TE + + L +PCY W ++VP +HPLL
Sbjct: 121 NVRLRMFQGTPHQIAEMAATGTVDLAIATEAIELFEDLAMLPCYDWNRSVVVPPNHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD+ F+ ++L P ++L ++D+IKTY+ L +GI
Sbjct: 181 CRPLTLEAVAKYPIVTYVFGFTGRSKLDKAFASKELIPNVILTATDADVIKTYLHLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD +D L++I ASHLF + + + I++GTYLR Y+Y+FI+L +P+L R+ +
Sbjct: 241 GIIASMAFDPEQDAPLKAIDASHLFEPSTTHIGIRRGTYLRRYIYAFIELFAPQLTRQVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAVH 305
>gi|359427872|ref|ZP_09218916.1| putative transcriptional regulator [Acinetobacter sp. NBRC 100985]
gi|358236763|dbj|GAB00455.1| putative transcriptional regulator [Acinetobacter sp. NBRC 100985]
Length = 307
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL ++ YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKISLDILAEYPLITYHGGFTGRSKIDKAFEDAHLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I +FGT + + +++G LR Y Y FI L SPK + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIKTG-IFGTNTTWIAVRKGHLLRGYGYEFISLCSPKTDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|332526885|ref|ZP_08402978.1| LysR family transcriptional regulator [Rubrivivax benzoatilyticus
JA2]
gi|332111327|gb|EGJ11311.1| LysR family transcriptional regulator [Rubrivivax benzoatilyticus
JA2]
Length = 318
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 208/308 (67%), Gaps = 4/308 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR+ FNLTE A+ L+TSQPGVS+ I ELE EL +DIF+R GKR+ GLT
Sbjct: 1 MNFQQLRSVRETVRRGFNLTEVAQVLHTSQPGVSRQIRELETELGVDIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG IL +E ++QE + LK+ G +++ G L IA TH+QARYALP +++F P
Sbjct: 61 APGATILPIVERLLQEADNLKRAGDDYAGQGKGTLVIAATHSQARYALPTAVRDFRAAHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P+Q+ E++ +AD+ + T +++ L+++PCY+W + ++VP H L
Sbjct: 121 DVQLRLHQGSPQQVAELLLEGEADLGVATALIATCPDLVALPCYRWTHSVVVPAGHVLAQ 180
Query: 181 LNS----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++L+ ++ +PLITY+ ++GR ++D FS + L +VL +++D+IKTYVEL
Sbjct: 181 EAERGVPLTLERLAEFPLITYEPGYTGRSQIDEAFSQKGLVLDLVLSAMDADVIKTYVEL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
MG+GIIA++A+D RD LR+I A HLF T ++ V +++G YLR YVY FI+ + L+
Sbjct: 241 GMGVGIIAAMAWDEQRDPGLRAIDARHLFATNMTHVGLRRGAYLRDYVYDFIRTFAAPLD 300
Query: 297 RKFINKIL 304
R +++ L
Sbjct: 301 RALVDRAL 308
>gi|345869778|ref|ZP_08821734.1| transcriptional regulator, LysR family [Thiorhodococcus drewsii
AZ1]
gi|343922640|gb|EGV33339.1| transcriptional regulator, LysR family [Thiorhodococcus drewsii
AZ1]
Length = 313
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 213/304 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R++ E VRQ N++ AA+AL+TSQPGVSK I +LE+EL ++IF R GKR+ +T
Sbjct: 1 MNLQQLRYIHEVVRQGLNVSAAAEALFTSQPGVSKQIRQLEDELGVEIFARQGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L ++ +++ L+++G EF+ G L+IATTHTQA Y LPK++ F ++P
Sbjct: 61 EPGHEVLAIAARMLGDLDNLRQVGAEFNNESVGKLSIATTHTQACYVLPKVVHAFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V LSL QGNP Q+ E++R+ +AD+ I TE ++ +L+S+PCY+W + II PL HP+L
Sbjct: 121 QVGLSLQQGNPPQVCELVRSGRADLVIATESVADYPELLSLPCYEWNHCIIAPLGHPILD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+SL+EI+ +P++TYD +F+GR +++R F L +VL +++D+IKTYV + +GI
Sbjct: 181 SASLSLEEIARWPIVTYDSAFTGRNQINRAFQSHGLEARVVLTALDADVIKTYVRMELGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D + D L + A HLF ++++ + +++ +LR Y Y FI+L +P L R+ I
Sbjct: 241 GIVARMAYDPSLDIGLGMLDAGHLFDSSVTHLGLRRNAWLRGYTYDFIELFAPHLTRRVI 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DHAL 304
>gi|347538637|ref|YP_004846061.1| LysR family transcriptional regulator [Pseudogulbenkiania sp. NH8B]
gi|345641814|dbj|BAK75647.1| transcriptional regulator, LysR family [Pseudogulbenkiania sp.
NH8B]
Length = 313
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 218/305 (71%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E +Q N++EAA+ L+TSQPG+SK I LE+EL I +FIR+GKR+ ++
Sbjct: 1 MKLQQLRYLVEVAKQGLNVSEAAEKLHTSQPGISKQIRLLEDELGIQVFIRNGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +LR E I++E + LK++G EFS G LTIATTHTQARYALP I EF + P
Sbjct: 61 EPGKEVLRIAERILREAQNLKRVGDEFSRESEGALTIATTHTQARYALPHTIAEFLKRCP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG+P QI +M+ + +AD+AI TE +S +L +PCY+W ++VP H L
Sbjct: 121 KVRLSIKQGSPTQICDMVLSGEADLAIATEGISLYKELAMLPCYEWNRCVVVPKGHELSQ 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L+ ++L +I+ +P+ITYD +F+GR K+++ F+ LTP +VL I++D+IKTYV L +G
Sbjct: 181 LDRPLTLADIARHPIITYDFAFAGRSKINQAFTDAGLTPTVVLTAIDTDVIKTYVSLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIAS+A++ RD L +I ASHLF +++++ I++ YLR + Y+FI+L +P L+R+
Sbjct: 241 VGIIASMAYEPERDLALTAIDASHLFEPSVTKIGIRRDAYLRGFAYTFIELFAPHLHRRE 300
Query: 300 INKIL 304
I+ L
Sbjct: 301 IDAAL 305
>gi|152981632|ref|YP_001352505.1| cys regulon transcriptional activator [Janthinobacterium sp.
Marseille]
gi|151281709|gb|ABR90119.1| cys regulon transcriptional activator [Janthinobacterium sp.
Marseille]
Length = 308
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 141/304 (46%), Positives = 204/304 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE R +NLTE A L+TSQPGVS+ I ELEEEL +DIF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIRETARCGYNLTEVANVLFTSQPGVSRQIRELEEELGVDIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ IL+ I+ ++ E E L++ +E++ + G L +ATTHTQARY LPK+++ F +FP
Sbjct: 61 DPGRGILQIIDRLLLEAENLQRASQEYAGQEIGTLAVATTHTQARYMLPKVVQVFRKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+++L Q P+ I E + + +ADI I TE LS + L+S PCY+W + ++VP HPLL
Sbjct: 121 KVRIALQQSTPEHIAEWVLSGKADIGIATEGLSQFEDLVSFPCYRWHHSVVVPDGHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L +++ Y LITYDL F+GR +D F +T IVL ++SD+I+ YV L +G+
Sbjct: 181 KKLITLADLAQYSLITYDLGFTGRGHIDEAFKQADITTDIVLTAMDSDVIQQYVLLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A N L+ I ASHLF ++R+ +++G YLR Y Y FI+ +P L R I
Sbjct: 241 GIVASMALQQNGSNGLKVIDASHLFAQNVTRLAVRRGAYLRQYTYDFIQQFAPDLTRADI 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DEAM 304
>gi|399020695|ref|ZP_10722822.1| transcriptional regulator [Herbaspirillum sp. CF444]
gi|398094462|gb|EJL84825.1| transcriptional regulator [Herbaspirillum sp. CF444]
Length = 311
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/307 (47%), Positives = 207/307 (67%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R FNLTE A L+TSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVEIFERNGKRLIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL IE ++ E E L++ +E++ +G LTIATTHTQARY LP++++ F FP
Sbjct: 61 EPGKGILHIIERLLLEAENLRQASQEYAGEQSGTLTIATTHTQARYVLPRVVQAFRAAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V+++L Q P+ I E + + +AD+ I TE LS L+S PCY W +VI+VP HPLL
Sbjct: 121 QVRIALQQSAPEHIAEWVMSGKADVGIATEGLSQFKDLVSFPCYTWNHVIVVPQGHPLLS 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L + I+L+E++ + LITYD+ F+GR +D F + IVL ++SD+I+ YV L +G
Sbjct: 181 LRHPITLEELAAHSLITYDVGFTGRGHIDDAFRTAGIEKDIVLTAMDSDVIQQYVALGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+AS+A + + L +I ASHLF I+R+ +++G YLR+Y Y FI +P+L R
Sbjct: 241 VGIVASMAIEQGKHHGLEAIEASHLFAQNITRLAVRRGAYLRAYTYDFILQFAPELKRAD 300
Query: 300 INKILNN 306
I LN
Sbjct: 301 IVAALNE 307
>gi|298369984|ref|ZP_06981300.1| cys regulon transcriptional activator [Neisseria sp. oral taxon 014
str. F0314]
gi|298281444|gb|EFI22933.1| cys regulon transcriptional activator [Neisseria sp. oral taxon 014
str. F0314]
Length = 316
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 218/306 (71%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL + IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVFRHNLNVSEAADALFTSQPGISKQIRLLEEELGVQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LTIATTHTQARYALP+I+ +F +P
Sbjct: 61 QPGKAVLELSERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPEIVAQFVRNYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV+L++ QG+P I +M+ +ADI I+TE + +L +PCY+W + +IVP DHPLL
Sbjct: 121 KVQLTIKQGSPSAIAQMVSGGEADIGIITEAIDDHPELCKLPCYEWNHAVIVPQDHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
+ +SLK+++++PL+TY+ +F+ + R F+ +L P + L ++D++KTYV+L +
Sbjct: 181 CRHPLSLKDLASFPLVTYEFAFNNGSSIARAFTRARLEQPDVALSAADTDVLKTYVKLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ D++L+ I A+HLF + + + ++ TYLR Y Y FI L +PKLNR+
Sbjct: 241 GVGVMAKMAYNPQTDQDLQLIDAAHLFEPSPTWIALRPDTYLRGYTYDFINLFAPKLNRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 AVDRIL 306
>gi|406035687|ref|ZP_11043051.1| transcriptional regulator CysB-like protein [Acinetobacter parvus
DSM 16617 = CIP 108168]
Length = 307
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/303 (48%), Positives = 207/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYILPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL+ ++ YPLITY F+GR K+D+ F +L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKISLEVLAEYPLITYHGGFTGRSKIDKAFEDAQLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SPK + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-TDIFGANTTWIAVRKGHLLRGYGYEFISLCSPKTDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|224824635|ref|ZP_03697742.1| transcriptional regulator, LysR family [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603128|gb|EEG09304.1| transcriptional regulator, LysR family [Pseudogulbenkiania
ferrooxidans 2002]
Length = 313
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 218/305 (71%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E +Q N++EAA+ L+TSQPG+SK I LE+EL I +FIR+GKR+ ++
Sbjct: 1 MKLQQLRYLVEVAKQGLNVSEAAEKLHTSQPGISKQIRLLEDELGIQVFIRNGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +LR E I++E + LK++G EFS G LTIATTHTQARYALP I EF + P
Sbjct: 61 EPGKEVLRIAERILREAQNLKRVGDEFSRESEGALTIATTHTQARYALPHTIAEFLKRCP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+LS+ QG+P QI +M+ + +AD+AI TE +S +L +PCY+W ++VP H L
Sbjct: 121 KVRLSIKQGSPTQICDMVLSGEADLAIATEGISLYKELAMLPCYEWNRCVVVPKGHELSQ 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L+ ++L +I+ +P+ITYD +F+GR K+++ F+ LTP +VL I++D+IKTYV L +G
Sbjct: 181 LDRPLTLADIARHPIITYDFAFAGRSKINQAFTDAGLTPTVVLTAIDTDVIKTYVSLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIAS+A++ RD L +I ASHLF +++++ I++ YLR + Y+FI+L +P L+R+
Sbjct: 241 VGIIASMAYEPERDLALTAIDASHLFEPSVTKIGIRRDAYLRGFAYTFIELFAPHLHRRE 300
Query: 300 INKIL 304
I+ L
Sbjct: 301 IDAAL 305
>gi|425746399|ref|ZP_18864429.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-323]
gi|425486276|gb|EKU52648.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-323]
Length = 307
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL +++YPLITY F+GR K+D+ F +L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKISLDVLADYPLITYHGGFTGRSKIDKAFEDAQLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I +++FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-TNVFGVNTTWIAVRKGHLLRGYGYEFISLCSPETDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|403675457|ref|ZP_10937622.1| transcriptional regulator CysB-like protein [Acinetobacter sp. NCTC
10304]
Length = 307
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L SIP YQW++ II P +HPL
Sbjct: 121 KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQEHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ I L +S YPLITY F+GR K+D+ F ++ IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|30248586|ref|NP_840656.1| transcriptional regulator CysB-like protein [Nitrosomonas europaea
ATCC 19718]
gi|30180181|emb|CAD84483.1| Bacterial regulatory protein, LysR family [Nitrosomonas europaea
ATCC 19718]
Length = 305
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 207/300 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R + E +RQN+NLTE A AL+TSQ GVSK I +LE+EL+ID+FIR GKR+ GLT
Sbjct: 1 MNFQQLRIISETIRQNYNLTEVANALFTSQSGVSKHIKDLEDELNIDLFIRKGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +++ ++ I+ + +K++ ++FS +D G LT+ATTHTQA+YALP ++++F FP
Sbjct: 61 APGKELVKIVDRILLDTRNIKRLAEQFSQHDQGELTVATTHTQAQYALPDVVRQFKEIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L + +P +I M+ N QADI I TE L + +L+S P Y W + IIVP +HPL
Sbjct: 121 KVHLVLHESSPGEIVSMLLNGQADIGIATEALESTSELVSFPYYTWHHAIIVPAEHPLQS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ ++ +P+ITY F+GR ++D+ FS +LTP I + +++D+IKTYV L MGI
Sbjct: 181 IHPLTLEAVAQFPIITYHKGFTGRSRIDQAFSRAELTPNIAMSALDADVIKTYVTLGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AF RD L + SHLF + + I++ YLR Y Y FI+L P L+R I
Sbjct: 241 GIVASVAFTPERDTKLIKLDGSHLFEQNTTCISIRRNHYLRGYAYRFIELCIPSLSRDTI 300
>gi|262278180|ref|ZP_06055965.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
calcoaceticus RUH2202]
gi|262258531|gb|EEY77264.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
calcoaceticus RUH2202]
Length = 307
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/303 (48%), Positives = 210/303 (69%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ ++F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLGIVERMLVDAENIKRLAEDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L SIP YQW++ II P +HPL+
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQNHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L+ +++YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 ADKITLELLADYPLITYHGGFTGRSKIDKAFEEAHLDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D+ RD L+ + + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNAVAYDTERDHRLKQ-TKTDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|257091870|ref|YP_003165511.1| transcriptional regulator CysB-like protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044394|gb|ACV33582.1| transcriptional regulator, LysR family [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 311
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 210/298 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE +RQ+FNLT A ALYTSQPGVSK I +LE+EL I+IF+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETLRQDFNLTAVASALYTSQPGVSKHIKDLEDELGIEIFVRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + ++ I+ + L++I +F++ +TG+ +ATTHTQARYALP+IIK F +P
Sbjct: 61 EPGKELAEVVDRILLGTQNLRRIADQFASRETGHFVVATTHTQARYALPQIIKWFKTDYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L+L QG+P I E + + +AD+ I TE L +L + P Y+W + +IVP HPLL
Sbjct: 121 RVHLALHQGSPVDIAEKLVSGEADVGIATERLDQVPELETFPFYRWHHALIVPHGHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I YP+ITY F+GR +D+ F+ + P IVL I++D+IKTYVEL +G+
Sbjct: 181 VDKLTLEVIGEYPIITYHEGFTGRTHIDKAFADAGVVPDIVLSAIDADVIKTYVELELGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GI+AS+A+D+ +D+NL I+ HLF + +R+ +++GTYLRSY +FI+ + P + +
Sbjct: 241 GIVASMAYDACKDRNLTLIAVPHLFPESTTRLAVRRGTYLRSYALAFIEKVCPDIGEE 298
>gi|239813080|ref|YP_002941990.1| LysR family transcriptional regulator [Variovorax paradoxus S110]
gi|239799657|gb|ACS16724.1| transcriptional regulator, LysR family [Variovorax paradoxus S110]
Length = 314
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 215/306 (70%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVR FNLTE A L+TSQPGVS+ I ELEEEL I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG +L IE ++ E L+ G+EF A +G L++A TH+QARYA+P ++EF QFP
Sbjct: 61 EPGGHVLPIIERMLLESSNLRHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRAQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+PKQI +M+ + +AD+ I TE L +L+++PCY+W + +IVP H LL
Sbjct: 121 NVKLHLHQGSPKQIAQMLIDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHA-LL 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ +PLITYD F+GR ++D F+ + L P IVL +++D+IKTYV+L MG+
Sbjct: 180 DAPLTLEALTRHPLITYDTGFTGRSRIDEAFAQRGLAPNIVLAAMDADVIKTYVQLGMGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+++ RD LR++ A LFG ++++ +++G YLR YVY+FI+ +P L R +
Sbjct: 240 GIVAGVAYETERDTQLRALDAGRLFGINMTKLAVRRGNYLRKYVYAFIESFAPTLTRAVV 299
Query: 301 NKILNN 306
K L +
Sbjct: 300 EKALGD 305
>gi|119897623|ref|YP_932836.1| transcriptional regulator CysB-like protein [Azoarcus sp. BH72]
gi|119670036|emb|CAL93949.1| putative HTH-type transcriptional regulator cbl [Azoarcus sp. BH72]
Length = 311
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 202/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE VR+NFNLTE A ALYT+Q GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIVRETVRRNFNLTEVANALYTAQSGVSKHIKDLEDELGVELFVRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L +E I+ + + +K++G++F+ D G+L IATTHTQARYALP ++ F +FP
Sbjct: 61 EPGKELLPIVERILLDTQNIKRLGEQFAQKDKGHLAIATTHTQARYALPPVVTRFKEEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q PK+I ++R+ Q DI I TE L D L+S P YQW++ +IVP DHPL
Sbjct: 121 KVHLELHQCGPKEIVSLLRSGQVDIGIATEALGEEDDLVSFPFYQWQHTLIVPEDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YP+ITY F+GR ++D F+ +TP IV+ +++D+IK YVEL G+
Sbjct: 181 VQPLTLEAVAEYPIITYHEGFTGRTRIDAAFARAGITPDIVMSALDADVIKAYVELGHGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GIIA++AF RD L+ + + LF + + +++G YLR Y FI+ SP L
Sbjct: 241 GIIAAMAFHPQRDAGLKLLDSKGLFEMNTTWISLRRGHYLRGYALRFIECCSPALT 296
>gi|402756462|ref|ZP_10858718.1| transcriptional regulator CysB-like protein [Acinetobacter sp. NCTC
7422]
Length = 307
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 206/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL ++ YPLITY F+GR K+D+ F +L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKISLDVLAEYPLITYHGGFTGRSKIDKAFEDAQLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPQTDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|424745708|ref|ZP_18173969.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-141]
gi|422941897|gb|EKU36960.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-141]
Length = 307
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/303 (48%), Positives = 209/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ ++F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLGIVERMLVDAENIKRLAEDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L SIP YQW++ II P +HPL+
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQNHPLVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ +++YPLITY F+GR K+D+ F +L IV+ +++D+IKTYVEL MG+
Sbjct: 181 AEKITLELLADYPLITYHGGFTGRSKIDKAFEEAQLDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ + + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDTERDHRLKQ-TKTDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|299769141|ref|YP_003731167.1| transcriptional regulator CysB-like protein [Acinetobacter
oleivorans DR1]
gi|298699229|gb|ADI89794.1| transcriptional regulator CysB-like protein [Acinetobacter
oleivorans DR1]
Length = 307
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/303 (48%), Positives = 209/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ ++F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLGIVERMLVDAENIKRLAEDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L SIP YQW++ II P +HPL+
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQNHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L+ +++YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 ADKITLELLADYPLITYHGGFTGRSKIDKAFEEAHLDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ + + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDTERDHRLKQ-TKTDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|253999224|ref|YP_003051287.1| transcriptional regulator CysB-like protein [Methylovorus
glucosetrophus SIP3-4]
gi|313201312|ref|YP_004039970.1| LysR family transcriptional regulator [Methylovorus sp. MP688]
gi|253985903|gb|ACT50760.1| transcriptional regulator, LysR family [Methylovorus glucosetrophus
SIP3-4]
gi|312440628|gb|ADQ84734.1| transcriptional regulator, LysR family [Methylovorus sp. MP688]
Length = 311
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 214/306 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M LHQ R+V E +Q N+++AA+ L+TSQPGVSK I LEEEL + IF+R+GKR+ G+T
Sbjct: 1 MKLHQLRYVHEVAKQGMNISQAAETLHTSQPGVSKQIQLLEEELQLQIFLRNGKRLVGVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL + +M+E+ +K++G++F+ G L IATTHTQARY LP +K FT Q+P
Sbjct: 61 EPGKIILDLADRVMREMNNIKRVGEDFTQKQAGTLVIATTHTQARYRLPVAVKAFTEQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL++ QGNP Q+ E + + +ADI I TE +S +KL+++PCY W ++VP HPLL
Sbjct: 121 DVKLTIHQGNPSQVAEQVASGEADIGIATEAISKEEKLVALPCYDWNRCVVVPHGHPLLT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++LK+I+ YPLITYD +G + F + LTP +VL I++D+IKTYV L MGI
Sbjct: 181 DTPLTLKKIAQYPLITYDFGVTGGSVVSHVFEKENLTPNVVLTAIDADVIKTYVGLGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A+D +RD L + ASHLF + + + ++ T+LR Y+Y FI+LL+P L++K +
Sbjct: 241 GLMASMAYDKDRDSGLAMLDASHLFPVSTTYLGFRRDTFLRGYIYGFIQLLAPHLDKKTV 300
Query: 301 NKILNN 306
N + +
Sbjct: 301 NAAIQS 306
>gi|262379428|ref|ZP_06072584.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
radioresistens SH164]
gi|262298885|gb|EEY86798.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
radioresistens SH164]
Length = 307
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLNIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L S+P Y WE+ II P HPL
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASVPYYTWEHSIITPQHHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +I L++++NYP+ITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 LENIRLEDLANYPIITYHGGFTGRSKIDKAFEAANIEVNIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNNVAYDAERDYRLKQIQ-TDIFGLNTTWLAVRKGHLLRGYGYEFISLCSPEADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|255320796|ref|ZP_05361971.1| HTH-type transcriptional regulator cbl [Acinetobacter
radioresistens SK82]
gi|421854681|ref|ZP_16287066.1| cys regulon transcriptional regulator [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255302173|gb|EET81415.1| HTH-type transcriptional regulator cbl [Acinetobacter
radioresistens SK82]
gi|403189696|dbj|GAB73267.1| cys regulon transcriptional regulator [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 307
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLNIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L S+P Y WE+ II P HPL
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASVPYYTWEHSIITPQHHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +I L++++NYP+ITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 LENIRLEDLANYPIITYHGGFTGRSKIDKAFEAANIEVDIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNNVAYDAERDYRLKQIQ-TDIFGLNTTWLAVRKGHLLRGYGYEFISLCSPEADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|421465503|ref|ZP_15914190.1| cys regulon transcriptional regulator Cbl [Acinetobacter
radioresistens WC-A-157]
gi|400203770|gb|EJO34755.1| cys regulon transcriptional regulator Cbl [Acinetobacter
radioresistens WC-A-157]
Length = 307
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLNIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L S+P Y WE+ II P HPL
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASVPYYTWEHSIITPQHHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +I L++++NYP+ITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 LENIRLEDLANYPIITYHGGFTGRSKIDKAFETANIEVDIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNNVAYDAERDYRLKQIQ-TDIFGLNTTWLAVRKGHLLRGYGYEFISLCSPEADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|332527261|ref|ZP_08403329.1| LysR family transcriptional regulator [Rubrivivax benzoatilyticus
JA2]
gi|332111681|gb|EGJ11662.1| LysR family transcriptional regulator [Rubrivivax benzoatilyticus
JA2]
Length = 339
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 211/308 (68%), Gaps = 4/308 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ FNLT A+ L+TSQPGVS+ + ELE+EL +D+F+R GKR+ GLT
Sbjct: 1 MNFQQLRAVREAVRQRFNLTSVAEVLHTSQPGVSRQVRELEDELGVDLFVRVGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ L IE ++ E + L++ G +F+ +G LT+A TH+QARYALP ++++F P
Sbjct: 61 EPGKVALPIIERLLAEADNLRRAGADFARAGSGTLTVAATHSQARYALPPVVRDFLAANP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+QI + + +ADI + TE L+ ++L+++PCY+W +V++VP H L
Sbjct: 121 QVTLHLNQGSPRQIARWLIDGEADIGVATEALADYEELVALPCYRWSHVVVVPQGHALAD 180
Query: 181 LN----SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+ ++L+ ++ +PL+TY+ ++GR +D F + L IVL +++D++KTYVEL
Sbjct: 181 EDRRGERLTLERLAQFPLVTYEPGYTGRRHIDEAFEREGLAREIVLAAMDADVVKTYVEL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+ASIA+D RD+ L +I HLF +R+ +++GTYLR Y Y FI+ + L+
Sbjct: 241 GLGVGIVASIAYDPARDQGLHAIDVRHLFEVNTTRLAVRRGTYLRDYAYDFIQTFASPLS 300
Query: 297 RKFINKIL 304
R +++ L
Sbjct: 301 RGLVDRAL 308
>gi|334131473|ref|ZP_08505235.1| HTH-type transcriptional regulator cysB [Methyloversatilis
universalis FAM5]
gi|333442946|gb|EGK70911.1| HTH-type transcriptional regulator cysB [Methyloversatilis
universalis FAM5]
Length = 307
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 211/305 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R+V E ++N N++EAA+AL+TSQ GVS+ I LEEEL +D+F+R GKR+ +T
Sbjct: 1 MNLQQLRYVAEVAQRNLNVSEAARALHTSQSGVSRQISLLEEELGVDVFVRQGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ ++ +++++ L+++G E+++ + G L+IATTHTQARY LP ++ EF P
Sbjct: 61 RPGEEVIAIARRMLRDVGALRQVGDEYASGEQGRLSIATTHTQARYVLPHVLSEFMRAHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L QGNP Q E + + AD+ I TE + D L+S+PCYQW +I P HPLL
Sbjct: 121 GVQIELHQGNPTQCCEYVLSGAADLVIATEAIDEYDLLVSLPCYQWNRCLIAPPGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITYD +F+G ++++ F+ + LTP + + I++DIIKTYV L +G+
Sbjct: 181 VKPLTLEAIADWPLITYDFAFTGGSRVNQTFAERGLTPRVAMSAIDADIIKTYVALGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ +D+ LR+I SHLF + +R+ + + +LR Y Y+FI+ + L R+ +
Sbjct: 241 GIVAQMAFDAEQDRGLRAIDCSHLFEPSTTRIGLHRNGWLRGYTYTFIQAFAASLTRETV 300
Query: 301 NKILN 305
++ L
Sbjct: 301 DRALG 305
>gi|383757800|ref|YP_005436785.1| LysR family transcriptional regulator [Rubrivivax gelatinosus
IL144]
gi|381378469|dbj|BAL95286.1| transcriptional regulator, LysR family [Rubrivivax gelatinosus
IL144]
Length = 338
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 209/308 (67%), Gaps = 4/308 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VREAVRQ FNLT A+ L+TSQPGVS+ + ELE+EL +D+F+R GKR+ GLT
Sbjct: 1 MNFQQLRAVREAVRQRFNLTSVAEVLHTSQPGVSRQVRELEDELGVDLFVRVGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ L IE ++ E + LK+ G +F+ +G LT+A TH+QARYALP ++++F P
Sbjct: 61 EPGKVALPIIERLLAESDNLKRAGADFARAGSGTLTVAATHSQARYALPPVVRDFLAANP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P+QI + + +ADI + TE L+ D+L+++PCY+W +V++VP H L
Sbjct: 121 QVTLHLNQGSPRQIARWLIDGEADIGVATEALADYDELVALPCYRWSHVVVVPQGHALAE 180
Query: 181 LN----SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+ ++L+ ++ +PL+TY+ ++GR +D F + L IVL +++D++KTYVEL
Sbjct: 181 EDRQGVGLTLERLAQFPLVTYEPGYTGRRHIDEAFERENLGREIVLAAMDADVVKTYVEL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GIIASIA+D RD L +I HLF +R+ +++G YLR Y Y FI+ + L+
Sbjct: 241 GLGVGIIASIAYDPARDHGLHAIDVRHLFEVNTTRLAVRRGIYLRDYAYDFIQTFASPLS 300
Query: 297 RKFINKIL 304
R +++ L
Sbjct: 301 RALVDRAL 308
>gi|319779267|ref|YP_004130180.1| LysR family transcriptional regulator [Taylorella equigenitalis
MCE9]
gi|397661506|ref|YP_006502206.1| putative LysR-family transcriptional regulator [Taylorella
equigenitalis ATCC 35865]
gi|317109291|gb|ADU92037.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Taylorella equigenitalis MCE9]
gi|394349685|gb|AFN35599.1| putative LysR-family transcriptional regulator [Taylorella
equigenitalis ATCC 35865]
gi|399114567|emb|CCG17361.1| putative LysR-family transcriptional regulator [Taylorella
equigenitalis 14/56]
Length = 314
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 216/310 (69%), Gaps = 5/310 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ QFR+V E V NFNLT+AAK L+TSQPG+SK+IIELEEEL IF R+GKR+RGLT
Sbjct: 1 MNIQQFRYVLETVNNNFNLTDAAKKLHTSQPGISKSIIELEEELGFQIFERNGKRLRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG+A++ I ++ E+E +K++ E+ ++D G L I THTQARY LP+II +F ++P
Sbjct: 61 KPGKAVVSVIRRLILEVENIKRLSNEYVSHDEGVLVIGCTHTQARYFLPEIILDFKKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++SL++ +P Q+ M+ ND+ D+A TE L+ ++ PCY W++ +++ DH L
Sbjct: 121 GVQVSLIESSPPQLANMLLNDELDVAFATETLAQVPGVVIFPCYDWQHFLVMREDHELAE 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
L S +SL++IS YPLITY + F+GR +D F + IVLE I++D+IKTYV+
Sbjct: 181 LTSSQIKELSLEDISKYPLITYSIQFTGRPSIDAAFEKAGIESNIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +G+GIIA +A+D RD+ L I HLFG IS++ +++G + R YV+ FI++ +P +
Sbjct: 241 VGLGLGIIAGMAYDPRRDRGLIGIPVGHLFGHHISKIGLRKGVFARDYVFEFIRMCAPGV 300
Query: 296 NRKFINKILN 305
+K I ++L+
Sbjct: 301 EKKKIIELLH 310
>gi|407802281|ref|ZP_11149123.1| transcriptional regulator CysB [Alcanivorax sp. W11-5]
gi|407023956|gb|EKE35701.1| transcriptional regulator CysB [Alcanivorax sp. W11-5]
Length = 324
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R + N++ A+ALYTSQPG+SK I LE+EL +DIF R GK + +T
Sbjct: 1 MKLQQLRYAWEVARHDLNVSATAQALYTSQPGISKQIRMLEDELGVDIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQAILR I+Q++E +K++ EF G L+IATTHTQARYALP +I+ FT +FP
Sbjct: 61 PAGQAILRLAGEILQQVESIKRVAHEFRDETRGELSIATTHTQARYALPPVIRAFTERFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM N D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGTVDFAIATEALDLFSDLIMMPCYRWNRTVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++L ++ +PL+TY F+GR KLD F + LTP +V ++D+IKTYV L MG+
Sbjct: 181 VKTLTLDTLAEHPLVTYTFGFTGRSKLDEAFRSRGLTPRVVFTAADADVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A D +DK L + ASHLF + +R+ ++GT+LR ++Y FI+ +P L R+ +
Sbjct: 241 GIIAHMALDPEQDKGLVKLDASHLFEPSTTRIGFRKGTFLRGFMYEFIRQFAPHLTRELV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 DSALS 305
>gi|425740598|ref|ZP_18858766.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-487]
gi|425494621|gb|EKU60820.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-487]
Length = 307
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 204/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L SI YQW++ II P DHPL
Sbjct: 121 KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASILYYQWQHSIITPQDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ I L +S YPLITY F+GR K+D+ F ++ IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|217969056|ref|YP_002354290.1| transcriptional regulator CysB-like protein [Thauera sp. MZ1T]
gi|217506383|gb|ACK53394.1| transcriptional regulator, LysR family [Thauera sp. MZ1T]
Length = 309
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 207/306 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR+ FNLTE A AL+TSQ GVSK I +LE+EL I++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRRGFNLTEVANALFTSQSGVSKHIKDLEDELGIELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ ++ +E ++ + +K + +++ D G LT+ TTHTQARYALPK++ F +P
Sbjct: 61 PPGEELVVMVERMLLDAANIKHLAEQYRGRDQGQLTVVTTHTQARYALPKVVAAFKRAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P +I +M+ + +ADI + TE L+ +L S P Y W++ ++VP HPL
Sbjct: 121 RVLLKLHQGSPHEIVQMLLDGEADIGVATEALAEVPELASFPYYGWQHAVVVPAGHPLEE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY F+GR ++D+ F+ LTP +V+ +++D+IKTYVEL +G+
Sbjct: 181 AHPLTLEAIATHPLITYHEGFTGRTRIDQTFARAGLTPGVVMSALDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AF+ RD LR + + HLF ++R+ +++G YLR + Y FI+L +P+L +
Sbjct: 241 GILASMAFNPARDPGLRKLDSDHLFAENVTRIAVRRGHYLRGFAYRFIELCAPELTETVV 300
Query: 301 NKILNN 306
+
Sbjct: 301 ADAVGG 306
>gi|293609842|ref|ZP_06692144.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135623|ref|YP_004996273.1| transcriptional activator of the glutamate synthase operon (LysR
family) [Acinetobacter calcoaceticus PHEA-2]
gi|427424904|ref|ZP_18915016.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-136]
gi|292828294|gb|EFF86657.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123068|gb|ADY82591.1| transcriptional activator of the glutamate synthase operon (LysR
family) [Acinetobacter calcoaceticus PHEA-2]
gi|425698221|gb|EKU67865.1| cys regulon transcriptional regulator Cbl [Acinetobacter baumannii
WC-136]
Length = 307
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 208/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ ++F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLSIVERMLVDAENIKRLAEDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L SIP YQW++ II P +HPL+
Sbjct: 121 KVHLILQQASPVEISEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQNHPLVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L+ ++ YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 ADKITLELLAEYPLITYHGGFTGRSKIDKAFEEAHLDADIVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ + + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDTERDYRLKQ-TKTDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|226952150|ref|ZP_03822614.1| transcriptional regulator cysteine biosynthesis [Acinetobacter sp.
ATCC 27244]
gi|226837099|gb|EEH69482.1| transcriptional regulator cysteine biosynthesis [Acinetobacter sp.
ATCC 27244]
Length = 307
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLNIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL+ ++ YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDHISLELLAEYPLITYHGGFTGRSKIDKAFEDAHLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPTTDIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|294651037|ref|ZP_06728377.1| transcriptional regulator of cysteine biosynthesis [Acinetobacter
haemolyticus ATCC 19194]
gi|292823138|gb|EFF82001.1| transcriptional regulator of cysteine biosynthesis [Acinetobacter
haemolyticus ATCC 19194]
Length = 305
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/302 (48%), Positives = 204/302 (67%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLNIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I EM+ +ADI I TE L+ + L S+P Y+W + II P DHPL
Sbjct: 121 KVHLVLQQASPVEIAEMLLQGEADIGIATESLTTEENLASVPYYEWHHSIITPKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ISL+ ++ YPLITY F+GR K+D+ F L IV+ +++D+IKTYVEL MG+
Sbjct: 181 LDHISLELLAEYPLITYHGGFTGRSKIDKAFEDAHLHADIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDAERDYRLQQIK-TDMFGVNTTWIAVRKGHLLRGYGYEFISLCSPTTDIKAL 299
Query: 301 NK 302
K
Sbjct: 300 KK 301
>gi|406039719|ref|ZP_11047074.1| transcriptional regulator CysB-like protein [Acinetobacter ursingii
DSM 16037 = CIP 107286]
Length = 307
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/303 (47%), Positives = 207/303 (68%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLGIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L S+P YQWE+ IIVP +HPL
Sbjct: 121 KVHLVLQQASPTEISEMLLQGEADIGIATESLTTEENLASVPYYQWEHSIIVPQNHPLAH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL+ ++N+P+ITY F+GR K+D+ F + +V+ +++D+IKTYVEL MG+
Sbjct: 181 ETKISLEALANFPIITYHGGFTGRSKIDKAFEDAGIDVDLVMSALDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K +
Sbjct: 241 GIVNDVAYDRERDYRLKQIK-TDIFGLNTTWIAVRKGHLLRGYGYEFISLCSPEADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|241759259|ref|ZP_04757365.1| sulfur assimilation transcriptional regulator, LysR family
[Neisseria flavescens SK114]
gi|241320395|gb|EER56692.1| sulfur assimilation transcriptional regulator, LysR family
[Neisseria flavescens SK114]
Length = 331
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 217/306 (70%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 16 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 75
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LTIATTHTQARYALPKI+ EF +P
Sbjct: 76 QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPKIVAEFVKNYP 135
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + +AD+AI+TE + +L +PCY+W + +IVP DHPLL
Sbjct: 136 KVNLTIKQGSPSAIAQMVSSGEADLAIITERIDDHPELGKLPCYEWNHAVIVPHDHPLLD 195
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL++++++PL+TY+ +F+ + R F+ + P + L ++D++KTYV L +
Sbjct: 196 CRNPLSLEDLASFPLVTYEFAFNSGSSIARTFNKAHIEQPDVALSAADTDVLKTYVRLGL 255
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D D++L+ I A+HLF + + + ++ TYLR Y Y FI++ +PKL R+
Sbjct: 256 GVGLMAKMAYDPIVDQDLQLIDAAHLFEPSPTWIALRTDTYLRGYAYDFIQMFAPKLTRE 315
Query: 299 FINKIL 304
+++IL
Sbjct: 316 VVDRIL 321
>gi|50085670|ref|YP_047180.1| CysB family transcriptional regulator [Acinetobacter sp. ADP1]
gi|49531646|emb|CAG69358.1| transcriptional regulator cysteine biosynthesis (LysR family)
[Acinetobacter sp. ADP1]
Length = 307
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQ++L +E ++ + E +K++ +F+ D G LTIATTHTQARY LP I+ +F FP
Sbjct: 61 EPGQSLLGIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ +ADI I TE L+ + L SIP YQWE+ II P +HPL
Sbjct: 121 KVHLILQQASPTEISEMLLQGEADIGIATESLTTEENLASIPYYQWEHSIITPQNHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L+ +++YP+ITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 VPEITLETLAHYPIITYHGGFTGRSKIDKAFDDAGIDVDIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D RD L I +FG + + +++G LR Y Y FI L SP+ N K +
Sbjct: 241 GIVNDVAYDKERDYRLNQIKTG-IFGLNTTWIAVRKGHLLRGYGYEFISLCSPEANIKEL 299
Query: 301 NKI 303
KI
Sbjct: 300 KKI 302
>gi|261380049|ref|ZP_05984622.1| HTH-type transcriptional regulator CysB [Neisseria subflava NJ9703]
gi|284797258|gb|EFC52605.1| HTH-type transcriptional regulator CysB [Neisseria subflava NJ9703]
Length = 316
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 217/306 (70%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LTIATTHTQARYALPKI+ EF +P
Sbjct: 61 QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPKIVAEFVKIYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + +AD+AI+TE + +L +PCY+W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPSAIAQMVSSGEADLAIITERIDDHPELGKLPCYEWNHAVIVPHDHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL++++++PL+TY+ +F+ + R F+ + P + L ++D++KTYV L +
Sbjct: 181 CRNPLSLEDLASFPLVTYEFAFNSGSSIARTFNKAHIEQPDVALSAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D D++L+ I A+HLF + + + ++ TYLR Y Y FI++ +PKL R+
Sbjct: 241 GVGLMAKMAYDPAVDQDLQLIDAAHLFEPSPTWIALRTDTYLRGYAYDFIQMFAPKLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 VVDRIL 306
>gi|225075467|ref|ZP_03718666.1| hypothetical protein NEIFLAOT_00472 [Neisseria flavescens
NRL30031/H210]
gi|224953285|gb|EEG34494.1| hypothetical protein NEIFLAOT_00472 [Neisseria flavescens
NRL30031/H210]
Length = 316
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 216/306 (70%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LTIATTHTQARYALPKI+ EF P
Sbjct: 61 QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPKIVAEFVKNHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + +AD+AI+TE + +L +PCY+W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPSAIAQMVSSGEADLAIITERIDDHPELGKLPCYEWNHAVIVPHDHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL++++++PL+TY+ +F+ + R F+ + P + L ++D++KTYV L +
Sbjct: 181 CRNPVSLEDLASFPLVTYEFAFNSGSSIARTFNKAHIEQPDVALSAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D D++L+ I A+HLF + + + ++ TYLR Y Y FI++ +PKL R+
Sbjct: 241 GVGLMAKMAYDPVVDQDLQLIDAAHLFEPSPTWIALRTDTYLRGYAYDFIQMFAPKLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 VVDRIL 306
>gi|389721509|ref|ZP_10188261.1| transcriptional regulator CysB-like protein [Acinetobacter sp. HA]
gi|388608805|gb|EIM38001.1| transcriptional regulator CysB-like protein [Acinetobacter sp. HA]
Length = 307
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F +FP
Sbjct: 61 EPGQALLGIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +ITEM+ +ADI I TE L+ D L S+P Y W++ II P +HPL
Sbjct: 121 KVHLILQQASPVEITEMLLQGEADIGIATEALTTEDNLASVPYYNWQHSIITPQNHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++I +++++NYP+ITY F+GR K+D F IV+ +++D+IKTYVEL MG+
Sbjct: 181 KDNIRIEDLANYPIITYHGGFTGRSKIDTAFEEAGFDVDIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D RD L+ I + +FG + + +++G LR Y Y FI L SP + + +
Sbjct: 241 GIVNDVAYDPERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIRAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|319639246|ref|ZP_07993997.1| transcriptional regulator [Neisseria mucosa C102]
gi|317399430|gb|EFV80100.1| transcriptional regulator [Neisseria mucosa C102]
Length = 316
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 216/306 (70%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LTIATTHTQARYALPKI+ EF +P
Sbjct: 61 QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPKIVAEFVKNYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + +AD+AI+TE + +L +PCY+W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPSAIAQMVSSGEADLAIITERIDDHPELGKLPCYEWNHAVIVPHDHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL++++++PL+TY+ +F+ + R F+ + P + L ++D++KTYV L +
Sbjct: 181 CRNPLSLEDLASFPLVTYEFAFNSGSSIARTFNKAHIEQPDVALSAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D D++L+ I A+HLF + + + ++ TYLR Y Y FI++ +PKL R+
Sbjct: 241 GVGLMAKMAYDPVVDQDLQLIDAAHLFEPSPTWIALRTDTYLRGYAYDFIQMFAPKLTRE 300
Query: 299 FINKIL 304
++ IL
Sbjct: 301 VVDCIL 306
>gi|398833280|ref|ZP_10591416.1| transcriptional regulator [Herbaspirillum sp. YR522]
gi|398221791|gb|EJN08188.1| transcriptional regulator [Herbaspirillum sp. YR522]
Length = 311
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 208/305 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R FNLTE A L+TSQPGVS+ I ELEEEL ++IF R+GKR+ GLT
Sbjct: 1 MNFQQLRSIREAARCGFNLTEVANVLFTSQPGVSRQIRELEEELGVEIFERNGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ IL +E ++ E E L++ KE++ +G L+IATTHTQARY LP++++ F FP
Sbjct: 61 EPGKGILGIVERLLLEAENLRRASKEYAGEQSGTLSIATTHTQARYVLPRVVQAFRAAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+++L Q P+ I E + + +ADI I TE LS +L+S PCY W +VI+VP HPLL
Sbjct: 121 QVRIALQQSAPEHIAEWVISGKADIGIATEGLSQFKELVSFPCYTWSHVIVVPQGHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL ++ YPLITYD+ F+GR +D F + P IVL ++SD+I+ YV L +G+
Sbjct: 181 REQVSLADLGAYPLITYDVGFTGRGHIDEAFRQAGIEPDIVLTAMDSDVIQQYVGLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A D + L+SI A+HLF I+R+ +++G YLR+Y + FI+ +P+L R I
Sbjct: 241 GLVASMAVDQGKHMELQSIGAAHLFKPNIARLAVRRGAYLRAYTFDFIQQFAPELTRADI 300
Query: 301 NKILN 305
LN
Sbjct: 301 VNALN 305
>gi|262368578|ref|ZP_06061907.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
johnsonii SH046]
gi|262316256|gb|EEY97294.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
johnsonii SH046]
Length = 307
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 206/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F +FP
Sbjct: 61 EPGQALLGIVERMLVDADNIKRLADDFNRVDEGTLTIATTHTQARYVLPPIVNQFKKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +ITEM+ +ADI I TE L+ D L S+P Y W++ II P +HPL
Sbjct: 121 KVHLILQQASPVEITEMLLQGEADIGIATESLTTEDNLASVPFYNWQHSIITPQNHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS+ +++ YPLITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 KQNISIADLAEYPLITYHGGFTGRSKIDKAFEDAGVDVDIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D RD L+ I + +FG + + +++G LR Y Y FI L +P + K +
Sbjct: 241 GIVNNVAYDVERDYRLKQIP-TDIFGLNTTWIAVRKGHLLRGYGYEFISLCAPNADIKAL 299
Query: 301 NKI 303
+I
Sbjct: 300 KRI 302
>gi|288576049|ref|ZP_05978092.2| cys regulon transcriptional activator CysB [Neisseria mucosa ATCC
25996]
gi|288566471|gb|EFC88031.1| cys regulon transcriptional activator CysB [Neisseria mucosa ATCC
25996]
Length = 337
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 217/306 (70%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA+AL+TSQPG+SK I LEEEL + IFIR GKR+ ++
Sbjct: 22 MKLQQLRYALEVYRHNLNVSEAAEALFTSQPGISKQIRLLEEELGVQIFIRSGKRVVSVS 81
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L + I+++++ +K IG EF+ +D+G+L +ATTHTQARYALP I+ EF ++P
Sbjct: 82 QPGKAVLEIADRILRDVQNIKNIGSEFTEHDSGSLVVATTHTQARYALPLIVAEFVKRYP 141
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ N +ADIAIVTE + +L + CY+W + +IVP +HPLL
Sbjct: 142 KVTLTIKQGSPAAIAQMVSNGEADIAIVTERIDEHPELGKLTCYEWNHAVIVPHEHPLLD 201
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +S+++++++PLITY+ +F+ + R F+ +L P +VL ++D++KTYV L +
Sbjct: 202 CKNPLSIEDLASFPLITYEFAFNQGSSIARAFNKARLEQPDVVLSAADTDVLKTYVRLGL 261
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D D +L + ASHLF ++ + + +++ TYLR Y Y FI+L +PKL R+
Sbjct: 262 GVGLMAKMAYDPENDTDLELVDASHLFESSPTWIAVRKDTYLRGYAYDFIELFAPKLTRE 321
Query: 299 FINKIL 304
+++ L
Sbjct: 322 MVDRTL 327
>gi|407007880|gb|EKE23414.1| hypothetical protein ACD_6C00483G0002 [uncultured bacterium]
Length = 307
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 203/303 (66%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F +FP
Sbjct: 61 EPGQALLGIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVSQFKKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +ITEM+ QADI I TE L+ D L S+P Y W++ II P +HPL
Sbjct: 121 KVHLILQQASPVEITEMLLQGQADIGIATEALTTEDNLASVPYYNWQHSIITPQNHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++++YP+ITY F+GR K+D F IV+ +++D+IKTYVE+ MGI
Sbjct: 181 KEHVLIEDLAHYPIITYHGGFTGRSKIDTAFEEAGFDVDIVMSALDADVIKTYVEMNMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDPERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|288942144|ref|YP_003444384.1| LysR family transcriptional regulator [Allochromatium vinosum DSM
180]
gi|288897516|gb|ADC63352.1| transcriptional regulator, LysR family [Allochromatium vinosum DSM
180]
Length = 310
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL Q R VRE R+ FNLTE A AL+T+Q GVSK I +LE+EL +++F R GKR+ GLT
Sbjct: 1 MNLQQLRIVRETARRQFNLTEVANALFTAQSGVSKHIKDLEDELGVELFARRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E I+ +++ +K++G++F+ DTG+L IATTHTQARYALP ++ F FP
Sbjct: 61 APGRELLPIVERILLDLQNIKRLGEQFAQQDTGHLAIATTHTQARYALPPVVTRFKSHFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L Q P +I E +R+ +ADI I TE L+ L+S P Y+W + +IVP HPL +
Sbjct: 121 RVHLELHQCGPGEIVERLRSGEADIGIATEALADEPDLVSFPFYEWRHALIVPEGHPLTV 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I+ YPLITY ++GR ++D F+ L P IV+ +++D+IK YVEL +G+
Sbjct: 181 AGPLTLETIAEYPLITYHPGYTGRARIDAAFARAGLVPEIVMSALDADVIKAYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A+ RD LR I LF T +R+ +++G YLR Y SFI+ +P+L I
Sbjct: 241 GLIAAMAWHPARDAGLRLIELPDLFETNTARLGLRRGRYLRDYALSFIRACAPELTADRI 300
Query: 301 NK 302
+
Sbjct: 301 RE 302
>gi|262375543|ref|ZP_06068776.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
lwoffii SH145]
gi|262309797|gb|EEY90927.1| transcriptional regulator cysteine biosynthesis [Acinetobacter
lwoffii SH145]
Length = 307
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 202/303 (66%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F +FP
Sbjct: 61 EPGQALLGIVERMLVDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVSQFKKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +ITEM+ QADI I TE L+ D L S+P Y W++ II P +HPL
Sbjct: 121 KVHLILQQASPVEITEMLLQGQADIGIATEALTTEDNLASVPYYNWQHSIITPQNHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ + ++++YP+ITY F+GR K+D F IV+ +++D+IKTYVE+ MG+
Sbjct: 181 KEHVLIADLAHYPIITYHGGFTGRSKIDTAFEEAGFDVDIVMSALDADVIKTYVEMNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ +A+D RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNDVAYDPERDYRLKQIK-TDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
K+
Sbjct: 300 KKV 302
>gi|381195709|ref|ZP_09903051.1| transcriptional regulator CysB-like protein [Acinetobacter lwoffii
WJ10621]
Length = 307
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 205/303 (67%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQNFNLTEA+ ALYTSQ GVSK I +LE+EL + +FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFIRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ +F +FP
Sbjct: 61 EPGQALLGIVERMLVDADNIKRLADDFNRVDEGTLTIATTHTQARYVLPPIVNQFKKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +ITEM+ +ADI I TE L+ D L S+P Y W++ II P HPL
Sbjct: 121 KVHLILQQASPVEITEMLLQGEADIGIATESLTTEDNLASVPFYNWQHSIITPQSHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS+ +++ YPLITY F+GR K+D+ F + IV+ +++D+IKTYVEL MG+
Sbjct: 181 KQNISIVDLAEYPLITYHGGFTGRSKIDKAFEDAGVDFDIVMSALDADVIKTYVELNMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+ ++A+D RD L+ I + +FG + + +++G LR Y Y FI L SP + K +
Sbjct: 241 GIVNNVAYDVERDYRLKQIP-TDIFGLNTTWIAVRKGHLLRGYGYEFISLCSPDADIKAL 299
Query: 301 NKI 303
++
Sbjct: 300 KRV 302
>gi|34497282|ref|NP_901497.1| transcriptional regulator CysB-like protein [Chromobacterium
violaceum ATCC 12472]
gi|34103138|gb|AAQ59501.1| transcriptional regulator [Chromobacterium violaceum ATCC 12472]
Length = 309
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 205/305 (67%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQ FNLTE A AL+TSQ GVSK I +LE+EL +++FIR GKR GLT
Sbjct: 1 MNFQQLRIIRETVRQGFNLTEVANALFTSQSGVSKHIKDLEDELGVELFIRKGKRFLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L +E ++ + +K++ ++FS D G LTIATTHTQARYALP+++ EF FP
Sbjct: 61 DPGKELLIIVERMLLDAGNIKRLAQQFSLRDEGQLTIATTHTQARYALPQVVTEFKRAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L Q +P+++ ++ ADI I TE ++ +L+S P Y W + +I P +HP L
Sbjct: 121 RVHLVLHQASPEELVRLLLAGDADIGIATEAVTEVPELVSFPYYSWHHCVIAPPEHP-LH 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ +P++TY F+GR K+D F+ L P IV+ +++D+IKTYVEL +G+
Sbjct: 180 REPLTLEALAEHPIVTYHHGFTGRAKIDNTFAEAGLAPDIVMAALDADVIKTYVELELGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A D RD ++ + LFG SR+ I++G YLRSY Y FI+L +P LN + +
Sbjct: 240 GIVASMAVDPRRDAGVKVVEGPPLFGQQTSRIAIRRGHYLRSYAYRFIELCAPALNEQSV 299
Query: 301 NKILN 305
+ L+
Sbjct: 300 RQALS 304
>gi|348589888|ref|YP_004874350.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Taylorella asinigenitalis MCE3]
gi|347973792|gb|AEP36327.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Taylorella asinigenitalis MCE3]
Length = 314
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ QF+++ E V NFNL++AAK L+TSQPG+SKAIIE EEEL IF R+GKR+RGLT
Sbjct: 1 MNIQQFKYILETVSNNFNLSDAAKKLHTSQPGISKAIIEFEEELGFQIFERNGKRLRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG+A++ I ++ E+E LK+I E+ +D G L I THTQARY LP+II +F ++P
Sbjct: 61 KPGKAVVAVIRRLLLEVENLKRISDEYVNHDEGVLVIGCTHTQARYFLPQIILDFKQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++SL++ +P Q+ M+ ND+ DIA TE L+ ++ PCY WE+ +++ DH L
Sbjct: 121 GVQVSLIESSPPQLANMLLNDELDIAFATETLAQVPGVVIFPCYDWEHYLVMREDHELSN 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
+ S +SL++I+ YPLITY F+GR +D F + IVLE I++D+IKTYV+
Sbjct: 181 MTSTQAKNLSLQDIACYPLITYSRQFTGRPAIDASFEAADIKHNIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +G+GIIAS+A+D RD+ L + HLFG S++ +++G + R YV+ FI++ +P
Sbjct: 241 VGLGLGIIASMAYDPRRDRGLIGLPVGHLFGYHTSKIGLRKGVFARDYVFEFIQMCAPGE 300
Query: 296 NRKFI 300
N+K I
Sbjct: 301 NKKSI 305
>gi|254492128|ref|ZP_05105303.1| LysR substrate binding domain protein [Methylophaga thiooxidans
DMS010]
gi|224462680|gb|EEF78954.1| LysR substrate binding domain protein [Methylophaga thiooxydans
DMS010]
Length = 306
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 211/306 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q ++VRE R+ +++ AA AL+ SQPGVS + +LEEEL + IF RHGKR+ G+T
Sbjct: 1 MKIQQLKYVREVARRGLSISAAANALFASQPGVSNQVQQLEEELGLQIFERHGKRLTGIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G++++ E ++Q+++ ++++ + + TG L+I TTHTQARYALP IK F+ Q+P
Sbjct: 61 PVGKSVIAMAERVLQDVDNIRQLAADSRSEQTGTLSIGTTHTQARYALPPAIKTFSEQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+++QG P ++ EM Q DIAI TE LS ++L +PCY+W ++VP +HPLL
Sbjct: 121 HVHLNMVQGTPPEVAEMAATGQVDIAIATEGLSQFEQLAVLPCYEWNRCVVVPPEHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I++YP++TY + F+GR + D+ F + L P +V ++D+IKTYVEL +GI
Sbjct: 181 EGKLTLEAIADYPILTYVMGFTGRAQQDQSFLERGLHPNVVFTATDADVIKTYVELELGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD +D L++I ASHLF +++ + I++G+YLR Y+Y+FI+ + L++ +
Sbjct: 241 GIIASMAFDPVKDAPLKAIDASHLFNPSVTHMGIRKGSYLRGYMYAFIEYFAAHLDKATV 300
Query: 301 NKILNN 306
+ ++
Sbjct: 301 ERAIDQ 306
>gi|71908523|ref|YP_286110.1| transcriptional regulator CysB-like protein [Dechloromonas
aromatica RCB]
gi|71848144|gb|AAZ47640.1| transcriptional regulator, LysR family [Dechloromonas aromatica
RCB]
Length = 313
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 206/306 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E RQ N++EAA++LYTSQPG+SK + LE+EL + IF R GKR G+T
Sbjct: 1 MKLQQLRYIVEIQRQGLNVSEAAESLYTSQPGISKQVKLLEDELGVSIFERSGKRFTGVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I++E E LK+ EF++ +TG L +A THTQARYALP ++++F Q P
Sbjct: 61 EPGKVVLGIAERILREAENLKRASGEFASGNTGRLVLAATHTQARYALPIVVRDFMAQHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL + QG+P QI E + +ADI I TE L +LI++P QW + +I P HP+L
Sbjct: 121 DVKLEMHQGSPTQIAEWVVAGEADIGIATEALDQYPQLITLPVRQWTHCVIAPEGHPILQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL E++ +PLITYD +F+GR +++R F + P + L +++D+IKTYV L +G+
Sbjct: 181 SVPLSLNELARWPLITYDTAFTGRSRINRAFERINVQPNVALTALDADVIKTYVSLGLGL 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GII+++AFD+ RD L +I A+HLF + +R+ +++GTYLR Y Y I L +P+L++ +
Sbjct: 241 GIISALAFDAQRDAGLVAIDAAHLFESNTTRLALRRGTYLRRYDYDLITLFAPQLSKHVV 300
Query: 301 NKILNN 306
+
Sbjct: 301 EMAMQG 306
>gi|399116570|emb|CCG19377.1| putative LysR-family transcriptional regulator [Taylorella
asinigenitalis 14/45]
Length = 314
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ QF+++ E V NFNL++AAK L+TSQPG+SKAIIE EEEL IF R+GKR+RGLT
Sbjct: 1 MNIQQFKYILETVSNNFNLSDAAKKLHTSQPGISKAIIEFEEELGFQIFERNGKRLRGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
KPG+A++ I ++ E+E LK+I E+ +D G L I THTQARY LP+II +F ++P
Sbjct: 61 KPGKAVVAVIRRLLLEVENLKRISDEYVNHDEGVLVIGCTHTQARYYLPQIILDFKQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++SL++ +P Q+ M+ ND+ D+A TE L+ ++ PCY WE+ +++ DH L
Sbjct: 121 GVQVSLIESSPPQLANMLLNDELDVAFATETLAQVPGVVIFPCYDWEHYLVMREDHELSN 180
Query: 181 LNS-----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVE 235
+ S +SL++I+ YPLITY F+GR +D F + IVLE I++D+IKTYV+
Sbjct: 181 MTSTQAKNLSLQDIARYPLITYSRQFTGRPAIDASFEAADIKHNIVLEAIDADVIKTYVD 240
Query: 236 LRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
+ +G+GIIAS+A+D RD+ L + HLFG S++ +++G + R YV+ FI++ +P
Sbjct: 241 VGLGLGIIASMAYDPRRDRGLIGLPVGHLFGYHTSKIGLRKGVFARDYVFEFIQMCAPGE 300
Query: 296 NRKFI 300
N+K I
Sbjct: 301 NKKSI 305
>gi|350570860|ref|ZP_08939204.1| Cys regulon transcriptional activator CysB [Neisseria wadsworthii
9715]
gi|349794380|gb|EGZ48196.1| Cys regulon transcriptional activator CysB [Neisseria wadsworthii
9715]
Length = 316
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 212/306 (69%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+V E RQN N++ AA AL+TSQPGVSK I LEEEL + IFIR GKRI ++
Sbjct: 1 MKLQQLRYVLEVYRQNLNVSAAADALFTSQPGVSKQIRLLEEELGVQIFIRSGKRIISVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+A+L E ++ ++ +K IGKEF+ +++G LTIATTHTQARY LP II EF ++P
Sbjct: 61 PPGKAVLVLAERVLHDVHNIKNIGKEFTDHNSGILTIATTHTQARYVLPSIIAEFVKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV+LS+ QG+P + +M+ + +AD AI TE L D+L SIPC +W + II+P HPLL
Sbjct: 121 KVQLSIKQGSPSALAQMVLSGEADFAITTESLDSLDELRSIPCSKWTHGIIIPDGHPLLN 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
+I L++++ YPLITY+ +F+ + F+ K+ P +VL ++D++KTYV+L +
Sbjct: 181 TAATIRLQDVAAYPLITYEFAFNSNSCISHAFNKAKIEHPNVVLAAADTDVLKTYVKLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GIGI+A +AFD + D+ L+ I ASHLF ++ + + ++ +YLR Y Y FI + SP L R+
Sbjct: 241 GIGIMAQMAFDPDNDQGLQMIDASHLFESSYTAITLRPDSYLRGYTYEFINMFSPGLTRE 300
Query: 299 FINKIL 304
I+K+L
Sbjct: 301 KIDKLL 306
>gi|255067166|ref|ZP_05319021.1| cys regulon transcriptional activator CysB [Neisseria sicca ATCC
29256]
gi|340361338|ref|ZP_08683767.1| Cys regulon transcriptional activator CysB [Neisseria macacae ATCC
33926]
gi|349608842|ref|ZP_08888259.1| hypothetical protein HMPREF1028_00234 [Neisseria sp. GT4A_CT1]
gi|419796576|ref|ZP_14322110.1| cys regulon transcriptional activator CysB [Neisseria sicca VK64]
gi|255048534|gb|EET43998.1| cys regulon transcriptional activator CysB [Neisseria sicca ATCC
29256]
gi|339888715|gb|EGQ78149.1| Cys regulon transcriptional activator CysB [Neisseria macacae ATCC
33926]
gi|348615801|gb|EGY65310.1| hypothetical protein HMPREF1028_00234 [Neisseria sp. GT4A_CT1]
gi|385699356|gb|EIG29659.1| cys regulon transcriptional activator CysB [Neisseria sicca VK64]
Length = 316
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 213/306 (69%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA AL+TSQPG+SK I LEEEL + IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGVQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G LTIATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGALTIATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
+V L++ QG+P I +M+ N +ADIAIVTE + +L + C +W + +IVP +HPLL
Sbjct: 121 RVNLTIKQGSPAAIAQMVSNGEADIAIVTERIDDHPELSKLTCDEWNHAVIVPKEHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
+N +S+++++++PLITY+ +F+ + R F+ L P +VL ++D++KTYV L +
Sbjct: 181 CMNPLSIEDLASFPLITYEFAFNQGSSIARAFNKAHLDNPDVVLSAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +AFD +D +L + A+HLF + + ++ TYLR Y Y FI++ SPKL R
Sbjct: 241 GVGLMAKMAFDPEKDADLELVDAAHLFEPSPIWIAVRSDTYLRGYTYDFIEMFSPKLTRD 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 VVDRIL 306
>gi|334130106|ref|ZP_08503909.1| HTH-type transcriptional regulator cysB [Methyloversatilis
universalis FAM5]
gi|333445142|gb|EGK73085.1| HTH-type transcriptional regulator cysB [Methyloversatilis
universalis FAM5]
Length = 310
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 203/304 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR+ FNLTE A AL+TSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRRQFNLTEVANALFTSQSGVSKHIKDLEDELGVELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG ++ +E ++ + +K++ ++F+ D G L IATTHTQARYALP+++ EF FP
Sbjct: 61 EPGSELVEIVERMLLDAGNIKRLAEQFARRDEGQLRIATTHTQARYALPRVVTEFKRLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L LLQ +P +I +++ + +ADI I TE L+ + L++ P + W + +IVP HPL
Sbjct: 121 KVHLVLLQASPGEIVDLLHDGEADIGIATETLADAPDLVTFPFHTWHHSVIVPAGHPLEA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ + +P++TY F+GR ++D F+ L P IV+ +++D+IKTYVEL +G
Sbjct: 181 VRPLTLEALVEHPVVTYHEGFTGRARIDATFARAGLLPDIVMSALDADVIKTYVELGLGA 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD RD LR + + HLF + + +++ YLRSY Y FI+L P LN +
Sbjct: 241 GIIASVAFDPARDSALRLLDSEHLFAANTTMIALRRKHYLRSYAYRFIELCEPSLNEVTV 300
Query: 301 NKIL 304
L
Sbjct: 301 KAAL 304
>gi|338737569|ref|YP_004674531.1| HTH-type transcriptional regulator cysB [Hyphomicrobium sp. MC1]
gi|337758132|emb|CCB63955.1| HTH-type transcriptional regulator cysB (Cys regulon
transcriptional activator) [Hyphomicrobium sp. MC1]
Length = 312
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 201/300 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE +R+NFNLTE A ALYTSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETLRRNFNLTEVANALYTSQSGVSKHIKDLEDELGVELFVRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + ++ I+ + +K++ +F+ D G +TIATTHTQARYALP I F +FP
Sbjct: 61 EPGKELAQIVDRILLDTANIKRLADQFAKSDRGEITIATTHTQARYALPGPIAAFRKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V + L QG PK+I M+ + ADI I TE L + + +S P Y W + +IVP HPL
Sbjct: 121 NVHMILQQGTPKEIAAMLSDGTADIGIATEALEDTPEHVSFPFYSWHHAVIVPKGHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +I+++P+ITY F+GR +D F+ L P IV+ +++D+IKTYVE+ +GI
Sbjct: 181 GAPLTLDKIADWPIITYHEGFTGRPAIDAAFASANLAPDIVMAALDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D RD L + +HLF + SR+ +++G +LR + Y FI+L +P L K +
Sbjct: 241 GIVASMAYDEQRDTGLTLLDTTHLFPQSTSRIALRRGRFLRGFAYRFIELCAPALTEKIV 300
>gi|302879130|ref|YP_003847694.1| transcriptional regulator, LysR family [Gallionella
capsiferriformans ES-2]
gi|302581919|gb|ADL55930.1| transcriptional regulator, LysR family [Gallionella
capsiferriformans ES-2]
Length = 310
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 203/300 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR N+NLTE AL+TSQ GVSK I +LE+EL +++F+R GKR+ LT
Sbjct: 1 MNFQQLRIIREAVRCNYNLTEVGSALFTSQSGVSKHIKDLEDELGVELFVRKGKRLLDLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +L+ +E I+ + +K + +++S D G LT+ THTQARYALPK+I +F +P
Sbjct: 61 DPGRELLQIVERILLDANNIKNMVEQYSQRDEGQLTVVATHTQARYALPKVITDFKKTYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I M+ + +ADI + TE L+ KL S P Y W + +IVP+ HPL
Sbjct: 121 KVHLKLHQASPNEIVTMLLSGEADIGMATEALADVTKLDSFPFYTWHHAVIVPVGHPLEQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YP++TY +GR K+D+ F +TP I + ++SD+IKTYVEL +GI
Sbjct: 181 VKPLTLQALAEYPIVTYHEGLTGRAKIDQAFLDAGVTPDISMSALDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AF+ +D +LR + HLFG + + +++G YLRS+ Y FI+L SPKL+ I
Sbjct: 241 GIIASMAFNPAKDSDLRLLQCEHLFGVNTTYIALRRGHYLRSFAYRFIELCSPKLDEAVI 300
>gi|392953560|ref|ZP_10319114.1| transcriptional regulator CysB [Hydrocarboniphaga effusa AP103]
gi|391859075|gb|EIT69604.1| transcriptional regulator CysB [Hydrocarboniphaga effusa AP103]
Length = 330
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 202/303 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q ++ E R+ N+T AA ALYTSQPGVSK I LEEEL +DIF+R+GK + +T
Sbjct: 5 VKLRQLSYIHEVSRRGLNVTAAADALYTSQPGVSKQIRMLEEELGVDIFVRNGKHLSEVT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ IL + ++ E+E ++ I +EF D G+L+IATTHTQARYALP +I+ F +FP
Sbjct: 65 PAGKRILEYTDRLLNEVENIRNIAEEFRDTDRGDLSIATTHTQARYALPPVIQRFKGRFP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI +M QAD AI TE L ++L+ +PCY W +++ DHPL
Sbjct: 125 RVSLHLHQGSPPQIAKMAAEGQADFAIATEALEHFEQLVMLPCYHWNRCVLIKPDHPLAQ 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++LKE++ +P+ITY F+GR KLD+ F+ L P +VL +++D+IKTYV L +G+
Sbjct: 185 VSRLTLKELAEFPIITYTFGFTGRSKLDQAFAASGLRPDVVLTAVDADVIKTYVRLGLGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A+D D +L + A HLF + + + ++G +LR ++Y F++ +P L R+ +
Sbjct: 245 GIIADMAYDEKTDADLVCLKADHLFEQSTTHIGFRRGLFLRGFMYEFMQTFAPHLTRELV 304
Query: 301 NKI 303
+ +
Sbjct: 305 DSV 307
>gi|407696063|ref|YP_006820851.1| Cys regulon transcriptional activator, LysR family [Alcanivorax
dieselolei B5]
gi|407253401|gb|AFT70508.1| Cys regulon transcriptional activator, LysR family [Alcanivorax
dieselolei B5]
Length = 324
Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 198/301 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A+ALYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQALYTSQPGISKQIRMLEDELGVEVFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AILR I+Q+ E +K++ +EF G+L+IATTHTQARYALP +I++FT +FP
Sbjct: 61 PAGEAILRIAGDILQQTEAIKRVAQEFRDETKGDLSIATTHTQARYALPPVIQKFTQRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVSLHMNQGTPMQISEMAADGSVDFAIATEALDLFSDLVMMPCYRWNRTVVVPEGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L ++ YP++TY F+GR KLD F+ Q L P +V ++D+IKTYV L MG+
Sbjct: 181 IKPLTLDALAEYPIVTYVFGFTGRSKLDDAFARQGLEPKVVFTAADADVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D +DK L ++ A HLF + +R+ ++GT+LR ++Y FI+L +P L R I
Sbjct: 241 GIVAHMAVDPVQDKGLVNLEAGHLFEPSTTRIGFRKGTFLRGFMYEFIQLFAPHLTRDVI 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|417957418|ref|ZP_12600340.1| HTH-type transcriptional regulator CysB [Neisseria weaveri ATCC
51223]
gi|343968250|gb|EGV36481.1| HTH-type transcriptional regulator CysB [Neisseria weaveri ATCC
51223]
Length = 315
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 211/306 (68%), Gaps = 3/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA+AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAAEALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I ++++ +K IG++F+ D+G+LT+ATTHTQARY LPK++ EF +P
Sbjct: 61 QPGKAVLEIAERIFRDVQNIKNIGRDFTDQDSGSLTLATTHTQARYILPKVVAEFVKTYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KVKLS+ QG+P I ++++N +AD AI TE + +D L IPC++ Y +IVP DHP+L
Sbjct: 121 KVKLSIKQGSPSAIVQIVQNGEADFAIATESVGETD-LRKIPCHRSSYALIVPDDHPVLE 179
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL +I+++P +TY+ +F+ + R F L P I L ++D++KTYV L +
Sbjct: 180 FRNPLSLADIADFPAVTYEFAFNHGSSVARAFQKAGLPMPEIALSAADTDVLKTYVRLGL 239
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GIGII A+D+ D+ L I A HLF + + ++ GTYLR Y Y+FI+L +P+L+R+
Sbjct: 240 GIGIIEKAAYDAASDQGLHMIDAGHLFEPSPIYIALRAGTYLRGYSYNFIQLFAPQLSRE 299
Query: 299 FINKIL 304
I+KIL
Sbjct: 300 RIDKIL 305
>gi|358012494|ref|ZP_09144304.1| transcriptional regulator CysB-like protein [Acinetobacter sp.
P8-3-8]
Length = 309
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 206/305 (67%), Gaps = 3/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQN+NLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNYNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ F FP
Sbjct: 61 EPGQALLSIVERMLIDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNLFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ ADI I TE L+ D L S+P Y W++ II P DHPL
Sbjct: 121 KVHLILQQASPVEISEMLLLGLADIGIATESLTTEDNLGSVPFYNWKHSIITPQDHPLTK 180
Query: 181 LN--SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRM 238
++ I+L++++ YP+ITY F+GR K+D+ F L IV+ +++D+IKTYVEL M
Sbjct: 181 IDPKEITLEKLAEYPIITYHGGFTGRSKIDKAFEEAHLDVDIVMSALDADVIKTYVELGM 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+GI+ +A+D RD L+ I+ + +FG + + +++G LR Y Y FI L SP+ + K
Sbjct: 241 GVGIVNDVAYDLERDHRLKQIN-TDIFGLNTTWIAVRKGHLLRGYGYEFISLCSPEADIK 299
Query: 299 FINKI 303
+ KI
Sbjct: 300 ALKKI 304
>gi|386827225|ref|ZP_10114332.1| transcriptional regulator [Beggiatoa alba B18LD]
gi|386428109|gb|EIJ41937.1| transcriptional regulator [Beggiatoa alba B18LD]
Length = 325
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 203/306 (66%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRH-GKRIRGL 59
M L Q R++ E ++ N++ A+ LYTSQPGVSK I LEEEL + IF R GK++ +
Sbjct: 1 MKLQQLRYICEVAQRGLNVSATAEGLYTSQPGVSKQIKLLEEELGVQIFARKSGKQLTHI 60
Query: 60 TKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQF 119
T GQAI+ + I++++ +K+I EFS +G L+I TTHTQARYALP IIK+F ++
Sbjct: 61 TPAGQAIIHVAQDILRQVNNIKRISHEFSDNQSGTLSIGTTHTQARYALPPIIKQFIKKY 120
Query: 120 PKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL 179
PKV L + QG P QI+++ D AI TE L D L+ +PCY+W I+VP +HPL
Sbjct: 121 PKVVLHMHQGTPVQISQLAAEGTVDFAIATEALELFDNLVMMPCYRWNRGILVPPEHPLA 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++ SL +I+ YPL+TY F+GR +LD F+ L P +V ++D+IKTYV L +G
Sbjct: 181 KIDKPSLADIAQYPLVTYTFGFTGRSQLDHAFTAAGLEPQVVFTASDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +AFD + D++LR I ASHLF + +R+ ++GT+LRSY+Y F++L +P L R+
Sbjct: 241 VGIVAHMAFDPDLDEDLRMIDASHLFEPSTTRLGCRRGTFLRSYMYDFMQLFAPHLTRER 300
Query: 300 INKILN 305
+ K +
Sbjct: 301 VEKAME 306
>gi|94502032|ref|ZP_01308538.1| Transcriptional regulator [Oceanobacter sp. RED65]
gi|94425839|gb|EAT10841.1| Transcriptional regulator [Oceanobacter sp. RED65]
Length = 324
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 205/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A+ LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQVLYTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL+ I++++E +K++ +EFS + G+L +ATTHTQARYALP II+EF +FP
Sbjct: 61 PAGEAILKVSGEILRKVESIKQVAQEFSNENKGSLALATTHTQARYALPAIIQEFIKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE + + LI +PCY+W I+VP +HPL
Sbjct: 121 EVSLHMHQGTPTQIAEMAADGTVDFAIATEAMDHFNDLIMMPCYRWNRSILVPKNHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +L+E++ +PL+TY F+GR +LD F + LTP +V ++D+IKTYV L +G+
Sbjct: 181 RSQPTLEEVATFPLVTYVFGFTGRSRLDEAFKSKGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A+++ D +D +L +I ASHLF +++++ +++GT+LR ++Y F+K +P L+R I
Sbjct: 241 GIVATMSIDPEKDNDLVAIDASHLFEDSVTKIGLRKGTFLRGFMYDFVKRFAPHLDRATI 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|254428221|ref|ZP_05041928.1| LysR substrate binding domain protein [Alcanivorax sp. DG881]
gi|196194390|gb|EDX89349.1| LysR substrate binding domain protein [Alcanivorax sp. DG881]
Length = 324
Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A ALYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAAALYTSQPGISKQIRMLEDELGVEVFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQAIL+ I+Q+ E ++++ +EF G L+IATTHTQARYALP +I +FT FP
Sbjct: 61 PAGQAILQIAGEILQQTESIRRVSQEFRDESRGELSIATTHTQARYALPPVIHQFTGLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM N D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGSVDFAIATEALDLFSDLIMMPCYRWNRTVVVPEGHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ ++ YPL+TY F+GR KLD F + L P +V ++D+IKTYV L MG+
Sbjct: 181 VHPLTLEALAEYPLVTYVFGFTGRSKLDDAFVDKGLDPKVVFTAADADVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A D+ DK L ++ ASHLF ++ +R+ ++GT+LR ++Y F++ +P L+R+ +
Sbjct: 241 GIIAHMAVDAVEDKGLVALDASHLFESSTTRIGFRKGTFLRGFMYDFLEAFAPHLSRELV 300
Query: 301 NKILN 305
+
Sbjct: 301 EAAIK 305
>gi|82702862|ref|YP_412428.1| transcriptional regulator CysB-like protein [Nitrosospira
multiformis ATCC 25196]
gi|82410927|gb|ABB75036.1| transcriptional regulator, LysR family [Nitrosospira multiformis
ATCC 25196]
Length = 314
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 200/300 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R + E VRQN+NLTEAA AL+TSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIHETVRQNYNLTEAANALFTSQSGVSKHIKDLEDELGVELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ ++ +E I+ + + +K++ ++FS D G LTIATTHTQA+YALP ++ +F FP
Sbjct: 61 NPGKELIEIVERILLDAKNVKRLAEQFSKRDKGRLTIATTHTQAQYALPTVVTQFKKTFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L Q +P +I M+ + ADI I TE L +L S P Y W + +IVP HPL
Sbjct: 121 QVHLVLHQASPGEIVSMLLDGVADIGIATEALESVAELASFPYYSWHHAVIVPPGHPLEA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +P+ITY F+GR +D+ F+ L I + +++D+IKTYVEL +G+
Sbjct: 181 IQPLTLEGIAEFPIITYHEGFTGRAGIDQTFAGAGLVLDIAMSALDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+AF+ RD L + +SHLFG I+ + I++G YLR Y Y FI+L P L I
Sbjct: 241 GLVASMAFNPVRDTRLTLLDSSHLFGQNITHISIRRGHYLRGYAYRFIELCLPSLTEAAI 300
>gi|89094318|ref|ZP_01167259.1| Cys regulon transcriptional activator [Neptuniibacter caesariensis]
gi|89081377|gb|EAR60608.1| Cys regulon transcriptional activator [Oceanospirillum sp. MED92]
Length = 324
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 203/305 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQAIL I+Q++E +K++ +EFS G+L +ATTHTQARYALP I F ++P
Sbjct: 61 PAGQAILSVAGEILQKVESIKQVAQEFSDERKGSLDVATTHTQARYALPPTITGFMKEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE ++ + LI +PCY+W ++VP DHPL
Sbjct: 121 DVSLHMHQGTPMQISEMAADGTVDFAIATEAMAHFNDLIMMPCYRWNRSVVVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L +++ P++TY F+GR KLD F+ + L P +V ++SD+IKTYV L +G+
Sbjct: 181 VSKLTLADLAEQPIVTYVFGFTGRSKLDEAFANEGLEPKVVFTAVDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA++AFD +D +L ++ ASHLF +I+++ ++GT+LR Y+Y FI+ +P L +
Sbjct: 241 GIIATMAFDEQQDSDLVALDASHLFEPSITKIGFRKGTFLRGYMYDFIQRFAPHLTPDVV 300
Query: 301 NKILN 305
++L
Sbjct: 301 RQVLE 305
>gi|345874943|ref|ZP_08826740.1| HTH-type transcriptional regulator CysB [Neisseria weaveri LMG
5135]
gi|343969663|gb|EGV37872.1| HTH-type transcriptional regulator CysB [Neisseria weaveri LMG
5135]
Length = 315
Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 209/306 (68%), Gaps = 3/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA+AL+TSQPG+SK I LEEEL I IFIR GKR+ ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAAEALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I ++++ +K IG++F+ D+G+LT+ATTHTQARY LPK++ EF +P
Sbjct: 61 QPGKAVLEIAERIFRDVQNIKNIGRDFTDQDSGSLTLATTHTQARYILPKVVAEFVKTYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KVKLS+ QG+P I ++++N +AD AI TE + +D L IPC+ Y +IVP DHP+L
Sbjct: 121 KVKLSIKQGSPSAIVQIVQNGEADFAIATESVGETD-LRKIPCHCSSYALIVPDDHPVLE 179
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N +SL +I+++P +TY+ +F+ + R F L P I L ++D++KTYV L +
Sbjct: 180 FRNPLSLADIADFPAVTYEFAFNHGSSVARAFQKAGLPMPEIALSAADTDVLKTYVRLGL 239
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GIGII A+D+ D+ L I A HLF + + ++ GTYLR Y Y FI+L +P+L+R+
Sbjct: 240 GIGIIEKAAYDAASDQGLHMIDAGHLFEPSPIYIALRAGTYLRGYSYDFIQLFAPQLSRE 299
Query: 299 FINKIL 304
I+KIL
Sbjct: 300 RIDKIL 305
>gi|254284154|ref|ZP_04959122.1| transcriptional regulator, LysR family [gamma proteobacterium
NOR51-B]
gi|219680357|gb|EED36706.1| transcriptional regulator, LysR family [gamma proteobacterium
NOR51-B]
Length = 324
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ IL I+++ + +K++ +EFS +GNL IATTHTQARYALP +I EF +FP
Sbjct: 61 PAGEVILELAGEILRKSQSIKRVAQEFSDETSGNLAIATTHTQARYALPSVIGEFIKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI +M + D AI TE L LI++PCY+W ++VP DHPL
Sbjct: 121 DVSLHMQQGTPTQIAQMAADGVVDFAIATEALGLMSDLITLPCYRWNRCVVVPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ +P++TY F+GR KLD FS + LTP +V +++D+IKTYV L +GI
Sbjct: 181 LDKLTLESVAEHPIVTYTFGFTGRSKLDEAFSSRDLTPKVVFTAVDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A+D D +L + A HLF ++++ + ++GT+LR Y+Y FI L+P L + +
Sbjct: 241 GIIAGMAYDERLDDDLVKLDAQHLFASSVTSLAFRKGTFLRGYMYDFISELAPHLTKDIV 300
Query: 301 NKILN 305
+ L
Sbjct: 301 SDALT 305
>gi|149375234|ref|ZP_01893006.1| Transcriptional regulator [Marinobacter algicola DG893]
gi|149360598|gb|EDM49050.1| Transcriptional regulator [Marinobacter algicola DG893]
Length = 325
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 202/306 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEVFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ +EG+KKI +EFS G+L+IATTHTQARYALP II+ F +P
Sbjct: 61 PGGEIIIREAGEILRRVEGIKKIAQEFSNQRKGDLSIATTHTQARYALPPIIQGFIESYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+EM N D AI TE + + LI +PCY+W IIVP DHPL
Sbjct: 121 EVSLHMHQGTPMQISEMAANGAVDFAIATEAMELFNDLIMMPCYKWNRSIIVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L +++ +PL+TY F+GR KLD F LTP +V ++D+IKTYV L +G+
Sbjct: 181 KSELTLPDLAEFPLVTYVFGFTGRSKLDEAFQAHGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD D +L + AS LF +++R+ ++GT+LR Y+Y FI+ +P L R+ +
Sbjct: 241 GIIASMAFDEQNDPDLVCLDASKLFRPSVTRIGFRKGTFLRGYMYDFIQRFAPHLTRERV 300
Query: 301 NKILNN 306
++ + +
Sbjct: 301 DEAVTH 306
>gi|313667782|ref|YP_004048066.1| transcriptional regulator [Neisseria lactamica 020-06]
gi|421863441|ref|ZP_16295138.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379031|emb|CBX22333.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005244|emb|CBN86677.1| transcriptional regulator [Neisseria lactamica 020-06]
Length = 316
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 213/306 (69%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIRIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKAVLDIAERILRDVQNIKNIGSEFTGHDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M + +AD+AIVTE + +L +PCY+W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPSAIVRMAASGEADLAIVTERIDDGPELAGLPCYEWTHAVIVPGDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
N + +++++ +PL+TY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLVTYEFAFNAGSSIARAFAKARLERPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|403053007|ref|ZP_10907491.1| transcriptional regulator CysB-like protein [Acinetobacter
bereziniae LMG 1003]
gi|445413221|ref|ZP_21433565.1| cys regulon transcriptional regulator Cbl [Acinetobacter sp.
WC-743]
gi|444766015|gb|ELW90292.1| cys regulon transcriptional regulator Cbl [Acinetobacter sp.
WC-743]
Length = 309
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 205/305 (67%), Gaps = 3/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQN+NLTEA+ ALYTSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRQNYNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PGQA+L +E ++ + + +K++ +F+ D G LTIATTHTQARY LP I+ F FP
Sbjct: 61 EPGQALLSIVERMLIDADNIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNLFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P +I+EM+ ADI I TE L+ + L S+ Y W++ II P DHPL
Sbjct: 121 KVHLILQQASPVEISEMLLLGLADIGIATESLTTEENLGSVSFYNWKHSIITPQDHPLTK 180
Query: 181 LN--SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRM 238
LN I+L++++ YP+ITY F+GR K+D+ F L IV+ +++D+IKTYVEL M
Sbjct: 181 LNPKDITLEKLAEYPIITYHGGFTGRSKIDKAFEDANLDVDIVMSALDADVIKTYVELGM 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+GI+ +A+D+ RD L+ I + +FG + + +++G LR Y Y FI L SP+ + K
Sbjct: 241 GVGIVNDVAYDTERDHRLKQID-TDIFGLNTTWIAVRKGHLLRGYGYEFISLCSPEADIK 299
Query: 299 FINKI 303
+ KI
Sbjct: 300 ALKKI 304
>gi|269214859|ref|ZP_06158873.1| HTH-type transcriptional regulator CysB [Neisseria lactamica ATCC
23970]
gi|269208840|gb|EEZ75295.1| HTH-type transcriptional regulator CysB [Neisseria lactamica ATCC
23970]
Length = 328
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 213/306 (69%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 13 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIRIFIRSGKRVVSVS 72
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ +D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 73 QPGKAVLDIAERILRDVQNIKNIGSEFTGHDSGSLTVATTHTQARYALPLIVADFVKRYP 132
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M + +AD+AIVTE + +L +PCY+W + +IVP DHPLL
Sbjct: 133 KVNLTIKQGSPSAIVRMTASGEADLAIVTERIDDGPELAGLPCYEWTHAVIVPGDHPLLE 192
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
N + +++++ +PL+TY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 193 CRNPLRIEDLARFPLVTYEFAFNAGSSIARAFAKARLERPDVALAAADTDVLKTYVRLGL 252
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 253 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 312
Query: 299 FINKIL 304
+++IL
Sbjct: 313 KVDRIL 318
>gi|358638252|dbj|BAL25549.1| transcriptional regulator CysB-like protein [Azoarcus sp. KH32C]
Length = 314
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 203/300 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR+NFNLTE A AL+TSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRRNFNLTEVANALFTSQSGVSKHIKDLEDELGVELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ ++ +E ++ + +K++ +++S D G LT+ TTHTQARYALPK++ F FP
Sbjct: 61 DPGKELVVMVERMLLDAGNIKRLAEQYSNRDEGRLTVVTTHTQARYALPKVVTAFKKAFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L QG+P++I M+ + QADI I TE ++ +L S P Y W + IIVP HPL
Sbjct: 121 KVYLKLHQGSPEEIVSMLLDGQADIGIATEAVAAVAELASFPYYTWHHSIIVPAGHPLEN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YPLITY F+GR +D+ F+ L+P +V+ +++D+IKTYVEL +G+
Sbjct: 181 VRPLTLEAVAEYPLITYHEGFTGRSNIDKSFAAAGLSPEVVMSAMDADVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AF R+ LR + + HLF + + +++G YLR + Y FI++ SP L I
Sbjct: 241 GIVASMAFQPEREGELRLLDSRHLFPVNTTSIAVRRGHYLRGFAYRFIEMCSPTLTEAAI 300
>gi|338997787|ref|ZP_08636475.1| transcriptional regulator CysB [Halomonas sp. TD01]
gi|338765314|gb|EGP20258.1| transcriptional regulator CysB [Halomonas sp. TD01]
Length = 324
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 205/305 (67%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVNRHNLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G +I+ +++ E +K++ +E S G+L+IATTHTQARYALP II EFT+++P
Sbjct: 61 PAGLSIIELAGQVLKLTENIKQVAQEHSDERRGSLSIATTHTQARYALPPIISEFTLKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG PKQI +M+ QAD AI TE L L+ +PCY+W ++VP DHPL L
Sbjct: 121 DVALHMQQGTPKQIAQMVSEGQADFAIATESLELFTDLVLLPCYRWNRCVLVPKDHPLAL 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+N ++L+ ++ +PL+TY F+GR +LD F Q LTP +VL ++D+IKTYV L MG
Sbjct: 181 INKPLTLQALAEHPLVTYVFGFTGRSQLDDAFKAQGLTPNVVLTAADADVIKTYVRLGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +A D D++L ++ ASHLF ++ +++ I++GT++R Y+Y F+ +P L R
Sbjct: 241 VGIVAHMAVDPVLDEDLVALDASHLFASSTTKIGIRRGTFMRGYMYDFLARFAPHLTRDL 300
Query: 300 INKIL 304
+++ L
Sbjct: 301 VDEAL 305
>gi|261378313|ref|ZP_05982886.1| HTH-type transcriptional regulator CysB [Neisseria cinerea ATCC
14685]
gi|269145410|gb|EEZ71828.1| HTH-type transcriptional regulator CysB [Neisseria cinerea ATCC
14685]
Length = 316
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 213/306 (69%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKAVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + ++D+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNTGSSIARAFAKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDDDLQLVDAAHLFEPSPTWIALRNDTYLRGYAYDFIQSFAPHLTRE 300
Query: 299 FINKIL 304
++KIL
Sbjct: 301 KVDKIL 306
>gi|358449046|ref|ZP_09159538.1| transcriptional regulator CysB [Marinobacter manganoxydans MnI7-9]
gi|385331595|ref|YP_005885546.1| LysR family transcriptional regulator [Marinobacter adhaerens HP15]
gi|311694745|gb|ADP97618.1| transcriptional regulator, LysR family [Marinobacter adhaerens
HP15]
gi|357226841|gb|EHJ05314.1| transcriptional regulator CysB [Marinobacter manganoxydans MnI7-9]
Length = 325
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/306 (43%), Positives = 202/306 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEVFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ +EG+KKI +EFS G+L+IATTHTQARYALP II F ++P
Sbjct: 61 PGGEIIIREAGEILRRVEGIKKIAQEFSNQRKGDLSIATTHTQARYALPPIISGFIEEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE + + LI +PCY+W +IVP DHPL
Sbjct: 121 DVSLHMHQGTPMQISEMAASGAVDFAIATEGMELFNDLIMMPCYKWNRSVIVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L E++ YPL+TY F+GR KLD F Q LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPELTLPELAEYPLVTYVFGFTGRSKLDEAFQSQGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+AFD D +L ++ A LF +++R+ ++GT+LR Y+Y FI +P L ++ +
Sbjct: 241 GIVASMAFDPKTDTDLVALDARKLFRPSVTRLGFRKGTFLRGYMYDFIHRFAPHLTKEKV 300
Query: 301 NKILNN 306
++ +++
Sbjct: 301 DEAVSH 306
>gi|145297671|ref|YP_001140512.1| transcriptional regulator CysB-like protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418358413|ref|ZP_12961090.1| transcriptional regulator CysB-like protein [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142850443|gb|ABO88764.1| transcriptional regulator, LysR-family [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356688449|gb|EHI53009.1| transcriptional regulator CysB-like protein [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 315
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 203/295 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+++NLTE A AL+TSQ GVS+ I ELEE+L I++FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREAARRDYNLTEVANALFTSQSGVSRHIRELEEDLGIELFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++K+ F+ ++G L +ATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILNDANNIRKLASTFANRESGRLLVATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG+P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 QVQLELRQGSPEEIVRLVQTGEVDIGISSERLDKSEGVVAFPYYRWHHNIVVPEQHPLTA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++++P+ITY +GR ++D F+ +TP I+L +SD+IKTYVEL MG+
Sbjct: 181 ERELTLAALAHWPIITYQAGLTGRARVDEAFAEAGITPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +AFD+ RD+ L + S LF + + +KQG + ++ + FI+L +P+L
Sbjct: 241 GILADMAFDTQRDRGLVQLDGSRLFAPHTAWIGLKQGQFQHNFAWQFIQLCNPEL 295
>gi|226939537|ref|YP_002794610.1| transcriptional regulator CysB-like protein [Laribacter
hongkongensis HLHK9]
gi|226714463|gb|ACO73601.1| CysB1 [Laribacter hongkongensis HLHK9]
Length = 312
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E RQ N++EAA+ L+TSQPG+SK I LE+EL + +FIR+GKR+ ++
Sbjct: 1 MKLQQLRYLVEVARQGLNVSEAAEKLHTSQPGISKQIRLLEDELGVQVFIRNGKRMVAVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L I++E LK++G+EF+ + G LTIATTHTQARYALP +K F ++P
Sbjct: 61 EPGRQVLDIASTILREARNLKRVGEEFAREEEGELTIATTHTQARYALPVAVKAFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM+ +AD AI TE ++ D+L+++ CYQW ++VPLDHPL
Sbjct: 121 EVTLRIKQGSPVQICEMVVAGEADFAIATEGITLFDELVALDCYQWNRSVVVPLDHPLTR 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L+ I+L +I+ +P+ITYD +F+GR K++ F L P VL I++D+IKTYV L +G
Sbjct: 181 LDRPITLADIAAWPIITYDFAFAGRNKINSAFEEAGLEPNFVLTAIDTDVIKTYVALGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
IGIIA++A++ +RD L I A HLF + +R+ +++ YLR Y Y FI+ +P L R
Sbjct: 241 IGIIATMAYEPDRDTQLDLIHAEHLFRPSTTRIGVRRDVYLRGYAYHFIEQFAPHLTRPV 300
Query: 300 INKILNN 306
+ + L N
Sbjct: 301 VEQALAN 307
>gi|121635481|ref|YP_975726.1| transcriptional regulator CysB-like protein [Neisseria meningitidis
FAM18]
gi|433493965|ref|ZP_20451040.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM762]
gi|120867187|emb|CAM10955.1| transcriptional regulator [Neisseria meningitidis FAM18]
gi|432231756|gb|ELK87414.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM762]
Length = 316
Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|152981629|ref|YP_001351947.1| cys regulon transcriptional activator [Janthinobacterium sp.
Marseille]
gi|151281706|gb|ABR90116.1| cys regulon transcriptional activator [Janthinobacterium sp.
Marseille]
Length = 304
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 193/296 (65%), Gaps = 1/296 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q RFVREA+R N NLTE A LYTSQ GVSK I +LE+EL ID+F+R GKR+ +T
Sbjct: 1 MNFQQLRFVREAIRNNLNLTEVAAVLYTSQSGVSKQIKDLEDELGIDLFVRSGKRLTSVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G + ++ I+ E E L++ ++S DTG L IA THTQARY LP+++++F +FP
Sbjct: 61 RAGDGAVEIVKRILLETENLRRYASQYSGVDTGQLIIAATHTQARYTLPRVVEQFNNEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL L QG P Q+ MI N +ADI I +E+L S +++ PC+ W + +IVPL HPL
Sbjct: 121 KVKLELHQGTPNQVAAMISNGEADIGIASEVLDQSPDILAYPCFSWNHQVIVPLGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L++I+ YPLITY+ F+GR +D FS L P L +++D+IKTYVE +G+
Sbjct: 181 KAPVTLEDIAQYPLITYNPQFTGRKCVDAAFSQAGLVPDFRLTAMDADVIKTYVERGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSI-SASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +A D L + + LFG+ + V ++ GT+L S+ Y F++ +P L
Sbjct: 241 GIVAEMALDGIEKIGLTVLETEGTLFGSCTTLVAVRNGTFLPSFAYRFLETFAPNL 296
>gi|388257425|ref|ZP_10134604.1| transcriptional regulator CysB [Cellvibrio sp. BR]
gi|387938592|gb|EIK45144.1| transcriptional regulator CysB [Cellvibrio sp. BR]
Length = 343
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 204/305 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 20 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRIT 79
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I++++E +K++ +EFS G LT+ATTHTQARYALP +I F Q+P
Sbjct: 80 PAGEAILKTAGEILRKVESIKQVAQEFSNERKGTLTLATTHTQARYALPPVIGSFIKQYP 139
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+EM + D AI TE + LI +PCY+W I+VP +HPL
Sbjct: 140 EVALHMHQGTPMQISEMAADGTVDFAIATEAMELFSDLIMMPCYRWNRSIVVPKNHPLAQ 199
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++L++++ YP++TY F+GR KLD F + L P +V ++D+IKTYV L +G+
Sbjct: 200 VANLTLEDVAKYPIVTYVFGFTGRSKLDEAFINRGLAPKVVFTAADADVIKTYVRLGLGV 259
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A++ D +L ++ ASHLF +++++ ++GT+LR ++Y FI+ +P L + I
Sbjct: 260 GIIASMAYNETTDTDLVALDASHLFEDSVTKIGFRRGTFLRGFMYDFIEKFAPHLTKDII 319
Query: 301 NKILN 305
N+ N
Sbjct: 320 NEAFN 324
>gi|329894869|ref|ZP_08270668.1| Regulatory protein CysB [gamma proteobacterium IMCC3088]
gi|328922598|gb|EGG29933.1| Regulatory protein CysB [gamma proteobacterium IMCC3088]
Length = 324
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 200/298 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLKYIWEVAHHDLNVSATAQSLFTSQPGISKQIRMLEDELGVEIFARSGKHLTEIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + ++Q +EG+K+ ++F+ G L++ATTHTQARY LP +IKEF ++P
Sbjct: 61 PAGKLIIEAAGEVLQRVEGIKQAARDFADNTRGTLSVATTHTQARYVLPMVIKEFMARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L++ QG P QI M + + D AI TE L D LI +PCY+W I+VP +HPL
Sbjct: 121 NVTLNMQQGTPAQIAAMASDGEVDFAIATEALELYDNLIMMPCYRWNRCILVPKEHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+E++ +P++TY F+GR KLD F Q LTP +V ++D+IKTYV L +GI
Sbjct: 181 VKRLTLEEVAQHPIVTYVFGFTGRSKLDSAFKRQNLTPQVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GI+A +A++ + D +L ++ A HLF ++++R+ ++GT++R Y+Y FI+L +P L ++
Sbjct: 241 GIVAHMAYNPSADSDLVALPAEHLFDSSVTRIGCRRGTFMRGYMYDFIELFAPHLTKE 298
>gi|120554503|ref|YP_958854.1| transcriptional regulator CysB [Marinobacter aquaeolei VT8]
gi|120324352|gb|ABM18667.1| transcriptional regulator, LysR family [Marinobacter aquaeolei VT8]
Length = 325
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 203/306 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEVFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ +EG+KKI +EFS G+L+IATTHTQARYALP +I+ F ++P
Sbjct: 61 PGGEIIIREAGEILRRVEGIKKIAQEFSNQRKGDLSIATTHTQARYALPPVIRGFIEEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM N D AI TE + + LI +PCY+W +IVP DHPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGAVDFAIATEGMDLFNDLIMMPCYKWNRCVIVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+E++ Y L+TY F+GR KLD F + LTP +V ++D+IKTYV L +G+
Sbjct: 181 GQELTLEELAEYSLVTYVFGFTGRSKLDEAFQSRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD D +L ++ AS LF +++R+ ++GT+LR Y+Y F++ +P L ++ +
Sbjct: 241 GIIASMAFDPKVDTDLVALDASKLFRPSVTRIGFRKGTFLRGYMYDFMERFAPHLTKQKV 300
Query: 301 NKILNN 306
++ + +
Sbjct: 301 DEAVAH 306
>gi|384082186|ref|ZP_09993361.1| transcriptional regulator CysB [gamma proteobacterium HIMB30]
Length = 325
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 199/307 (64%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LEEEL +++F R+GK + +T
Sbjct: 1 MKLQQLRYISEVANHDLNVSATAQSLFTSQPGISKQIRLLEEELGVEVFARNGKHLVSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +LR I+ +++ +K+I +EFS G L+IATTHTQARY LP II +F +P
Sbjct: 61 PAGEEVLRVASEILHKVDAIKQISQEFSDETKGVLSIATTHTQARYVLPPIINQFMRDYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L L+ +PCYQW +IVP DHPL
Sbjct: 121 EVSLQMQQGTPAQIAEMAAGGEVDFAIATEGLEYFSNLLLMPCYQWNRAVIVPKDHPLAQ 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L+ ++L E++ +P++TY F+GR +LD F + L+P +V ++D+IKTYV L +G
Sbjct: 181 LDGPLTLAELARHPIVTYVFGFTGRSRLDEAFEQEGLSPKVVFTAADADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +A D D +L ++ ASHLF +++ + ++GT+LR Y+Y F+ L +P L+R+
Sbjct: 241 VGIVADMAHDPQTDGDLVTVDASHLFSPSVTSIAFRRGTFLRGYMYRFVNLFAPHLSREL 300
Query: 300 INKILNN 306
I K L +
Sbjct: 301 IGKFLRS 307
>gi|387814118|ref|YP_005429601.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339131|emb|CCG95178.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 325
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 203/306 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEVFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ +EG+KKI +EFS G+L+IATTHTQARYALP +I+ F ++P
Sbjct: 61 PGGEIIIREAGEILRRVEGIKKIAQEFSNQRKGDLSIATTHTQARYALPPVIRGFIEEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM N D AI TE + + LI +PCY+W +IVP DHPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGAVDFAIATEGMDLFNDLIMMPCYKWNRCVIVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+E++ Y L+TY F+GR KLD F + LTP +V ++D+IKTYV L +G+
Sbjct: 181 GQELTLEELAEYSLVTYVFGFTGRSKLDEAFQSRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD D +L ++ AS LF +++R+ ++GT+LR Y+Y F++ +P L ++ +
Sbjct: 241 GIIASMAFDPKVDTDLVALDASKLFRPSVTRIGFRKGTFLRGYMYDFMERFAPHLTKEKV 300
Query: 301 NKILNN 306
++ + +
Sbjct: 301 DEAVAH 306
>gi|387126845|ref|YP_006295450.1| cys regulon transcriptional activator CysB [Methylophaga sp. JAM1]
gi|386273907|gb|AFI83805.1| Cys regulon transcriptional activator CysB [Methylophaga sp. JAM1]
Length = 306
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 201/304 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++VRE R+ +++ AA+ L+ SQPGVS I LE+EL + IF RHGKR+ +T
Sbjct: 1 MKLQQLKYVREVARRGLSISAAAQVLHASQPGVSNQIQLLEDELGLQIFERHGKRLSAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G++++ E ++QE++ L++ + G L+I TTHTQARYALPK IK F+ Q+P
Sbjct: 61 PLGESVIAMAERVLQEVDNLREQAADSRHEKKGTLSIGTTHTQARYALPKAIKAFSEQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+++QG P + EM+ + D+AI TE LS D L +PCY+W +I P HPLL
Sbjct: 121 DVHLNIVQGTPPGVAEMVATGKVDLAIATEGLSKFDNLAILPCYEWNRTVITPPGHPLLK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ IS YP++TY + F+GR + D+ F + L P ++ ++D+IKTYVEL +GI
Sbjct: 181 EKKLTLEAISRYPILTYVMGFTGRAQQDQSFIERGLKPNVIFTATDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD ++D L+++ AS LF + + + I++G+YLR Y Y+FI+L +P L R I
Sbjct: 241 GIIASMAFDPHKDAPLQAMDASDLFKPSTTHMGIRKGSYLRGYSYAFIELFAPHLQRSTI 300
Query: 301 NKIL 304
K +
Sbjct: 301 QKAI 304
>gi|192361573|ref|YP_001982416.1| transcriptional regulator CysB [Cellvibrio japonicus Ueda107]
gi|190687738|gb|ACE85416.1| transcriptional regulator CysB [Cellvibrio japonicus Ueda107]
Length = 324
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 202/305 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I++++E +K++ +EFS G LT+ATTHTQARYALP +I F Q+P
Sbjct: 61 PAGEAILKTAGEILRKVESIKQVAQEFSNERKGTLTLATTHTQARYALPPVIGSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE + LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPMQISEMAADGTVDFAIATEAMELFSDLIMMPCYKWNRCVVVPKGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++S++L++++ YP++TY F+GR KLD F + L P +V ++D+IKTYV L +G+
Sbjct: 181 VSSLTLEDVAKYPIVTYVFGFTGRSKLDEAFINRGLAPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A++ D +L ++ ASHLF +++++ ++GT+LR ++Y FI+ +P L + +
Sbjct: 241 GIIAKMAYNETVDSDLVALDASHLFEHSVTKIGFRRGTFLRGFMYDFIEKFAPHLTKDIV 300
Query: 301 NKILN 305
N+ N
Sbjct: 301 NEAFN 305
>gi|15676295|ref|NP_273430.1| transcriptional regulator CysB-like protein [Neisseria meningitidis
MC58]
gi|304386633|ref|ZP_07368917.1| HTH-type transcriptional regulator CysB [Neisseria meningitidis
ATCC 13091]
gi|385323511|ref|YP_005877950.1| putative HTH-type transcriptional regulator [Neisseria meningitidis
8013]
gi|385340689|ref|YP_005894561.1| putative transcriptional regulator CysB [Neisseria meningitidis
G2136]
gi|385852570|ref|YP_005899084.1| putative transcriptional regulator CysB [Neisseria meningitidis
H44/76]
gi|385854548|ref|YP_005901061.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240355]
gi|385857907|ref|YP_005904419.1| putative transcriptional regulator CysB [Neisseria meningitidis
NZ-05/33]
gi|416176629|ref|ZP_11609740.1| putative transcriptional regulator CysB [Neisseria meningitidis
M6190]
gi|416181767|ref|ZP_11611772.1| putative transcriptional regulator CysB [Neisseria meningitidis
M13399]
gi|416186479|ref|ZP_11613759.1| putative transcriptional regulator CysB [Neisseria meningitidis
M0579]
gi|416190497|ref|ZP_11615746.1| putative transcriptional regulator CysB [Neisseria meningitidis
ES14902]
gi|416195257|ref|ZP_11617662.1| putative transcriptional regulator CysB [Neisseria meningitidis
CU385]
gi|418287602|ref|ZP_12900181.1| putative transcriptional regulator CysB [Neisseria meningitidis
NM233]
gi|421538533|ref|ZP_15984708.1| cys regulon transcriptional activator [Neisseria meningitidis
93003]
gi|421539585|ref|ZP_15985744.1| cys regulon transcriptional activator [Neisseria meningitidis
93004]
gi|421541717|ref|ZP_15987832.1| cys regulon transcriptional activator [Neisseria meningitidis
NM255]
gi|421543828|ref|ZP_15989916.1| cys regulon transcriptional activator [Neisseria meningitidis
NM140]
gi|421545846|ref|ZP_15991904.1| cys regulon transcriptional activator [Neisseria meningitidis
NM183]
gi|421547904|ref|ZP_15993935.1| cys regulon transcriptional activator [Neisseria meningitidis
NM2781]
gi|421549936|ref|ZP_15995944.1| cys regulon transcriptional activator [Neisseria meningitidis
69166]
gi|421552171|ref|ZP_15998150.1| cys regulon transcriptional activator [Neisseria meningitidis
NM576]
gi|421554192|ref|ZP_16000140.1| cys regulon transcriptional activator [Neisseria meningitidis
98008]
gi|421556438|ref|ZP_16002354.1| cys regulon transcriptional activator [Neisseria meningitidis
80179]
gi|421558362|ref|ZP_16004244.1| cys regulon transcriptional activator [Neisseria meningitidis
92045]
gi|421566810|ref|ZP_16012551.1| cys regulon transcriptional activator [Neisseria meningitidis
NM3001]
gi|427827211|ref|ZP_18994252.1| HTH-type transcriptional regulator cysB [Neisseria meningitidis
H44/76]
gi|433464357|ref|ZP_20421850.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM422]
gi|433467338|ref|ZP_20424793.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 87255]
gi|433470656|ref|ZP_20428054.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 68094]
gi|433476954|ref|ZP_20434281.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 70012]
gi|433487563|ref|ZP_20444741.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M13255]
gi|433489738|ref|ZP_20446875.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM418]
gi|433491883|ref|ZP_20448983.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM586]
gi|433496147|ref|ZP_20453194.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M7089]
gi|433498230|ref|ZP_20455245.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M7124]
gi|433500164|ref|ZP_20457154.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM174]
gi|433502300|ref|ZP_20459270.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM126]
gi|433504307|ref|ZP_20461251.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 9506]
gi|433506521|ref|ZP_20463438.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 9757]
gi|433508728|ref|ZP_20465605.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 12888]
gi|433510636|ref|ZP_20467477.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 4119]
gi|433521168|ref|ZP_20477868.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 61103]
gi|433525407|ref|ZP_20482050.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 69096]
gi|433536199|ref|ZP_20492713.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 77221]
gi|433538137|ref|ZP_20494623.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 70030]
gi|7225602|gb|AAF40821.1| cys regulon transcriptional activator [Neisseria meningitidis MC58]
gi|254671793|emb|CBA03864.1| cys regulon transcriptional activator [Neisseria meningitidis
alpha275]
gi|261391898|emb|CAX49358.1| putative HTH-type transcriptional regulator [Neisseria meningitidis
8013]
gi|304339283|gb|EFM05359.1| HTH-type transcriptional regulator CysB [Neisseria meningitidis
ATCC 13091]
gi|316984884|gb|EFV63840.1| HTH-type transcriptional regulator cysB [Neisseria meningitidis
H44/76]
gi|325132931|gb|EGC55608.1| putative transcriptional regulator CysB [Neisseria meningitidis
M6190]
gi|325134963|gb|EGC57595.1| putative transcriptional regulator CysB [Neisseria meningitidis
M13399]
gi|325136953|gb|EGC59550.1| putative transcriptional regulator CysB [Neisseria meningitidis
M0579]
gi|325138918|gb|EGC61468.1| putative transcriptional regulator CysB [Neisseria meningitidis
ES14902]
gi|325141027|gb|EGC63533.1| putative transcriptional regulator CysB [Neisseria meningitidis
CU385]
gi|325198933|gb|ADY94389.1| putative transcriptional regulator CysB [Neisseria meningitidis
G2136]
gi|325199574|gb|ADY95029.1| putative transcriptional regulator CysB [Neisseria meningitidis
H44/76]
gi|325203489|gb|ADY98942.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240355]
gi|325208796|gb|ADZ04248.1| putative transcriptional regulator CysB [Neisseria meningitidis
NZ-05/33]
gi|372203570|gb|EHP17217.1| putative transcriptional regulator CysB [Neisseria meningitidis
NM233]
gi|402316203|gb|EJU51752.1| cys regulon transcriptional activator [Neisseria meningitidis
93003]
gi|402319197|gb|EJU54708.1| cys regulon transcriptional activator [Neisseria meningitidis
NM255]
gi|402321079|gb|EJU56558.1| cys regulon transcriptional activator [Neisseria meningitidis
93004]
gi|402325083|gb|EJU60496.1| cys regulon transcriptional activator [Neisseria meningitidis
NM183]
gi|402325291|gb|EJU60701.1| cys regulon transcriptional activator [Neisseria meningitidis
NM140]
gi|402327246|gb|EJU62637.1| cys regulon transcriptional activator [Neisseria meningitidis
NM2781]
gi|402331354|gb|EJU66693.1| cys regulon transcriptional activator [Neisseria meningitidis
69166]
gi|402332324|gb|EJU67651.1| cys regulon transcriptional activator [Neisseria meningitidis
NM576]
gi|402333462|gb|EJU68765.1| cys regulon transcriptional activator [Neisseria meningitidis
98008]
gi|402337784|gb|EJU73031.1| cys regulon transcriptional activator [Neisseria meningitidis
80179]
gi|402338182|gb|EJU73419.1| cys regulon transcriptional activator [Neisseria meningitidis
92045]
gi|402344753|gb|EJU79886.1| cys regulon transcriptional activator [Neisseria meningitidis
NM3001]
gi|432202780|gb|ELK58838.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 87255]
gi|432205775|gb|ELK61796.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM422]
gi|432211481|gb|ELK67432.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 68094]
gi|432217141|gb|ELK73011.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 70012]
gi|432225836|gb|ELK81575.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M13255]
gi|432229732|gb|ELK85413.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM418]
gi|432230284|gb|ELK85961.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM586]
gi|432236511|gb|ELK92118.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M7124]
gi|432236985|gb|ELK92586.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis M7089]
gi|432237351|gb|ELK92946.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM174]
gi|432242974|gb|ELK98489.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM126]
gi|432243204|gb|ELK98718.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 9506]
gi|432243845|gb|ELK99350.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 9757]
gi|432249035|gb|ELL04458.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 12888]
gi|432249850|gb|ELL05249.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 4119]
gi|432262206|gb|ELL17450.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 61103]
gi|432263101|gb|ELL18327.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 69096]
gi|432275475|gb|ELL30547.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 77221]
gi|432275813|gb|ELL30880.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 70030]
Length = 316
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|385338667|ref|YP_005892540.1| putative HTH-type transcriptional regulator [Neisseria meningitidis
WUE 2594]
gi|433474865|ref|ZP_20432210.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 88050]
gi|433512741|ref|ZP_20469542.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63049]
gi|433514917|ref|ZP_20471692.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2004090]
gi|433516973|ref|ZP_20473725.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 96023]
gi|433523530|ref|ZP_20480198.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97020]
gi|433528836|ref|ZP_20485443.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM3652]
gi|433529643|ref|ZP_20486240.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM3642]
gi|433531757|ref|ZP_20488325.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2007056]
gi|433533841|ref|ZP_20490389.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2001212]
gi|319411081|emb|CBY91484.1| putative HTH-type transcriptional regulator [Neisseria meningitidis
WUE 2594]
gi|432212022|gb|ELK67965.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 88050]
gi|432249820|gb|ELL05220.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63049]
gi|432255811|gb|ELL11139.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 96023]
gi|432255977|gb|ELL11303.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2004090]
gi|432261587|gb|ELL16835.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97020]
gi|432263940|gb|ELL19150.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM3652]
gi|432269236|gb|ELL24398.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2007056]
gi|432269345|gb|ELL24506.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis NM3642]
gi|432273085|gb|ELL28184.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2001212]
Length = 316
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNTGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNLDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|335043670|ref|ZP_08536697.1| transcriptional regulator [Methylophaga aminisulfidivorans MP]
gi|333790284|gb|EGL56166.1| transcriptional regulator [Methylophaga aminisulfidivorans MP]
Length = 306
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 209/305 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++VRE R++ +++ AA L+ SQPGVS + LE+EL + IF RHGKR+ G+T
Sbjct: 1 MKLQQLKYVREIARRDLSISAAANVLHASQPGVSNQVQLLEDELGLQIFERHGKRLTGIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ+++ E ++Q+++ ++++ + +G L+I TTHTQARYALP IK+F+ +P
Sbjct: 61 PIGQSVIEMAERVLQDVDNIRQLVADSKTEQSGTLSIGTTHTQARYALPSAIKKFSEHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L+++QG P ++ EM + D+AI TE L+ + L +PCY+W ++VP +HPLL
Sbjct: 121 NIHLNMVQGTPTEVGEMAATGKIDLAIATEGLAQFESLAILPCYEWNRCVVVPPEHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ + L++I+ Y ++TY + F+GR K D+ F + L P ++ ++D+IKTYVEL MGI
Sbjct: 181 VKKLCLEDIAQYEILTYVMGFTGRAKQDQAFIEKGLHPNVIFTATDADVIKTYVELEMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD ++D L+++ A HLF +++ + I++G+YLRSY+Y+FI+ + L++K +
Sbjct: 241 GIIASMAFDPDKDAPLQALDARHLFPPSVTHMGIRKGSYLRSYMYAFIEFFAAHLDKKTV 300
Query: 301 NKILN 305
K ++
Sbjct: 301 EKAIS 305
>gi|300024178|ref|YP_003756789.1| LysR family transcriptional regulator [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525999|gb|ADJ24468.1| transcriptional regulator, LysR family [Hyphomicrobium
denitrificans ATCC 51888]
Length = 310
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 206/300 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE +R+NFNLTE A ALYTSQ GVSK I +LE+EL +++FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETLRRNFNLTEVANALYTSQSGVSKHIKDLEDELGVELFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + +E I+ + +K++ +F+ D G +TIATTHTQARYALP I F +FP
Sbjct: 61 EPGKELAQIVERILLDTANIKRLADQFAKSDRGEITIATTHTQARYALPGPIAAFRKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+PK+I M+ + ADI I TE L S +++S P Y W + IIVP H L
Sbjct: 121 NVHLVLQQGSPKEIASMLNDGLADIGIATEALENSPEVVSFPYYSWHHGIIVPKGHALES 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++I+ +P+ITY F+GR +D F+ LTP IV+ +++D+IKTYVE+ +GI
Sbjct: 181 VKPLTIEKIAEWPIITYHEGFTGRPGVDATFAKAGLTPDIVMVALDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D +RD LR + SHLF T +R+ +++G +LR + Y FI+L +P L K +
Sbjct: 241 GIVASMAYDKDRDTGLRLLDNSHLFPKTTTRIALRRGRFLRRFAYRFIELCAPDLTEKVV 300
>gi|260768933|ref|ZP_05877867.1| regulatory protein CysB [Vibrio furnissii CIP 102972]
gi|260616963|gb|EEX42148.1| regulatory protein CysB [Vibrio furnissii CIP 102972]
Length = 324
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 QAGEDIVRIATEILSRVESIKSVAGEHTHPEMGMLNISTTHTQARYALPEVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPAQMSESIAKGSASFAIATEALHLYHDAIMLPCYHWNRAIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS++E++NYPL+TY FSGR +LD F LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDHISVEELANYPLVTYVFGFSGRSELDAAFHQVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D+ +D +L +I+ASH+FG + + + ++GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GLIASMAMDAIQDSDLVAINASHIFGASTTSIGFRRGTFLRTYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 ERAIS 305
>gi|92114546|ref|YP_574474.1| transcriptional regulator CysB [Chromohalobacter salexigens DSM
3043]
gi|91797636|gb|ABE59775.1| transcriptional regulator, LysR family [Chromohalobacter salexigens
DSM 3043]
Length = 323
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 202/304 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHNLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AI+ +++ ++ +K + +E S G+L+IATTHTQARYALP +I EF ++P
Sbjct: 61 PAGEAIIELAGKVLRTVDNIKHVSQEHSDERRGSLSIATTHTQARYALPPVIHEFRQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG PKQI +M+ QAD AI TE L L+ +PCY+W ++VP DHPL
Sbjct: 121 DVALHMQQGTPKQIAQMVSEGQADFAICTESLELFTDLVLLPCYRWNRCVLVPRDHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++L+ ++ +PL+TY F+GR +LD F LTP +VL ++D+IKTYV L +G+
Sbjct: 181 VEALTLETLAEHPLVTYLFGFTGRSQLDDAFKAHDLTPNVVLTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D++L ++ ASHLF ++ +++ I++GT++R +++ F+K +P L+R +
Sbjct: 241 GIVAHMAVDPVVDRDLVALDASHLFASSTTKIGIRRGTFMRGFMFDFVKRFAPHLDRDSV 300
Query: 301 NKIL 304
L
Sbjct: 301 EAAL 304
>gi|416159470|ref|ZP_11605928.1| putative transcriptional regulator CysB [Neisseria meningitidis
N1568]
gi|433472767|ref|ZP_20430136.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97021]
gi|433481190|ref|ZP_20438461.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2006087]
gi|433483439|ref|ZP_20440672.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2002038]
gi|433485416|ref|ZP_20442621.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97014]
gi|325128874|gb|EGC51730.1| putative transcriptional regulator CysB [Neisseria meningitidis
N1568]
gi|432212206|gb|ELK68148.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97021]
gi|432218769|gb|ELK74622.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2006087]
gi|432222385|gb|ELK78182.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 2002038]
gi|432224328|gb|ELK80094.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 97014]
Length = 316
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLAKFPLITYEFAFNTGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|254805584|ref|YP_003083805.1| transcriptional regulator CysB-like protein [Neisseria meningitidis
alpha14]
gi|421564588|ref|ZP_16010386.1| transcriptional regulator CysB [Neisseria meningitidis NM3081]
gi|254669126|emb|CBA07755.1| transcriptional regulator CysB [Neisseria meningitidis alpha14]
gi|402345856|gb|EJU80961.1| transcriptional regulator CysB [Neisseria meningitidis NM3081]
Length = 316
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNTGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|254480521|ref|ZP_05093768.1| LysR substrate binding domain protein [marine gamma proteobacterium
HTCC2148]
gi|214039104|gb|EEB79764.1| LysR substrate binding domain protein [marine gamma proteobacterium
HTCC2148]
Length = 324
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 197/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHELNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL + +++ +E +K++ +E+S G+L+IATTHTQARYALP I F ++P
Sbjct: 61 PAGEAILEAAGQVLRTVESIKQVAQEYSNEKKGSLSIATTHTQARYALPATISAFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE L LI +PCY+W I+VP DHPL
Sbjct: 121 DVSLHMHQGTPMQISEMAADGTVDFAIATEALELFSDLIMMPCYRWNRCILVPRDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ + L++++ +P++TY F+GR KLD F + LTP +V ++D+IKTYV L +GI
Sbjct: 181 VSVLGLEDVAAHPIVTYVFGFTGRSKLDEAFVEKGLTPRVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L ++ ASHLF ++++R+ ++GT+LR Y+Y FI+ +P L R +
Sbjct: 241 GIVAGMAHDPEMDPDLVALDASHLFASSVTRIGCRRGTFLRGYMYEFIEDFAPHLTRDLV 300
Query: 301 NK 302
+
Sbjct: 301 QE 302
>gi|237806793|ref|YP_002891233.1| transcriptional regulator Cbl [Tolumonas auensis DSM 9187]
gi|237499054|gb|ACQ91647.1| transcriptional regulator, LysR family [Tolumonas auensis DSM 9187]
Length = 318
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 200/295 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R +FNLTE A LYTSQ GVS+ I ELE+EL +++FIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCHFNLTEVANTLYTSQSGVSRHIKELEDELGVELFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ D G L +ATTHTQARYALP IIKEF Q+P
Sbjct: 61 EPGKALLTMAERILTEANNIRRLADNFANSDRGRLHVATTHTQARYALPGIIKEFRTQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG+P +I M+ + + DI + +E+++ +++ + P Y W + I+VP HPL
Sbjct: 121 QVQLVLHQGSPSEIVSMLLSGETDIGLTSELMADYEEIAAFPYYSWHHAILVPRGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+++S +PL+TY +GR K+D F++ + P IVL +SD+IKTYVEL +G+
Sbjct: 181 LPEVTLEDLSAWPLVTYQTGLTGRTKIDAAFAMAGIVPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +A D+ +D NL ++A HLF + +K+G + ++ + F+++ +P L
Sbjct: 241 GILADMAIDAVKDSNLVRLNAEHLFPANTAWFGMKKGKFQPNFAWHFLQICNPSL 295
>gi|359785900|ref|ZP_09289045.1| transcriptional regulator CysB [Halomonas sp. GFAJ-1]
gi|359296727|gb|EHK60970.1| transcriptional regulator CysB [Halomonas sp. GFAJ-1]
Length = 324
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 204/305 (66%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVNRHNLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ+I+ +++ E +K++ +E S G+L IATTHTQARYALP II EFT ++P
Sbjct: 61 PAGQSIIELAGQVLKLSENIKQVAQEHSDERRGSLAIATTHTQARYALPPIISEFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG PKQI +M+ AD AI TE L L+ +PCY+W ++VP +HPL L
Sbjct: 121 EVALHMQQGTPKQIAQMVSEGLADFAIATESLELFTDLVLLPCYRWNRCVLVPKEHPLAL 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L ++L+ ++ +PL+TY F+GR +LD F + LTP +VL ++D+IKTYV L MG
Sbjct: 181 LKGPLTLEALAEHPLVTYVFGFTGRSQLDDAFKAKGLTPNVVLTAADADVIKTYVRLGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +A DS D +L ++ ASHLF ++ +++ I++GT++R Y+Y F+ +P L R+
Sbjct: 241 VGIVAHMAVDSALDSDLVALDASHLFASSTTKIGIRRGTFMRGYMYDFLARFAPHLTRER 300
Query: 300 INKIL 304
+++ L
Sbjct: 301 VDEAL 305
>gi|296313330|ref|ZP_06863271.1| HTH-type transcriptional regulator CysB [Neisseria polysaccharea
ATCC 43768]
gi|296840143|gb|EFH24081.1| HTH-type transcriptional regulator CysB [Neisseria polysaccharea
ATCC 43768]
Length = 316
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ +D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGHDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L + CY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGRLSCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLAGFPLITYEFAFNAGSSIARAFAKARLERPDVALTAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|110834298|ref|YP_693157.1| transcriptional regulator CysB [Alcanivorax borkumensis SK2]
gi|110647409|emb|CAL16885.1| transcriptional regulator for cysteine regulon [Alcanivorax
borkumensis SK2]
Length = 325
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A ALYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAAALYTSQPGISKQIRMLEDELGVEVFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQAIL+ I+Q+ E ++++ +EF G L+IATTHTQARYALP +I+ FT FP
Sbjct: 61 PAGQAILQIAGEILQQTESIRRVSQEFRDESRGELSIATTHTQARYALPPVIRHFTGLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P QI+EM N D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGSVDFAIATEALDLFSDLIMMPCYRWNRTVVVPQGHPLAE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++L+ +++YPL+TY F+GR KLD F + L P +V ++D+IKTYV L MG
Sbjct: 181 ATKPLTLEALADYPLVTYVFGFTGRSKLDDAFVDKGLDPKVVFTAADADVIKTYVRLGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIA +A D DK L ++ ASHLF + +R+ ++GT+LR ++Y F++ +P L R+
Sbjct: 241 VGIIAHMAVDPVEDKGLIALDASHLFEPSTTRIGFRKGTFLRGFMYDFLEAFAPHLTRER 300
Query: 300 IN 301
++
Sbjct: 301 VD 302
>gi|269138904|ref|YP_003295605.1| transcriptional regulator [Edwardsiella tarda EIB202]
gi|387867577|ref|YP_005699046.1| Cys regulon transcriptional activator CysB [Edwardsiella tarda
FL6-60]
gi|267984565|gb|ACY84394.1| transcriptional regulator [Edwardsiella tarda EIB202]
gi|304558890|gb|ADM41554.1| Cys regulon transcriptional activator CysB [Edwardsiella tarda
FL6-60]
Length = 324
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +I++F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDQGSLYVATTHTQARYALPAVIQDFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L L+ +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPSQIAEAVCKGNADFAIATEALHLYADLVMLPCYHWNRALVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR LD FS LTP IV ++D+IKTYV L +G+
Sbjct: 181 RDQVSIEELAEYPLVTYTFGFTGRSALDSAFSQAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A D D +L ++ ASHLFG + +++ ++ T+LRSY+Y FI +P L R+ +
Sbjct: 241 GVIAGMALDPQIDGDLVALDASHLFGYSTTKIGFRRSTFLRSYMYDFIARFAPHLTREVV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DAAL 304
>gi|385342596|ref|YP_005896467.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240149]
gi|385850632|ref|YP_005897147.1| putative transcriptional regulator CysB [Neisseria meningitidis
M04-240196]
gi|421562591|ref|ZP_16008417.1| transcriptional regulator CysB [Neisseria meningitidis NM2795]
gi|421907438|ref|ZP_16337314.1| HTH-type transcriptional regulator cysB Cys regulon transcriptional
activator [Neisseria meningitidis alpha704]
gi|325202802|gb|ADY98256.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240149]
gi|325205455|gb|ADZ00908.1| putative transcriptional regulator CysB [Neisseria meningitidis
M04-240196]
gi|393291396|emb|CCI73306.1| HTH-type transcriptional regulator cysB Cys regulon transcriptional
activator [Neisseria meningitidis alpha704]
gi|402342735|gb|EJU77893.1| transcriptional regulator CysB [Neisseria meningitidis NM2795]
Length = 316
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNTGSSIARAFAKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|90021312|ref|YP_527139.1| transcriptional regulator CysB [Saccharophagus degradans 2-40]
gi|89950912|gb|ABD80927.1| LysR, substrate-binding [Saccharophagus degradans 2-40]
Length = 324
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHELNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AILR+ I++++E +K++ +EFS G+L+IATTHTQARYALP +I +F +P
Sbjct: 61 PAGEAILRTAGEILRKVESIKQVAQEFSNERKGSLSIATTHTQARYALPPVIGKFIQNYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE + LI +PCY+W I+VP HPL
Sbjct: 121 DVSLHMNQGTPMQISEMAADGTVDFAIATEAMELFSDLIMLPCYKWNRCILVPKGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ +SL++++ +PL+TY F+GR +LD F L P +V ++D+IKTYV L +GI
Sbjct: 181 LSMLSLEDVAKHPLVTYVFGFTGRSRLDEAFLEHGLAPKVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A++ D +L ++ ASHLF + +++ ++GT+LR ++Y FI+ +P L ++ +
Sbjct: 241 GIVAKMAYNEQEDSDLVALDASHLFRASTTKIGFRRGTFLRGFMYEFIEAFAPHLTKEVV 300
Query: 301 NKILN 305
N+ N
Sbjct: 301 NEAFN 305
>gi|418289850|ref|ZP_12902080.1| putative transcriptional regulator CysB [Neisseria meningitidis
NM220]
gi|421560545|ref|ZP_16006403.1| HTH-type transcriptional regulator CysB [Neisseria meningitidis
NM2657]
gi|372202739|gb|EHP16512.1| putative transcriptional regulator CysB [Neisseria meningitidis
NM220]
gi|402340095|gb|EJU75299.1| HTH-type transcriptional regulator CysB [Neisseria meningitidis
NM2657]
Length = 316
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I M+ + +AD+AIVTE + +L +PCY W + +IVP +HPLL
Sbjct: 121 KVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGKLPCYDWTHAVIVPNNHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|410663218|ref|YP_006915589.1| transcriptional regulator CysB [Simiduia agarivorans SA1 = DSM
21679]
gi|409025575|gb|AFU97859.1| transcriptional regulator CysB [Simiduia agarivorans SA1 = DSM
21679]
Length = 324
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFSRSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I++++E +K++ +EFS G+L+IATTHTQARYALPK+I+ F +P
Sbjct: 61 PAGEAILKTAGEILRKVESIKQVAQEFSNEKKGSLSIATTHTQARYALPKVIESFIKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+EM + D AI TE L L+ +PCY+W ++VP +HPL
Sbjct: 121 EVSLHMHQGTPMQISEMAADGTVDFAIATEALELFSDLVMMPCYRWNRCVVVPRNHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ +P++TY F+GR KLD F + L P +V ++D+IKTYV L +GI
Sbjct: 181 SSQLTLEAVAKHPIVTYVFGFTGRSKLDEAFIEKGLAPKVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A++ DK+L ++ ASHLF ++ +++ ++GT+LR ++Y FI+ +P L R+ +
Sbjct: 241 GIIAKMAYNEETDKDLVALDASHLFSSSTTKIGFRRGTFLRGFMYDFIQQFAPHLTREVV 300
Query: 301 NK 302
+
Sbjct: 301 EE 302
>gi|408375544|ref|ZP_11173208.1| transcriptional regulator CysB [Alcanivorax hongdengensis A-11-3]
gi|407764565|gb|EKF73038.1| transcriptional regulator CysB [Alcanivorax hongdengensis A-11-3]
Length = 324
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 194/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A AL+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAAALFTSQPGISKQIRMLEDELGVEVFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL I+Q E ++++ +E+ G+L+IATTHTQARYALP +IK+FT FP
Sbjct: 61 PAGEAILSIAGDILQRTESIRRVAQEYRDEARGDLSIATTHTQARYALPPVIKDFTGSFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM N D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPMQISEMAANGTVDFAIATEALELFSDLIMMPCYRWNRTVVVPEGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ +P++TY F+GR KLD F+ + L P +V ++D+IKTYV L MG+
Sbjct: 181 VKPLTLEALAEFPIVTYVFGFTGRSKLDDAFADRGLEPKVVFTAADADVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A D DK L ++ A HLF + +R+ ++GT++R ++Y F++ +P L R+ +
Sbjct: 241 GIIAHMAVDPIEDKGLVALDAGHLFEASTTRIGFRKGTFMRGFMYEFLQTFAPHLTRELV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|372271857|ref|ZP_09507905.1| transcriptional regulator CysB [Marinobacterium stanieri S30]
Length = 324
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 198/303 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL ++Q+ + ++++ +EFS G L +ATTHTQARYALP+ I +F +P
Sbjct: 61 PAGEAILEIAGEVLQKCDAIRQVAQEFSDERKGKLEVATTHTQARYALPQTIHDFIKDYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE +S LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHIHQGTPMQISEMAADGTVDFAIATEAMSHFSDLIMMPCYRWNRSVVVPEGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P+ITY F+GR KLD F + L P +VL ++SD+IKTYV L +G+
Sbjct: 181 LPELTLEALAEWPIITYVFGFTGRSKLDEAFINKGLEPKVVLTAVDSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA++AF+ +D L ++ ASHLF +++R+ ++GT+LR Y+Y FI+ +P L +
Sbjct: 241 GIIATMAFEDGQDDGLVALDASHLFEHSVTRIGFRKGTFLRGYMYDFIQTFAPHLTPDLV 300
Query: 301 NKI 303
++
Sbjct: 301 RRV 303
>gi|218768846|ref|YP_002343358.1| transcriptional regulator CysB-like protein [Neisseria meningitidis
Z2491]
gi|385327734|ref|YP_005882037.1| transcriptional regulator [Neisseria meningitidis alpha710]
gi|416212012|ref|ZP_11621649.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240013]
gi|433479160|ref|ZP_20436458.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63041]
gi|433519155|ref|ZP_20475879.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 65014]
gi|433540311|ref|ZP_20496767.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63006]
gi|121052854|emb|CAM09206.1| transcriptional regulator [Neisseria meningitidis Z2491]
gi|308388586|gb|ADO30906.1| transcriptional regulator [Neisseria meningitidis alpha710]
gi|325145175|gb|EGC67457.1| putative transcriptional regulator CysB [Neisseria meningitidis
M01-240013]
gi|389605032|emb|CCA43957.1| HTH-type transcriptional regulator cysB Cys regulon transcriptional
activator [Neisseria meningitidis alpha522]
gi|432218514|gb|ELK74372.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63041]
gi|432256659|gb|ELL11980.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 65014]
gi|432277960|gb|ELL33005.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 63006]
Length = 316
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + ++D+AIVTE + +L + CY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGRLSCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|407716944|ref|YP_006838224.1| LysR family transcriptional regulator [Cycloclasticus sp. P1]
gi|407257280|gb|AFT67721.1| LysR-family transcriptional regulator [Cycloclasticus sp. P1]
Length = 324
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 197/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ +YTSQPG+SK I LE+EL I IF R+GK + +T
Sbjct: 1 MKLQQLRYIWEVSKNNLNVSATAETIYTSQPGISKQIRILEDELGIPIFTRNGKHLTDMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + E +K I KE+ G L+IATTHTQARYALP IIK F + P
Sbjct: 61 PAGKKIISIAGEMLMKAENIKNIAKEYKNQTKGLLSIATTHTQARYALPSIIKTFMQEMP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM+ + D+AI TE L D L+ +PCY WE I+VP H L
Sbjct: 121 DVSLDIQQGTPVQISEMVSQGKVDLAIATEALELFDNLVMMPCYSWERCILVPKGHALTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ +SL +++ +PLITY F+GR KLD F Q L+P I L +++D+IKTYV L +G+
Sbjct: 181 IDRLSLIDVALHPLITYVFGFTGRSKLDDAFKAQGLSPDIALTAVDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D +L ++ A HLFGT+I+++ I++ +LR Y+Y FI L +P L + I
Sbjct: 241 GIVARMAYDEQVDNDLVALDAGHLFGTSITKIGIRKDAFLRGYMYEFIHLFAPHLTQAVI 300
Query: 301 NKIL 304
N+ +
Sbjct: 301 NQAM 304
>gi|418054187|ref|ZP_12692243.1| transcriptional regulator, LysR family [Hyphomicrobium
denitrificans 1NES1]
gi|353211812|gb|EHB77212.1| transcriptional regulator, LysR family [Hyphomicrobium
denitrificans 1NES1]
Length = 310
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 204/300 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE +R+NFNLTE A ALYTSQ GVSK I +LE+EL +++FIR GKR+ GLT
Sbjct: 1 MNFQQLRIIRETLRRNFNLTEVANALYTSQSGVSKHIKDLEDELGVELFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + +E I+ + +K++ +F+ D G +TIATTHTQARYALP I F +FP
Sbjct: 61 EPGKELAQIVERILLDTANIKRLADQFAKSDRGEITIATTHTQARYALPGPIAAFRKEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P++I M+ + ADI I TE L + +L+S P Y W + IIVP H L
Sbjct: 121 NVHLVLQQGSPREIAAMLNDGLADIGIATEALESTPELVSFPYYSWHHGIIVPKGHALES 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++ I+ +P+ITY F+GR +D F+ L P IV+ +++D+IKTYVE+ +GI
Sbjct: 181 VKPLTIERIAEWPIITYHGGFTGRPGVDATFAKAGLAPDIVMVALDADVIKTYVEVGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A+D RD LR + +SHLF T +R+ +++G +LR + Y FI+L +P L K +
Sbjct: 241 GIVASMAYDKERDAGLRLLDSSHLFPKTTTRIALRRGRFLRRFAYRFIELCAPDLTEKVV 300
>gi|399545189|ref|YP_006558497.1| HTH-type transcriptional regulator CysB [Marinobacter sp. BSs20148]
gi|399160521|gb|AFP31084.1| HTH-type transcriptional regulator CysB [Marinobacter sp. BSs20148]
Length = 325
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEIFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ EG+KKI +EFS G+L+IATTHTQARYALP +I+ F +P
Sbjct: 61 PGGEIIVREAGEILRRAEGIKKIAQEFSNQRAGDLSIATTHTQARYALPPVIRGFLDAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM AD AI TE + + LI +PCY+W I+VP DHPL
Sbjct: 121 DVSLHMNQGTPTQISEMAATGTADFAIATEGMEMFNDLIMMPCYRWNRCIVVPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ Y L+TY F+GR +LD F LTP +V ++D+IKTYV L +G+
Sbjct: 181 EPELTLSKLAEYSLVTYVFGFTGRSRLDEAFKSASLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D D +L I AS LF ++I+ + ++GT+LR Y+Y FI+ +P L R +
Sbjct: 241 GIIASMAYDPKVDTDLVVIDASKLFDSSITHIGFRKGTFLRGYMYDFIQRFAPHLTRDVV 300
Query: 301 NKILN 305
+++++
Sbjct: 301 DQVVS 305
>gi|269102955|ref|ZP_06155652.1| regulatory protein CysB [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162853|gb|EEZ41349.1| regulatory protein CysB [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 324
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT +FP
Sbjct: 61 PAGEEIVRIARDILSRVESIKSVAGEHTHPEVGTLNIATTHTQARYALPDVIQGFTARFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVAKGTTDFAIATEALHLYQDMIMLPCYHWNRSIVVRSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+ +++NY L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KEKISIHDLANYSLVTYVFGFTGRSELDSAFNRAGLTPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D RD++L +I ASH+F + +++ K+G++LR+Y+Y F++ +P L R +
Sbjct: 241 GVIASMAMDDERDQDLVAIDASHIFAASTTKIGFKKGSFLRTYMYDFMERFAPHLTRNVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DQAI 304
>gi|331005744|ref|ZP_08329105.1| Regulatory protein CysB [gamma proteobacterium IMCC1989]
gi|330420461|gb|EGG94766.1| Regulatory protein CysB [gamma proteobacterium IMCC1989]
Length = 324
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I++++E +K++ +EFS G+L++ATTHTQARY LPKIIK F Q+P
Sbjct: 61 PAGEAILQTTGEILRKVESIKQVAQEFSNDKKGSLSLATTHTQARYMLPKIIKGFIEQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM D AI TE + L+ +PCYQW I+VP +HPL
Sbjct: 121 DVSLHMNQGTPMQISEMAAGGSVDFAIATEAMELFSDLVMMPCYQWNRSIVVPKNHPLCQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+EI+ +P++TY F+GR KLD F + L P IV ++D+IKTYV L +G+
Sbjct: 181 VSELTLEEIAKHPIVTYVFGFTGRSKLDEAFMERGLAPKIVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D D +L + A HLF +I+++ ++GT++R ++Y F++ +P L R +
Sbjct: 241 GIIASMAHDEELDSDLVCLDAGHLFRPSITKIGFRRGTFIRGFMYEFMENFAPHLTRTMV 300
Query: 301 NK 302
++
Sbjct: 301 DE 302
>gi|237807908|ref|YP_002892348.1| LysR family transcriptional regulator [Tolumonas auensis DSM 9187]
gi|237500169|gb|ACQ92762.1| transcriptional regulator, LysR family [Tolumonas auensis DSM 9187]
Length = 324
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 201/304 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHSLNVSATAESLYTSQPGISKQVRMLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G +++ + I+ ++E ++ + +++ D G+L I+TTHTQARYALP++IK F ++P
Sbjct: 61 TAGHEVIKIAQEILAKVESIRSVAGQYTNPDQGSLNISTTHTQARYALPEVIKGFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI+E + +D AI TE L + L+++PCY W +IVP DHPL
Sbjct: 121 MVSLHMHQGSPAQISESVAKGTSDFAIATEALHLYEDLVTLPCYHWNRSVIVPKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+S YPL+TY F+GR +LD FS L P IV ++D+IKTYV L +G+
Sbjct: 181 CQQLTVEELSKYPLVTYTFGFTGRSELDAAFSRAGLIPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D+ DK+L + SHLF ++ +++ ++G +LRSY+Y FI+ +P L R+ +
Sbjct: 241 GVIATMAIDAEADKDLVLLDGSHLFQSSTTKICFRKGIFLRSYMYDFIERFAPHLTREIV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|338737008|ref|YP_004673970.1| HTH-type transcriptional regulator cysB [Hyphomicrobium sp. MC1]
gi|337757571|emb|CCB63391.1| HTH-type transcriptional regulator cysB (Cys regulon
transcriptional activator) [Hyphomicrobium sp. MC1]
Length = 311
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/300 (44%), Positives = 195/300 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR FNLTEAA L+TSQ GVSK I +LE+EL ++IF+RHGKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRHRFNLTEAANILFTSQSGVSKHIRDLEQELGVEIFVRHGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +++ +E I+ + E L ++ +FS D G L +ATTHTQARY LP +I F FP
Sbjct: 61 DPGKEVVKIVERILVDAENLSRVVADFSDGDEGILRVATTHTQARYTLPAVIARFKETFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L+L Q NPK + ++R ADIAI T+ L +I+ P + W++ ++VP H L
Sbjct: 121 DVRLNLQQANPKDLPTILREGDADIAIATDTLDDHPGIIAFPYHTWDHAVVVPRGHALAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L I+ +P+ITYD +GR ++D+ F LTP I + +++D+IK Y EL MG+
Sbjct: 181 EKTLTLAAIAAWPIITYDDGLTGRRRIDQAFEAAGLTPDISITALDADVIKAYAELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D D+ L I A +LF + S + +++G LR Y Y FI+ +P+L + I
Sbjct: 241 GIIASVAYDREHDRKLVRIDAPNLFLPSTSSIAVRRGRLLRRYAYRFIEHCNPRLTEQAI 300
>gi|451964681|ref|ZP_21917944.1| cys regulon transcriptional activator CysB [Edwardsiella tarda NBRC
105688]
gi|451316573|dbj|GAC63306.1| cys regulon transcriptional activator CysB [Edwardsiella tarda NBRC
105688]
Length = 324
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +I++F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDQGSLYVATTHTQARYALPAVIQDFIQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L L+ +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPSQIAEAVSKGNADFAIATEALHLYADLVMLPCYHWNRALVVRPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++ ++ YPL+TY F+GR LD+ F+ LTP+IV ++D+IKTYV L +G+
Sbjct: 181 CGQVSIEALAEYPLVTYTFGFTGRSTLDQAFNQAGLTPHIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A D D +L ++ ASHLFG + +++ ++ T+LRSY+Y FI +P L R+ +
Sbjct: 241 GVIAKMALDPQVDADLVALDASHLFGFSTTKLGFRRSTFLRSYMYDFIARFAPHLTREVV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DAAL 304
>gi|294635999|ref|ZP_06714438.1| HTH-type transcriptional regulator CysB [Edwardsiella tarda ATCC
23685]
gi|291090676|gb|EFE23237.1| HTH-type transcriptional regulator CysB [Edwardsiella tarda ATCC
23685]
Length = 328
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 5 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFSRSGKHLTQVT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +I++F ++P
Sbjct: 65 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDQGSLYVATTHTQARYALPAVIQDFIQRYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L L+ +PCY W ++V DHPL
Sbjct: 125 RVSLHMHQGSPSQIAEAVSKGNADFAIATEALHLYADLVMLPCYHWNRALVVRPDHPLAG 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++ ++ YPL+TY F+GR LD+ F+ LTP+IV ++D+IKTYV L +G+
Sbjct: 185 CGQVSIEALAEYPLVTYTFGFTGRSTLDQAFNQAGLTPHIVFTATDADVIKTYVRLGLGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A D D +L ++ ASHLFG + +++ ++ T+LRSY+Y FI +P L R+ +
Sbjct: 245 GVIAKMALDPQVDADLVALDASHLFGFSTTKLGFRRSTFLRSYMYDFIARFAPHLTREVV 304
Query: 301 NKIL 304
+ L
Sbjct: 305 DAAL 308
>gi|312882493|ref|ZP_07742234.1| transcriptional regulator CysB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369893|gb|EFP97404.1| transcriptional regulator CysB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 324
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I++ + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGEEIIKISQEILARVESIKSVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+V +HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAITKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKNHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +++++++ YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 LEKVTIQDLATYPLVTYVFGFTGRSELDTAFNRYGLTPKVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A DS +D +L +I ASHLFG++ + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAIDSEQDTDLVAIDASHLFGSSTTSIGFRRGTFLRSYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|59801907|ref|YP_208619.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
FA 1090]
gi|194099402|ref|YP_002002503.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
NCCP11945]
gi|240014819|ref|ZP_04721732.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
DGI18]
gi|240017268|ref|ZP_04723808.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
FA6140]
gi|240121341|ref|ZP_04734303.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
PID24-1]
gi|254494360|ref|ZP_05107531.1| transcriptional regulator [Neisseria gonorrhoeae 1291]
gi|268595456|ref|ZP_06129623.1| transcriptional regulator [Neisseria gonorrhoeae 35/02]
gi|268597206|ref|ZP_06131373.1| transcriptional regulator [Neisseria gonorrhoeae FA19]
gi|268599382|ref|ZP_06133549.1| transcriptional regulator [Neisseria gonorrhoeae MS11]
gi|268602012|ref|ZP_06136179.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
gi|268604344|ref|ZP_06138511.1| transcriptional regulator [Neisseria gonorrhoeae PID1]
gi|268682800|ref|ZP_06149662.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
gi|268684789|ref|ZP_06151651.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
gi|268687228|ref|ZP_06154090.1| transcriptional regulator [Neisseria gonorrhoeae SK-93-1035]
gi|291043109|ref|ZP_06568832.1| HTH-type transcriptional regulator cysB [Neisseria gonorrhoeae
DGI2]
gi|293398449|ref|ZP_06642627.1| cysB, transcriptional regulator CysB [Neisseria gonorrhoeae F62]
gi|385336358|ref|YP_005890305.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
TCDC-NG08107]
gi|59718802|gb|AAW90207.1| putative cysteine transcriptional regulatory protein, activator
[Neisseria gonorrhoeae FA 1090]
gi|193934692|gb|ACF30516.1| CysB [Neisseria gonorrhoeae NCCP11945]
gi|226513400|gb|EEH62745.1| transcriptional regulator [Neisseria gonorrhoeae 1291]
gi|268548845|gb|EEZ44263.1| transcriptional regulator [Neisseria gonorrhoeae 35/02]
gi|268550994|gb|EEZ46013.1| transcriptional regulator [Neisseria gonorrhoeae FA19]
gi|268583513|gb|EEZ48189.1| transcriptional regulator [Neisseria gonorrhoeae MS11]
gi|268586143|gb|EEZ50819.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
gi|268588475|gb|EEZ53151.1| transcriptional regulator [Neisseria gonorrhoeae PID1]
gi|268623084|gb|EEZ55484.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
gi|268625073|gb|EEZ57473.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
gi|268627512|gb|EEZ59912.1| transcriptional regulator [Neisseria gonorrhoeae SK-93-1035]
gi|291012715|gb|EFE04698.1| HTH-type transcriptional regulator cysB [Neisseria gonorrhoeae
DGI2]
gi|291610920|gb|EFF40017.1| cysB, transcriptional regulator CysB [Neisseria gonorrhoeae F62]
gi|317164901|gb|ADV08442.1| transcriptional regulator CysB-like protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 316
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E R N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + ++D+AIVTE + +L + CY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGRLSCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R F+ +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFAKARLERPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|407793721|ref|ZP_11140753.1| transcriptional regulator CysB [Idiomarina xiamenensis 10-D-4]
gi|407214420|gb|EKE84268.1| transcriptional regulator CysB [Idiomarina xiamenensis 10-D-4]
Length = 324
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVMNHNLNVSATAENLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ + I+ +++G+K + E + D G L +ATTHTQARYALP++IK F ++P
Sbjct: 61 PAGQDVIAIAQEILSKVDGIKSVAAEHTLPDQGKLNVATTHTQARYALPQVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG+P+QI+E +AD AI TE L L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGSPQQISEAAAKGKADFAIATEALHLYQDLVMLPCYHWNRALIVRPDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L++IS+++++ YP++TY F+GR +LD+ F L P+IV ++D+IKTYV + +GI
Sbjct: 181 LDNISIEDVARYPIVTYVYGFTGRSELDKAFGAAGLEPHIVFTATDADVIKTYVRMGIGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A++ +D +L ++ A HLF + +++ ++GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GVVASMAYEPKQDSDLVALPAGHLFAHSTTKIGFRRGTFLRTYMYDFMEAFAPHLTRDRV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|335042725|ref|ZP_08535752.1| transcriptional regulator [Methylophaga aminisulfidivorans MP]
gi|333789339|gb|EGL55221.1| transcriptional regulator [Methylophaga aminisulfidivorans MP]
Length = 309
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 200/302 (66%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE V+ +FNLTEAA L+TSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRILRETVKHDFNLTEAANHLFTSQSGVSKHIKDLEDELGVELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +++ E I+ + +K + + D+G LTIATTHTQARY LP +I F ++P
Sbjct: 61 EPGKELIKIAERILLDAGNIKNLADHYRDNDSGELTIATTHTQARYILPPVITLFKQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L L QG+P++I +++ N +ADI I TE L +L S P YQW + +IVP H L
Sbjct: 121 KVHLKLHQGSPEEIAKLLLNGEADIGIATETLGDIAELASFPYYQWTHTVIVPKGHVLAE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+SLK I+ YP++TY F+GR +D+ F P I + +++D+IK+YVEL MG
Sbjct: 181 QTEPLSLKSINAYPIVTYHDGFTGRAIIDKAFRHVGEIPNIDMSALDADVIKSYVELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
IGIIAS+A+D RD L ++SA HLF + S++ +++G YLR Y Y FI+L S + +
Sbjct: 241 IGIIASVAYDKQRDAGLIALSADHLFEPSWSKIGLRRGHYLRQYAYDFIELCSENITAEV 300
Query: 300 IN 301
IN
Sbjct: 301 IN 302
>gi|269960791|ref|ZP_06175162.1| transcriptional regulator for cysteine regulon [Vibrio harveyi
1DA3]
gi|269834455|gb|EEZ88543.1| transcriptional regulator for cysteine regulon [Vibrio harveyi
1DA3]
Length = 324
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDRVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEDQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|388470869|ref|ZP_10145078.1| HTH-type transcriptional regulator CysB [Pseudomonas synxantha
BG33R]
gi|388007566|gb|EIK68832.1| HTH-type transcriptional regulator CysB [Pseudomonas synxantha
BG33R]
Length = 324
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 201/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+N DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTNLDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|387892967|ref|YP_006323264.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
A506]
gi|423690773|ref|ZP_17665293.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
SS101]
gi|387160831|gb|AFJ56030.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
A506]
gi|387998647|gb|EIK59976.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
SS101]
Length = 324
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 201/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+N DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTNLDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|152994994|ref|YP_001339829.1| LysR family transcriptional regulator [Marinomonas sp. MWYL1]
gi|150835918|gb|ABR69894.1| transcriptional regulator, LysR family [Marinomonas sp. MWYL1]
Length = 308
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 198/302 (65%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VRQ+FNLTEAA L+TSQ GVSK I +LE+EL +++F+R GKR+ GLT
Sbjct: 1 MNFQQLRILRETVRQDFNLTEAANHLFTSQSGVSKHIKDLEDELGVELFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +++ E I+ + +K + + D+G LTIATTHTQARY LP +I F ++P
Sbjct: 61 EPGKELIKIAERILLDANNIKNLADHYRDNDSGELTIATTHTQARYILPAVITLFKQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPL-L 179
KV L L QG+P +I +++ +ADI I TE L +L S P YQW + ++VP DHPL
Sbjct: 121 KVHLKLHQGSPSEIAKLLLAGEADIGIATETLGDIAELASFPYYQWTHTVVVPKDHPLNQ 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++LK I+ YP++TY F+GR +++ F P I + +++D+IK+YVEL MG
Sbjct: 181 HPQPLTLKAINAYPIVTYHDGFTGRANIEKAFRHAGEKPNIDMSALDADVIKSYVELGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GIIAS+A+D RD +L + + HLF + S++ +++G YLR Y Y FI L + L
Sbjct: 241 VGIIASVAYDEKRDTDLVILPSQHLFEPSWSKIGLRRGHYLRQYAYDFIHLCADSLTADV 300
Query: 300 IN 301
IN
Sbjct: 301 IN 302
>gi|389701474|ref|ZP_10185285.1| transcriptional regulator [Leptothrix ochracea L12]
gi|388591113|gb|EIM31381.1| transcriptional regulator [Leptothrix ochracea L12]
Length = 408
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 198/273 (72%), Gaps = 1/273 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R VRE R FNLTE A L+TSQPG+S+ I ELEEEL I+IF+R GKR+ GLT
Sbjct: 1 MNFQQLRAVRETTRSGFNLTEVAGVLHTSQPGISRQIRELEEELGIEIFVRAGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L +E ++ + E LK++G++F+A D G L+IA TH+QARYALP ++++F +P
Sbjct: 61 QPGEAVLPIVERLLLDAENLKRVGEDFTAQDNGRLSIAATHSQARYALPAVVRDFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L L QG+PKQ+ EM+ + +ADI + TE L+ D LI++PCY+W + ++VP H LL
Sbjct: 121 KVTLHLQQGSPKQVAEMLLSGEADIGVATEALAHYDALIALPCYRWTHSVVVPPGHALLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
I+L +++ YPLITY+ ++GR +D F+ L P IVL +++D+IKTYVEL +G
Sbjct: 181 STEPITLAQLAEYPLITYEPGYTGRAHIDEAFAKVGLQPEIVLGAMDADVIKTYVELGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRV 272
+GI+AS+AFD+ RD+ LR++ A HLF ++R+
Sbjct: 241 VGIVASMAFDAERDRTLRALDARHLFEINLTRL 273
>gi|375265108|ref|YP_005022551.1| transcriptional regulator CysB [Vibrio sp. EJY3]
gi|369840429|gb|AEX21573.1| transcriptional regulator CysB [Vibrio sp. EJY3]
Length = 324
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEEIVRISQEILGRVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTTRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS+ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV++ +G+
Sbjct: 181 KANISIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVKMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEKQDTDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|433469383|ref|ZP_20426805.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 98080]
gi|432204066|gb|ELK60113.1| bacterial regulatory helix-turn-helix , lysR family protein
[Neisseria meningitidis 98080]
Length = 316
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 211/306 (68%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E + N N++EAA+AL+TSQPG+SK I LEEE+ I IFIR GKR+ ++
Sbjct: 1 MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+++++ +K IG EF+ D+G+LT+ATTHTQARYALP I+ +F ++P
Sbjct: 61 QPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHTQARYALPLIVADFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV L++ QG+P I +M+ + ++D+AIVTE + +L + CY W + +IVP DHPLL
Sbjct: 121 KVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGRLSCYDWTHAVIVPNDHPLLE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
N + +++++ +PLITY+ +F+ + R FS +L P + L ++D++KTYV L +
Sbjct: 181 CRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A++ + D +L+ + A+HLF + + + ++ TYLR Y Y FI+ +P L R+
Sbjct: 241 GVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE 300
Query: 299 FINKIL 304
+++IL
Sbjct: 301 KVDRIL 306
>gi|336314994|ref|ZP_08569907.1| transcriptional regulator [Rheinheimera sp. A13L]
gi|335880616|gb|EGM78502.1| transcriptional regulator [Rheinheimera sp. A13L]
Length = 325
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 197/303 (65%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGIQVFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + I+ ++E +K + KE + D G L IATTHTQARYALP +I F +FP
Sbjct: 61 PAGRDVIEIAQQILAKVESIKAVAKEHTLPDQGKLNIATTHTQARYALPPVISGFMKKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI E AD AI TE + + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQIAEAASRGDADFAIATEAMHLFNDLVMLPCYHWNRSVIVRHDHPLAS 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L+ I++++++ +P++TY F+GR +LDR F + L P IV ++D+IKTYV L +G
Sbjct: 181 LSRKIAVEDVAEHPIVTYVFGFTGRSELDRAFGEKGLEPKIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D + DK+L SI ASHLF + +++ ++GT+LR+Y+Y FI+ +P L R+
Sbjct: 241 VGVIASMAMDKDLDKDLVSIDASHLFAASTTKIGFRKGTFLRTYMYDFIERFAPHLTREV 300
Query: 300 INK 302
+ K
Sbjct: 301 VEK 303
>gi|118594767|ref|ZP_01552114.1| transcriptional regulator for cysteine regulon [Methylophilales
bacterium HTCC2181]
gi|118440545|gb|EAV47172.1| transcriptional regulator for cysteine regulon [Methylophilales
bacterium HTCC2181]
Length = 309
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 195/295 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R + E V +FN++ AAK ++TSQPGVSK I LEEE+ + IF RHGKR+ GLT
Sbjct: 1 MKLQQLRCIYEVVLNSFNISSAAKTMHTSQPGVSKQIQLLEEEIGVKIFQRHGKRLVGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG + SI I++E +K I E+ + G TIATTHTQARY LPK+++ F ++P
Sbjct: 61 DPGAKVFESISEIIRESRNIKNITAEYENNNEGKFTIATTHTQARYKLPKVVETFVKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
K+ L++ QGNP Q+TE I +AD+ I TE + +DK+ IPCY W +++P HPL
Sbjct: 121 KINLNIHQGNPSQVTEQILKGEADVGIATETIGVNDKIFCIPCYSWNRSLVMPKGHPLEQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI+L+ +++YPLITYD +F+G + + F + P I+L I++D+IKTYV L +GI
Sbjct: 181 EESITLQHLASYPLITYDYAFTGSTIVSKVFKEANVEPNIMLTAIDADVIKTYVNLDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
G+IA +AFD +D++L + SHLF + + + I+Q T++R++ FI++ P +
Sbjct: 241 GLIAEMAFDKEKDRDLIAKDVSHLFPVSTTFIGIRQDTFVRTFTCDFIRMFIPHM 295
>gi|448747736|ref|ZP_21729391.1| LysR, substrate-binding [Halomonas titanicae BH1]
gi|445564679|gb|ELY20796.1| LysR, substrate-binding [Halomonas titanicae BH1]
Length = 324
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 200/306 (65%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVNRHNLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ+I+ +++ E +K++ +E S G+L IATTHTQARYALP II EFT+++P
Sbjct: 61 PAGQSIIDLAGQVLRLTENIKQVAQEHSDERRGSLAIATTHTQARYALPPIISEFTLKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG PKQI +M+ QAD AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMQQGTPKQIAQMVSEGQADFAIATESLELFTDLVLLPCYRWNRCVLVPKGHPLAT 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++L+ + +PL+TY F+GR +LD F + LTP +VL ++D+IKTYV L MG
Sbjct: 181 HQGPLTLEALGEHPLVTYVFGFTGRSQLDDAFKAKGLTPNVVLTAADADVIKTYVRLGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +A D D +L ++ ASHLF ++ +++ I++GT++R Y+Y F++ +P L R
Sbjct: 241 VGIVAHMAVDEALDDDLVALDASHLFASSTTKIGIRRGTFMRGYMYDFLERFAPHLTRDR 300
Query: 300 INKILN 305
+++ L
Sbjct: 301 VDEALT 306
>gi|153835834|ref|ZP_01988501.1| HTH-type transcriptional regulator CysB [Vibrio harveyi HY01]
gi|388600120|ref|ZP_10158516.1| transcriptional regulator CysB [Vibrio campbellii DS40M4]
gi|444424700|ref|ZP_21220153.1| transcriptional regulator CysB [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|148865812|gb|EDL66810.1| HTH-type transcriptional regulator CysB [Vibrio harveyi HY01]
gi|444242004|gb|ELU53521.1| transcriptional regulator CysB [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 324
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDVVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEDQDGDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|383190217|ref|YP_005200345.1| transcriptional regulator [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588475|gb|AEX52205.1| transcriptional regulator [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 317
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 137/296 (46%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE + L+TSQ GVS+ I ELE+EL ++IFIR GKR+ GLT
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVSNMLFTSQSGVSRHIRELEDELGVEIFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ E + ++++ FS D G LTIATTHTQARY+LPK+IK F +P
Sbjct: 61 EPGKELLAVAERILNEAQNIRRLADVFSKEDAGVLTIATTHTQARYSLPKVIKAFRAIYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P+++ M+ + QAD+AI +E L + + P Y+W + I+VP HPL L
Sbjct: 121 GVRLELHQGSPQEVLAMLLSGQADVAIASEKLMNDPSVAAFPYYRWHHAIVVPQGHPLTL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ +S PLITY +GR +LD FS LT IVL +SD+IKTYVEL +G+
Sbjct: 181 QHPLTLQHLSEQPLITYRQGITGRSRLDEAFSRAALTADIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A AF++ RD L+ I+A HLF + +K+ R+YV+ FI+L +P L+
Sbjct: 241 GILADKAFEATRDTGLQLINAEHLFEANTVWLGLKKAQLQRNYVWRFIELCNPGLS 296
>gi|352106247|ref|ZP_08961298.1| transcriptional regulator CysB [Halomonas sp. HAL1]
gi|350597895|gb|EHA14020.1| transcriptional regulator CysB [Halomonas sp. HAL1]
Length = 324
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 201/306 (65%), Gaps = 1/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVNRHNLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ+I+ +++ + +K++ +E S G+L IATTHTQARYALP II EFT+++P
Sbjct: 61 PAGQSIIELAGQVLRLTDNIKQVAQEHSDERRGSLAIATTHTQARYALPPIISEFTLKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG PKQI +M+ QAD AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMQQGTPKQIAQMVSEGQADFAIATESLELFTDLVLLPCYRWNRCVLVPKGHPLAT 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+ ++L+ + +PL+TY F+GR +LD F + LTP +VL ++D+IKTYV L MG
Sbjct: 181 HDGPLTLEALGEHPLVTYVFGFTGRSQLDDAFKAKGLTPNVVLTAADADVIKTYVRLGMG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+GI+A +A D D +L ++ ASHLF ++ +++ I++GT++R Y+Y F++ +P L R
Sbjct: 241 VGIVAHMAVDEALDDDLVALDASHLFASSTTKIGIRRGTFMRGYMYDFLERFAPHLTRDR 300
Query: 300 INKILN 305
+++ L
Sbjct: 301 VDEALT 306
>gi|424045304|ref|ZP_17782869.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HENC-03]
gi|408886354|gb|EKM25028.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HENC-03]
Length = 324
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDRVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|350531878|ref|ZP_08910819.1| transcriptional regulator CysB [Vibrio rotiferianus DAT722]
Length = 324
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KETVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDGDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|238919615|ref|YP_002933130.1| transcriptional regulator, LysR family [Edwardsiella ictaluri
93-146]
gi|238869184|gb|ACR68895.1| transcriptional regulator, LysR family [Edwardsiella ictaluri
93-146]
Length = 324
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQAI+R ++ +++ +K + E + D G+L +ATTHTQARYALP +I+ F ++P
Sbjct: 61 PAGQAIIRIAREVLSKVDAIKAVAGEHTYPDQGSLYVATTHTQARYALPAVIQNFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L L+ +PCY W ++V +HPL
Sbjct: 121 RVSLHMHQGSPSQIAEAVCKGNADFAIATEALHLYADLVMLPCYHWNRALVVMPNHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RDQVSIEELAEYPLVTYTFGFTGRSTLDGAFNQAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA +A D D +L ++ ASHLFG + +++ ++ T+LRSY+Y FI +P L R+ I
Sbjct: 241 GVIAGMALDPQIDGDLVALDASHLFGYSTTKIGFRRSTFLRSYMYDFIARFAPHLTREVI 300
Query: 301 NKIL 304
+ L
Sbjct: 301 DAAL 304
>gi|424032963|ref|ZP_17772379.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HENC-01]
gi|408875042|gb|EKM14196.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HENC-01]
Length = 324
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDTVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEDQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|28897875|ref|NP_797480.1| transcriptional regulator CysB [Vibrio parahaemolyticus RIMD
2210633]
gi|153839238|ref|ZP_01991905.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AQ3810]
gi|260361805|ref|ZP_05774830.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
K5030]
gi|260877034|ref|ZP_05889389.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AN-5034]
gi|260895118|ref|ZP_05903614.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
Peru-466]
gi|260901204|ref|ZP_05909599.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AQ4037]
gi|433657325|ref|YP_007274704.1| Cys regulon transcriptional activator CysB [Vibrio parahaemolyticus
BB22OP]
gi|28806088|dbj|BAC59364.1| cys regulon transcriptional activator [Vibrio parahaemolyticus RIMD
2210633]
gi|149747233|gb|EDM58221.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AQ3810]
gi|308087274|gb|EFO36969.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
Peru-466]
gi|308093804|gb|EFO43499.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AN-5034]
gi|308106709|gb|EFO44249.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AQ4037]
gi|308113250|gb|EFO50790.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
K5030]
gi|432508013|gb|AGB09530.1| Cys regulon transcriptional activator CysB [Vibrio parahaemolyticus
BB22OP]
Length = 324
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDLVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D++L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDRDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|417320201|ref|ZP_12106747.1| transcriptional regulator CysB [Vibrio parahaemolyticus 10329]
gi|328473164|gb|EGF44012.1| transcriptional regulator CysB [Vibrio parahaemolyticus 10329]
Length = 324
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDLVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D++L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDRDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|163801979|ref|ZP_02195875.1| transcriptional regulator for cysteine regulon [Vibrio sp. AND4]
gi|159174120|gb|EDP58928.1| transcriptional regulator for cysteine regulon [Vibrio sp. AND4]
Length = 324
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDVVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAVDHDQDGDLVAIDASHLFGASTTSIGFRRGTFLRSYMYDFVERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|322832955|ref|YP_004212982.1| LysR family transcriptional regulator [Rahnella sp. Y9602]
gi|384258134|ref|YP_005402068.1| LysR family transcriptional regulator [Rahnella aquatilis HX2]
gi|321168156|gb|ADW73855.1| transcriptional regulator, LysR family [Rahnella sp. Y9602]
gi|380754110|gb|AFE58501.1| LysR family transcriptional regulator [Rahnella aquatilis HX2]
Length = 317
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/296 (46%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE + L+TSQ GVS+ I ELE+EL ++IFIR GKR+ GLT
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVSNMLFTSQSGVSRHIRELEDELGVEIFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ E + ++++ FS D G LTIATTHTQARY+LPK+IK F +P
Sbjct: 61 EPGKELLAVAERILNEAQNIRRLADVFSKEDAGVLTIATTHTQARYSLPKVIKAFRAIYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P+++ M+ + QAD+AI +E L + + P Y+W + I+VP HPL L
Sbjct: 121 GVRLELHQGSPQEVLTMLLSGQADVAIASEKLMNDPSVAAFPYYRWHHAIVVPQGHPLTL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ +S PLITY +GR +LD FS LT IVL +SD+IKTYVEL +G+
Sbjct: 181 QHPLTLQHLSEQPLITYRQGITGRSRLDEAFSRAALTADIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A AF++ RD L+ I+A HLF + +K+ R+YV+ FI+L +P L+
Sbjct: 241 GILADKAFEAARDTGLQLINAEHLFEANTVWLGLKKAQLQRNYVWRFIELCNPGLS 296
>gi|358410624|gb|AEU10019.1| transcriptional regulator CysB [Photobacterium damselae subsp.
piscicida]
Length = 324
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 193/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT +FP
Sbjct: 61 PAGEEIVRIARDILSRVESIKSVAGEHTHPEVGTLNIATTHTQARYALPDVIQGFTARFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVAKGTTDFAIATEALHLYQDMIMLPCYHWNRSIVVRSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+ +++NY L+TY F+GR +LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 KEKISIHDLANYSLVTYVFGFTGRSELDSAFNRAGLIPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D RD++L +I ASH+F + +++ K+G++LR+Y+Y F++ +P L R +
Sbjct: 241 GVIASMAMDDERDQDLVAIDASHIFAASTTKIGFKKGSFLRTYMYDFMERFAPHLTRNVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DQAI 304
>gi|387129880|ref|YP_006292770.1| Cys regulon transcriptional activator CysB [Methylophaga sp. JAM7]
gi|386271169|gb|AFJ02083.1| Cys regulon transcriptional activator CysB [Methylophaga sp. JAM7]
Length = 306
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 199/306 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++VRE RQ +++ AA++L+ SQPGVS I LE EL + IF RHGKR+ +T
Sbjct: 1 MKLQQLKYVREVARQQLSISAAAQSLFASQPGVSNQIQALETELGLQIFERHGKRLTAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQA++ + E ++Q ++ LK + + G L+I TTHTQARYALP I +F FP
Sbjct: 61 PLGQAVIDTAEQVLQAVDNLKSLAADNRNEFQGTLSIGTTHTQARYALPPAIHQFARDFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L+++QG P ++ EM + D+AI TE LS D L +PCYQW I++P HPL
Sbjct: 121 NVHLNMVQGTPPEVAEMAATGKVDMAIATEGLSQFDNLAILPCYQWNRTIVMPPSHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L +I+ YP++TY + F+GR + D+ F + L P ++ ++D+IKTYVEL +GI
Sbjct: 181 IKKPKLADIAEYPILTYVMGFTGRAQQDQAFIEKGLKPNVIFTATDADVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD+ +DK L +I AS+LF + + + I++G++LR + Y+FI+ +P L + I
Sbjct: 241 GIIASMAFDAKKDKPLVAIDASNLFQPSTTHLGIRKGSHLRQFSYAFIRYFAPHLEQNII 300
Query: 301 NKILNN 306
+ +++
Sbjct: 301 EQAIHS 306
>gi|126667404|ref|ZP_01738376.1| transcriptional regulator for cysteine regulon [Marinobacter sp.
ELB17]
gi|126628160|gb|EAZ98785.1| transcriptional regulator for cysteine regulon [Marinobacter sp.
ELB17]
Length = 325
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGLEIFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I++ EG+KKI +EFS G+L+IATTHTQARYALP +I+ F +P
Sbjct: 61 PGGEIIVREAGEILRRAEGIKKIAQEFSNQRAGDLSIATTHTQARYALPPVIRGFLDAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM AD AI TE + + LI +PCY+W I+VP DHPL
Sbjct: 121 DVSLHMNQGTPTQISEMAATGTADFAIATEGMEMFNDLIMMPCYRWNRCIVVPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +++ Y L+TY F+GR +LD F L P +V ++D+IKTYV L +G+
Sbjct: 181 EPKLTLSKLAEYSLVTYVFGFTGRSRLDEAFKSASLIPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A+D D +L I AS LF ++I+ + ++GT+LR Y+Y FI+ +P L R +
Sbjct: 241 GIIASMAYDPKVDTDLVVIDASKLFDSSITHIGFRKGTFLRGYMYDFIQRFAPHLTRDVV 300
Query: 301 NKILN 305
+++++
Sbjct: 301 DQVVS 305
>gi|402701881|ref|ZP_10849860.1| transcriptional regulator CysB [Pseudomonas fragi A22]
Length = 324
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+N DK+L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDANLDKDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|365849242|ref|ZP_09389713.1| cys regulon transcriptional activator CysB [Yokenella regensburgei
ATCC 43003]
gi|364569886|gb|EHM47508.1| cys regulon transcriptional activator CysB [Yokenella regensburgei
ATCC 43003]
Length = 324
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVEAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D + D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPDSDPDLVKLDAQGVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|260776367|ref|ZP_05885262.1| regulatory protein CysB [Vibrio coralliilyticus ATCC BAA-450]
gi|260607590|gb|EEX33855.1| regulatory protein CysB [Vibrio coralliilyticus ATCC BAA-450]
Length = 324
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL
Sbjct: 121 KVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KGKISIEDLASYPLVTYVFGFTGRSELDTAFNKVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D++L +I ASH+FG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDKEQDEDLVAIDASHIFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|254229941|ref|ZP_04923343.1| HTH-type transcriptional regulator CysB [Vibrio sp. Ex25]
gi|262394654|ref|YP_003286508.1| regulatory protein CysB [Vibrio sp. Ex25]
gi|151937510|gb|EDN56366.1| HTH-type transcriptional regulator CysB [Vibrio sp. Ex25]
gi|262338248|gb|ACY52043.1| regulatory protein CysB [Vibrio sp. Ex25]
Length = 324
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDKVTISDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|325982686|ref|YP_004295088.1| LysR family transcriptional regulator [Nitrosomonas sp. AL212]
gi|325532205|gb|ADZ26926.1| transcriptional regulator, LysR family [Nitrosomonas sp. AL212]
Length = 311
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 204/305 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R + E V++N+NLTE A AL+TSQ GVSK I +LE+EL+I++FIR GKR GLT
Sbjct: 1 MNFQQLRIINETVKRNYNLTEVANALFTSQSGVSKHIKDLEDELNIELFIRKGKRFIGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ +++ +E I+ + + +K++ ++FS +D G+LTIATTHTQA+Y LP ++ EF FP
Sbjct: 61 GPGKELVKIVERILFDTKNIKRLAEQFSNHDQGHLTIATTHTQAQYTLPPVVAEFKKIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+L L + P +I M+ + +ADI I TE L + L+S P Y W++ IIVP+ HPL
Sbjct: 121 KVQLILHESRPDEILSMLIDGEADIGIATEALEGAVDLVSFPYYTWQHAIIVPVGHPLQS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +P+ITY +GR ++D+ F+ L P I + +++D+IKTYV+L +GI
Sbjct: 181 VYPLTLEAIAEFPIITYHHGMTGRFRIDQVFAKMGLIPDIAMSALDADVIKTYVKLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AF RD L + + +LF + + +++ +LR Y Y FI+L P LN I
Sbjct: 241 GIIASVAFSPERDTTLIKLDSEYLFEKNTTFISVRRNHFLRGYAYRFIELCMPTLNESII 300
Query: 301 NKILN 305
+N
Sbjct: 301 RSDVN 305
>gi|254785829|ref|YP_003073258.1| CysB family transcriptional regulator [Teredinibacter turnerae
T7901]
gi|242667509|gb|ACS93546.1| HTH-type transcriptional regulator CysB [Teredinibacter turnerae
T7901]
Length = 319
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 200/299 (66%)
Query: 7 RFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAI 66
R++ E N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T G+AI
Sbjct: 2 RYIWEVAHHELNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRITPAGEAI 61
Query: 67 LRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSL 126
LR+ I++++E +K++ +EFS G+L+IATTHTQARYALPK+I F ++P+V L +
Sbjct: 62 LRTAGEILRKVESIKQVAQEFSNERKGSLSIATTHTQARYALPKVISSFIDKYPEVALHM 121
Query: 127 LQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISL 186
QG P QI+EM + D AI TE L LI +PCY+W I+VP +HPL ++ +SL
Sbjct: 122 HQGTPMQISEMAADGSVDFAIATEALELFSDLIMLPCYRWNRCILVPRNHPLCQVSQLSL 181
Query: 187 KEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASI 246
++++ +P++TY F+GR KLD F + L P +V ++D+IKTYV L +GIGI+A +
Sbjct: 182 EDVAKHPIVTYVFGFTGRSKLDEAFMERGLAPKVVFTAADADVIKTYVRLGLGIGIVAKM 241
Query: 247 AFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINKILN 305
A+D + D +L ++ A HLF ++ +++ ++GT+LR ++Y FI+ +P L + + + N
Sbjct: 242 AYDEDVDTDLVALDARHLFRSSTTKIGFRRGTFLRGFMYEFIEEFAPHLTKDLVTEAFN 300
>gi|269968306|ref|ZP_06182329.1| transcriptional regulator for cysteine regulon [Vibrio
alginolyticus 40B]
gi|269827079|gb|EEZ81390.1| transcriptional regulator for cysteine regulon [Vibrio
alginolyticus 40B]
Length = 324
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDKVTISDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDGDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|307544326|ref|YP_003896805.1| CysB family transcriptional regulator [Halomonas elongata DSM 2581]
gi|307216350|emb|CBV41620.1| transcriptional regulator CysB [Halomonas elongata DSM 2581]
Length = 323
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R N N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVSRHNLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G++I+ +++ + +K + +E S G++ IATTHTQARYALP +I+EFT ++P
Sbjct: 61 PAGESIIELAGQVLRLTDNIKHVSQEHSDERRGSMAIATTHTQARYALPPVIREFTNRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P+QI +M+ + QAD AI TE L + L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMQQGTPRQIAQMVSDGQADFAICTESLDLFNDLVLLPCYRWNRCVLVPRGHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ PL+TY F+GR +LD F + L+P +VL +SD+IKTYV L MG+
Sbjct: 181 VEPLTLEALAEQPLVTYVFGFTGRSQLDDAFRSKGLSPNVVLTAADSDVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L ++ ASHLF ++ +++ I++GT++R Y+Y F+K + L R +
Sbjct: 241 GIVAHMAVDPEEDDDLVALDASHLFASSTTKIGIRRGTFMRGYMYDFLKGFAGHLERDLV 300
Query: 301 NKILN 305
L
Sbjct: 301 EAALE 305
>gi|83645436|ref|YP_433871.1| transcriptional regulator CysB [Hahella chejuensis KCTC 2396]
gi|83633479|gb|ABC29446.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 324
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I++ I+++++G+K+I +EFS G+L+IATTHTQARYALP II+ F ++P
Sbjct: 61 PAGETIIKVAGEILRKVDGIKQIAQEFSNQRKGDLSIATTHTQARYALPSIIRSFIQEYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L LI IPCY+W ++VP +HPL
Sbjct: 121 EVSLHMHQGTPMQIAEMAADGTVDFAIATEALEHFSDLIMIPCYRWNRCVVVPKNHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++ +P++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 KKKLEIEDVAAFPIVTYVFGFTGRSKLDEAFSEKGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A+D D +L ++ AS LF + +++ ++GT++R Y+Y FI+ +P L R+ +
Sbjct: 241 GIIARMAYDPVADSDLVALDASKLFRPSTTKIGFRRGTFIRGYMYEFIQRFAPHLTRELV 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|375131455|ref|YP_004993555.1| transcriptional regulator for cysteine regulon [Vibrio furnissii
NCTC 11218]
gi|315180629|gb|ADT87543.1| transcriptional regulator for cysteine regulon [Vibrio furnissii
NCTC 11218]
Length = 324
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 QAGEDIVRIATEILSRVESIKSVAGEHTHPEMGMLNISTTHTQARYALPEVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A AI TE L I +PCY W I+VP DH L
Sbjct: 121 KVSLHMHQGTPAQMSESIAKGSASFAIATEALHLYHDAIMLPCYHWNRAIVVPKDHSLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS++E++NYPL+TY FSGR +LD F LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDHISVEELANYPLVTYVFGFSGRSELDAAFHQVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D+ +D +L +I+ SH+FG + + + ++GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GLIASMAMDAIQDSDLVAINVSHIFGASTTSIGFRRGTFLRTYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 ERAIS 305
>gi|359781573|ref|ZP_09284797.1| transcriptional regulator CysB [Pseudomonas psychrotolerans L19]
gi|359370637|gb|EHK71204.1| transcriptional regulator CysB [Pseudomonas psychrotolerans L19]
Length = 324
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 196/306 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+++ I+++ E +K+I +EFS G L+IATTHTQARYALP +I EF Q+P
Sbjct: 61 PAGERIIQTAGEILRKCESIKQIAQEFSNERKGTLSIATTHTQARYALPDVISEFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L + L+ +PCY+W +IVP HPL
Sbjct: 121 DVALHMHQGSPTQIAEMAADGTVDFAIATEGLERFNDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ PL+TY F+GR KLD F+ Q L P +VL ++D+IKTYV L +G+
Sbjct: 181 VEHLTLEHLAEQPLVTYVFGFTGRSKLDEAFARQGLEPNVVLTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + ASHLF +++++ +++GT+LR ++ FI +P L R +
Sbjct: 241 GIVADMAVDHKADADLVCLDASHLFEASVTKIGLRRGTFLRGFMCDFIGRFAPHLTRDVL 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 TEAMQT 306
>gi|149192374|ref|ZP_01870576.1| transcriptional regulator for cysteine regulon [Vibrio shilonii
AK1]
gi|148833793|gb|EDL50828.1| transcriptional regulator for cysteine regulon [Vibrio shilonii
AK1]
Length = 324
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 TAGEDIIRISQEILSRVESIKAVAGEHTHPEMGTLNISTTHTQARYALPEVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL L
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I++++++ Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KPQITIEDLAAYSLVTYVFGFTGRSELDTAFNKVGLTPKVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASH+FG + + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAMDESQDTDLVAIDASHIFGASTTSIGFRKGTFLRSYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|91227575|ref|ZP_01261879.1| transcriptional regulator for cysteine regulon [Vibrio
alginolyticus 12G01]
gi|91188468|gb|EAS74761.1| transcriptional regulator for cysteine regulon [Vibrio
alginolyticus 12G01]
Length = 324
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDKVTISDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEEQDGDLIAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|188533756|ref|YP_001907553.1| transcriptional regulator CysB [Erwinia tasmaniensis Et1/99]
gi|188028798|emb|CAO96660.1| HTH-type transcriptional regulator CysB [Erwinia tasmaniensis
Et1/99]
Length = 324
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR +LD F+ LTP+IV ++D+IKTYV L +G+
Sbjct: 181 KSKVSIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPHIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEATDVFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|312172526|emb|CBX80782.1| HTH-type transcriptional regulator cysB [Erwinia amylovora ATCC
BAA-2158]
Length = 324
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RSKVSIEELAAYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEATEVFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|395649727|ref|ZP_10437577.1| transcriptional regulator CysB [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 324
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDATLDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|440738361|ref|ZP_20917895.1| transcriptional regulator CysB [Pseudomonas fluorescens BRIP34879]
gi|447915994|ref|YP_007396562.1| transcriptional regulator CysB [Pseudomonas poae RE*1-1-14]
gi|440381128|gb|ELQ17671.1| transcriptional regulator CysB [Pseudomonas fluorescens BRIP34879]
gi|445199857|gb|AGE25066.1| transcriptional regulator CysB [Pseudomonas poae RE*1-1-14]
Length = 324
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTQLDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|418480492|ref|ZP_13049550.1| transcriptional regulator CysB [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571884|gb|EIF02412.1| transcriptional regulator CysB [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 324
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGQDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEKVTIQDLASYPLVTYVFGFTGRSELDTAFNKYGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+FG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDQEQDTDLVAIDASHIFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|114320850|ref|YP_742533.1| transcriptional regulator CysB [Alkalilimnicola ehrlichii MLHE-1]
gi|114227244|gb|ABI57043.1| transcriptional regulator, LysR family [Alkalilimnicola ehrlichii
MLHE-1]
Length = 326
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 196/306 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L+Q R++ E ++ N++ AA A+YTSQPGVSK I LE+EL + IF R GK + +T
Sbjct: 1 MKLNQLRYISEVAKRGLNISAAADAMYTSQPGVSKQIRLLEDELGVQIFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL S + I+ E++ ++ I +F G+L+IATTHTQAR+ALP ++ +F ++P
Sbjct: 61 PAGRAILESADRILGEVQNIRSIAADFVDEQRGSLSIATTHTQARHALPPVVSQFRTRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM Q D AI TE L + L+ +PCY+W +IVP H L
Sbjct: 121 NVSLHIHQGTPMQIAEMAARGQVDFAIATEALELFEDLVMLPCYRWNRSVIVPEGHELAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PL+TY F+GR KLD F + L P +V +S++IKTYV L +G+
Sbjct: 181 VEPLTLEAIAEWPLVTYVFGFTGRSKLDEAFDARDLEPNVVFTATDSEVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA+++F+ RD+ L ++ A HLF +++ + ++G YLR Y+Y F++L +P L + +
Sbjct: 241 GIIATMSFEPERDQGLLALDAGHLFEDSVTNIGFRRGAYLRGYMYEFMELFAPHLTTEVV 300
Query: 301 NKILNN 306
+ L
Sbjct: 301 ERALQT 306
>gi|312959760|ref|ZP_07774276.1| regulatory protein, LysR [Pseudomonas fluorescens WH6]
gi|311285926|gb|EFQ64491.1| regulatory protein, LysR [Pseudomonas fluorescens WH6]
Length = 324
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTQLDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|37198246|dbj|BAC94082.1| cys regulon transcriptional activator [Vibrio vulnificus YJ016]
Length = 334
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 11 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 70
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK F ++P
Sbjct: 71 RAGEDIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFVKRYP 130
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL
Sbjct: 131 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAK 190
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 191 KEKVTIQDLASYPLVTYVFGFTGRSELDTAFNRVGLTPRVVFTATDADVIKTYVRMGIGV 250
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +DK+L SI ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 251 GVIASMAVDKEQDKDLVSIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 310
Query: 301 NKILN 305
+ ++
Sbjct: 311 EQAIS 315
>gi|408482901|ref|ZP_11189120.1| transcriptional regulator CysB [Pseudomonas sp. R81]
Length = 324
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTALDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|386286665|ref|ZP_10063852.1| transcriptional regulator CysB [gamma proteobacterium BDW918]
gi|385280237|gb|EIF44162.1| transcriptional regulator CysB [gamma proteobacterium BDW918]
Length = 324
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK I LE+EL +++F R+GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHEMNVSATAQSLFTSQPGISKQIRMLEDELGVEVFARNGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I+ + E +K I +EF G+L+IATTHTQARYALPK+IK F ++P
Sbjct: 61 PAGEAILKTAGEILYKTESIKHIAQEFKNPKKGSLSIATTHTQARYALPKVIKTFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+E+ N D AI TE L LI +PCY+W I+VP DHPL
Sbjct: 121 EVSLHMHQGTPMQISELAANFGVDFAIATEALELFSDLIMMPCYRWNRTILVPKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ +++++ +P++TY F+GR KLD F + L P +V ++D+IKTYV L +GI
Sbjct: 181 FKTLRIEDVALHPIVTYVFGFTGRSKLDEAFLNKGLEPRVVFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D +L ++ ASHLF ++++V ++GTY+R ++Y F++L +P L +
Sbjct: 241 GIVAEMAYDPVTDADLVALDASHLFEPSVTKVGFRRGTYMRKFMYDFVELFAPHLTPDLV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|27366230|ref|NP_761758.1| transcriptional regulator CysB [Vibrio vulnificus CMCP6]
gi|161486632|ref|NP_934111.2| transcriptional regulator CysB [Vibrio vulnificus YJ016]
gi|320156741|ref|YP_004189120.1| transcriptional regulator for cysteine regulon [Vibrio vulnificus
MO6-24/O]
gi|27362431|gb|AAO11285.1| Regulatory protein CysB [Vibrio vulnificus CMCP6]
gi|319932053|gb|ADV86917.1| transcriptional regulator for cysteine regulon [Vibrio vulnificus
MO6-24/O]
Length = 324
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK F ++P
Sbjct: 61 RAGEDIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEKVTIQDLASYPLVTYVFGFTGRSELDTAFNRVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +DK+L SI ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDKEQDKDLVSIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|423205161|ref|ZP_17191717.1| hypothetical protein HMPREF1168_01352 [Aeromonas veronii AMC34]
gi|404624244|gb|EKB21079.1| hypothetical protein HMPREF1168_01352 [Aeromonas veronii AMC34]
Length = 315
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 206/301 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REAVR+++NLTE A AL+TSQ GVS+ I ELEEEL I++FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREAVRRDYNLTEVANALFTSQSGVSRHIRELEEELGIELFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++K+ F+ D+G L +ATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILNDANNIRKLASTFANRDSGRLLVATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 LVQLELRQGSPEEIVRLVQTGEVDIGISSEQLDKSEGVVAFPYYRWHHNIVVPEQHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++N+P++TY +GR+++D F+ + P I+L +SD+IKTYVEL MG+
Sbjct: 181 ERDLTLAALANWPIVTYQAGLTGRVRVDEAFAAAGIEPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +AFD+ RD+ L + SHLF + + +KQG + ++ + FI+L +P+L R I
Sbjct: 241 GILADMAFDAQRDQGLVQLDGSHLFAPHTAWIGLKQGQFQHNFAWQFIQLCNPELARADI 300
Query: 301 N 301
Sbjct: 301 Q 301
>gi|156974082|ref|YP_001444989.1| transcriptional regulator CysB [Vibrio harveyi ATCC BAA-1116]
gi|156525676|gb|ABU70762.1| hypothetical protein VIBHAR_01793 [Vibrio harveyi ATCC BAA-1116]
Length = 324
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + L P +V ++D+IKTYV + +G+
Sbjct: 181 KDVVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLMPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDEDQDGDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|383935064|ref|ZP_09988502.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Rheinheimera nanhaiensis E407-8]
gi|383703829|dbj|GAB58593.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Rheinheimera nanhaiensis E407-8]
Length = 325
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 197/303 (65%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNHNLNVSSTAESLYTSQPGISKQVRMLEDELGIQVFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + I+ ++E +K + KE + D G L IATTHTQARYALP +I F ++P
Sbjct: 61 PAGREVIDIAQQILAKVESIKAVAKEHTLPDQGKLNIATTHTQARYALPPVISGFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P+QI+E AD AI TE L + L+ +PCY W +IV DHPLL
Sbjct: 121 KVSLHMHQGTPQQISEAASRGDADFAIATEALHLYNDLVMLPCYHWNRSVIVRQDHPLLQ 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L I++++++ +P++TY F+GR +LDR F+ + L P IV ++D+IKTYV L +G
Sbjct: 181 LGRKIAVEDVAQHPIVTYVFGFTGRSELDRAFAAKGLEPKIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D DK+L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L +
Sbjct: 241 VGVIASMAMDKELDKDLVAIDASHLFDASTTKIGFRKGAFLRTYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ K
Sbjct: 301 VEK 303
>gi|229589229|ref|YP_002871348.1| transcriptional regulator CysB [Pseudomonas fluorescens SBW25]
gi|229361095|emb|CAY47958.1| HTH-type transcriptional regulator [Pseudomonas fluorescens SBW25]
Length = 324
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 200/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I++F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIRDFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTALDKDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|330445612|ref|ZP_08309264.1| transcriptional regulator for cysteine regulon [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489803|dbj|GAA03761.1| transcriptional regulator for cysteine regulon [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 324
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT ++P
Sbjct: 61 PAGEDIVRISRDILSRVESIKAVAGEHTHPEMGTLNIATTHTQARYALPSVIQGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + ++D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPAQIADAVGKGRSDFAIATEALHLYQDMIMLPCYHWNRSIVVRSDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N+I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KNNITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASH+F + +++ K+G +LR+Y+Y F++ +P L R +
Sbjct: 241 GVIASMAMDPETDKDLVAIDASHIFAASTTKIGFKKGAFLRTYMYDFMERFAPHLTRNVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DQAI 304
>gi|292488383|ref|YP_003531265.1| HTH-type transcriptional regulator CysB [Erwinia amylovora
CFBP1430]
gi|292899579|ref|YP_003538948.1| cys regulon transcriptional activator [Erwinia amylovora ATCC
49946]
gi|428785325|ref|ZP_19002816.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
ACW56400]
gi|291199427|emb|CBJ46544.1| cys regulon transcriptional activator (LysR-family transcriptional
regulator) [Erwinia amylovora ATCC 49946]
gi|291553812|emb|CBA20857.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
CFBP1430]
gi|426276887|gb|EKV54614.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
ACW56400]
Length = 324
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RSKVSIEELAAYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEATDVFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|259908334|ref|YP_002648690.1| transcriptional regulator CysB [Erwinia pyrifoliae Ep1/96]
gi|385788470|ref|YP_005819579.1| transcriptional regulator CysB [Erwinia sp. Ejp617]
gi|387871188|ref|YP_005802561.1| HTH-type transcriptional regulator cysB [Erwinia pyrifoliae DSM
12163]
gi|224963956|emb|CAX55461.1| HTH-type transcriptional regulator CysB [Erwinia pyrifoliae Ep1/96]
gi|283478274|emb|CAY74190.1| HTH-type transcriptional regulator cysB [Erwinia pyrifoliae DSM
12163]
gi|310767742|gb|ADP12692.1| transcriptional regulator CysB [Erwinia sp. Ejp617]
Length = 324
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 SSKVSIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEATDVFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|424040273|ref|ZP_17778466.1| HTH-type transcriptional regulator CysB, partial [Vibrio cholerae
HENC-02]
gi|408892036|gb|EKM29661.1| HTH-type transcriptional regulator CysB, partial [Vibrio cholerae
HENC-02]
Length = 323
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 199/303 (65%)
Query: 3 LHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKP 62
L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 2 LQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPA 61
Query: 63 GQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKV 122
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++PKV
Sbjct: 62 GEEIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYPKV 121
Query: 123 KLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLN 182
L + QG P Q++E I A+ AI TE L I +PCY W I+VP +HPL +
Sbjct: 122 SLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKEHPLAKKD 181
Query: 183 SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGI 242
++++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+G+
Sbjct: 182 TVTIHDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGVGV 241
Query: 243 IASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
IAS+A D ++D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R + +
Sbjct: 242 IASMAVDEDQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVVEQ 301
Query: 303 ILN 305
++
Sbjct: 302 AIS 304
>gi|170720953|ref|YP_001748641.1| transcriptional regulator CysB [Pseudomonas putida W619]
gi|169758956|gb|ACA72272.1| transcriptional regulator, LysR family [Pseudomonas putida W619]
Length = 324
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A DS D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDSKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|448242414|ref|YP_007406467.1| O-acetyl-L-serine-binding transcriptional regulator [Serratia
marcescens WW4]
gi|445212778|gb|AGE18448.1| O-acetyl-L-serine-binding transcriptional regulator [Serratia
marcescens WW4]
gi|453065146|gb|EMF06109.1| transcriptional regulator CysB [Serratia marcescens VGH107]
gi|453065945|gb|EMF06903.1| transcriptional regulator CysB [Serratia marcescens VGH107]
Length = 324
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 194/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SIS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSSISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|336250742|ref|YP_004594452.1| transcriptional regulator CysB [Enterobacter aerogenes KCTC 2190]
gi|334736798|gb|AEG99173.1| transcriptional regulator CysB [Enterobacter aerogenes KCTC 2190]
Length = 324
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVEAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|119503217|ref|ZP_01625301.1| transcriptional regulator for cysteine regulon [marine gamma
proteobacterium HTCC2080]
gi|119460863|gb|EAW41954.1| transcriptional regulator for cysteine regulon [marine gamma
proteobacterium HTCC2080]
Length = 324
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ IL ++++ + +K++ +EFS +G L+IATTHTQARY LP IIK+F +P
Sbjct: 61 PAGEVILELAGEMLRKSDAIKRVAQEFSDETSGTLSIATTHTQARYVLPPIIKDFMSGYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM D AI TE L + L+ +PCY+W I+VP HPL
Sbjct: 121 NVSLQMQQGTPPQIAEMAAEGSVDFAIATEALQQFNSLVLLPCYRWNRCIVVPKGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ +P++TY F+GR KLD F + L P++V ++SD+IKTYV L +GI
Sbjct: 181 VERLTLEAVAEHPIVTYTFGFTGRSKLDDAFKSRGLVPHVVFTAVDSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A D + D++L ++ HLF ++++ + ++G++LR Y+Y FI+ L+P L R +
Sbjct: 241 GIIAGLAHDEDLDEDLVKLNVDHLFASSVTSLAFRKGSFLRGYMYDFIQALAPHLTRDIV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 VEALS 305
>gi|398952059|ref|ZP_10674521.1| transcriptional regulator [Pseudomonas sp. GM33]
gi|398155556|gb|EJM43995.1| transcriptional regulator [Pseudomonas sp. GM33]
Length = 324
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A DS D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDSKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|85712477|ref|ZP_01043526.1| Probable positive transcriptional regulator for cysteine regulon
[Idiomarina baltica OS145]
gi|85693755|gb|EAQ31704.1| Probable positive transcriptional regulator for cysteine regulon
[Idiomarina baltica OS145]
Length = 324
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 202/305 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNHNLNVSSTAESLFTSQPGISKQVRMLEDELGVQIFGRTGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ + ++++++ +K + E + D G L IATTHTQARYALPK+IK F Q+P
Sbjct: 61 PAGQEVIHIAQQVLEQVQAIKAVAAEHTQPDCGKLNIATTHTQARYALPKVIKRFIEQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG+P QI+E +AD AI TE L LI +PCY W IIVP DHPL+
Sbjct: 121 KVSLHMHQGSPTQISEAAAKGKADFAIATEALHLYQDLIMLPCYHWNRSIIVPKDHPLVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ +S+++I+ +P++TY F+GR +LD+ F+ P IV ++D+IKTYV + +GI
Sbjct: 181 IDKLSIQDIAQHPIVTYVHGFTGRSELDKAFNAAGEEPQIVFTATDADVIKTYVRMGIGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A+D+ D +L ++ A+HLF + +++ ++G++LR+Y++ FI+ +P L + +
Sbjct: 241 GVVATMAYDAEEDTDLVALPAAHLFEPSTTKIGFRRGSFLRTYMFDFIENFAPHLTKSRV 300
Query: 301 NKILN 305
+ +
Sbjct: 301 EEAMQ 305
>gi|444351063|ref|YP_007387207.1| Cys regulon transcriptional activator CysB [Enterobacter aerogenes
EA1509E]
gi|443901893|emb|CCG29667.1| Cys regulon transcriptional activator CysB [Enterobacter aerogenes
EA1509E]
Length = 363
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 40 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 99
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 100 PAGQEIIRIAREVLSKVEAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 159
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 160 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 219
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 220 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 279
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 280 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 339
Query: 301 N 301
+
Sbjct: 340 D 340
>gi|326795568|ref|YP_004313388.1| LysR family transcriptional regulator [Marinomonas mediterranea
MMB-1]
gi|326546332|gb|ADZ91552.1| transcriptional regulator, LysR family [Marinomonas mediterranea
MMB-1]
Length = 324
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 193/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPGVSK I LE+EL I++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGVSKQIRLLEDELGIEVFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ + + +KK+ KEFS G+L IATTHTQARYALPKII +F +P
Sbjct: 61 PAGEKIIELAGEILNQTQNIKKVAKEFSDERKGSLDIATTHTQARYALPKIIHDFIGGYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY W ++VP DHPL
Sbjct: 121 DVTLHMHQGTPMQIAEMANDGVVDFAIATEALELFGNLVMLPCYTWNRSVVVPKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++LKE++ +PL+TY F+GR +LD+ F +L P +V +SD+IKTYV L +G+
Sbjct: 181 TSKLTLKELAKFPLVTYVFGFTGRSQLDKAFQDAELDPNVVFTAADSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++A D D +L +I ASHLF + +++ I+ T++R Y+Y FI+ +P L I
Sbjct: 241 GIVATMAHDPKIDSDLVAIDASHLFEDSTTKIGIRNNTFIRGYMYKFIESFAPHLTPDLI 300
Query: 301 NKIL 304
+ +
Sbjct: 301 TEAM 304
>gi|152996363|ref|YP_001341198.1| transcriptional regulator CysB [Marinomonas sp. MWYL1]
gi|150837287|gb|ABR71263.1| transcriptional regulator, LysR family [Marinomonas sp. MWYL1]
Length = 335
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 193/300 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPGVSK I LE+EL +++F R GK + +T
Sbjct: 12 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGVSKQIRLLEDELGVEVFARSGKHLTHVT 71
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K++ KEFS G+L IATTHTQARYALPK+I +F +P
Sbjct: 72 PAGEKIIALAGEVLSQTQNIKRVAKEFSDERKGSLDIATTHTQARYALPKVINQFIEGYP 131
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY W ++VP DHPL
Sbjct: 132 DVSLHMHQGTPMQIAEMANDGLVDFAIATEALELFGNLVMLPCYTWNRSVVVPKDHPLAK 191
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+N ++L+ ++ YP++TY F+GR +LD+ F +L P +V +SD+IKTYV L +G+
Sbjct: 192 VNKLTLQALAEYPIVTYVFGFTGRSQLDQAFQEAELQPNVVFTAADSDVIKTYVRLGLGV 251
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A D +D +L ++ ASHLF + +++ I+ T++R Y+Y FI+ +P L + +
Sbjct: 252 GIVASMAHDEMQDADLVALDASHLFADSCTKIGIRSNTFIRGYMYKFIESFAPHLTKDVV 311
>gi|398846775|ref|ZP_10603730.1| transcriptional regulator [Pseudomonas sp. GM84]
gi|398252213|gb|EJN37415.1| transcriptional regulator [Pseudomonas sp. GM84]
Length = 324
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A DS D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDSKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|398993609|ref|ZP_10696553.1| transcriptional regulator [Pseudomonas sp. GM21]
gi|398134492|gb|EJM23648.1| transcriptional regulator [Pseudomonas sp. GM21]
Length = 324
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 199/305 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L++++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSTLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDAKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|148548651|ref|YP_001268753.1| transcriptional regulator CysB [Pseudomonas putida F1]
gi|395444279|ref|YP_006384532.1| transcriptional regulator CysB [Pseudomonas putida ND6]
gi|397698087|ref|YP_006535970.1| transcriptional regulator CysB [Pseudomonas putida DOT-T1E]
gi|421521966|ref|ZP_15968615.1| transcriptional regulator CysB [Pseudomonas putida LS46]
gi|148512709|gb|ABQ79569.1| transcriptional regulator, LysR family [Pseudomonas putida F1]
gi|388558276|gb|AFK67417.1| transcriptional regulator CysB [Pseudomonas putida ND6]
gi|397334817|gb|AFO51176.1| transcriptional regulator CysB [Pseudomonas putida DOT-T1E]
gi|402754227|gb|EJX14712.1| transcriptional regulator CysB [Pseudomonas putida LS46]
Length = 324
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAGMAVDAKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|383814125|ref|ZP_09969547.1| transcriptional regulator CysB-like protein [Serratia sp. M24T3]
gi|383296898|gb|EIC85210.1| transcriptional regulator CysB-like protein [Serratia sp. M24T3]
Length = 320
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 202/303 (66%), Gaps = 3/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE + L+TSQ GVS+ I ELE+EL ++IFIR GKR+ GLT
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVSNMLFTSQSGVSRHIRELEDELGVEIFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ E + ++++ FS D G LTIATTHTQARY+LP++IK F +P
Sbjct: 61 EPGKELLAVAERILNEAQNIRRLADIFSKEDAGVLTIATTHTQARYSLPRVIKAFRAVYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P+++ M+ + QAD+AI +E L + S P Y+W + I+VP HPLL
Sbjct: 121 AVRLELHQGSPQEVLAMLLSGQADVAIASEKLISDPSVASFPYYRWHHAILVPDGHPLLE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ Y L+TY +GR ++D F Q L P IVL +SD+IKTYVEL +G+
Sbjct: 181 QQPLTLEHLNQYSLVTYRQGITGRSRVDSAFEQQGLNPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A AFD +RD+ L+ I+A HLF + + +K+ R+YV+ FI+L + L+ I
Sbjct: 241 GILADKAFDPDRDRGLQLINAEHLFESNTVWLGLKRAQLQRNYVWRFIELCNQSLS---I 297
Query: 301 NKI 303
N+I
Sbjct: 298 NEI 300
>gi|398915332|ref|ZP_10657293.1| transcriptional regulator [Pseudomonas sp. GM49]
gi|398176494|gb|EJM64207.1| transcriptional regulator [Pseudomonas sp. GM49]
Length = 324
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A DS D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDSKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|26989051|ref|NP_744476.1| transcriptional regulator CysB [Pseudomonas putida KT2440]
gi|167032936|ref|YP_001668167.1| transcriptional regulator CysB [Pseudomonas putida GB-1]
gi|386012883|ref|YP_005931160.1| CysB [Pseudomonas putida BIRD-1]
gi|24983877|gb|AAN67940.1|AE016426_5 transcriptional regulator CysB [Pseudomonas putida KT2440]
gi|166859424|gb|ABY97831.1| transcriptional regulator, LysR family [Pseudomonas putida GB-1]
gi|193072555|dbj|BAG50002.1| regulatory protein CysB [Pseudomonas putida]
gi|313499589|gb|ADR60955.1| CysB [Pseudomonas putida BIRD-1]
Length = 324
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAGMAVDAKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|254508470|ref|ZP_05120589.1| transcriptional regulator for cysteine regulon [Vibrio
parahaemolyticus 16]
gi|219548582|gb|EED25588.1| transcriptional regulator for cysteine regulon [Vibrio
parahaemolyticus 16]
Length = 324
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++++++Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDQVTIQDLASYSLVTYVFGFTGRSELDAAFNKHGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+FG + + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAIDKEQDTDLVAIDASHIFGASTTSIGFRRGTFLRSYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|304311317|ref|YP_003810915.1| transcriptional regulator [gamma proteobacterium HdN1]
gi|301797050|emb|CBL45263.1| Transcriptional regulator [gamma proteobacterium HdN1]
Length = 323
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 203/302 (67%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A+ LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSVTAQNLYTSQPGISKQIRLLEDELGVEVFSRSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ILR I++++E +K++ +EFS G+L+IATTHTQARYALPK+I++F +FP
Sbjct: 61 PAGEEILRISGEILRKVENIKQVAQEFSDETKGSLSIATTHTQARYALPKVIQDFIGRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI+EM + D AI TE L LI +PCY W +IVP DHPL
Sbjct: 121 EVALHMHQGSPVQISEMAADGTVDFAIATEALELFGDLIMMPCYIWNRAVIVPKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L++I+ P++TY F+GR +LD F LTP +V ++D+IKTYV L +G+
Sbjct: 181 VSKLTLEDIARQPIVTYTFGFTGRSRLDDAFMNAGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + + D+ L + ASHLF +++++ ++GT+LR ++Y FI+L +P L + +
Sbjct: 241 GIVARMACNDD-DEGLVVLDASHLFAPSVTKIGFRKGTFLRGFMYDFIELFAPHLTKDVV 299
Query: 301 NK 302
++
Sbjct: 300 DE 301
>gi|395236160|ref|ZP_10414358.1| transcriptional regulator CysB [Enterobacter sp. Ag1]
gi|394729012|gb|EJF29023.1| transcriptional regulator CysB [Enterobacter sp. Ag1]
Length = 324
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KESVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPISDPDLVRIEAQGVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|338740228|ref|YP_004677190.1| HTH-type transcriptional regulator cbl [Hyphomicrobium sp. MC1]
gi|337760791|emb|CCB66624.1| HTH-type transcriptional regulator cbl [Hyphomicrobium sp. MC1]
Length = 322
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE +R FN+TE A A+Y SQ GVSK I ELEEEL +FIR GKR+ GLT
Sbjct: 1 MNFQQLRILRETIRYKFNITEVANAIYVSQSGVSKQIRELEEELGSSLFIRRGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G + R E ++ E E +K+ +FS D G L +ATTHTQARY LP+II +F +FP
Sbjct: 61 DLGAQVARIAERVLFEAENIKQAAAQFSTQDKGVLQVATTHTQARYVLPEIIVKFKEKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L Q NP+ I+ ++ ADI I T + +D++I+ P Y WE+++I P HPL
Sbjct: 121 DVRLDLRQSNPRDISSLLLASDADIGIATGVFGSNDEIITFPFYSWEHIVIAPAGHPLES 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++SL E++ +PLITY+ +GR +D F ++P I + +++D+IK YVE +GI
Sbjct: 181 KRAVSLYELAQFPLITYESGITGRPHIDEAFEKAGISPNITITALDADVIKAYVEWGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A+D NRD NLR I +F ++S + I++G R +VY FI+L +P++ I
Sbjct: 241 GIIAPMAYDENRDHNLRMIDTVKVFSPSMSSIAIRRGRLQRGFVYRFIELCAPQVTEDDI 300
Query: 301 NK 302
+
Sbjct: 301 RE 302
>gi|377578996|ref|ZP_09807969.1| cys regulon transcriptional activator [Escherichia hermannii NBRC
105704]
gi|377539645|dbj|GAB53134.1| cys regulon transcriptional activator [Escherichia hermannii NBRC
105704]
Length = 324
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 193/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD FS LTP IV ++D+IKTYV L +G+
Sbjct: 181 KESVTIEELAQYPLVTYTFGFTGRSELDTAFSRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPIADPDLVRLDAHEIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAVS 305
>gi|325274321|ref|ZP_08140428.1| transcriptional regulator CysB [Pseudomonas sp. TJI-51]
gi|324100543|gb|EGB98282.1| transcriptional regulator CysB [Pseudomonas sp. TJI-51]
Length = 324
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYKWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAGMAVDAKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|89074064|ref|ZP_01160565.1| transcriptional regulator for cysteine regulon [Photobacterium sp.
SKA34]
gi|89050202|gb|EAR55713.1| transcriptional regulator for cysteine regulon [Photobacterium sp.
SKA34]
Length = 324
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT ++P
Sbjct: 61 PAGEEIVRISRDILSRVESIKAVAGEHTHPEMGTLNIATTHTQARYALPSVIQGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + ++D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVGKGRSDFAIATEALHLYQDMIMLPCYHWNRSIVVRSDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTNITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASH+F + +++ K+GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GVIASMAMDPETDKDLVAIDASHIFEASTTKIGFKKGTFLRTYMYDFMERFAPHLTRNVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DQAI 304
>gi|397171742|ref|ZP_10495140.1| transcriptional regulator CysB [Alishewanella aestuarii B11]
gi|396086460|gb|EJI84072.1| transcriptional regulator CysB [Alishewanella aestuarii B11]
Length = 325
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 197/303 (65%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK I LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVMNHNLNVSSTAESLYTSQPGISKQIRMLEDELGIQVFGRSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + I+ ++E +K I +E + D G L IATTHTQARYALP +I+ F +FP
Sbjct: 61 PAGREVIDIAQQILAKVENIKAIAREHTLPDQGKLNIATTHTQARYALPPVIRTFMQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P+QI+E AD AI TE L L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGSPQQISEAASRGDADFAIATEALHLYGDLVMLPCYHWNRSIIVRKDHPLTQ 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L S + +++++ +P++TY F+GR +LDR F+ +L P IV ++D+IKTYV L +G
Sbjct: 181 LTSKVQIEDVARFPIVTYVFGFTGRSELDRAFAAHQLEPQIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D D++L +I ASHLF + +++ ++G +LRSY+Y FI+ +P L +
Sbjct: 241 VGVIASMAIDPQLDQDLVAIDASHLFEASTTKIGFRKGAFLRSYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|383814085|ref|ZP_09969508.1| transcriptional regulator CysB [Serratia sp. M24T3]
gi|383297283|gb|EIC85594.1| transcriptional regulator CysB [Serratia sp. M24T3]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVQPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+++YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KEKVTIEELASYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLQDPDLVTVDASDIFTHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 DSAI 304
>gi|300716942|ref|YP_003741745.1| HTH-type transcriptional regulator [Erwinia billingiae Eb661]
gi|299062778|emb|CAX59898.1| HTH-type transcriptional regulator [Erwinia billingiae Eb661]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAKVSIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEATDVFSFSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|398840049|ref|ZP_10597288.1| transcriptional regulator [Pseudomonas sp. GM102]
gi|398861937|ref|ZP_10617551.1| transcriptional regulator [Pseudomonas sp. GM79]
gi|398902151|ref|ZP_10650839.1| transcriptional regulator [Pseudomonas sp. GM50]
gi|399002657|ref|ZP_10705340.1| transcriptional regulator [Pseudomonas sp. GM18]
gi|398111380|gb|EJM01266.1| transcriptional regulator [Pseudomonas sp. GM102]
gi|398124572|gb|EJM14080.1| transcriptional regulator [Pseudomonas sp. GM18]
gi|398178998|gb|EJM66627.1| transcriptional regulator [Pseudomonas sp. GM50]
gi|398231551|gb|EJN17538.1| transcriptional regulator [Pseudomonas sp. GM79]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|323498297|ref|ZP_08103299.1| transcriptional regulator CysB [Vibrio sinaloensis DSM 21326]
gi|323316725|gb|EGA69734.1| transcriptional regulator CysB [Vibrio sinaloensis DSM 21326]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKGHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEQVTIQDLASYSLVTYVFGFTGRSELDAAFNQHGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+FG + + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAIDKEQDTDLVAIDASHIFGASTTSIGFRRGTFLRSYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|293395943|ref|ZP_06640224.1| LysR family transcriptional regulator CysB [Serratia odorifera DSM
4582]
gi|291421441|gb|EFE94689.1| LysR family transcriptional regulator CysB [Serratia odorifera DSM
4582]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVEAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSQITIEELAEYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|90581230|ref|ZP_01237028.1| transcriptional regulator for cysteine regulon [Photobacterium
angustum S14]
gi|90437601|gb|EAS62794.1| transcriptional regulator for cysteine regulon [Vibrio angustum
S14]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT ++P
Sbjct: 61 PAGEEIVRISRDILSRVESIKAVAGEHTHPEMGTLNIATTHTQARYALPSVIQGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + ++D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVGKGRSDFAIATEALHLYQDMIMLPCYHWNRSIVVRSDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTNITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASH+F + +++ K+GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GVIASMAMDPETDKDLVAIDASHIFEASTTKIGFKKGTFLRTYMYDFMERFAPHLTRNVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DQAI 304
>gi|339486830|ref|YP_004701358.1| transcriptional regulator CysB [Pseudomonas putida S16]
gi|431801834|ref|YP_007228737.1| transcriptional regulator CysB [Pseudomonas putida HB3267]
gi|338837673|gb|AEJ12478.1| transcriptional regulator CysB [Pseudomonas putida S16]
gi|430792599|gb|AGA72794.1| transcriptional regulator CysB [Pseudomonas putida HB3267]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L ++ AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVALDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|440231064|ref|YP_007344857.1| transcriptional regulator [Serratia marcescens FGI94]
gi|440052769|gb|AGB82672.1| transcriptional regulator [Serratia marcescens FGI94]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVEAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHITIEELAEYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDVFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|16760167|ref|NP_455784.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142062|ref|NP_805404.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194445304|ref|YP_002040966.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|213162272|ref|ZP_03347982.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213424429|ref|ZP_03357242.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213647990|ref|ZP_03378043.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213852107|ref|ZP_03381639.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|417518130|ref|ZP_12180550.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|418788192|ref|ZP_13343987.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418792451|ref|ZP_13348196.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797930|ref|ZP_13353610.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418809251|ref|ZP_13364803.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813406|ref|ZP_13368927.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418817510|ref|ZP_13372997.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821818|ref|ZP_13377233.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418830492|ref|ZP_13385454.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418837661|ref|ZP_13392533.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418840354|ref|ZP_13395183.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418845198|ref|ZP_13399984.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418851180|ref|ZP_13405894.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854222|ref|ZP_13408901.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860451|ref|ZP_13415030.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418863282|ref|ZP_13417820.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866898|ref|ZP_13421359.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|25301166|pir||AG0654 cys regulon transcription activator STY1337 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502461|emb|CAD08418.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137691|gb|AAO69253.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|194403967|gb|ACF64189.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|353649845|gb|EHC92370.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|392763100|gb|EJA19908.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392767499|gb|EJA24263.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392768245|gb|EJA25002.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392773336|gb|EJA30032.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392774632|gb|EJA31327.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392788499|gb|EJA45028.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392788585|gb|EJA45113.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392798396|gb|EJA54673.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392801830|gb|EJA58052.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392810844|gb|EJA66856.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392814007|gb|EJA69971.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392818113|gb|EJA74009.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392825015|gb|EJA80773.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392827179|gb|EJA82897.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392833150|gb|EJA88765.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840010|gb|EJA95548.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 324
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SI+++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLTDPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|441502274|ref|ZP_20984285.1| Cys regulon transcriptional activator CysB [Photobacterium sp.
AK15]
gi|441430021|gb|ELR67472.1| Cys regulon transcriptional activator CysB [Photobacterium sp.
AK15]
Length = 328
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 192/305 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 5 MKLQQLRYIVEVVNHNLNVSSTAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTKVT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L IATTHTQARYALP +I+ FT ++P
Sbjct: 65 SAGEDIVRISRDILSRVESIKSVAGEHTHPEMGTLNIATTHTQARYALPSVIQGFTARYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + D AI TE L +I +PCY W I+V DHPL
Sbjct: 125 KVSLHMHQGTPSQIADAVAKGTTDFAIATEALHLYQDMIMLPCYHWNRSIVVKADHPLAK 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 185 KSEITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPRIVFTATDADVIKTYVRLGIGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L +I ASH+F + +++ K+GT+LRSY+Y F++ +P L R +
Sbjct: 245 GVIASMAMDPATDSDLVAIDASHIFDASTTKIGFKKGTFLRSYMYDFMERFAPHLTRNVV 304
Query: 301 NKILN 305
++ +
Sbjct: 305 DQAVG 309
>gi|398924923|ref|ZP_10661530.1| transcriptional regulator [Pseudomonas sp. GM48]
gi|398172804|gb|EJM60659.1| transcriptional regulator [Pseudomonas sp. GM48]
Length = 324
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDAKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|417333522|ref|ZP_12117032.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353578158|gb|EHC40095.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 324
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLTDPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|398871534|ref|ZP_10626848.1| transcriptional regulator [Pseudomonas sp. GM74]
gi|398206090|gb|EJM92863.1| transcriptional regulator [Pseudomonas sp. GM74]
Length = 324
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|398938439|ref|ZP_10667842.1| transcriptional regulator [Pseudomonas sp. GM41(2012)]
gi|398165987|gb|EJM54097.1| transcriptional regulator [Pseudomonas sp. GM41(2012)]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDAKLDSDLVMLDASDLFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|88800072|ref|ZP_01115642.1| Transcriptional regulator [Reinekea blandensis MED297]
gi|88777198|gb|EAR08403.1| Transcriptional regulator [Reinekea blandensis MED297]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 198/304 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N++ A+ LYTSQPG+SK I LE+EL I+IF R GK + +T
Sbjct: 1 MKLQQLKYIWEVAHHDLNVSATAQVLYTSQPGISKQIRLLEDELGIEIFARSGKHLTRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+A+L+ I+ +++ +K+I +E+S G+L+IATTHTQARYALP +I+ F +P
Sbjct: 61 PAGEAVLKVAGEILGKVDSIKQIAQEYSNDKKGSLSIATTHTQARYALPNVIEGFIHDYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D+AI TE + L+ +PCY+W I+VP DHPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDMAIATEGMDHFSDLVMMPCYRWNRSIVVPRDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L ++++YP++TY F+GR KLD F + L P +V ++D+IKTYV L +G+
Sbjct: 181 KGTLTLDDVASYPIVTYVFGFTGRSKLDDAFIDKDLKPRVVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D++L SI ASHLF +I+++ +++GT+LR + Y FI+ +P L + I
Sbjct: 241 GILAHMAIDPETDRDLVSIDASHLFEASITKIGMRKGTFLRGFQYRFIERFAPHLTKAVI 300
Query: 301 NKIL 304
+ +
Sbjct: 301 EEAM 304
>gi|437762848|ref|ZP_20834874.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435308668|gb|ELO83591.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
Length = 302
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|365538369|ref|ZP_09363544.1| transcriptional regulator CysB [Vibrio ordalii ATCC 33509]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 195/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEDIIRISQEILSRVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+VP DH L
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHALAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++ YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KERVTIEDLAAYPLVTYVFGFTGRSELDTAFNRVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +RD +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDKSRDTDLIAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NK 302
+
Sbjct: 301 ER 302
>gi|388544888|ref|ZP_10148174.1| transcriptional regulator CysB [Pseudomonas sp. M47T1]
gi|388277197|gb|EIK96773.1| transcriptional regulator CysB [Pseudomonas sp. M47T1]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEVLAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + A HLF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVMLDADHLFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|200390243|ref|ZP_03216854.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|417373103|ref|ZP_12143210.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|199602688|gb|EDZ01234.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|353603378|gb|EHC58491.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SI+++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|16765057|ref|NP_460672.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167549781|ref|ZP_02343539.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167993765|ref|ZP_02574858.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230149|ref|ZP_02655207.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168241289|ref|ZP_02666221.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260068|ref|ZP_02682041.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462815|ref|ZP_02696746.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168819533|ref|ZP_02831533.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194449730|ref|YP_002045759.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472369|ref|ZP_03078353.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197249782|ref|YP_002146314.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197262598|ref|ZP_03162672.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205352613|ref|YP_002226414.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856774|ref|YP_002243425.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238911895|ref|ZP_04655732.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375123427|ref|ZP_09768591.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378445124|ref|YP_005232756.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378450277|ref|YP_005237636.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699593|ref|YP_005181550.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378984278|ref|YP_005247433.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989055|ref|YP_005252219.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379700886|ref|YP_005242614.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496409|ref|YP_005397098.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|409249960|ref|YP_006885773.1| HTH-type transcriptional regulator cysB Cys regulon transcriptional
activator [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|417341570|ref|ZP_12122584.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417400658|ref|ZP_12157444.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417539100|ref|ZP_12191477.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418764127|ref|ZP_13320230.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418767013|ref|ZP_13323082.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418772825|ref|ZP_13328828.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418776950|ref|ZP_13332887.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418780797|ref|ZP_13336686.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784013|ref|ZP_13339855.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418801777|ref|ZP_13357410.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419729748|ref|ZP_14256705.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419732313|ref|ZP_14259219.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419740148|ref|ZP_14266882.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419744656|ref|ZP_14271310.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419748695|ref|ZP_14275187.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419787198|ref|ZP_14312911.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419791883|ref|ZP_14317528.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358840|ref|ZP_15809137.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364319|ref|ZP_15814552.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368010|ref|ZP_15818203.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421371467|ref|ZP_15821625.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421376677|ref|ZP_15826776.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421381178|ref|ZP_15831233.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421387850|ref|ZP_15837849.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421390815|ref|ZP_15840790.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421394843|ref|ZP_15844782.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421400448|ref|ZP_15850334.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421403687|ref|ZP_15853531.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421406576|ref|ZP_15856390.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421412925|ref|ZP_15862679.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421415904|ref|ZP_15865625.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421912|ref|ZP_15871580.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421426849|ref|ZP_15876477.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421429406|ref|ZP_15879002.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421435428|ref|ZP_15884965.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421441136|ref|ZP_15890606.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421444996|ref|ZP_15894426.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450306|ref|ZP_15899681.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421572393|ref|ZP_16018043.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573936|ref|ZP_16019564.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581674|ref|ZP_16027217.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421586881|ref|ZP_16032362.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421885863|ref|ZP_16317046.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025891|ref|ZP_16372312.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030924|ref|ZP_16377110.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427549882|ref|ZP_18927619.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427565655|ref|ZP_18932341.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427585674|ref|ZP_18937125.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427608822|ref|ZP_18941989.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427633140|ref|ZP_18946885.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427655944|ref|ZP_18951651.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427661084|ref|ZP_18956559.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427667910|ref|ZP_18961359.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427763800|ref|ZP_18966506.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436635084|ref|ZP_20515734.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436801572|ref|ZP_20525031.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436808661|ref|ZP_20528041.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436815581|ref|ZP_20533132.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436845004|ref|ZP_20538762.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851171|ref|ZP_20541770.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436857935|ref|ZP_20546455.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865111|ref|ZP_20551078.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436870381|ref|ZP_20554152.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436882234|ref|ZP_20561254.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887979|ref|ZP_20564308.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896233|ref|ZP_20568989.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906210|ref|ZP_20575056.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911842|ref|ZP_20577671.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436921775|ref|ZP_20584000.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436927485|ref|ZP_20587311.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436935794|ref|ZP_20591234.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942984|ref|ZP_20595930.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436951525|ref|ZP_20600580.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436961146|ref|ZP_20604520.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436971258|ref|ZP_20609651.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436983140|ref|ZP_20613729.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991706|ref|ZP_20617717.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437006722|ref|ZP_20622773.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437024372|ref|ZP_20629581.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437029760|ref|ZP_20630942.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041073|ref|ZP_20635140.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437053189|ref|ZP_20642387.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437058315|ref|ZP_20645162.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437070863|ref|ZP_20652041.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437076005|ref|ZP_20654368.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437085488|ref|ZP_20660092.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437087979|ref|ZP_20661372.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437099903|ref|ZP_20665845.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437118677|ref|ZP_20670479.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437130610|ref|ZP_20676740.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437140703|ref|ZP_20682702.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437148093|ref|ZP_20687284.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437150569|ref|ZP_20688766.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437162249|ref|ZP_20695908.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167174|ref|ZP_20698492.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437179902|ref|ZP_20705670.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437181094|ref|ZP_20706314.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437261370|ref|ZP_20718440.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267768|ref|ZP_20721401.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437275882|ref|ZP_20726108.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437296364|ref|ZP_20732453.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437308214|ref|ZP_20735255.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437333863|ref|ZP_20742635.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437347397|ref|ZP_20747157.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437420936|ref|ZP_20754710.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437438859|ref|ZP_20757024.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437465813|ref|ZP_20764310.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437478311|ref|ZP_20767324.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437496433|ref|ZP_20773231.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437507809|ref|ZP_20776127.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437539422|ref|ZP_20782190.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437553428|ref|ZP_20784012.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437578799|ref|ZP_20791489.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437582792|ref|ZP_20792441.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437606540|ref|ZP_20799938.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437620640|ref|ZP_20804223.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437635702|ref|ZP_20807152.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437656793|ref|ZP_20810934.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437676224|ref|ZP_20816910.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437697628|ref|ZP_20823003.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437701847|ref|ZP_20824064.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437727365|ref|ZP_20830246.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437809378|ref|ZP_20840662.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438083348|ref|ZP_20858172.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438097727|ref|ZP_20862551.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438112242|ref|ZP_20868839.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|440762907|ref|ZP_20941956.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440768070|ref|ZP_20947044.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440774520|ref|ZP_20953407.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445132761|ref|ZP_21382347.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445173998|ref|ZP_21396861.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445208620|ref|ZP_21401411.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445235944|ref|ZP_21407008.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445246019|ref|ZP_21408253.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445330151|ref|ZP_21413770.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445347066|ref|ZP_21419037.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445364676|ref|ZP_21425006.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|118131|sp|P06614.1|CYSB_SALTY RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|153927|gb|AAA27045.1| cysB regulatory protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16420243|gb|AAL20631.1| transcriptional regulator for cysteine regulon [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|194408034|gb|ACF68253.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194458733|gb|EDX47572.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|195634558|gb|EDX52910.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213485|gb|ACH50882.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197240853|gb|EDY23473.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205272394|emb|CAR37274.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205325067|gb|EDZ12906.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205328284|gb|EDZ15048.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335560|gb|EDZ22324.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339414|gb|EDZ26178.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343792|gb|EDZ30556.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350846|gb|EDZ37477.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708577|emb|CAR32898.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261246903|emb|CBG24720.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267993655|gb|ACY88540.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158241|emb|CBW17740.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912706|dbj|BAJ36680.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085788|emb|CBY95564.1| HTH-type transcriptional regulator cysB Cys regulon transcriptional
activator [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323129985|gb|ADX17415.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326627677|gb|EGE34020.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332988602|gb|AEF07585.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353629643|gb|EHC77405.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353665143|gb|EHD03370.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|357957713|gb|EHJ82650.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|379984502|emb|CCF89319.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380463230|gb|AFD58633.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381296195|gb|EIC37302.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381296706|gb|EIC37810.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381303162|gb|EIC44191.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381308349|gb|EIC49193.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381313279|gb|EIC54066.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|392619850|gb|EIX02228.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392620038|gb|EIX02408.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392730475|gb|EIZ87716.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392731952|gb|EIZ89175.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392735649|gb|EIZ92820.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392745289|gb|EJA02324.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392749847|gb|EJA06824.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392755842|gb|EJA12744.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392779981|gb|EJA36644.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|395984475|gb|EJH93662.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986530|gb|EJH95694.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395987280|gb|EJH96443.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|396000299|gb|EJI09313.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396001141|gb|EJI10153.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396002763|gb|EJI11752.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396008675|gb|EJI17609.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396013580|gb|EJI22467.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396014625|gb|EJI23511.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396023281|gb|EJI32080.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396026767|gb|EJI35531.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396033748|gb|EJI42454.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396040013|gb|EJI48637.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396041227|gb|EJI49850.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046008|gb|EJI54597.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396054356|gb|EJI62849.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396056697|gb|EJI65171.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396058287|gb|EJI66750.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396064739|gb|EJI73122.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396066554|gb|EJI74915.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396067427|gb|EJI75787.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|402517301|gb|EJW24705.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402517508|gb|EJW24908.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402526179|gb|EJW33456.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402528280|gb|EJW35538.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414019056|gb|EKT02682.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414019645|gb|EKT03247.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414021523|gb|EKT05064.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414033286|gb|EKT16245.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414035089|gb|EKT17988.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414038110|gb|EKT20835.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414047954|gb|EKT30214.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414049526|gb|EKT31732.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414053918|gb|EKT35885.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414059975|gb|EKT41508.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414065497|gb|EKT46229.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434957990|gb|ELL51577.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434958890|gb|ELL52404.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434966478|gb|ELL59313.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434973697|gb|ELL66085.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434979590|gb|ELL71582.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986473|gb|ELL78124.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990087|gb|ELL81637.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434996146|gb|ELL87462.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435002122|gb|ELL93203.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435003806|gb|ELL94812.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435009689|gb|ELM00475.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435014787|gb|ELM05344.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016122|gb|ELM06648.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435024093|gb|ELM14299.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435026087|gb|ELM16218.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435037326|gb|ELM27145.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435038632|gb|ELM28413.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435043183|gb|ELM32900.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435050285|gb|ELM39789.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435051992|gb|ELM41494.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435057547|gb|ELM46916.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435065578|gb|ELM54683.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435068283|gb|ELM57312.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435069638|gb|ELM58637.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435074179|gb|ELM63034.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435082794|gb|ELM71405.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435086968|gb|ELM75496.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435089572|gb|ELM77997.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435090834|gb|ELM79236.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435094128|gb|ELM82467.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435104762|gb|ELM92801.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435105302|gb|ELM93339.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435117350|gb|ELN05061.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435124584|gb|ELN12040.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435125442|gb|ELN12884.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435130218|gb|ELN17476.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435131847|gb|ELN19052.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133549|gb|ELN20716.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435143204|gb|ELN30072.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435145813|gb|ELN32622.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435149669|gb|ELN36363.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435151796|gb|ELN38435.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435163826|gb|ELN49962.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435166829|gb|ELN52788.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435174081|gb|ELN59538.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435175256|gb|ELN60674.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435179755|gb|ELN64896.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435185809|gb|ELN70665.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435187549|gb|ELN72308.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435188611|gb|ELN73301.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201016|gb|ELN84967.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435212855|gb|ELN95806.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435216237|gb|ELN98713.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435221130|gb|ELO03403.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435226114|gb|ELO07707.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435233649|gb|ELO14627.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435237996|gb|ELO18650.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241773|gb|ELO22104.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435244632|gb|ELO24809.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435254526|gb|ELO33911.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435257436|gb|ELO36727.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435263935|gb|ELO42965.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435271707|gb|ELO50151.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435275916|gb|ELO53958.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435276919|gb|ELO54907.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435280509|gb|ELO58218.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435291351|gb|ELO68172.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435295149|gb|ELO71676.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435299288|gb|ELO75446.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435320050|gb|ELO92774.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435326884|gb|ELO98666.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435330320|gb|ELP01586.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|436412743|gb|ELP10681.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436418575|gb|ELP16458.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436421657|gb|ELP19501.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|444848405|gb|ELX73530.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444859429|gb|ELX84375.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444859539|gb|ELX84484.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444860967|gb|ELX85864.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444877355|gb|ELY01503.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444878303|gb|ELY02425.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444883168|gb|ELY07070.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444890359|gb|ELY13701.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|426408333|ref|YP_007028432.1| transcriptional regulator CysB [Pseudomonas sp. UW4]
gi|426266550|gb|AFY18627.1| transcriptional regulator CysB [Pseudomonas sp. UW4]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|308187002|ref|YP_003931133.1| HTH-type transcriptional regulator cysB [Pantoea vagans C9-1]
gi|308057512|gb|ADO09684.1| HTH-type transcriptional regulator cysB [Pantoea vagans C9-1]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTADHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGQVSIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLIRIEAADIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|88703388|ref|ZP_01101104.1| LysR-family transcriptional regulator [Congregibacter litoralis
KT71]
gi|88702102|gb|EAQ99205.1| LysR-family transcriptional regulator [Congregibacter litoralis
KT71]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 195/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ IL + +++++E +K + +E+S G L+IATTHTQARY LP +I+ F ++P
Sbjct: 61 PAGQVILETAGEVLRKVESIKHVAQEYSDEKRGALSIATTHTQARYVLPDVIRSFIGKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+EM + D AI TE L LI +PCY+W +IVP DH L
Sbjct: 121 EVSLHMNQGTPMQISEMAADGTVDFAIATEALELFSDLIMMPCYRWNRCVIVPRDHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ +SL++++ +P++TY F+GR +LD F LTP +V ++D+IKTYV L +GI
Sbjct: 181 VSRLSLEDVAAHPIVTYVFGFTGRSRLDDAFVTAGLTPRVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L ++ A HLF ++++ + ++GT+LR Y+Y FI+ +P L+R +
Sbjct: 241 GIVADMAHDEEIDDDLVALDARHLFASSVTSIGCRKGTFLRGYMYDFIEDFAPHLSRDLV 300
Query: 301 N 301
Sbjct: 301 K 301
>gi|437189094|ref|ZP_20710580.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435233693|gb|ELO14668.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|257455619|ref|ZP_05620848.1| HTH-type transcriptional regulator cbl [Enhydrobacter aerosaccus
SK60]
gi|257446902|gb|EEV21916.1| HTH-type transcriptional regulator cbl [Enhydrobacter aerosaccus
SK60]
Length = 308
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 196/301 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR ++NLTE AL+TSQ GVSK I +LE+EL + +F+R GKR+ GLT
Sbjct: 1 MNFQQLRIIRETVRCDYNLTEVGNALFTSQSGVSKHIKDLEDELGVGLFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L +E ++ + +K + +++++ D G LTIA THTQ+RY LP +++ F FP
Sbjct: 61 EPGKELLVIVERMLHDASNIKTLAEQYTSQDKGELTIAATHTQSRYILPPVVQAFKQLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L LLQ P +I M+ + +ADI I TE LS +L++ Y W + I+VP +HPL
Sbjct: 121 KVHLRLLQAAPPEIAAMLLDGRADIGIATEALSSYSELVTFSYYHWYHAIVVPPNHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L +I++YP+ITY +GR +D F+ +L P IV+ ++SD+IKTYVE MGI
Sbjct: 181 LEQVTLADIAHYPIITYINGHTGRTMIDEAFAKAELQPDIVMTALDSDVIKTYVEFGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AF+ N+D L + LF + + ++QG +LR + Y F+ L +P L + +
Sbjct: 241 GIIADMAFNPNKDTQLTLLGCEPLFHQNTTLLAVRQGHFLRGFGYQFLALCNPTLTQATM 300
Query: 301 N 301
+
Sbjct: 301 H 301
>gi|261340030|ref|ZP_05967888.1| cys regulon transcriptional activator CysB [Enterobacter
cancerogenus ATCC 35316]
gi|296102100|ref|YP_003612246.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|345299524|ref|YP_004828882.1| LysR family transcriptional regulator [Enterobacter asburiae LF7a]
gi|392979407|ref|YP_006477995.1| transcriptional regulator CysB [Enterobacter cloacae subsp.
dissolvens SDM]
gi|401763955|ref|YP_006578962.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|288317950|gb|EFC56888.1| cys regulon transcriptional activator CysB [Enterobacter
cancerogenus ATCC 35316]
gi|295056559|gb|ADF61297.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|345093461|gb|AEN65097.1| transcriptional regulator, LysR family [Enterobacter asburiae LF7a]
gi|392325340|gb|AFM60293.1| transcriptional regulator CysB [Enterobacter cloacae subsp.
dissolvens SDM]
gi|400175489|gb|AFP70338.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|354723824|ref|ZP_09038039.1| transcriptional regulator CysB [Enterobacter mori LMG 25706]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|152969825|ref|YP_001334934.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238894332|ref|YP_002919066.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330002580|ref|ZP_08304365.1| cys regulon transcriptional activator CysB [Klebsiella sp. MS 92-3]
gi|365142154|ref|ZP_09347465.1| HTH-type transcriptional regulator CysB [Klebsiella sp. 4_1_44FAA]
gi|378978335|ref|YP_005226476.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402781160|ref|YP_006636706.1| cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|419975436|ref|ZP_14490846.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981328|ref|ZP_14496605.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419986572|ref|ZP_14501703.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992203|ref|ZP_14507161.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419998573|ref|ZP_14513359.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004415|ref|ZP_14519052.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010160|ref|ZP_14524636.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016339|ref|ZP_14530632.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021726|ref|ZP_14535903.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027202|ref|ZP_14541197.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033168|ref|ZP_14546976.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039522|ref|ZP_14553155.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044709|ref|ZP_14558186.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420050682|ref|ZP_14563979.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055969|ref|ZP_14569131.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420060851|ref|ZP_14573846.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420067559|ref|ZP_14580350.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073072|ref|ZP_14585703.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078838|ref|ZP_14591291.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420083706|ref|ZP_14595982.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421908182|ref|ZP_16338035.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421917863|ref|ZP_16347408.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424933860|ref|ZP_18352232.1| HTH-type transcriptional regulator CysB (Cys regulon
transcriptional activator) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425077098|ref|ZP_18480201.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425081101|ref|ZP_18484198.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|425087731|ref|ZP_18490824.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425091158|ref|ZP_18494243.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428151634|ref|ZP_18999345.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428933310|ref|ZP_19006866.1| transcriptional regulator CysB [Klebsiella pneumoniae JHCK1]
gi|428938231|ref|ZP_19011361.1| transcriptional regulator CysB [Klebsiella pneumoniae VA360]
gi|2851414|sp|P45600.2|CYSB_KLEPN RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|628813|pir||S43835 regulatory protein cysB - Klebsiella sp. (ATCC 15380)
gi|157829939|pdb|1AL3|A Chain A, Cofactor Binding Fragment Of Cysb From Klebsiella
Aerogenes
gi|150954674|gb|ABR76704.1| transcriptional regulator for cysteine regulon [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238546648|dbj|BAH62999.1| transcriptional regulator for cysteine regulon [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|328537259|gb|EGF63518.1| cys regulon transcriptional activator CysB [Klebsiella sp. MS 92-3]
gi|363652257|gb|EHL91299.1| HTH-type transcriptional regulator CysB [Klebsiella sp. 4_1_44FAA]
gi|364517746|gb|AEW60874.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397343079|gb|EJJ36230.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397343626|gb|EJJ36770.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397347793|gb|EJJ40898.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397360108|gb|EJJ52791.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397361445|gb|EJJ54107.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397365803|gb|EJJ58424.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397375161|gb|EJJ67464.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397379348|gb|EJJ71544.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397386507|gb|EJJ78585.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397393746|gb|EJJ85494.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397395716|gb|EJJ87417.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403081|gb|EJJ94670.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397410784|gb|EJK02057.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397411217|gb|EJK02477.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421187|gb|EJK12217.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427866|gb|EJK18622.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397432366|gb|EJK23028.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438388|gb|EJK28893.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444350|gb|EJK34629.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450937|gb|EJK41031.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402542054|gb|AFQ66203.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405592807|gb|EKB66259.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602531|gb|EKB75654.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|405604455|gb|EKB77576.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613315|gb|EKB86063.1| HTH-type transcriptional regulator CysB [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808047|gb|EKF79298.1| HTH-type transcriptional regulator CysB (Cys regulon
transcriptional activator) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410117882|emb|CCM80660.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119831|emb|CCM90033.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426305603|gb|EKV67722.1| transcriptional regulator CysB [Klebsiella pneumoniae JHCK1]
gi|426306017|gb|EKV68127.1| transcriptional regulator CysB [Klebsiella pneumoniae VA360]
gi|427538385|emb|CCM95483.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|146311847|ref|YP_001176921.1| transcriptional regulator CysB [Enterobacter sp. 638]
gi|145318723|gb|ABP60870.1| transcriptional regulator, LysR family [Enterobacter sp. 638]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|451970340|ref|ZP_21923567.1| HTH-type transcriptional regulator CysB [Vibrio alginolyticus
E0666]
gi|451933854|gb|EMD81521.1| HTH-type transcriptional regulator CysB [Vibrio alginolyticus
E0666]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++ +++ YPL+TY F+GR +LD F+ + LTP +V ++D+IKTYV + +G+
Sbjct: 181 KDKVTISDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L +
Sbjct: 241 GVIASMAVDEEQDSDLVAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTLPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|404401320|ref|ZP_10992904.1| transcriptional regulator CysB [Pseudomonas fuscovaginae UPB0736]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ DK+L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTVLDKDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|398864443|ref|ZP_10619978.1| transcriptional regulator [Pseudomonas sp. GM78]
gi|398245251|gb|EJN30777.1| transcriptional regulator [Pseudomonas sp. GM78]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|397165524|ref|ZP_10488973.1| HTH-type transcriptional regulator CysB [Enterobacter radicincitans
DSM 16656]
gi|396092806|gb|EJI90367.1| HTH-type transcriptional regulator CysB [Enterobacter radicincitans
DSM 16656]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+++ E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KQSVTIDELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDAHEIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|398878148|ref|ZP_10633277.1| transcriptional regulator [Pseudomonas sp. GM67]
gi|398885227|ref|ZP_10640145.1| transcriptional regulator [Pseudomonas sp. GM60]
gi|398192810|gb|EJM79940.1| transcriptional regulator [Pseudomonas sp. GM60]
gi|398200834|gb|EJM87732.1| transcriptional regulator [Pseudomonas sp. GM67]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|206577272|ref|YP_002238991.1| transcriptional regulator CysB [Klebsiella pneumoniae 342]
gi|288935902|ref|YP_003439961.1| LysR family transcriptional regulator [Klebsiella variicola At-22]
gi|290512954|ref|ZP_06552318.1| Cys regulon transcriptional activator CysB [Klebsiella sp. 1_1_55]
gi|206566330|gb|ACI08106.1| transcriptional regulator CysB [Klebsiella pneumoniae 342]
gi|288890611|gb|ADC58929.1| transcriptional regulator, LysR family [Klebsiella variicola At-22]
gi|289774567|gb|EFD82571.1| Cys regulon transcriptional activator CysB [Klebsiella sp. 1_1_55]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|109897945|ref|YP_661200.1| transcriptional regulator CysB [Pseudoalteromonas atlantica T6c]
gi|410628458|ref|ZP_11339177.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola mesophila KMM 241]
gi|109700226|gb|ABG40146.1| transcriptional regulator, LysR family [Pseudoalteromonas atlantica
T6c]
gi|410151934|dbj|GAC25946.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola mesophila KMM 241]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 DAGQDVINISREILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSIIVNRDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ Y L+TY F+GR +LD+ FS L P IV ++D+IKTYV L +GI
Sbjct: 181 TTSITIEDIAQYSLVTYVFGFTGRSELDQAFSRAGLEPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDEKLDSDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKSVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|401678293|ref|ZP_10810260.1| transcriptional regulator CysB [Enterobacter sp. SST3]
gi|400214504|gb|EJO45423.1| transcriptional regulator CysB [Enterobacter sp. SST3]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|168237763|ref|ZP_02662821.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194737763|ref|YP_002114744.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|204927894|ref|ZP_03219095.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|375001146|ref|ZP_09725486.1| cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|416424396|ref|ZP_11691652.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416428494|ref|ZP_11693945.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416440723|ref|ZP_11701150.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416445784|ref|ZP_11704612.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416450998|ref|ZP_11707891.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416456855|ref|ZP_11711740.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416468775|ref|ZP_11718124.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416479241|ref|ZP_11722106.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416485832|ref|ZP_11724875.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416499872|ref|ZP_11731015.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416509673|ref|ZP_11736804.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416511932|ref|ZP_11737516.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416525593|ref|ZP_11741714.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416538428|ref|ZP_11749403.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416544214|ref|ZP_11752734.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416551403|ref|ZP_11756479.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416559042|ref|ZP_11760488.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416569568|ref|ZP_11765645.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416579119|ref|ZP_11770977.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416585510|ref|ZP_11774876.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593462|ref|ZP_11779931.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416598505|ref|ZP_11782856.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416608419|ref|ZP_11789413.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614141|ref|ZP_11792474.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416619279|ref|ZP_11795000.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416629271|ref|ZP_11799987.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416637505|ref|ZP_11803481.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416651283|ref|ZP_11811048.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416656752|ref|ZP_11813304.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416666712|ref|ZP_11817745.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416680399|ref|ZP_11823309.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416695153|ref|ZP_11827561.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704273|ref|ZP_11830185.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416712789|ref|ZP_11836475.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719982|ref|ZP_11841787.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416724477|ref|ZP_11844897.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416730890|ref|ZP_11848869.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416739010|ref|ZP_11853634.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416750233|ref|ZP_11859640.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416757659|ref|ZP_11863261.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416761408|ref|ZP_11865469.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416769185|ref|ZP_11870957.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417474870|ref|ZP_12169831.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|418485408|ref|ZP_13054390.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418490107|ref|ZP_13056660.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418496095|ref|ZP_13062530.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499537|ref|ZP_13065944.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418502628|ref|ZP_13068997.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507407|ref|ZP_13073729.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418511194|ref|ZP_13077460.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418527544|ref|ZP_13093501.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|452120097|ref|YP_007470345.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|194713265|gb|ACF92486.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197289190|gb|EDY28557.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204323236|gb|EDZ08432.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322614972|gb|EFY11897.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621434|gb|EFY18288.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623224|gb|EFY20066.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628514|gb|EFY25302.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633678|gb|EFY30418.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638514|gb|EFY35209.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640816|gb|EFY37465.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645320|gb|EFY41848.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651797|gb|EFY48169.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654306|gb|EFY50628.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659272|gb|EFY55520.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662727|gb|EFY58934.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667662|gb|EFY63822.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671924|gb|EFY68045.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322677030|gb|EFY73094.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680308|gb|EFY76347.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685263|gb|EFY81259.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195427|gb|EFZ80606.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199322|gb|EFZ84416.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204780|gb|EFZ89776.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323212713|gb|EFZ97528.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217250|gb|EGA01971.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220718|gb|EGA05163.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225567|gb|EGA09795.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323232113|gb|EGA16220.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323234640|gb|EGA18727.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238092|gb|EGA22151.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243304|gb|EGA27323.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323248439|gb|EGA32374.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252545|gb|EGA36388.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255430|gb|EGA39196.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323260832|gb|EGA44434.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267581|gb|EGA51064.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270953|gb|EGA54389.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|353075834|gb|EHB41594.1| cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353645984|gb|EHC89532.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|363550660|gb|EHL34987.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363558626|gb|EHL42815.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363561953|gb|EHL46066.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363566653|gb|EHL50667.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363570336|gb|EHL54272.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363576249|gb|EHL60086.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363576645|gb|EHL60476.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366055298|gb|EHN19633.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366057342|gb|EHN21644.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366067196|gb|EHN31348.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366071029|gb|EHN35130.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366074352|gb|EHN38414.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366081354|gb|EHN45301.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366084869|gb|EHN48763.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366828165|gb|EHN55063.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205013|gb|EHP18540.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|451909101|gb|AGF80907.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAKYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|449047975|ref|ZP_21731053.1| transcriptional regulator CysB [Klebsiella pneumoniae hvKP1]
gi|448877161|gb|EMB12130.1| transcriptional regulator CysB [Klebsiella pneumoniae hvKP1]
Length = 324
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|387888930|ref|YP_006319228.1| HTH-type transcriptional regulator CysB [Escherichia blattae DSM
4481]
gi|414594741|ref|ZP_11444375.1| cys regulon transcriptional activator [Escherichia blattae NBRC
105725]
gi|386923763|gb|AFJ46717.1| HTH-type transcriptional regulator CysB [Escherichia blattae DSM
4481]
gi|403194243|dbj|GAB82027.1| cys regulon transcriptional activator [Escherichia blattae NBRC
105725]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ ++E++ YPL+TY F+GR +LD F+ L+P+IV ++D+IKTYV L +G+
Sbjct: 181 KSAVGIEELAQYPLVTYTFGFTGRSELDTAFNRAGLSPHIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEAHEIFTHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAVS 305
>gi|383189946|ref|YP_005200074.1| transcriptional regulator [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588204|gb|AEX51934.1| transcriptional regulator [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVQPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KEKVTIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDASDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|393761340|ref|ZP_10349977.1| transcriptional regulator CysB [Alishewanella agri BL06]
gi|392607350|gb|EIW90224.1| transcriptional regulator CysB [Alishewanella agri BL06]
Length = 325
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 199/303 (65%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK I LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVMNHNLNVSSTAESLYTSQPGISKQIRMLEDELGIQVFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + I+ ++E +K I KE + D G L IATTHTQARYALP +I+ F +FP
Sbjct: 61 PAGREVIEIAQQILAKVENIKAIAKEHTLPDQGKLNIATTHTQARYALPPVIRSFMQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P+QI+E AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 RVSLHMHQGSPQQISEAASRGDADFAIATEALHLYNDLVMLPCYHWNRSVIVRKDHPLAQ 180
Query: 181 L-NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L + + +++++ +P++TY F+GR +LDR F+ ++L P IV ++D+IKTYV L +G
Sbjct: 181 LSHKVQIEDVARFPIVTYVFGFTGRSELDRAFAARQLEPQIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D D++L ++ ASHLF + +++ ++G +LR+Y+Y FI+ +P L +
Sbjct: 241 VGVIASMAIDPVLDQDLVALDASHLFDASTTKIGFRKGAFLRTYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ K
Sbjct: 301 VEK 303
>gi|323495042|ref|ZP_08100131.1| transcriptional regulator CysB [Vibrio brasiliensis LMG 20546]
gi|323310699|gb|EGA63874.1| transcriptional regulator CysB [Vibrio brasiliensis LMG 20546]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEKVTIQDLASYPLVTYVFGFTGRSELDTAFNKYGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+FG + + + ++GT+LR+Y++ F++ +P L R +
Sbjct: 241 GVIASMAIDQEQDTDLVAIDASHIFGASTTSIGFRRGTFLRTYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|375109035|ref|ZP_09755289.1| transcriptional regulator CysB [Alishewanella jeotgali KCTC 22429]
gi|374571221|gb|EHR42350.1| transcriptional regulator CysB [Alishewanella jeotgali KCTC 22429]
Length = 325
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 197/303 (65%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK I LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVMNHNLNVSSTAESLYTSQPGISKQIRMLEDELGIQVFGRSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + I+ ++E +K I +E + D G L IATTHTQARYALP +I+ F +FP
Sbjct: 61 PAGKEVIDIAQQILAKVENIKAIAREHTLPDQGKLNIATTHTQARYALPPVIRTFMQKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P+QI+E AD AI TE L L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGSPQQISEAASRGDADFAIATEALHLYGDLVMLPCYHWNRSIIVRKDHPLTQ 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L + + +++++ +P++TY F+GR +LDR F+ +L P IV ++D+IKTYV L +G
Sbjct: 181 LTAKVQIEDVARFPIVTYVFGFTGRSELDRAFAAHQLEPQIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D D++L +I ASHLF + +++ ++G +LRSY+Y FI+ +P L +
Sbjct: 241 VGVIASMAIDPQLDQDLVAIDASHLFEASTTKIGFRKGAFLRSYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|322833311|ref|YP_004213338.1| LysR family transcriptional regulator [Rahnella sp. Y9602]
gi|384258449|ref|YP_005402383.1| transcriptional regulator CysB [Rahnella aquatilis HX2]
gi|321168512|gb|ADW74211.1| transcriptional regulator, LysR family [Rahnella sp. Y9602]
gi|380754425|gb|AFE58816.1| transcriptional regulator CysB [Rahnella aquatilis HX2]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVQPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KEKVTIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDASDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAIS 305
>gi|24374190|ref|NP_718233.1| transcriptional activator of cys regulon CysB [Shewanella
oneidensis MR-1]
gi|24348703|gb|AAN55677.1| transcriptional activator of cys regulon CysB [Shewanella
oneidensis MR-1]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II++F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPNIIRQFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W ++VP DHPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RTQISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D N DK+L +I A HLF + +++ ++G++LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAIDPNIDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTRDVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|332307065|ref|YP_004434916.1| LysR family transcriptional regulator [Glaciecola sp. 4H-3-7+YE-5]
gi|410645412|ref|ZP_11355875.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola agarilytica NO2]
gi|332174394|gb|AEE23648.1| transcriptional regulator, LysR family [Glaciecola sp. 4H-3-7+YE-5]
gi|410134923|dbj|GAC04274.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola agarilytica NO2]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 DAGQDVINISREILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSIIVNRDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ Y L+TY F+GR +LD+ FS L P IV ++D+IKTYV L +GI
Sbjct: 181 STSITIEDIAQYSLVTYVFGFTGRSELDQAFSRAGLDPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDEKLDSDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKSVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|429086824|ref|ZP_19149556.1| Regulatory protein CysB [Cronobacter universalis NCTC 9529]
gi|426506627|emb|CCK14668.1| Regulatory protein CysB [Cronobacter universalis NCTC 9529]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RESVNIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|237731711|ref|ZP_04562192.1| transcriptional regulator CysB [Citrobacter sp. 30_2]
gi|365107304|ref|ZP_09335638.1| HTH-type transcriptional regulator CysB [Citrobacter freundii
4_7_47CFAA]
gi|395229581|ref|ZP_10407892.1| transcriptional regulator CysB [Citrobacter sp. A1]
gi|421846971|ref|ZP_16280114.1| transcriptional regulator CysB [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424729687|ref|ZP_18158287.1| dna topoisomerase i [Citrobacter sp. L17]
gi|226907250|gb|EEH93168.1| transcriptional regulator CysB [Citrobacter sp. 30_2]
gi|363641413|gb|EHL80805.1| HTH-type transcriptional regulator CysB [Citrobacter freundii
4_7_47CFAA]
gi|394716796|gb|EJF22526.1| transcriptional regulator CysB [Citrobacter sp. A1]
gi|411771634|gb|EKS55306.1| transcriptional regulator CysB [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422895642|gb|EKU35429.1| dna topoisomerase i [Citrobacter sp. L17]
gi|455645710|gb|EMF24753.1| transcriptional regulator CysB [Citrobacter freundii GTC 09479]
Length = 324
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+S++E++ YPL+TY F+GR +LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 KSSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLEPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|410639370|ref|ZP_11349918.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola chathamensis S18K6]
gi|410140961|dbj|GAC08105.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola chathamensis S18K6]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 DAGQDVINISREILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSIIVNRDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ Y L+TY F+GR +LD+ FS L P IV ++D+IKTYV L +G+
Sbjct: 181 STSITIEDIAQYSLVTYVFGFTGRSELDQAFSRAGLDPKIVFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDEKLDSDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKSVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|50121212|ref|YP_050379.1| transcriptional regulator CysB [Pectobacterium atrosepticum
SCRI1043]
gi|49611738|emb|CAG75187.1| cys regulon transcriptional activator [Pectobacterium atrosepticum
SCRI1043]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVEAIKAVAGEHTYPDKGSLYVATTHTQARYALPSVIKGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQTETDLVTINANSIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|511012|emb|CAA55380.1| CYSB protein [Klebsiella aerogenes]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KASVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|366159159|ref|ZP_09459021.1| transcriptional regulator CysB [Escherichia sp. TW09308]
gi|432372436|ref|ZP_19615481.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE11]
gi|430896929|gb|ELC19156.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE11]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KNAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|119774461|ref|YP_927201.1| transcriptional regulator CysB [Shewanella amazonensis SB2B]
gi|119766961|gb|ABL99531.1| transcriptional regulator, LysR family [Shewanella amazonensis
SB2B]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 195/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP IIK F ++P
Sbjct: 61 PAGEQVIAIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPHIIKGFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ +AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPTQISELAARGEADFAIATEAMHLYSDLIMLPCYHWNRSIVVTRDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS++E++ YPL+TY F +++R F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSQISIEELARYPLVTYVFGFDRASEIERAFNRAGLEPRLVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A D N D++L +I ASHLF + +++ ++G++LRSY+Y FI+L +P L R +
Sbjct: 241 GVLASMAIDPNIDRDLVAIDASHLFAHSTTKIGFRKGSFLRSYMYDFIELFAPHLTRDVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|419762907|ref|ZP_14289153.1| cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|397744402|gb|EJK91614.1| cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 383
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 60 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 119
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F +P
Sbjct: 120 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIEGYP 179
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 180 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAT 239
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 240 KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 299
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 300 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 359
Query: 301 N 301
+
Sbjct: 360 D 360
>gi|113969928|ref|YP_733721.1| transcriptional regulator CysB [Shewanella sp. MR-4]
gi|114047164|ref|YP_737714.1| transcriptional regulator CysB [Shewanella sp. MR-7]
gi|117920178|ref|YP_869370.1| transcriptional regulator CysB [Shewanella sp. ANA-3]
gi|113884612|gb|ABI38664.1| transcriptional regulator, LysR family [Shewanella sp. MR-4]
gi|113888606|gb|ABI42657.1| transcriptional regulator, LysR family [Shewanella sp. MR-7]
gi|117612510|gb|ABK47964.1| transcriptional regulator, LysR family [Shewanella sp. ANA-3]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II++F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPHIIRQFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W ++VP DHPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RTHISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D N DK+L +I A HLF + +++ ++G++LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAIDPNIDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTRDVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|409422195|ref|ZP_11259301.1| transcriptional regulator CysB [Pseudomonas sp. HYS]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 198/304 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 EVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKIL 304
K +
Sbjct: 301 AKAI 304
>gi|170768190|ref|ZP_02902643.1| HTH-type transcriptional regulator CysB [Escherichia albertii
TW07627]
gi|170122956|gb|EDS91887.1| HTH-type transcriptional regulator CysB [Escherichia albertii
TW07627]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KNAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|156933746|ref|YP_001437662.1| transcriptional regulator CysB [Cronobacter sakazakii ATCC BAA-894]
gi|260598139|ref|YP_003210710.1| transcriptional regulator CysB [Cronobacter turicensis z3032]
gi|389840800|ref|YP_006342884.1| transcriptional regulator CysB [Cronobacter sakazakii ES15]
gi|417791934|ref|ZP_12439348.1| transcriptional regulator CysB [Cronobacter sakazakii E899]
gi|424799824|ref|ZP_18225366.1| Regulatory protein CysB [Cronobacter sakazakii 696]
gi|429085671|ref|ZP_19148636.1| Regulatory protein CysB [Cronobacter condimenti 1330]
gi|429093101|ref|ZP_19155707.1| Regulatory protein CysB [Cronobacter dublinensis 1210]
gi|429096597|ref|ZP_19158703.1| Regulatory protein CysB [Cronobacter dublinensis 582]
gi|429100773|ref|ZP_19162747.1| Regulatory protein CysB [Cronobacter turicensis 564]
gi|429104865|ref|ZP_19166734.1| Regulatory protein CysB [Cronobacter malonaticus 681]
gi|429110529|ref|ZP_19172299.1| Regulatory protein CysB [Cronobacter malonaticus 507]
gi|429115785|ref|ZP_19176703.1| Regulatory protein CysB [Cronobacter sakazakii 701]
gi|449308046|ref|YP_007440402.1| transcriptional regulator CysB [Cronobacter sakazakii SP291]
gi|156532000|gb|ABU76826.1| hypothetical protein ESA_01572 [Cronobacter sakazakii ATCC BAA-894]
gi|260217316|emb|CBA31294.1| HTH-type transcriptional regulator cysB [Cronobacter turicensis
z3032]
gi|333953983|gb|EGL71871.1| transcriptional regulator CysB [Cronobacter sakazakii E899]
gi|387851276|gb|AFJ99373.1| transcriptional regulator CysB [Cronobacter sakazakii ES15]
gi|423235545|emb|CCK07236.1| Regulatory protein CysB [Cronobacter sakazakii 696]
gi|426282937|emb|CCJ84816.1| Regulatory protein CysB [Cronobacter dublinensis 582]
gi|426287422|emb|CCJ88860.1| Regulatory protein CysB [Cronobacter turicensis 564]
gi|426291588|emb|CCJ92847.1| Regulatory protein CysB [Cronobacter malonaticus 681]
gi|426311686|emb|CCJ98412.1| Regulatory protein CysB [Cronobacter malonaticus 507]
gi|426318914|emb|CCK02816.1| Regulatory protein CysB [Cronobacter sakazakii 701]
gi|426545115|emb|CCJ74677.1| Regulatory protein CysB [Cronobacter condimenti 1330]
gi|426742149|emb|CCJ81820.1| Regulatory protein CysB [Cronobacter dublinensis 1210]
gi|449098079|gb|AGE86113.1| transcriptional regulator CysB [Cronobacter sakazakii SP291]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KESVNIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|262042999|ref|ZP_06016143.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259039716|gb|EEW40843.1| Cys regulon transcriptional activator CysB [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWSDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S+++++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVSIEDLAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|395499725|ref|ZP_10431304.1| transcriptional regulator CysB [Pseudomonas sp. PAMC 25886]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|398793852|ref|ZP_10554096.1| transcriptional regulator [Pantoea sp. YR343]
gi|398801280|ref|ZP_10560526.1| transcriptional regulator [Pantoea sp. GM01]
gi|398092408|gb|EJL82822.1| transcriptional regulator [Pantoea sp. GM01]
gi|398209923|gb|EJM96585.1| transcriptional regulator [Pantoea sp. YR343]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 194/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++E++++PL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSNVTIEELADFPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPIADPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|304396076|ref|ZP_07377958.1| transcriptional regulator, LysR family [Pantoea sp. aB]
gi|372273486|ref|ZP_09509522.1| transcriptional regulator CysB [Pantoea sp. SL1_M5]
gi|390434124|ref|ZP_10222662.1| transcriptional regulator CysB [Pantoea agglomerans IG1]
gi|440760240|ref|ZP_20939356.1| Cys regulon transcriptional activator CysB [Pantoea agglomerans
299R]
gi|304356445|gb|EFM20810.1| transcriptional regulator, LysR family [Pantoea sp. aB]
gi|436426250|gb|ELP23971.1| Cys regulon transcriptional activator CysB [Pantoea agglomerans
299R]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTADHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGQVTIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLIRIEAADIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|381404398|ref|ZP_09929082.1| transcriptional regulator CysB [Pantoea sp. Sc1]
gi|380737597|gb|EIB98660.1| transcriptional regulator CysB [Pantoea sp. Sc1]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTADHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGQVTIEELAEYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLIRIEAADIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|157145606|ref|YP_001452925.1| transcriptional regulator CysB [Citrobacter koseri ATCC BAA-895]
gi|157082811|gb|ABV12489.1| hypothetical protein CKO_01352 [Citrobacter koseri ATCC BAA-895]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPISDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|56413361|ref|YP_150436.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362285|ref|YP_002141922.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127618|gb|AAV77124.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093762|emb|CAR59236.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++S++++ ++ YPL+TY F GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 MSSVTIEALAQYPLVTYTFGFIGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|307130986|ref|YP_003883002.1| O-acetyl-L-serine-binding DNA-binding protein transcriptional dual
regulator [Dickeya dadantii 3937]
gi|306528515|gb|ADM98445.1| DNA-binding protein transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Dickeya dadantii
3937]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPDVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPMQIAEAVAKGSADFAIATEALHLYEDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D D +L +I+A +LF + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIANMAVDPASDPDLVAINADNLFSYSTTKIGFRRSTFLRSYMYDFIHRFAPHLTRDVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAIS 305
>gi|365970803|ref|YP_004952364.1| HTH-type transcriptional regulator CysB [Enterobacter cloacae
EcWSU1]
gi|365749716|gb|AEW73943.1| HTH-type transcriptional regulator CysB [Enterobacter cloacae
EcWSU1]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGAVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|238751912|ref|ZP_04613398.1| HTH-type transcriptional regulator cysB [Yersinia rohdei ATCC
43380]
gi|238709892|gb|EEQ02124.1| HTH-type transcriptional regulator cysB [Yersinia rohdei ATCC
43380]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|398896976|ref|ZP_10647886.1| transcriptional regulator [Pseudomonas sp. GM55]
gi|398177567|gb|EJM65243.1| transcriptional regulator [Pseudomonas sp. GM55]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDPKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|70731619|ref|YP_261360.1| transcriptional regulator CysB [Pseudomonas protegens Pf-5]
gi|68345918|gb|AAY93524.1| HTH-type transcriptional regulator CysB [Pseudomonas protegens
Pf-5]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 197/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLETLAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKIL 304
K +
Sbjct: 301 AKAI 304
>gi|410616319|ref|ZP_11327311.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola polaris LMG 21857]
gi|410164028|dbj|GAC31449.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola polaris LMG 21857]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 DAGQDVINISRQILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 RVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSIIVNRDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ Y L+TY F+GR +LD+ FS L P IV ++D+IKTYV L +GI
Sbjct: 181 STSITIEDIAQYSLVTYVFGFTGRSELDQAFSRAGLEPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDEKLDGDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKSVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|261821588|ref|YP_003259694.1| transcriptional regulator CysB [Pectobacterium wasabiae WPP163]
gi|261605601|gb|ACX88087.1| transcriptional regulator, LysR family [Pectobacterium wasabiae
WPP163]
gi|385871830|gb|AFI90350.1| HTH-type transcriptional regulator CysB [Pectobacterium sp.
SCC3193]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPSVIKGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQTETDLVTINANSIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|227326046|ref|ZP_03830070.1| transcriptional regulator CysB [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 324
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPSVIKGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQTETDLVTINANSIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|253688403|ref|YP_003017593.1| LysR family transcriptional regulator [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754981|gb|ACT13057.1| transcriptional regulator, LysR family [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 324
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPSVIKGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQTETDLVTINANSIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|423107981|ref|ZP_17095676.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5243]
gi|423113951|ref|ZP_17101642.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5245]
gi|376386714|gb|EHS99425.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5243]
gi|376387596|gb|EHT00306.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5245]
Length = 324
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W ++V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSVVVTPEHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RESVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|407365391|ref|ZP_11111923.1| transcriptional regulator CysB [Pseudomonas mandelii JR-1]
Length = 324
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 VSKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDAKLDSDLVMLDASDLFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|375260472|ref|YP_005019642.1| transcriptional regulator CysB [Klebsiella oxytoca KCTC 1686]
gi|397657552|ref|YP_006498254.1| cys regulon transcriptional activator CysB [Klebsiella oxytoca
E718]
gi|402842827|ref|ZP_10891230.1| cys regulon transcriptional activator CysB [Klebsiella sp. OBRC7]
gi|421729196|ref|ZP_16168346.1| transcriptional regulator CysB [Klebsiella oxytoca M5al]
gi|423102636|ref|ZP_17090338.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5242]
gi|423124193|ref|ZP_17111872.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5250]
gi|365909950|gb|AEX05403.1| transcriptional regulator CysB [Klebsiella oxytoca KCTC 1686]
gi|376388112|gb|EHT00813.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5242]
gi|376401280|gb|EHT13890.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5250]
gi|394345985|gb|AFN32106.1| Cys regulon transcriptional activator CysB [Klebsiella oxytoca
E718]
gi|402278213|gb|EJU27277.1| cys regulon transcriptional activator CysB [Klebsiella sp. OBRC7]
gi|410370291|gb|EKP25022.1| transcriptional regulator CysB [Klebsiella oxytoca M5al]
Length = 324
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W ++V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSVVVTPEHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RESVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|104781040|ref|YP_607538.1| transcriptional regulator CysB [Pseudomonas entomophila L48]
gi|95110027|emb|CAK14732.1| transcriptional regulator CysB [Pseudomonas entomophila L48]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L LI +PCY+W ++VP HPL
Sbjct: 121 EVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYKWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD F+ + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEAVAEYPIVTYVFGFTGRSKLDEAFNHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF +I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDPKLDSDLVCLDASELFEASITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|399912143|ref|ZP_10780457.1| transcriptional regulator CysB-like protein [Halomonas sp. KM-1]
Length = 310
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 197/305 (64%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +RE VR+ FNLTEA+ ALYTSQ G SK I +LEEEL +++F R GKRI GLT
Sbjct: 1 MNFQQLRIIRETVRRGFNLTEASNALYTSQSGASKHIRDLEEELGVELFERRGKRILGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G ++ IE I+ + E LK+ + + D G+L IATTHTQARYALP II F FP
Sbjct: 61 QGGATLVEIIERILLDAENLKRSAHQLTHEDQGSLAIATTHTQARYALPPIIARFKQIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISI-PCYQWEYVIIVPLDHPLL 179
KV L L Q P +I +++ + DI I TE L +L + P Y W + +IVP HPL
Sbjct: 121 KVHLELHQCGPDEIVSLLKAGKVDIGIATEALHEEGQLFACFPFYHWYHGVIVPEGHPLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
S++L+ I+ +P++TY F+GR ++DR FS ++ P IVL +++D+IKTYVEL +G
Sbjct: 181 NGESLTLERIAEHPIVTYHEGFTGRARIDRAFSAAEVMPDIVLTALDADVIKTYVELGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A+ RD+ L + AS+L + + +++G +LR+Y Y F++L L+
Sbjct: 241 VGLIASMAYHEERDRGLTLLDASNLLPRNTTYLALRRGHFLRAYAYRFLQLCREDLDEST 300
Query: 300 INKIL 304
+ ++L
Sbjct: 301 VQQVL 305
>gi|389681053|ref|ZP_10172398.1| HTH-type transcriptional regulator CysB [Pseudomonas chlororaphis
O6]
gi|399010170|ref|ZP_10712547.1| transcriptional regulator [Pseudomonas sp. GM17]
gi|425900717|ref|ZP_18877308.1| HTH-type transcriptional regulator CysB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|388554589|gb|EIM17837.1| HTH-type transcriptional regulator CysB [Pseudomonas chlororaphis
O6]
gi|397883253|gb|EJK99739.1| HTH-type transcriptional regulator CysB [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|398107724|gb|EJL97718.1| transcriptional regulator [Pseudomonas sp. GM17]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLETLAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|90415885|ref|ZP_01223818.1| transcriptional regulator CysB [gamma proteobacterium HTCC2207]
gi|90332259|gb|EAS47456.1| transcriptional regulator CysB [gamma proteobacterium HTCC2207]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 203/304 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ AK+LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAKSLYTSQPGISKQIRLLEDELGVEIFSRSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ IL+ I++++E +K++ ++ ++ + G+L+IATTHTQARYALP +I+ F ++P
Sbjct: 61 PTGEEILKIAGDILRQVESIKQLTQQHNSPNKGSLSIATTHTQARYALPSVIQGFIAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+E + D AI TE + + L+ +PCY+W I+VP +HPL
Sbjct: 121 EVSLHMHQGTPVQISEKAADGTVDFAIATEAMELYNDLLMMPCYRWNRCILVPKNHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++++++++ +P++TY F+GR +LD FS + L P +V ++D+IKTYV L +GI
Sbjct: 181 LANLTIEDVAKHPIVTYVFGFTGRSRLDDAFSKKNLEPKVVFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D +L +I A HLF ++++ + ++GTYLR Y+Y FI +P L R +
Sbjct: 241 GIVAHMAYDPELDTDLVAIEAGHLFESSVTSIGFRKGTYLRGYMYEFIHAFAPHLTRTVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DEAM 304
>gi|386034460|ref|YP_005954373.1| transcriptional regulator CysB [Klebsiella pneumoniae KCTC 2242]
gi|424830259|ref|ZP_18254987.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761588|gb|AEJ97808.1| transcriptional regulator CysB [Klebsiella pneumoniae KCTC 2242]
gi|414707684|emb|CCN29388.1| transcriptional regulator CysB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|317048297|ref|YP_004115945.1| LysR family transcriptional regulator [Pantoea sp. At-9b]
gi|316949914|gb|ADU69389.1| transcriptional regulator, LysR family [Pantoea sp. At-9b]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ +PL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAQVSIEELAEFPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|398965623|ref|ZP_10681096.1| transcriptional regulator [Pseudomonas sp. GM30]
gi|398991095|ref|ZP_10694250.1| transcriptional regulator [Pseudomonas sp. GM24]
gi|399011166|ref|ZP_10713499.1| transcriptional regulator [Pseudomonas sp. GM16]
gi|398118504|gb|EJM08235.1| transcriptional regulator [Pseudomonas sp. GM16]
gi|398141380|gb|EJM30303.1| transcriptional regulator [Pseudomonas sp. GM24]
gi|398146884|gb|EJM35609.1| transcriptional regulator [Pseudomonas sp. GM30]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|198245743|ref|YP_002215428.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|375118908|ref|ZP_09764075.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|445143357|ref|ZP_21386477.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445154289|ref|ZP_21391701.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|197940259|gb|ACH77592.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623175|gb|EGE29520.1| HTH-type transcriptional regulator CysB [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|444848265|gb|ELX73392.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444851137|gb|ELX76231.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLFKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|224583795|ref|YP_002637593.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468322|gb|ACN46152.1| transcriptional regulator for cysteine regulon [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ + YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALVQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|270262107|ref|ZP_06190379.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|333927500|ref|YP_004501079.1| LysR family transcriptional regulator [Serratia sp. AS12]
gi|333932454|ref|YP_004506032.1| LysR family transcriptional regulator [Serratia plymuthica AS9]
gi|386329323|ref|YP_006025493.1| LysR family transcriptional regulator [Serratia sp. AS13]
gi|386825280|ref|ZP_10112405.1| transcriptional regulator CysB [Serratia plymuthica PRI-2C]
gi|421783829|ref|ZP_16220274.1| positive transcriptional regulator for cysteine regulon [Serratia
plymuthica A30]
gi|270043983|gb|EFA17075.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|333474061|gb|AEF45771.1| transcriptional regulator, LysR family [Serratia plymuthica AS9]
gi|333491560|gb|AEF50722.1| transcriptional regulator, LysR family [Serratia sp. AS12]
gi|333961656|gb|AEG28429.1| transcriptional regulator, LysR family [Serratia sp. AS13]
gi|386377771|gb|EIJ18583.1| transcriptional regulator CysB [Serratia plymuthica PRI-2C]
gi|407754013|gb|EKF64151.1| positive transcriptional regulator for cysteine regulon [Serratia
plymuthica A30]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|398850971|ref|ZP_10607666.1| transcriptional regulator [Pseudomonas sp. GM80]
gi|398247819|gb|EJN33254.1| transcriptional regulator [Pseudomonas sp. GM80]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|261253444|ref|ZP_05946017.1| regulatory protein CysB [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417953201|ref|ZP_12596249.1| transcriptional regulator CysB [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260936835|gb|EEX92824.1| regulatory protein CysB [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342817733|gb|EGU52610.1| transcriptional regulator CysB [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 324
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++++PL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEKVTIQDLASFPLVTYVFGFTGRSELDTAFNKYGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L SI ASH+FG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDEELDTDLVSIDASHIFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|88812899|ref|ZP_01128143.1| transcriptional regulator CysB [Nitrococcus mobilis Nb-231]
gi|88789821|gb|EAR20944.1| transcriptional regulator CysB [Nitrococcus mobilis Nb-231]
Length = 326
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 193/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L+Q R++ E R+ N++ AA+ALYTSQPGVSK I LEEEL + IF R GK + +T
Sbjct: 1 MKLNQLRYICEVARRGLNVSAAAEALYTSQPGVSKQIRMLEEELGVQIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +L + I+ E++ +K I +E + G+L+IATTHTQAR+ LP ++ F ++P
Sbjct: 61 PAGEEVLAVAQRILGEVQNIKAIAQEHVSESRGSLSIATTHTQARHTLPLVVGAFRTRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM D AI TE L + L+ +PCY+W IIVP +H L
Sbjct: 121 NVSLHMHQGTPLQIAEMAARGSVDFAIATEALELFEDLVMMPCYRWNRSIIVPAEHSLCN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD+ F+ L P +V +S++IKTYVEL +G+
Sbjct: 181 EQPLTLETVARYPIVTYVFGFTGRSKLDKAFATAGLNPEVVFTATDSEVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA++AF+ RD L ++ ASHLF +I+ + ++G YLR Y++ FI+ +P L +
Sbjct: 241 GIIATMAFNPERDTGLTALDASHLFEPSITSIGFRRGMYLRGYMFDFIEAFAPHLTHSVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAI 304
>gi|395798655|ref|ZP_10477939.1| transcriptional regulator CysB [Pseudomonas sp. Ag1]
gi|421143460|ref|ZP_15603399.1| regulatory protein, LysR [Pseudomonas fluorescens BBc6R8]
gi|395337390|gb|EJF69247.1| transcriptional regulator CysB [Pseudomonas sp. Ag1]
gi|404505151|gb|EKA19182.1| regulatory protein, LysR [Pseudomonas fluorescens BBc6R8]
Length = 324
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|339999549|ref|YP_004730432.1| cys regulon transcriptional activator [Salmonella bongori NCTC
12419]
gi|339512910|emb|CCC30654.1| cys regulon transcriptional activator [Salmonella bongori NCTC
12419]
Length = 324
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KPSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|330808357|ref|YP_004352819.1| LysR family transcriptional regulator [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|378949623|ref|YP_005207111.1| protein CysB [Pseudomonas fluorescens F113]
gi|423696146|ref|ZP_17670636.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
Q8r1-96]
gi|327376465|gb|AEA67815.1| putative Transcription factor, LysR family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|359759637|gb|AEV61716.1| CysB [Pseudomonas fluorescens F113]
gi|388003667|gb|EIK64994.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
Q8r1-96]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|291617608|ref|YP_003520350.1| CysB [Pantoea ananatis LMG 20103]
gi|386079250|ref|YP_005992775.1| O-acetyl-L-serine binding protein CysB [Pantoea ananatis PA13]
gi|291152638|gb|ADD77222.1| CysB [Pantoea ananatis LMG 20103]
gi|354988431|gb|AER32555.1| O-acetyl-L-serine binding protein CysB [Pantoea ananatis PA13]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++++PL+TY F+GR +LD F LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAQVTIEELADFPLVTYTFGFTGRSELDTAFMRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|449328125|gb|AGE94426.1| transcriptional regulator CysB [Citrobacter amalonaticus Y19]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KASVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLSDPDLVRVDAHDVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|283832915|ref|ZP_06352656.1| HTH-type transcriptional regulator CysB [Citrobacter youngae ATCC
29220]
gi|291071520|gb|EFE09629.1| HTH-type transcriptional regulator CysB [Citrobacter youngae ATCC
29220]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 NTSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLEPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPISDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|423119912|ref|ZP_17107596.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5246]
gi|376397274|gb|EHT09908.1| HTH-type transcriptional regulator CysB [Klebsiella oxytoca
10-5246]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 RGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|317492185|ref|ZP_07950615.1| LysR substrate binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|365837349|ref|ZP_09378718.1| HTH-type transcriptional regulator CysB [Hafnia alvei ATCC 51873]
gi|316919890|gb|EFV41219.1| LysR substrate binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|364562081|gb|EHM39951.1| HTH-type transcriptional regulator CysB [Hafnia alvei ATCC 51873]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTSITIEELAEYPIVTYTFGFTGRSELDTAFNRAGLTPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D +D +L ++ S +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPVQDPDLVTVDTSDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|77460224|ref|YP_349731.1| transcriptional regulator CysB [Pseudomonas fluorescens Pf0-1]
gi|398977468|ref|ZP_10687139.1| transcriptional regulator [Pseudomonas sp. GM25]
gi|77384227|gb|ABA75740.1| cys regulon transcriptional activator, LysR family [Pseudomonas
fluorescens Pf0-1]
gi|398137901|gb|EJM26936.1| transcriptional regulator [Pseudomonas sp. GM25]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|334124321|ref|ZP_08498330.1| Cys regulon transcriptional activator CysB [Enterobacter hormaechei
ATCC 49162]
gi|295095686|emb|CBK84776.1| Transcriptional regulator [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|333389320|gb|EGK60486.1| Cys regulon transcriptional activator CysB [Enterobacter hormaechei
ATCC 49162]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGEVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|423096495|ref|ZP_17084291.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
Q2-87]
gi|397887865|gb|EJL04348.1| HTH-type transcriptional regulator CysB [Pseudomonas fluorescens
Q2-87]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDTKLDNDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|429122617|ref|ZP_19183187.1| Regulatory protein CysB [Cronobacter sakazakii 680]
gi|426322905|emb|CCK13924.1| Regulatory protein CysB [Cronobacter sakazakii 680]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYYWNRSIVVTPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KESVNIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|311279817|ref|YP_003942048.1| LysR family transcriptional regulator [Enterobacter cloacae SCF1]
gi|308749012|gb|ADO48764.1| transcriptional regulator, LysR family [Enterobacter cloacae SCF1]
Length = 324
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDAHEIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|420371689|ref|ZP_14872057.1| HTH-type transcriptional regulator CysB [Shigella flexneri 1235-66]
gi|391319020|gb|EIQ76100.1| HTH-type transcriptional regulator CysB [Shigella flexneri 1235-66]
Length = 324
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ YPL+TY F+GR +LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 KASVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLEPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPISDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|283785430|ref|YP_003365295.1| Cys regulon transcriptional activator [Citrobacter rodentium
ICC168]
gi|282948884|emb|CBG88486.1| Cys regulon transcriptional activator [Citrobacter rodentium
ICC168]
Length = 324
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++S++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSAVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLSDPDLVRVDAHDVFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|152988189|ref|YP_001348907.1| transcriptional regulator CysB [Pseudomonas aeruginosa PA7]
gi|150963347|gb|ABR85372.1| transcriptional regulator CysB [Pseudomonas aeruginosa PA7]
Length = 324
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIIHTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPNVISGFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYRWNRCVIVPHGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ P++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEQPIVTYVFGFTGRSKLDEAFSQRGLVPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L ++ ASHLF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAHMAVDPKLDNDLVTLDASHLFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRELL 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|329297655|ref|ZP_08254991.1| transcriptional regulator CysB [Plautia stali symbiont]
Length = 324
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVFNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ ++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PTGEEIIRIAREVLSRVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++S++E++++PL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSNVSIEELADFPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|440287821|ref|YP_007340586.1| transcriptional regulator [Enterobacteriaceae bacterium strain FGI
57]
gi|440047343|gb|AGB78401.1| transcriptional regulator [Enterobacteriaceae bacterium strain FGI
57]
Length = 324
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVKLDADGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|254468025|ref|ZP_05081431.1| transcriptional regulator, LysR family [beta proteobacterium KB13]
gi|207086835|gb|EDZ64118.1| transcriptional regulator, LysR family [beta proteobacterium KB13]
Length = 296
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 199/278 (71%), Gaps = 1/278 (0%)
Query: 16 NFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQ 75
NFN++ AA L+TSQPGVSK I LE+E+ + IF+R+GKR+ GLT+PGQ + +I I++
Sbjct: 4 NFNVSHAADNLHTSQPGVSKQIQLLEDEIKVKIFVRNGKRLVGLTEPGQYVYEAIGDILK 63
Query: 76 EIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQIT 135
+++ ++ I +++ + G TIATTHTQARY LPK+++ F Q+P +KL++ QGNP Q+T
Sbjct: 64 KVKNIRHISDNYASSEDGVFTIATTHTQARYKLPKVVEWFVKQYPNIKLNIHQGNPDQVT 123
Query: 136 EMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNS-ISLKEISNYPL 194
+ + ADI I TE + +DK+ +IPCYQW +++ P++HPL L+S I+L ++S +P+
Sbjct: 124 DQVEKGVADIGIATESIGLNDKIFTIPCYQWNRILVAPVNHPLNQLDSTITLNDLSQHPI 183
Query: 195 ITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDK 254
ITYD +F+G + + F L+P IVL I++D+IKTYV L +GIG++A +A+D N+D
Sbjct: 184 ITYDYAFTGSTSVSKAFKQAHLSPNIVLTAIDADVIKTYVNLNLGIGLVAEMAYDKNKDI 243
Query: 255 NLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLS 292
+L++I SHLF + + + +++ ++RS+V+ FI+ S
Sbjct: 244 DLKAIDLSHLFEPSTTLLGLRKDLFIRSFVFDFIQRFS 281
>gi|227111420|ref|ZP_03825076.1| transcriptional regulator CysB [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403058513|ref|YP_006646730.1| transcriptional regulator CysB [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|421079570|ref|ZP_15540508.1| HTH-type transcriptional regulator CysB [Pectobacterium wasabiae
CFBP 3304]
gi|401705656|gb|EJS95841.1| HTH-type transcriptional regulator CysB [Pectobacterium wasabiae
CFBP 3304]
gi|402805839|gb|AFR03477.1| transcriptional regulator CysB [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 324
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPSVIKGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQTETDLVTINANSIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|218549034|ref|YP_002382825.1| transcriptional regulator CysB [Escherichia fergusonii ATCC 35469]
gi|422805422|ref|ZP_16853854.1| LysR substrate binding domain-containing protein [Escherichia
fergusonii B253]
gi|424816431|ref|ZP_18241582.1| transcriptional regulator CysB [Escherichia fergusonii ECD227]
gi|218356575|emb|CAQ89198.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia fergusonii ATCC
35469]
gi|324113147|gb|EGC07122.1| LysR substrate binding domain-containing protein [Escherichia
fergusonii B253]
gi|325497451|gb|EGC95310.1| transcriptional regulator CysB [Escherichia fergusonii ECD227]
Length = 324
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYEDLVMLPCYHWNRSIVVTPEHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDDVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|146282386|ref|YP_001172539.1| transcriptional regulator CysB [Pseudomonas stutzeri A1501]
gi|339494003|ref|YP_004714296.1| transcriptional regulator CysB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386020669|ref|YP_005938693.1| transcriptional regulator CysB [Pseudomonas stutzeri DSM 4166]
gi|145570591|gb|ABP79697.1| transcriptional regulator CysB [Pseudomonas stutzeri A1501]
gi|327480641|gb|AEA83951.1| transcriptional regulator CysB [Pseudomonas stutzeri DSM 4166]
gi|338801375|gb|AEJ05207.1| transcriptional regulator CysB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 324
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPQVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVIVPRGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ +P++TY F+GR KLD F + L+P +V ++D+IKTYV L +G+
Sbjct: 181 LDKLTLEALAEHPIVTYVFGFTGRSKLDEAFGHRGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D N D +L + AS LF ++++++ ++GT+LR ++ FI+ +P LNR +
Sbjct: 241 GIVARMAVDPNLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIQQFAPHLNRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 EKAIQ 305
>gi|429330348|ref|ZP_19211140.1| transcriptional regulator CysB [Pseudomonas putida CSV86]
gi|428764878|gb|EKX87001.1| transcriptional regulator CysB [Pseudomonas putida CSV86]
Length = 324
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 EVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ YP++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEVLAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++I+++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAKMAVDPKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|87121385|ref|ZP_01077274.1| transcriptional regulator CysB [Marinomonas sp. MED121]
gi|86163228|gb|EAQ64504.1| transcriptional regulator CysB [Marinomonas sp. MED121]
Length = 324
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 192/305 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPGVSK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGVSKQIRLLEDELGVEVFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ + + +KK+ EFS G+L IATTHTQARYALP II +F +P
Sbjct: 61 PAGEKIIELAGEILNQTKNIKKVASEFSDDRKGSLDIATTHTQARYALPGIIHQFIEGYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L L+ +PCY W ++VP DHPL
Sbjct: 121 EVSLHMHQGTPMQIAEMANDGVVDFAIATEALELFGNLVMLPCYTWNRSVVVPKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL+ +S YP++TY F+GR +LD+ F +L P +V +SD+IKTYV L +G+
Sbjct: 181 EEKLSLQTLSEYPIVTYVFGFTGRSQLDQAFQSAELEPNVVFTAADSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A++A+D D++L ++ ASHLF + +R+ I+ ++R Y+Y FI+ +P L R+ +
Sbjct: 241 GIVATMAYDEKLDEDLVALDASHLFEDSCTRIGIRSNAFIRGYMYKFIQSFAPHLTRERV 300
Query: 301 NKILN 305
+
Sbjct: 301 EAAMQ 305
>gi|251789762|ref|YP_003004483.1| LysR family transcriptional regulator [Dickeya zeae Ech1591]
gi|247538383|gb|ACT07004.1| transcriptional regulator, LysR family [Dickeya zeae Ech1591]
Length = 324
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPDVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPMQIAEAVAKGSADFAIATEALHLYEDLIMLPCYHWNRAIVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTNISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A + D +L +I+A +LF + +++ ++ T+LRSY+Y FI +P L R I
Sbjct: 241 GVIANMAVTAASDPDLVAINADNLFSYSTTKIGFRRSTFLRSYMYDFIHRFAPHLTRDVI 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|378767083|ref|YP_005195548.1| LysR family transcriptional regulator [Pantoea ananatis LMG 5342]
gi|386015969|ref|YP_005934254.1| O-acetyl-L-serine binding protein CysB [Pantoea ananatis AJ13355]
gi|327394036|dbj|BAK11458.1| O-acetyl-L-serine binding protein CysB [Pantoea ananatis AJ13355]
gi|365186561|emb|CCF09511.1| LysR family transcriptional regulator [Pantoea ananatis LMG 5342]
Length = 324
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++++PL+TY F+GR +LD F LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAQVTIEELADFPLVTYTFGFTGRSELDTAFMRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|397687405|ref|YP_006524724.1| transcriptional regulator CysB [Pseudomonas stutzeri DSM 10701]
gi|395808961|gb|AFN78366.1| transcriptional regulator CysB [Pseudomonas stutzeri DSM 10701]
Length = 324
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKCESIKQIAQEFSNEKRGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVVVPQGHPLAR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +PL+TY F+GR KLD FS + L+P +V ++D+IKTYV L +G+
Sbjct: 181 LEKLTLEALAEHPLVTYVFGFTGRSKLDEAFSHRGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++R+ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDAKLDSDLVVLDASELFESSVTRIGFRRGTFLRGFMCDFIQTFAPHLDRDTL 300
Query: 301 NKILN 305
+K +
Sbjct: 301 DKAIQ 305
>gi|121997150|ref|YP_001001937.1| transcriptional regulator CysB [Halorhodospira halophila SL1]
gi|121588555|gb|ABM61135.1| transcriptional regulator, LysR family [Halorhodospira halophila
SL1]
Length = 333
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +F+ E V +N N++ AA ALYTSQ GVSK I LE+EL + IF+R GK + LT
Sbjct: 1 MKLRQLQFIHEVVHRNLNISAAADALYTSQSGVSKQIQALEDELGVQIFVRSGKSLSHLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + +++E ++ I +++ + G LTIATT TQA+YALP++I+ F ++P
Sbjct: 61 PAGERIIEATARLLEEARNIRAIAADYAGQERGQLTIATTQTQAKYALPRVIQRFRARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI E+ + D AI TE + + L+ +PCY+W ++VP DHPL
Sbjct: 121 NVSLHMHQGTPMQIAELAARGEVDFAIATEAMEHFEDLVMMPCYRWNRSVVVPADHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ +PL+TY F+GR +LD F L P +V ++++IKTYV+L +G+
Sbjct: 181 TEPLTLEALAAHPLVTYVFGFTGRSQLDAAFQGAGLDPEVVFTATDAEVIKTYVQLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFD + D+ L + ASHLF + + + ++G++LR ++Y+FI L +P L +
Sbjct: 241 GIIASMAFDPDTDEGLVARDASHLFAPSTTSIGFRRGSHLRGFMYAFIHLFAPHLTEAVV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|374314108|ref|YP_005060537.1| transcriptional regulator CysB [Serratia symbiotica str. 'Cinara
cedri']
gi|363988334|gb|AEW44525.1| transcriptional regulator CysB [Serratia symbiotica str. 'Cinara
cedri']
Length = 324
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 195/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +I+ +K + E++ D G+L IATTHTQA+YALP +IK F ++P
Sbjct: 61 PVGKEIIRIAREVLSKIDAIKAVAGEYTYPDKGHLYIATTHTQAQYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W II+ DHPL
Sbjct: 121 RVSLHIHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMMPCYHWNRAIIIKPDHPLAC 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N+I+++E++ +P++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 NNNITIEELATHPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDILQDSDLINIDARDIFAYSTTKIGFRRSTFLRSYMYQFIQRFAPHLTRDIV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|422762685|ref|ZP_16816441.1| LysR substrate binding domain-containing protein [Escherichia coli
E1167]
gi|422774863|ref|ZP_16828519.1| LysR substrate binding domain-containing protein [Escherichia coli
H120]
gi|323947444|gb|EGB43448.1| LysR substrate binding domain-containing protein [Escherichia coli
H120]
gi|324117533|gb|EGC11439.1| LysR substrate binding domain-containing protein [Escherichia coli
E1167]
Length = 324
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL+
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|399909547|ref|ZP_10778099.1| transcriptional regulator CysB [Halomonas sp. KM-1]
Length = 322
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 200/304 (65%), Gaps = 1/304 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+V E R N N++ A++LYTSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYVWEVTRHNLNVSATAQSLYTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G++I+ +++ + +K++ +E S G+L+IATTHTQARYALP +I EFT ++P
Sbjct: 61 PAGESIVELAGQVLRLTDNIKQVAQEHSDERRGSLSIATTHTQARYALPPVIGEFTRKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG PKQI +M+ + AD AI TE L L+ +PCY+W ++VP HP L
Sbjct: 121 DVALHMQQGTPKQIAQMVSDGMADFAICTESLELFADLVLLPCYRWNRCVLVPRGHP-LA 179
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ L+TY F+GR +LD F + LTP +VL ++D+IKTYV L +G+
Sbjct: 180 EGELTLERLAEQALVTYVFGFTGRSQLDDAFRARGLTPNVVLTAADADVIKTYVRLGLGV 239
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D D++L ++ A HLF ++++++ I++GT++R Y+Y F+K + L+R +
Sbjct: 240 GIVAHMAYDETLDEDLVALEAGHLFESSVTKIGIRRGTFMRGYMYDFVKGFAGHLDRDLV 299
Query: 301 NKIL 304
+ L
Sbjct: 300 DAAL 303
>gi|161503179|ref|YP_001570292.1| transcriptional regulator CysB [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160864526|gb|ABX21149.1| hypothetical protein SARI_01247 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 324
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSSVTIEELAQYPLVTYTFGFTGRSELDTAFNHAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLSDPDLVRVDTHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|242239354|ref|YP_002987535.1| LysR family transcriptional regulator [Dickeya dadantii Ech703]
gi|242131411|gb|ACS85713.1| transcriptional regulator, LysR family [Dickeya dadantii Ech703]
Length = 324
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPDVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGTADFAIATEALHLYEDLIMLPCYHWNRAIVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YPL+TY F+GR +LD F+ L+P IV ++D+IKTYV L +G+
Sbjct: 181 KAHVSIEELAAYPLVTYTFGFTGRSELDTAFNRTGLSPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D D +L +I+A +LF + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPISDPDLVTINADNLFSYSTTKIGFRRSTFLRSYMYDFIRRFAPHLTRDVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTAVS 305
>gi|444378783|ref|ZP_21177973.1| Cys regulon transcriptional activator CysB [Enterovibrio sp. AK16]
gi|443677125|gb|ELT83816.1| Cys regulon transcriptional activator CysB [Enterovibrio sp. AK16]
Length = 324
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V + N++ A++LYTSQPG+SK I LE+EL + IF R GK + LT
Sbjct: 1 MKLQQLKYIVEVVNHDLNVSSTAESLYTSQPGISKQIRSLEDELGVQIFGRSGKHLTKLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ I+ ++ +K + +E++ + G L IATTHTQARYALP +I F ++P
Sbjct: 61 PAGSQIVEIARDILSRVDSIKSVAQEYTNPERGQLNIATTHTQARYALPDVISRFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + +D AI TE + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGAPSQIADFVLKGASDFAIATEASHLYEDLLMLPCYHWTRSLIVRKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SIS+ +I+ YPL+TY F+GR LD F+ KL P IV ++D+IKTYV L +GI
Sbjct: 181 RSSISIYDIAQYPLVTYVFGFTGRSSLDTAFNKAKLKPNIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A +A+D+ D++L +I ASH+F + +R+ ++GT LRSY+Y FI+ +P L R+ I
Sbjct: 241 GVMARMAYDNELDRDLVAIDASHIFDASTTRIGFRRGTVLRSYMYDFIESFAPHLTRETI 300
Query: 301 NKILN 305
K++
Sbjct: 301 EKVMQ 305
>gi|333908014|ref|YP_004481600.1| LysR family transcriptional regulator [Marinomonas posidonica
IVIA-Po-181]
gi|333478020|gb|AEF54681.1| transcriptional regulator, LysR family [Marinomonas posidonica
IVIA-Po-181]
Length = 324
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 190/295 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E R + N++ A++LYTSQPGVSK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVARHDLNVSATAQSLYTSQPGVSKQIRLLEDELGVEVFARSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K++ EFS G+L IATTHTQARYALPK+I +F +P
Sbjct: 61 PAGEKIIALAGEVLNQTQNIKRVASEFSDERKGSLDIATTHTQARYALPKVINQFIEGYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L L+ +PCY W ++VP DHPL
Sbjct: 121 EVSLHMHQGTPMQIAEMANDGVVDFAIATEALELFGNLVMLPCYTWNRSVVVPKDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ ++ YP++TY F+GR +LD F +L P +V +SD+IKTYV L +G+
Sbjct: 181 MSVLTLEALAAYPIVTYVFGFTGRSQLDEAFQQAELEPNVVFTAADSDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+AS+A+D D +L ++ ASHLF + +++ I+ T++R Y+Y FI+ +P L
Sbjct: 241 GIVASMAYDETLDADLVALDASHLFADSCTKIGIRSNTFIRGYMYKFIESFAPHL 295
>gi|333900733|ref|YP_004474606.1| LysR family transcriptional regulator [Pseudomonas fulva 12-X]
gi|333115998|gb|AEF22512.1| transcriptional regulator, LysR family [Pseudomonas fulva 12-X]
Length = 324
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L + L+ +PCY+W +IVP HPL
Sbjct: 121 EVALHMHQGTPTQIAEMAADGTVDFAIATEGLELYNDLVMMPCYRWNRCVIVPQGHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ + ++TY F+GR KLD FS + LTP +V +++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEHEIVTYTFGFTGRSKLDEAFSHRGLTPKVVFTAVDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++R+ ++GT+LR ++ FI+ +P L R +
Sbjct: 241 GIVAGMAVDPKLDPDLVVLDASELFESSVTRIGFRRGTFLRGFMCDFIETFAPHLTRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|409397676|ref|ZP_11248539.1| transcriptional regulator CysB [Pseudomonas sp. Chol1]
gi|409117810|gb|EKM94236.1| transcriptional regulator CysB [Pseudomonas sp. Chol1]
Length = 324
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPRVISTFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGSPTQIAEMAADGTVDFAIATEGLELFGDLIMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS L+P +V ++D+IKTYV L +G+
Sbjct: 181 LEKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHHGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDARLDADLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEQFAPHLDRTML 300
Query: 301 NKILN 305
+K +
Sbjct: 301 DKAIQ 305
>gi|226944404|ref|YP_002799477.1| transcriptional regulator CysB [Azotobacter vinelandii DJ]
gi|226719331|gb|ACO78502.1| LysR family transcriptional regulator protein [Azotobacter
vinelandii DJ]
Length = 324
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISAFIRQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 EVSLHMHQGTPTQIAEMAADGTVDFAIATEGLELFSDLLMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ YP++TY F+GR KLD F + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LSKLTLEAVAEYPIVTYVFGFTGRSKLDEAFFNRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L ++ AS LF +++++ ++GT+LR ++ FI+ +P L R +
Sbjct: 241 GIVARMAVDEKLDGDLVALDASELFEPSVTKIAFRRGTFLRGFMCDFIERFAPHLTRPVL 300
Query: 301 NKILN 305
+K +
Sbjct: 301 SKAMQ 305
>gi|148981570|ref|ZP_01816457.1| transcriptional regulator for cysteine regulon [Vibrionales
bacterium SWAT-3]
gi|417951807|ref|ZP_12594892.1| transcriptional regulator CysB [Vibrio splendidus ATCC 33789]
gi|145960813|gb|EDK26147.1| transcriptional regulator for cysteine regulon [Vibrionales
bacterium SWAT-3]
gi|342803759|gb|EGU39108.1| transcriptional regulator CysB [Vibrio splendidus ATCC 33789]
Length = 324
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 QAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++++++ Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KQNITIEDLAAYSLVTYVFGFTGRSELDTAFNKVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDHEQDTDLVAIDASHLFGASTTSIGFRKGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|378579786|ref|ZP_09828448.1| O-acetyl-L-serine-binding DNA-binding transcriptional dual
regulator [Pantoea stewartii subsp. stewartii DC283]
gi|377817653|gb|EHU00747.1| O-acetyl-L-serine-binding DNA-binding transcriptional dual
regulator [Pantoea stewartii subsp. stewartii DC283]
Length = 324
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 CVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++++PL+TY F+GR +LD F LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGQVTIEELADFPLVTYTFGFTGRSELDTAFMRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I AS +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRIEASEIFTNSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|301647231|ref|ZP_07247050.1| cys regulon transcriptional activator CysB [Escherichia coli MS
146-1]
gi|301074593|gb|EFK89399.1| cys regulon transcriptional activator CysB [Escherichia coli MS
146-1]
Length = 324
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|432616178|ref|ZP_19852302.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE75]
gi|431156110|gb|ELE56851.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE75]
Length = 324
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|332141369|ref|YP_004427107.1| transcriptional regulator CysB [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551391|gb|AEA98109.1| transcriptional regulator CysB [Alteromonas macleodii str. 'Deep
ecotype']
Length = 324
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 193/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +K + +E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 DAGNDVINIAREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIQGFMSKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSVIVNKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I + +I+ YPL+TY F+GR +LD+ F +LTP IV ++D+IKTYV L +GI
Sbjct: 181 KGTIDISDIAKYPLVTYVFGFTGRSELDQAFERAELTPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVSEELDDDLVKIDASHLFDYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKDKV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|407071825|ref|ZP_11102663.1| transcriptional regulator CysB [Vibrio cyclitrophicus ZF14]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 QAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++++++ Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KRNITIEDLAAYSLVTYVFGFTGRSELDTAFNKVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDQEQDTDLVAIDASHLFGASTTSIGFRKGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|432898147|ref|ZP_20108978.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE192]
gi|433028248|ref|ZP_20216114.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE109]
gi|431428874|gb|ELH10815.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE192]
gi|431544445|gb|ELI19265.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE109]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIASEVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|170679623|ref|YP_001743910.1| transcriptional regulator CysB [Escherichia coli SMS-3-5]
gi|218699985|ref|YP_002407614.1| transcriptional regulator CysB [Escherichia coli IAI39]
gi|386623877|ref|YP_006143605.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Escherichia coli
O7:K1 str. CE10]
gi|419940554|ref|ZP_14457286.1| transcriptional regulator CysB [Escherichia coli 75]
gi|422830495|ref|ZP_16878652.1| HTH-type transcriptional regulator cysB [Escherichia coli B093]
gi|432736752|ref|ZP_19971520.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE42]
gi|170517341|gb|ACB15519.1| HTH-type transcriptional regulator CysB [Escherichia coli SMS-3-5]
gi|218369971|emb|CAR17745.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli IAI39]
gi|349737615|gb|AEQ12321.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Escherichia coli
O7:K1 str. CE10]
gi|371604834|gb|EHN93460.1| HTH-type transcriptional regulator cysB [Escherichia coli B093]
gi|388402902|gb|EIL63456.1| transcriptional regulator CysB [Escherichia coli 75]
gi|431284895|gb|ELF75743.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE42]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|333893041|ref|YP_004466916.1| transcriptional regulator CysB [Alteromonas sp. SN2]
gi|332993059|gb|AEF03114.1| transcriptional regulator CysB [Alteromonas sp. SN2]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +K + +E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 DAGNDVINISREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIQGFMSKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSVIVNKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI + +I+ YPL+TY F+GR +LD+ F LTP IV ++D+IKTYV L +GI
Sbjct: 181 KGSIDISDIAKYPLVTYVFGFTGRSELDQAFERAGLTPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVSDELDSDLVKIDASHLFDYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKDKV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|84394171|ref|ZP_00992902.1| cys regulon transcriptional activator [Vibrio splendidus 12B01]
gi|84375191|gb|EAP92107.1| cys regulon transcriptional activator [Vibrio splendidus 12B01]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 QAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS+++++ Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KRTISIEDLAAYSLVTYVFGFTGRSELDTAFNKVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDHEQDTDLVAIDASHLFGASTTSIGFRKGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|15801904|ref|NP_287924.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
EDL933]
gi|15831101|ref|NP_309874.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
Sakai]
gi|16129236|ref|NP_415791.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli str. K-12
substr. MG1655]
gi|26247606|ref|NP_753646.1| transcriptional regulator CysB [Escherichia coli CFT073]
gi|82544269|ref|YP_408216.1| transcriptional regulator CysB [Shigella boydii Sb227]
gi|91210567|ref|YP_540553.1| transcriptional regulator CysB [Escherichia coli UTI89]
gi|110641508|ref|YP_669238.1| transcriptional regulator CysB [Escherichia coli 536]
gi|117623535|ref|YP_852448.1| transcriptional regulator CysB [Escherichia coli APEC O1]
gi|157157588|ref|YP_001462572.1| transcriptional regulator CysB [Escherichia coli E24377A]
gi|157160780|ref|YP_001458098.1| transcriptional regulator CysB [Escherichia coli HS]
gi|168751167|ref|ZP_02776189.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4113]
gi|168763575|ref|ZP_02788582.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4501]
gi|168771275|ref|ZP_02796282.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4486]
gi|168775086|ref|ZP_02800093.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4196]
gi|168783780|ref|ZP_02808787.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4076]
gi|170020361|ref|YP_001725315.1| transcriptional regulator CysB [Escherichia coli ATCC 8739]
gi|170080952|ref|YP_001730272.1| transcriptional regulator CysB [Escherichia coli str. K-12 substr.
DH10B]
gi|187731082|ref|YP_001880106.1| transcriptional regulator CysB [Shigella boydii CDC 3083-94]
gi|188496048|ref|ZP_03003318.1| HTH-type transcriptional regulator CysB [Escherichia coli 53638]
gi|191166684|ref|ZP_03028512.1| HTH-type transcriptional regulator CysB [Escherichia coli B7A]
gi|191170907|ref|ZP_03032458.1| HTH-type transcriptional regulator CysB [Escherichia coli F11]
gi|193062611|ref|ZP_03043705.1| HTH-type transcriptional regulator CysB [Escherichia coli E22]
gi|193069955|ref|ZP_03050903.1| HTH-type transcriptional regulator CysB [Escherichia coli E110019]
gi|194425769|ref|ZP_03058325.1| HTH-type transcriptional regulator CysB [Escherichia coli B171]
gi|194435339|ref|ZP_03067546.1| HTH-type transcriptional regulator CysB [Shigella dysenteriae 1012]
gi|194437070|ref|ZP_03069169.1| HTH-type transcriptional regulator CysB [Escherichia coli 101-1]
gi|195939211|ref|ZP_03084593.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
EC4024]
gi|208811079|ref|ZP_03252912.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4206]
gi|208816350|ref|ZP_03257529.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4045]
gi|208819393|ref|ZP_03259713.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4042]
gi|209399190|ref|YP_002270329.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
EC4115]
gi|209918514|ref|YP_002292598.1| transcriptional regulator CysB [Escherichia coli SE11]
gi|215486570|ref|YP_002329001.1| transcriptional regulator CysB [Escherichia coli O127:H6 str.
E2348/69]
gi|217329223|ref|ZP_03445303.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. TW14588]
gi|218553828|ref|YP_002386741.1| transcriptional regulator CysB [Escherichia coli IAI1]
gi|218558263|ref|YP_002391176.1| transcriptional regulator CysB [Escherichia coli S88]
gi|218689266|ref|YP_002397478.1| transcriptional regulator CysB [Escherichia coli ED1a]
gi|218694847|ref|YP_002402514.1| transcriptional regulator CysB [Escherichia coli 55989]
gi|218704799|ref|YP_002412318.1| transcriptional regulator CysB [Escherichia coli UMN026]
gi|222156074|ref|YP_002556213.1| HTH-type transcriptional regulator cysB [Escherichia coli LF82]
gi|237705300|ref|ZP_04535781.1| transcriptional regulator CysB [Escherichia sp. 3_2_53FAA]
gi|238900508|ref|YP_002926304.1| transcriptional regulator CysB [Escherichia coli BW2952]
gi|251784780|ref|YP_002999084.1| CysB transcriptional dual regulator [Escherichia coli BL21(DE3)]
gi|253773728|ref|YP_003036559.1| transcriptional regulator CysB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161355|ref|YP_003044463.1| transcriptional regulator CysB [Escherichia coli B str. REL606]
gi|254288163|ref|YP_003053911.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli BL21(DE3)]
gi|254792863|ref|YP_003077700.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
TW14359]
gi|260843622|ref|YP_003221400.1| DNA-binding transcriptional dual regulator CysB,
O-acetyl-L-serine-binding [Escherichia coli O103:H2 str.
12009]
gi|260854972|ref|YP_003228863.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
11368]
gi|260867723|ref|YP_003234125.1| DNA-binding transcriptional dual regulator CysB [Escherichia coli
O111:H- str. 11128]
gi|261224257|ref|ZP_05938538.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257487|ref|ZP_05950020.1| DNA-binding transcriptional dual regulator CysB,
O-acetyl-L-serine-binding protein [Escherichia coli
O157:H7 str. FRIK966]
gi|291282362|ref|YP_003499180.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
CB9615]
gi|293404816|ref|ZP_06648808.1| Cys regulon transcriptional activator CysB [Escherichia coli
FVEC1412]
gi|293409664|ref|ZP_06653240.1| Cys regulon transcriptional activator CysB [Escherichia coli B354]
gi|293414607|ref|ZP_06657256.1| HTH-type transcriptional regulator cysB [Escherichia coli B185]
gi|293433634|ref|ZP_06662062.1| HTH-type transcriptional regulator cysB [Escherichia coli B088]
gi|297516909|ref|ZP_06935295.1| transcriptional regulator CysB [Escherichia coli OP50]
gi|300819015|ref|ZP_07099219.1| cys regulon transcriptional activator CysB [Escherichia coli MS
107-1]
gi|300822563|ref|ZP_07102702.1| cys regulon transcriptional activator CysB [Escherichia coli MS
119-7]
gi|300897329|ref|ZP_07115760.1| cys regulon transcriptional activator CysB [Escherichia coli MS
198-1]
gi|300904127|ref|ZP_07122000.1| cys regulon transcriptional activator CysB [Escherichia coli MS
84-1]
gi|300919456|ref|ZP_07135957.1| cys regulon transcriptional activator CysB [Escherichia coli MS
115-1]
gi|300926658|ref|ZP_07142434.1| cys regulon transcriptional activator CysB [Escherichia coli MS
182-1]
gi|300927781|ref|ZP_07143345.1| cys regulon transcriptional activator CysB [Escherichia coli MS
187-1]
gi|300951913|ref|ZP_07165717.1| cys regulon transcriptional activator CysB [Escherichia coli MS
116-1]
gi|300955858|ref|ZP_07168197.1| cys regulon transcriptional activator CysB [Escherichia coli MS
175-1]
gi|300971717|ref|ZP_07171590.1| cys regulon transcriptional activator CysB [Escherichia coli MS
45-1]
gi|300971801|ref|ZP_07171635.1| cys regulon transcriptional activator CysB [Escherichia coli MS
200-1]
gi|301017644|ref|ZP_07182318.1| cys regulon transcriptional activator CysB [Escherichia coli MS
69-1]
gi|301022788|ref|ZP_07186630.1| cys regulon transcriptional activator CysB [Escherichia coli MS
196-1]
gi|301046116|ref|ZP_07193291.1| cys regulon transcriptional activator CysB [Escherichia coli MS
185-1]
gi|301304774|ref|ZP_07210880.1| cys regulon transcriptional activator CysB [Escherichia coli MS
124-1]
gi|301326999|ref|ZP_07220288.1| cys regulon transcriptional activator CysB [Escherichia coli MS
78-1]
gi|306813702|ref|ZP_07447883.1| transcriptional regulator CysB [Escherichia coli NC101]
gi|307309972|ref|ZP_07589622.1| transcriptional regulator, LysR family [Escherichia coli W]
gi|309793253|ref|ZP_07687680.1| cys regulon transcriptional activator CysB [Escherichia coli MS
145-7]
gi|312966796|ref|ZP_07781014.1| HTH-type transcriptional regulator cysB [Escherichia coli 2362-75]
gi|312971465|ref|ZP_07785640.1| HTH-type transcriptional regulator cysB [Escherichia coli 1827-70]
gi|331641833|ref|ZP_08342968.1| HTH-type transcriptional regulator CysB [Escherichia coli H736]
gi|331646598|ref|ZP_08347701.1| HTH-type transcriptional regulator CysB [Escherichia coli M605]
gi|331652315|ref|ZP_08353334.1| HTH-type transcriptional regulator CysB [Escherichia coli M718]
gi|331657322|ref|ZP_08358284.1| HTH-type transcriptional regulator CysB [Escherichia coli TA206]
gi|331662687|ref|ZP_08363610.1| HTH-type transcriptional regulator CysB [Escherichia coli TA143]
gi|331667660|ref|ZP_08368524.1| HTH-type transcriptional regulator CysB [Escherichia coli TA271]
gi|331672801|ref|ZP_08373587.1| HTH-type transcriptional regulator CysB [Escherichia coli TA280]
gi|331677053|ref|ZP_08377749.1| HTH-type transcriptional regulator CysB [Escherichia coli H591]
gi|331682762|ref|ZP_08383381.1| HTH-type transcriptional regulator CysB [Escherichia coli H299]
gi|332279533|ref|ZP_08391946.1| transcriptional regulator CysB [Shigella sp. D9]
gi|378713351|ref|YP_005278244.1| LysR family transcriptional regulator [Escherichia coli KO11FL]
gi|383178740|ref|YP_005456745.1| transcriptional regulator CysB [Shigella sonnei 53G]
gi|386280392|ref|ZP_10058058.1| HTH-type transcriptional regulator CysB [Escherichia sp. 4_1_40B]
gi|386595906|ref|YP_006092306.1| LysR family transcriptional regulator [Escherichia coli DH1]
gi|386599175|ref|YP_006100681.1| HTH-type transcriptional regulator CysB [Escherichia coli IHE3034]
gi|386604667|ref|YP_006110967.1| transcriptional regulator CysB [Escherichia coli UM146]
gi|386608609|ref|YP_006124095.1| O-acetyl-L-serine-binding DNA-binding protein transcriptional dual
regulator [Escherichia coli W]
gi|386613698|ref|YP_006133364.1| HTH-type transcriptional regulator protein CysB [Escherichia coli
UMNK88]
gi|386618983|ref|YP_006138563.1| Transcriptional regulator CysB [Escherichia coli NA114]
gi|386629052|ref|YP_006148772.1| transcriptional regulator CysB [Escherichia coli str. 'clone D i2']
gi|386633972|ref|YP_006153691.1| transcriptional regulator CysB [Escherichia coli str. 'clone D
i14']
gi|386638842|ref|YP_006105640.1| HTH-type transcriptional regulator CysB [Escherichia coli ABU
83972]
gi|386701775|ref|YP_006165612.1| transcriptional regulator CysB [Escherichia coli KO11FL]
gi|386704988|ref|YP_006168835.1| HTH-type transcriptional regulator cysB [Escherichia coli P12b]
gi|386709061|ref|YP_006172782.1| transcriptional regulator CysB [Escherichia coli W]
gi|387506465|ref|YP_006158721.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
RM12579]
gi|387606856|ref|YP_006095712.1| cys regulon transcriptiona activator [Escherichia coli 042]
gi|387611837|ref|YP_006114953.1| cys regulon transcriptiona activator [Escherichia coli ETEC H10407]
gi|387616648|ref|YP_006119670.1| transcriptional regulator CysB [Escherichia coli O83:H1 str. NRG
857C]
gi|387620988|ref|YP_006128615.1| transcriptional regulator CysB [Escherichia coli DH1]
gi|387829308|ref|YP_003349245.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli SE15]
gi|387882332|ref|YP_006312634.1| transcriptional regulator CysB [Escherichia coli Xuzhou21]
gi|388477355|ref|YP_489543.1| DNA-binding transcriptional dual regulator [Escherichia coli str.
K-12 substr. W3110]
gi|404374637|ref|ZP_10979845.1| HTH-type transcriptional regulator CysB [Escherichia sp. 1_1_43]
gi|407469004|ref|YP_006784554.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482333|ref|YP_006779482.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2011C-3493]
gi|410482885|ref|YP_006770431.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414576290|ref|ZP_11433478.1| HTH-type transcriptional regulator CysB [Shigella sonnei 3233-85]
gi|415772289|ref|ZP_11485687.1| HTH-type transcriptional regulator cysB [Escherichia coli 3431]
gi|415790586|ref|ZP_11495144.1| HTH-type transcriptional regulator cysB [Escherichia coli EPECa14]
gi|415796717|ref|ZP_11497748.1| HTH-type transcriptional regulator cysB [Escherichia coli E128010]
gi|415819351|ref|ZP_11508794.1| HTH-type transcriptional regulator cysB [Escherichia coli OK1180]
gi|415827089|ref|ZP_11514006.1| HTH-type transcriptional regulator cysB [Escherichia coli OK1357]
gi|415841465|ref|ZP_11522536.1| HTH-type transcriptional regulator cysB [Escherichia coli RN587/1]
gi|415845089|ref|ZP_11524732.1| HTH-type transcriptional regulator cysB [Shigella sonnei 53G]
gi|415868628|ref|ZP_11539881.1| cys regulon transcriptional activator CysB [Escherichia coli MS
85-1]
gi|415876159|ref|ZP_11542695.1| HTH-type transcriptional regulator CysB [Escherichia coli MS 79-10]
gi|416280785|ref|ZP_11645555.1| Cys regulon transcriptional activator CysB [Shigella boydii ATCC
9905]
gi|416311349|ref|ZP_11657037.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. 1044]
gi|416320755|ref|ZP_11663154.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. EC1212]
gi|416329159|ref|ZP_11668662.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. 1125]
gi|416336094|ref|ZP_11672742.1| Cys regulon transcriptional activator CysB [Escherichia coli
WV_060327]
gi|416344558|ref|ZP_11678413.1| Cys regulon transcriptional activator CysB [Escherichia coli
EC4100B]
gi|416782738|ref|ZP_11877945.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
G5101]
gi|416794024|ref|ZP_11882861.1| transcriptional regulator CysB [Escherichia coli O157:H- str.
493-89]
gi|416805672|ref|ZP_11887716.1| transcriptional regulator CysB [Escherichia coli O157:H- str. H
2687]
gi|416816532|ref|ZP_11892431.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
3256-97]
gi|416826035|ref|ZP_11897028.1| transcriptional regulator CysB [Escherichia coli O55:H7 str. USDA
5905]
gi|416837198|ref|ZP_11902286.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
LSU-61]
gi|416896759|ref|ZP_11926606.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_7v]
gi|417084150|ref|ZP_11951934.1| transcriptional regulator CysB [Escherichia coli cloneA_i1]
gi|417113056|ref|ZP_11964976.1| HTH-type transcriptional regulator CysB [Escherichia coli 1.2741]
gi|417126288|ref|ZP_11974013.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0246]
gi|417132036|ref|ZP_11976821.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.0588]
gi|417137646|ref|ZP_11981436.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0259]
gi|417154690|ref|ZP_11992819.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0497]
gi|417159288|ref|ZP_11996438.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0741]
gi|417172866|ref|ZP_12002899.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.2608]
gi|417181379|ref|ZP_12008514.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0624]
gi|417199633|ref|ZP_12017036.1| HTH-type transcriptional regulator CysB [Escherichia coli 4.0522]
gi|417204646|ref|ZP_12018828.1| HTH-type transcriptional regulator CysB [Escherichia coli JB1-95]
gi|417222396|ref|ZP_12025836.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.154]
gi|417233564|ref|ZP_12034328.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.0959]
gi|417240234|ref|ZP_12036670.1| HTH-type transcriptional regulator CysB [Escherichia coli 9.0111]
gi|417254003|ref|ZP_12045759.1| HTH-type transcriptional regulator CysB [Escherichia coli 4.0967]
gi|417262883|ref|ZP_12050345.1| HTH-type transcriptional regulator CysB [Escherichia coli 2.3916]
gi|417266190|ref|ZP_12053558.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.3884]
gi|417274532|ref|ZP_12061872.1| HTH-type transcriptional regulator CysB [Escherichia coli 2.4168]
gi|417278747|ref|ZP_12066062.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.2303]
gi|417283164|ref|ZP_12070461.1| HTH-type transcriptional regulator CysB [Escherichia coli 3003]
gi|417288414|ref|ZP_12075699.1| HTH-type transcriptional regulator CysB [Escherichia coli TW07793]
gi|417289628|ref|ZP_12076911.1| HTH-type transcriptional regulator CysB [Escherichia coli B41]
gi|417297538|ref|ZP_12084782.1| HTH-type transcriptional regulator CysB [Escherichia coli 900105
(10e)]
gi|417307775|ref|ZP_12094635.1| HTH-type transcriptional regulator CysB [Escherichia coli PCN033]
gi|417580842|ref|ZP_12231649.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_B2F1]
gi|417586208|ref|ZP_12236981.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_C165-02]
gi|417591266|ref|ZP_12241971.1| HTH-type transcriptional regulator cysB [Escherichia coli 2534-86]
gi|417596370|ref|ZP_12247023.1| HTH-type transcriptional regulator cysB [Escherichia coli 3030-1]
gi|417602085|ref|ZP_12252658.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_94C]
gi|417607905|ref|ZP_12258414.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_DG131-3]
gi|417612646|ref|ZP_12263110.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_EH250]
gi|417617808|ref|ZP_12268234.1| HTH-type transcriptional regulator cysB [Escherichia coli G58-1]
gi|417623187|ref|ZP_12273495.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_H.1.8]
gi|417628594|ref|ZP_12278835.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_MHI813]
gi|417634243|ref|ZP_12284458.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_S1191]
gi|417638633|ref|ZP_12288792.1| HTH-type transcriptional regulator cysB [Escherichia coli TX1999]
gi|417661923|ref|ZP_12311504.1| cys regulon transcriptional activator CysB [Escherichia coli AA86]
gi|417666535|ref|ZP_12316090.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_O31]
gi|417670481|ref|ZP_12319983.1| HTH-type transcriptional regulator cysB [Shigella dysenteriae
155-74]
gi|417689203|ref|ZP_12338438.1| HTH-type transcriptional regulator cysB [Shigella boydii 5216-82]
gi|417755305|ref|ZP_12403394.1| cysB [Escherichia coli DEC2B]
gi|417832528|ref|ZP_12478994.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
01-09591]
gi|417868021|ref|ZP_12513053.1| hypothetical protein C22711_4945 [Escherichia coli O104:H4 str.
C227-11]
gi|417944391|ref|ZP_12587634.1| transcriptional regulator CysB [Escherichia coli XH140A]
gi|417976129|ref|ZP_12616924.1| transcriptional regulator CysB [Escherichia coli XH001]
gi|418265928|ref|ZP_12885637.1| cysB [Shigella sonnei str. Moseley]
gi|418302507|ref|ZP_12914301.1| HTH-type transcriptional regulator cysB [Escherichia coli UMNF18]
gi|418941280|ref|ZP_13494613.1| transcriptional regulator CysB [Escherichia coli O157:H43 str. T22]
gi|418996457|ref|ZP_13544060.1| cysB [Escherichia coli DEC1A]
gi|419001696|ref|ZP_13549239.1| cysB [Escherichia coli DEC1B]
gi|419007184|ref|ZP_13554630.1| cysB [Escherichia coli DEC1C]
gi|419013102|ref|ZP_13560461.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC1D]
gi|419017920|ref|ZP_13565237.1| cysB [Escherichia coli DEC1E]
gi|419023578|ref|ZP_13570814.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC2A]
gi|419034104|ref|ZP_13581198.1| cysB [Escherichia coli DEC2D]
gi|419039221|ref|ZP_13586268.1| cysB [Escherichia coli DEC2E]
gi|419045192|ref|ZP_13592141.1| cysB [Escherichia coli DEC3A]
gi|419050992|ref|ZP_13597877.1| cysB [Escherichia coli DEC3B]
gi|419062394|ref|ZP_13609140.1| cysB [Escherichia coli DEC3D]
gi|419069281|ref|ZP_13614964.1| cysB [Escherichia coli DEC3E]
gi|419080346|ref|ZP_13625812.1| cysB [Escherichia coli DEC4A]
gi|419086137|ref|ZP_13631514.1| cysB [Escherichia coli DEC4B]
gi|419092116|ref|ZP_13637413.1| cysB [Escherichia coli DEC4C]
gi|419098082|ref|ZP_13643299.1| cysB [Escherichia coli DEC4D]
gi|419103789|ref|ZP_13648936.1| cysB [Escherichia coli DEC4E]
gi|419109326|ref|ZP_13654399.1| cysB [Escherichia coli DEC4F]
gi|419114309|ref|ZP_13659338.1| cysB [Escherichia coli DEC5A]
gi|419119999|ref|ZP_13664970.1| cysB [Escherichia coli DEC5B]
gi|419125773|ref|ZP_13670664.1| cysB [Escherichia coli DEC5C]
gi|419131166|ref|ZP_13676012.1| cysB [Escherichia coli DEC5D]
gi|419136059|ref|ZP_13680861.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC5E]
gi|419141926|ref|ZP_13686673.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6A]
gi|419147923|ref|ZP_13692605.1| cysB [Escherichia coli DEC6B]
gi|419153254|ref|ZP_13697834.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6C]
gi|419158703|ref|ZP_13703216.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6D]
gi|419163792|ref|ZP_13708254.1| cysB [Escherichia coli DEC6E]
gi|419169312|ref|ZP_13713705.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC7A]
gi|419174868|ref|ZP_13718717.1| cysB [Escherichia coli DEC7B]
gi|419180337|ref|ZP_13723958.1| cysB [Escherichia coli DEC7C]
gi|419185852|ref|ZP_13729373.1| cysB [Escherichia coli DEC7D]
gi|419191123|ref|ZP_13734589.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC7E]
gi|419196530|ref|ZP_13739928.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC8A]
gi|419202768|ref|ZP_13745974.1| cysB [Escherichia coli DEC8B]
gi|419208968|ref|ZP_13752070.1| cysB [Escherichia coli DEC8C]
gi|419215186|ref|ZP_13758201.1| cysB [Escherichia coli DEC8D]
gi|419220868|ref|ZP_13763809.1| cysB [Escherichia coli DEC8E]
gi|419226265|ref|ZP_13769136.1| cysB [Escherichia coli DEC9A]
gi|419231925|ref|ZP_13774710.1| cysB [Escherichia coli DEC9B]
gi|419237334|ref|ZP_13780066.1| cysB [Escherichia coli DEC9C]
gi|419242846|ref|ZP_13785491.1| cysB [Escherichia coli DEC9D]
gi|419248597|ref|ZP_13791193.1| cysB [Escherichia coli DEC9E]
gi|419254420|ref|ZP_13796948.1| cysB [Escherichia coli DEC10A]
gi|419260627|ref|ZP_13803059.1| cysB [Escherichia coli DEC10B]
gi|419266657|ref|ZP_13809024.1| cysB [Escherichia coli DEC10C]
gi|419272054|ref|ZP_13814363.1| cysB [Escherichia coli DEC10D]
gi|419277548|ref|ZP_13819809.1| cysB [Escherichia coli DEC10E]
gi|419283580|ref|ZP_13825774.1| cysB [Escherichia coli DEC10F]
gi|419289111|ref|ZP_13831210.1| cysB [Escherichia coli DEC11A]
gi|419294375|ref|ZP_13836423.1| cysB [Escherichia coli DEC11B]
gi|419299782|ref|ZP_13841788.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11C]
gi|419305913|ref|ZP_13847821.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11D]
gi|419311000|ref|ZP_13852870.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11E]
gi|419316256|ref|ZP_13858076.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC12A]
gi|419322265|ref|ZP_13863988.1| cysB [Escherichia coli DEC12B]
gi|419328341|ref|ZP_13869967.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC12C]
gi|419334007|ref|ZP_13875551.1| cysB [Escherichia coli DEC12D]
gi|419339210|ref|ZP_13880693.1| cysB [Escherichia coli DEC12E]
gi|419344963|ref|ZP_13886345.1| cysB [Escherichia coli DEC13A]
gi|419349396|ref|ZP_13890748.1| cysB [Escherichia coli DEC13B]
gi|419354568|ref|ZP_13895840.1| cysB [Escherichia coli DEC13C]
gi|419359791|ref|ZP_13901015.1| cysB [Escherichia coli DEC13D]
gi|419364861|ref|ZP_13906032.1| cysB [Escherichia coli DEC13E]
gi|419369587|ref|ZP_13910713.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC14A]
gi|419375130|ref|ZP_13916166.1| cysB [Escherichia coli DEC14B]
gi|419380339|ref|ZP_13921304.1| cysB [Escherichia coli DEC14C]
gi|419385676|ref|ZP_13926562.1| cysB [Escherichia coli DEC14D]
gi|419391096|ref|ZP_13931918.1| cysB [Escherichia coli DEC15A]
gi|419396132|ref|ZP_13936911.1| cysB [Escherichia coli DEC15B]
gi|419401513|ref|ZP_13942240.1| cysB [Escherichia coli DEC15C]
gi|419406700|ref|ZP_13947392.1| cysB [Escherichia coli DEC15D]
gi|419412201|ref|ZP_13952864.1| cysB [Escherichia coli DEC15E]
gi|419700169|ref|ZP_14227778.1| transcriptional regulator CysB [Escherichia coli SCI-07]
gi|419803861|ref|ZP_14329027.1| transcriptional regulator CysB [Escherichia coli AI27]
gi|419811377|ref|ZP_14336252.1| transcriptional regulator CysB [Escherichia coli O32:H37 str. P4]
gi|419866499|ref|ZP_14388859.1| transcriptional regulator CysB [Escherichia coli O103:H25 str.
CVM9340]
gi|419871941|ref|ZP_14393989.1| transcriptional regulator CysB [Escherichia coli O103:H2 str.
CVM9450]
gi|419876739|ref|ZP_14398431.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9534]
gi|419879511|ref|ZP_14400943.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9545]
gi|419891080|ref|ZP_14411232.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9570]
gi|419897769|ref|ZP_14417347.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9574]
gi|419900705|ref|ZP_14420130.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM9942]
gi|419908780|ref|ZP_14427448.1| hypothetical protein ECO10026_27812 [Escherichia coli O26:H11 str.
CVM10026]
gi|419914953|ref|ZP_14433332.1| transcriptional regulator CysB [Escherichia coli KD1]
gi|419918408|ref|ZP_14436609.1| transcriptional regulator CysB [Escherichia coli KD2]
gi|419924791|ref|ZP_14442662.1| transcriptional regulator CysB [Escherichia coli 541-15]
gi|419928274|ref|ZP_14445990.1| transcriptional regulator CysB [Escherichia coli 541-1]
gi|419936645|ref|ZP_14453636.1| transcriptional regulator CysB [Escherichia coli 576-1]
gi|419945903|ref|ZP_14462330.1| transcriptional regulator CysB [Escherichia coli HM605]
gi|419951682|ref|ZP_14467867.1| transcriptional regulator CysB [Escherichia coli CUMT8]
gi|420087724|ref|ZP_14599672.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9602]
gi|420098409|ref|ZP_14609679.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9634]
gi|420104914|ref|ZP_14615517.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9455]
gi|420106661|ref|ZP_14617057.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9553]
gi|420114312|ref|ZP_14623988.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10021]
gi|420118704|ref|ZP_14628024.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10030]
gi|420125431|ref|ZP_14634244.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10224]
gi|420132787|ref|ZP_14641101.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM9952]
gi|420269091|ref|ZP_14771474.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA22]
gi|420280067|ref|ZP_14782322.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW06591]
gi|420286184|ref|ZP_14788387.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW10246]
gi|420291966|ref|ZP_14794105.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW11039]
gi|420297659|ref|ZP_14799728.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09109]
gi|420303691|ref|ZP_14805703.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW10119]
gi|420309287|ref|ZP_14811238.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1738]
gi|420314623|ref|ZP_14816512.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1734]
gi|420358843|ref|ZP_14859822.1| HTH-type transcriptional regulator CysB [Shigella sonnei 3226-85]
gi|420385184|ref|ZP_14884551.1| HTH-type transcriptional regulator CysB [Escherichia coli EPECa12]
gi|420390863|ref|ZP_14890127.1| cysB [Escherichia coli EPEC C342-62]
gi|421682016|ref|ZP_16121835.1| cysB [Shigella flexneri 1485-80]
gi|421776744|ref|ZP_16213346.1| transcriptional regulator CysB [Escherichia coli AD30]
gi|421811873|ref|ZP_16247634.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 8.0416]
gi|421817934|ref|ZP_16253463.1| HTH-type transcriptional regulator CysB [Escherichia coli 10.0821]
gi|421823596|ref|ZP_16259001.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK920]
gi|421830377|ref|ZP_16265684.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA7]
gi|422353058|ref|ZP_16433824.1| cys regulon transcriptional activator CysB [Escherichia coli MS
117-3]
gi|422357033|ref|ZP_16437704.1| cys regulon transcriptional activator CysB [Escherichia coli MS
110-3]
gi|422361928|ref|ZP_16442517.1| cys regulon transcriptional activator CysB [Escherichia coli MS
153-1]
gi|422370994|ref|ZP_16451379.1| cys regulon transcriptional activator CysB [Escherichia coli MS
16-3]
gi|422377412|ref|ZP_16457653.1| cys regulon transcriptional activator CysB [Escherichia coli MS
60-1]
gi|422382685|ref|ZP_16462840.1| cys regulon transcriptional activator CysB [Escherichia coli MS
57-2]
gi|422752305|ref|ZP_16806208.1| LysR substrate binding domain-containing protein [Escherichia coli
H252]
gi|422757744|ref|ZP_16811560.1| LysR substrate binding domain-containing protein [Escherichia coli
H263]
gi|422765823|ref|ZP_16819550.1| LysR substrate binding domain-containing protein [Escherichia coli
E1520]
gi|422770489|ref|ZP_16824180.1| LysR substrate binding domain-containing protein [Escherichia coli
E482]
gi|422781853|ref|ZP_16834638.1| LysR substrate binding domain-containing protein [Escherichia coli
TW10509]
gi|422785884|ref|ZP_16838623.1| LysR substrate binding domain-containing protein [Escherichia coli
H489]
gi|422790050|ref|ZP_16842755.1| LysR substrate binding domain-containing protein [Escherichia coli
TA007]
gi|422802853|ref|ZP_16851345.1| LysR substrate binding domain-containing protein [Escherichia coli
M863]
gi|422817407|ref|ZP_16865621.1| HTH-type transcriptional regulator CysB [Escherichia coli M919]
gi|422834896|ref|ZP_16882955.1| hypothetical protein ESOG_02556 [Escherichia coli E101]
gi|422838700|ref|ZP_16886673.1| HTH-type transcriptional regulator cysB [Escherichia coli H397]
gi|422958564|ref|ZP_16970495.1| HTH-type transcriptional regulator CysB [Escherichia coli H494]
gi|422975871|ref|ZP_16976865.1| HTH-type transcriptional regulator CysB [Escherichia coli TA124]
gi|422987260|ref|ZP_16978036.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. C227-11]
gi|422994141|ref|ZP_16984905.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. C236-11]
gi|422999332|ref|ZP_16990088.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 09-7901]
gi|423002933|ref|ZP_16993679.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 04-8351]
gi|423009454|ref|ZP_17000192.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-3677]
gi|423023647|ref|ZP_17014350.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4404]
gi|423028796|ref|ZP_17019489.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4522]
gi|423029663|ref|ZP_17020351.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4623]
gi|423037502|ref|ZP_17028176.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042616|ref|ZP_17033283.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423049308|ref|ZP_17039965.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052889|ref|ZP_17041697.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059855|ref|ZP_17048651.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423700250|ref|ZP_17674738.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA31]
gi|423705228|ref|ZP_17679651.1| HTH-type transcriptional regulator CysB [Escherichia coli H730]
gi|423709321|ref|ZP_17683699.1| HTH-type transcriptional regulator CysB [Escherichia coli B799]
gi|424076945|ref|ZP_17814083.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA505]
gi|424083294|ref|ZP_17819938.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA517]
gi|424089814|ref|ZP_17825895.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1996]
gi|424096211|ref|ZP_17831720.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1985]
gi|424102598|ref|ZP_17837531.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1990]
gi|424109369|ref|ZP_17843748.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 93-001]
gi|424115086|ref|ZP_17849069.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA3]
gi|424121382|ref|ZP_17854878.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA5]
gi|424127567|ref|ZP_17860596.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA9]
gi|424133691|ref|ZP_17866302.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA10]
gi|424140329|ref|ZP_17872389.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA14]
gi|424146776|ref|ZP_17878309.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA15]
gi|424152781|ref|ZP_17883843.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA24]
gi|424226593|ref|ZP_17889336.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA25]
gi|424302831|ref|ZP_17895191.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA28]
gi|424442675|ref|ZP_17900962.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA32]
gi|424455278|ref|ZP_17906593.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA33]
gi|424461616|ref|ZP_17912281.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA39]
gi|424468054|ref|ZP_17918032.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA41]
gi|424474602|ref|ZP_17924074.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA42]
gi|424480444|ref|ZP_17929526.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW07945]
gi|424486574|ref|ZP_17935255.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09098]
gi|424492887|ref|ZP_17940918.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09195]
gi|424499826|ref|ZP_17946889.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4203]
gi|424506003|ref|ZP_17952564.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4196]
gi|424512336|ref|ZP_17958324.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW14313]
gi|424519767|ref|ZP_17964022.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW14301]
gi|424525689|ref|ZP_17969526.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4421]
gi|424531863|ref|ZP_17975317.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4422]
gi|424537861|ref|ZP_17980927.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4013]
gi|424543791|ref|ZP_17986383.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4402]
gi|424550077|ref|ZP_17992079.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4439]
gi|424556319|ref|ZP_17997849.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4436]
gi|424562667|ref|ZP_18003776.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4437]
gi|424568731|ref|ZP_18009445.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4448]
gi|424574869|ref|ZP_18015100.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1845]
gi|424580778|ref|ZP_18020545.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1863]
gi|424751703|ref|ZP_18179730.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424765327|ref|ZP_18192727.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424770644|ref|ZP_18197839.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425097500|ref|ZP_18500359.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.4870]
gi|425103722|ref|ZP_18506146.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.2239]
gi|425109542|ref|ZP_18511597.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 6.0172]
gi|425125335|ref|ZP_18526673.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.0586]
gi|425131282|ref|ZP_18532221.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.2524]
gi|425137639|ref|ZP_18538165.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 10.0833]
gi|425143547|ref|ZP_18543672.1| HTH-type transcriptional regulator CysB [Escherichia coli 10.0869]
gi|425149650|ref|ZP_18549374.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.0221]
gi|425155471|ref|ZP_18554849.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA34]
gi|425161921|ref|ZP_18560932.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA506]
gi|425167567|ref|ZP_18566189.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA507]
gi|425173698|ref|ZP_18571938.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA504]
gi|425179650|ref|ZP_18577507.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1999]
gi|425185931|ref|ZP_18583346.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1997]
gi|425199109|ref|ZP_18595504.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE037]
gi|425205620|ref|ZP_18601562.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK2001]
gi|425211308|ref|ZP_18606859.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA4]
gi|425217414|ref|ZP_18612540.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA23]
gi|425223971|ref|ZP_18618617.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA49]
gi|425230173|ref|ZP_18624379.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA45]
gi|425236331|ref|ZP_18630155.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TT12B]
gi|425242454|ref|ZP_18635892.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli MA6]
gi|425248484|ref|ZP_18641525.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 5905]
gi|425254388|ref|ZP_18647040.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli CB7326]
gi|425260616|ref|ZP_18652787.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC96038]
gi|425266714|ref|ZP_18658459.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 5412]
gi|425272366|ref|ZP_18663816.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW15901]
gi|425277400|ref|ZP_18668701.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli ARS4.2123]
gi|425282859|ref|ZP_18673933.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW00353]
gi|425288131|ref|ZP_18679013.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 3006]
gi|425294187|ref|ZP_18684538.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA38]
gi|425300072|ref|ZP_18690045.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 07798]
gi|425304868|ref|ZP_18694621.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli N1]
gi|425310868|ref|ZP_18700158.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1735]
gi|425316790|ref|ZP_18705689.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1736]
gi|425322900|ref|ZP_18711378.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1737]
gi|425329071|ref|ZP_18717094.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1846]
gi|425335242|ref|ZP_18722778.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1847]
gi|425341650|ref|ZP_18728686.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1848]
gi|425347494|ref|ZP_18734117.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1849]
gi|425353749|ref|ZP_18739950.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1850]
gi|425359724|ref|ZP_18745513.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1856]
gi|425365858|ref|ZP_18751205.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1862]
gi|425372278|ref|ZP_18757060.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1864]
gi|425378871|ref|ZP_18763040.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1865]
gi|425385113|ref|ZP_18768807.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1866]
gi|425391811|ref|ZP_18775072.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1868]
gi|425397930|ref|ZP_18780777.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1869]
gi|425403937|ref|ZP_18786341.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1870]
gi|425410488|ref|ZP_18792412.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE098]
gi|425422008|ref|ZP_18803199.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 0.1288]
gi|425428011|ref|ZP_18808804.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 0.1304]
gi|427804415|ref|ZP_18971482.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli chi7122]
gi|427808997|ref|ZP_18976062.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|428946458|ref|ZP_19018905.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.1467]
gi|428952665|ref|ZP_19024593.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.1042]
gi|428958499|ref|ZP_19029977.1| HTH-type transcriptional regulator CysB [Escherichia coli 89.0511]
gi|428965015|ref|ZP_19035956.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.0091]
gi|428970998|ref|ZP_19041470.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.0039]
gi|428977396|ref|ZP_19047366.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.2281]
gi|428983174|ref|ZP_19052708.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0055]
gi|428989512|ref|ZP_19058598.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0056]
gi|428995225|ref|ZP_19063963.1| HTH-type transcriptional regulator CysB [Escherichia coli 94.0618]
gi|429001404|ref|ZP_19069714.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0183]
gi|429007575|ref|ZP_19075258.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.1288]
gi|429014036|ref|ZP_19081076.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0943]
gi|429020045|ref|ZP_19086666.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0428]
gi|429025921|ref|ZP_19092101.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0427]
gi|429032091|ref|ZP_19097754.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0939]
gi|429038213|ref|ZP_19103468.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0932]
gi|429044236|ref|ZP_19109060.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0107]
gi|429049756|ref|ZP_19114376.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0003]
gi|429055034|ref|ZP_19119457.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.1742]
gi|429060732|ref|ZP_19124816.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0007]
gi|429066685|ref|ZP_19130298.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0672]
gi|429072803|ref|ZP_19136108.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 99.0678]
gi|429078139|ref|ZP_19141314.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0713]
gi|429718712|ref|ZP_19253656.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9450]
gi|429724050|ref|ZP_19258921.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9990]
gi|429775670|ref|ZP_19307661.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02030]
gi|429777758|ref|ZP_19309727.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782002|ref|ZP_19313929.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02092]
gi|429788505|ref|ZP_19320385.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02093]
gi|429793935|ref|ZP_19325776.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02281]
gi|429797588|ref|ZP_19329392.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02318]
gi|429806008|ref|ZP_19337747.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02913]
gi|429810453|ref|ZP_19342154.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-03439]
gi|429814558|ref|ZP_19346227.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-04080]
gi|429819921|ref|ZP_19351546.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-03943]
gi|429825833|ref|ZP_19357062.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0109]
gi|429832125|ref|ZP_19362696.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0010]
gi|429912253|ref|ZP_19378209.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9941]
gi|429913137|ref|ZP_19379087.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4984]
gi|429918181|ref|ZP_19384116.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923975|ref|ZP_19389891.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932869|ref|ZP_19398763.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4987]
gi|429934473|ref|ZP_19400363.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4988]
gi|429940135|ref|ZP_19406009.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947771|ref|ZP_19413626.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-6006]
gi|429950409|ref|ZP_19416257.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec12-0465]
gi|429953708|ref|ZP_19419544.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec12-0466]
gi|432353208|ref|ZP_19596484.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE2]
gi|432357715|ref|ZP_19600946.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE4]
gi|432362339|ref|ZP_19605512.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE5]
gi|432369343|ref|ZP_19612439.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE10]
gi|432376465|ref|ZP_19619464.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE12]
gi|432381040|ref|ZP_19623988.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE15]
gi|432386796|ref|ZP_19629689.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE16]
gi|432391537|ref|ZP_19634384.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE21]
gi|432397181|ref|ZP_19639964.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE25]
gi|432401558|ref|ZP_19644311.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE26]
gi|432406139|ref|ZP_19648857.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE28]
gi|432411530|ref|ZP_19654202.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE39]
gi|432416374|ref|ZP_19658990.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE44]
gi|432421548|ref|ZP_19664098.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE178]
gi|432425626|ref|ZP_19668134.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE181]
gi|432431471|ref|ZP_19673907.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE187]
gi|432436467|ref|ZP_19678858.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE188]
gi|432440796|ref|ZP_19683139.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE189]
gi|432445896|ref|ZP_19688199.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE191]
gi|432453821|ref|ZP_19696050.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE193]
gi|432456303|ref|ZP_19698497.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE201]
gi|432460400|ref|ZP_19702552.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE204]
gi|432465363|ref|ZP_19707456.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE205]
gi|432470662|ref|ZP_19712712.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE206]
gi|432480677|ref|ZP_19722636.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE210]
gi|432484975|ref|ZP_19726893.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE212]
gi|432488960|ref|ZP_19730842.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE213]
gi|432495278|ref|ZP_19737086.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE214]
gi|432499752|ref|ZP_19741515.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE216]
gi|432504047|ref|ZP_19745780.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE220]
gi|432513599|ref|ZP_19750828.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE224]
gi|432517359|ref|ZP_19754554.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE228]
gi|432523468|ref|ZP_19760602.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE230]
gi|432530654|ref|ZP_19767689.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE233]
gi|432533495|ref|ZP_19770482.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE234]
gi|432537457|ref|ZP_19774363.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE235]
gi|432542710|ref|ZP_19779561.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE236]
gi|432548184|ref|ZP_19784968.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE237]
gi|432553356|ref|ZP_19790085.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE47]
gi|432558478|ref|ZP_19795158.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE49]
gi|432563492|ref|ZP_19800093.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE51]
gi|432568312|ref|ZP_19804832.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE53]
gi|432573399|ref|ZP_19809884.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE55]
gi|432579951|ref|ZP_19816380.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE56]
gi|432583461|ref|ZP_19819864.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE57]
gi|432587641|ref|ZP_19823998.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE58]
gi|432592456|ref|ZP_19828782.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE60]
gi|432597365|ref|ZP_19833642.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE62]
gi|432601784|ref|ZP_19838031.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE66]
gi|432607188|ref|ZP_19843379.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE67]
gi|432611082|ref|ZP_19847247.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE72]
gi|432621459|ref|ZP_19857497.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE76]
gi|432626848|ref|ZP_19862829.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE77]
gi|432631031|ref|ZP_19866961.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE80]
gi|432636518|ref|ZP_19872398.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE81]
gi|432640577|ref|ZP_19876414.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE83]
gi|432645845|ref|ZP_19881639.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE86]
gi|432650754|ref|ZP_19886513.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE87]
gi|432655445|ref|ZP_19891154.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE93]
gi|432660533|ref|ZP_19896181.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE111]
gi|432665663|ref|ZP_19901246.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE116]
gi|432670264|ref|ZP_19905801.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE119]
gi|432674273|ref|ZP_19909757.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE142]
gi|432685082|ref|ZP_19920389.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE156]
gi|432691226|ref|ZP_19926460.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE161]
gi|432694145|ref|ZP_19929354.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE162]
gi|432698722|ref|ZP_19933883.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE169]
gi|432703928|ref|ZP_19939043.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE171]
gi|432710307|ref|ZP_19945371.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE6]
gi|432713092|ref|ZP_19948135.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE8]
gi|432718299|ref|ZP_19953274.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE9]
gi|432722805|ref|ZP_19957727.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE17]
gi|432727392|ref|ZP_19962273.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE18]
gi|432732076|ref|ZP_19966911.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE45]
gi|432741079|ref|ZP_19975800.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE23]
gi|432745332|ref|ZP_19980026.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE43]
gi|432749723|ref|ZP_19984334.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE29]
gi|432754121|ref|ZP_19988674.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE22]
gi|432759155|ref|ZP_19993654.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE46]
gi|432764618|ref|ZP_19999062.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE48]
gi|432770182|ref|ZP_20004530.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE50]
gi|432774434|ref|ZP_20008718.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE54]
gi|432778253|ref|ZP_20012498.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE59]
gi|432783252|ref|ZP_20017435.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE63]
gi|432787197|ref|ZP_20021332.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE65]
gi|432792527|ref|ZP_20026614.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE78]
gi|432798487|ref|ZP_20032511.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE79]
gi|432801558|ref|ZP_20035540.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE84]
gi|432805370|ref|ZP_20039310.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE91]
gi|432808889|ref|ZP_20042794.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE101]
gi|432814897|ref|ZP_20048686.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE115]
gi|432820622|ref|ZP_20054325.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE118]
gi|432826778|ref|ZP_20060432.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE123]
gi|432831242|ref|ZP_20064822.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE135]
gi|432834320|ref|ZP_20067861.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE136]
gi|432838976|ref|ZP_20072464.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE140]
gi|432843987|ref|ZP_20077041.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE141]
gi|432849789|ref|ZP_20080932.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE144]
gi|432861079|ref|ZP_20086163.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE146]
gi|432874805|ref|ZP_20093669.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE147]
gi|432881200|ref|ZP_20097572.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE154]
gi|432886130|ref|ZP_20100325.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE158]
gi|432894074|ref|ZP_20106035.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE165]
gi|432904228|ref|ZP_20113450.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE194]
gi|432912212|ref|ZP_20118145.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE190]
gi|432918608|ref|ZP_20122949.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE173]
gi|432926383|ref|ZP_20128164.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE175]
gi|432933858|ref|ZP_20133475.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE184]
gi|432937407|ref|ZP_20135910.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE183]
gi|432946695|ref|ZP_20142244.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE196]
gi|432954637|ref|ZP_20146661.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE197]
gi|432961136|ref|ZP_20151021.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE202]
gi|432967391|ref|ZP_20156307.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE203]
gi|432971517|ref|ZP_20160390.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE207]
gi|432977977|ref|ZP_20166800.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE209]
gi|432980799|ref|ZP_20169577.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE211]
gi|432985050|ref|ZP_20173779.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE215]
gi|432990392|ref|ZP_20179058.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE217]
gi|432995033|ref|ZP_20183647.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE218]
gi|432999556|ref|ZP_20188089.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE223]
gi|433004827|ref|ZP_20193260.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE227]
gi|433007328|ref|ZP_20195748.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE229]
gi|433013499|ref|ZP_20201869.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE104]
gi|433018246|ref|ZP_20206500.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE105]
gi|433023141|ref|ZP_20211149.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE106]
gi|433032889|ref|ZP_20220647.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE112]
gi|433038295|ref|ZP_20225903.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE113]
gi|433042761|ref|ZP_20230277.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE117]
gi|433047406|ref|ZP_20234806.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE120]
gi|433052644|ref|ZP_20239859.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE122]
gi|433057613|ref|ZP_20244690.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE124]
gi|433062512|ref|ZP_20249460.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE125]
gi|433067594|ref|ZP_20254405.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE128]
gi|433072300|ref|ZP_20258987.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE129]
gi|433077453|ref|ZP_20264010.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE131]
gi|433082238|ref|ZP_20268709.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE133]
gi|433086880|ref|ZP_20273270.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE137]
gi|433096167|ref|ZP_20282374.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE139]
gi|433100830|ref|ZP_20286932.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE145]
gi|433105431|ref|ZP_20291442.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE148]
gi|433110555|ref|ZP_20296424.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE150]
gi|433115190|ref|ZP_20301001.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE153]
gi|433119816|ref|ZP_20305514.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE157]
gi|433124813|ref|ZP_20310394.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE160]
gi|433129630|ref|ZP_20315090.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE163]
gi|433134429|ref|ZP_20319793.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE166]
gi|433138873|ref|ZP_20324151.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE167]
gi|433143887|ref|ZP_20329046.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE168]
gi|433148814|ref|ZP_20333858.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE174]
gi|433153423|ref|ZP_20338384.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE176]
gi|433158265|ref|ZP_20343123.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE177]
gi|433163120|ref|ZP_20347874.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE179]
gi|433168179|ref|ZP_20352833.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE180]
gi|433173098|ref|ZP_20357643.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE232]
gi|433177804|ref|ZP_20362243.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE82]
gi|433182788|ref|ZP_20367076.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE85]
gi|433188058|ref|ZP_20372170.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE88]
gi|433193279|ref|ZP_20377286.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE90]
gi|433197913|ref|ZP_20381829.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE94]
gi|433202847|ref|ZP_20386635.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE95]
gi|433207404|ref|ZP_20391096.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE97]
gi|433212176|ref|ZP_20395784.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE99]
gi|433324703|ref|ZP_20401955.1| transcriptional regulator CysB [Escherichia coli J96]
gi|442593744|ref|ZP_21011677.1| Cys regulon transcriptional activator CysB [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442599634|ref|ZP_21017344.1| Cys regulon transcriptional activator CysB [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442607688|ref|ZP_21022453.1| Cys regulon transcriptional activator CysB [Escherichia coli Nissle
1917]
gi|443617363|ref|YP_007381219.1| transcriptional regulator CysB [Escherichia coli APEC O78]
gi|444924361|ref|ZP_21243836.1| HTH-type transcriptional regulator CysB [Escherichia coli
09BKT078844]
gi|444930333|ref|ZP_21249434.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0814]
gi|444935603|ref|ZP_21254468.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0815]
gi|444941252|ref|ZP_21259840.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0816]
gi|444946853|ref|ZP_21265221.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0839]
gi|444952428|ref|ZP_21270586.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0848]
gi|444957900|ref|ZP_21275826.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1753]
gi|444963214|ref|ZP_21280897.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1775]
gi|444968891|ref|ZP_21286315.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1793]
gi|444974351|ref|ZP_21291559.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1805]
gi|444979851|ref|ZP_21296806.1| HTH-type transcriptional regulator CysB [Escherichia coli ATCC
700728]
gi|444985148|ref|ZP_21301973.1| HTH-type transcriptional regulator CysB [Escherichia coli PA11]
gi|444990447|ref|ZP_21307141.1| HTH-type transcriptional regulator CysB [Escherichia coli PA19]
gi|444995690|ref|ZP_21312240.1| HTH-type transcriptional regulator CysB [Escherichia coli PA13]
gi|445001318|ref|ZP_21317744.1| HTH-type transcriptional regulator CysB [Escherichia coli PA2]
gi|445006741|ref|ZP_21323037.1| HTH-type transcriptional regulator CysB [Escherichia coli PA47]
gi|445011877|ref|ZP_21328029.1| HTH-type transcriptional regulator CysB [Escherichia coli PA48]
gi|445017636|ref|ZP_21333641.1| HTH-type transcriptional regulator CysB [Escherichia coli PA8]
gi|445023221|ref|ZP_21339096.1| HTH-type transcriptional regulator CysB [Escherichia coli 7.1982]
gi|445028458|ref|ZP_21344188.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1781]
gi|445033939|ref|ZP_21349513.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1762]
gi|445039605|ref|ZP_21355027.1| HTH-type transcriptional regulator CysB [Escherichia coli PA35]
gi|445044748|ref|ZP_21360048.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.4880]
gi|445050415|ref|ZP_21365528.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0083]
gi|445056132|ref|ZP_21371036.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0670]
gi|450187930|ref|ZP_21890064.1| transcriptional regulator CysB [Escherichia coli SEPT362]
gi|450213723|ref|ZP_21894997.1| transcriptional regulator CysB [Escherichia coli O08]
gi|450242643|ref|ZP_21899853.1| transcriptional regulator CysB [Escherichia coli S17]
gi|452967977|ref|ZP_21966204.1| CysB family transcriptional regulator [Escherichia coli O157:H7
str. EC4009]
gi|71152741|sp|P0A9F5.1|CYSB_ECO57 RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|71152742|sp|P0A9F4.1|CYSB_ECOL6 RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|71152743|sp|P0A9F3.1|CYSB_ECOLI RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|12515519|gb|AAG56540.1|AE005379_8 positive transcriptional regulator for cysteine regulon
[Escherichia coli O157:H7 str. EDL933]
gi|26108008|gb|AAN80208.1|AE016760_67 Cys regulon transcriptional activator [Escherichia coli CFT073]
gi|145665|gb|AAA23642.1| cysB regulatory protein [Escherichia coli]
gi|145667|gb|AAA23643.1| cysteine regulatory protein (cysB) [Escherichia coli]
gi|1742086|dbj|BAA14827.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli str. K12
substr. W3110]
gi|1787530|gb|AAC74357.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli str. K-12
substr. MG1655]
gi|13361312|dbj|BAB35270.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli O157:H7 str. Sakai]
gi|81245680|gb|ABB66388.1| positive transcriptional regulator for cysteine regulon [Shigella
boydii Sb227]
gi|91072141|gb|ABE07022.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli UTI89]
gi|110343100|gb|ABG69337.1| cys regulon transcriptional activator [Escherichia coli 536]
gi|115512659|gb|ABJ00734.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157066460|gb|ABV05715.1| HTH-type transcriptional regulator CysB [Escherichia coli HS]
gi|157079618|gb|ABV19326.1| HTH-type transcriptional regulator CysB [Escherichia coli E24377A]
gi|169755289|gb|ACA77988.1| transcriptional regulator, LysR family [Escherichia coli ATCC 8739]
gi|169888787|gb|ACB02494.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli str. K-12
substr. DH10B]
gi|187428074|gb|ACD07348.1| HTH-type transcriptional regulator CysB [Shigella boydii CDC
3083-94]
gi|187769279|gb|EDU33123.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4196]
gi|188014764|gb|EDU52886.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4113]
gi|188491247|gb|EDU66350.1| HTH-type transcriptional regulator CysB [Escherichia coli 53638]
gi|188998962|gb|EDU67948.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4076]
gi|189359957|gb|EDU78376.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4486]
gi|189366226|gb|EDU84642.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4501]
gi|190903333|gb|EDV63054.1| HTH-type transcriptional regulator CysB [Escherichia coli B7A]
gi|190908639|gb|EDV68227.1| HTH-type transcriptional regulator CysB [Escherichia coli F11]
gi|192931733|gb|EDV84333.1| HTH-type transcriptional regulator CysB [Escherichia coli E22]
gi|192956708|gb|EDV87163.1| HTH-type transcriptional regulator CysB [Escherichia coli E110019]
gi|194415824|gb|EDX32090.1| HTH-type transcriptional regulator CysB [Escherichia coli B171]
gi|194416419|gb|EDX32581.1| HTH-type transcriptional regulator CysB [Shigella dysenteriae 1012]
gi|194424053|gb|EDX40041.1| HTH-type transcriptional regulator CysB [Escherichia coli 101-1]
gi|208724585|gb|EDZ74293.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4206]
gi|208732998|gb|EDZ81686.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4045]
gi|208739516|gb|EDZ87198.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4042]
gi|209160590|gb|ACI38023.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. EC4115]
gi|209771958|gb|ACI84291.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|209771960|gb|ACI84292.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|209771962|gb|ACI84293.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|209771964|gb|ACI84294.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|209771966|gb|ACI84295.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|209911773|dbj|BAG76847.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli SE11]
gi|215264642|emb|CAS09013.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli O127:H6 str.
E2348/69]
gi|217317662|gb|EEC26090.1| HTH-type transcriptional regulator CysB [Escherichia coli O157:H7
str. TW14588]
gi|218351579|emb|CAU97291.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli 55989]
gi|218360596|emb|CAQ98154.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli IAI1]
gi|218365032|emb|CAR02735.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli S88]
gi|218426830|emb|CAR07680.2| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli ED1a]
gi|218431896|emb|CAR12781.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli UMN026]
gi|222033079|emb|CAP75819.1| HTH-type transcriptional regulator cysB [Escherichia coli LF82]
gi|226900057|gb|EEH86316.1| transcriptional regulator CysB [Escherichia sp. 3_2_53FAA]
gi|238860946|gb|ACR62944.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli BW2952]
gi|242377053|emb|CAQ31778.1| CysB transcriptional dual regulator [Escherichia coli BL21(DE3)]
gi|253324772|gb|ACT29374.1| transcriptional regulator, LysR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973256|gb|ACT38927.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli B str.
REL606]
gi|253977470|gb|ACT43140.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli BL21(DE3)]
gi|254592263|gb|ACT71624.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli O157:H7 str.
TW14359]
gi|257753621|dbj|BAI25123.1| DNA-binding transcriptional dual regulator CysB,
O-acetyl-L-serine-binding [Escherichia coli O26:H11 str.
11368]
gi|257758769|dbj|BAI30266.1| DNA-binding transcriptional dual regulator CysB,
O-acetyl-L-serine-binding [Escherichia coli O103:H2 str.
12009]
gi|257764079|dbj|BAI35574.1| DNA-binding transcriptional dual regulator CysB,
O-acetyl-L-serine-binding [Escherichia coli O111:H- str.
11128]
gi|260449595|gb|ACX40017.1| transcriptional regulator, LysR family [Escherichia coli DH1]
gi|281178465|dbj|BAI54795.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli SE15]
gi|284921156|emb|CBG34222.1| cys regulon transcriptiona activator [Escherichia coli 042]
gi|290762235|gb|ADD56196.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
CB9615]
gi|291324453|gb|EFE63875.1| HTH-type transcriptional regulator cysB [Escherichia coli B088]
gi|291427024|gb|EFF00051.1| Cys regulon transcriptional activator CysB [Escherichia coli
FVEC1412]
gi|291434665|gb|EFF07638.1| HTH-type transcriptional regulator cysB [Escherichia coli B185]
gi|291470132|gb|EFF12616.1| Cys regulon transcriptional activator CysB [Escherichia coli B354]
gi|294492419|gb|ADE91175.1| HTH-type transcriptional regulator CysB [Escherichia coli IHE3034]
gi|299881089|gb|EFI89300.1| cys regulon transcriptional activator CysB [Escherichia coli MS
196-1]
gi|300301849|gb|EFJ58234.1| cys regulon transcriptional activator CysB [Escherichia coli MS
185-1]
gi|300309307|gb|EFJ63827.1| cys regulon transcriptional activator CysB [Escherichia coli MS
200-1]
gi|300317260|gb|EFJ67044.1| cys regulon transcriptional activator CysB [Escherichia coli MS
175-1]
gi|300358908|gb|EFJ74778.1| cys regulon transcriptional activator CysB [Escherichia coli MS
198-1]
gi|300400138|gb|EFJ83676.1| cys regulon transcriptional activator CysB [Escherichia coli MS
69-1]
gi|300403892|gb|EFJ87430.1| cys regulon transcriptional activator CysB [Escherichia coli MS
84-1]
gi|300411203|gb|EFJ94741.1| cys regulon transcriptional activator CysB [Escherichia coli MS
45-1]
gi|300413478|gb|EFJ96788.1| cys regulon transcriptional activator CysB [Escherichia coli MS
115-1]
gi|300417324|gb|EFK00635.1| cys regulon transcriptional activator CysB [Escherichia coli MS
182-1]
gi|300448857|gb|EFK12477.1| cys regulon transcriptional activator CysB [Escherichia coli MS
116-1]
gi|300464174|gb|EFK27667.1| cys regulon transcriptional activator CysB [Escherichia coli MS
187-1]
gi|300524979|gb|EFK46048.1| cys regulon transcriptional activator CysB [Escherichia coli MS
119-7]
gi|300528476|gb|EFK49538.1| cys regulon transcriptional activator CysB [Escherichia coli MS
107-1]
gi|300839895|gb|EFK67655.1| cys regulon transcriptional activator CysB [Escherichia coli MS
124-1]
gi|300846382|gb|EFK74142.1| cys regulon transcriptional activator CysB [Escherichia coli MS
78-1]
gi|305852976|gb|EFM53421.1| transcriptional regulator CysB [Escherichia coli NC101]
gi|306909690|gb|EFN40184.1| transcriptional regulator, LysR family [Escherichia coli W]
gi|307553334|gb|ADN46109.1| HTH-type transcriptional regulator CysB [Escherichia coli ABU
83972]
gi|307627151|gb|ADN71455.1| transcriptional regulator CysB [Escherichia coli UM146]
gi|308122840|gb|EFO60102.1| cys regulon transcriptional activator CysB [Escherichia coli MS
145-7]
gi|309701573|emb|CBJ00880.1| cys regulon transcriptiona activator [Escherichia coli ETEC H10407]
gi|310336062|gb|EFQ01262.1| HTH-type transcriptional regulator cysB [Escherichia coli 1827-70]
gi|312288260|gb|EFR16162.1| HTH-type transcriptional regulator cysB [Escherichia coli 2362-75]
gi|312945909|gb|ADR26736.1| transcriptional regulator CysB [Escherichia coli O83:H1 str. NRG
857C]
gi|315060526|gb|ADT74853.1| DNA-binding protein transcriptional dual regulator,
O-acetyl-L-serine-binding protein [Escherichia coli W]
gi|315135911|dbj|BAJ43070.1| transcriptional regulator CysB [Escherichia coli DH1]
gi|315252507|gb|EFU32475.1| cys regulon transcriptional activator CysB [Escherichia coli MS
85-1]
gi|315289113|gb|EFU48511.1| cys regulon transcriptional activator CysB [Escherichia coli MS
110-3]
gi|315295319|gb|EFU54649.1| cys regulon transcriptional activator CysB [Escherichia coli MS
153-1]
gi|315297188|gb|EFU56468.1| cys regulon transcriptional activator CysB [Escherichia coli MS
16-3]
gi|315619353|gb|EFU99897.1| HTH-type transcriptional regulator cysB [Escherichia coli 3431]
gi|320181717|gb|EFW56628.1| Cys regulon transcriptional activator CysB [Shigella boydii ATCC
9905]
gi|320189974|gb|EFW64626.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. EC1212]
gi|320195712|gb|EFW70337.1| Cys regulon transcriptional activator CysB [Escherichia coli
WV_060327]
gi|320199309|gb|EFW73900.1| Cys regulon transcriptional activator CysB [Escherichia coli
EC4100B]
gi|320637169|gb|EFX06995.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
G5101]
gi|320642535|gb|EFX11783.1| transcriptional regulator CysB [Escherichia coli O157:H- str.
493-89]
gi|320647888|gb|EFX16596.1| transcriptional regulator CysB [Escherichia coli O157:H- str. H
2687]
gi|320653490|gb|EFX21595.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659190|gb|EFX26779.1| transcriptional regulator CysB [Escherichia coli O55:H7 str. USDA
5905]
gi|320663983|gb|EFX31170.1| transcriptional regulator CysB [Escherichia coli O157:H7 str.
LSU-61]
gi|323153293|gb|EFZ39551.1| HTH-type transcriptional regulator cysB [Escherichia coli EPECa14]
gi|323162364|gb|EFZ48219.1| HTH-type transcriptional regulator cysB [Escherichia coli E128010]
gi|323168249|gb|EFZ53934.1| HTH-type transcriptional regulator cysB [Shigella sonnei 53G]
gi|323179773|gb|EFZ65334.1| HTH-type transcriptional regulator cysB [Escherichia coli OK1180]
gi|323185567|gb|EFZ70928.1| HTH-type transcriptional regulator cysB [Escherichia coli OK1357]
gi|323187506|gb|EFZ72815.1| HTH-type transcriptional regulator cysB [Escherichia coli RN587/1]
gi|323378912|gb|ADX51180.1| transcriptional regulator, LysR family [Escherichia coli KO11FL]
gi|323937596|gb|EGB33864.1| LysR substrate binding domain-containing protein [Escherichia coli
E1520]
gi|323942389|gb|EGB38559.1| LysR substrate binding domain-containing protein [Escherichia coli
E482]
gi|323949122|gb|EGB45014.1| LysR substrate binding domain-containing protein [Escherichia coli
H252]
gi|323953854|gb|EGB49655.1| LysR substrate binding domain-containing protein [Escherichia coli
H263]
gi|323962575|gb|EGB58155.1| LysR substrate binding domain-containing protein [Escherichia coli
H489]
gi|323964614|gb|EGB60087.1| LysR substrate binding domain-containing protein [Escherichia coli
M863]
gi|323973485|gb|EGB68671.1| LysR substrate binding domain-containing protein [Escherichia coli
TA007]
gi|323977092|gb|EGB72179.1| LysR substrate binding domain-containing protein [Escherichia coli
TW10509]
gi|324006114|gb|EGB75333.1| cys regulon transcriptional activator CysB [Escherichia coli MS
57-2]
gi|324011311|gb|EGB80530.1| cys regulon transcriptional activator CysB [Escherichia coli MS
60-1]
gi|324018882|gb|EGB88101.1| cys regulon transcriptional activator CysB [Escherichia coli MS
117-3]
gi|326341065|gb|EGD64858.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. 1125]
gi|326343305|gb|EGD67072.1| Cys regulon transcriptional activator CysB [Escherichia coli
O157:H7 str. 1044]
gi|327253967|gb|EGE65596.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_7v]
gi|330911141|gb|EGH39651.1| cys regulon transcriptional activator CysB [Escherichia coli AA86]
gi|331038631|gb|EGI10851.1| HTH-type transcriptional regulator CysB [Escherichia coli H736]
gi|331045350|gb|EGI17477.1| HTH-type transcriptional regulator CysB [Escherichia coli M605]
gi|331050593|gb|EGI22651.1| HTH-type transcriptional regulator CysB [Escherichia coli M718]
gi|331055570|gb|EGI27579.1| HTH-type transcriptional regulator CysB [Escherichia coli TA206]
gi|331061109|gb|EGI33073.1| HTH-type transcriptional regulator CysB [Escherichia coli TA143]
gi|331065245|gb|EGI37140.1| HTH-type transcriptional regulator CysB [Escherichia coli TA271]
gi|331070022|gb|EGI41391.1| HTH-type transcriptional regulator CysB [Escherichia coli TA280]
gi|331075742|gb|EGI47040.1| HTH-type transcriptional regulator CysB [Escherichia coli H591]
gi|331080393|gb|EGI51572.1| HTH-type transcriptional regulator CysB [Escherichia coli H299]
gi|332091667|gb|EGI96747.1| HTH-type transcriptional regulator cysB [Shigella boydii 5216-82]
gi|332097861|gb|EGJ02834.1| HTH-type transcriptional regulator cysB [Shigella dysenteriae
155-74]
gi|332101885|gb|EGJ05231.1| transcriptional regulator CysB [Shigella sp. D9]
gi|332342867|gb|AEE56201.1| HTH-type transcriptional regulator protein CysB [Escherichia coli
UMNK88]
gi|333969484|gb|AEG36289.1| Transcriptional regulator CysB [Escherichia coli NA114]
gi|338770554|gb|EGP25314.1| HTH-type transcriptional regulator CysB [Escherichia coli PCN033]
gi|339414605|gb|AEJ56277.1| HTH-type transcriptional regulator cysB [Escherichia coli UMNF18]
gi|340734644|gb|EGR63756.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
01-09591]
gi|341921310|gb|EGT70911.1| hypothetical protein C22711_4945 [Escherichia coli O104:H4 str.
C227-11]
gi|342363949|gb|EGU28053.1| transcriptional regulator CysB [Escherichia coli XH140A]
gi|342928881|gb|EGU97603.1| HTH-type transcriptional regulator CysB [Escherichia coli MS 79-10]
gi|344194165|gb|EGV48240.1| transcriptional regulator CysB [Escherichia coli XH001]
gi|345339364|gb|EGW71790.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_C165-02]
gi|345340199|gb|EGW72619.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_B2F1]
gi|345342300|gb|EGW74697.1| HTH-type transcriptional regulator cysB [Escherichia coli 2534-86]
gi|345351319|gb|EGW83582.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_94C]
gi|345357080|gb|EGW89279.1| HTH-type transcriptional regulator cysB [Escherichia coli 3030-1]
gi|345360284|gb|EGW92454.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_DG131-3]
gi|345364087|gb|EGW96223.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_EH250]
gi|345374945|gb|EGX06895.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_MHI813]
gi|345379271|gb|EGX11185.1| HTH-type transcriptional regulator cysB [Escherichia coli G58-1]
gi|345380272|gb|EGX12172.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_H.1.8]
gi|345388891|gb|EGX18700.1| HTH-type transcriptional regulator cysB [Escherichia coli
STEC_S1191]
gi|345394431|gb|EGX24191.1| HTH-type transcriptional regulator cysB [Escherichia coli TX1999]
gi|354865216|gb|EHF25645.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. C236-11]
gi|354870218|gb|EHF30623.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. C227-11]
gi|354872009|gb|EHF32406.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 04-8351]
gi|354875509|gb|EHF35875.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 09-7901]
gi|354876056|gb|EHF36418.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4404]
gi|354881532|gb|EHF41861.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4522]
gi|354881986|gb|EHF42313.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-3677]
gi|354897944|gb|EHF58100.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354900039|gb|EHF60175.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4623]
gi|354902634|gb|EHF62751.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354904117|gb|EHF64211.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354914873|gb|EHF74854.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354920432|gb|EHF80366.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-4632 C4]
gi|355352198|gb|EHG01382.1| transcriptional regulator CysB [Escherichia coli cloneA_i1]
gi|355419951|gb|AER84148.1| transcriptional regulator CysB [Escherichia coli str. 'clone D i2']
gi|355424871|gb|AER89067.1| transcriptional regulator CysB [Escherichia coli str. 'clone D
i14']
gi|359331892|dbj|BAL38339.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Escherichia coli str. K-12
substr. MDS42]
gi|371594525|gb|EHN83388.1| HTH-type transcriptional regulator CysB [Escherichia coli TA124]
gi|371596393|gb|EHN85231.1| HTH-type transcriptional regulator CysB [Escherichia coli H494]
gi|371613266|gb|EHO01766.1| HTH-type transcriptional regulator cysB [Escherichia coli H397]
gi|371613654|gb|EHO02147.1| hypothetical protein ESOG_02556 [Escherichia coli E101]
gi|374358459|gb|AEZ40166.1| transcriptional regulator CysB [Escherichia coli O55:H7 str.
RM12579]
gi|375323380|gb|EHS69092.1| transcriptional regulator CysB [Escherichia coli O157:H43 str. T22]
gi|377846603|gb|EHU11613.1| cysB [Escherichia coli DEC1A]
gi|377848219|gb|EHU13213.1| cysB [Escherichia coli DEC1C]
gi|377851356|gb|EHU16305.1| cysB [Escherichia coli DEC1B]
gi|377859962|gb|EHU24789.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC1D]
gi|377864309|gb|EHU29106.1| cysB [Escherichia coli DEC1E]
gi|377866377|gb|EHU31149.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC2A]
gi|377877258|gb|EHU41855.1| cysB [Escherichia coli DEC2B]
gi|377882349|gb|EHU46894.1| cysB [Escherichia coli DEC2D]
gi|377895955|gb|EHU60361.1| cysB [Escherichia coli DEC2E]
gi|377896107|gb|EHU60512.1| cysB [Escherichia coli DEC3A]
gi|377896410|gb|EHU60808.1| cysB [Escherichia coli DEC3B]
gi|377912921|gb|EHU77068.1| cysB [Escherichia coli DEC3D]
gi|377915733|gb|EHU79841.1| cysB [Escherichia coli DEC3E]
gi|377930164|gb|EHU94051.1| cysB [Escherichia coli DEC4A]
gi|377934916|gb|EHU98742.1| cysB [Escherichia coli DEC4B]
gi|377945199|gb|EHV08896.1| cysB [Escherichia coli DEC4C]
gi|377945706|gb|EHV09397.1| cysB [Escherichia coli DEC4D]
gi|377951035|gb|EHV14655.1| cysB [Escherichia coli DEC4E]
gi|377959814|gb|EHV23309.1| cysB [Escherichia coli DEC4F]
gi|377964010|gb|EHV27450.1| cysB [Escherichia coli DEC5A]
gi|377969524|gb|EHV32900.1| cysB [Escherichia coli DEC5B]
gi|377976734|gb|EHV40036.1| cysB [Escherichia coli DEC5C]
gi|377977945|gb|EHV41226.1| cysB [Escherichia coli DEC5D]
gi|377985863|gb|EHV49072.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC5E]
gi|377996235|gb|EHV59343.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6A]
gi|377998027|gb|EHV61124.1| cysB [Escherichia coli DEC6B]
gi|378001100|gb|EHV64160.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6C]
gi|378010160|gb|EHV73106.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC6D]
gi|378012595|gb|EHV75523.1| cysB [Escherichia coli DEC6E]
gi|378017739|gb|EHV80609.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC7A]
gi|378026258|gb|EHV88897.1| cysB [Escherichia coli DEC7C]
gi|378031276|gb|EHV93864.1| cysB [Escherichia coli DEC7D]
gi|378035747|gb|EHV98300.1| cysB [Escherichia coli DEC7B]
gi|378041186|gb|EHW03649.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC7E]
gi|378049846|gb|EHW12182.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC8A]
gi|378052864|gb|EHW15165.1| cysB [Escherichia coli DEC8B]
gi|378057227|gb|EHW19461.1| cysB [Escherichia coli DEC8C]
gi|378065144|gb|EHW27293.1| cysB [Escherichia coli DEC8D]
gi|378068684|gb|EHW30780.1| cysB [Escherichia coli DEC8E]
gi|378077797|gb|EHW39790.1| cysB [Escherichia coli DEC9A]
gi|378080142|gb|EHW42107.1| cysB [Escherichia coli DEC9B]
gi|378086006|gb|EHW47886.1| cysB [Escherichia coli DEC9C]
gi|378093053|gb|EHW54871.1| cysB [Escherichia coli DEC9D]
gi|378097733|gb|EHW59480.1| cysB [Escherichia coli DEC9E]
gi|378103077|gb|EHW64748.1| cysB [Escherichia coli DEC10A]
gi|378109830|gb|EHW71430.1| cysB [Escherichia coli DEC10B]
gi|378114056|gb|EHW75614.1| cysB [Escherichia coli DEC10C]
gi|378119462|gb|EHW80955.1| cysB [Escherichia coli DEC10D]
gi|378132717|gb|EHW94069.1| cysB [Escherichia coli DEC10E]
gi|378133544|gb|EHW94889.1| cysB [Escherichia coli DEC11A]
gi|378135749|gb|EHW97051.1| cysB [Escherichia coli DEC10F]
gi|378143324|gb|EHX04516.1| cysB [Escherichia coli DEC11B]
gi|378151158|gb|EHX12271.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11D]
gi|378153236|gb|EHX14321.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11C]
gi|378159598|gb|EHX20602.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC11E]
gi|378171188|gb|EHX32060.1| cysB [Escherichia coli DEC12B]
gi|378172949|gb|EHX33796.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC12A]
gi|378174443|gb|EHX35269.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC12C]
gi|378186220|gb|EHX46843.1| cysB [Escherichia coli DEC12D]
gi|378189391|gb|EHX49985.1| cysB [Escherichia coli DEC13A]
gi|378192744|gb|EHX53299.1| cysB [Escherichia coli DEC12E]
gi|378203557|gb|EHX63979.1| cysB [Escherichia coli DEC13B]
gi|378205495|gb|EHX65909.1| cysB [Escherichia coli DEC13C]
gi|378206184|gb|EHX66590.1| cysB [Escherichia coli DEC13D]
gi|378215955|gb|EHX76246.1| cysB [Escherichia coli DEC13E]
gi|378221262|gb|EHX81513.1| HTH-type transcriptional regulator CysB [Escherichia coli DEC14A]
gi|378222776|gb|EHX83011.1| cysB [Escherichia coli DEC14B]
gi|378230458|gb|EHX90576.1| cysB [Escherichia coli DEC14C]
gi|378233955|gb|EHX94038.1| cysB [Escherichia coli DEC14D]
gi|378239578|gb|EHX99558.1| cysB [Escherichia coli DEC15A]
gi|378248470|gb|EHY08384.1| cysB [Escherichia coli DEC15B]
gi|378249167|gb|EHY09077.1| cysB [Escherichia coli DEC15C]
gi|378255825|gb|EHY15680.1| cysB [Escherichia coli DEC15D]
gi|378260389|gb|EHY20194.1| cysB [Escherichia coli DEC15E]
gi|380348641|gb|EIA36920.1| transcriptional regulator CysB [Escherichia coli SCI-07]
gi|383103156|gb|AFG40665.1| HTH-type transcriptional regulator cysB [Escherichia coli P12b]
gi|383393302|gb|AFH18260.1| transcriptional regulator CysB [Escherichia coli KO11FL]
gi|383404753|gb|AFH10996.1| transcriptional regulator CysB [Escherichia coli W]
gi|384473093|gb|EIE57138.1| transcriptional regulator CysB [Escherichia coli AI27]
gi|385155701|gb|EIF17702.1| transcriptional regulator CysB [Escherichia coli O32:H37 str. P4]
gi|385539060|gb|EIF85901.1| HTH-type transcriptional regulator CysB [Escherichia coli M919]
gi|385704598|gb|EIG41671.1| HTH-type transcriptional regulator CysB [Escherichia coli H730]
gi|385706111|gb|EIG43165.1| HTH-type transcriptional regulator CysB [Escherichia coli B799]
gi|386122352|gb|EIG70963.1| HTH-type transcriptional regulator CysB [Escherichia sp. 4_1_40B]
gi|386142666|gb|EIG83804.1| HTH-type transcriptional regulator CysB [Escherichia coli 1.2741]
gi|386145332|gb|EIG91792.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0246]
gi|386149890|gb|EIH01179.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.0588]
gi|386159210|gb|EIH15543.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0259]
gi|386167779|gb|EIH34295.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0497]
gi|386175303|gb|EIH47294.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0741]
gi|386180564|gb|EIH58038.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.2608]
gi|386185201|gb|EIH67934.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0624]
gi|386188163|gb|EIH76971.1| HTH-type transcriptional regulator CysB [Escherichia coli 4.0522]
gi|386198136|gb|EIH92321.1| HTH-type transcriptional regulator CysB [Escherichia coli JB1-95]
gi|386202198|gb|EII01189.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.154]
gi|386203830|gb|EII08348.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.0959]
gi|386212935|gb|EII23375.1| HTH-type transcriptional regulator CysB [Escherichia coli 9.0111]
gi|386215930|gb|EII32422.1| HTH-type transcriptional regulator CysB [Escherichia coli 4.0967]
gi|386223567|gb|EII45928.1| HTH-type transcriptional regulator CysB [Escherichia coli 2.3916]
gi|386231000|gb|EII58348.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.3884]
gi|386232960|gb|EII64945.1| HTH-type transcriptional regulator CysB [Escherichia coli 2.4168]
gi|386239000|gb|EII75935.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.2303]
gi|386243107|gb|EII84840.1| HTH-type transcriptional regulator CysB [Escherichia coli 3003]
gi|386247206|gb|EII93379.1| HTH-type transcriptional regulator CysB [Escherichia coli TW07793]
gi|386255666|gb|EIJ05354.1| HTH-type transcriptional regulator CysB [Escherichia coli B41]
gi|386258750|gb|EIJ14227.1| HTH-type transcriptional regulator CysB [Escherichia coli 900105
(10e)]
gi|386795790|gb|AFJ28824.1| transcriptional regulator CysB [Escherichia coli Xuzhou21]
gi|388335079|gb|EIL01656.1| transcriptional regulator CysB [Escherichia coli O103:H25 str.
CVM9340]
gi|388336144|gb|EIL02692.1| transcriptional regulator CysB [Escherichia coli O103:H2 str.
CVM9450]
gi|388343111|gb|EIL09104.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9534]
gi|388351408|gb|EIL16648.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9570]
gi|388354840|gb|EIL19725.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9574]
gi|388371148|gb|EIL34638.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9545]
gi|388374376|gb|EIL37534.1| hypothetical protein ECO10026_27812 [Escherichia coli O26:H11 str.
CVM10026]
gi|388377537|gb|EIL40339.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM9942]
gi|388385159|gb|EIL46859.1| transcriptional regulator CysB [Escherichia coli KD1]
gi|388388764|gb|EIL50321.1| transcriptional regulator CysB [Escherichia coli 541-15]
gi|388391253|gb|EIL52725.1| transcriptional regulator CysB [Escherichia coli KD2]
gi|388400665|gb|EIL61383.1| transcriptional regulator CysB [Escherichia coli 576-1]
gi|388405823|gb|EIL66240.1| transcriptional regulator CysB [Escherichia coli 541-1]
gi|388414001|gb|EIL73977.1| transcriptional regulator CysB [Escherichia coli CUMT8]
gi|388414302|gb|EIL74266.1| transcriptional regulator CysB [Escherichia coli HM605]
gi|390646816|gb|EIN25818.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1996]
gi|390647287|gb|EIN26196.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA517]
gi|390647797|gb|EIN26641.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA505]
gi|390665486|gb|EIN42786.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 93-001]
gi|390667332|gb|EIN44351.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1985]
gi|390667455|gb|EIN44470.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1990]
gi|390684202|gb|EIN59827.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA3]
gi|390686564|gb|EIN61910.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA5]
gi|390687135|gb|EIN62423.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA9]
gi|390704070|gb|EIN78056.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA10]
gi|390704900|gb|EIN78724.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA15]
gi|390705532|gb|EIN79251.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA14]
gi|390716896|gb|EIN89689.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA22]
gi|390728520|gb|EIO00815.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA25]
gi|390729040|gb|EIO01287.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA24]
gi|390730960|gb|EIO02904.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA28]
gi|390747173|gb|EIO17753.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA31]
gi|390747964|gb|EIO18501.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA32]
gi|390749389|gb|EIO19656.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA33]
gi|390771175|gb|EIO39878.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA41]
gi|390773046|gb|EIO41518.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA42]
gi|390773635|gb|EIO41995.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA39]
gi|390783692|gb|EIO51290.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW06591]
gi|390791830|gb|EIO59193.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW10246]
gi|390798716|gb|EIO65904.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW07945]
gi|390799298|gb|EIO66468.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW11039]
gi|390809146|gb|EIO75948.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09109]
gi|390813130|gb|EIO79773.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09098]
gi|390817292|gb|EIO83728.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW10119]
gi|390832127|gb|EIO97437.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4203]
gi|390834426|gb|EIO99381.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW09195]
gi|390835499|gb|EIP00259.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4196]
gi|390851659|gb|EIP14922.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW14301]
gi|390852854|gb|EIP15989.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW14313]
gi|390853665|gb|EIP16643.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4421]
gi|390866112|gb|EIP28092.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4422]
gi|390869572|gb|EIP31202.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4013]
gi|390877090|gb|EIP38042.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4402]
gi|390882213|gb|EIP42756.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4439]
gi|390886720|gb|EIP46801.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4436]
gi|390899576|gb|EIP58814.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4437]
gi|390901929|gb|EIP61072.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1738]
gi|390903341|gb|EIP62393.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC4448]
gi|390909906|gb|EIP68670.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1734]
gi|390921827|gb|EIP79946.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1863]
gi|390923100|gb|EIP81070.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1845]
gi|391283436|gb|EIQ42056.1| HTH-type transcriptional regulator CysB [Shigella sonnei 3226-85]
gi|391285842|gb|EIQ44414.1| HTH-type transcriptional regulator CysB [Shigella sonnei 3233-85]
gi|391307322|gb|EIQ65056.1| HTH-type transcriptional regulator CysB [Escherichia coli EPECa12]
gi|391314052|gb|EIQ71619.1| cysB [Escherichia coli EPEC C342-62]
gi|394381374|gb|EJE59068.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9634]
gi|394392504|gb|EJE69286.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CVM9602]
gi|394395322|gb|EJE71794.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10224]
gi|394401161|gb|EJE77007.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9455]
gi|394409797|gb|EJE84257.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10021]
gi|394415398|gb|EJE89265.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CVM9553]
gi|394428009|gb|EJF00618.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM9952]
gi|394432695|gb|EJF04762.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CVM10030]
gi|397785999|gb|EJK96842.1| HTH-type transcriptional regulator cysB [Escherichia coli STEC_O31]
gi|397900413|gb|EJL16774.1| cysB [Shigella sonnei str. Moseley]
gi|404291823|gb|EJZ48676.1| HTH-type transcriptional regulator CysB [Escherichia sp. 1_1_43]
gi|404340975|gb|EJZ67388.1| cysB [Shigella flexneri 1485-80]
gi|406778047|gb|AFS57471.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054630|gb|AFS74681.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065039|gb|AFS86086.1| transcriptional regulator CysB [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408068621|gb|EKH03037.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA7]
gi|408072179|gb|EKH06501.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK920]
gi|408079815|gb|EKH13917.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA34]
gi|408084275|gb|EKH18058.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA506]
gi|408086626|gb|EKH20148.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA507]
gi|408096890|gb|EKH29811.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FDA504]
gi|408102001|gb|EKH34418.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1999]
gi|408109426|gb|EKH41351.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK1997]
gi|408121503|gb|EKH52460.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE037]
gi|408126547|gb|EKH57106.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK2001]
gi|408132056|gb|EKH62065.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA4]
gi|408144415|gb|EKH73652.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA23]
gi|408146311|gb|EKH75448.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA49]
gi|408149826|gb|EKH78484.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA45]
gi|408160557|gb|EKH88566.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TT12B]
gi|408165249|gb|EKH92943.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli MA6]
gi|408167469|gb|EKH94980.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 5905]
gi|408179006|gb|EKI05696.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli CB7326]
gi|408185542|gb|EKI11714.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC96038]
gi|408185879|gb|EKI12001.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 5412]
gi|408195059|gb|EKI20488.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW15901]
gi|408204030|gb|EKI29031.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli TW00353]
gi|408204893|gb|EKI29799.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli ARS4.2123]
gi|408215952|gb|EKI40305.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 3006]
gi|408218325|gb|EKI42553.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 07798]
gi|408222533|gb|EKI46390.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA38]
gi|408230337|gb|EKI53736.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli N1]
gi|408232006|gb|EKI55265.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1735]
gi|408243587|gb|EKI66099.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1736]
gi|408246925|gb|EKI69159.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1737]
gi|408251520|gb|EKI73249.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1846]
gi|408261448|gb|EKI82434.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1847]
gi|408264465|gb|EKI85263.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1848]
gi|408269695|gb|EKI89934.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1849]
gi|408279698|gb|EKI99298.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1850]
gi|408281477|gb|EKJ00890.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1856]
gi|408294446|gb|EKJ12838.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1862]
gi|408296007|gb|EKJ14283.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1864]
gi|408299968|gb|EKJ17722.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1865]
gi|408312342|gb|EKJ29187.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1868]
gi|408312492|gb|EKJ29322.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1866]
gi|408326430|gb|EKJ42238.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1869]
gi|408329985|gb|EKJ45369.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE098]
gi|408330669|gb|EKJ45931.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli EC1870]
gi|408345740|gb|EKJ60052.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 0.1288]
gi|408350127|gb|EKJ64029.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 0.1304]
gi|408458126|gb|EKJ81915.1| transcriptional regulator CysB [Escherichia coli AD30]
gi|408553784|gb|EKK30855.1| HTH-type transcriptional regulator CysB [Escherichia coli 5.2239]
gi|408554655|gb|EKK31582.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 6.0172]
gi|408554769|gb|EKK31691.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.4870]
gi|408576874|gb|EKK52458.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.0586]
gi|408584131|gb|EKK59167.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.2524]
gi|408584210|gb|EKK59245.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 10.0833]
gi|408596978|gb|EKK71072.1| HTH-type transcriptional regulator CysB [Escherichia coli 10.0869]
gi|408600849|gb|EKK74671.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.0221]
gi|408603117|gb|EKK76779.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 8.0416]
gi|408615086|gb|EKK88321.1| HTH-type transcriptional regulator CysB [Escherichia coli 10.0821]
gi|412962597|emb|CCK46512.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli chi7122]
gi|412969176|emb|CCJ43806.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli]
gi|421936551|gb|EKT94213.1| transcriptional regulator CysB [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421939364|gb|EKT96892.1| transcriptional regulator CysB [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421942176|gb|EKT99531.1| transcriptional regulator CysB [Escherichia coli O111:H8 str.
CFSAN001632]
gi|427210176|gb|EKV80116.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.1042]
gi|427211598|gb|EKV81339.1| HTH-type transcriptional regulator CysB [Escherichia coli 89.0511]
gi|427211984|gb|EKV81641.1| HTH-type transcriptional regulator CysB [Escherichia coli 88.1467]
gi|427229115|gb|EKV97476.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.2281]
gi|427229325|gb|EKV97661.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.0091]
gi|427230571|gb|EKV98736.1| HTH-type transcriptional regulator CysB [Escherichia coli 90.0039]
gi|427246641|gb|EKW13840.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0056]
gi|427247892|gb|EKW14938.1| HTH-type transcriptional regulator CysB [Escherichia coli 93.0055]
gi|427249071|gb|EKW15951.1| HTH-type transcriptional regulator CysB [Escherichia coli 94.0618]
gi|427265676|gb|EKW31217.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0943]
gi|427266118|gb|EKW31606.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0183]
gi|427267915|gb|EKW33115.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.1288]
gi|427281024|gb|EKW45359.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0428]
gi|427284969|gb|EKW48974.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0427]
gi|427286829|gb|EKW50652.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0939]
gi|427297436|gb|EKW60471.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0932]
gi|427302718|gb|EKW65497.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0003]
gi|427303917|gb|EKW66612.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0107]
gi|427317491|gb|EKW79393.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.1742]
gi|427318971|gb|EKW80808.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0007]
gi|427324744|gb|EKW86207.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0672]
gi|427331257|gb|EKW92490.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 99.0678]
gi|427331491|gb|EKW92717.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0713]
gi|429256570|gb|EKY40737.1| HTH-type transcriptional regulator CysB [Escherichia coli 96.0109]
gi|429258157|gb|EKY42065.1| HTH-type transcriptional regulator CysB [Escherichia coli 97.0010]
gi|429349021|gb|EKY85776.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02030]
gi|429358093|gb|EKY94763.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02033-1]
gi|429359497|gb|EKY96162.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02092]
gi|429369241|gb|EKZ05822.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02093]
gi|429371951|gb|EKZ08501.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02281]
gi|429373901|gb|EKZ10441.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02318]
gi|429379626|gb|EKZ16125.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-02913]
gi|429384006|gb|EKZ20463.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-03439]
gi|429389295|gb|EKZ25716.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-03943]
gi|429395282|gb|EKZ31649.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9990]
gi|429400527|gb|EKZ36842.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. 11-04080]
gi|429405619|gb|EKZ41884.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9450]
gi|429416142|gb|EKZ52299.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4987]
gi|429416690|gb|EKZ52842.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417314|gb|EKZ53464.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4986]
gi|429422068|gb|EKZ58189.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-4988]
gi|429425880|gb|EKZ61969.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-5603]
gi|429438896|gb|EKZ74888.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-5604]
gi|429441714|gb|EKZ77682.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-6006]
gi|429448689|gb|EKZ84598.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec12-0466]
gi|429450577|gb|EKZ86471.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec12-0465]
gi|429453280|gb|EKZ89148.1| HTH-type transcriptional regulator CysB [Escherichia coli O104:H4
str. Ec11-9941]
gi|430876725|gb|ELC00232.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE2]
gi|430878466|gb|ELC01890.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE4]
gi|430886843|gb|ELC09671.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE10]
gi|430887631|gb|ELC10372.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE5]
gi|430899689|gb|ELC21782.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE12]
gi|430908125|gb|ELC29618.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE16]
gi|430909766|gb|ELC31131.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE15]
gi|430916655|gb|ELC37715.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE25]
gi|430920448|gb|ELC41335.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE21]
gi|430926388|gb|ELC46975.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE26]
gi|430931418|gb|ELC51870.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE28]
gi|430936030|gb|ELC56324.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE39]
gi|430940994|gb|ELC61153.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE44]
gi|430945802|gb|ELC65868.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE178]
gi|430954546|gb|ELC73416.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE187]
gi|430957157|gb|ELC75811.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE181]
gi|430963478|gb|ELC81063.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE188]
gi|430967728|gb|ELC85075.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE189]
gi|430971886|gb|ELC88885.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE193]
gi|430974441|gb|ELC91374.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE191]
gi|430983824|gb|ELD00480.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE201]
gi|430989942|gb|ELD06388.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE204]
gi|430994646|gb|ELD10968.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE205]
gi|430999021|gb|ELD15219.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE206]
gi|431008551|gb|ELD23351.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE210]
gi|431017101|gb|ELD30617.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE212]
gi|431022068|gb|ELD35338.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE213]
gi|431025415|gb|ELD38519.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE214]
gi|431030450|gb|ELD43464.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE216]
gi|431040915|gb|ELD51449.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE220]
gi|431043420|gb|ELD53752.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE224]
gi|431052668|gb|ELD62316.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE228]
gi|431053614|gb|ELD63219.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE230]
gi|431055795|gb|ELD65333.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE233]
gi|431062140|gb|ELD71418.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE234]
gi|431071017|gb|ELD79173.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE235]
gi|431075465|gb|ELD82985.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE236]
gi|431082953|gb|ELD89264.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE237]
gi|431086073|gb|ELD92177.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE47]
gi|431092480|gb|ELD98176.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE49]
gi|431095981|gb|ELE01576.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE51]
gi|431101506|gb|ELE06422.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE53]
gi|431106807|gb|ELE10996.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE56]
gi|431109399|gb|ELE13357.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE55]
gi|431117160|gb|ELE20423.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE57]
gi|431121367|gb|ELE24262.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE58]
gi|431131297|gb|ELE33376.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE60]
gi|431131489|gb|ELE33509.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE62]
gi|431139534|gb|ELE41330.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE67]
gi|431142718|gb|ELE44466.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE66]
gi|431149757|gb|ELE50822.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE72]
gi|431160651|gb|ELE61153.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE76]
gi|431164796|gb|ELE65187.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE77]
gi|431171410|gb|ELE71585.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE80]
gi|431172723|gb|ELE72827.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE81]
gi|431181901|gb|ELE81762.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE86]
gi|431182842|gb|ELE82658.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE83]
gi|431192493|gb|ELE91843.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE87]
gi|431193164|gb|ELE92501.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE93]
gi|431201177|gb|ELE99894.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE111]
gi|431202479|gb|ELF01165.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE116]
gi|431212088|gb|ELF10037.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE119]
gi|431216252|gb|ELF13891.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE142]
gi|431223304|gb|ELF20556.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE156]
gi|431228048|gb|ELF25171.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE161]
gi|431235503|gb|ELF30754.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE162]
gi|431245053|gb|ELF39350.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE171]
gi|431245298|gb|ELF39592.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE169]
gi|431250876|gb|ELF44935.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE6]
gi|431258105|gb|ELF50891.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE8]
gi|431264769|gb|ELF56472.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE9]
gi|431266771|gb|ELF58306.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE17]
gi|431275180|gb|ELF66225.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE18]
gi|431277138|gb|ELF68153.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE45]
gi|431285670|gb|ELF76506.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE23]
gi|431292901|gb|ELF83283.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE43]
gi|431298275|gb|ELF87908.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE29]
gi|431304119|gb|ELF92653.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE22]
gi|431310473|gb|ELF98665.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE46]
gi|431311704|gb|ELF99852.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE48]
gi|431316776|gb|ELG04575.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE50]
gi|431319779|gb|ELG07449.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE54]
gi|431327645|gb|ELG14966.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE59]
gi|431330619|gb|ELG17886.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE63]
gi|431338832|gb|ELG25903.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE65]
gi|431340460|gb|ELG27488.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE78]
gi|431344638|gb|ELG31576.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE79]
gi|431349671|gb|ELG36500.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE84]
gi|431355736|gb|ELG42431.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE91]
gi|431363780|gb|ELG50326.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE101]
gi|431365843|gb|ELG52347.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE115]
gi|431369762|gb|ELG55983.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE118]
gi|431373902|gb|ELG59505.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE123]
gi|431377937|gb|ELG62929.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE135]
gi|431386156|gb|ELG70113.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE136]
gi|431390395|gb|ELG74098.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE140]
gi|431395992|gb|ELG79480.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE141]
gi|431401177|gb|ELG84529.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE144]
gi|431403164|gb|ELG86446.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE147]
gi|431407088|gb|ELG90307.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE146]
gi|431412150|gb|ELG95235.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE154]
gi|431417939|gb|ELH00367.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE158]
gi|431423416|gb|ELH05543.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE165]
gi|431434014|gb|ELH15667.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE194]
gi|431442272|gb|ELH23377.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE190]
gi|431445740|gb|ELH26663.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE173]
gi|431447018|gb|ELH27761.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE175]
gi|431454330|gb|ELH34707.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE184]
gi|431459850|gb|ELH40140.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE196]
gi|431465273|gb|ELH45384.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE183]
gi|431469089|gb|ELH49021.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE197]
gi|431473363|gb|ELH53197.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE203]
gi|431476667|gb|ELH56455.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE202]
gi|431481488|gb|ELH61202.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE209]
gi|431484526|gb|ELH64206.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE207]
gi|431493694|gb|ELH73288.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE211]
gi|431497267|gb|ELH76845.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE217]
gi|431502538|gb|ELH81429.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE215]
gi|431509246|gb|ELH87517.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE218]
gi|431511929|gb|ELH90058.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE223]
gi|431515815|gb|ELH93630.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE227]
gi|431524560|gb|ELI01501.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE229]
gi|431533025|gb|ELI09528.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE104]
gi|431534876|gb|ELI11265.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE105]
gi|431538642|gb|ELI14626.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE106]
gi|431553034|gb|ELI26969.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE113]
gi|431557413|gb|ELI31124.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE112]
gi|431558391|gb|ELI32012.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE117]
gi|431569444|gb|ELI42387.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE120]
gi|431572752|gb|ELI45577.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE124]
gi|431573519|gb|ELI46317.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE122]
gi|431584978|gb|ELI56938.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE125]
gi|431587806|gb|ELI59157.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE128]
gi|431590684|gb|ELI61691.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE129]
gi|431598904|gb|ELI68690.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE131]
gi|431604143|gb|ELI73553.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE133]
gi|431607874|gb|ELI77228.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE137]
gi|431618140|gb|ELI87118.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE139]
gi|431621098|gb|ELI89918.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE145]
gi|431629725|gb|ELI98084.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE150]
gi|431631605|gb|ELI99911.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE148]
gi|431636040|gb|ELJ04208.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE153]
gi|431646245|gb|ELJ13744.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE157]
gi|431648078|gb|ELJ15478.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE160]
gi|431649672|gb|ELJ17017.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE163]
gi|431659824|gb|ELJ26713.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE166]
gi|431663156|gb|ELJ29919.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE167]
gi|431664106|gb|ELJ30847.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE168]
gi|431673558|gb|ELJ39779.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE174]
gi|431676406|gb|ELJ42525.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE176]
gi|431680285|gb|ELJ46142.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE177]
gi|431690321|gb|ELJ55804.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE179]
gi|431691005|gb|ELJ56467.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE180]
gi|431694821|gb|ELJ60165.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE232]
gi|431707447|gb|ELJ71981.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE88]
gi|431707743|gb|ELJ72275.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE82]
gi|431710003|gb|ELJ74438.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE85]
gi|431718752|gb|ELJ82822.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE90]
gi|431723850|gb|ELJ87794.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE94]
gi|431724170|gb|ELJ88110.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE95]
gi|431731605|gb|ELJ95105.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE97]
gi|431735411|gb|ELJ98770.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE99]
gi|432346899|gb|ELL41364.1| transcriptional regulator CysB [Escherichia coli J96]
gi|441606425|emb|CCP96957.1| Cys regulon transcriptional activator CysB [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441651558|emb|CCQ02834.1| Cys regulon transcriptional activator CysB [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441711160|emb|CCQ08430.1| Cys regulon transcriptional activator CysB [Escherichia coli Nissle
1917]
gi|443421871|gb|AGC86775.1| transcriptional regulator CysB [Escherichia coli APEC O78]
gi|444540722|gb|ELV20353.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0814]
gi|444544424|gb|ELV23479.1| HTH-type transcriptional regulator CysB [Escherichia coli
09BKT078844]
gi|444549668|gb|ELV27893.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0815]
gi|444560941|gb|ELV38074.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0839]
gi|444562866|gb|ELV39903.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0816]
gi|444567338|gb|ELV44103.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0848]
gi|444577485|gb|ELV53611.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1753]
gi|444581035|gb|ELV56913.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1775]
gi|444582954|gb|ELV58710.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1793]
gi|444596716|gb|ELV71763.1| HTH-type transcriptional regulator CysB [Escherichia coli PA11]
gi|444596820|gb|ELV71866.1| HTH-type transcriptional regulator CysB [Escherichia coli ATCC
700728]
gi|444600845|gb|ELV75663.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1805]
gi|444610401|gb|ELV84810.1| HTH-type transcriptional regulator CysB [Escherichia coli PA13]
gi|444610585|gb|ELV84992.1| HTH-type transcriptional regulator CysB [Escherichia coli PA19]
gi|444618415|gb|ELV92493.1| HTH-type transcriptional regulator CysB [Escherichia coli PA2]
gi|444628008|gb|ELW01753.1| HTH-type transcriptional regulator CysB [Escherichia coli PA47]
gi|444628506|gb|ELW02244.1| HTH-type transcriptional regulator CysB [Escherichia coli PA48]
gi|444633170|gb|ELW06710.1| HTH-type transcriptional regulator CysB [Escherichia coli PA8]
gi|444643170|gb|ELW16339.1| HTH-type transcriptional regulator CysB [Escherichia coli 7.1982]
gi|444645839|gb|ELW18888.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1781]
gi|444648599|gb|ELW21516.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.1762]
gi|444657950|gb|ELW30413.1| HTH-type transcriptional regulator CysB [Escherichia coli PA35]
gi|444663705|gb|ELW35914.1| HTH-type transcriptional regulator CysB [Escherichia coli 3.4880]
gi|444669755|gb|ELW41713.1| HTH-type transcriptional regulator CysB [Escherichia coli 95.0083]
gi|444672065|gb|ELW43823.1| HTH-type transcriptional regulator CysB [Escherichia coli 99.0670]
gi|449320377|gb|EMD10409.1| transcriptional regulator CysB [Escherichia coli O08]
gi|449322862|gb|EMD12840.1| transcriptional regulator CysB [Escherichia coli S17]
gi|449323234|gb|EMD13199.1| transcriptional regulator CysB [Escherichia coli SEPT362]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|254514287|ref|ZP_05126348.1| hypothetical protein NOR53_1971 [gamma proteobacterium NOR5-3]
gi|219676530|gb|EED32895.1| hypothetical protein NOR53_1971 [gamma proteobacterium NOR5-3]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 194/300 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ IL++ +++++E +K + +E+S G L+IATTHTQARY LP +I+ F ++P
Sbjct: 61 PAGQVILKTAGEVLRKVESIKHVAQEYSDEKRGALSIATTHTQARYVLPDVIRSFIAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI+EM + D AI TE L LI +PCY+W +IVP DH L
Sbjct: 121 DVSLHMNQGTPMQISEMAADGTVDFAIATEALELFSDLIMMPCYRWNRCVIVPKDHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L++++ +P++TY F+GR +LD F LTP +V ++D+IKTYV L +GI
Sbjct: 181 VSRLTLEDVAAHPIVTYVFGFTGRSRLDDAFVTAGLTPRVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + + D +L ++ A HLF ++++ + ++GT+LR Y+Y FI +P L R +
Sbjct: 241 GIVADMAHNEDIDDDLVALDARHLFASSVTSIGCRKGTFLRGYMYDFISDFAPHLTRDLV 300
>gi|432475420|ref|ZP_19717425.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE208]
gi|431007420|gb|ELD22232.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE208]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQIRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|425114704|ref|ZP_18516520.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 8.0566]
gi|425119420|ref|ZP_18521133.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.0569]
gi|408571090|gb|EKK47045.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli 8.0566]
gi|408571709|gb|EKK47637.1| HTH-type transcriptional regulator CysB [Escherichia coli 8.0569]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|49083660|gb|AAT51092.1| PA1754, partial [synthetic construct]
Length = 325
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIIHTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPNVISGFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYRWNRCVIVPHGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ P++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEQPIVTYVFGFTGRSKLDEAFSQRGLVPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + ASHLF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAHMAVDPKLDNDLVILDASHLFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRELL 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|22125951|ref|NP_669374.1| transcriptional regulator CysB [Yersinia pestis KIM10+]
gi|45441817|ref|NP_993356.1| transcriptional regulator CysB [Yersinia pestis biovar Microtus
str. 91001]
gi|51596467|ref|YP_070658.1| transcriptional regulator CysB [Yersinia pseudotuberculosis IP
32953]
gi|108807573|ref|YP_651489.1| transcriptional regulator CysB [Yersinia pestis Antiqua]
gi|108811849|ref|YP_647616.1| transcriptional regulator CysB [Yersinia pestis Nepal516]
gi|145598212|ref|YP_001162288.1| transcriptional regulator CysB [Yersinia pestis Pestoides F]
gi|149365861|ref|ZP_01887896.1| cys regulon transcriptional activator [Yersinia pestis CA88-4125]
gi|153948777|ref|YP_001400897.1| CysB family transcriptional regulator [Yersinia pseudotuberculosis
IP 31758]
gi|162418958|ref|YP_001606673.1| transcriptional regulator CysB [Yersinia pestis Angola]
gi|165927448|ref|ZP_02223280.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938196|ref|ZP_02226755.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010639|ref|ZP_02231537.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166210507|ref|ZP_02236542.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167400810|ref|ZP_02306316.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420305|ref|ZP_02312058.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424971|ref|ZP_02316724.1| cys regulon transcriptional activator [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467721|ref|ZP_02332425.1| cys regulon transcriptional activator [Yersinia pestis FV-1]
gi|170024267|ref|YP_001720772.1| transcriptional regulator CysB [Yersinia pseudotuberculosis YPIII]
gi|186895517|ref|YP_001872629.1| transcriptional regulator CysB [Yersinia pseudotuberculosis PB1/+]
gi|218929316|ref|YP_002347191.1| transcriptional regulator CysB [Yersinia pestis CO92]
gi|229894905|ref|ZP_04510083.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis Pestoides A]
gi|229897648|ref|ZP_04512804.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229898293|ref|ZP_04513440.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902152|ref|ZP_04517273.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis Nepal516]
gi|270490624|ref|ZP_06207698.1| cys regulon transcriptional activator CysB [Yersinia pestis KIM
D27]
gi|294503744|ref|YP_003567806.1| transcriptional regulator for cysteine regulon [Yersinia pestis
Z176003]
gi|384122540|ref|YP_005505160.1| transcriptional regulator for cysteine regulon [Yersinia pestis
D106004]
gi|384125803|ref|YP_005508417.1| transcriptional regulator for cysteine regulon [Yersinia pestis
D182038]
gi|384139952|ref|YP_005522654.1| transcriptional regulator CysB [Yersinia pestis A1122]
gi|384414382|ref|YP_005623744.1| LysR family transcriptional regulator [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420547134|ref|ZP_15045055.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-01]
gi|420552444|ref|ZP_15049796.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-02]
gi|420557972|ref|ZP_15054651.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-03]
gi|420563485|ref|ZP_15059536.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-04]
gi|420568513|ref|ZP_15064100.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-05]
gi|420574193|ref|ZP_15069247.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-06]
gi|420579507|ref|ZP_15074070.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-07]
gi|420584824|ref|ZP_15078891.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-08]
gi|420589945|ref|ZP_15083501.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-09]
gi|420595324|ref|ZP_15088341.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-10]
gi|420600989|ref|ZP_15093395.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-11]
gi|420606430|ref|ZP_15098286.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-12]
gi|420611844|ref|ZP_15103163.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-13]
gi|420617181|ref|ZP_15107847.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-14]
gi|420622501|ref|ZP_15112593.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-15]
gi|420627598|ref|ZP_15117214.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-16]
gi|420632688|ref|ZP_15121799.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-19]
gi|420637903|ref|ZP_15126475.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-25]
gi|420643412|ref|ZP_15131478.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-29]
gi|420648653|ref|ZP_15136240.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-32]
gi|420654293|ref|ZP_15141306.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-34]
gi|420659773|ref|ZP_15146236.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-36]
gi|420665123|ref|ZP_15151029.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-42]
gi|420670006|ref|ZP_15155466.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-45]
gi|420675337|ref|ZP_15160311.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-46]
gi|420680930|ref|ZP_15165377.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-47]
gi|420686219|ref|ZP_15170096.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-48]
gi|420691384|ref|ZP_15174654.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-52]
gi|420697199|ref|ZP_15179747.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-53]
gi|420702802|ref|ZP_15184367.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-54]
gi|420708468|ref|ZP_15189177.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-55]
gi|420713874|ref|ZP_15194011.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-56]
gi|420719342|ref|ZP_15198755.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-58]
gi|420724870|ref|ZP_15203562.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-59]
gi|420730459|ref|ZP_15208564.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-60]
gi|420735497|ref|ZP_15213125.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-61]
gi|420740978|ref|ZP_15218052.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-63]
gi|420746528|ref|ZP_15222826.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-64]
gi|420752118|ref|ZP_15227722.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-65]
gi|420757658|ref|ZP_15232325.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-66]
gi|420763207|ref|ZP_15237039.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-71]
gi|420768358|ref|ZP_15241672.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-72]
gi|420773395|ref|ZP_15246214.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-76]
gi|420778938|ref|ZP_15251118.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-88]
gi|420784519|ref|ZP_15256008.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-89]
gi|420789752|ref|ZP_15260669.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-90]
gi|420795253|ref|ZP_15265622.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-91]
gi|420800302|ref|ZP_15270158.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-92]
gi|420805696|ref|ZP_15275033.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-93]
gi|420811026|ref|ZP_15279839.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-94]
gi|420816576|ref|ZP_15284830.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-95]
gi|420821859|ref|ZP_15289590.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-96]
gi|420826948|ref|ZP_15294150.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-98]
gi|420832648|ref|ZP_15299302.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-99]
gi|420837511|ref|ZP_15303699.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-100]
gi|420842690|ref|ZP_15308392.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-101]
gi|420848337|ref|ZP_15313471.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-102]
gi|420853863|ref|ZP_15318233.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-103]
gi|420859201|ref|ZP_15322860.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-113]
gi|421763711|ref|ZP_16200504.1| transcriptional regulator CysB [Yersinia pestis INS]
gi|21958892|gb|AAM85625.1|AE013808_8 positive transcriptional regulator for cysteine regulon [Yersinia
pestis KIM10+]
gi|45436679|gb|AAS62233.1| cys regulon transcriptional activator [Yersinia pestis biovar
Microtus str. 91001]
gi|51589749|emb|CAH21379.1| cys regulon transcriptional activator [Yersinia pseudotuberculosis
IP 32953]
gi|108775497|gb|ABG18016.1| cys regulon transcriptional activator [Yersinia pestis Nepal516]
gi|108779486|gb|ABG13544.1| cys regulon transcriptional activator [Yersinia pestis Antiqua]
gi|115347927|emb|CAL20849.1| cys regulon transcriptional activator [Yersinia pestis CO92]
gi|145209908|gb|ABP39315.1| cys regulon transcriptional activator [Yersinia pestis Pestoides F]
gi|149292274|gb|EDM42348.1| cys regulon transcriptional activator [Yersinia pestis CA88-4125]
gi|152960272|gb|ABS47733.1| cys regulon transcriptional activator [Yersinia pseudotuberculosis
IP 31758]
gi|162351773|gb|ABX85721.1| cys regulon transcriptional activator [Yersinia pestis Angola]
gi|165913857|gb|EDR32475.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920714|gb|EDR37962.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990341|gb|EDR42642.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166207687|gb|EDR52167.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962000|gb|EDR58021.1| cys regulon transcriptional activator [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049663|gb|EDR61071.1| cys regulon transcriptional activator [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167056158|gb|EDR65936.1| cys regulon transcriptional activator [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169750801|gb|ACA68319.1| transcriptional regulator, LysR family [Yersinia pseudotuberculosis
YPIII]
gi|186698543|gb|ACC89172.1| transcriptional regulator, LysR family [Yersinia pseudotuberculosis
PB1/+]
gi|229681048|gb|EEO77143.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis Nepal516]
gi|229688583|gb|EEO80652.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693985|gb|EEO84034.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229702000|gb|EEO90021.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Yersinia pestis Pestoides A]
gi|262362136|gb|ACY58857.1| transcriptional regulator for cysteine regulon [Yersinia pestis
D106004]
gi|262365467|gb|ACY62024.1| transcriptional regulator for cysteine regulon [Yersinia pestis
D182038]
gi|270339128|gb|EFA49905.1| cys regulon transcriptional activator CysB [Yersinia pestis KIM
D27]
gi|294354203|gb|ADE64544.1| transcriptional regulator for cysteine regulon [Yersinia pestis
Z176003]
gi|320014886|gb|ADV98457.1| LysR family transcriptional regulator [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342855081|gb|AEL73634.1| transcriptional regulator CysB [Yersinia pestis A1122]
gi|391425801|gb|EIQ88037.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-01]
gi|391427367|gb|EIQ89457.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-02]
gi|391428398|gb|EIQ90382.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-03]
gi|391441116|gb|EIR01629.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-04]
gi|391442765|gb|EIR03138.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-05]
gi|391446286|gb|EIR06344.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-06]
gi|391458352|gb|EIR17224.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-07]
gi|391459247|gb|EIR18046.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-08]
gi|391461495|gb|EIR20100.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-09]
gi|391474344|gb|EIR31641.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-10]
gi|391475959|gb|EIR33116.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-11]
gi|391476721|gb|EIR33818.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-12]
gi|391490330|gb|EIR45994.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-13]
gi|391491381|gb|EIR46940.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-15]
gi|391493485|gb|EIR48836.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-14]
gi|391505841|gb|EIR59819.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-16]
gi|391506772|gb|EIR60667.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-19]
gi|391511166|gb|EIR64607.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-25]
gi|391521649|gb|EIR74104.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-29]
gi|391524017|gb|EIR76285.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-34]
gi|391525097|gb|EIR77263.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-32]
gi|391537196|gb|EIR88110.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-36]
gi|391539852|gb|EIR90541.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-42]
gi|391541822|gb|EIR92339.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-45]
gi|391555053|gb|EIS04250.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-46]
gi|391555476|gb|EIS04644.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-47]
gi|391556594|gb|EIS05665.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-48]
gi|391570246|gb|EIS17735.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-52]
gi|391570947|gb|EIS18362.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-53]
gi|391578434|gb|EIS24700.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-54]
gi|391583523|gb|EIS29173.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-55]
gi|391586552|gb|EIS31843.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-56]
gi|391598152|gb|EIS41911.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-58]
gi|391599676|gb|EIS43272.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-60]
gi|391601513|gb|EIS44934.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-59]
gi|391614290|gb|EIS56171.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-61]
gi|391614902|gb|EIS56730.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-63]
gi|391619563|gb|EIS60813.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-64]
gi|391626656|gb|EIS66973.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-65]
gi|391635158|gb|EIS74349.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-66]
gi|391637746|gb|EIS76630.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-71]
gi|391640211|gb|EIS78789.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-72]
gi|391649795|gb|EIS87148.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-76]
gi|391653975|gb|EIS90848.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-88]
gi|391658987|gb|EIS95339.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-89]
gi|391662725|gb|EIS98632.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-90]
gi|391670561|gb|EIT05586.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-91]
gi|391680206|gb|EIT14275.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-93]
gi|391681527|gb|EIT15478.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-92]
gi|391682256|gb|EIT16150.1| bacterial regulatory helix-turn-helix , lysR family protein
[Yersinia pestis PY-94]
gi|391694026|gb|EIT26727.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-95]
gi|391697290|gb|EIT29694.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-96]
gi|391698744|gb|EIT31009.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-98]
gi|391709149|gb|EIT40350.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-99]
gi|391714820|gb|EIT45447.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-100]
gi|391715397|gb|EIT45952.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-101]
gi|391726060|gb|EIT55456.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-102]
gi|391729521|gb|EIT58510.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-103]
gi|391734600|gb|EIT62851.1| HTH-type transcriptional regulator CysB [Yersinia pestis PY-113]
gi|411175809|gb|EKS45833.1| transcriptional regulator CysB [Yersinia pestis INS]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|15596951|ref|NP_250445.1| transcriptional regulator CysB [Pseudomonas aeruginosa PAO1]
gi|107101185|ref|ZP_01365103.1| hypothetical protein PaerPA_01002217 [Pseudomonas aeruginosa PACS2]
gi|116049704|ref|YP_791491.1| transcriptional regulator CysB [Pseudomonas aeruginosa UCBPP-PA14]
gi|218892294|ref|YP_002441161.1| transcriptional regulator CysB [Pseudomonas aeruginosa LESB58]
gi|254234849|ref|ZP_04928172.1| transcriptional regulator CysB [Pseudomonas aeruginosa C3719]
gi|254240096|ref|ZP_04933418.1| transcriptional regulator CysB [Pseudomonas aeruginosa 2192]
gi|296389860|ref|ZP_06879335.1| transcriptional regulator CysB [Pseudomonas aeruginosa PAb1]
gi|313110443|ref|ZP_07796328.1| transcriptional regulator CysB [Pseudomonas aeruginosa 39016]
gi|355644164|ref|ZP_09053669.1| HTH-type transcriptional regulator cysB [Pseudomonas sp. 2_1_26]
gi|386059355|ref|YP_005975877.1| transcriptional regulator CysB [Pseudomonas aeruginosa M18]
gi|386065593|ref|YP_005980897.1| transcriptional regulator [Pseudomonas aeruginosa NCGM2.S1]
gi|392984777|ref|YP_006483364.1| transcriptional regulator CysB [Pseudomonas aeruginosa DK2]
gi|416854215|ref|ZP_11910763.1| transcriptional regulator CysB [Pseudomonas aeruginosa 138244]
gi|416874333|ref|ZP_11918084.1| transcriptional regulator CysB [Pseudomonas aeruginosa 152504]
gi|418585532|ref|ZP_13149580.1| transcriptional regulator CysB [Pseudomonas aeruginosa MPAO1/P1]
gi|418591286|ref|ZP_13155185.1| transcriptional regulator CysB [Pseudomonas aeruginosa MPAO1/P2]
gi|419755383|ref|ZP_14281738.1| transcriptional regulator CysB [Pseudomonas aeruginosa PADK2_CF510]
gi|420140272|ref|ZP_14648043.1| transcriptional regulator CysB [Pseudomonas aeruginosa CIG1]
gi|421154556|ref|ZP_15614061.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 14886]
gi|421161311|ref|ZP_15620271.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 25324]
gi|421168609|ref|ZP_15626683.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 700888]
gi|421175153|ref|ZP_15632846.1| transcriptional regulator CysB [Pseudomonas aeruginosa CI27]
gi|421181150|ref|ZP_15638667.1| transcriptional regulator CysB [Pseudomonas aeruginosa E2]
gi|421516392|ref|ZP_15963078.1| transcriptional regulator CysB [Pseudomonas aeruginosa PAO579]
gi|424940975|ref|ZP_18356738.1| transcriptional regulator CysB [Pseudomonas aeruginosa NCMG1179]
gi|451982815|ref|ZP_21931117.1| Cys regulon transcriptional activator CysB [Pseudomonas aeruginosa
18A]
gi|9947732|gb|AAG05143.1|AE004601_8 transcriptional regulator CysB [Pseudomonas aeruginosa PAO1]
gi|2072311|gb|AAB53742.1| CysB [Pseudomonas aeruginosa]
gi|115584925|gb|ABJ10940.1| transcriptional regulator CysB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166780|gb|EAZ52291.1| transcriptional regulator CysB [Pseudomonas aeruginosa C3719]
gi|126193474|gb|EAZ57537.1| transcriptional regulator CysB [Pseudomonas aeruginosa 2192]
gi|218772520|emb|CAW28302.1| transcriptional regulator CysB [Pseudomonas aeruginosa LESB58]
gi|310882830|gb|EFQ41424.1| transcriptional regulator CysB [Pseudomonas aeruginosa 39016]
gi|334843540|gb|EGM22128.1| transcriptional regulator CysB [Pseudomonas aeruginosa 152504]
gi|334844354|gb|EGM22930.1| transcriptional regulator CysB [Pseudomonas aeruginosa 138244]
gi|346057421|dbj|GAA17304.1| transcriptional regulator CysB [Pseudomonas aeruginosa NCMG1179]
gi|347305661|gb|AEO75775.1| transcriptional regulator CysB [Pseudomonas aeruginosa M18]
gi|348034152|dbj|BAK89512.1| transcriptional regulator [Pseudomonas aeruginosa NCGM2.S1]
gi|354829331|gb|EHF13407.1| HTH-type transcriptional regulator cysB [Pseudomonas sp. 2_1_26]
gi|375044221|gb|EHS36830.1| transcriptional regulator CysB [Pseudomonas aeruginosa MPAO1/P1]
gi|375049826|gb|EHS42314.1| transcriptional regulator CysB [Pseudomonas aeruginosa MPAO1/P2]
gi|384398080|gb|EIE44488.1| transcriptional regulator CysB [Pseudomonas aeruginosa PADK2_CF510]
gi|392320282|gb|AFM65662.1| transcriptional regulator CysB [Pseudomonas aeruginosa DK2]
gi|403247011|gb|EJY60696.1| transcriptional regulator CysB [Pseudomonas aeruginosa CIG1]
gi|404350120|gb|EJZ76457.1| transcriptional regulator CysB [Pseudomonas aeruginosa PAO579]
gi|404521957|gb|EKA32511.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 14886]
gi|404529078|gb|EKA39130.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 700888]
gi|404532781|gb|EKA42647.1| transcriptional regulator CysB [Pseudomonas aeruginosa CI27]
gi|404540258|gb|EKA49672.1| transcriptional regulator CysB [Pseudomonas aeruginosa ATCC 25324]
gi|404544227|gb|EKA53422.1| transcriptional regulator CysB [Pseudomonas aeruginosa E2]
gi|451759592|emb|CCQ83640.1| Cys regulon transcriptional activator CysB [Pseudomonas aeruginosa
18A]
gi|453047114|gb|EME94829.1| transcriptional regulator CysB [Pseudomonas aeruginosa PA21_ST175]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIIHTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPNVISGFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYRWNRCVIVPHGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ P++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEQPIVTYVFGFTGRSKLDEAFSQRGLVPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + ASHLF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAHMAVDPKLDNDLVILDASHLFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRELL 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|238757078|ref|ZP_04618266.1| HTH-type transcriptional regulator cysB [Yersinia aldovae ATCC
35236]
gi|238704908|gb|EEP97437.1| HTH-type transcriptional regulator cysB [Yersinia aldovae ATCC
35236]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|419956880|ref|ZP_14472946.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
GS1]
gi|388607038|gb|EIM36242.1| transcriptional regulator CysB [Enterobacter cloacae subsp. cloacae
GS1]
Length = 324
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KGEVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|416278590|ref|ZP_11644644.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Shigella boydii ATCC 9905]
gi|320182650|gb|EFW57538.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Shigella boydii ATCC 9905]
Length = 316
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D FS + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFSRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|117624176|ref|YP_853089.1| transcriptional regulator Cbl [Escherichia coli APEC O1]
gi|92110335|emb|CAJ87603.1| putative transcriptional regulator [Escherichia coli]
gi|115513300|gb|ABJ01375.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli APEC O1]
Length = 316
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ S++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITSLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|271500641|ref|YP_003333666.1| LysR family transcriptional regulator [Dickeya dadantii Ech586]
gi|270344196|gb|ACZ76961.1| transcriptional regulator, LysR family [Dickeya dadantii Ech586]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPDVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPMQIAEAVAKGTADFAIATEALHLYEDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSQISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D +L +I+A +LF + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIANMAVTPTSDPDLVAINADNLFSYSTTKIGFRRSTFLRSYMYDFIHRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|238790405|ref|ZP_04634176.1| HTH-type transcriptional regulator cysB [Yersinia frederiksenii
ATCC 33641]
gi|238721512|gb|EEQ13181.1| HTH-type transcriptional regulator cysB [Yersinia frederiksenii
ATCC 33641]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|77360105|ref|YP_339680.1| transcriptional regulator CysB [Pseudoalteromonas haloplanktis
TAC125]
gi|76875016|emb|CAI86237.1| Cys regulon transcriptional activator (LysR family)
[Pseudoalteromonas haloplanktis TAC125]
Length = 325
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 192/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++EG+K + E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 SAGEEVINISREILSKVEGIKAVAHEHTLPDQGKLNIATTHTQARYALPNVIKGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
NSI++ +I+ YPLITY F+GR +LD+ FS L P+IV ++D+IKTYV L +G
Sbjct: 181 KANSITVADIAKYPLITYVFGFTGRSELDKAFSAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVSDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|238798374|ref|ZP_04641856.1| HTH-type transcriptional regulator cysB [Yersinia mollaretii ATCC
43969]
gi|238717759|gb|EEQ09593.1| HTH-type transcriptional regulator cysB [Yersinia mollaretii ATCC
43969]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|86148757|ref|ZP_01067029.1| transcriptional regulator for cysteine regulon [Vibrio sp. MED222]
gi|218710030|ref|YP_002417651.1| transcriptional regulator CysB [Vibrio splendidus LGP32]
gi|85833454|gb|EAQ51640.1| transcriptional regulator for cysteine regulon [Vibrio sp. MED222]
gi|218323049|emb|CAV19226.1| HTH-type transcriptional regulator cysB [Vibrio splendidus LGP32]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 QAGEDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+IS+++++ Y L+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KRNISIEDLAAYSLVTYVFGFTGRSELDTAFNKVGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASHLFG + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAIDHEQDTDLVAIDASHLFGASTTSIGFRKGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|123442458|ref|YP_001006437.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238785805|ref|ZP_04629776.1| HTH-type transcriptional regulator cysB [Yersinia bercovieri ATCC
43970]
gi|122089419|emb|CAL12267.1| cys regulon transcriptional activator [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238713297|gb|EEQ05338.1| HTH-type transcriptional regulator cysB [Yersinia bercovieri ATCC
43970]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|354597527|ref|ZP_09015544.1| transcriptional regulator, LysR family [Brenneria sp. EniD312]
gi|353675462|gb|EHD21495.1| transcriptional regulator, LysR family [Brenneria sp. EniD312]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 193/301 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEVIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPAVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVAKGTADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTDITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D + +L +I+A+ +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIANMAVDPQIETDLVTINANGIFSYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|343510924|ref|ZP_08748115.1| transcriptional regulator CysB [Vibrio scophthalmi LMG 19158]
gi|343517327|ref|ZP_08754333.1| transcriptional regulator CysB [Vibrio sp. N418]
gi|342793651|gb|EGU29441.1| transcriptional regulator CysB [Vibrio sp. N418]
gi|342799870|gb|EGU35420.1| transcriptional regulator CysB [Vibrio scophthalmi LMG 19158]
Length = 324
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLFTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 TAGEDIVRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DH L
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + MG+
Sbjct: 181 KAKVTIEDLASYPLVTYVFGFTGRSELDTAFNKVGLTPKVVFTATDADVIKTYVRMGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F+ +P L R +
Sbjct: 241 GVIASMAIDKEQDHDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMVRFAPHLTRPVV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EQALS 305
>gi|410621939|ref|ZP_11332778.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410158337|dbj|GAC28152.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 324
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 196/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+AL+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAEALFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +K + +E++ D G L IATTHTQARYALP +IK F ++
Sbjct: 61 DAGKDVINISREILAKVESIKAVAREYTLPDQGKLNIATTHTQARYALPDVIKGFMAKYA 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLVMLPCYHWNRSVIVNKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ YPL+TY F+GR +LD F++ L P IV ++D+IKTYV L +GI
Sbjct: 181 KTSITIQDIAKYPLVTYVFGFTGRSELDHAFNVAGLEPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A + D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L + +
Sbjct: 241 GVIASMAVSDDLDSDLVKIDASHLFEYSTTKIGFRKGSFLRNYMYEFIERFAPHLTKDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAM 304
>gi|258621348|ref|ZP_05716382.1| transcriptional regulator for cysteine regulon [Vibrio mimicus
VM573]
gi|449144406|ref|ZP_21775221.1| Regulatory protein CysB [Vibrio mimicus CAIM 602]
gi|258586736|gb|EEW11451.1| transcriptional regulator for cysteine regulon [Vibrio mimicus
VM573]
gi|449079907|gb|EMB50826.1| Regulatory protein CysB [Vibrio mimicus CAIM 602]
Length = 324
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ +TP +V ++D+IKTYV + +G+
Sbjct: 181 KERVTIEDLASYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|71737901|ref|YP_274267.1| transcriptional regulator CysB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257486291|ref|ZP_05640332.1| transcriptional regulator CysB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|289627205|ref|ZP_06460159.1| transcriptional regulator CysB [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289650199|ref|ZP_06481542.1| transcriptional regulator CysB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|416015924|ref|ZP_11563390.1| transcriptional regulator CysB [Pseudomonas syringae pv. glycinea
str. B076]
gi|416026550|ref|ZP_11569954.1| transcriptional regulator CysB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422582763|ref|ZP_16657895.1| transcriptional regulator CysB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598141|ref|ZP_16672406.1| transcriptional regulator CysB [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|422604573|ref|ZP_16676589.1| transcriptional regulator CysB [Pseudomonas syringae pv. mori str.
301020]
gi|71558454|gb|AAZ37665.1| transcriptional regulator CysB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298158891|gb|EFH99952.1| LysR family HTH transcriptional regulator [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|320324954|gb|EFW81026.1| transcriptional regulator CysB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320329108|gb|EFW85106.1| transcriptional regulator CysB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330867602|gb|EGH02311.1| transcriptional regulator CysB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330888231|gb|EGH20892.1| transcriptional regulator CysB [Pseudomonas syringae pv. mori str.
301020]
gi|330988423|gb|EGH86526.1| transcriptional regulator CysB [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 324
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 VPKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDEEVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|406596854|ref|YP_006747984.1| transcriptional regulator CysB [Alteromonas macleodii ATCC 27126]
gi|407683845|ref|YP_006799019.1| transcriptional regulator CysB [Alteromonas macleodii str. 'English
Channel 673']
gi|407687768|ref|YP_006802941.1| transcriptional regulator CysB [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407700094|ref|YP_006824881.1| transcriptional regulator CysB [Alteromonas macleodii str. 'Black
Sea 11']
gi|406374175|gb|AFS37430.1| transcriptional regulator CysB [Alteromonas macleodii ATCC 27126]
gi|407245456|gb|AFT74642.1| transcriptional regulator CysB [Alteromonas macleodii str. 'English
Channel 673']
gi|407249241|gb|AFT78426.1| transcriptional regulator CysB [Alteromonas macleodii str. 'Black
Sea 11']
gi|407291148|gb|AFT95460.1| transcriptional regulator CysB [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +K + +E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 DAGNDVINIAREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIQGFMSKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSVIVNKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I + +I+ YPL+TY F+GR +LD+ F LTP IV ++D+IKTYV L +GI
Sbjct: 181 KGTIDISDIAKYPLVTYVFGFTGRSELDQAFERAGLTPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVSEELDDDLVKIDASHLFDYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKDKV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|433091667|ref|ZP_20277953.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE138]
gi|431612283|gb|ELI81531.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE138]
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLSG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|374335948|ref|YP_005092635.1| transcriptional regulator CysB [Oceanimonas sp. GK1]
gi|372985635|gb|AEY01885.1| transcriptional regulator CysB [Oceanimonas sp. GK1]
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N++ A++LYTSQPG+SK + LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVANHNLNVSATAESLYTSQPGISKQVRMLEDELGIQVFERSGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ ++E +K + + + D G+L I+TTHTQARYALP++IK F ++P
Sbjct: 61 PAGRDIIRIAGEILGKVESIKAVASQHTHPDQGSLNISTTHTQARYALPEVIKGFIQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E + +D AI TE + LI +PCY W I+VP DHPL
Sbjct: 121 KVSLHMHQGTPVQISESVAKGSSDFAIATEAMHLFQDLIMLPCYHWNRCILVPKDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ S+ +I+ +PL+TY F+GR +LD F+ P +V ++D+IKTYV L +GI
Sbjct: 181 VTRPSIADIAGFPLVTYVFGFTGRSQLDVAFNRAGYEPRVVFTATDADVIKTYVRLGIGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A D D +L +I A HLF + +++ ++GT+LRSY+Y F++ +P L R+ +
Sbjct: 241 GVLASMAVDPKEDSDLVAIDAGHLFAPSTTKIGFRKGTFLRSYMYDFMERFAPHLTRERV 300
Query: 301 NKILN 305
+K +
Sbjct: 301 DKAIT 305
>gi|24112672|ref|NP_707182.1| transcriptional regulator CysB [Shigella flexneri 2a str. 301]
gi|30062797|ref|NP_836968.1| transcriptional regulator CysB [Shigella flexneri 2a str. 2457T]
gi|110805276|ref|YP_688796.1| transcriptional regulator CysB [Shigella flexneri 5 str. 8401]
gi|384542911|ref|YP_005726973.1| Positive transcriptional regulator for cysteine regulon [Shigella
flexneri 2002017]
gi|415856091|ref|ZP_11531143.1| HTH-type transcriptional regulator cysB [Shigella flexneri 2a str.
2457T]
gi|417701654|ref|ZP_12350779.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-218]
gi|417707282|ref|ZP_12356330.1| HTH-type transcriptional regulator cysB [Shigella flexneri VA-6]
gi|417712152|ref|ZP_12361146.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-272]
gi|417716743|ref|ZP_12365669.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-227]
gi|417722606|ref|ZP_12371429.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-304]
gi|417733075|ref|ZP_12381738.1| HTH-type transcriptional regulator cysB [Shigella flexneri 2747-71]
gi|417738286|ref|ZP_12386879.1| HTH-type transcriptional regulator cysB [Shigella flexneri 4343-70]
gi|417742929|ref|ZP_12391471.1| cysB [Shigella flexneri 2930-71]
gi|420341295|ref|ZP_14842800.1| HTH-type transcriptional regulator CysB [Shigella flexneri K-404]
gi|424837717|ref|ZP_18262354.1| transcriptional regulator CysB [Shigella flexneri 5a str. M90T]
gi|24051587|gb|AAN42889.1| positive transcriptional regulator for cysteine regulon [Shigella
flexneri 2a str. 301]
gi|30041045|gb|AAP16775.1| positive transcriptional regulator for cysteine regulon [Shigella
flexneri 2a str. 2457T]
gi|110614824|gb|ABF03491.1| positive transcriptional regulator for cysteine regulon [Shigella
flexneri 5 str. 8401]
gi|281600696|gb|ADA73680.1| Positive transcriptional regulator for cysteine regulon [Shigella
flexneri 2002017]
gi|313649463|gb|EFS13894.1| HTH-type transcriptional regulator cysB [Shigella flexneri 2a str.
2457T]
gi|332757928|gb|EGJ88255.1| HTH-type transcriptional regulator cysB [Shigella flexneri 4343-70]
gi|332759477|gb|EGJ89785.1| HTH-type transcriptional regulator cysB [Shigella flexneri 2747-71]
gi|332767509|gb|EGJ97703.1| cysB [Shigella flexneri 2930-71]
gi|333004589|gb|EGK24113.1| HTH-type transcriptional regulator cysB [Shigella flexneri VA-6]
gi|333005625|gb|EGK25143.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-218]
gi|333007611|gb|EGK27089.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-272]
gi|333019105|gb|EGK38395.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-304]
gi|333019546|gb|EGK38826.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-227]
gi|383466769|gb|EID61790.1| transcriptional regulator CysB [Shigella flexneri 5a str. M90T]
gi|391270774|gb|EIQ29661.1| HTH-type transcriptional regulator CysB [Shigella flexneri K-404]
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGPPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|258626455|ref|ZP_05721297.1| transcriptional regulator for cysteine regulon [Vibrio mimicus
VM603]
gi|262166013|ref|ZP_06033750.1| regulatory protein CysB [Vibrio mimicus VM223]
gi|262171128|ref|ZP_06038806.1| regulatory protein CysB [Vibrio mimicus MB-451]
gi|424807110|ref|ZP_18232518.1| transcriptional regulator CysB [Vibrio mimicus SX-4]
gi|258581260|gb|EEW06167.1| transcriptional regulator for cysteine regulon [Vibrio mimicus
VM603]
gi|261892204|gb|EEY38190.1| regulatory protein CysB [Vibrio mimicus MB-451]
gi|262025729|gb|EEY44397.1| regulatory protein CysB [Vibrio mimicus VM223]
gi|342325052|gb|EGU20832.1| transcriptional regulator CysB [Vibrio mimicus SX-4]
Length = 336
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 13 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 72
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 73 PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 132
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 133 KVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 192
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ +TP +V ++D+IKTYV + +G+
Sbjct: 193 KERVTIEDLASYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 252
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 253 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 312
Query: 301 NKILN 305
+ ++
Sbjct: 313 EQAIS 317
>gi|85059387|ref|YP_455089.1| transcriptional regulator CysB [Sodalis glossinidius str.
'morsitans']
gi|84779907|dbj|BAE74684.1| cysteine regulon transcriptional activator [Sodalis glossinidius
str. 'morsitans']
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFARSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQA YALP++IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDRGSLYVATTHTQACYALPEVIKGFITRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLVMLPCYDWNRAVVVLPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ +PL+TY F+GR +LD F+ LTP IV ++D+IKTYV + +G+
Sbjct: 181 KTSLSIEELAVFPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRMGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A +S D +L I+A LF + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIANMAVNSEADPDLVKINADDLFAQSTTKIGFRRSTFLRSYMYDFIHRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|261210549|ref|ZP_05924842.1| regulatory protein CysB [Vibrio sp. RC341]
gi|260840334|gb|EEX66905.1| regulatory protein CysB [Vibrio sp. RC341]
Length = 336
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 13 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 72
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 73 PAGEHIVRIATEILSRVESIKAVASEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 132
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 133 KVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 192
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++ YPL+TY F+GR +LD F+ +TP +V ++D+IKTYV + +G+
Sbjct: 193 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 252
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 253 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 312
Query: 301 NKILN 305
+ ++
Sbjct: 313 EQAIS 317
>gi|410861748|ref|YP_006976982.1| transcriptional regulator CysB [Alteromonas macleodii AltDE1]
gi|410819010|gb|AFV85627.1| transcriptional regulator CysB [Alteromonas macleodii AltDE1]
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +K + +E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 DAGNDVINIAREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIQGFMSKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSVIVNKDHPLSK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I + +I+ YPL+TY F+GR +LD+ F LTP IV ++D+IKTYV L +GI
Sbjct: 181 KGTIDISDIAKYPLVTYVFGFTGRSELDQAFERAGLTPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVSEELDDDLVKIDASHLFDYSTTKIGFRKGSFLRSYMYDFIERFAPHLTKDKV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|332161867|ref|YP_004298444.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386308506|ref|YP_006004562.1| regulatory protein CysB [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418243476|ref|ZP_12869953.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549476|ref|ZP_20505520.1| Cys regulon transcriptional activator CysB [Yersinia enterocolitica
IP 10393]
gi|318605620|emb|CBY27118.1| regulatory protein CysB [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325666097|gb|ADZ42741.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863899|emb|CBX73988.1| HTH-type transcriptional regulator cysB [Yersinia enterocolitica
W22703]
gi|351777057|gb|EHB19307.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788611|emb|CCO68560.1| Cys regulon transcriptional activator CysB [Yersinia enterocolitica
IP 10393]
Length = 324
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|300935372|ref|ZP_07150371.1| cys regulon transcriptional activator CysB [Escherichia coli MS
21-1]
gi|432679836|ref|ZP_19915221.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE143]
gi|300459402|gb|EFK22895.1| cys regulon transcriptional activator CysB [Escherichia coli MS
21-1]
gi|431222259|gb|ELF19541.1| HTH-type transcriptional regulator CysB [Escherichia coli KTE143]
Length = 324
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F +P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIECYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|62180280|ref|YP_216697.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|375114608|ref|ZP_09759778.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62127913|gb|AAX65616.1| transcriptional regulator for cysteine regulon (LysR familiy)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322714754|gb|EFZ06325.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYAL +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALLGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|88859943|ref|ZP_01134582.1| transcriptional regulator for cysteine regulon [Pseudoalteromonas
tunicata D2]
gi|88817937|gb|EAR27753.1| transcriptional regulator for cysteine regulon [Pseudoalteromonas
tunicata D2]
Length = 325
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 195/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP++I+ F +FP
Sbjct: 61 PAGKDIIHISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPQVIQGFMKKFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P+QI++ AD AI TE L L+ +PCY W I+V +HPL
Sbjct: 121 KVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKNHPLAQ 180
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
N++++ +I+ YPLITY F+GR +LD+ F+ L P IV ++D+IKTYV L +G
Sbjct: 181 KANNLTIADIAKYPLITYVFGFTGRSELDKAFNKHGLEPQIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D++L I ASHLF + +++ ++GT+LR+Y+Y FI+ + L ++
Sbjct: 241 VGVVASMAIDKQADQDLVCIDASHLFDASTTKIGFRKGTFLRTYMYDFIERFASHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|157370896|ref|YP_001478885.1| transcriptional regulator CysB [Serratia proteamaculans 568]
gi|157322660|gb|ABV41757.1| transcriptional regulator, LysR family [Serratia proteamaculans
568]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|82776634|ref|YP_402983.1| transcriptional regulator CysB [Shigella dysenteriae Sd197]
gi|309789063|ref|ZP_07683658.1| HTH-type transcriptional regulator cysB [Shigella dysenteriae 1617]
gi|81240782|gb|ABB61492.1| positive transcriptional regulator for cysteine regulon [Shigella
dysenteriae Sd197]
gi|308923334|gb|EFP68846.1| HTH-type transcriptional regulator cysB [Shigella dysenteriae 1617]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+ ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIHIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL+
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLVG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|392542757|ref|ZP_10289894.1| transcriptional regulator CysB [Pseudoalteromonas piscicida JCM
20779]
gi|409201918|ref|ZP_11230121.1| transcriptional regulator CysB [Pseudoalteromonas flavipulchra JG1]
Length = 325
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 191/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 GAGNEIINIAREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPPVIQGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAQ 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
S +++++++ YPLITY F+GR +LD+ F+ L P+IV ++D+IKTYV L +G
Sbjct: 181 KGSALTVQDVAKYPLITYVFGFTGRSELDKAFNAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR Y+Y FI+ +P L +
Sbjct: 241 VGVLASMALDEKSDSDLVCIDASHLFEASTTKIGFRKGSFLRGYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|28869479|ref|NP_792098.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968107|ref|ZP_03396252.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
tomato T1]
gi|237803639|ref|ZP_04591224.1| transcriptional regulator CysB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|301384918|ref|ZP_07233336.1| transcriptional regulator CysB [Pseudomonas syringae pv. tomato
Max13]
gi|302061967|ref|ZP_07253508.1| transcriptional regulator CysB [Pseudomonas syringae pv. tomato
K40]
gi|302135219|ref|ZP_07261209.1| transcriptional regulator CysB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422588935|ref|ZP_16663600.1| transcriptional regulator CysB [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422645433|ref|ZP_16708569.1| transcriptional regulator CysB [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|422654333|ref|ZP_16717078.1| transcriptional regulator CysB [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|422657632|ref|ZP_16720072.1| transcriptional regulator CysB [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|28852721|gb|AAO55793.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927087|gb|EEB60637.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
tomato T1]
gi|330875577|gb|EGH09726.1| transcriptional regulator CysB [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330958983|gb|EGH59243.1| transcriptional regulator CysB [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330967361|gb|EGH67621.1| transcriptional regulator CysB [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|331016231|gb|EGH96287.1| transcriptional regulator CysB [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|331025621|gb|EGI05677.1| transcriptional regulator CysB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 VPKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDEEVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|336311808|ref|ZP_08566767.1| regulatory protein CysB [Shewanella sp. HN-41]
gi|335864690|gb|EGM69768.1| regulatory protein CysB [Shewanella sp. HN-41]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II++F ++P
Sbjct: 61 PAGLQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPHIIRQFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W ++VP DHPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSHISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D N DK+L +I A HLF + +++ ++G++LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAIDPNVDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFMQHFAPHLTRDVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|302186159|ref|ZP_07262832.1| transcriptional regulator CysB [Pseudomonas syringae pv. syringae
642]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W I+VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCIVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 APKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAIDETVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|417672697|ref|ZP_12322159.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae
155-74]
gi|332091609|gb|EGI96690.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae
155-74]
Length = 316
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|336452000|ref|ZP_08622433.1| transcriptional regulator [Idiomarina sp. A28L]
gi|336281047|gb|EGN74331.1| transcriptional regulator [Idiomarina sp. A28L]
Length = 324
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 198/304 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ALYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAEALYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +++ ++ +EG+K +++ D G L IATTHTQARYALPK+I+ F ++P
Sbjct: 61 AVGEEVIQIAREVLSRVEGIKAAASQYNRPDQGTLNIATTHTQARYALPKVIQGFIDKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P+QI+E +AD AI TE L LI +PCY+W I+VP +HPL
Sbjct: 121 DVSLHMHQGSPEQISEFAAKGKADFAIATEALHLYQDLIMLPCYRWNRSILVPPNHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+++I+ + L+TY F+GR +LD+ FS L P IV ++D+IKTYV + +GI
Sbjct: 181 KVDVSIQDIAEFSLVTYVHGFTGRSRLDQAFSEAGLVPKIVFTATDADVIKTYVRMGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A++ +D +L +I A HLF + +++ ++G ++RSY+Y FI+ +P L R I
Sbjct: 241 GVIATMAYEKEKDSDLVAIPADHLFAPSTTKIGFRKGVFIRSYMYDFIERFAPHLTRSVI 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DEAI 304
>gi|66045317|ref|YP_235158.1| transcriptional regulator CysB [Pseudomonas syringae pv. syringae
B728a]
gi|422676058|ref|ZP_16735394.1| transcriptional regulator CysB [Pseudomonas syringae pv. aceris
str. M302273]
gi|63256024|gb|AAY37120.1| regulatory protein, LysR:LysR, substrate-binding protein
[Pseudomonas syringae pv. syringae B728a]
gi|330973768|gb|EGH73834.1| transcriptional regulator CysB [Pseudomonas syringae pv. aceris
str. M302273]
Length = 324
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 APKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDEEVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|411010875|ref|ZP_11387204.1| transcriptional regulator CysB-like protein [Aeromonas aquariorum
AAK1]
gi|423199496|ref|ZP_17186079.1| hypothetical protein HMPREF1171_04111 [Aeromonas hydrophila SSU]
gi|404629057|gb|EKB25821.1| hypothetical protein HMPREF1171_04111 [Aeromonas hydrophila SSU]
Length = 315
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 200/295 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+++NLTE A AL+TSQ GVS+ I ELEEEL I++FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREAARRDYNLTEVANALFTSQSGVSRHIRELEEELGIELFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + E ++K+ F+ D+G L +ATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILGDAENIRKLASTFANRDSGRLLVATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 LVQLELRQGGPEEIVRLVQTGEVDIGISSEQLDKSEGVVAFPYYRWHHNIVVPEQHPLSA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ +P+ITY +GR ++D F+ + P I+L +SD+IKTYVEL MG+
Sbjct: 181 EQELTLAALAQWPIITYQAGLTGRARVDEAFAEAGIAPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +AFD+ RDK L + S LF + + +KQG + ++ + FI+L +P+L
Sbjct: 241 GILADMAFDTQRDKGLVQLDGSRLFAPHTAWIGLKQGQFQHNFAWQFIQLCNPEL 295
>gi|419955051|ref|ZP_14471184.1| transcriptional regulator CysB [Pseudomonas stutzeri TS44]
gi|387968234|gb|EIK52526.1| transcriptional regulator CysB [Pseudomonas stutzeri TS44]
Length = 324
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKRGTLSIATTHTQARYALPRVISTFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGSPTQIAEMAADGTVDFAIATEGLELFGDLIMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS L+P +V ++D+IKTYV L +G+
Sbjct: 181 LEKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHHGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D L + AS LF ++++++ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDARLDAVLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEQFAPHLDRTML 300
Query: 301 NKILN 305
+K ++
Sbjct: 301 DKAIH 305
>gi|359433630|ref|ZP_09223955.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20652]
gi|357919728|dbj|GAA60204.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20652]
Length = 325
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 193/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 GAGEDIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIQGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
NS+++ +I+ YPLITY F+GR +LD+ FS Q L P+IV ++D+IKTYV L +G
Sbjct: 181 KANSLTVADIAQYPLITYVFGFTGRSELDKAFSAQGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVSDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|392421190|ref|YP_006457794.1| transcriptional regulator CysB [Pseudomonas stutzeri CCUG 29243]
gi|452747887|ref|ZP_21947676.1| transcriptional regulator CysB [Pseudomonas stutzeri NF13]
gi|390983378|gb|AFM33371.1| transcriptional regulator CysB [Pseudomonas stutzeri CCUG 29243]
gi|452008036|gb|EME00280.1| transcriptional regulator CysB [Pseudomonas stutzeri NF13]
Length = 324
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPQVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD F + L+P +V ++D+IKTYV L +G+
Sbjct: 181 LEKLTLEALAEHPIVTYVFGFTGRSKLDEAFGHRGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A DS D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDSKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIQQFAPHLDRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 EKAIQ 305
>gi|410094045|ref|ZP_11290502.1| transcriptional regulator CysB [Pseudomonas viridiflava UASWS0038]
gi|409758537|gb|EKN43828.1| transcriptional regulator CysB [Pseudomonas viridiflava UASWS0038]
Length = 324
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIRQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPTQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 VPKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDEELDSDLVILDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIT 305
>gi|420319905|ref|ZP_14821747.1| HTH-type transcriptional regulator CysB [Shigella flexneri 2850-71]
gi|391252037|gb|EIQ11241.1| HTH-type transcriptional regulator CysB [Shigella flexneri 2850-71]
Length = 324
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGPPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP I+ ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIIFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|149911819|ref|ZP_01900422.1| Cys regulon transcriptional activator [Moritella sp. PE36]
gi|149805119|gb|EDM65142.1| Cys regulon transcriptional activator [Moritella sp. PE36]
Length = 324
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 195/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L QFR++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQFRYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ ++E +K + + + G L I+TTHTQARYALPK+IK F ++P
Sbjct: 61 PAGKDIIRIAADILGKVESIKAVASQHTHPSKGTLNISTTHTQARYALPKVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L++ QG P QI++ + AD AI TE L L+ +PCY W IIV HPL
Sbjct: 121 DVSLNMHQGTPAQISDSVSKGTADFAIATEALHLYSDLVMLPCYHWNRSIIVKPGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I++++I+ Y L+TY F+GR +LD F L P IV ++D+IKTYV+L +G+
Sbjct: 181 VGKITVEDIAKYSLVTYVFGFTGRSELDCAFDAAGLEPKIVFTATDADVIKTYVKLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++AFD D +L I ASHLF ++ +++ ++GT+LR+Y+Y F++ +P L R +
Sbjct: 241 GVLATMAFDDETDDDLVRIDASHLFTSSTTKIGFRKGTFLRTYMYDFMERFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|343496473|ref|ZP_08734569.1| transcriptional regulator CysB [Vibrio nigripulchritudo ATCC 27043]
gi|342821086|gb|EGU55880.1| transcriptional regulator CysB [Vibrio nigripulchritudo ATCC 27043]
Length = 324
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLFTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGEDIVRISSEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E + A+ AI TE L I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQMSEAVAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++++S Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV + +G+
Sbjct: 181 KDHVTIEDLSTYSLVTYVFGFTGRSELDTAFNNAGLTPRIVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L +I ASH+FG + + + ++GT+LRSY+Y F++ +P L R +
Sbjct: 241 GVIASMAVDKELDSDLVAIDASHIFGASTTSIGFRRGTFLRSYMYDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|119476770|ref|ZP_01617080.1| transcriptional regulator CysB [marine gamma proteobacterium
HTCC2143]
gi|119450026|gb|EAW31262.1| transcriptional regulator CysB [marine gamma proteobacterium
HTCC2143]
Length = 324
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 201/306 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFSRSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ I++++E +K++ +EFS G+L+IATTHTQARYALP I+ F +P
Sbjct: 61 PAGEAILKTAGEILRKVESIKQVAQEFSNEKKGSLSIATTHTQARYALPNTIQTFIETYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+E+ + D AI TE L LI +PCY+W+ I+VP H L
Sbjct: 121 EVSLHMHQGTPMQISELAADGTVDFAIATEALELFSDLIMMPCYRWDRAIVVPKGHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L++++ +P++TY F+GR KLD F + L P +V ++D+IKTYV L +GI
Sbjct: 181 KSELTLEDVAAHPIVTYVFGFTGRSKLDEAFIDKGLAPKVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A+D+ D +L ++ ASHLF ++I+++ ++GT+LR ++ FI+ +P L + +
Sbjct: 241 GIVAKMAYDAELDDDLVALDASHLFESSITKIGFRRGTFLRGFMLDFIQQFAPHLTQDIV 300
Query: 301 NKILNN 306
+ +
Sbjct: 301 EEACRS 306
>gi|188492831|ref|ZP_03000101.1| transcriptional regulator, LysR family [Escherichia coli 53638]
gi|300900130|ref|ZP_07118323.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
198-1]
gi|300955301|ref|ZP_07167686.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
175-1]
gi|312973800|ref|ZP_07787972.1| HTH-type transcriptional regulator cbl [Escherichia coli 1827-70]
gi|331642604|ref|ZP_08343739.1| cys regulon transcriptional regulator Cbl [Escherichia coli H736]
gi|331683653|ref|ZP_08384249.1| cys regulon transcriptional regulator Cbl [Escherichia coli H299]
gi|386614580|ref|YP_006134246.1| transcriptional regulator protein [Escherichia coli UMNK88]
gi|415774703|ref|ZP_11487050.1| HTH-type transcriptional regulator cbl [Escherichia coli 3431]
gi|417263058|ref|ZP_12050507.1| cys regulon transcriptional regulator Cbl [Escherichia coli 2.3916]
gi|417613423|ref|ZP_12263884.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_EH250]
gi|417634901|ref|ZP_12285115.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_S1191]
gi|418303320|ref|ZP_12915114.1| HTH-type transcriptional regulator cbl [Escherichia coli UMNF18]
gi|419142836|ref|ZP_13687580.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6A]
gi|419148748|ref|ZP_13693409.1| cbl transcriptional activator [Escherichia coli DEC6B]
gi|419154240|ref|ZP_13698807.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6C]
gi|419159562|ref|ZP_13704071.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6D]
gi|419164777|ref|ZP_13709234.1| cbl transcriptional activator [Escherichia coli DEC6E]
gi|419284533|ref|ZP_13826711.1| cbl transcriptional activator [Escherichia coli DEC10F]
gi|419392063|ref|ZP_13932876.1| cbl transcriptional activator [Escherichia coli DEC15A]
gi|419397095|ref|ZP_13937864.1| cbl transcriptional activator [Escherichia coli DEC15B]
gi|419402446|ref|ZP_13943170.1| cbl transcriptional activator [Escherichia coli DEC15C]
gi|419407562|ref|ZP_13948251.1| cbl transcriptional activator [Escherichia coli DEC15D]
gi|419413139|ref|ZP_13953792.1| cbl transcriptional activator [Escherichia coli DEC15E]
gi|422353199|ref|ZP_16433960.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
117-3]
gi|422790744|ref|ZP_16843448.1| LysR substrate binding domain-containing protein [Escherichia coli
TA007]
gi|432377135|ref|ZP_19620132.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE12]
gi|432417217|ref|ZP_19659827.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE44]
gi|432485741|ref|ZP_19727657.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE212]
gi|432531397|ref|ZP_19768425.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE233]
gi|432580716|ref|ZP_19817142.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE56]
gi|432704762|ref|ZP_19939865.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE171]
gi|432882225|ref|ZP_20098305.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE154]
gi|433130529|ref|ZP_20315971.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE163]
gi|433135232|ref|ZP_20320585.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE166]
gi|433173849|ref|ZP_20358381.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE232]
gi|442597452|ref|ZP_21015243.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|188488030|gb|EDU63133.1| transcriptional regulator, LysR family [Escherichia coli 53638]
gi|300317780|gb|EFJ67564.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
175-1]
gi|300356344|gb|EFJ72214.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
198-1]
gi|310332395|gb|EFP99630.1| HTH-type transcriptional regulator cbl [Escherichia coli 1827-70]
gi|315618038|gb|EFU98630.1| HTH-type transcriptional regulator cbl [Escherichia coli 3431]
gi|323972857|gb|EGB68056.1| LysR substrate binding domain-containing protein [Escherichia coli
TA007]
gi|324018777|gb|EGB87996.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
117-3]
gi|331039402|gb|EGI11622.1| cys regulon transcriptional regulator Cbl [Escherichia coli H736]
gi|331078605|gb|EGI49807.1| cys regulon transcriptional regulator Cbl [Escherichia coli H299]
gi|332343749|gb|AEE57083.1| transcriptional regulator protein [Escherichia coli UMNK88]
gi|339415418|gb|AEJ57090.1| HTH-type transcriptional regulator cbl [Escherichia coli UMNF18]
gi|345362934|gb|EGW95079.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_EH250]
gi|345388392|gb|EGX18203.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_S1191]
gi|377994092|gb|EHV57222.1| cbl transcriptional activator [Escherichia coli DEC6B]
gi|377995478|gb|EHV58595.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6A]
gi|377998279|gb|EHV61374.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6C]
gi|378009606|gb|EHV72562.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC6D]
gi|378010859|gb|EHV73804.1| cbl transcriptional activator [Escherichia coli DEC6E]
gi|378133275|gb|EHW94621.1| cbl transcriptional activator [Escherichia coli DEC10F]
gi|378237758|gb|EHX97778.1| cbl transcriptional activator [Escherichia coli DEC15A]
gi|378244540|gb|EHY04483.1| cbl transcriptional activator [Escherichia coli DEC15B]
gi|378246980|gb|EHY06899.1| cbl transcriptional activator [Escherichia coli DEC15C]
gi|378253941|gb|EHY13805.1| cbl transcriptional activator [Escherichia coli DEC15D]
gi|378259180|gb|EHY18995.1| cbl transcriptional activator [Escherichia coli DEC15E]
gi|386223312|gb|EII45686.1| cys regulon transcriptional regulator Cbl [Escherichia coli 2.3916]
gi|430899427|gb|ELC21532.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE12]
gi|430940122|gb|ELC60312.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE44]
gi|431016138|gb|ELD29685.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE212]
gi|431054083|gb|ELD63665.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE233]
gi|431105547|gb|ELE09882.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE56]
gi|431243579|gb|ELF37964.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE171]
gi|431411731|gb|ELG94842.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE154]
gi|431646407|gb|ELJ13901.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE163]
gi|431657313|gb|ELJ24279.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE166]
gi|431693034|gb|ELJ58453.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE232]
gi|441653932|emb|CCQ01133.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 316
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKSFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|420274926|ref|ZP_14777236.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA40]
gi|390759855|gb|EIO29213.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli PA40]
Length = 324
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 LVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|289673239|ref|ZP_06494129.1| transcriptional regulator CysB [Pseudomonas syringae pv. syringae
FF5]
gi|422617831|ref|ZP_16686532.1| transcriptional regulator CysB [Pseudomonas syringae pv. japonica
str. M301072]
gi|422639363|ref|ZP_16702792.1| transcriptional regulator CysB [Pseudomonas syringae Cit 7]
gi|422667039|ref|ZP_16726904.1| transcriptional regulator CysB [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|424067076|ref|ZP_17804535.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|424071704|ref|ZP_17809126.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|440721728|ref|ZP_20902121.1| transcriptional regulator CysB [Pseudomonas syringae BRIP34876]
gi|440724772|ref|ZP_20905049.1| transcriptional regulator CysB [Pseudomonas syringae BRIP34881]
gi|440743900|ref|ZP_20923208.1| transcriptional regulator CysB [Pseudomonas syringae BRIP39023]
gi|443644395|ref|ZP_21128245.1| Cys regulon transcriptional regulator CysB [Pseudomonas syringae
pv. syringae B64]
gi|330898212|gb|EGH29631.1| transcriptional regulator CysB [Pseudomonas syringae pv. japonica
str. M301072]
gi|330951756|gb|EGH52016.1| transcriptional regulator CysB [Pseudomonas syringae Cit 7]
gi|330977572|gb|EGH77516.1| transcriptional regulator CysB [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|407998512|gb|EKG38922.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|408001573|gb|EKG41870.1| Cys regulon transcriptional activator [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440362754|gb|ELP99935.1| transcriptional regulator CysB [Pseudomonas syringae BRIP34876]
gi|440369637|gb|ELQ06605.1| transcriptional regulator CysB [Pseudomonas syringae BRIP34881]
gi|440374966|gb|ELQ11681.1| transcriptional regulator CysB [Pseudomonas syringae BRIP39023]
gi|443284412|gb|ELS43417.1| Cys regulon transcriptional regulator CysB [Pseudomonas syringae
pv. syringae B64]
Length = 324
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W I+VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCIVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 APKLTLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAIDEAVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|422681244|ref|ZP_16739514.1| transcriptional regulator CysB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331010588|gb|EGH90644.1| transcriptional regulator CysB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 324
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISNFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI EM + D AI TE L L+ +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALEQFSDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ + L+ ++ YP++TY F+GR KLD FS + L P +V ++D+IKTYV L +G+
Sbjct: 181 VPKLPLELLAEYPIVTYVFGFTGRSKLDEAFSHRGLVPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVARMAVDEEVDSDLVVLDASDLFESSVTKIAFRRGTFLRGFMCDFIEKFAPHLTREVM 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAIQ 305
>gi|74312356|ref|YP_310775.1| transcriptional regulator CysB [Shigella sonnei Ss046]
gi|73855833|gb|AAZ88540.1| positive transcriptional regulator for cysteine regulon [Shigella
sonnei Ss046]
Length = 324
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD I TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFTIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|416303023|ref|ZP_11653453.1| Cys regulon transcriptional activator CysB [Shigella flexneri CDC
796-83]
gi|320183859|gb|EFW58691.1| Cys regulon transcriptional activator CysB [Shigella flexneri CDC
796-83]
Length = 324
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQ RYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQTRYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|293415293|ref|ZP_06657936.1| transcriptional regulator CysB-like protein [Escherichia coli B185]
gi|417276515|ref|ZP_12063843.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.2303]
gi|422774123|ref|ZP_16827779.1| LysR substrate binding domain-containing protein [Escherichia coli
H120]
gi|425273121|ref|ZP_18664547.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli TW15901]
gi|432765382|ref|ZP_19999820.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE48]
gi|291432941|gb|EFF05920.1| transcriptional regulator CysB-like protein [Escherichia coli B185]
gi|323948368|gb|EGB44354.1| LysR substrate binding domain-containing protein [Escherichia coli
H120]
gi|386240687|gb|EII77609.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.2303]
gi|408193960|gb|EKI19464.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli TW15901]
gi|431309557|gb|ELF97750.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE48]
Length = 316
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|419809091|ref|ZP_14333977.1| transcriptional regulator Cbl [Escherichia coli O32:H37 str. P4]
gi|385158021|gb|EIF20011.1| transcriptional regulator Cbl [Escherichia coli O32:H37 str. P4]
Length = 316
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKSFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417629199|ref|ZP_12279437.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_MHI813]
gi|418943521|ref|ZP_13496702.1| transcriptional regulator Cbl [Escherichia coli O157:H43 str. T22]
gi|419914207|ref|ZP_14432611.1| transcriptional regulator Cbl [Escherichia coli KD1]
gi|422766560|ref|ZP_16820287.1| LysR substrate binding domain-containing protein [Escherichia coli
E1520]
gi|422833918|ref|ZP_16881982.1| HTH-type transcriptional regulator cbl [Escherichia coli E101]
gi|323936969|gb|EGB33250.1| LysR substrate binding domain-containing protein [Escherichia coli
E1520]
gi|345373167|gb|EGX05128.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_MHI813]
gi|371603345|gb|EHN92000.1| HTH-type transcriptional regulator cbl [Escherichia coli E101]
gi|375321169|gb|EHS67033.1| transcriptional regulator Cbl [Escherichia coli O157:H43 str. T22]
gi|388387255|gb|EIL48878.1| transcriptional regulator Cbl [Escherichia coli KD1]
Length = 316
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|415812152|ref|ZP_11504378.1| HTH-type transcriptional regulator cbl [Escherichia coli LT-68]
gi|417286822|ref|ZP_12074109.1| cys regulon transcriptional regulator Cbl [Escherichia coli
TW07793]
gi|425300674|ref|ZP_18690613.1| putative transcriptional regulator [Escherichia coli 07798]
gi|432802121|ref|ZP_20036102.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE84]
gi|323172568|gb|EFZ58202.1| HTH-type transcriptional regulator cbl [Escherichia coli LT-68]
gi|386249155|gb|EII95326.1| cys regulon transcriptional regulator Cbl [Escherichia coli
TW07793]
gi|408216109|gb|EKI40443.1| putative transcriptional regulator [Escherichia coli 07798]
gi|431349098|gb|ELG35940.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE84]
Length = 316
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ S++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITSLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGAQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|15641909|ref|NP_231541.1| transcriptional regulator CysB [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121727105|ref|ZP_01680279.1| cys regulon transcriptional activator [Vibrio cholerae V52]
gi|147674603|ref|YP_001217440.1| transcriptional regulator CysB [Vibrio cholerae O395]
gi|153217059|ref|ZP_01950823.1| cys regulon transcriptional activator [Vibrio cholerae 1587]
gi|153803506|ref|ZP_01958092.1| cys regulon transcriptional activator [Vibrio cholerae MZO-3]
gi|153819864|ref|ZP_01972531.1| cys regulon transcriptional activator [Vibrio cholerae NCTC 8457]
gi|153824229|ref|ZP_01976896.1| cys regulon transcriptional activator [Vibrio cholerae B33]
gi|153825177|ref|ZP_01977844.1| cys regulon transcriptional activator [Vibrio cholerae MZO-2]
gi|153831025|ref|ZP_01983692.1| cys regulon transcriptional activator [Vibrio cholerae 623-39]
gi|227082037|ref|YP_002810588.1| transcriptional regulator CysB [Vibrio cholerae M66-2]
gi|227118355|ref|YP_002820251.1| cys regulon transcriptional activator [Vibrio cholerae O395]
gi|229507997|ref|ZP_04397502.1| regulatory protein CysB [Vibrio cholerae BX 330286]
gi|229511765|ref|ZP_04401244.1| regulatory protein CysB [Vibrio cholerae B33]
gi|229515286|ref|ZP_04404746.1| regulatory protein CysB [Vibrio cholerae TMA 21]
gi|229518903|ref|ZP_04408346.1| regulatory protein CysB [Vibrio cholerae RC9]
gi|229520366|ref|ZP_04409792.1| regulatory protein CysB [Vibrio cholerae TM 11079-80]
gi|229523927|ref|ZP_04413332.1| regulatory protein CysB [Vibrio cholerae bv. albensis VL426]
gi|229529071|ref|ZP_04418461.1| regulatory protein CysB [Vibrio cholerae 12129(1)]
gi|229607543|ref|YP_002878191.1| transcriptional regulator CysB [Vibrio cholerae MJ-1236]
gi|254286739|ref|ZP_04961693.1| cys regulon transcriptional activator [Vibrio cholerae AM-19226]
gi|254848995|ref|ZP_05238345.1| transcriptional regulator CysB [Vibrio cholerae MO10]
gi|255745334|ref|ZP_05419283.1| regulatory protein CysB [Vibrio cholera CIRS 101]
gi|262153562|ref|ZP_06028691.1| regulatory protein CysB [Vibrio cholerae INDRE 91/1]
gi|262167462|ref|ZP_06035169.1| regulatory protein CysB [Vibrio cholerae RC27]
gi|297579425|ref|ZP_06941353.1| transcriptional regulator CysB [Vibrio cholerae RC385]
gi|298498055|ref|ZP_07007862.1| Cys regulon transcriptional activator [Vibrio cholerae MAK 757]
gi|360035790|ref|YP_004937553.1| transcriptional regulator CysB [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741741|ref|YP_005333710.1| transcriptional regulator CysB [Vibrio cholerae IEC224]
gi|384424898|ref|YP_005634256.1| Regulatory protein CysB [Vibrio cholerae LMA3984-4]
gi|417813952|ref|ZP_12460605.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-49A2]
gi|417817689|ref|ZP_12464318.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HCUF01]
gi|417821253|ref|ZP_12467867.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE39]
gi|417825128|ref|ZP_12471716.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE48]
gi|418334927|ref|ZP_12943841.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-06A1]
gi|418338544|ref|ZP_12947438.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-23A1]
gi|418346462|ref|ZP_12951224.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-28A1]
gi|418350224|ref|ZP_12954955.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-43A1]
gi|418355994|ref|ZP_12958713.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-61A1]
gi|419826886|ref|ZP_14350385.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae CP1033(6)]
gi|419830375|ref|ZP_14353860.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-1A2]
gi|419834054|ref|ZP_14357509.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-61A2]
gi|419837630|ref|ZP_14361068.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-46B1]
gi|421318324|ref|ZP_15768892.1| HTH-type transcriptional regulator CysB [Vibrio cholerae CP1032(5)]
gi|421321679|ref|ZP_15772232.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1038(11)]
gi|421325478|ref|ZP_15776002.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1041(14)]
gi|421329140|ref|ZP_15779650.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1042(15)]
gi|421333047|ref|ZP_15783524.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1046(19)]
gi|421336636|ref|ZP_15787097.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1048(21)]
gi|421340067|ref|ZP_15790499.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-20A2]
gi|421344737|ref|ZP_15795140.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-43B1]
gi|421348177|ref|ZP_15798554.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-46A1]
gi|421351641|ref|ZP_15802006.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-25]
gi|421354574|ref|ZP_15804906.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-45]
gi|422307849|ref|ZP_16395004.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae CP1035(8)]
gi|422897014|ref|ZP_16934464.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-40A1]
gi|422903216|ref|ZP_16938192.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-48A1]
gi|422907100|ref|ZP_16941904.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-70A1]
gi|422913947|ref|ZP_16948453.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HFU-02]
gi|422917756|ref|ZP_16952074.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-02A1]
gi|422923212|ref|ZP_16956370.1| HTH-type transcriptional regulator CysB [Vibrio cholerae BJG-01]
gi|422926153|ref|ZP_16959167.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-38A1]
gi|423145472|ref|ZP_17133066.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-19A1]
gi|423150148|ref|ZP_17137462.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-21A1]
gi|423153968|ref|ZP_17141149.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-22A1]
gi|423157052|ref|ZP_17144145.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-32A1]
gi|423160622|ref|ZP_17147562.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-33A2]
gi|423165442|ref|ZP_17152171.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-48B2]
gi|423731459|ref|ZP_17704762.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-17A1]
gi|423735582|ref|ZP_17708779.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-41B1]
gi|423768470|ref|ZP_17712884.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-50A2]
gi|423822661|ref|ZP_17716671.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-55C2]
gi|423856054|ref|ZP_17720478.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-59A1]
gi|423882928|ref|ZP_17724065.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-60A1]
gi|423895350|ref|ZP_17727097.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-62A1]
gi|423930788|ref|ZP_17731491.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-77A1]
gi|423956414|ref|ZP_17734968.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HE-40]
gi|423985200|ref|ZP_17738517.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HE-46]
gi|423998186|ref|ZP_17741438.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-02C1]
gi|424002903|ref|ZP_17745978.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-17A2]
gi|424006692|ref|ZP_17749662.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-37A1]
gi|424009922|ref|ZP_17752859.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-44C1]
gi|424017079|ref|ZP_17756908.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-55B2]
gi|424020004|ref|ZP_17759790.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-59B1]
gi|424024673|ref|ZP_17764324.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-62B1]
gi|424027558|ref|ZP_17767161.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-69A1]
gi|424586830|ref|ZP_18026409.1| HTH-type transcriptional regulator CysB [Vibrio cholerae CP1030(3)]
gi|424591572|ref|ZP_18030999.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1037(10)]
gi|424595477|ref|ZP_18034798.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1040(13)]
gi|424599393|ref|ZP_18038574.1| HTH-type transcriptional regulator CysB [Vibrio Cholerae
CP1044(17)]
gi|424602114|ref|ZP_18041256.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1047(20)]
gi|424607085|ref|ZP_18046029.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1050(23)]
gi|424610908|ref|ZP_18049747.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-39A1]
gi|424613721|ref|ZP_18052509.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-41A1]
gi|424617701|ref|ZP_18056373.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-42A1]
gi|424622480|ref|ZP_18060988.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-47A1]
gi|424625372|ref|ZP_18063833.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-50A1]
gi|424629858|ref|ZP_18068145.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-51A1]
gi|424633901|ref|ZP_18072001.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-52A1]
gi|424636983|ref|ZP_18074991.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-55A1]
gi|424640892|ref|ZP_18078775.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-56A1]
gi|424645444|ref|ZP_18083180.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-56A2]
gi|424648960|ref|ZP_18086623.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-57A1]
gi|424653213|ref|ZP_18090593.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-57A2]
gi|424657034|ref|ZP_18094319.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-81A2]
gi|429888263|ref|ZP_19369751.1| Cys regulon transcriptional activator CysB [Vibrio cholerae PS15]
gi|440710110|ref|ZP_20890761.1| regulatory protein CysB [Vibrio cholerae 4260B]
gi|443504270|ref|ZP_21071228.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-64A1]
gi|443508168|ref|ZP_21074931.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-65A1]
gi|443512010|ref|ZP_21078648.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-67A1]
gi|443515568|ref|ZP_21082079.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-68A1]
gi|443519362|ref|ZP_21085758.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-71A1]
gi|443524252|ref|ZP_21090465.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-72A2]
gi|443527879|ref|ZP_21093928.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-78A1]
gi|443531849|ref|ZP_21097863.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-7A1]
gi|443535646|ref|ZP_21101524.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-80A1]
gi|443539193|ref|ZP_21105047.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-81A1]
gi|449055663|ref|ZP_21734331.1| Cys regulon transcriptional activator CysB [Vibrio cholerae O1 str.
Inaba G4222]
gi|9656441|gb|AAF95055.1| cys regulon transcriptional activator [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121630483|gb|EAX62875.1| cys regulon transcriptional activator [Vibrio cholerae V52]
gi|124113918|gb|EAY32738.1| cys regulon transcriptional activator [Vibrio cholerae 1587]
gi|124120967|gb|EAY39710.1| cys regulon transcriptional activator [Vibrio cholerae MZO-3]
gi|126509594|gb|EAZ72188.1| cys regulon transcriptional activator [Vibrio cholerae NCTC 8457]
gi|126518249|gb|EAZ75474.1| cys regulon transcriptional activator [Vibrio cholerae B33]
gi|146316486|gb|ABQ21025.1| cys regulon transcriptional activator [Vibrio cholerae O395]
gi|148873489|gb|EDL71624.1| cys regulon transcriptional activator [Vibrio cholerae 623-39]
gi|149741156|gb|EDM55207.1| cys regulon transcriptional activator [Vibrio cholerae MZO-2]
gi|150423166|gb|EDN15113.1| cys regulon transcriptional activator [Vibrio cholerae AM-19226]
gi|227009925|gb|ACP06137.1| cys regulon transcriptional activator [Vibrio cholerae M66-2]
gi|227013805|gb|ACP10015.1| cys regulon transcriptional activator [Vibrio cholerae O395]
gi|229332845|gb|EEN98331.1| regulatory protein CysB [Vibrio cholerae 12129(1)]
gi|229337508|gb|EEO02525.1| regulatory protein CysB [Vibrio cholerae bv. albensis VL426]
gi|229342732|gb|EEO07724.1| regulatory protein CysB [Vibrio cholerae TM 11079-80]
gi|229343592|gb|EEO08567.1| regulatory protein CysB [Vibrio cholerae RC9]
gi|229347991|gb|EEO12950.1| regulatory protein CysB [Vibrio cholerae TMA 21]
gi|229351730|gb|EEO16671.1| regulatory protein CysB [Vibrio cholerae B33]
gi|229355502|gb|EEO20423.1| regulatory protein CysB [Vibrio cholerae BX 330286]
gi|229370198|gb|ACQ60621.1| regulatory protein CysB [Vibrio cholerae MJ-1236]
gi|254844700|gb|EET23114.1| transcriptional regulator CysB [Vibrio cholerae MO10]
gi|255737164|gb|EET92560.1| regulatory protein CysB [Vibrio cholera CIRS 101]
gi|262024159|gb|EEY42853.1| regulatory protein CysB [Vibrio cholerae RC27]
gi|262030689|gb|EEY49324.1| regulatory protein CysB [Vibrio cholerae INDRE 91/1]
gi|297537019|gb|EFH75852.1| transcriptional regulator CysB [Vibrio cholerae RC385]
gi|297542388|gb|EFH78438.1| Cys regulon transcriptional activator [Vibrio cholerae MAK 757]
gi|327484451|gb|AEA78858.1| Regulatory protein CysB [Vibrio cholerae LMA3984-4]
gi|340036438|gb|EGQ97414.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-49A2]
gi|340037412|gb|EGQ98387.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HCUF01]
gi|340038884|gb|EGQ99858.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE39]
gi|340046613|gb|EGR07543.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE48]
gi|341621307|gb|EGS47053.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-70A1]
gi|341621450|gb|EGS47195.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-48A1]
gi|341622375|gb|EGS48038.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-40A1]
gi|341636638|gb|EGS61332.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-02A1]
gi|341637608|gb|EGS62286.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HFU-02]
gi|341644304|gb|EGS68529.1| HTH-type transcriptional regulator CysB [Vibrio cholerae BJG-01]
gi|341646359|gb|EGS70473.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-38A1]
gi|356417636|gb|EHH71251.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-06A1]
gi|356418508|gb|EHH72105.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-21A1]
gi|356423082|gb|EHH76543.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-19A1]
gi|356428528|gb|EHH81754.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-22A1]
gi|356430186|gb|EHH83395.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-23A1]
gi|356433541|gb|EHH86730.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-28A1]
gi|356439709|gb|EHH92674.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-32A1]
gi|356444720|gb|EHH97529.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-43A1]
gi|356445719|gb|EHH98521.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-33A2]
gi|356450963|gb|EHI03668.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-48B2]
gi|356452492|gb|EHI05171.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-61A1]
gi|356646944|gb|AET26999.1| transcriptional regulator CysB [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795251|gb|AFC58722.1| transcriptional regulator CysB [Vibrio cholerae IEC224]
gi|395916582|gb|EJH27412.1| HTH-type transcriptional regulator CysB [Vibrio cholerae CP1032(5)]
gi|395917316|gb|EJH28144.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1041(14)]
gi|395918673|gb|EJH29497.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1038(11)]
gi|395927674|gb|EJH38437.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1042(15)]
gi|395928449|gb|EJH39202.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1046(19)]
gi|395931735|gb|EJH42479.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1048(21)]
gi|395939350|gb|EJH50032.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-20A2]
gi|395940817|gb|EJH51498.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-43B1]
gi|395942756|gb|EJH53432.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-46A1]
gi|395952086|gb|EJH62700.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-25]
gi|395953699|gb|EJH64312.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-45]
gi|395958907|gb|EJH69362.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-56A2]
gi|395959512|gb|EJH69940.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-57A2]
gi|395962158|gb|EJH72459.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-42A1]
gi|395970869|gb|EJH80586.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-47A1]
gi|395973472|gb|EJH83031.1| HTH-type transcriptional regulator CysB [Vibrio cholerae CP1030(3)]
gi|395975855|gb|EJH85329.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1047(20)]
gi|408007230|gb|EKG45323.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-39A1]
gi|408012514|gb|EKG50291.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-50A1]
gi|408013130|gb|EKG50875.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-41A1]
gi|408018206|gb|EKG55665.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-52A1]
gi|408023610|gb|EKG60771.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-56A1]
gi|408024033|gb|EKG61169.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-55A1]
gi|408031460|gb|EKG68082.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1037(10)]
gi|408032370|gb|EKG68956.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1040(13)]
gi|408032909|gb|EKG69478.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-57A1]
gi|408041776|gb|EKG77870.1| HTH-type transcriptional regulator CysB [Vibrio Cholerae
CP1044(17)]
gi|408043260|gb|EKG79266.1| HTH-type transcriptional regulator CysB [Vibrio cholerae
CP1050(23)]
gi|408053592|gb|EKG88597.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-81A2]
gi|408055211|gb|EKG90150.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-51A1]
gi|408607676|gb|EKK81079.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae CP1033(6)]
gi|408618915|gb|EKK91967.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae CP1035(8)]
gi|408620148|gb|EKK93160.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-1A2]
gi|408624081|gb|EKK97033.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-17A1]
gi|408629765|gb|EKL02434.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-41B1]
gi|408633825|gb|EKL06120.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-50A2]
gi|408634637|gb|EKL06872.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-55C2]
gi|408640957|gb|EKL12739.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-59A1]
gi|408641052|gb|EKL12833.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-60A1]
gi|408648876|gb|EKL20193.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-61A2]
gi|408654220|gb|EKL25362.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-77A1]
gi|408655150|gb|EKL26275.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HC-62A1]
gi|408657619|gb|EKL28697.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HE-40]
gi|408664431|gb|EKL35268.1| bacterial regulatory helix-turn-helix , lysR family protein [Vibrio
cholerae HE-46]
gi|408845300|gb|EKL85416.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-37A1]
gi|408846073|gb|EKL86185.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-17A2]
gi|408852541|gb|EKL92363.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-02C1]
gi|408856178|gb|EKL95873.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-46B1]
gi|408859767|gb|EKL99421.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-55B2]
gi|408863717|gb|EKM03191.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-44C1]
gi|408867098|gb|EKM06460.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-59B1]
gi|408870375|gb|EKM09655.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-62B1]
gi|408878861|gb|EKM17854.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-69A1]
gi|429224672|gb|EKY31012.1| Cys regulon transcriptional activator CysB [Vibrio cholerae PS15]
gi|439974333|gb|ELP50510.1| regulatory protein CysB [Vibrio cholerae 4260B]
gi|443431215|gb|ELS73767.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-64A1]
gi|443435110|gb|ELS81254.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-65A1]
gi|443438993|gb|ELS88708.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-67A1]
gi|443442978|gb|ELS96280.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-68A1]
gi|443446780|gb|ELT03436.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-71A1]
gi|443449586|gb|ELT09877.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-72A2]
gi|443453751|gb|ELT17569.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-78A1]
gi|443457239|gb|ELT24636.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-7A1]
gi|443461186|gb|ELT32259.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-80A1]
gi|443465293|gb|ELT39953.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HC-81A1]
gi|448264702|gb|EMB01939.1| Cys regulon transcriptional activator CysB [Vibrio cholerae O1 str.
Inaba G4222]
Length = 324
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++ YPL+TY F+GR +LD F+ +TP +V ++D+IKTYV + +G+
Sbjct: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|410636466|ref|ZP_11347060.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola lipolytica E3]
gi|410144078|dbj|GAC14265.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola lipolytica E3]
Length = 324
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAENLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++
Sbjct: 61 DAGQDVINISREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIKGFMGKYK 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATEALHLYNDLVMLPCYHWNRSIIVNRDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ Y L+TY F+GR +LD+ F L P IV ++D+IKTYV L +GI
Sbjct: 181 KTSITIQDIAEYSLVTYVFGFTGRSELDQAFDRAGLEPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDDKLDGDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYEFIERFAPHLTKDVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|331647592|ref|ZP_08348684.1| cys regulon transcriptional regulator Cbl [Escherichia coli M605]
gi|387829899|ref|YP_003349836.1| transcriptional regulator for cys regulon [Escherichia coli SE15]
gi|417662579|ref|ZP_12312160.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli AA86]
gi|432500447|ref|ZP_19742205.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE216]
gi|432694768|ref|ZP_19929973.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE162]
gi|432919406|ref|ZP_20123537.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE173]
gi|432927213|ref|ZP_20128753.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE175]
gi|432981390|ref|ZP_20170166.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE211]
gi|433096807|ref|ZP_20283002.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE139]
gi|433106220|ref|ZP_20292207.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE148]
gi|281179056|dbj|BAI55386.1| transcriptional regulator for cys regulon [Escherichia coli SE15]
gi|330911797|gb|EGH40307.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli AA86]
gi|331043316|gb|EGI15454.1| cys regulon transcriptional regulator Cbl [Escherichia coli M605]
gi|431028767|gb|ELD41806.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE216]
gi|431234295|gb|ELF29697.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE162]
gi|431444720|gb|ELH25742.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE173]
gi|431445440|gb|ELH26367.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE175]
gi|431492145|gb|ELH71748.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE211]
gi|431616351|gb|ELI85414.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE139]
gi|431627856|gb|ELI96238.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE148]
Length = 316
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSSEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|399520160|ref|ZP_10760936.1| Probable transcriptional regulator CysB [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111601|emb|CCH37495.1| Probable transcriptional regulator CysB [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 324
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISAFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L + LI +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGTPTQIAEMAADGSVDFAIATEGLELFNDLIMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + A LF +++++ ++GT+LR ++ FI+ +P L R +
Sbjct: 241 GIVAKMAVDAKLDPDLVVLDADDLFEPSVTKIGFRRGTFLRGFMCDFIERFAPHLTRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|418294863|ref|ZP_12906741.1| transcriptional regulator CysB [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379066224|gb|EHY78967.1| transcriptional regulator CysB [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 324
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 197/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPQVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ +P++TY F+GR KLD F + L+P +V ++D+IKTYV L +G+
Sbjct: 181 LDKLTLEALAEHPIVTYVFGFTGRSKLDEAFGHRGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDAKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIQQFAPHLDRDML 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 ERAVH 305
>gi|298380457|ref|ZP_06990056.1| HTH-type transcriptional regulator cysB [Escherichia coli FVEC1302]
gi|298277899|gb|EFI19413.1| HTH-type transcriptional regulator cysB [Escherichia coli FVEC1302]
Length = 324
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GGIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|26248299|ref|NP_754339.1| transcriptional regulator Cbl [Escherichia coli CFT073]
gi|91211215|ref|YP_541201.1| transcriptional regulator Cbl [Escherichia coli UTI89]
gi|110642130|ref|YP_669860.1| transcriptional regulator Cbl [Escherichia coli 536]
gi|218699446|ref|YP_002407075.1| transcriptional regulator Cbl [Escherichia coli IAI39]
gi|222156727|ref|YP_002556866.1| HTH-type transcriptional regulator cbl [Escherichia coli LF82]
gi|227885572|ref|ZP_04003377.1| transcriptional regulator Cbl [Escherichia coli 83972]
gi|237704376|ref|ZP_04534857.1| transcriptional regulator cbl [Escherichia sp. 3_2_53FAA]
gi|300936515|ref|ZP_07151431.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
21-1]
gi|300975276|ref|ZP_07172927.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
45-1]
gi|300993987|ref|ZP_07180629.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
200-1]
gi|306814159|ref|ZP_07448325.1| transcriptional regulator Cbl [Escherichia coli NC101]
gi|331658045|ref|ZP_08359007.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA206]
gi|386599825|ref|YP_006101331.1| transcriptional regulator Cbl [Escherichia coli IHE3034]
gi|386604047|ref|YP_006110347.1| transcriptional regulator Cbl [Escherichia coli UM146]
gi|386619583|ref|YP_006139163.1| transcriptional regulator protein [Escherichia coli NA114]
gi|386624612|ref|YP_006144340.1| DNA-binding transcriptional activator for the ssuEADCB and tauABCD
operons [Escherichia coli O7:K1 str. CE10]
gi|386629727|ref|YP_006149447.1| transcriptional regulator Cbl [Escherichia coli str. 'clone D i2']
gi|386634647|ref|YP_006154366.1| transcriptional regulator Cbl [Escherichia coli str. 'clone D i14']
gi|386639513|ref|YP_006106311.1| transcriptional regulator Cbl [Escherichia coli ABU 83972]
gi|387617324|ref|YP_006120346.1| transcriptional regulator Cbl [Escherichia coli O83:H1 str. NRG
857C]
gi|415841055|ref|ZP_11522277.1| HTH-type transcriptional regulator cbl [Escherichia coli RN587/1]
gi|416339062|ref|ZP_11675000.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli WV_060327]
gi|417281842|ref|ZP_12069142.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3003]
gi|419700804|ref|ZP_14228407.1| transcriptional regulator Cbl [Escherichia coli SCI-07]
gi|422359445|ref|ZP_16440082.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
110-3]
gi|422364629|ref|ZP_16445142.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
153-1]
gi|422367606|ref|ZP_16448037.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
16-3]
gi|422375280|ref|ZP_16455547.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
60-1]
gi|422379789|ref|ZP_16459973.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
57-2]
gi|422755347|ref|ZP_16809172.1| LysR substrate binding domain-containing protein [Escherichia coli
H263]
gi|422838072|ref|ZP_16886045.1| HTH-type transcriptional regulator cbl [Escherichia coli H397]
gi|423702279|ref|ZP_17676738.1| HTH-type transcriptional regulator cbl [Escherichia coli H730]
gi|425278264|ref|ZP_18669516.1| transcriptional regulator cbl [Escherichia coli ARS4.2123]
gi|432381674|ref|ZP_19624619.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE15]
gi|432387492|ref|ZP_19630382.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE16]
gi|432412197|ref|ZP_19654863.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE39]
gi|432422307|ref|ZP_19664855.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE178]
gi|432436665|ref|ZP_19679055.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE188]
gi|432441420|ref|ZP_19683761.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE189]
gi|432446542|ref|ZP_19688841.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE191]
gi|432457036|ref|ZP_19699223.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE201]
gi|432466049|ref|ZP_19708138.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE205]
gi|432471307|ref|ZP_19713354.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE206]
gi|432476178|ref|ZP_19718178.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE208]
gi|432496042|ref|ZP_19737841.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE214]
gi|432504736|ref|ZP_19746466.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE220]
gi|432514243|ref|ZP_19751469.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE224]
gi|432524139|ref|ZP_19761269.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE230]
gi|432554073|ref|ZP_19790797.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE47]
gi|432559207|ref|ZP_19795880.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE49]
gi|432569003|ref|ZP_19805521.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE53]
gi|432574014|ref|ZP_19810496.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE55]
gi|432584200|ref|ZP_19820597.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE57]
gi|432588268|ref|ZP_19824624.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE58]
gi|432593199|ref|ZP_19829517.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE60]
gi|432607806|ref|ZP_19843995.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE67]
gi|432611743|ref|ZP_19847906.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE72]
gi|432616935|ref|ZP_19853056.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE75]
gi|432646507|ref|ZP_19882297.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE86]
gi|432651498|ref|ZP_19887255.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE87]
gi|432656085|ref|ZP_19891791.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE93]
gi|432699363|ref|ZP_19934521.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE169]
gi|432710953|ref|ZP_19946015.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE6]
gi|432713717|ref|ZP_19948758.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE8]
gi|432732698|ref|ZP_19967531.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE45]
gi|432745986|ref|ZP_19980655.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE43]
gi|432754749|ref|ZP_19989300.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE22]
gi|432759782|ref|ZP_19994277.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE46]
gi|432778880|ref|ZP_20013123.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE59]
gi|432783888|ref|ZP_20018069.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE63]
gi|432787825|ref|ZP_20021957.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE65]
gi|432821262|ref|ZP_20054954.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE118]
gi|432827406|ref|ZP_20061058.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE123]
gi|432898998|ref|ZP_20109690.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE192]
gi|432938189|ref|ZP_20136566.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE183]
gi|432972165|ref|ZP_20161033.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE207]
gi|432978734|ref|ZP_20167551.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE209]
gi|432985693|ref|ZP_20174417.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE215]
gi|432995670|ref|ZP_20184281.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE218]
gi|433000246|ref|ZP_20188776.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE223]
gi|433007932|ref|ZP_20196350.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE229]
gi|433014146|ref|ZP_20202507.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE104]
gi|433023776|ref|ZP_20211777.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE106]
gi|433028954|ref|ZP_20216814.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE109]
gi|433048318|ref|ZP_20235682.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE120]
gi|433058394|ref|ZP_20245453.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE124]
gi|433073141|ref|ZP_20259805.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE129]
gi|433078088|ref|ZP_20264639.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE131]
gi|433082874|ref|ZP_20269339.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE133]
gi|433087610|ref|ZP_20273991.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE137]
gi|433101464|ref|ZP_20287561.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE145]
gi|433115859|ref|ZP_20301663.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE153]
gi|433120575|ref|ZP_20306250.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE157]
gi|433125496|ref|ZP_20311071.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE160]
gi|433139559|ref|ZP_20324830.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE167]
gi|433144540|ref|ZP_20329692.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE168]
gi|433149508|ref|ZP_20334543.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE174]
gi|433163762|ref|ZP_20348507.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE179]
gi|433168892|ref|ZP_20353523.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE180]
gi|433183590|ref|ZP_20367854.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE85]
gi|433188739|ref|ZP_20372842.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE88]
gi|433212826|ref|ZP_20396428.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE99]
gi|433323268|ref|ZP_20400638.1| transcriptional regulator Cbl [Escherichia coli J96]
gi|442604734|ref|ZP_21019579.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli Nissle 1917]
gi|26108703|gb|AAN80906.1|AE016762_159 Transcriptional regulator cbl [Escherichia coli CFT073]
gi|91072789|gb|ABE07670.1| transcriptional activator cbl [Escherichia coli UTI89]
gi|110343722|gb|ABG69959.1| transcriptional regulator cbl [Escherichia coli 536]
gi|218369432|emb|CAR17195.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli IAI39]
gi|222033732|emb|CAP76473.1| HTH-type transcriptional regulator cbl [Escherichia coli LF82]
gi|226900742|gb|EEH87001.1| transcriptional regulator cbl [Escherichia sp. 3_2_53FAA]
gi|227837145|gb|EEJ47611.1| transcriptional regulator Cbl [Escherichia coli 83972]
gi|294491068|gb|ADE89824.1| transcriptional regulator Cbl [Escherichia coli IHE3034]
gi|300305012|gb|EFJ59532.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
200-1]
gi|300410396|gb|EFJ93934.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
45-1]
gi|300458343|gb|EFK21836.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
21-1]
gi|305852318|gb|EFM52769.1| transcriptional regulator Cbl [Escherichia coli NC101]
gi|307554005|gb|ADN46780.1| transcriptional regulator Cbl [Escherichia coli ABU 83972]
gi|307626531|gb|ADN70835.1| transcriptional regulator Cbl [Escherichia coli UM146]
gi|312946585|gb|ADR27412.1| transcriptional regulator Cbl [Escherichia coli O83:H1 str. NRG
857C]
gi|315286746|gb|EFU46171.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
110-3]
gi|315292659|gb|EFU52011.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
153-1]
gi|315300638|gb|EFU59866.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
16-3]
gi|320193255|gb|EFW67893.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli WV_060327]
gi|323187720|gb|EFZ73021.1| HTH-type transcriptional regulator cbl [Escherichia coli RN587/1]
gi|323956411|gb|EGB52154.1| LysR substrate binding domain-containing protein [Escherichia coli
H263]
gi|324008972|gb|EGB78191.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
57-2]
gi|324013413|gb|EGB82632.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
60-1]
gi|331056293|gb|EGI28302.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA206]
gi|333970084|gb|AEG36889.1| transcriptional regulator protein [Escherichia coli NA114]
gi|349738350|gb|AEQ13056.1| DNA-binding transcriptional activator for the ssuEADCB and tauABCD
operons [Escherichia coli O7:K1 str. CE10]
gi|355420626|gb|AER84823.1| transcriptional regulator Cbl [Escherichia coli str. 'clone D i2']
gi|355425546|gb|AER89742.1| transcriptional regulator Cbl [Escherichia coli str. 'clone D i14']
gi|371613996|gb|EHO02481.1| HTH-type transcriptional regulator cbl [Escherichia coli H397]
gi|380348053|gb|EIA36338.1| transcriptional regulator Cbl [Escherichia coli SCI-07]
gi|385710568|gb|EIG47549.1| HTH-type transcriptional regulator cbl [Escherichia coli H730]
gi|386246171|gb|EII87901.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3003]
gi|408202431|gb|EKI27543.1| transcriptional regulator cbl [Escherichia coli ARS4.2123]
gi|430906885|gb|ELC28390.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE16]
gi|430908677|gb|ELC30070.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE15]
gi|430935423|gb|ELC55745.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE39]
gi|430945066|gb|ELC65155.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE178]
gi|430962989|gb|ELC80834.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE188]
gi|430967261|gb|ELC84623.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE189]
gi|430972815|gb|ELC89783.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE191]
gi|430982918|gb|ELC99607.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE201]
gi|430993633|gb|ELD09977.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE205]
gi|430998525|gb|ELD14766.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE206]
gi|431006119|gb|ELD21126.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE208]
gi|431024585|gb|ELD37750.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE214]
gi|431039719|gb|ELD50539.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE220]
gi|431042841|gb|ELD53329.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE224]
gi|431052463|gb|ELD62114.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE230]
gi|431084260|gb|ELD90426.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE47]
gi|431091412|gb|ELD97149.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE49]
gi|431100854|gb|ELE05824.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE53]
gi|431108725|gb|ELE12697.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE55]
gi|431116002|gb|ELE19463.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE57]
gi|431120601|gb|ELE23599.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE58]
gi|431128177|gb|ELE30469.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE60]
gi|431138904|gb|ELE40716.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE67]
gi|431149167|gb|ELE50440.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE72]
gi|431155175|gb|ELE55936.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE75]
gi|431180544|gb|ELE80431.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE86]
gi|431191367|gb|ELE90752.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE87]
gi|431192143|gb|ELE91517.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE93]
gi|431244612|gb|ELF38920.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE169]
gi|431249745|gb|ELF43900.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE6]
gi|431257520|gb|ELF50444.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE8]
gi|431275885|gb|ELF66912.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE45]
gi|431292123|gb|ELF82619.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE43]
gi|431302950|gb|ELF92129.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE22]
gi|431308955|gb|ELF97234.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE46]
gi|431327033|gb|ELG14378.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE59]
gi|431329756|gb|ELG17042.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE63]
gi|431337542|gb|ELG24630.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE65]
gi|431368109|gb|ELG54577.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE118]
gi|431372655|gb|ELG58317.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE123]
gi|431426650|gb|ELH08694.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE192]
gi|431464273|gb|ELH44395.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE183]
gi|431478847|gb|ELH58591.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE209]
gi|431482866|gb|ELH62568.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE207]
gi|431501130|gb|ELH80116.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE215]
gi|431507383|gb|ELH85669.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE218]
gi|431510263|gb|ELH88510.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE223]
gi|431524465|gb|ELI01412.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE229]
gi|431531553|gb|ELI08211.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE104]
gi|431537427|gb|ELI13575.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE106]
gi|431543170|gb|ELI18159.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE109]
gi|431565671|gb|ELI38749.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE120]
gi|431571037|gb|ELI43945.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE124]
gi|431588873|gb|ELI60143.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE129]
gi|431597759|gb|ELI67665.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE131]
gi|431603201|gb|ELI72628.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE133]
gi|431606137|gb|ELI75519.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE137]
gi|431620594|gb|ELI89471.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE145]
gi|431635385|gb|ELJ03600.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE153]
gi|431643133|gb|ELJ10836.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE157]
gi|431646881|gb|ELJ14373.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE160]
gi|431661937|gb|ELJ28749.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE167]
gi|431663086|gb|ELJ29854.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE168]
gi|431671829|gb|ELJ38103.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE174]
gi|431688377|gb|ELJ53901.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE180]
gi|431688849|gb|ELJ54367.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE179]
gi|431706782|gb|ELJ71352.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE88]
gi|431707688|gb|ELJ72221.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE85]
gi|431734743|gb|ELJ98120.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE99]
gi|432348436|gb|ELL42887.1| transcriptional regulator Cbl [Escherichia coli J96]
gi|441714991|emb|CCQ05556.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli Nissle 1917]
Length = 316
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|377577453|ref|ZP_09806435.1| cys regulon transcriptional activator Cbl [Escherichia hermannii
NBRC 105704]
gi|377541191|dbj|GAB51600.1| cys regulon transcriptional activator Cbl [Escherichia hermannii
NBRC 105704]
Length = 316
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 197/303 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA +++FNLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAAKRDFNLTEVASMLYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ FS G LTIATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFSNDTRGVLTIATTHTQARYSLPAVIKSFRELYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHP+L
Sbjct: 121 EVRLELIQGTPQEIETLLENGTADIGIASERLSNDPLLVAYPWFRWSHSLLVPADHPILQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L ++ +PLITY +GR ++D FS + + P IVL +SD+IKTYVEL +GI
Sbjct: 181 ASPVTLDDLGRWPLITYRQGITGRSRIDEAFSRKSIVPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A + NL + A HLF + +K+G R+YV+ FI+L + L I
Sbjct: 241 GIVAEQASGEHDGGNLVRLDARHLFDANTVWLGLKRGQLQRNYVWRFIELCNSALTVDEI 300
Query: 301 NKI 303
++
Sbjct: 301 KRL 303
>gi|320539475|ref|ZP_08039144.1| putative DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Serratia symbiotica str.
Tucson]
gi|320030600|gb|EFW12610.1| putative DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Serratia symbiotica str.
Tucson]
Length = 324
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQP +SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPSISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARY LP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDRGHLYIATTHTQARYTLPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLIMLPCYHWNRTVVVKPDHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KSHITIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPLQDSDLMTVDARGVFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 DNAI 304
>gi|146307569|ref|YP_001188034.1| transcriptional regulator CysB [Pseudomonas mendocina ymp]
gi|421501732|ref|ZP_15948689.1| transcriptional regulator CysB [Pseudomonas mendocina DLHK]
gi|145575770|gb|ABP85302.1| transcriptional regulator, LysR family [Pseudomonas mendocina ymp]
gi|400347475|gb|EJO95828.1| transcriptional regulator CysB [Pseudomonas mendocina DLHK]
Length = 324
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISAFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L + LI +PCY+W ++VP HPL
Sbjct: 121 DVALHMHQGTPTQIAEMAADGSVDFAIATEGLELFNDLIMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D+ D +L + A LF +++++ ++GT+LR ++ FI+ +P L R +
Sbjct: 241 GIVAKMAVDARLDPDLVVLDADQLFEPSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|238794715|ref|ZP_04638319.1| HTH-type transcriptional regulator cysB [Yersinia intermedia ATCC
29909]
gi|238725946|gb|EEQ17496.1| HTH-type transcriptional regulator cysB [Yersinia intermedia ATCC
29909]
Length = 324
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 190/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KTHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L + A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVIVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|350551438|ref|ZP_08920653.1| transcriptional regulator, LysR family [Thiorhodospira sibirica
ATCC 700588]
gi|349797048|gb|EGZ50826.1| transcriptional regulator, LysR family [Thiorhodospira sibirica
ATCC 700588]
Length = 325
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 190/291 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R + E V++NFNLTE A AL+TSQ GVSK I +LEEEL + IF+R GKR+ GLT
Sbjct: 1 MNFQQLRIISETVKRNFNLTEVANALFTSQSGVSKHIRDLEEELGVQIFVRKGKRLLGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G +L +E ++ + + +K + F + G L +ATTHTQA YALP+++ F FP
Sbjct: 61 EAGGELLEIVERMLLDTQNIKNLSCRFRHCEQGELIVATTHTQACYALPQVVVAFKTLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L + NP++I M+ +AD+ + TE L+ L S PCY+W + ++VP +H L
Sbjct: 121 KVHLVLHECNPREIKAMLVEGRADVGVATEALADVADLGSFPCYRWRHCVVVPREHALTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +SL+ ++ YP++TY +GR ++DR F+ L P IVL ++++D+IKTYV L +GI
Sbjct: 181 LPELSLEALAQYPILTYHEGIAGRSQIDRAFARAGLKPDIVLSSMDADVIKTYVRLDLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLL 291
GIIA +A+ S RD L + ++ LF +R+ +++G YLR + Y FI+L
Sbjct: 241 GIIAPMAYSSLRDDGLHLLESAALFDMNTTRIALRRGYYLRGFAYRFIELC 291
>gi|416264467|ref|ZP_11641076.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Shigella dysenteriae CDC 74-1112]
gi|420380779|ref|ZP_14880237.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae
225-75]
gi|320176224|gb|EFW51286.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Shigella dysenteriae CDC 74-1112]
gi|391301362|gb|EIQ59255.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae
225-75]
Length = 316
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ G+S+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGISRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKSFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|262404255|ref|ZP_06080810.1| regulatory protein CysB [Vibrio sp. RC586]
gi|262349287|gb|EEY98425.1| regulatory protein CysB [Vibrio sp. RC586]
Length = 336
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 13 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 72
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 73 PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 132
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 133 KVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 192
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++ YPL+TY F+GR +LD F+ +TP +V ++D+IKTYV + +G+
Sbjct: 193 KERVTIEDLATYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 252
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I SH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 253 GVIASMAVDKKQDTDLVAIDVSHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 312
Query: 301 NKILN 305
+ ++
Sbjct: 313 EQAIS 317
>gi|432450113|ref|ZP_19692379.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE193]
gi|433033773|ref|ZP_20221495.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE112]
gi|430980236|gb|ELC96998.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE193]
gi|431552407|gb|ELI26368.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE112]
Length = 316
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|372266410|ref|ZP_09502458.1| transcriptional regulator CysB [Alteromonas sp. S89]
Length = 324
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL ++IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AIL++ IM+++E +K++ +EFS G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEAILKTAGEIMRKVENIKQVAQEFSNDKRGSLAIATTHTQARYALPTVIKGFISRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+EM + AD AI TE L L+ +P Y+W I+VP H L
Sbjct: 121 EVSLHMHQGTPMQISEMAADGTADFAIATEALELFSDLVMMPVYRWNRCILVPKGHELAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+E++ YP++TY F+GR KLD F + L+P +V ++D+IKTYV L +GI
Sbjct: 181 VPKLTLEEVAKYPIVTYVFGFTGRSKLDEAFLEKGLSPKVVFTAADADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A + D +L ++ AS LF ++++++ ++G +LR ++Y F + +P L R+ +
Sbjct: 241 GIVADMAAVEDEDSDLVALDASDLFESSVTKIGFRKGIFLRGFMYEFFQQFAPHLTRELV 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|90412204|ref|ZP_01220210.1| putative cys regulon transcriptional activator [Photobacterium
profundum 3TCK]
gi|90326928|gb|EAS43313.1| putative cys regulon transcriptional activator [Photobacterium
profundum 3TCK]
Length = 324
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQIRYIVEIVDHNLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R I+ +E +K + E + + G L IATTHTQARYALP +IK FT ++P
Sbjct: 61 PAGVDIVRISRDILSRVESIKAVAGEHTHPEIGTLNIATTHTQARYALPHVIKYFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + N D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVGNGTTDFAIATEALHLYQDMIMLPCYHWNRSIVVRTDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KADITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPRIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASH+F + + + K+GT+LR+Y+Y F++ +P L R+ +
Sbjct: 241 GVIASMAMDPEVDSDLVEIDASHIFEASTTNIGFKKGTFLRAYMYDFMERFAPHLTRETV 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|374702303|ref|ZP_09709173.1| transcriptional regulator CysB [Pseudomonas sp. S9]
Length = 324
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 195/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALPK+I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPKVISGFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L + L+ +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPLQIAEMAADGTVDFAIATEGLELFNDLVMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ Y ++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEYSIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF +++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAEMAVDPALDPDLVVLDASELFEASVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVL 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|410613105|ref|ZP_11324173.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola psychrophila 170]
gi|410167247|dbj|GAC38062.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola psychrophila 170]
Length = 324
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++
Sbjct: 61 EAGQDVINISREILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLVMLPCYHWNRSIIVNRDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++++I+ Y L+TY F+GR LD+ FS + P IV ++D+IKTYV L +G+
Sbjct: 181 KTTITIEDIAEYNLVTYVFGFTGRSSLDQAFSSAGIEPKIVFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAIDDKLDSDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYEFIERFAPHLTKSVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|392551812|ref|ZP_10298949.1| transcriptional regulator CysB [Pseudoalteromonas spongiae
UST010723-006]
Length = 325
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAENLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++E +K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 PAGKDIINISREILAKVESIKAVANEHTLPDQGKLNIATTHTQARYALPNVIQGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P+QI++ AD AI TE L LI +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPQQISDAAARGDADFAIATEALHLYTDLIMLPCYHWNRSIVVAKDHPLAA 180
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
N++++++++ +PLITY F+GR +LD+ F+ L P IV ++D+IKTYV L +G
Sbjct: 181 KANNLTIQDVAAFPLITYVFGFTGRSELDKAFTKHGLEPQIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D DK+L I ASHLF + +++ ++GT+LRSY+Y FI+ +P L++
Sbjct: 241 VGVVASMAIDEMNDKDLVVIDASHLFEASTTKIGFRKGTFLRSYMYDFIERFAPHLDKTI 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|343499355|ref|ZP_08737333.1| transcriptional regulator CysB [Vibrio tubiashii ATCC 19109]
gi|342823035|gb|EGU57702.1| transcriptional regulator CysB [Vibrio tubiashii ATCC 19109]
Length = 289
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 189/289 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R + I+ +E +K + E + + G L I+TTHTQARYALP +IK FT ++P
Sbjct: 61 SAGQDIIRISQEILARVESIKAVAGEHTHPEMGTLNISTTHTQARYALPDVIKGFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P Q++E I A+ AI TE L I +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKSHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++YPL+TY F+GR +LD F+ LTP +V ++D+IKTYV + +G+
Sbjct: 181 KEKVTIQDLASYPLVTYVFGFTGRSELDTAFNKYGLTPRVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIK 289
G+IAS+A D +D +L +I ASH+FG + + + ++GT+LRSY++ F++
Sbjct: 241 GVIASMAIDQEQDTDLVAIDASHIFGASTTSIGFRRGTFLRSYMFDFME 289
>gi|170019687|ref|YP_001724641.1| transcriptional regulator Cbl [Escherichia coli ATCC 8739]
gi|419175553|ref|ZP_13719396.1| cbl transcriptional activator [Escherichia coli DEC7B]
gi|432370136|ref|ZP_19613224.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE10]
gi|432627574|ref|ZP_19863552.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE77]
gi|432661211|ref|ZP_19896857.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE111]
gi|169754615|gb|ACA77314.1| transcriptional regulator, LysR family [Escherichia coli ATCC 8739]
gi|378033869|gb|EHV96438.1| cbl transcriptional activator [Escherichia coli DEC7B]
gi|430885269|gb|ELC08195.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE10]
gi|431163403|gb|ELE63824.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE77]
gi|431200327|gb|ELE99053.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE111]
Length = 316
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPGVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|330503569|ref|YP_004380438.1| transcriptional regulator CysB [Pseudomonas mendocina NK-01]
gi|328917855|gb|AEB58686.1| transcriptional regulator CysB [Pseudomonas mendocina NK-01]
Length = 324
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 193/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISAFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L + LI +PCY+W ++VP HPL
Sbjct: 121 DVSLHMHQGTPTQIAEMAADGSVDFAIATEGLELFNDLIMMPCYRWNRCVVVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLNLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + A LF +++++ ++GT+LR ++ FI+ +P L R +
Sbjct: 241 GIVAKMAVDPKLDPDLVVLDADDLFEPSVTKIGFRRGTFLRGFMCDFIERFAPHLTRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|161936301|ref|YP_130654.2| transcriptional regulator CysB [Photobacterium profundum SS9]
Length = 324
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQIRYIVEIVDHNLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R I+ +E +K + E + + G L IATTHTQARYALP +IK FT ++P
Sbjct: 61 PAGVDIVRISRDILSRVESIKAVAGEHTHPEIGTLNIATTHTQARYALPHVIKYFTARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + N D AI TE L +I +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPSQIADAVGNGTTDFAIATEALHLYQDIIMLPCYHWNRSIVVRADHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KADITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPRIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASH+F + + + K+GT+LR+Y+Y F++ +P L R+ +
Sbjct: 241 GVIASMAMDPEVDSDLVKIDASHIFEASTTNIGFKKGTFLRAYMYDFMERFAPHLTRETV 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|82777470|ref|YP_403819.1| transcriptional regulator Cbl [Shigella dysenteriae Sd197]
gi|309787918|ref|ZP_07682528.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae 1617]
gi|81241618|gb|ABB62328.1| transcriptional regulator cys regulon [Shigella dysenteriae Sd197]
gi|308924317|gb|EFP69814.1| HTH-type transcriptional regulator cbl [Shigella dysenteriae 1617]
Length = 316
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFAHKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|334703013|ref|ZP_08518879.1| transcriptional regulator CysB-like protein [Aeromonas caviae
Ae398]
Length = 315
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 201/295 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+++NLT+ A AL+TSQ GVS+ I ELEEEL + +FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREAARRDYNLTDVANALFTSQSGVSRHIRELEEELGLALFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + + ++K+ F+ D+G L IATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILGDADNIRKLASTFANRDSGRLLIATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 LVQLELRQGSPEEIVRLVQTGEVDIGISSEQLDKSEGVVAFPYYRWHHNIVVPEQHPLTA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++++P++TY +GR ++D F+ + P I+L +SD+IKTYVEL MG+
Sbjct: 181 ERELTLAALAHWPIVTYQAGLTGRARVDDAFAEAGIVPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +AFDS RDK L + S LF + + +KQG + ++ + FI+L +P+L
Sbjct: 241 GILADMAFDSQRDKGLVQLDGSRLFAPHTAWIGLKQGQFQHNFAWQFIQLCNPEL 295
>gi|46914072|emb|CAG20852.1| putative cys regulon transcriptional activator [Photobacterium
profundum SS9]
Length = 328
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 5 MKLQQIRYIVEIVDHNLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFERSGKHLTKVT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R I+ +E +K + E + + G L IATTHTQARYALP +IK FT ++P
Sbjct: 65 PAGVDIVRISRDILSRVESIKAVAGEHTHPEIGTLNIATTHTQARYALPHVIKYFTARYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI + + N D AI TE L +I +PCY W I+V DHPL
Sbjct: 125 KVSLHMHQGTPSQIADAVGNGTTDFAIATEALHLYQDIIMLPCYHWNRSIVVRADHPLAK 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 185 KADITIHDLAAYSLVTYVFGFTGRSELDSAFNRSGLTPRIVFTATDADVIKTYVRLGIGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASH+F + + + K+GT+LR+Y+Y F++ +P L R+ +
Sbjct: 245 GVIASMAMDPEVDSDLVKIDASHIFEASTTNIGFKKGTFLRAYMYDFMERFAPHLTRETV 304
Query: 301 NK 302
++
Sbjct: 305 DQ 306
>gi|56460810|ref|YP_156091.1| transcriptional regulator CysB [Idiomarina loihiensis L2TR]
gi|56179820|gb|AAV82542.1| Probable positive transcriptional regulator for cysteine regulon
[Idiomarina loihiensis L2TR]
Length = 324
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVTNHNLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRTGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + ++ ++ +K + E + + G L IATTHTQARYALP +I+ F Q+P
Sbjct: 61 PAGKDIIAVAQQVLDNVQSIKTVAAEHTLPNQGKLNIATTHTQARYALPSVIQRFIQQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG+P+QI+E +AD AI TE L LI +PCY W I+VP HPL
Sbjct: 121 KVSLHMHQGSPEQISEAAAKGRADFAIATEALHLYHDLIMLPCYHWNRSIVVPKSHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ +++ +I+ +PL+TY F+GR +LD+ F+ P IV ++D+IKTYV + +GI
Sbjct: 181 LSKLTIDDIAQFPLVTYVHGFTGRSELDKAFADAGHEPKIVFTATDADVIKTYVRMGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A+D D +L +I A H+F + +++ ++GT+LR+Y+Y FI+ +P L R +
Sbjct: 241 GVLASMAYDPKEDTDLVAIPAEHMFAHSTTKIGFRRGTFLRTYMYDFIENFAPHLTRDRV 300
Query: 301 NK 302
K
Sbjct: 301 QK 302
>gi|420258385|ref|ZP_14761120.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404514190|gb|EKA27990.1| transcriptional regulator CysB [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 324
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 190/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L + A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPIQDPDLVIVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|218695597|ref|YP_002403264.1| transcriptional regulator Cbl [Escherichia coli 55989]
gi|407469860|ref|YP_006783697.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407481476|ref|YP_006778625.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2011C-3493]
gi|410482026|ref|YP_006769572.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417867102|ref|ZP_12512141.1| cbl [Escherichia coli O104:H4 str. C227-11]
gi|422988099|ref|ZP_16978872.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. C227-11]
gi|422994990|ref|ZP_16985754.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. C236-11]
gi|423000067|ref|ZP_16990821.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 09-7901]
gi|423003736|ref|ZP_16994482.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 04-8351]
gi|423010307|ref|ZP_17001041.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-3677]
gi|423019534|ref|ZP_17010243.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4404]
gi|423024700|ref|ZP_17015397.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4522]
gi|423030521|ref|ZP_17021209.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4623]
gi|423038348|ref|ZP_17029022.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423043470|ref|ZP_17034137.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423045196|ref|ZP_17035856.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423053735|ref|ZP_17042542.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423060710|ref|ZP_17049506.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429719574|ref|ZP_19254508.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9450]
gi|429771461|ref|ZP_19303484.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02030]
gi|429781391|ref|ZP_19313321.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02033-1]
gi|429785041|ref|ZP_19316946.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02092]
gi|429791022|ref|ZP_19322879.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02093]
gi|429796848|ref|ZP_19328657.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02281]
gi|429798447|ref|ZP_19330248.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02318]
gi|429806960|ref|ZP_19338687.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02913]
gi|429811793|ref|ZP_19343483.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-03439]
gi|429817380|ref|ZP_19349021.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-04080]
gi|429822591|ref|ZP_19354189.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-03943]
gi|429903968|ref|ZP_19369947.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9990]
gi|429908106|ref|ZP_19374070.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9941]
gi|429913979|ref|ZP_19379927.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4984]
gi|429919010|ref|ZP_19384942.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-5604]
gi|429924829|ref|ZP_19390743.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4986]
gi|429928766|ref|ZP_19394668.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4987]
gi|429935306|ref|ZP_19401192.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4988]
gi|429940986|ref|ZP_19406860.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-5603]
gi|429943666|ref|ZP_19409529.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-6006]
gi|429951262|ref|ZP_19417108.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec12-0465]
gi|429954575|ref|ZP_19420407.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec12-0466]
gi|218352329|emb|CAU98095.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli 55989]
gi|341920391|gb|EGT69999.1| cbl [Escherichia coli O104:H4 str. C227-11]
gi|354861825|gb|EHF22263.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. C236-11]
gi|354867110|gb|EHF27532.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. C227-11]
gi|354869183|gb|EHF29593.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 04-8351]
gi|354873038|gb|EHF33415.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 09-7901]
gi|354879790|gb|EHF40126.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-3677]
gi|354890035|gb|EHF50280.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4404]
gi|354892808|gb|EHF53012.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4522]
gi|354895507|gb|EHF55693.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354897219|gb|EHF57377.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4623]
gi|354899596|gb|EHF59741.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354912632|gb|EHF72630.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354915637|gb|EHF75613.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354918143|gb|EHF78100.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-4632 C4]
gi|406777188|gb|AFS56612.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053773|gb|AFS73824.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065895|gb|AFS86942.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
2009EL-2071]
gi|429347167|gb|EKY83943.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02033-1]
gi|429349818|gb|EKY86554.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02092]
gi|429360944|gb|EKY97601.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02030]
gi|429362375|gb|EKY99022.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02093]
gi|429363334|gb|EKY99975.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02281]
gi|429365764|gb|EKZ02376.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02318]
gi|429376619|gb|EKZ13147.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-02913]
gi|429380661|gb|EKZ17150.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-03943]
gi|429381107|gb|EKZ17595.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-03439]
gi|429392882|gb|EKZ29281.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. 11-04080]
gi|429405912|gb|EKZ42174.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4984]
gi|429408030|gb|EKZ44276.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9990]
gi|429411144|gb|EKZ47355.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9450]
gi|429414986|gb|EKZ51158.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4987]
gi|429422388|gb|EKZ58507.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4986]
gi|429429152|gb|EKZ65221.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-5604]
gi|429433236|gb|EKZ69270.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-4988]
gi|429437151|gb|EKZ73162.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-5603]
gi|429441880|gb|EKZ77845.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-6006]
gi|429447869|gb|EKZ83786.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec12-0465]
gi|429452413|gb|EKZ88298.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec11-9941]
gi|429457532|gb|EKZ93370.1| HTH-type transcriptional regulator cbl [Escherichia coli O104:H4
str. Ec12-0466]
Length = 316
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKSFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + H+F + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHIFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|157161471|ref|YP_001458789.1| transcriptional regulator Cbl [Escherichia coli HS]
gi|157067151|gb|ABV06406.1| transcriptional regulator Cbl [Escherichia coli HS]
Length = 316
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L YIVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLAYIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|348029372|ref|YP_004872058.1| transcriptional regulator CysB [Glaciecola nitratireducens FR1064]
gi|347946715|gb|AEP30065.1| transcriptional regulator CysB [Glaciecola nitratireducens FR1064]
Length = 341
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 197/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 18 MKLQQLRYIVEVLNNNLNVSATAETLFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 77
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ G+ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 78 EAGKDVINISREILAKVESIKAVAREHTLPDQGKLNIATTHTQARYALPDVIKGFMSKYP 137
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV +HPL
Sbjct: 138 RVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLVMLPCYHWNRSVIVNKEHPLAK 197
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++I+ YPL+TY F+GR +LD+ F++ L P IV ++D+IKTYV L +GI
Sbjct: 198 KTSITIQDIAKYPLVTYVFGFTGRSELDQAFNIAGLEPKIVFTATDADVIKTYVRLGVGI 257
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A + D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L + +
Sbjct: 258 GVIASMAVSDDLDSDLVKIDASHLFDYSTTKIGFRKGSFLRNYMYDFIERFAPHLTKDVV 317
Query: 301 NKIL 304
+ +
Sbjct: 318 ERAM 321
>gi|431927451|ref|YP_007240485.1| transcriptional regulator [Pseudomonas stutzeri RCH2]
gi|431825738|gb|AGA86855.1| transcriptional regulator [Pseudomonas stutzeri RCH2]
Length = 324
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPQVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ +P++TY F+GR KLD F + L P +V ++D+IKTYV L +G+
Sbjct: 181 LDKLTLEALAEHPIVTYVFGFTGRSKLDEAFGHRGLVPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P L+R +
Sbjct: 241 GIVARMAVDPKLDADLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIQQFAPHLDRDML 300
Query: 301 NKILN 305
K +
Sbjct: 301 EKAIQ 305
>gi|432905180|ref|ZP_20114086.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE194]
gi|433038936|ref|ZP_20226540.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE113]
gi|433198545|ref|ZP_20382457.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE94]
gi|431433480|gb|ELH15152.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE194]
gi|431552396|gb|ELI26358.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE113]
gi|431723211|gb|ELJ87173.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE94]
Length = 316
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEERNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|332534933|ref|ZP_08410752.1| regulatory protein CysB [Pseudoalteromonas haloplanktis ANT/505]
gi|359441979|ref|ZP_09231862.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20429]
gi|392535844|ref|ZP_10282981.1| transcriptional regulator CysB [Pseudoalteromonas arctica A 37-1-2]
gi|332035606|gb|EGI72097.1| regulatory protein CysB [Pseudoalteromonas haloplanktis ANT/505]
gi|358036148|dbj|GAA68111.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20429]
Length = 325
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 192/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 GAGEDIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPNVIQGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
NS+++ +I+ YPLITY F+GR +LD+ FS L P+IV ++D+IKTYV L +G
Sbjct: 181 KANSLTVADIAQYPLITYVFGFTGRSELDKAFSAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVSDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|417121712|ref|ZP_11971140.1| cys regulon transcriptional regulator Cbl [Escherichia coli
97.0246]
gi|432809633|ref|ZP_20043526.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE101]
gi|432968096|ref|ZP_20157011.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE203]
gi|386148564|gb|EIG95001.1| cys regulon transcriptional regulator Cbl [Escherichia coli
97.0246]
gi|431362401|gb|ELG48979.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE101]
gi|431471213|gb|ELH51106.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE203]
Length = 316
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGAQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|119469512|ref|ZP_01612416.1| transcriptional regulator for cysteine regulon [Alteromonadales
bacterium TW-7]
gi|359448568|ref|ZP_09238095.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20480]
gi|392539292|ref|ZP_10286429.1| transcriptional regulator CysB [Pseudoalteromonas marina mano4]
gi|119447047|gb|EAW28317.1| transcriptional regulator for cysteine regulon [Alteromonadales
bacterium TW-7]
gi|358045612|dbj|GAA74344.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20480]
Length = 325
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 192/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 SAGEDIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIQGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
NS+++ +I+ YPLITY F+GR +LD+ FS L P+IV ++D+IKTYV L +G
Sbjct: 181 KANSLTVADIAEYPLITYVFGFTGRSELDKAFSAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDEITDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|392308270|ref|ZP_10270804.1| transcriptional regulator CysB [Pseudoalteromonas citrea NCIMB
1889]
Length = 325
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 193/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 SAGTEIINIAREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPNVIQGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAQ 180
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+++++++++ YPLITY F+GR +LD+ F+ L P+IV ++D+IKTYV L +G
Sbjct: 181 KASNLTVQDVAQYPLITYVFGFTGRSELDKAFNAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D++L I ASHLF + +++ ++G++LR Y+Y FI+ +P L +
Sbjct: 241 VGVVASMAIDIETDQDLVCIDASHLFEASTTKIGFRKGSFLRGYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|331673536|ref|ZP_08374299.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA280]
gi|331068809|gb|EGI40201.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA280]
Length = 316
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +LI+ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLIAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|443468197|ref|ZP_21058431.1| Cys regulon transcriptional activator CysB [Pseudomonas
pseudoalcaligenes KF707]
gi|442897287|gb|ELS24260.1| Cys regulon transcriptional activator CysB [Pseudomonas
pseudoalcaligenes KF707]
Length = 324
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 192/305 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVIGSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVALHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD FS + LTP +V ++D+IKTYV L +G+
Sbjct: 181 LPKLTLEALAEHPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + A LF ++++++ ++GT+LR ++ FI+ +P L R
Sbjct: 241 GIVAKMAVDEKLDSDLVVLDAGELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRDMQ 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|410632405|ref|ZP_11343065.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola arctica BSs20135]
gi|410148057|dbj|GAC19932.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola arctica BSs20135]
Length = 324
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 194/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ GQ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++
Sbjct: 61 EAGQDVINISREILAKVESIKAVSREHTLPDQGKLNIATTHTQARYALPDVIKGFMNKYS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLVMLPCYHWNRSIIVNRDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI++++++ Y L+TY F+GR LD+ FS + P IV ++D+IKTYV L +G+
Sbjct: 181 KTSITIEDLAEYNLVTYVFGFTGRSSLDQAFSSAGIEPKIVFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LRSY+Y FI+ +P L + +
Sbjct: 241 GVIASMAIDDKLDSDLVKIDASHLFEYSTTKIGFRKGSFLRSYMYEFIERFAPHLTKTVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|429215980|ref|ZP_19207139.1| transcriptional regulator CysB [Pseudomonas sp. M1]
gi|428153633|gb|EKX00187.1| transcriptional regulator CysB [Pseudomonas sp. M1]
Length = 324
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++LYTSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I++++E +K+I +EFS G L+IATTHTQARYALP +I F Q+P
Sbjct: 61 PAGERIINTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPSVISGFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L LI +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLIMMPCYRWNRCVIVPQGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ ++ P++TY F+GR KLD F+ + L P +V ++D+IKTYV L +G+
Sbjct: 181 VPKLTLELLAEQPIVTYVFGFTGRSKLDEAFNQRGLVPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + ASHLF ++++++ ++GT+LR ++ FI+ +P L R+ +
Sbjct: 241 GIVAHMAVDPKLDSDLVMLDASHLFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTRELL 300
Query: 301 NKILN 305
K +
Sbjct: 301 AKAVQ 305
>gi|238754977|ref|ZP_04616326.1| HTH-type transcriptional regulator cysB [Yersinia ruckeri ATCC
29473]
gi|238706836|gb|EEP99204.1| HTH-type transcriptional regulator cysB [Yersinia ruckeri ATCC
29473]
Length = 324
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+R ++ +++ +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E++ YP++TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KAHVTIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L ++ A +F + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|359452315|ref|ZP_09241666.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20495]
gi|414069226|ref|ZP_11405221.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. Bsw20308]
gi|358050659|dbj|GAA77915.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20495]
gi|410808341|gb|EKS14312.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. Bsw20308]
Length = 325
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 193/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 GAGEEIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIQGFMKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+N++++ +I+ YPLITY F+GR +LD+ FS L P+IV ++D+IKTYV L +G
Sbjct: 181 KVNNLTVADIAQYPLITYVFGFTGRSELDKAFSAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQISDTDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|422909677|ref|ZP_16944320.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-09]
gi|424659616|ref|ZP_18096865.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-16]
gi|341634437|gb|EGS59195.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-09]
gi|408051972|gb|EKG87038.1| HTH-type transcriptional regulator CysB [Vibrio cholerae HE-16]
Length = 324
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ +E +K + E + + G L I+TTHTQARYALP++IK FT ++P
Sbjct: 61 PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P Q++E I A+ AI TE L I +PCY W I+VP DHPL
Sbjct: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++++ YPL+TY F+GR +LD F+ + P +V ++D+IKTYV + +G+
Sbjct: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMAPKVVFTATDADVIKTYVRMGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +D +L +I ASH+F + + + ++GT+LRSY++ F++ +P L R +
Sbjct: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 EQAIS 305
>gi|218705521|ref|YP_002413040.1| transcriptional regulator Cbl [Escherichia coli UMN026]
gi|293405461|ref|ZP_06649453.1| transcriptional regulator CysB-like protein [Escherichia coli
FVEC1412]
gi|417586981|ref|ZP_12237752.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_C165-02]
gi|419932554|ref|ZP_14449856.1| transcriptional regulator Cbl [Escherichia coli 576-1]
gi|432353886|ref|ZP_19597160.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE2]
gi|432402240|ref|ZP_19644993.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE26]
gi|432426466|ref|ZP_19668968.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE181]
gi|432489646|ref|ZP_19731521.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE213]
gi|432538138|ref|ZP_19775041.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE235]
gi|432602558|ref|ZP_19838802.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE66]
gi|432641411|ref|ZP_19877246.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE83]
gi|432666342|ref|ZP_19901924.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE116]
gi|432775088|ref|ZP_20009370.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE54]
gi|432793182|ref|ZP_20027267.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE78]
gi|432799139|ref|ZP_20033162.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE79]
gi|432839654|ref|ZP_20073141.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE140]
gi|432862180|ref|ZP_20086865.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE146]
gi|432869290|ref|ZP_20089975.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE147]
gi|432886913|ref|ZP_20101002.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE158]
gi|432913014|ref|ZP_20118824.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE190]
gi|433018935|ref|ZP_20207178.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE105]
gi|433053481|ref|ZP_20240674.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE122]
gi|433178625|ref|ZP_20363034.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE82]
gi|433203551|ref|ZP_20387331.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE95]
gi|218432618|emb|CAR13512.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli UMN026]
gi|291427669|gb|EFF00696.1| transcriptional regulator CysB-like protein [Escherichia coli
FVEC1412]
gi|345336609|gb|EGW69043.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_C165-02]
gi|388416849|gb|EIL76724.1| transcriptional regulator Cbl [Escherichia coli 576-1]
gi|430876127|gb|ELB99648.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE2]
gi|430927070|gb|ELC47657.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE26]
gi|430955919|gb|ELC74601.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE181]
gi|431020622|gb|ELD33963.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE213]
gi|431070052|gb|ELD78372.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE235]
gi|431141132|gb|ELE42897.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE66]
gi|431182027|gb|ELE81854.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE83]
gi|431201717|gb|ELF00414.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE116]
gi|431318803|gb|ELG06498.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE54]
gi|431339926|gb|ELG26980.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE78]
gi|431344006|gb|ELG30962.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE79]
gi|431389806|gb|ELG73517.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE140]
gi|431405399|gb|ELG88641.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE146]
gi|431410571|gb|ELG93728.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE147]
gi|431416958|gb|ELG99429.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE158]
gi|431440443|gb|ELH21772.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE190]
gi|431532839|gb|ELI09347.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE105]
gi|431571402|gb|ELI44285.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE122]
gi|431704089|gb|ELJ68722.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE82]
gi|431722050|gb|ELJ86028.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE95]
Length = 316
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|421499035|ref|ZP_15946100.1| transcriptional regulator CysB protein [Aeromonas media WS]
gi|407181956|gb|EKE55948.1| transcriptional regulator CysB protein [Aeromonas media WS]
Length = 315
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 201/295 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+++NLTE A AL+TSQ GVS+ I ELEEEL + +FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREASRRDYNLTEVANALFTSQSGVSRHIRELEEELGLALFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + + ++K+ F+ D+G L +ATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILGDADNIRKLASTFANRDSGRLLVATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 LVQLELRQGSPEEIVRLVQTGEVDIGISSEQLDKSEGVVAFPYYRWHHNIVVPEQHPLTA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++++P++TY +GR+++D F+ + P I+L +SD+IKTYVEL MG+
Sbjct: 181 ERELTLAALAHWPIVTYQAGLTGRVRVDEAFAEAGIHPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +AFD RDK L + S LF + + +KQG + ++ + FI+L +P+L
Sbjct: 241 GILADMAFDPQRDKGLVQLDGSRLFAPHTAWIGLKQGQFQHNFTWQFIQLCNPEL 295
>gi|417639676|ref|ZP_12289824.1| HTH-type transcriptional regulator cbl [Escherichia coli TX1999]
gi|419170613|ref|ZP_13714502.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC7A]
gi|419181262|ref|ZP_13724878.1| cbl transcriptional activator [Escherichia coli DEC7C]
gi|419186704|ref|ZP_13730220.1| cbl transcriptional activator [Escherichia coli DEC7D]
gi|419191976|ref|ZP_13735434.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC7E]
gi|420386003|ref|ZP_14885358.1| HTH-type transcriptional regulator cbl [Escherichia coli EPECa12]
gi|345393620|gb|EGX23391.1| HTH-type transcriptional regulator cbl [Escherichia coli TX1999]
gi|378016265|gb|EHV79152.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC7A]
gi|378024090|gb|EHV86753.1| cbl transcriptional activator [Escherichia coli DEC7C]
gi|378029572|gb|EHV92182.1| cbl transcriptional activator [Escherichia coli DEC7D]
gi|378039233|gb|EHW01730.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC7E]
gi|391305719|gb|EIQ63497.1| HTH-type transcriptional regulator cbl [Escherichia coli EPECa12]
Length = 316
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|315126935|ref|YP_004068938.1| transcriptional regulator CysB [Pseudoalteromonas sp. SM9913]
gi|359445740|ref|ZP_09235458.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20439]
gi|315015449|gb|ADT68787.1| transcriptional regulator CysB [Pseudoalteromonas sp. SM9913]
gi|358040392|dbj|GAA71707.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20439]
Length = 325
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEEIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIKGFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++++++ +I+ YPLITY F+GR +LD+ F+ L P+IV ++D+IKTYV L +G
Sbjct: 181 KVDNLTVADIAQYPLITYVFGFTGRSELDKAFNAYGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVNDSDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|420320817|ref|ZP_14822651.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2850-71]
gi|391249780|gb|EIQ09008.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2850-71]
Length = 316
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG+P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR + D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRTDDAFTRKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|421617541|ref|ZP_16058529.1| transcriptional regulator CysB [Pseudomonas stutzeri KOS6]
gi|409780529|gb|EKN60158.1| transcriptional regulator CysB [Pseudomonas stutzeri KOS6]
Length = 324
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N++ A++L+TSQPG+SK I LE+EL +++F R GK + +T
Sbjct: 1 MKLQQLRYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ + I+++ E +K+I +EFS G L+IATTHTQARYALP++I F Q+P
Sbjct: 61 PAGERIITTAGEILRKCESIKQIAQEFSNEKKGTLSIATTHTQARYALPRVISSFIKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI EM + D AI TE L L+ +PCY+W +IVP HPL
Sbjct: 121 DVSLHMHQGTPMQIAEMAADGTVDFAIATEGLELFGDLVMMPCYRWNRCVIVPQGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L ++L+ ++ +P++TY F+GR KLD F + L+P +V ++D+IKTYV L +G+
Sbjct: 181 LEKLTLETLAEHPIVTYVFGFTGRSKLDEAFGHRGLSPKVVFTAADADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +A D D +L + AS LF ++++++ ++GT+LR ++ FI+ +P LNR +
Sbjct: 241 GIVARMAVDPKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIQQFAPHLNRDML 300
Query: 301 N 301
Sbjct: 301 E 301
>gi|167623538|ref|YP_001673832.1| transcriptional regulator CysB [Shewanella halifaxensis HAW-EB4]
gi|167353560|gb|ABZ76173.1| transcriptional regulator, LysR family [Shewanella halifaxensis
HAW-EB4]
Length = 324
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPHIIRGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEAMHLYSDLIMLPCYHWNRSIVVTRDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSNISIEDLARFPLVTYVFGFDRASEIEKSFNRAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D + DK+L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L R +
Sbjct: 241 GVIASMAIDEHMDKDLVAIDASHLFAHSTTKIGFRKGNFLRTYMYDFIEYFAPHLTRPVV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|359438156|ref|ZP_09228196.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20311]
gi|358027168|dbj|GAA64445.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Pseudoalteromonas sp. BSi20311]
Length = 325
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +IK FT ++P
Sbjct: 61 GAGEEIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIKGFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++++++ +I+ YPLITY F+GR +LD+ F+ L P+IV ++D+IKTYV L +G
Sbjct: 181 KVDNLTVADIAQYPLITYVFGFTGRSELDKAFNAYGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVNDSDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|301046422|ref|ZP_07193580.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
185-1]
gi|432432192|ref|ZP_19674624.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE187]
gi|432844857|ref|ZP_20077756.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE141]
gi|433208141|ref|ZP_20391821.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE97]
gi|300301594|gb|EFJ57979.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
185-1]
gi|430953741|gb|ELC72639.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE187]
gi|431395184|gb|ELG78697.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE141]
gi|431730257|gb|ELJ93825.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE97]
Length = 316
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P +I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPLEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|117618462|ref|YP_855148.1| transcriptional regulator CysB-like protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559869|gb|ABK36817.1| HTH-type transcriptional regulator cbl [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 315
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 201/295 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q R +REA R+++NLTE A AL+TSQ GVS+ I ELEEEL I++FIR+GKR+ G+T
Sbjct: 1 MNFQQLRIIREAARRDYNLTEVANALFTSQSGVSRHIRELEEELGIELFIRYGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++K+ F+ ++G L +ATTHTQARYALP+++K F QFP
Sbjct: 61 EPGKELLVIAERILNDANNIRKLASTFANRESGRLLVATTHTQARYALPRVVKAFREQFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I +++ + DI I +E L S+ +++ P Y+W + I+VP HPL
Sbjct: 121 LVQLELRQGSPEEIVRLVQTGEVDIGISSEQLDKSEGVVAFPYYRWHHNIVVPEQHPLTA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++++P+ITY +GR ++D F+ + P I+L +SD+IKTYVEL MG+
Sbjct: 181 ERELTLAALAHWPIITYQAGLTGRARVDEAFAEAGIAPQILLTAQDSDVIKTYVELEMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A +AFD+ RDK L + S LF + + +KQG + ++ + FI+L +P+L
Sbjct: 241 GILADMAFDTQRDKGLVQLDGSRLFAPHTAWIGLKQGQFQHNFAWQFIQLCNPEL 295
>gi|120598577|ref|YP_963151.1| transcriptional regulator CysB [Shewanella sp. W3-18-1]
gi|146293344|ref|YP_001183768.1| transcriptional regulator CysB [Shewanella putrefaciens CN-32]
gi|386314019|ref|YP_006010184.1| transcriptional activator of cys regulon, CysB [Shewanella
putrefaciens 200]
gi|120558670|gb|ABM24597.1| transcriptional regulator, LysR family [Shewanella sp. W3-18-1]
gi|145565034|gb|ABP75969.1| transcriptional regulator, LysR family [Shewanella putrefaciens
CN-32]
gi|319426644|gb|ADV54718.1| transcriptional activator of cys regulon, CysB [Shewanella
putrefaciens 200]
Length = 325
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 193/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II++F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPTIIRQFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W ++VP +HPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKEHPLAT 180
Query: 181 -LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
+++++++ YPL+TY F ++++ F+ L P +V ++D++KTYV L +G
Sbjct: 181 RTQKMTIEDLARYPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D N DK+L +I A HLF + +++ ++G++LRSY+Y FI+ +P L R
Sbjct: 241 VGVIASMAIDPNIDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTRDV 300
Query: 300 INK 302
+ K
Sbjct: 301 VEK 303
>gi|417150948|ref|ZP_11990687.1| HTH-type transcriptional regulator CysB [Escherichia coli 1.2264]
gi|386160442|gb|EIH22253.1| HTH-type transcriptional regulator CysB [Escherichia coli 1.2264]
Length = 324
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 190/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DH L
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHLLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L + A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|392545695|ref|ZP_10292832.1| transcriptional regulator CysB [Pseudoalteromonas rubra ATCC 29570]
Length = 325
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 192/303 (63%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 SAGNEIINIAREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPNVIQGFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P+QI++ AD AI TE L LI +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYGDLIMLPCYHWNRSIVVTKDHPLAK 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
S I++++++ +PLITY F+GR +LD+ F+ L+P+IV ++D+IKTYV L +G
Sbjct: 181 KGSNITVQDVAKFPLITYVFGFTGRSELDKAFNAHGLSPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++A++A D D +L I ASHLF + +++ ++G++LR Y+Y FI+ +P L +
Sbjct: 241 VGVLATMAVDEITDNDLVCIDASHLFEASTTKIGFRKGSFLRGYMYDFIERFAPHLTKDL 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|332161470|ref|YP_004298047.1| transcriptional regulator CysB-like protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665700|gb|ADZ42344.1| transcriptional regulator CysB-like protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 318
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 204/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLAVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLQSGEADIGIATEVLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 EPNITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|330861341|emb|CBX71580.1| HTH-type transcriptional regulator cbl [Yersinia enterocolitica
W22703]
Length = 321
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 204/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 4 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 63
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 64 EPGKELLAVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 123
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 124 QVKLVISQGNPQEIAAMLQSGEADIGIATEVLMSDESVAAFPYYRWHHAIVVPENHPLTQ 183
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 184 EPNITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 243
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 244 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 299
>gi|386308676|ref|YP_006004732.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Yersinia enterocolitica subsp. palearctica Y11]
gi|433549308|ref|ZP_20505352.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Yersinia enterocolitica IP 10393]
gi|318605450|emb|CBY26948.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Yersinia enterocolitica subsp. palearctica Y11]
gi|431788443|emb|CCO68392.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Yersinia enterocolitica IP 10393]
Length = 318
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 204/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLAVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLQSGEADIGIATEVLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 EPNITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|432671064|ref|ZP_19906595.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE119]
gi|431211138|gb|ELF09121.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE119]
Length = 316
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLIAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417833284|ref|ZP_12479732.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
01-09591]
gi|340734166|gb|EGR63296.1| transcriptional regulator Cbl [Escherichia coli O104:H4 str.
01-09591]
Length = 316
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREVARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKSFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A + +KNL + H+F + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GIVAEQSSGEQEEKNLIRLDTRHIFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|381394319|ref|ZP_09920036.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379329921|dbj|GAB55169.1| LysR family transcriptional regulator, cys regulon transcriptional
activator [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 324
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 193/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +K + +E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 DAGKEVINISREILAKVESIKSVAREHTLPDQGKLNIATTHTQARYALPDVIKGFMQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+++ +AD AI TE L + LI +PCY W +IV HPL
Sbjct: 121 KVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLIMLPCYHWNRSVIVNKSHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++++I+ Y L+TY F+GR +LDR FS L P IV ++D+IKTYV L +G+
Sbjct: 181 KTNITIQDIAKYSLVTYVFGFTGRSELDRAFSEAGLEPKIVFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDEVLDNDLVKIDASHLFDYSTTKIGFRKGSFLRNYMYEFIERFAPHLTKSVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAM 304
>gi|145298751|ref|YP_001141592.1| transcriptional regulator CysB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418360894|ref|ZP_12961557.1| transcriptional regulator CysB [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851523|gb|ABO89844.1| Cys regulon transcriptional activator [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687877|gb|EHI52451.1| transcriptional regulator CysB [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 324
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 191/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVANHRLNVSATAESLYTSQPGISKQVRMLEDELGIQIFERSGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +++ I+ ++E +K + + + + G L IATTHTQARYALP +IK F +FP
Sbjct: 61 PAGRDVIKIANEILGKVESIKSVASQHTHPEQGTLHIATTHTQARYALPDVIKGFIKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E + QAD AI TE L + LI +PCY W +IVP HPL
Sbjct: 121 KVSLHMHQGTPTQISEAVVKGQADFAIATEALHLYEDLIMLPCYHWNRSVIVPKGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S+ +I+ +PL+TY F+GR +LD F+ P IV ++D+IKTYV L +GI
Sbjct: 181 VGKLSIADIARFPLVTYVFGFTGRSELDLAFNRAGFEPNIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A D D +L ++ ASHLF + +++ ++G++LR+Y+Y F+ +P L R +
Sbjct: 241 GVMATMALDQQVDTDLVALDASHLFAHSTTKIGFRKGSFLRTYMYDFMTRFAPHLTRDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAI 304
>gi|117619914|ref|YP_856341.1| transcriptional regulator CysB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|411009668|ref|ZP_11385997.1| transcriptional regulator CysB [Aeromonas aquariorum AAK1]
gi|117561321|gb|ABK38269.1| HTH-type transcriptional regulator CysB [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 324
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 191/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVANHRLNVSATAESLYTSQPGISKQVRMLEDELGIQIFERSGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +++ I+ ++E +K + + + + G L IATTHTQARYALP +IK F +FP
Sbjct: 61 PAGRDVIKIANEILGKVESIKSVASQHTHPEQGTLHIATTHTQARYALPDVIKGFIKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E + QAD AI TE L + LI +PCY W +IVP HPL
Sbjct: 121 KVSLHMHQGTPTQISEAVVKGQADFAIATEALHLYEDLIMLPCYHWNRSVIVPKGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S+ +I+ +PL+TY F+GR +LD F+ P IV ++D+IKTYV L +GI
Sbjct: 181 VGKLSIADIARFPLVTYVFGFTGRSELDTAFNRAGFEPNIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A D D +L ++ ASHLF + +++ ++G++LR+Y+Y F+ +P L R +
Sbjct: 241 GVMATMALDPQVDTDLVALDASHLFAHSTTKIGFRKGSFLRTYMYDFMTRFAPHLTRDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAI 304
>gi|300921761|ref|ZP_07137926.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
182-1]
gi|331677864|ref|ZP_08378539.1| cys regulon transcriptional regulator Cbl [Escherichia coli H591]
gi|387607676|ref|YP_006096532.1| LysR family transcriptional regulator [Escherichia coli 042]
gi|422956633|ref|ZP_16969107.1| HTH-type transcriptional regulator cbl [Escherichia coli H494]
gi|423705958|ref|ZP_17680341.1| HTH-type transcriptional regulator cbl [Escherichia coli B799]
gi|432518052|ref|ZP_19755244.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE228]
gi|432543555|ref|ZP_19780402.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE236]
gi|432549045|ref|ZP_19785817.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE237]
gi|432631727|ref|ZP_19867656.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE80]
gi|432770950|ref|ZP_20005294.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE50]
gi|432806088|ref|ZP_20040026.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE91]
gi|432934753|ref|ZP_20134190.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE184]
gi|432962004|ref|ZP_20151794.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE202]
gi|433063378|ref|ZP_20250311.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE125]
gi|433159016|ref|ZP_20343863.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE177]
gi|433194009|ref|ZP_20378006.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE90]
gi|450217821|ref|ZP_21895718.1| transcriptional regulator Cbl [Escherichia coli O08]
gi|284921976|emb|CBG35052.1| LysR-family transcriptional regulator [Escherichia coli 042]
gi|300421849|gb|EFK05160.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
182-1]
gi|331074324|gb|EGI45644.1| cys regulon transcriptional regulator Cbl [Escherichia coli H591]
gi|371599498|gb|EHN88284.1| HTH-type transcriptional regulator cbl [Escherichia coli H494]
gi|385713350|gb|EIG50286.1| HTH-type transcriptional regulator cbl [Escherichia coli B799]
gi|431052100|gb|ELD61762.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE228]
gi|431074778|gb|ELD82326.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE236]
gi|431080340|gb|ELD87145.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE237]
gi|431171195|gb|ELE71376.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE80]
gi|431316150|gb|ELG04049.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE50]
gi|431355209|gb|ELG41923.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE91]
gi|431452921|gb|ELH33331.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE184]
gi|431474960|gb|ELH54766.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE202]
gi|431583212|gb|ELI55222.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE125]
gi|431679050|gb|ELJ44968.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE177]
gi|431716577|gb|ELJ80685.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE90]
gi|449318349|gb|EMD08422.1| transcriptional regulator Cbl [Escherichia coli O08]
Length = 316
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417618556|ref|ZP_12268972.1| HTH-type transcriptional regulator cbl [Escherichia coli G58-1]
gi|422772148|ref|ZP_16825836.1| LysR substrate binding domain-containing protein [Escherichia coli
E482]
gi|323940711|gb|EGB36901.1| LysR substrate binding domain-containing protein [Escherichia coli
E482]
gi|345376273|gb|EGX08214.1| HTH-type transcriptional regulator cbl [Escherichia coli G58-1]
Length = 316
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF T + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDTNTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|420258200|ref|ZP_14760939.1| transcriptional regulator CysB-like protein [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404514336|gb|EKA28132.1| transcriptional regulator CysB-like protein [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 318
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 203/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLAVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLQSGEADIGIATEVLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 EPHITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|238763034|ref|ZP_04624001.1| HTH-type transcriptional regulator cbl [Yersinia kristensenii ATCC
33638]
gi|238698792|gb|EEP91542.1| HTH-type transcriptional regulator cbl [Yersinia kristensenii ATCC
33638]
Length = 318
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 204/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLTVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLQSGEADIGIATELLMSDESVAVFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 ESNITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|157961363|ref|YP_001501397.1| transcriptional regulator CysB [Shewanella pealeana ATCC 700345]
gi|157846363|gb|ABV86862.1| transcriptional regulator, LysR family [Shewanella pealeana ATCC
700345]
Length = 324
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNYNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPHIIQGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEAMHLYSDLIMLPCYHWNRSIVVTRDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSNISIEDLARFPLVTYVFGFDRASEIEKSFNRAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D + DK+L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L R +
Sbjct: 241 GVIASMAIDEHMDKDLVAIDASHLFAHSTTKIGFRKGNFLRTYMYDFIEHFAPHLTRPVV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|392554423|ref|ZP_10301560.1| transcriptional regulator CysB [Pseudoalteromonas undina NCIMB
2128]
Length = 325
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++L+TSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVQNHKLNVSATAESLFTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++EG+K + E + D G L IATTHTQARYALP +I+ FT ++P
Sbjct: 61 GAGEEIINISREILSKVEGIKAVANEHTLPDQGKLNIATTHTQARYALPSVIQGFTQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
V L + QG P+QI++ AD AI TE L L+ +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLVMLPCYHWNRSIVVAKDHPLAK 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++++++ +I+ YPLITY F+GR +LD+ F+ L P+IV ++D+IKTYV L +G
Sbjct: 181 KVDNLTVADIAQYPLITYVFGFTGRSELDKAFNAYGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++AS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L ++
Sbjct: 241 VGVVASMAIDQVNDNDLVCIDASHLFEASTTKIGFRKGSFLRTYMYDFIERFAPHLTKER 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|163751446|ref|ZP_02158670.1| transcriptional regulator for cysteine regulon [Shewanella benthica
KT99]
gi|161328660|gb|EDP99809.1| transcriptional regulator for cysteine regulon [Shewanella benthica
KT99]
Length = 324
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALPKII+ F +FP
Sbjct: 61 PAGEKVISIANNILGKVESIKKVAEEYTKPDEGELNIATTDTQARYALPKIIRGFIDRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGAADFAIATEGMHLYSDLIMLPCYHWNRSIVVNRDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++I+++++ +PL+TY F ++++ F L P +V ++D++KTYV L +G+
Sbjct: 181 RSNITIEDLGRFPLVTYVFGFDRESEIEKSFKHAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASHLFG + +++ ++G +LR+Y+Y FI+ +P L ++ +
Sbjct: 241 GVIASMAIDPIMDKDLVAIDASHLFGHSTTKIGFRKGNFLRTYMYEFIERFAPHLTKEVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|416897924|ref|ZP_11927572.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_7v]
gi|417115667|ref|ZP_11966803.1| cys regulon transcriptional regulator Cbl [Escherichia coli 1.2741]
gi|422781113|ref|ZP_16833898.1| LysR substrate binding domain-containing protein [Escherichia coli
TW10509]
gi|422799275|ref|ZP_16847774.1| LysR substrate binding domain-containing protein [Escherichia coli
M863]
gi|323968275|gb|EGB63683.1| LysR substrate binding domain-containing protein [Escherichia coli
M863]
gi|323977831|gb|EGB72917.1| LysR substrate binding domain-containing protein [Escherichia coli
TW10509]
gi|327253126|gb|EGE64780.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_7v]
gi|386141086|gb|EIG82238.1| cys regulon transcriptional regulator Cbl [Escherichia coli 1.2741]
Length = 316
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 IIPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|419942093|ref|ZP_14458736.1| transcriptional regulator Cbl [Escherichia coli 75]
gi|432737488|ref|ZP_19972251.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE42]
gi|388398708|gb|EIL59538.1| transcriptional regulator Cbl [Escherichia coli 75]
gi|431282935|gb|ELF73804.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE42]
Length = 316
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 200/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + ++NL + HLF T + +K+G R+YV+ F++L + L+
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDTNTVWLGLKRGQLQRNYVWRFLELCNAGLS 296
>gi|432680569|ref|ZP_19915946.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE143]
gi|431221499|gb|ELF18820.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE143]
Length = 316
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +S +IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSAVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|91793450|ref|YP_563101.1| transcriptional regulator CysB [Shewanella denitrificans OS217]
gi|91715452|gb|ABE55378.1| transcriptional regulator, LysR family [Shewanella denitrificans
OS217]
Length = 324
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E + + G L IATT TQARYALPK+I+ F ++P
Sbjct: 61 PAGQQVIDIANDILGKVESIKKVSEEHTKPNQGELNIATTDTQARYALPKVIQNFIHRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E +AD AI TE + LI +PCY W ++V DHPL
Sbjct: 121 KVNLHMHQGTPAQISEQAARGEADFAIATEAMHLYTDLIMLPCYHWNRSVVVTRDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS+++++ +PL+TY F +++R F L+P +V ++D++KTYV L +G+
Sbjct: 181 VKKISIEDLARFPLVTYVFGFDKASEIERSFKRANLSPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASHLF + +++ ++G++LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAIDPVIDKDLVTIDASHLFAHSTTKIGFRRGSFLRSYMYDFIFHFAPHLTRDVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|415874676|ref|ZP_11541609.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
79-10]
gi|417265828|ref|ZP_12053197.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.3884]
gi|342929878|gb|EGU98600.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
79-10]
gi|386231821|gb|EII59168.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.3884]
Length = 327
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 12 VNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 71
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 72 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 131
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 132 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 191
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 192 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 251
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 252 GLVAEQSSGAQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 311
Query: 301 NK 302
+
Sbjct: 312 KR 313
>gi|126174707|ref|YP_001050856.1| transcriptional regulator CysB [Shewanella baltica OS155]
gi|153001006|ref|YP_001366687.1| transcriptional regulator CysB [Shewanella baltica OS185]
gi|160875719|ref|YP_001555035.1| transcriptional regulator CysB [Shewanella baltica OS195]
gi|217973034|ref|YP_002357785.1| transcriptional regulator CysB [Shewanella baltica OS223]
gi|373949824|ref|ZP_09609785.1| transcriptional regulator, LysR family [Shewanella baltica OS183]
gi|378708919|ref|YP_005273813.1| LysR family transcriptional regulator [Shewanella baltica OS678]
gi|386324343|ref|YP_006020460.1| LysR family transcriptional regulator [Shewanella baltica BA175]
gi|386341464|ref|YP_006037830.1| LysR family transcriptional regulator [Shewanella baltica OS117]
gi|418024711|ref|ZP_12663693.1| transcriptional regulator, LysR family [Shewanella baltica OS625]
gi|125997912|gb|ABN61987.1| transcriptional regulator, LysR family [Shewanella baltica OS155]
gi|151365624|gb|ABS08624.1| transcriptional regulator, LysR family [Shewanella baltica OS185]
gi|160861241|gb|ABX49775.1| transcriptional regulator, LysR family [Shewanella baltica OS195]
gi|217498169|gb|ACK46362.1| transcriptional regulator, LysR family [Shewanella baltica OS223]
gi|315267908|gb|ADT94761.1| transcriptional regulator, LysR family [Shewanella baltica OS678]
gi|333818488|gb|AEG11154.1| transcriptional regulator, LysR family [Shewanella baltica BA175]
gi|334863865|gb|AEH14336.1| transcriptional regulator, LysR family [Shewanella baltica OS117]
gi|353535997|gb|EHC05557.1| transcriptional regulator, LysR family [Shewanella baltica OS625]
gi|373886424|gb|EHQ15316.1| transcriptional regulator, LysR family [Shewanella baltica OS183]
Length = 327
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 193/305 (63%), Gaps = 3/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +KK+ +E++ D G L I+TT TQARYALP II++F ++P
Sbjct: 61 PAGLQVISIANDILGKVESIKKVSEEYTKPDQGELNISTTDTQARYALPTIIRQFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W I+VP DHPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSIVVPKDHPLAT 180
Query: 181 L---NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELR 237
N IS+++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L
Sbjct: 181 RSPNNLISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLG 240
Query: 238 MGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
+G+G+IAS+A D N DK+L +I A HLF + +++ ++G++LRSY+Y FI+ +P L R
Sbjct: 241 LGVGVIASMAIDPNVDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTR 300
Query: 298 KFINK 302
+ K
Sbjct: 301 DVVEK 305
>gi|420372947|ref|ZP_14873145.1| HTH-type transcriptional regulator cbl [Shigella flexneri 1235-66]
gi|391317863|gb|EIQ75113.1| HTH-type transcriptional regulator cbl [Shigella flexneri 1235-66]
Length = 316
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W++ ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWQHSLLVPHDHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 181 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLVPDIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + L + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSVEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|301327783|ref|ZP_07220981.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
78-1]
gi|432691931|ref|ZP_19927162.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE161]
gi|450189939|ref|ZP_21890698.1| transcriptional regulator Cbl [Escherichia coli SEPT362]
gi|300845676|gb|EFK73436.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
78-1]
gi|431227406|gb|ELF24543.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE161]
gi|449321020|gb|EMD11038.1| transcriptional regulator Cbl [Escherichia coli SEPT362]
Length = 316
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLGLIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L I+L +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|315634120|ref|ZP_07889409.1| HTH-type transcriptional regulator CysB [Aggregatibacter segnis
ATCC 33393]
gi|315477370|gb|EFU68113.1| HTH-type transcriptional regulator CysB [Aggregatibacter segnis
ATCC 33393]
Length = 323
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R++ E QN N+TEAA L+TSQPG+SK + LE EL ++IF R+GK I+GLT
Sbjct: 1 MKFQQLRYIVEVANQNMNITEAAHVLFTSQPGISKQVRLLENELGVEIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ I+ IM +++G++ + E++ + G L IATT+TQARY LP ++++F+ ++P
Sbjct: 61 PPGKKIVAISREIMMKMQGIRSVADEYTKPEQGVLRIATTNTQARYMLPAVVEKFSQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + +D+ D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 NVSLHIHQGSPTQIYDALMSDEVDLAITTEAQYLFDDVVLLPCYFWNRSVIVKPDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++DIIKTYV + +G+
Sbjct: 181 CEHLTIEELGKYPLITYTFGFTGASDLDYAFNSAGILPNIVFTATDADIIKTYVRMGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A S DK+L +I A HLF +++++ K G +LR+Y+Y FI SP L R +
Sbjct: 241 GIMASMAHTS-ADKDLVAIKADHLFRPSMTQIAFKNGAFLRNYMYDFINYFSPHLTRTNV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|15802469|ref|NP_288495.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EDL933]
gi|15832037|ref|NP_310810.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str. Sakai]
gi|168759129|ref|ZP_02784136.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4401]
gi|168770297|ref|ZP_02795304.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4486]
gi|168784071|ref|ZP_02809078.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4076]
gi|208810517|ref|ZP_03252393.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4206]
gi|208816813|ref|ZP_03257933.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4045]
gi|208820414|ref|ZP_03260734.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4042]
gi|209396344|ref|YP_002271153.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4115]
gi|217329499|ref|ZP_03445578.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
TW14588]
gi|218558846|ref|YP_002391759.1| transcriptional regulator Cbl [Escherichia coli S88]
gi|254793689|ref|YP_003078526.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
TW14359]
gi|261226498|ref|ZP_05940779.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli O157:H7 str. FRIK2000]
gi|261254695|ref|ZP_05947228.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli O157:H7 str. FRIK966]
gi|291283216|ref|YP_003500034.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str. CB9615]
gi|386281045|ref|ZP_10058709.1| HTH-type transcriptional regulator cbl [Escherichia sp. 4_1_40B]
gi|387507282|ref|YP_006159538.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str.
RM12579]
gi|387883134|ref|YP_006313436.1| transcriptional regulator Cbl [Escherichia coli Xuzhou21]
gi|404375351|ref|ZP_10980536.1| HTH-type transcriptional regulator cbl [Escherichia sp. 1_1_43]
gi|416313863|ref|ZP_11658430.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. 1044]
gi|416321323|ref|ZP_11663378.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. EC1212]
gi|416324964|ref|ZP_11665522.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. 1125]
gi|416774779|ref|ZP_11874113.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str. G5101]
gi|416786435|ref|ZP_11879014.1| transcriptional regulator Cbl [Escherichia coli O157:H- str.
493-89]
gi|416797848|ref|ZP_11883936.1| transcriptional regulator Cbl [Escherichia coli O157:H- str. H
2687]
gi|416808867|ref|ZP_11888599.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str.
3256-97]
gi|416819289|ref|ZP_11893155.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str. USDA
5905]
gi|416829769|ref|ZP_11898466.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
LSU-61]
gi|417085012|ref|ZP_11952606.1| transcriptional regulator Cbl [Escherichia coli cloneA_i1]
gi|419045860|ref|ZP_13592802.1| cbl transcriptional activator [Escherichia coli DEC3A]
gi|419051606|ref|ZP_13598485.1| cbl transcriptional activator [Escherichia coli DEC3B]
gi|419057613|ref|ZP_13604424.1| cbl transcriptional activator [Escherichia coli DEC3C]
gi|419063028|ref|ZP_13609764.1| cbl transcriptional activator [Escherichia coli DEC3D]
gi|419069909|ref|ZP_13615540.1| cbl transcriptional activator [Escherichia coli DEC3E]
gi|419075988|ref|ZP_13621514.1| cbl transcriptional activator [Escherichia coli DEC3F]
gi|419081126|ref|ZP_13626579.1| cbl transcriptional activator [Escherichia coli DEC4A]
gi|419086777|ref|ZP_13632144.1| cbl transcriptional activator [Escherichia coli DEC4B]
gi|419092935|ref|ZP_13638225.1| cbl transcriptional activator [Escherichia coli DEC4C]
gi|419098650|ref|ZP_13643857.1| cbl transcriptional activator [Escherichia coli DEC4D]
gi|419104390|ref|ZP_13649526.1| cbl transcriptional activator [Escherichia coli DEC4E]
gi|419109953|ref|ZP_13655015.1| cbl transcriptional activator [Escherichia coli DEC4F]
gi|419115269|ref|ZP_13660288.1| cbl transcriptional activator [Escherichia coli DEC5A]
gi|419120919|ref|ZP_13665880.1| cbl transcriptional activator [Escherichia coli DEC5B]
gi|419126412|ref|ZP_13671300.1| cbl transcriptional activator [Escherichia coli DEC5C]
gi|419131957|ref|ZP_13676797.1| cbl transcriptional activator [Escherichia coli DEC5D]
gi|419136894|ref|ZP_13681692.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC5E]
gi|419916273|ref|ZP_14434586.1| transcriptional regulator Cbl [Escherichia coli KD2]
gi|419946830|ref|ZP_14463214.1| transcriptional regulator Cbl [Escherichia coli HM605]
gi|420269956|ref|ZP_14772324.1| HTH-type transciptional regulator cbl [Escherichia coli PA22]
gi|420274487|ref|ZP_14776808.1| HTH-type transciptional regulator cbl [Escherichia coli PA40]
gi|420281191|ref|ZP_14783430.1| HTH-type transciptional regulator cbl [Escherichia coli TW06591]
gi|420287129|ref|ZP_14789325.1| HTH-type transciptional regulator cbl [Escherichia coli TW10246]
gi|420292796|ref|ZP_14794926.1| HTH-type transciptional regulator cbl [Escherichia coli TW11039]
gi|420298627|ref|ZP_14800683.1| HTH-type transciptional regulator cbl [Escherichia coli TW09109]
gi|420304471|ref|ZP_14806476.1| HTH-type transciptional regulator cbl [Escherichia coli TW10119]
gi|420310064|ref|ZP_14812003.1| HTH-type transciptional regulator cbl [Escherichia coli EC1738]
gi|420315668|ref|ZP_14817547.1| HTH-type transciptional regulator cbl [Escherichia coli EC1734]
gi|421812692|ref|ZP_16248434.1| HTH-type transciptional regulator cbl [Escherichia coli 8.0416]
gi|421818752|ref|ZP_16254257.1| HTH-type transcriptional regulator cbl [Escherichia coli 10.0821]
gi|421824349|ref|ZP_16259737.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK920]
gi|421831366|ref|ZP_16266659.1| HTH-type transciptional regulator cbl [Escherichia coli PA7]
gi|422749207|ref|ZP_16803119.1| LysR substrate binding domain-containing protein [Escherichia coli
H252]
gi|422829389|ref|ZP_16877556.1| HTH-type transcriptional regulator cbl [Escherichia coli B093]
gi|423714506|ref|ZP_17688762.1| HTH-type transciptional regulator cbl [Escherichia coli PA31]
gi|424077909|ref|ZP_17814945.1| HTH-type transciptional regulator cbl [Escherichia coli FDA505]
gi|424084282|ref|ZP_17820827.1| HTH-type transciptional regulator cbl [Escherichia coli FDA517]
gi|424090719|ref|ZP_17826721.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1996]
gi|424097234|ref|ZP_17832632.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1985]
gi|424103551|ref|ZP_17838406.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1990]
gi|424110306|ref|ZP_17844605.1| HTH-type transciptional regulator cbl [Escherichia coli 93-001]
gi|424116001|ref|ZP_17849915.1| HTH-type transciptional regulator cbl [Escherichia coli PA3]
gi|424122405|ref|ZP_17855798.1| HTH-type transciptional regulator cbl [Escherichia coli PA5]
gi|424128545|ref|ZP_17861489.1| HTH-type transciptional regulator cbl [Escherichia coli PA9]
gi|424134703|ref|ZP_17867227.1| HTH-type transciptional regulator cbl [Escherichia coli PA10]
gi|424141332|ref|ZP_17873290.1| HTH-type transciptional regulator cbl [Escherichia coli PA14]
gi|424147757|ref|ZP_17879199.1| HTH-type transciptional regulator cbl [Escherichia coli PA15]
gi|424153701|ref|ZP_17884696.1| HTH-type transciptional regulator cbl [Escherichia coli PA24]
gi|424237443|ref|ZP_17890129.1| HTH-type transciptional regulator cbl [Escherichia coli PA25]
gi|424316053|ref|ZP_17896048.1| HTH-type transciptional regulator cbl [Escherichia coli PA28]
gi|424450154|ref|ZP_17901904.1| HTH-type transciptional regulator cbl [Escherichia coli PA32]
gi|424456284|ref|ZP_17907489.1| HTH-type transciptional regulator cbl [Escherichia coli PA33]
gi|424462581|ref|ZP_17913123.1| HTH-type transciptional regulator cbl [Escherichia coli PA39]
gi|424468974|ref|ZP_17918872.1| HTH-type transciptional regulator cbl [Escherichia coli PA41]
gi|424475579|ref|ZP_17924963.1| HTH-type transciptional regulator cbl [Escherichia coli PA42]
gi|424481320|ref|ZP_17930342.1| HTH-type transciptional regulator cbl [Escherichia coli TW07945]
gi|424487486|ref|ZP_17936094.1| HTH-type transciptional regulator cbl [Escherichia coli TW09098]
gi|424493944|ref|ZP_17941793.1| HTH-type transciptional regulator cbl [Escherichia coli TW09195]
gi|424500746|ref|ZP_17947729.1| HTH-type transciptional regulator cbl [Escherichia coli EC4203]
gi|424506926|ref|ZP_17953416.1| HTH-type transciptional regulator cbl [Escherichia coli EC4196]
gi|424520679|ref|ZP_17964853.1| HTH-type transciptional regulator cbl [Escherichia coli TW14301]
gi|424526595|ref|ZP_17970357.1| HTH-type transciptional regulator cbl [Escherichia coli EC4421]
gi|424532762|ref|ZP_17976146.1| HTH-type transciptional regulator cbl [Escherichia coli EC4422]
gi|424538757|ref|ZP_17981756.1| HTH-type transciptional regulator cbl [Escherichia coli EC4013]
gi|424544701|ref|ZP_17987209.1| HTH-type transciptional regulator cbl [Escherichia coli EC4402]
gi|424550975|ref|ZP_17992906.1| HTH-type transciptional regulator cbl [Escherichia coli EC4439]
gi|424557242|ref|ZP_17998699.1| HTH-type transciptional regulator cbl [Escherichia coli EC4436]
gi|424563578|ref|ZP_18004619.1| HTH-type transciptional regulator cbl [Escherichia coli EC4437]
gi|424569621|ref|ZP_18010259.1| HTH-type transciptional regulator cbl [Escherichia coli EC4448]
gi|424575777|ref|ZP_18015934.1| HTH-type transciptional regulator cbl [Escherichia coli EC1845]
gi|424581658|ref|ZP_18021365.1| HTH-type transciptional regulator cbl [Escherichia coli EC1863]
gi|425098487|ref|ZP_18501264.1| HTH-type transcriptional regulator cbl [Escherichia coli 3.4870]
gi|425104643|ref|ZP_18506989.1| HTH-type transcriptional regulator cbl [Escherichia coli 5.2239]
gi|425110491|ref|ZP_18512473.1| HTH-type transciptional regulator cbl [Escherichia coli 6.0172]
gi|425126293|ref|ZP_18527531.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0586]
gi|425132185|ref|ZP_18533063.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.2524]
gi|425138554|ref|ZP_18539006.1| HTH-type transciptional regulator cbl [Escherichia coli 10.0833]
gi|425144521|ref|ZP_18544561.1| HTH-type transcriptional regulator cbl [Escherichia coli 10.0869]
gi|425150530|ref|ZP_18550193.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.0221]
gi|425156414|ref|ZP_18555718.1| HTH-type transciptional regulator cbl [Escherichia coli PA34]
gi|425162955|ref|ZP_18561868.1| HTH-type transciptional regulator cbl [Escherichia coli FDA506]
gi|425168576|ref|ZP_18567102.1| HTH-type transciptional regulator cbl [Escherichia coli FDA507]
gi|425174671|ref|ZP_18572819.1| HTH-type transciptional regulator cbl [Escherichia coli FDA504]
gi|425180603|ref|ZP_18578366.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1999]
gi|425186871|ref|ZP_18584211.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1997]
gi|425193716|ref|ZP_18590540.1| HTH-type transciptional regulator cbl [Escherichia coli NE1487]
gi|425200074|ref|ZP_18596373.1| HTH-type transciptional regulator cbl [Escherichia coli NE037]
gi|425206548|ref|ZP_18602408.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK2001]
gi|425212296|ref|ZP_18607759.1| HTH-type transciptional regulator cbl [Escherichia coli PA4]
gi|425218415|ref|ZP_18613442.1| HTH-type transciptional regulator cbl [Escherichia coli PA23]
gi|425224933|ref|ZP_18619476.1| HTH-type transciptional regulator cbl [Escherichia coli PA49]
gi|425231228|ref|ZP_18625332.1| HTH-type transciptional regulator cbl [Escherichia coli PA45]
gi|425237317|ref|ZP_18631057.1| HTH-type transciptional regulator cbl [Escherichia coli TT12B]
gi|425243407|ref|ZP_18636769.1| HTH-type transciptional regulator cbl [Escherichia coli MA6]
gi|425249531|ref|ZP_18642511.1| HTH-type transciptional regulator cbl [Escherichia coli 5905]
gi|425255309|ref|ZP_18647883.1| HTH-type transciptional regulator cbl [Escherichia coli CB7326]
gi|425261612|ref|ZP_18653681.1| HTH-type transciptional regulator cbl [Escherichia coli EC96038]
gi|425267703|ref|ZP_18659367.1| HTH-type transciptional regulator cbl [Escherichia coli 5412]
gi|425295087|ref|ZP_18685350.1| HTH-type transciptional regulator cbl [Escherichia coli PA38]
gi|425311783|ref|ZP_18701005.1| HTH-type transciptional regulator cbl [Escherichia coli EC1735]
gi|425317738|ref|ZP_18706568.1| HTH-type transciptional regulator cbl [Escherichia coli EC1736]
gi|425323831|ref|ZP_18712242.1| HTH-type transciptional regulator cbl [Escherichia coli EC1737]
gi|425330000|ref|ZP_18717947.1| HTH-type transciptional regulator cbl [Escherichia coli EC1846]
gi|425336146|ref|ZP_18723617.1| HTH-type transciptional regulator cbl [Escherichia coli EC1847]
gi|425342588|ref|ZP_18729548.1| HTH-type transciptional regulator cbl [Escherichia coli EC1848]
gi|425348389|ref|ZP_18734942.1| HTH-type transciptional regulator cbl [Escherichia coli EC1849]
gi|425354695|ref|ZP_18740823.1| HTH-type transciptional regulator cbl [Escherichia coli EC1850]
gi|425360644|ref|ZP_18746361.1| HTH-type transciptional regulator cbl [Escherichia coli EC1856]
gi|425366796|ref|ZP_18752059.1| HTH-type transciptional regulator cbl [Escherichia coli EC1862]
gi|425373210|ref|ZP_18757928.1| HTH-type transciptional regulator cbl [Escherichia coli EC1864]
gi|425386037|ref|ZP_18769664.1| HTH-type transciptional regulator cbl [Escherichia coli EC1866]
gi|425392727|ref|ZP_18775906.1| HTH-type transciptional regulator cbl [Escherichia coli EC1868]
gi|425398875|ref|ZP_18781647.1| HTH-type transciptional regulator cbl [Escherichia coli EC1869]
gi|425404924|ref|ZP_18787234.1| HTH-type transciptional regulator cbl [Escherichia coli EC1870]
gi|425411478|ref|ZP_18793303.1| HTH-type transciptional regulator cbl [Escherichia coli NE098]
gi|425417762|ref|ZP_18799090.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK523]
gi|425429063|ref|ZP_18809734.1| HTH-type transciptional regulator cbl [Escherichia coli 0.1304]
gi|428947416|ref|ZP_19019768.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.1467]
gi|428953638|ref|ZP_19025468.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.1042]
gi|428959559|ref|ZP_19030915.1| HTH-type transcriptional regulator cbl [Escherichia coli 89.0511]
gi|428966007|ref|ZP_19036846.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.0091]
gi|428971829|ref|ZP_19042221.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.0039]
gi|428978458|ref|ZP_19048320.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.2281]
gi|428984226|ref|ZP_19053656.1| HTH-type transcriptional regulator cbl [Escherichia coli 93.0055]
gi|428990374|ref|ZP_19059402.1| HTH-type transcriptional regulator cbl [Escherichia coli 93.0056]
gi|428996145|ref|ZP_19064811.1| HTH-type transcriptional regulator cbl [Escherichia coli 94.0618]
gi|429002313|ref|ZP_19070509.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0183]
gi|429008506|ref|ZP_19076084.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.1288]
gi|429015009|ref|ZP_19081955.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0943]
gi|429020921|ref|ZP_19087474.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0428]
gi|429026922|ref|ZP_19092997.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0427]
gi|429032992|ref|ZP_19098578.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0939]
gi|429039141|ref|ZP_19104308.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0932]
gi|429045171|ref|ZP_19109917.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0107]
gi|429050581|ref|ZP_19115173.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0003]
gi|429055848|ref|ZP_19120223.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.1742]
gi|429061478|ref|ZP_19125535.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0007]
gi|429067597|ref|ZP_19131125.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0672]
gi|429073574|ref|ZP_19136857.1| HTH-type transciptional regulator cbl [Escherichia coli 99.0678]
gi|429078879|ref|ZP_19142036.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0713]
gi|429826829|ref|ZP_19357943.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0109]
gi|429833119|ref|ZP_19363577.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0010]
gi|432363001|ref|ZP_19606170.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE5]
gi|432597963|ref|ZP_19834239.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE62]
gi|432622185|ref|ZP_19858219.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE76]
gi|432815685|ref|ZP_20049470.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE115]
gi|433005432|ref|ZP_20193862.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE227]
gi|433154051|ref|ZP_20339005.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE176]
gi|444925295|ref|ZP_21244670.1| HTH-type transcriptional regulator cbl [Escherichia coli
09BKT078844]
gi|444931112|ref|ZP_21250189.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0814]
gi|444936400|ref|ZP_21255224.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0815]
gi|444942072|ref|ZP_21260631.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0816]
gi|444947650|ref|ZP_21265993.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0839]
gi|444952702|ref|ZP_21270850.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0848]
gi|444958733|ref|ZP_21276622.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1753]
gi|444963930|ref|ZP_21281581.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1775]
gi|444975121|ref|ZP_21292288.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1805]
gi|444980578|ref|ZP_21297514.1| HTH-type transcriptional regulator cbl [Escherichia coli ATCC
700728]
gi|444985945|ref|ZP_21302751.1| HTH-type transcriptional regulator cbl [Escherichia coli PA11]
gi|444991223|ref|ZP_21307897.1| HTH-type transcriptional regulator cbl [Escherichia coli PA19]
gi|444996459|ref|ZP_21312987.1| HTH-type transcriptional regulator cbl [Escherichia coli PA13]
gi|445002065|ref|ZP_21318477.1| HTH-type transcriptional regulator cbl [Escherichia coli PA2]
gi|445007576|ref|ZP_21323848.1| HTH-type transcriptional regulator cbl [Escherichia coli PA47]
gi|445012669|ref|ZP_21328800.1| HTH-type transcriptional regulator cbl [Escherichia coli PA48]
gi|445018370|ref|ZP_21334358.1| HTH-type transcriptional regulator cbl [Escherichia coli PA8]
gi|445024058|ref|ZP_21339908.1| HTH-type transcriptional regulator cbl [Escherichia coli 7.1982]
gi|445029240|ref|ZP_21344946.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1781]
gi|445040381|ref|ZP_21355783.1| HTH-type transcriptional regulator cbl [Escherichia coli PA35]
gi|445051167|ref|ZP_21366252.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0083]
gi|445056960|ref|ZP_21371841.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0670]
gi|452971004|ref|ZP_21969231.1| CysB family transcriptional regulator [Escherichia coli O157:H7
str. EC4009]
gi|12516162|gb|AAG57049.1|AE005424_7 transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Escherichia coli O157:H7 str. EDL933]
gi|13362251|dbj|BAB36206.1| transcriptional regulator cys regulon [Escherichia coli O157:H7
str. Sakai]
gi|188998698|gb|EDU67684.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4076]
gi|189354244|gb|EDU72663.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4401]
gi|189360829|gb|EDU79248.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4486]
gi|208725033|gb|EDZ74740.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4206]
gi|208731156|gb|EDZ79845.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4045]
gi|208740537|gb|EDZ88219.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4042]
gi|209157744|gb|ACI35177.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
EC4115]
gi|209748338|gb|ACI72476.1| transcriptional regulator cys regulon [Escherichia coli]
gi|209748340|gb|ACI72477.1| transcriptional regulator cys regulon [Escherichia coli]
gi|209748342|gb|ACI72478.1| transcriptional regulator cys regulon [Escherichia coli]
gi|217317267|gb|EEC25696.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
TW14588]
gi|218365615|emb|CAR03346.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli S88]
gi|254593089|gb|ACT72450.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli O157:H7 str. TW14359]
gi|290763089|gb|ADD57050.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str. CB9615]
gi|320189637|gb|EFW64294.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. EC1212]
gi|320641445|gb|EFX10883.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str. G5101]
gi|320646817|gb|EFX15689.1| transcriptional regulator Cbl [Escherichia coli O157:H- str.
493-89]
gi|320652094|gb|EFX20433.1| transcriptional regulator Cbl [Escherichia coli O157:H- str. H
2687]
gi|320657689|gb|EFX25481.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320663372|gb|EFX30672.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str. USDA
5905]
gi|320668180|gb|EFX35043.1| transcriptional regulator Cbl [Escherichia coli O157:H7 str.
LSU-61]
gi|323952483|gb|EGB48356.1| LysR substrate binding domain-containing protein [Escherichia coli
H252]
gi|326340067|gb|EGD63872.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. 1044]
gi|326346474|gb|EGD70210.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O157:H7 str. 1125]
gi|355351594|gb|EHG00782.1| transcriptional regulator Cbl [Escherichia coli cloneA_i1]
gi|371610122|gb|EHN98654.1| HTH-type transcriptional regulator cbl [Escherichia coli B093]
gi|374359276|gb|AEZ40983.1| transcriptional regulator Cbl [Escherichia coli O55:H7 str.
RM12579]
gi|377894179|gb|EHU58603.1| cbl transcriptional activator [Escherichia coli DEC3A]
gi|377894635|gb|EHU59053.1| cbl transcriptional activator [Escherichia coli DEC3B]
gi|377905697|gb|EHU69957.1| cbl transcriptional activator [Escherichia coli DEC3C]
gi|377911148|gb|EHU75324.1| cbl transcriptional activator [Escherichia coli DEC3D]
gi|377913437|gb|EHU77575.1| cbl transcriptional activator [Escherichia coli DEC3E]
gi|377922606|gb|EHU86591.1| cbl transcriptional activator [Escherichia coli DEC3F]
gi|377927196|gb|EHU91117.1| cbl transcriptional activator [Escherichia coli DEC4A]
gi|377932034|gb|EHU95890.1| cbl transcriptional activator [Escherichia coli DEC4B]
gi|377943125|gb|EHV06847.1| cbl transcriptional activator [Escherichia coli DEC4C]
gi|377943442|gb|EHV07157.1| cbl transcriptional activator [Escherichia coli DEC4D]
gi|377948675|gb|EHV12322.1| cbl transcriptional activator [Escherichia coli DEC4E]
gi|377957874|gb|EHV21399.1| cbl transcriptional activator [Escherichia coli DEC4F]
gi|377961064|gb|EHV24538.1| cbl transcriptional activator [Escherichia coli DEC5A]
gi|377967894|gb|EHV31294.1| cbl transcriptional activator [Escherichia coli DEC5B]
gi|377975803|gb|EHV39119.1| cbl transcriptional activator [Escherichia coli DEC5C]
gi|377976480|gb|EHV39789.1| cbl transcriptional activator [Escherichia coli DEC5D]
gi|377984780|gb|EHV48008.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC5E]
gi|386122228|gb|EIG70841.1| HTH-type transcriptional regulator cbl [Escherichia sp. 4_1_40B]
gi|386796592|gb|AFJ29626.1| transcriptional regulator Cbl [Escherichia coli Xuzhou21]
gi|388396343|gb|EIL57454.1| transcriptional regulator Cbl [Escherichia coli KD2]
gi|388412124|gb|EIL72229.1| transcriptional regulator Cbl [Escherichia coli HM605]
gi|390644370|gb|EIN23631.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1996]
gi|390644535|gb|EIN23784.1| HTH-type transciptional regulator cbl [Escherichia coli FDA517]
gi|390644985|gb|EIN24172.1| HTH-type transciptional regulator cbl [Escherichia coli FDA505]
gi|390662753|gb|EIN40321.1| HTH-type transciptional regulator cbl [Escherichia coli 93-001]
gi|390664427|gb|EIN41826.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1985]
gi|390665615|gb|EIN42900.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1990]
gi|390679963|gb|EIN55822.1| HTH-type transciptional regulator cbl [Escherichia coli PA3]
gi|390683549|gb|EIN59222.1| HTH-type transciptional regulator cbl [Escherichia coli PA5]
gi|390684988|gb|EIN60574.1| HTH-type transciptional regulator cbl [Escherichia coli PA9]
gi|390700391|gb|EIN74697.1| HTH-type transciptional regulator cbl [Escherichia coli PA10]
gi|390702625|gb|EIN76749.1| HTH-type transciptional regulator cbl [Escherichia coli PA15]
gi|390702895|gb|EIN76955.1| HTH-type transciptional regulator cbl [Escherichia coli PA14]
gi|390714914|gb|EIN87784.1| HTH-type transciptional regulator cbl [Escherichia coli PA22]
gi|390725874|gb|EIN98357.1| HTH-type transciptional regulator cbl [Escherichia coli PA25]
gi|390725876|gb|EIN98358.1| HTH-type transciptional regulator cbl [Escherichia coli PA24]
gi|390729144|gb|EIO01369.1| HTH-type transciptional regulator cbl [Escherichia coli PA28]
gi|390744376|gb|EIO15275.1| HTH-type transciptional regulator cbl [Escherichia coli PA32]
gi|390744683|gb|EIO15526.1| HTH-type transciptional regulator cbl [Escherichia coli PA31]
gi|390746771|gb|EIO17403.1| HTH-type transciptional regulator cbl [Escherichia coli PA33]
gi|390760676|gb|EIO29989.1| HTH-type transciptional regulator cbl [Escherichia coli PA40]
gi|390769228|gb|EIO38170.1| HTH-type transciptional regulator cbl [Escherichia coli PA41]
gi|390770746|gb|EIO39515.1| HTH-type transciptional regulator cbl [Escherichia coli PA39]
gi|390770824|gb|EIO39569.1| HTH-type transciptional regulator cbl [Escherichia coli PA42]
gi|390782023|gb|EIO49692.1| HTH-type transciptional regulator cbl [Escherichia coli TW06591]
gi|390790737|gb|EIO58141.1| HTH-type transciptional regulator cbl [Escherichia coli TW10246]
gi|390793761|gb|EIO61092.1| HTH-type transciptional regulator cbl [Escherichia coli TW07945]
gi|390797812|gb|EIO65040.1| HTH-type transciptional regulator cbl [Escherichia coli TW11039]
gi|390807660|gb|EIO74530.1| HTH-type transciptional regulator cbl [Escherichia coli TW09109]
gi|390808633|gb|EIO75467.1| HTH-type transciptional regulator cbl [Escherichia coli TW09098]
gi|390816564|gb|EIO83043.1| HTH-type transciptional regulator cbl [Escherichia coli TW10119]
gi|390828500|gb|EIO94165.1| HTH-type transciptional regulator cbl [Escherichia coli EC4203]
gi|390831827|gb|EIO97181.1| HTH-type transciptional regulator cbl [Escherichia coli TW09195]
gi|390833290|gb|EIO98364.1| HTH-type transciptional regulator cbl [Escherichia coli EC4196]
gi|390847896|gb|EIP11404.1| HTH-type transciptional regulator cbl [Escherichia coli TW14301]
gi|390851760|gb|EIP15009.1| HTH-type transciptional regulator cbl [Escherichia coli EC4421]
gi|390862354|gb|EIP24544.1| HTH-type transciptional regulator cbl [Escherichia coli EC4422]
gi|390867209|gb|EIP29052.1| HTH-type transciptional regulator cbl [Escherichia coli EC4013]
gi|390873160|gb|EIP34402.1| HTH-type transciptional regulator cbl [Escherichia coli EC4402]
gi|390879947|gb|EIP40668.1| HTH-type transciptional regulator cbl [Escherichia coli EC4439]
gi|390884440|gb|EIP44751.1| HTH-type transciptional regulator cbl [Escherichia coli EC4436]
gi|390895642|gb|EIP55100.1| HTH-type transciptional regulator cbl [Escherichia coli EC4437]
gi|390898962|gb|EIP58222.1| HTH-type transciptional regulator cbl [Escherichia coli EC4448]
gi|390900888|gb|EIP60098.1| HTH-type transciptional regulator cbl [Escherichia coli EC1738]
gi|390908314|gb|EIP67140.1| HTH-type transciptional regulator cbl [Escherichia coli EC1734]
gi|390920601|gb|EIP78864.1| HTH-type transciptional regulator cbl [Escherichia coli EC1863]
gi|390921577|gb|EIP79725.1| HTH-type transciptional regulator cbl [Escherichia coli EC1845]
gi|404291112|gb|EJZ48007.1| HTH-type transcriptional regulator cbl [Escherichia sp. 1_1_43]
gi|408066127|gb|EKH00590.1| HTH-type transciptional regulator cbl [Escherichia coli PA7]
gi|408070180|gb|EKH04551.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK920]
gi|408074154|gb|EKH08442.1| HTH-type transciptional regulator cbl [Escherichia coli PA34]
gi|408080309|gb|EKH14386.1| HTH-type transciptional regulator cbl [Escherichia coli FDA506]
gi|408083573|gb|EKH17400.1| HTH-type transciptional regulator cbl [Escherichia coli FDA507]
gi|408092835|gb|EKH25994.1| HTH-type transciptional regulator cbl [Escherichia coli FDA504]
gi|408098690|gb|EKH31409.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1999]
gi|408105732|gb|EKH37878.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK1997]
gi|408109758|gb|EKH41629.1| HTH-type transciptional regulator cbl [Escherichia coli NE1487]
gi|408117082|gb|EKH48324.1| HTH-type transciptional regulator cbl [Escherichia coli NE037]
gi|408123256|gb|EKH54052.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK2001]
gi|408128595|gb|EKH58891.1| HTH-type transciptional regulator cbl [Escherichia coli PA4]
gi|408140043|gb|EKH69588.1| HTH-type transciptional regulator cbl [Escherichia coli PA23]
gi|408142084|gb|EKH71476.1| HTH-type transciptional regulator cbl [Escherichia coli PA49]
gi|408147232|gb|EKH76217.1| HTH-type transciptional regulator cbl [Escherichia coli PA45]
gi|408155762|gb|EKH84025.1| HTH-type transciptional regulator cbl [Escherichia coli TT12B]
gi|408161738|gb|EKH89670.1| HTH-type transciptional regulator cbl [Escherichia coli MA6]
gi|408164934|gb|EKH92675.1| HTH-type transciptional regulator cbl [Escherichia coli 5905]
gi|408175975|gb|EKI02866.1| HTH-type transciptional regulator cbl [Escherichia coli CB7326]
gi|408182686|gb|EKI09171.1| HTH-type transciptional regulator cbl [Escherichia coli EC96038]
gi|408183897|gb|EKI10307.1| HTH-type transciptional regulator cbl [Escherichia coli 5412]
gi|408219623|gb|EKI43742.1| HTH-type transciptional regulator cbl [Escherichia coli PA38]
gi|408228943|gb|EKI52442.1| HTH-type transciptional regulator cbl [Escherichia coli EC1735]
gi|408239983|gb|EKI62704.1| HTH-type transciptional regulator cbl [Escherichia coli EC1736]
gi|408243997|gb|EKI66473.1| HTH-type transciptional regulator cbl [Escherichia coli EC1737]
gi|408248626|gb|EKI70638.1| HTH-type transciptional regulator cbl [Escherichia coli EC1846]
gi|408259170|gb|EKI80365.1| HTH-type transciptional regulator cbl [Escherichia coli EC1847]
gi|408261176|gb|EKI82192.1| HTH-type transciptional regulator cbl [Escherichia coli EC1848]
gi|408266781|gb|EKI87294.1| HTH-type transciptional regulator cbl [Escherichia coli EC1849]
gi|408276950|gb|EKI96811.1| HTH-type transciptional regulator cbl [Escherichia coli EC1850]
gi|408279213|gb|EKI98864.1| HTH-type transciptional regulator cbl [Escherichia coli EC1856]
gi|408290754|gb|EKJ09452.1| HTH-type transciptional regulator cbl [Escherichia coli EC1862]
gi|408292905|gb|EKJ11386.1| HTH-type transciptional regulator cbl [Escherichia coli EC1864]
gi|408309889|gb|EKJ26995.1| HTH-type transciptional regulator cbl [Escherichia coli EC1868]
gi|408309951|gb|EKJ27043.1| HTH-type transciptional regulator cbl [Escherichia coli EC1866]
gi|408321719|gb|EKJ37733.1| HTH-type transciptional regulator cbl [Escherichia coli EC1869]
gi|408327666|gb|EKJ43337.1| HTH-type transciptional regulator cbl [Escherichia coli NE098]
gi|408327975|gb|EKJ43599.1| HTH-type transciptional regulator cbl [Escherichia coli EC1870]
gi|408338156|gb|EKJ52815.1| HTH-type transciptional regulator cbl [Escherichia coli FRIK523]
gi|408347810|gb|EKJ61957.1| HTH-type transciptional regulator cbl [Escherichia coli 0.1304]
gi|408551030|gb|EKK28324.1| HTH-type transcriptional regulator cbl [Escherichia coli 5.2239]
gi|408551861|gb|EKK29095.1| HTH-type transcriptional regulator cbl [Escherichia coli 3.4870]
gi|408552426|gb|EKK29609.1| HTH-type transciptional regulator cbl [Escherichia coli 6.0172]
gi|408573082|gb|EKK48942.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0586]
gi|408581950|gb|EKK57233.1| HTH-type transciptional regulator cbl [Escherichia coli 10.0833]
gi|408582013|gb|EKK57282.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.2524]
gi|408593040|gb|EKK67380.1| HTH-type transcriptional regulator cbl [Escherichia coli 10.0869]
gi|408597542|gb|EKK71559.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.0221]
gi|408602107|gb|EKK75848.1| HTH-type transciptional regulator cbl [Escherichia coli 8.0416]
gi|408613279|gb|EKK86590.1| HTH-type transcriptional regulator cbl [Escherichia coli 10.0821]
gi|427206227|gb|EKV76446.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.1042]
gi|427208512|gb|EKV78620.1| HTH-type transcriptional regulator cbl [Escherichia coli 89.0511]
gi|427209993|gb|EKV79947.1| HTH-type transcriptional regulator cbl [Escherichia coli 88.1467]
gi|427225109|gb|EKV93768.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.2281]
gi|427225520|gb|EKV94160.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.0091]
gi|427228702|gb|EKV97093.1| HTH-type transcriptional regulator cbl [Escherichia coli 90.0039]
gi|427243564|gb|EKW10929.1| HTH-type transcriptional regulator cbl [Escherichia coli 93.0056]
gi|427243877|gb|EKW11227.1| HTH-type transcriptional regulator cbl [Escherichia coli 93.0055]
gi|427247146|gb|EKW14245.1| HTH-type transcriptional regulator cbl [Escherichia coli 94.0618]
gi|427262952|gb|EKW28783.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0943]
gi|427263048|gb|EKW28857.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0183]
gi|427265833|gb|EKW31357.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.1288]
gi|427277740|gb|EKW42258.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0428]
gi|427281707|gb|EKW46010.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0427]
gi|427284500|gb|EKW48568.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0939]
gi|427293465|gb|EKW56718.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0932]
gi|427300687|gb|EKW63616.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0107]
gi|427301249|gb|EKW64129.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0003]
gi|427314720|gb|EKW76755.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.1742]
gi|427316888|gb|EKW78808.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0007]
gi|427321558|gb|EKW83243.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0672]
gi|427329801|gb|EKW91108.1| HTH-type transciptional regulator cbl [Escherichia coli 99.0678]
gi|427329896|gb|EKW91190.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0713]
gi|429254752|gb|EKY39125.1| HTH-type transcriptional regulator cbl [Escherichia coli 96.0109]
gi|429256682|gb|EKY40834.1| HTH-type transcriptional regulator cbl [Escherichia coli 97.0010]
gi|430886703|gb|ELC09552.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE5]
gi|431130830|gb|ELE32913.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE62]
gi|431159884|gb|ELE60428.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE76]
gi|431364741|gb|ELG51272.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE115]
gi|431515337|gb|ELH93164.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE227]
gi|431674801|gb|ELJ40951.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE176]
gi|444539444|gb|ELV19203.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0814]
gi|444541653|gb|ELV21114.1| HTH-type transcriptional regulator cbl [Escherichia coli
09BKT078844]
gi|444548467|gb|ELV26891.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0815]
gi|444559019|gb|ELV36271.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0839]
gi|444560279|gb|ELV37448.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0816]
gi|444566582|gb|ELV43393.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0848]
gi|444574549|gb|ELV50835.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1753]
gi|444578859|gb|ELV54883.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1775]
gi|444594880|gb|ELV70028.1| HTH-type transcriptional regulator cbl [Escherichia coli PA11]
gi|444594964|gb|ELV70101.1| HTH-type transcriptional regulator cbl [Escherichia coli ATCC
700728]
gi|444597430|gb|ELV72426.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1805]
gi|444608603|gb|ELV83113.1| HTH-type transcriptional regulator cbl [Escherichia coli PA13]
gi|444608741|gb|ELV83236.1| HTH-type transcriptional regulator cbl [Escherichia coli PA19]
gi|444617066|gb|ELV91194.1| HTH-type transcriptional regulator cbl [Escherichia coli PA2]
gi|444625447|gb|ELV99285.1| HTH-type transcriptional regulator cbl [Escherichia coli PA47]
gi|444625466|gb|ELV99301.1| HTH-type transcriptional regulator cbl [Escherichia coli PA48]
gi|444631055|gb|ELW04669.1| HTH-type transcriptional regulator cbl [Escherichia coli PA8]
gi|444640370|gb|ELW13640.1| HTH-type transcriptional regulator cbl [Escherichia coli 7.1982]
gi|444643612|gb|ELW16755.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1781]
gi|444655717|gb|ELW28271.1| HTH-type transcriptional regulator cbl [Escherichia coli PA35]
gi|444666383|gb|ELW38455.1| HTH-type transcriptional regulator cbl [Escherichia coli 95.0083]
gi|444670595|gb|ELW42474.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.0670]
Length = 316
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L I+L +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|157375974|ref|YP_001474574.1| transcriptional regulator CysB [Shewanella sediminis HAW-EB3]
gi|157318348|gb|ABV37446.1| transcriptional regulator, LysR family [Shewanella sediminis
HAW-EB3]
Length = 324
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGEQVISIANNILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPNIIRGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYSDLIMLPCYHWNRSIVVTRDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++IS++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSNISIEDLGRFPLVTYVFGFDRESEIEKSFNRAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D N D++L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L ++ +
Sbjct: 241 GVIASMAIDPNMDRDLVAIDASHLFAHSTTKIGFRKGNFLRTYMYEFIEHFAPHLTKEVV 300
Query: 301 NKILN 305
K +
Sbjct: 301 EKAVG 305
>gi|94676750|ref|YP_588750.1| transcriptional regulator CysB [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219900|gb|ABF14059.1| cys regulon transcriptional activator CysB [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 324
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 192/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKRVRMLEDELGVQIFARSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L +ATTHTQARYALP+IIK F ++P
Sbjct: 61 SAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPEIIKSFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V HPL
Sbjct: 121 RVSLHMHQGSPSQIAEAVSKGLADFAIATEALHLYDDLVMLPCYHWNRAIVVLPHHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+++E+++YPL+TY F+GR +LD F+ L P I+ ++D+IKTYV + +GI
Sbjct: 181 KTQITIEELASYPLVTYTFGFTGRSELDIAFNHAGLKPRIIFTATDADVIKTYVRMGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A + D +L I+A LF + +++ ++ T+LRSY+Y F++ +P L R+ +
Sbjct: 241 GVIANMAVSAESDHDLVKINADILFPQSTTKIGFRRSTFLRSYMYDFLQRFAPHLTREVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|238797793|ref|ZP_04641286.1| HTH-type transcriptional regulator cbl [Yersinia mollaretii ATCC
43969]
gi|238718321|gb|EEQ10144.1| HTH-type transcriptional regulator cbl [Yersinia mollaretii ATCC
43969]
Length = 340
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 204/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 23 VNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 82
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS+ D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 83 EPGKELLTVAERMLNDANQIRRLADVFSSNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 142
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+ + +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 143 QVKLVISQGNPQEIAAMLHSGEADIGIATELLMSDESIAAFPYYRWHHAIVVPENHPLTQ 202
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 203 EPNITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 262
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 263 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 318
>gi|238792516|ref|ZP_04636149.1| HTH-type transcriptional regulator cbl [Yersinia intermedia ATCC
29909]
gi|238728151|gb|EEQ19672.1| HTH-type transcriptional regulator cbl [Yersinia intermedia ATCC
29909]
Length = 318
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 201/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLTVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+ + +ADI I TE+L + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLHSGEADIGIATELLMSDASVATFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 EPHISLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|423196288|ref|ZP_17182871.1| HTH-type transcriptional regulator CysB [Aeromonas hydrophila SSU]
gi|404632512|gb|EKB29117.1| HTH-type transcriptional regulator CysB [Aeromonas hydrophila SSU]
Length = 324
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 191/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVANHRLNVSATAESLYTSQPGISKQVRMLEDELGIQIFERSGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +++ I+ ++E +K + + + + G L IATTHTQARYALP +IK F +FP
Sbjct: 61 PAGRDVIKIANEILGKVESIKSVASQHTHPEQGTLHIATTHTQARYALPDVIKGFIKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E + QAD AI TE L + LI +PCY W +IVP HPL
Sbjct: 121 KVSLHMHQGTPTQISEAVVKGQADFAIATEALHLYEDLIMLPCYHWNRSVIVPKGHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +S+ +I+ +PL+TY F+GR +LD F+ P IV ++D+IKTYV L +GI
Sbjct: 181 VGKLSIADIARFPLVTYVFGFTGRSELDTAFNRAGFEPNIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A D D +L ++ ASHLF + +++ ++G++LR+Y+Y F+ +P L R +
Sbjct: 241 GVMATMALDPLVDTDLVALDASHLFAHSTTKIGFRKGSFLRTYMYDFMTRFAPHLTRDVV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 ERAI 304
>gi|293446360|ref|ZP_06662782.1| HTH-type transcriptional regulator cbl [Escherichia coli B088]
gi|417154562|ref|ZP_11992691.1| cys regulon transcriptional regulator Cbl [Escherichia coli
96.0497]
gi|417581514|ref|ZP_12232316.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_B2F1]
gi|417667428|ref|ZP_12316973.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_O31]
gi|291323190|gb|EFE62618.1| HTH-type transcriptional regulator cbl [Escherichia coli B088]
gi|345337285|gb|EGW69717.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_B2F1]
gi|386167651|gb|EIH34167.1| cys regulon transcriptional regulator Cbl [Escherichia coli
96.0497]
gi|397784574|gb|EJK95427.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_O31]
Length = 316
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNSEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|283785753|ref|YP_003365618.1| LysR family transcriptional regulator [Citrobacter rodentium
ICC168]
gi|282949207|emb|CBG88816.1| LysR-family transcriptional regulator [Citrobacter rodentium
ICC168]
Length = 316
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 196/295 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVASMLYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFREIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS +L++ P ++W + ++VP +HPL
Sbjct: 121 EVRLELIQGTPQEIASILQNGGADIGIASERLSNDPQLVAFPWFRWHHSLLVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++L+ ++ +PLITY +GR ++D F+ + + P IVL +SD+IKTYV L +GI
Sbjct: 181 LSPLTLESVARWPLITYRQGITGRSRIDEAFARKGIVPDIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
G++A + + L + HLF + +K+G R+YV+ FI+L + L
Sbjct: 241 GLVAEQSSGEREEGGLTRLDTRHLFEANTVWLGLKRGQLQRNYVWRFIELCNAGL 295
>gi|417159652|ref|ZP_11996680.1| cys regulon transcriptional regulator Cbl [Escherichia coli
99.0741]
gi|386175103|gb|EIH47095.1| cys regulon transcriptional regulator Cbl [Escherichia coli
99.0741]
Length = 316
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKMIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRRGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|157145222|ref|YP_001452541.1| transcriptional regulator Cbl [Citrobacter koseri ATCC BAA-895]
gi|157082427|gb|ABV12105.1| hypothetical protein CKO_00956 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 27 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 86
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 87 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFREIFP 146
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 147 EVRLELIQGTPQEIEGLLQNGGADIGIASERLSNDPLLVAFPWFRWHHSLLVPRDHPLVQ 206
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D FS + L P IVL +SD+IKTYV L +GI
Sbjct: 207 TSPLTLEAIAHWPLITYRQGITGRSRIDEAFSRKGLLPDIVLSAQDSDVIKTYVALGLGI 266
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + L + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 267 GLVAEQSSGEQEEGALTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSVEDI 326
Query: 301 NK 302
+
Sbjct: 327 KR 328
>gi|218549292|ref|YP_002383083.1| transcriptional regulator Cbl [Escherichia fergusonii ATCC 35469]
gi|422805162|ref|ZP_16853594.1| LysR substrate binding domain-containing protein [Escherichia
fergusonii B253]
gi|424816687|ref|ZP_18241838.1| transcriptional regulator Cbl [Escherichia fergusonii ECD227]
gi|218356833|emb|CAQ89461.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia fergusonii ATCC 35469]
gi|324114190|gb|EGC08163.1| LysR substrate binding domain-containing protein [Escherichia
fergusonii B253]
gi|325497707|gb|EGC95566.1| transcriptional regulator Cbl [Escherichia fergusonii ECD227]
Length = 316
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 198/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ+FNLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDFNLTEVANMLYTSQSGVSRHIRELEDELGIEIFIRKGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPGVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP +HPL+
Sbjct: 121 EVRLELIQGTPQEIDALLQNGGADIGIASERLSNDPLLVAFPWFRWHHSLLVPNNHPLIA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I+ +PLITY +GR ++D F+ + L +VL +SD+IKTYVEL +GI
Sbjct: 181 ETPLTLEAIAKWPLITYRQGITGRSRIDEAFARKGLIADVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +K L + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSGGEQEEKGLTQLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|123442704|ref|YP_001006681.1| transcriptional regulator CysB-like protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089665|emb|CAL12517.1| putative LysR-family transcriptional regulatory protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 318
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 202/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF +P
Sbjct: 61 EPGKELLAVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLQSGEADIGIATEVLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL MG+
Sbjct: 181 EPHITLETLSTLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|215487202|ref|YP_002329633.1| transcriptional regulator Cbl [Escherichia coli O127:H6 str.
E2348/69]
gi|312967211|ref|ZP_07781427.1| HTH-type transcriptional regulator cbl [Escherichia coli 2362-75]
gi|417756107|ref|ZP_12404185.1| cbl transcriptional activator [Escherichia coli DEC2B]
gi|419002476|ref|ZP_13550008.1| cbl transcriptional activator [Escherichia coli DEC1B]
gi|419008101|ref|ZP_13555536.1| cbl transcriptional activator [Escherichia coli DEC1C]
gi|419013843|ref|ZP_13561197.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC1D]
gi|419018678|ref|ZP_13565988.1| cbl transcriptional activator [Escherichia coli DEC1E]
gi|419024351|ref|ZP_13571579.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC2A]
gi|419029366|ref|ZP_13576536.1| cbl transcriptional activator [Escherichia coli DEC2C]
gi|419035084|ref|ZP_13582172.1| cbl transcriptional activator [Escherichia coli DEC2D]
gi|419040004|ref|ZP_13587038.1| cbl transcriptional activator [Escherichia coli DEC2E]
gi|215265274|emb|CAS09669.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli O127:H6 str. E2348/69]
gi|312288019|gb|EFR15923.1| HTH-type transcriptional regulator cbl [Escherichia coli 2362-75]
gi|377845069|gb|EHU10094.1| cbl transcriptional activator [Escherichia coli DEC1C]
gi|377848546|gb|EHU13529.1| cbl transcriptional activator [Escherichia coli DEC1B]
gi|377858151|gb|EHU22995.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC1D]
gi|377861539|gb|EHU26357.1| cbl transcriptional activator [Escherichia coli DEC1E]
gi|377863971|gb|EHU28770.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC2A]
gi|377874944|gb|EHU39565.1| cbl transcriptional activator [Escherichia coli DEC2B]
gi|377878928|gb|EHU43503.1| cbl transcriptional activator [Escherichia coli DEC2C]
gi|377880643|gb|EHU45210.1| cbl transcriptional activator [Escherichia coli DEC2D]
gi|377892599|gb|EHU57044.1| cbl transcriptional activator [Escherichia coli DEC2E]
Length = 316
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|300905092|ref|ZP_07122898.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
84-1]
gi|301307111|ref|ZP_07213143.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
124-1]
gi|415869647|ref|ZP_11540043.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
85-1]
gi|300403004|gb|EFJ86542.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
84-1]
gi|300837677|gb|EFK65437.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
124-1]
gi|315252339|gb|EFU32307.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
85-1]
Length = 316
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GK++ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKQLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|74312518|ref|YP_310937.1| transcriptional regulator Cbl [Shigella sonnei Ss046]
gi|309798182|ref|ZP_07692549.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
145-7]
gi|383178940|ref|YP_005456945.1| transcriptional regulator Cbl [Shigella sonnei 53G]
gi|387612547|ref|YP_006115663.1| LysR family transcriptional regulator [Escherichia coli ETEC
H10407]
gi|414576541|ref|ZP_11433725.1| HTH-type transcriptional regulator cbl [Shigella sonnei 3233-85]
gi|418266296|ref|ZP_12885844.1| cbl transcriptional activator [Shigella sonnei str. Moseley]
gi|419278395|ref|ZP_13820645.1| cbl transcriptional activator [Escherichia coli DEC10E]
gi|419345650|ref|ZP_13887027.1| cbl transcriptional activator [Escherichia coli DEC13A]
gi|419350055|ref|ZP_13891397.1| cbl transcriptional activator [Escherichia coli DEC13B]
gi|419355458|ref|ZP_13896718.1| cbl transcriptional activator [Escherichia coli DEC13C]
gi|419360522|ref|ZP_13901743.1| cbl transcriptional activator [Escherichia coli DEC13D]
gi|419365632|ref|ZP_13906795.1| cbl transcriptional activator [Escherichia coli DEC13E]
gi|419375866|ref|ZP_13916894.1| cbl transcriptional activator [Escherichia coli DEC14B]
gi|419381207|ref|ZP_13922162.1| cbl transcriptional activator [Escherichia coli DEC14C]
gi|419386462|ref|ZP_13927342.1| cbl transcriptional activator [Escherichia coli DEC14D]
gi|419922324|ref|ZP_14440344.1| transcriptional regulator Cbl [Escherichia coli 541-15]
gi|420359039|ref|ZP_14860015.1| HTH-type transcriptional regulator cbl [Shigella sonnei 3226-85]
gi|421774414|ref|ZP_16211027.1| cys regulon transcriptional regulator Cbl [Escherichia coli AD30]
gi|422786573|ref|ZP_16839312.1| LysR substrate binding domain-containing protein [Escherichia coli
H489]
gi|432637227|ref|ZP_19873103.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE81]
gi|432750444|ref|ZP_19985051.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE29]
gi|432955421|ref|ZP_20147361.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE197]
gi|73855995|gb|AAZ88702.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Shigella sonnei Ss046]
gi|308118232|gb|EFO55494.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
145-7]
gi|309702283|emb|CBJ01601.1| LysR-family transcriptional regulator [Escherichia coli ETEC
H10407]
gi|323961841|gb|EGB57441.1| LysR substrate binding domain-containing protein [Escherichia coli
H489]
gi|378128966|gb|EHW90345.1| cbl transcriptional activator [Escherichia coli DEC10E]
gi|378187149|gb|EHX47764.1| cbl transcriptional activator [Escherichia coli DEC13A]
gi|378201277|gb|EHX61724.1| cbl transcriptional activator [Escherichia coli DEC13C]
gi|378201296|gb|EHX61742.1| cbl transcriptional activator [Escherichia coli DEC13B]
gi|378205452|gb|EHX65867.1| cbl transcriptional activator [Escherichia coli DEC13D]
gi|378213279|gb|EHX73595.1| cbl transcriptional activator [Escherichia coli DEC13E]
gi|378220563|gb|EHX80820.1| cbl transcriptional activator [Escherichia coli DEC14B]
gi|378228498|gb|EHX88654.1| cbl transcriptional activator [Escherichia coli DEC14C]
gi|378231830|gb|EHX91935.1| cbl transcriptional activator [Escherichia coli DEC14D]
gi|388396496|gb|EIL57596.1| transcriptional regulator Cbl [Escherichia coli 541-15]
gi|391282640|gb|EIQ41270.1| HTH-type transcriptional regulator cbl [Shigella sonnei 3226-85]
gi|391284959|gb|EIQ43546.1| HTH-type transcriptional regulator cbl [Shigella sonnei 3233-85]
gi|397899918|gb|EJL16287.1| cbl transcriptional activator [Shigella sonnei str. Moseley]
gi|408461044|gb|EKJ84822.1| cys regulon transcriptional regulator Cbl [Escherichia coli AD30]
gi|431172216|gb|ELE72367.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE81]
gi|431297361|gb|ELF87019.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE29]
gi|431468092|gb|ELH48098.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE197]
Length = 316
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|424514393|ref|ZP_17959148.1| HTH-type transciptional regulator cbl [Escherichia coli TW14313]
gi|390849534|gb|EIP12961.1| HTH-type transciptional regulator cbl [Escherichia coli TW14313]
Length = 316
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDMSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L I+L +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|218554563|ref|YP_002387476.1| transcriptional regulator Cbl [Escherichia coli IAI1]
gi|307312433|ref|ZP_07592067.1| transcriptional regulator, LysR family [Escherichia coli W]
gi|331668675|ref|ZP_08369523.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA271]
gi|332278848|ref|ZP_08391261.1| transcriptional regulator cys regulon [Shigella sp. D9]
gi|378712583|ref|YP_005277476.1| LysR family transcriptional regulator [Escherichia coli KO11FL]
gi|386609359|ref|YP_006124845.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli W]
gi|386701049|ref|YP_006164886.1| transcriptional regulator Cbl [Escherichia coli KO11FL]
gi|386709838|ref|YP_006173559.1| transcriptional regulator Cbl [Escherichia coli W]
gi|415797786|ref|ZP_11498191.1| HTH-type transcriptional regulator cbl [Escherichia coli E128010]
gi|415829703|ref|ZP_11515776.1| HTH-type transcriptional regulator cbl [Escherichia coli OK1357]
gi|416345599|ref|ZP_11679081.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli EC4100B]
gi|417135296|ref|ZP_11980081.1| cys regulon transcriptional regulator Cbl [Escherichia coli 5.0588]
gi|417146260|ref|ZP_11987218.1| cys regulon transcriptional regulator Cbl [Escherichia coli 1.2264]
gi|417221917|ref|ZP_12025357.1| cys regulon transcriptional regulator Cbl [Escherichia coli 96.154]
gi|417238024|ref|ZP_12035755.1| cys regulon transcriptional regulator Cbl [Escherichia coli 9.0111]
gi|417248837|ref|ZP_12040622.1| cys regulon transcriptional regulator Cbl [Escherichia coli 4.0967]
gi|417602581|ref|ZP_12253151.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_94C]
gi|417608574|ref|ZP_12259080.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_DG131-3]
gi|417623894|ref|ZP_12274193.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_H.1.8]
gi|419289942|ref|ZP_13832035.1| cbl transcriptional activator [Escherichia coli DEC11A]
gi|419295269|ref|ZP_13837315.1| cbl transcriptional activator [Escherichia coli DEC11B]
gi|419306831|ref|ZP_13848731.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11D]
gi|419311830|ref|ZP_13853692.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11E]
gi|419317116|ref|ZP_13858926.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC12A]
gi|419323275|ref|ZP_13864975.1| cbl transcriptional activator [Escherichia coli DEC12B]
gi|419329266|ref|ZP_13870876.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC12C]
gi|419334857|ref|ZP_13876393.1| cbl transcriptional activator [Escherichia coli DEC12D]
gi|419340278|ref|ZP_13881751.1| cbl transcriptional activator [Escherichia coli DEC12E]
gi|419805832|ref|ZP_14330957.1| transcriptional regulator, LysR family [Escherichia coli AI27]
gi|419950283|ref|ZP_14466500.1| transcriptional regulator Cbl [Escherichia coli CUMT8]
gi|420391721|ref|ZP_14890974.1| cbl transcriptional activator [Escherichia coli EPEC C342-62]
gi|432831949|ref|ZP_20065523.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE135]
gi|218361331|emb|CAQ98917.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli IAI1]
gi|306907604|gb|EFN38107.1| transcriptional regulator, LysR family [Escherichia coli W]
gi|315061276|gb|ADT75603.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli W]
gi|320198670|gb|EFW73270.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli EC4100B]
gi|323161914|gb|EFZ47788.1| HTH-type transcriptional regulator cbl [Escherichia coli E128010]
gi|323183764|gb|EFZ69155.1| HTH-type transcriptional regulator cbl [Escherichia coli OK1357]
gi|323378144|gb|ADX50412.1| transcriptional regulator, LysR family [Escherichia coli KO11FL]
gi|331063869|gb|EGI35780.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA271]
gi|332101200|gb|EGJ04546.1| transcriptional regulator cys regulon [Shigella sp. D9]
gi|345350247|gb|EGW82522.1| HTH-type transcriptional regulator cbl [Escherichia coli STEC_94C]
gi|345359164|gb|EGW91343.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_DG131-3]
gi|345376855|gb|EGX08787.1| HTH-type transcriptional regulator cbl [Escherichia coli
STEC_H.1.8]
gi|378130350|gb|EHW91715.1| cbl transcriptional activator [Escherichia coli DEC11A]
gi|378142356|gb|EHX03558.1| cbl transcriptional activator [Escherichia coli DEC11B]
gi|378148818|gb|EHX09951.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11D]
gi|378157458|gb|EHX18489.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11E]
gi|378166352|gb|EHX27276.1| cbl transcriptional activator [Escherichia coli DEC12B]
gi|378170379|gb|EHX31262.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC12A]
gi|378171366|gb|EHX32236.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC12C]
gi|378183306|gb|EHX43951.1| cbl transcriptional activator [Escherichia coli DEC12D]
gi|378189610|gb|EHX50201.1| cbl transcriptional activator [Escherichia coli DEC12E]
gi|383392576|gb|AFH17534.1| transcriptional regulator Cbl [Escherichia coli KO11FL]
gi|383405530|gb|AFH11773.1| transcriptional regulator Cbl [Escherichia coli W]
gi|384471143|gb|EIE55229.1| transcriptional regulator, LysR family [Escherichia coli AI27]
gi|386153150|gb|EIH04439.1| cys regulon transcriptional regulator Cbl [Escherichia coli 5.0588]
gi|386163712|gb|EIH25507.1| cys regulon transcriptional regulator Cbl [Escherichia coli 1.2264]
gi|386201719|gb|EII00710.1| cys regulon transcriptional regulator Cbl [Escherichia coli 96.154]
gi|386213802|gb|EII24227.1| cys regulon transcriptional regulator Cbl [Escherichia coli 9.0111]
gi|386220820|gb|EII37283.1| cys regulon transcriptional regulator Cbl [Escherichia coli 4.0967]
gi|388417172|gb|EIL77034.1| transcriptional regulator Cbl [Escherichia coli CUMT8]
gi|391312402|gb|EIQ70010.1| cbl transcriptional activator [Escherichia coli EPEC C342-62]
gi|431375919|gb|ELG61242.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE135]
Length = 316
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRRGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|254449154|ref|ZP_05062605.1| transcriptional regulator CysB [gamma proteobacterium HTCC5015]
gi|198261268|gb|EDY85562.1| transcriptional regulator CysB [gamma proteobacterium HTCC5015]
Length = 323
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 196/303 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q RF+ + N N++ AA+ L+TSQPGVSK I LEEEL + +F R+GK + +T
Sbjct: 1 MKLQQLRFLAAIAKYNLNISAAAEKLFTSQPGVSKQIKLLEEELGVQLFSRNGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ +I++E +K + +EF + G LT+ATTHTQARY LP +I++F+ +FP
Sbjct: 61 PIGERVIEKANLILKEAANIKALAEEFRDDNKGTLTLATTHTQARYVLPAVIRQFSAEFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL+L+QG+P++I+ M + +AD+AI TE ++ L+ +P Y+W ++VP H L
Sbjct: 121 EVKLNLIQGSPERISRMAVSGEADLAIATEAIASYSDLVMMPAYRWNRCLVVPRGHELTF 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL ++ YP++TY +GR +D F+ + L+P IV ++D+IKTYV L MG+
Sbjct: 181 AKKISLGALAQYPMVTYVKGLTGRGVMDEAFAKEGLSPEIVFTATDADVIKTYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA A+++ D +L ++ HLF +I+ V + G Y+R Y+ F++L SP+ +R I
Sbjct: 241 GLIARQAYENRLDSDLVAVDVGHLFQDSITYVGFRSGAYMRKYMLRFLELFSPQFDRDQI 300
Query: 301 NKI 303
KI
Sbjct: 301 EKI 303
>gi|114562627|ref|YP_750140.1| transcriptional regulator CysB [Shewanella frigidimarina NCIMB 400]
gi|114333920|gb|ABI71302.1| transcriptional regulator, LysR family [Shewanella frigidimarina
NCIMB 400]
Length = 325
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 194/303 (64%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V+ N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVKHNLNVSSTAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ +++ +KK+ +E++ + G+L I TT TQARYALP+IIKEF ++P
Sbjct: 61 PAGQQVIDIANDILGKVDSIKKVSEEYTQPNQGDLNITTTDTQARYALPQIIKEFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYTDLIMLPCYHWNRSIVVTRDHPLAT 180
Query: 181 LNS-ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++ IS+++++ +PL+TY F ++++ F L P +V ++D++KTYV L +G
Sbjct: 181 QSTKISIEDLAKFPLVTYVFGFDKASEIEKSFKRADLDPRVVFSATSADVLKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G+IAS+A D DK+L +I ASHLF + +++ ++G++LRSY+Y F++ +P L R
Sbjct: 241 VGVIASMAIDPAVDKDLVAIDASHLFAHSTTKIGFRRGSFLRSYMYDFMRHFAPHLTRDV 300
Query: 300 INK 302
+ K
Sbjct: 301 VEK 303
>gi|212556062|gb|ACJ28516.1| Regulatory protein, LysR:LysR, substrate-binding [Shewanella
piezotolerans WP3]
Length = 324
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGLQVISIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPHIIQGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEAMHLYNDLIMLPCYHWNRSIVVTRDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSHISIEDLGRFPLVTYVFGFDRASEIEKSFNRAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D + DK+L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L R +
Sbjct: 241 GVIASMAIDEHMDKDLVAIDASHLFAHSTTKIGFRKGNFLRTYMYDFIENFAPHLTRTVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|442611584|ref|ZP_21026290.1| Cys regulon transcriptional activator CysB [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747512|emb|CCQ12352.1| Cys regulon transcriptional activator CysB [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 325
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 190/303 (62%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVLNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G ++ I+ ++E +K + E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGNEVIHIARQILSKVESIKAVANEHTLPDQGKLNIATTHTQARYALPTVIKGFMNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P+QI++ AD AI TE L LI +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPQQISDAAARGDADFAIATEALHLYSDLIMLPCYHWNRSIVVTKDHPLAK 180
Query: 181 LN-SISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
++++ +++ +PLITY F+GR +LD+ F L P+IV ++D+IKTYV L +G
Sbjct: 181 KGKNLTVPDVAAFPLITYVFGFTGRSELDKAFGAHGLEPHIVFTATDADVIKTYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+G++A++A D +D +L I ASHLF + +++ ++G++LR Y+Y FI+ +P L +
Sbjct: 241 VGVLATMAVDKTQDSDLVCIDASHLFEASTTKIGFRKGSFLRGYMYDFIERFAPHLTKDV 300
Query: 300 INK 302
+ +
Sbjct: 301 VER 303
>gi|422971984|ref|ZP_16975036.1| HTH-type transcriptional regulator cbl [Escherichia coli TA124]
gi|371598292|gb|EHN87099.1| HTH-type transcriptional regulator cbl [Escherichia coli TA124]
Length = 316
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 199/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIAMLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+
Sbjct: 241 GLVAEQSSSEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLS 296
>gi|300951626|ref|ZP_07165452.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
116-1]
gi|300449130|gb|EFK12750.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
116-1]
Length = 316
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 203/302 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + A HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDARHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|238783232|ref|ZP_04627257.1| HTH-type transcriptional regulator cbl [Yersinia bercovieri ATCC
43970]
gi|238715825|gb|EEQ07812.1| HTH-type transcriptional regulator cbl [Yersinia bercovieri ATCC
43970]
Length = 318
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 203/296 (68%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+I+IR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIYIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLTVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QGNP++I M+ + +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGNPQEIAAMLHSGEADIGIATELLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+L +S+ PLITY +GR +LD F LTP I L +SD+IKTYVEL +G+
Sbjct: 181 EANITLATLSSLPLITYRQGITGRSRLDNAFKNAGLTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEADRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|170726158|ref|YP_001760184.1| transcriptional regulator CysB [Shewanella woodyi ATCC 51908]
gi|169811505|gb|ACA86089.1| transcriptional regulator, LysR family [Shewanella woodyi ATCC
51908]
Length = 324
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGEQVISIANNILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPNIIRGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYSDLIMLPCYHWNRSIVVKRDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++IS++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSNISIEDLGRFPLVTYVFGFDRESEIEKSFNSAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D++L +I ASHLFG + +++ ++G +LR+Y+Y FI+ +P L ++ +
Sbjct: 241 GVIASMAIDPVMDRDLVAIDASHLFGHSTTKIGFRKGNFLRTYMYEFIEHFAPHLTKEVV 300
Query: 301 NKILN 305
K +
Sbjct: 301 EKAVG 305
>gi|195939496|ref|ZP_03084878.1| transcriptional regulator Cbl, partial [Escherichia coli O157:H7
str. EC4024]
Length = 301
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 195/292 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L I+L +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLS 292
G++A + +KNL + HLF + +K+G R+YV+ F++L +
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCN 292
>gi|455642208|gb|EMF21374.1| transcriptional regulator Cbl [Citrobacter freundii GTC 09479]
Length = 316
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 196/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLIIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPQDHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 181 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLIPDIILSAQDSDVIKTYVSLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|238898828|ref|YP_002924510.1| LysR family transcriptional regulator [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466588|gb|ACQ68362.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR familiy)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 324
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 188/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + NL+ A LYTSQPG+SK I LEEEL I IF R+GK + +T
Sbjct: 1 MKLQQLRYIVEIVNHDLNLSSTAAGLYTSQPGISKQIKMLEEELGIQIFARNGKHLTEIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ I+ + I+ ++ +K + E+ A D G L IATTHTQARY LPK+IK F +P
Sbjct: 61 VPGKKIMVMAQEILAKVSLIKAVATEYKAPDQGVLCIATTHTQARYTLPKLIKGFIKNYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG+P QI + + + D+AI TE + +PCY+W +I+V DHPL
Sbjct: 121 KVSLHIHQGSPIQIADALSKGKVDLAITTEDEDLYGDAVMLPCYRWRRIIVVKPDHPLAH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S +++E++ YP++TY F+GR LD+ F LTP I ++D+IKTYV L +G+
Sbjct: 181 RTSFNIQELAAYPIVTYTFGFTGRSTLDKAFYASGLTPNIAFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA+IA D +D +L I A +F +I+ + ++ T+LR Y+Y F+K +P L R +
Sbjct: 241 GVIANIAMDPIQDSDLIRIDARAIFDDSITHIGFRRHTFLRGYMYDFVKRFAPHLTRTLV 300
Query: 301 NK 302
+K
Sbjct: 301 DK 302
>gi|254490567|ref|ZP_05103753.1| LysR substrate binding domain protein [Methylophaga thiooxidans
DMS010]
gi|224464311|gb|EEF80574.1| LysR substrate binding domain protein [Methylophaga thiooxydans
DMS010]
Length = 324
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 190/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ V + N+++ A +TSQPGVS+ I LEEEL++DIF R+G+ + GLT
Sbjct: 1 MKLQQIKYLVGIVTNDLNVSKTADKFFTSQPGVSRQIKLLEEELNVDIFERNGRLLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G AIL ++ + +K + KEFS +G LTIATTHTQARY LP+ I FT
Sbjct: 61 PVGNAILEMASEVLDRVNNIKSVAKEFSEEISGKLTIATTHTQARYVLPRTIIHFTNMHE 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L QGNP Q EM+ D AI +E + LI+ PCY W +++V DHPL
Sbjct: 121 SVGFQLKQGNPHQAFEMVSKGMVDFAIASEAMDDFSNLITFPCYSWNRLVLVKRDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++++S YPL+TY+ F+GR +L+ F L P I+L ++DIIK YV++ +G+
Sbjct: 181 GAPISIEQLSKYPLVTYENGFTGRYQLNNAFQKAGLEPNIMLTASDADIIKAYVKMDLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A+D + D +L SI+ LF ++++ I++G LRSY+Y FI+L SP L+R +
Sbjct: 241 GVIASVAYDPDDDCDLVSINVRELFDDCVAKIAIRKGVSLRSYMYDFIELFSPHLSRDIV 300
Query: 301 NKIL 304
+ L
Sbjct: 301 ERTL 304
>gi|421844186|ref|ZP_16277344.1| transcriptional regulator Cbl [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411774341|gb|EKS57831.1| transcriptional regulator Cbl [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 316
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 196/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLIIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPQDHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 181 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLIPDIILSAQDSDVIKTYVSLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|301017425|ref|ZP_07182157.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
196-1]
gi|422819135|ref|ZP_16867346.1| HTH-type transcriptional regulator cbl [Escherichia coli M919]
gi|432564214|ref|ZP_19800802.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE51]
gi|299882725|gb|EFI90936.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
196-1]
gi|385537321|gb|EIF84198.1| HTH-type transcriptional regulator cbl [Escherichia coli M919]
gi|431094207|gb|ELD99854.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE51]
Length = 316
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEGSNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|293410340|ref|ZP_06653916.1| transcriptional regulator [Escherichia coli B354]
gi|432947886|ref|ZP_20143042.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE196]
gi|433043568|ref|ZP_20231066.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE117]
gi|291470808|gb|EFF13292.1| transcriptional regulator [Escherichia coli B354]
gi|431457864|gb|ELH38201.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE196]
gi|431556301|gb|ELI30088.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE117]
Length = 316
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 204/307 (66%), Gaps = 1/307 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 N-KILNN 306
K++ N
Sbjct: 301 KRKVMEN 307
>gi|365106115|ref|ZP_09334993.1| HTH-type transcriptional regulator cbl [Citrobacter freundii
4_7_47CFAA]
gi|363642514|gb|EHL81863.1| HTH-type transcriptional regulator cbl [Citrobacter freundii
4_7_47CFAA]
Length = 316
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 196/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLIIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPHDHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 181 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLIPDIILSAQDSDVIKTYVSLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|432407022|ref|ZP_19649731.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE28]
gi|430929781|gb|ELC50290.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE28]
Length = 316
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|425288934|ref|ZP_18679790.1| HTH-type transciptional regulator cbl [Escherichia coli 3006]
gi|408214228|gb|EKI38677.1| HTH-type transciptional regulator cbl [Escherichia coli 3006]
Length = 316
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIKIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|308187395|ref|YP_003931526.1| RuBisCO transcriptional regulator [Pantoea vagans C9-1]
gi|308057905|gb|ADO10077.1| Probable RuBisCO transcriptional regulator [Pantoea vagans C9-1]
Length = 319
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 196/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPKIIK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGILTIATTHTQARYSLPKIIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E+L + L + P + W + ++VP DH L+
Sbjct: 121 NVRLELNQGSPQEIVTMLLAGEADIGIASEMLVNNSSLAAFPWFSWHHALLVPKDHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 NQPVSLSTLSRYPLITYRQGITGRSRVDRAFQSAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A ++ + L I A+HLF + + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACETEESEELVRIDATHLFDASTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|407790234|ref|ZP_11137330.1| transcriptional regulator CysB [Gallaecimonas xiamenensis 3-C-1]
gi|407205249|gb|EKE75225.1| transcriptional regulator CysB [Gallaecimonas xiamenensis 3-C-1]
Length = 324
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 192/304 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVRNHNLNVSATAESLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AI+ E ++ + + ++ + E + D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 AAGKAIIAIAEEMLNKADAIRSVAFEHTQPDRGKLHIATTHTQARYALPPVIRGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI E + AD AI TE L D LI +PCY W I+V DHPL
Sbjct: 121 KVSLHMHQGTPTQIAEAVVRGDADFAIATEALHLYDDLIMLPCYHWNRSIVVKKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L SI + E++ YP++TY F+GR LD F+ + L P+IV ++D+IKTYV L +G+
Sbjct: 181 LASIGIDELAKYPIVTYVFGFTGRSDLDEGFAKEGLEPHIVFTATDTDVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L +I ASHLF + +++ ++ ++LR Y+Y FI+ +P L R +
Sbjct: 241 GVIASMAHDPVLDADLVAIDASHLFRASTTKIGFRKSSFLRGYMYDFIEGFAPHLTRAVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DEAI 304
>gi|432850961|ref|ZP_20081656.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE144]
gi|431400283|gb|ELG83665.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE144]
Length = 316
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIVKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|331663477|ref|ZP_08364387.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA143]
gi|417137788|ref|ZP_11981553.1| cys regulon transcriptional regulator Cbl [Escherichia coli
97.0259]
gi|417308464|ref|ZP_12095312.1| HTH-type transcriptional regulator cbl [Escherichia coli PCN033]
gi|422334107|ref|ZP_16415115.1| HTH-type transcriptional regulator cbl [Escherichia coli 4_1_47FAA]
gi|432397806|ref|ZP_19640587.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE25]
gi|432719099|ref|ZP_19954068.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE9]
gi|432723430|ref|ZP_19958350.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE17]
gi|432728017|ref|ZP_19962896.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE18]
gi|432741711|ref|ZP_19976430.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE23]
gi|432991018|ref|ZP_20179682.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE217]
gi|433111229|ref|ZP_20297094.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE150]
gi|331059276|gb|EGI31253.1| cys regulon transcriptional regulator Cbl [Escherichia coli TA143]
gi|338769900|gb|EGP24672.1| HTH-type transcriptional regulator cbl [Escherichia coli PCN033]
gi|373244929|gb|EHP64406.1| HTH-type transcriptional regulator cbl [Escherichia coli 4_1_47FAA]
gi|386158534|gb|EIH14869.1| cys regulon transcriptional regulator Cbl [Escherichia coli
97.0259]
gi|430915910|gb|ELC36988.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE25]
gi|431262911|gb|ELF54900.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE9]
gi|431265984|gb|ELF57546.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE17]
gi|431273706|gb|ELF64780.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE18]
gi|431283402|gb|ELF74261.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE23]
gi|431495100|gb|ELH74686.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE217]
gi|431628533|gb|ELI96909.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE150]
Length = 316
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|213025078|ref|ZP_03339525.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 311
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/287 (43%), Positives = 183/287 (63%)
Query: 15 QNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIM 74
N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T GQ I+R ++
Sbjct: 2 HNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVL 61
Query: 75 QEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQI 134
+++ +K + E + D G+L IATTHTQARYALP +IK F ++P+V L + QG+P QI
Sbjct: 62 SKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQI 121
Query: 135 TEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPL 194
E + AD AI TE L D L+ +PCY W I+V DHPL +SI+++ ++ YPL
Sbjct: 122 AEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAATSSITIEALAQYPL 181
Query: 195 ITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDK 254
+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+G+IAS+A D D
Sbjct: 182 VTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPLTDP 241
Query: 255 NLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFIN 301
+L I A +F + +++ ++ T+LRSY+Y FI+ +P L R ++
Sbjct: 242 DLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVD 288
>gi|374623170|ref|ZP_09695685.1| transcriptional regulator CysB [Ectothiorhodospira sp. PHS-1]
gi|373942286|gb|EHQ52831.1| transcriptional regulator CysB [Ectothiorhodospira sp. PHS-1]
Length = 329
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 191/306 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+++ R N N++EAA L TSQPG+SK I LEEEL + +F R+GK + G+T
Sbjct: 1 MKLQQLRYLQAIARYNLNISEAADRLATSQPGISKQIRLLEEELGVPLFQRNGKHLSGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +L E+I++E+E ++ +E G+L IATTH QARY LP I+ F +FP
Sbjct: 61 AVGRRVLEYSEVILREVENIRAAAEEARDEQAGDLRIATTHAQARYILPPIVDAFRHRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ + QG P+QI +M+ +D+ D + TE + S ++I +P Y+W + ++VP H L
Sbjct: 121 RVRVQIHQGTPRQIADMLSHDEVDFIVATEPMLASGQVIVLPAYRWSHCVVVPKGHELAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I L+ +++YP++TY FSGR KLD +F LTP +VL ++D+IKTYV MG+
Sbjct: 181 AGAIPLERLADYPIVTYLDGFSGRTKLDADFRRAGLTPDVVLTAADADVIKTYVRHGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA IA + D +L ++ I+R+ ++G +LR Y+Y FI LL+P L + +
Sbjct: 241 GIIARIALEKGHDDDLVALDTEPGLSENITRIGFRRGAWLRGYMYDFITLLAPHLTHEHV 300
Query: 301 NKILNN 306
+ N
Sbjct: 301 AQAAQN 306
>gi|187733604|ref|YP_001879649.1| transcriptional regulator Cbl [Shigella boydii CDC 3083-94]
gi|187430596|gb|ACD09870.1| transcriptional regulator Cbl [Shigella boydii CDC 3083-94]
Length = 316
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTFGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VPLDHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|262274480|ref|ZP_06052291.1| regulatory protein CysB [Grimontia hollisae CIP 101886]
gi|262221043|gb|EEY72357.1| regulatory protein CysB [Grimontia hollisae CIP 101886]
Length = 324
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 191/305 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V + N++ A++LYTSQPG+SK I LE+EL + IF R GK + LT
Sbjct: 1 MKLQQLKYIVEVVNHDLNVSSTAESLYTSQPGISKQIRALEDELGVQIFGRSGKHLTKLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ ++ +K + +E++ G L IATTHTQARYALP +I F ++P
Sbjct: 61 PAGRQIVDIARDILSRVDSIKSVAQEYTHPGCGQLNIATTHTQARYALPAVISGFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI E + +D AI TE + L+ +PCY W +IV DHPL
Sbjct: 121 NVSLHMHQGAPSQIAEFVLKGTSDFAIATEASYLYEDLLMLPCYHWTRALIVRKDHPLAR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SIS+ +I+ +PL+TY F+GR LD F+ KL P IV ++D+IKTYV L +G+
Sbjct: 181 RPSISIYDIAQFPLVTYVFGFTGRSSLDTAFNKAKLKPNIVFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A +A+D+ D +L +I ASH+F + +R+ ++GT LR+Y+Y FI+ +P L R+ I
Sbjct: 241 GVMARMAYDNQLDDDLVAIDASHIFEASTTRIGFRRGTVLRNYMYDFIESFAPHLTRENI 300
Query: 301 NKILN 305
+ ++
Sbjct: 301 DTVVQ 305
>gi|417707914|ref|ZP_12356951.1| HTH-type transcriptional regulator cbl [Shigella flexneri VA-6]
gi|417712930|ref|ZP_12361905.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-272]
gi|417717688|ref|ZP_12366595.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-227]
gi|420331698|ref|ZP_14833360.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-1770]
gi|333002776|gb|EGK22335.1| HTH-type transcriptional regulator cbl [Shigella flexneri VA-6]
gi|333004099|gb|EGK23633.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-272]
gi|333017503|gb|EGK36816.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-227]
gi|391252132|gb|EIQ11334.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-1770]
Length = 316
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG+P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR + D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRTDDAFTRKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|301018087|ref|ZP_07182638.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
69-1]
gi|300399868|gb|EFJ83406.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
69-1]
Length = 316
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTH QARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHIQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLHNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L I+L +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIILSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + +KNL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|429083070|ref|ZP_19146120.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter condimenti 1330]
gi|426548161|emb|CCJ72161.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter condimenti 1330]
Length = 323
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/296 (46%), Positives = 201/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 7 VNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 66
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP IIK F FP
Sbjct: 67 EPGKALLVIAERILNEASNVRRLADHFTNDASGILTIATTHTQARYSLPAIIKTFRSLFP 126
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 127 EVRLELIQGTPQEINTLLQNGTADIGIASERLSADPGLVAYPWFRWHHSLLVPKDHPLTQ 186
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N ++L +IS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 187 ANPLTLDDISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 246
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A +A D++ + L + HLF + + +K+G R+YV+ FI+L + L+
Sbjct: 247 GLVAELASDAHDENCLTRLDTRHLFDASTVWLGLKRGQLQRNYVWRFIELCNNGLS 302
>gi|432894854|ref|ZP_20106675.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE165]
gi|431422767|gb|ELH04959.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE165]
Length = 316
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG+P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFVRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417841072|ref|ZP_12487178.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M19501]
gi|341949972|gb|EGT76569.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M19501]
Length = 323
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPSDTDLVAIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|170682115|ref|YP_001743206.1| transcriptional regulator Cbl [Escherichia coli SMS-3-5]
gi|419370408|ref|ZP_13911528.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC14A]
gi|170519833|gb|ACB18011.1| transcriptional regulator Cbl [Escherichia coli SMS-3-5]
gi|378217793|gb|EHX78068.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC14A]
Length = 316
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLGLIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|317048698|ref|YP_004116346.1| LysR family transcriptional regulator [Pantoea sp. At-9b]
gi|316950315|gb|ADU69790.1| transcriptional regulator, LysR family [Pantoea sp. At-9b]
Length = 319
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGVLTIATTHTQARYSLPRVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E L + L + P + W + ++VP DH LL
Sbjct: 121 NVRLELNQGSPQEIVAMLLAGEADIGIASEQLVNNASLAAFPWFSWHHSLLVPHDHELLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL ++ YPLITY +GR ++DR F L P IVL +SD++KTYVEL +G+
Sbjct: 181 SEPVSLGQLGRYPLITYRQGITGRSRVDRAFQAAGLKPDIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A D ++L I A HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACDIYDGEDLVKIDAGHLFDANTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|16129929|ref|NP_416492.1| DNA-binding transcriptional activator for the ssuEADCB and tauABCD
operons [Escherichia coli str. K-12 substr. MG1655]
gi|170081620|ref|YP_001730940.1| transcriptional regulator Cbl [Escherichia coli str. K-12 substr.
DH10B]
gi|238901182|ref|YP_002926978.1| transcriptional regulator Cbl [Escherichia coli BW2952]
gi|251785371|ref|YP_002999675.1| Cbl transcriptional activator [Escherichia coli BL21(DE3)]
gi|253773070|ref|YP_003035901.1| transcriptional regulator Cbl [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161985|ref|YP_003045093.1| transcriptional regulator Cbl [Escherichia coli B str. REL606]
gi|254288773|ref|YP_003054521.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli BL21(DE3)]
gi|300822240|ref|ZP_07102381.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
119-7]
gi|300920209|ref|ZP_07136655.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
115-1]
gi|300931204|ref|ZP_07146548.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
187-1]
gi|301645488|ref|ZP_07245424.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
146-1]
gi|331652795|ref|ZP_08353801.1| cys regulon transcriptional regulator Cbl [Escherichia coli M718]
gi|386595220|ref|YP_006091620.1| LysR family transcriptional regulator [Escherichia coli DH1]
gi|387621698|ref|YP_006129325.1| transcriptional regulator Cbl [Escherichia coli DH1]
gi|388478043|ref|YP_490231.1| DNA-binding transcriptional activator [Escherichia coli str. K-12
substr. W3110]
gi|417271244|ref|ZP_12058593.1| cys regulon transcriptional regulator Cbl [Escherichia coli 2.4168]
gi|417291790|ref|ZP_12079071.1| cys regulon transcriptional regulator Cbl [Escherichia coli B41]
gi|417688749|ref|ZP_12337989.1| HTH-type transcriptional regulator cbl [Shigella boydii 5216-82]
gi|417947564|ref|ZP_12590727.1| transcriptional regulator Cbl [Escherichia coli XH140A]
gi|417979354|ref|ZP_12620063.1| transcriptional regulator Cbl [Escherichia coli XH001]
gi|418042177|ref|ZP_12680383.1| cys regulon transcriptional regulator Cbl [Escherichia coli W26]
gi|418957653|ref|ZP_13509576.1| cys regulon transcriptional regulator Cbl [Escherichia coli J53]
gi|420346251|ref|ZP_14847672.1| HTH-type transcriptional regulator cbl [Shigella boydii 965-58]
gi|425115374|ref|ZP_18517180.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0566]
gi|432358314|ref|ZP_19601542.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE4]
gi|432392472|ref|ZP_19635307.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE21]
gi|432534246|ref|ZP_19771222.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE234]
gi|432685775|ref|ZP_19921077.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE156]
gi|432834965|ref|ZP_20068504.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE136]
gi|442594485|ref|ZP_21012384.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|450244634|ref|ZP_21900485.1| transcriptional regulator Cbl [Escherichia coli S17]
gi|2833425|sp|Q47083.2|CBL_ECOLI RecName: Full=HTH-type transcriptional regulator cbl
gi|1736649|dbj|BAA15805.1| DNA-binding transcriptional activator [Escherichia coli str. K12
substr. W3110]
gi|1788296|gb|AAC75049.1| DNA-binding transcriptional activator for the ssuEADCB and tauABCD
operons [Escherichia coli str. K-12 substr. MG1655]
gi|169889455|gb|ACB03162.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli str. K-12 substr. DH10B]
gi|238860900|gb|ACR62898.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli BW2952]
gi|242377644|emb|CAQ32403.1| Cbl transcriptional activator [Escherichia coli BL21(DE3)]
gi|253324114|gb|ACT28716.1| transcriptional regulator, LysR family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973886|gb|ACT39557.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli B str. REL606]
gi|253978080|gb|ACT43750.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli BL21(DE3)]
gi|260448909|gb|ACX39331.1| transcriptional regulator, LysR family [Escherichia coli DH1]
gi|300412711|gb|EFJ96021.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
115-1]
gi|300460975|gb|EFK24468.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
187-1]
gi|300525123|gb|EFK46192.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
119-7]
gi|301076224|gb|EFK91030.1| cys regulon transcriptional regulator Cbl [Escherichia coli MS
146-1]
gi|315136621|dbj|BAJ43780.1| transcriptional regulator Cbl [Escherichia coli DH1]
gi|331049551|gb|EGI21622.1| cys regulon transcriptional regulator Cbl [Escherichia coli M718]
gi|332093062|gb|EGI98126.1| HTH-type transcriptional regulator cbl [Shigella boydii 5216-82]
gi|342360705|gb|EGU24889.1| transcriptional regulator Cbl [Escherichia coli XH140A]
gi|344190998|gb|EGV45159.1| transcriptional regulator Cbl [Escherichia coli XH001]
gi|359332400|dbj|BAL38847.1| DNA-binding transcriptional activator [Escherichia coli str. K-12
substr. MDS42]
gi|383474854|gb|EID66827.1| cys regulon transcriptional regulator Cbl [Escherichia coli W26]
gi|384379262|gb|EIE37130.1| cys regulon transcriptional regulator Cbl [Escherichia coli J53]
gi|386234944|gb|EII66920.1| cys regulon transcriptional regulator Cbl [Escherichia coli 2.4168]
gi|386254112|gb|EIJ03802.1| cys regulon transcriptional regulator Cbl [Escherichia coli B41]
gi|391274341|gb|EIQ33153.1| HTH-type transcriptional regulator cbl [Shigella boydii 965-58]
gi|408569032|gb|EKK45042.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0566]
gi|430877555|gb|ELC01005.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE4]
gi|430918815|gb|ELC39768.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE21]
gi|431060473|gb|ELD69799.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE234]
gi|431222810|gb|ELF20086.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE156]
gi|431385325|gb|ELG69312.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE136]
gi|441605545|emb|CCP97664.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|449321319|gb|EMD11334.1| transcriptional regulator Cbl [Escherichia coli S17]
Length = 316
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|419863669|ref|ZP_14386175.1| transcriptional regulator Cbl [Escherichia coli O103:H25 str.
CVM9340]
gi|388341564|gb|EIL07659.1| transcriptional regulator Cbl [Escherichia coli O103:H25 str.
CVM9340]
Length = 316
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSSEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|157158758|ref|YP_001463331.1| transcriptional regulator Cbl [Escherichia coli E24377A]
gi|209919463|ref|YP_002293547.1| transcriptional regulator Cbl [Escherichia coli SE11]
gi|260844587|ref|YP_003222365.1| DNA-binding transcriptional activator Cbl of cysteine biosynthesis
[Escherichia coli O103:H2 str. 12009]
gi|260868639|ref|YP_003235041.1| DNA-binding transcriptional activator [Escherichia coli O111:H-
str. 11128]
gi|415823223|ref|ZP_11511742.1| HTH-type transcriptional regulator cbl [Escherichia coli OK1180]
gi|417174867|ref|ZP_12004663.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.2608]
gi|417182469|ref|ZP_12009026.1| cys regulon transcriptional regulator Cbl [Escherichia coli
93.0624]
gi|417192328|ref|ZP_12014428.1| cys regulon transcriptional regulator Cbl [Escherichia coli 4.0522]
gi|417206425|ref|ZP_12019400.1| cys regulon transcriptional regulator Cbl [Escherichia coli JB1-95]
gi|417231589|ref|ZP_12032987.1| cys regulon transcriptional regulator Cbl [Escherichia coli 5.0959]
gi|417592187|ref|ZP_12242884.1| HTH-type transcriptional regulator cbl [Escherichia coli 2534-86]
gi|417597179|ref|ZP_12247825.1| HTH-type transcriptional regulator cbl [Escherichia coli 3030-1]
gi|419197400|ref|ZP_13740791.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC8A]
gi|419203902|ref|ZP_13747090.1| cbl transcriptional activator [Escherichia coli DEC8B]
gi|419221904|ref|ZP_13764829.1| cbl transcriptional activator [Escherichia coli DEC8E]
gi|419300648|ref|ZP_13842647.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11C]
gi|419871467|ref|ZP_14393524.1| transcriptional regulator Cbl [Escherichia coli O103:H2 str.
CVM9450]
gi|419892693|ref|ZP_14412702.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9570]
gi|419898231|ref|ZP_14417793.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9574]
gi|419930677|ref|ZP_14448273.1| transcriptional regulator Cbl [Escherichia coli 541-1]
gi|420091624|ref|ZP_14603366.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9602]
gi|420098291|ref|ZP_14609567.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9634]
gi|422761215|ref|ZP_16814974.1| LysR substrate binding domain-containing protein [Escherichia coli
E1167]
gi|424772175|ref|ZP_18199289.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CFSAN001632]
gi|427805120|ref|ZP_18972187.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Escherichia coli chi7122]
gi|427809677|ref|ZP_18976742.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Escherichia coli]
gi|432481311|ref|ZP_19723269.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE210]
gi|433092396|ref|ZP_20278668.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE138]
gi|443618062|ref|YP_007381918.1| transcriptional regulator Cbl [Escherichia coli APEC O78]
gi|157080788|gb|ABV20496.1| transcriptional regulator Cbl [Escherichia coli E24377A]
gi|209912722|dbj|BAG77796.1| transcriptional regulator for cys regulon [Escherichia coli SE11]
gi|257759734|dbj|BAI31231.1| DNA-binding transcriptional activator Cbl of cysteine biosynthesis
[Escherichia coli O103:H2 str. 12009]
gi|257764995|dbj|BAI36490.1| DNA-binding transcriptional activator Cbl of cysteine biosynthesis
[Escherichia coli O111:H- str. 11128]
gi|323177178|gb|EFZ62768.1| HTH-type transcriptional regulator cbl [Escherichia coli OK1180]
gi|324119029|gb|EGC12918.1| LysR substrate binding domain-containing protein [Escherichia coli
E1167]
gi|345338524|gb|EGW70951.1| HTH-type transcriptional regulator cbl [Escherichia coli 2534-86]
gi|345354747|gb|EGW86964.1| HTH-type transcriptional regulator cbl [Escherichia coli 3030-1]
gi|378047718|gb|EHW10078.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC8A]
gi|378049280|gb|EHW11623.1| cbl transcriptional activator [Escherichia coli DEC8B]
gi|378065930|gb|EHW28069.1| cbl transcriptional activator [Escherichia coli DEC8E]
gi|378150264|gb|EHX11379.1| HTH-type transcriptional regulator cbl [Escherichia coli DEC11C]
gi|386177559|gb|EIH55038.1| cys regulon transcriptional regulator Cbl [Escherichia coli 3.2608]
gi|386184322|gb|EIH67061.1| cys regulon transcriptional regulator Cbl [Escherichia coli
93.0624]
gi|386191210|gb|EIH79956.1| cys regulon transcriptional regulator Cbl [Escherichia coli 4.0522]
gi|386197590|gb|EIH91790.1| cys regulon transcriptional regulator Cbl [Escherichia coli JB1-95]
gi|386204588|gb|EII09099.1| cys regulon transcriptional regulator Cbl [Escherichia coli 5.0959]
gi|388337137|gb|EIL03649.1| transcriptional regulator Cbl [Escherichia coli O103:H2 str.
CVM9450]
gi|388347118|gb|EIL12810.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9570]
gi|388354045|gb|EIL19000.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9574]
gi|388399695|gb|EIL60478.1| transcriptional regulator Cbl [Escherichia coli 541-1]
gi|394381734|gb|EJE59403.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9634]
gi|394382643|gb|EJE60271.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CVM9602]
gi|412963302|emb|CCK47224.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Escherichia coli chi7122]
gi|412969856|emb|CCJ44497.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Escherichia coli]
gi|421938886|gb|EKT96426.1| transcriptional regulator Cbl [Escherichia coli O111:H8 str.
CFSAN001632]
gi|431007968|gb|ELD22779.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE210]
gi|431610538|gb|ELI79828.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE138]
gi|443422570|gb|AGC87474.1| transcriptional regulator Cbl [Escherichia coli APEC O78]
Length = 316
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|425305543|ref|ZP_18695282.1| HTH-type transcriptional regulator cbl [Escherichia coli N1]
gi|408229222|gb|EKI52662.1| HTH-type transcriptional regulator cbl [Escherichia coli N1]
Length = 316
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|237731049|ref|ZP_04561530.1| transcriptional regulator Cbl [Citrobacter sp. 30_2]
gi|226906588|gb|EEH92506.1| transcriptional regulator Cbl [Citrobacter sp. 30_2]
Length = 322
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 196/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 7 VNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 66
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 67 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 126
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 127 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPNDHPLVK 186
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 187 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLIPDIILSAQDSDVIKTYVSLGLGI 246
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 247 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 302
>gi|400405102|ref|YP_006587961.1| transcriptional regulator [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363465|gb|AFP84533.1| transcriptional regulator [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 324
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 189/301 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LEEEL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNISSTAEGLYTSQPGISKQVRMLEEELGVQIFTRSGKHLSQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ ++E +K + E + D G+L +ATTHTQARYALP +IK F ++P
Sbjct: 61 PAGKEIIRIARDVLSKVEAIKAVAGEHTYPDQGSLYVATTHTQARYALPDVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI+E + AD AI TE L D L+ +PCY W I+V +HPL
Sbjct: 121 RVSLHMHQGSPTQISEALSKGGADFAIATEALHLYDDLVMLPCYHWNRAILVLPEHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ E++ YPL+TY F+GR +LD F L P I+ ++D+IKTYV + +G+
Sbjct: 181 NKLLTIDELAAYPLVTYTFGFTGRSELDTAFHRAGLVPRIIFTATDADVIKTYVRMGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A + D +L I+A+ LF + +++ ++ T+LRSY+Y FI +P L R +
Sbjct: 241 GVIANMAVNIQVDSDLVKINAADLFAQSTTKIGFRRSTFLRSYMYYFIYRFAPHLTRDVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|218690046|ref|YP_002398258.1| transcriptional regulator Cbl [Escherichia coli ED1a]
gi|218427610|emb|CAR08511.2| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli ED1a]
Length = 316
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 198/295 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
G++A + ++NL + HLF + +K+G R+YV+ F++L + L
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGL 295
>gi|294670500|ref|ZP_06735380.1| hypothetical protein NEIELOOT_02219 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307779|gb|EFE49022.1| hypothetical protein NEIELOOT_02219 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 316
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 196/306 (64%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA+AL+TSQPGVSK I LEEEL I IFIR GKRI ++
Sbjct: 1 MKLQQLRYALEVYRHNLNVSEAAEALFTSQPGVSKQIRLLEEELGIQIFIRSGKRIISVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L++ E I+ +I+ +K IG EF+ D G LTIATTHT ARY LP II EF +P
Sbjct: 61 QPGKAVLQTAERILHDIQNIKNIGYEFTKQDNGVLTIATTHTLARYILPPIIAEFIGMYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L++ QG P I +M+ + D AI E+ ++L +IPC++W Y +IVP DHPLL
Sbjct: 121 KVSLNIKQGTPSDIQQMVSEGKVDFAITPELPETIEELRNIPCFRWHYGLIVPNDHPLLD 180
Query: 181 LNSI-SLKEISNYPLITYDLSFSGRIKLDREFSLQKL-TPYIVLETINSDIIKTYVELRM 238
+ +L I+ YPLITY+ +F+ + R F + P L ++D++KTYV+L +
Sbjct: 181 HKGVLTLPLITQYPLITYEFAFNQGTNIVRAFHKADIPPPNAALSVADNDVLKTYVKLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
GIGI+A A++ D +L I S L S ++ + +YLR Y+Y FI L +P L ++
Sbjct: 241 GIGIMAKAAYEPKTDSDLTLIDISQLIEPCYSGLLFRPDSYLRGYIYDFIGLFNPSLTKE 300
Query: 299 FINKIL 304
++++L
Sbjct: 301 RLDQLL 306
>gi|291085531|ref|ZP_06353304.2| cys regulon transcriptional regulator Cbl [Citrobacter youngae ATCC
29220]
gi|291071236|gb|EFE09345.1| cys regulon transcriptional regulator Cbl [Citrobacter youngae ATCC
29220]
Length = 322
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 7 VNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 66
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 67 EPGKALLAIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPAVIKAFRELFP 126
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 127 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPHDHPLVN 186
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 187 TSPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLVPDIILSAQDSDVIKTYVALGLGI 246
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + + L + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 247 GLVAEQSSVEQEEGALTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSVEEI 306
Query: 301 NK 302
+
Sbjct: 307 KR 308
>gi|410086021|ref|ZP_11282735.1| Cys regulon transcriptional activator CysB [Morganella morganii
SC01]
gi|421494349|ref|ZP_15941698.1| CYSB [Morganella morganii subsp. morganii KT]
gi|455739422|ref|YP_007505688.1| Cys regulon transcriptional activator CysB [Morganella morganii
subsp. morganii KT]
gi|400191345|gb|EJO24492.1| CYSB [Morganella morganii subsp. morganii KT]
gi|409767569|gb|EKN51645.1| Cys regulon transcriptional activator CysB [Morganella morganii
SC01]
gi|455420985|gb|AGG31315.1| Cys regulon transcriptional activator CysB [Morganella morganii
subsp. morganii KT]
Length = 324
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 189/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK I LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQIRMLEDELGMQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G++++R ++ +I+ +K + E + + G L+IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGESVIRISREVLAKIDAIKAVASEHTYPEQGTLSIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P QI E + +D AI TE L + LI +PCYQW ++V DHPL
Sbjct: 121 HVSLHMHQGTPTQIAEDVCKGNSDFAIATEALHLYNDLIMLPCYQWNRAVVVRRDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ +I+ Y ++TY F+GR +LD F Q L P +V ++D+IKTYV L +GI
Sbjct: 181 RRDLTIADIAEYEIVTYTHGFTGRSELDSTFEKQGLKPKVVFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D DK+L SI F + +++ ++G++LR+Y+Y F+ +P L R +
Sbjct: 241 GIIASMAVDPETDKDLVSIDMRDKFSYSTTKIGFRRGSFLRTYMYDFMWRFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|119945666|ref|YP_943346.1| transcriptional regulator CysB [Psychromonas ingrahamii 37]
gi|119864270|gb|ABM03747.1| cys regulon transcriptional regulator LysR family protein
[Psychromonas ingrahamii 37]
Length = 323
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 190/304 (62%), Gaps = 1/304 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A+ LYTSQPG+SK + LE+EL I +F R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATAENLYTSQPGISKQVRMLEDELGIQVFERSGKHLTKVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R I+ ++E +K I +++ D G L IATTHTQARYALP +I+ F ++P
Sbjct: 61 PAGKEVIRYASEILGKVESIKAIACQYTQPDQGTLNIATTHTQARYALPDVIQGFIKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E + + D AI TE L LI +PCY W +IVP +HPL
Sbjct: 121 KVSLHMHQGTPTQISESVAKGKTDFAIATEALHLYQDLIMLPCYHWNRSVIVPKEHPLAN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ IS+ +I+ YP++TY F+GR +LD F+ P +V ++D+IKTYV L +G+
Sbjct: 181 IKEISIADIAKYPIVTYVFGFTGRSELDEAFNSAGFKPNVVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++AS+A + + D + I A H+F ++ + + ++G++LR Y+Y F+ +P LNR +
Sbjct: 241 GVVASMAINED-DDDFCVIDARHIFKSSTTSIGFRKGSFLRDYMYDFMVRFAPHLNRPLV 299
Query: 301 NKIL 304
K +
Sbjct: 300 EKAI 303
>gi|148826191|ref|YP_001290944.1| transcriptional regulator CysB [Haemophilus influenzae PittEE]
gi|148716351|gb|ABQ98561.1| HTH-type transcriptional regulator CysB [Haemophilus influenzae
PittEE]
Length = 323
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDSAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|145637045|ref|ZP_01792708.1| cys regulon transcriptional activator [Haemophilus influenzae
PittHH]
gi|148828350|ref|YP_001293103.1| transcriptional regulator CysB [Haemophilus influenzae PittGG]
gi|229846230|ref|ZP_04466342.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
gi|386266101|ref|YP_005829593.1| Cys regulon transcriptional activator [Haemophilus influenzae
R2846]
gi|145269699|gb|EDK09639.1| cys regulon transcriptional activator [Haemophilus influenzae
PittHH]
gi|148719592|gb|ABR00720.1| transcriptional regulator CysB [Haemophilus influenzae PittGG]
gi|229811234|gb|EEP46951.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
gi|309973337|gb|ADO96538.1| Cys regulon transcriptional activator [Haemophilus influenzae
R2846]
Length = 323
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDSAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|254490441|ref|ZP_05103627.1| LysR substrate binding domain protein [Methylophaga thiooxidans
DMS010]
gi|224464185|gb|EEF80448.1| LysR substrate binding domain protein [Methylophaga thiooxydans
DMS010]
Length = 306
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M LHQ R++RE VRQN +++EAAK L TSQP VS + LEEEL + +F R GKR+ +T
Sbjct: 1 MQLHQLRYIREIVRQNLSISEAAKVLKTSQPSVSSQLQLLEEELRLKVFERRGKRLVAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +L E ++Q++ ++ + E + G L+I TTHTQA YALP IK F+ ++P
Sbjct: 61 PMGETVLEIAERVLQDVGNIQSLADENHDDEHGTLSIGTTHTQALYALPNSIKAFSERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L++LQG P++++E+ + D+AI TE L + L + PCY W I+VP HPLL
Sbjct: 121 NVHLNMLQGTPREVSELAAAGEIDLAIATEALVQNPALHTFPCYDWNRTIVVPDKHPLLS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ ++ YP++TY + F+GR + D+ F + L P ++ ++D+IK Y + +GI
Sbjct: 181 EKILTLEAVARYPILTYMMDFTGRAQQDQSFHDRGLKPNVIFTATDADVIKKYASIGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AFDS +DK+L+ I ASHLF + +++ ++G+YLR Y ++FI+ +P L ++ I
Sbjct: 241 GIIASMAFDSEQDKSLKGIDASHLFKPSTTQLAFRKGSYLRKYAFAFIECFAPHLTKESI 300
Query: 301 NK 302
K
Sbjct: 301 LK 302
>gi|24113380|ref|NP_707890.1| transcriptional regulator Cbl [Shigella flexneri 2a str. 301]
gi|30063440|ref|NP_837611.1| transcriptional regulator Cbl [Shigella flexneri 2a str. 2457T]
gi|110805973|ref|YP_689493.1| transcriptional regulator Cbl [Shigella flexneri 5 str. 8401]
gi|384543660|ref|YP_005727723.1| Transcriptional regulator cbl [Shigella flexneri 2002017]
gi|415855428|ref|ZP_11530784.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2a str.
2457T]
gi|417723488|ref|ZP_12372299.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-304]
gi|417732761|ref|ZP_12381426.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2747-71]
gi|418256818|ref|ZP_12880586.1| cbl transcriptional activator [Shigella flexneri 6603-63]
gi|420342263|ref|ZP_14843748.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-404]
gi|420373121|ref|ZP_14873288.1| HTH-type transcriptional regulator cbl [Shigella flexneri 1235-66]
gi|424838380|ref|ZP_18263017.1| transcriptional regulator Cbl [Shigella flexneri 5a str. M90T]
gi|24052398|gb|AAN43597.1| transcriptional regulator cys regulon [Shigella flexneri 2a str.
301]
gi|30041693|gb|AAP17420.1| transcriptional regulator cys regulon [Shigella flexneri 2a str.
2457T]
gi|110615521|gb|ABF04188.1| transcriptional regulator cys regulon [Shigella flexneri 5 str.
8401]
gi|281601446|gb|ADA74430.1| Transcriptional regulator cbl [Shigella flexneri 2002017]
gi|313649768|gb|EFS14191.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2a str.
2457T]
gi|332759984|gb|EGJ90285.1| HTH-type transcriptional regulator cbl [Shigella flexneri 2747-71]
gi|333017357|gb|EGK36674.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-304]
gi|383467432|gb|EID62453.1| transcriptional regulator Cbl [Shigella flexneri 5a str. M90T]
gi|391267046|gb|EIQ25984.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-404]
gi|391317567|gb|EIQ74848.1| HTH-type transcriptional regulator cbl [Shigella flexneri 1235-66]
gi|397897644|gb|EJL14049.1| cbl transcriptional activator [Shigella flexneri 6603-63]
Length = 316
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 200/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+E I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEFGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG+P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR + D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRTDDAFTRKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|145633069|ref|ZP_01788801.1| cys regulon transcriptional activator [Haemophilus influenzae 3655]
gi|144986295|gb|EDJ92874.1| cys regulon transcriptional activator [Haemophilus influenzae 3655]
Length = 323
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|378697425|ref|YP_005179383.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Haemophilus influenzae 10810]
gi|301169941|emb|CBW29545.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Haemophilus influenzae 10810]
Length = 323
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDTDLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|260582129|ref|ZP_05849923.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
gi|329124069|ref|ZP_08252616.1| HTH-type transcriptional regulator CysB [Haemophilus aegyptius ATCC
11116]
gi|260094761|gb|EEW78655.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
gi|327467494|gb|EGF12992.1| HTH-type transcriptional regulator CysB [Haemophilus aegyptius ATCC
11116]
Length = 323
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|395227783|ref|ZP_10406109.1| HTH-type transcriptional regulator cbl [Citrobacter sp. A1]
gi|424728514|ref|ZP_18157119.1| hth-type transcriptional regulator cbl [Citrobacter sp. L17]
gi|394719111|gb|EJF24732.1| HTH-type transcriptional regulator cbl [Citrobacter sp. A1]
gi|422896385|gb|EKU36167.1| hth-type transcriptional regulator cbl [Citrobacter sp. L17]
Length = 316
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 195/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANILYTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQA Y+LP +IK F FP
Sbjct: 61 EPGKALLIIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQACYSLPAVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIDVLLQNGGADIGIASERLSSDPLLVAFPWFRWHHSLLVPQDHPLVK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+++PLITY +GR ++D F+ + L P I+L +SD+IKTYV L +GI
Sbjct: 181 ASPLTLESIAHWPLITYRQGITGRSRIDEAFARKGLIPDIILSAQDSDVIKTYVSLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEQEEGTLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|145635049|ref|ZP_01790755.1| transcriptional regulator CysB [Haemophilus influenzae PittAA]
gi|319776558|ref|YP_004139046.1| DNA-binding transcriptional regulator, CysB [Haemophilus influenzae
F3047]
gi|145267657|gb|EDK07655.1| transcriptional regulator CysB [Haemophilus influenzae PittAA]
gi|317451149|emb|CBY87382.1| DNA-binding transcriptional regulator, CysB [Haemophilus influenzae
F3047]
Length = 323
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|145631250|ref|ZP_01787023.1| transcriptional regulator CysB [Haemophilus influenzae R3021]
gi|319897334|ref|YP_004135530.1| DNA-binding transcriptional regulator, cysb [Haemophilus influenzae
F3031]
gi|144983177|gb|EDJ90672.1| transcriptional regulator CysB [Haemophilus influenzae R3021]
gi|317432839|emb|CBY81204.1| DNA-binding transcriptional regulator, CysB [Haemophilus influenzae
F3031]
Length = 323
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDTDLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|294141538|ref|YP_003557516.1| cys regulon transcriptional activator [Shewanella violacea DSS12]
gi|293328007|dbj|BAJ02738.1| cys regulon transcriptional activator [Shewanella violacea DSS12]
Length = 324
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGKQVISIANNILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPNIIRGFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYSDLIMLPCYHWNRSIVVTRDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++IS++++ +PL+TY F ++++ F+ L P +V ++D++KTYV L +G+
Sbjct: 181 RSNISIEDLGRFPLVTYVFGFDRESEIEKSFNSAGLEPRVVFSATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D++L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L ++ +
Sbjct: 241 GVIASMAIDPILDRDLVAIDASHLFAHSTTKIGFRKGNFLRTYMYEFIEHFAPHLTKEVV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|16273120|ref|NP_439356.1| transcriptional regulator CysB [Haemophilus influenzae Rd KW20]
gi|145639280|ref|ZP_01794886.1| cys regulon transcriptional activator [Haemophilus influenzae
PittII]
gi|260581100|ref|ZP_05848921.1| transcriptional regulator CysB [Haemophilus influenzae RdAW]
gi|1169181|sp|P45105.1|CYSB_HAEIN RecName: Full=HTH-type transcriptional regulator CysB; AltName:
Full=Cys regulon transcriptional activator
gi|1574129|gb|AAC22854.1| cys regulon transcriptional activator (cysB) [Haemophilus
influenzae Rd KW20]
gi|145271583|gb|EDK11494.1| cys regulon transcriptional activator [Haemophilus influenzae
PittII]
gi|260092229|gb|EEW76171.1| transcriptional regulator CysB [Haemophilus influenzae RdAW]
gi|309751157|gb|ADO81141.1| Cys regulon transcriptional activator [Haemophilus influenzae
R2866]
Length = 323
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDTDLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|418464382|ref|ZP_13035322.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757178|gb|EHK91334.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 323
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTLEELGKYPLITYTFGFTGVSDLDYAFNSAGILPSIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|119898618|ref|YP_933831.1| transcriptional regulator CysB-like protein [Azoarcus sp. BH72]
gi|119671031|emb|CAL94944.1| putative HTH-type transcriptional regulator cbl [Azoarcus sp. BH72]
Length = 318
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 184/293 (62%), Gaps = 1/293 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ Q R V EA+RQNFNL+ A +L+ SQPGVS+ I ELE+EL +++F R GKR+ GLT
Sbjct: 1 MNVSQLRLVLEAIRQNFNLSGVASSLFISQPGVSRQIKELEDELGVELFERRGKRLTGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PG+ ++ I+ I+ ++ LK++ F+ D G L IA+THTQARY LP + +F +FP
Sbjct: 61 PPGEMLVPVIDRILLDVRNLKQVADRFAIQDCGQLRIASTHTQARYLLPAALHDFRARFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KVKL L QG P QI E + N +AD+ + TE + L + P +W + +IVP HPL
Sbjct: 121 KVKLVLQQGTPAQIAEWVANGEADLGVSTEAIDRHRDLQAFPVREWHHAVIVPPAHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ +PL+TY F+GR +D FS L P +VL +++D+I TYVE G+
Sbjct: 181 AGELTLAALAEHPLVTYGEGFAGRSVIDAAFSAAGLAPDVVLAALDADVIVTYVEAGFGV 240
Query: 241 GIIASI-AFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLS 292
GI+A + A + + + A HLFG ++RV +++G YLR Y + +L+
Sbjct: 241 GIVAEMAARGAAARGGVAQLDARHLFGPNVARVAVRRGAYLREYALELVAMLA 293
>gi|421682721|ref|ZP_16122529.1| cbl transcriptional activator [Shigella flexneri 1485-80]
gi|404340380|gb|EJZ66804.1| cbl transcriptional activator [Shigella flexneri 1485-80]
Length = 316
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL ++ HLF + +K+G R+YV F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLNTRHLFDANTVWLGLKRGQLQRNYVCRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|398795773|ref|ZP_10555553.1| transcriptional regulator [Pantoea sp. YR343]
gi|398205246|gb|EJM92032.1| transcriptional regulator [Pantoea sp. YR343]
Length = 319
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGVLTIATTHTQARYSLPRVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E L + L + P + W + ++VP DH LL
Sbjct: 121 NVRLELNQGSPQEIVAMLLAGEADIGIASEQLVNNSSLAAFPWFSWHHSLLVPHDHELLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +S YPLITY +GR ++DR F L P IVL +SD++KTYVEL +G+
Sbjct: 181 HQPVTLASLSRYPLITYRQGITGRSRVDRAFQAAGLRPDIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A D ++L I HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACDIYEGEDLVKIDTHHLFDANTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|221134547|ref|ZP_03560852.1| transcriptional regulator CysB [Glaciecola sp. HTCC2999]
Length = 324
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 197/304 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V N N++ A++L+TSQPG+SK + LE+EL I IF R GK + ++
Sbjct: 1 MKLQQLKYIVEVVNNNLNVSATAESLFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ IM ++E +K + +E + D G L IATTHTQARYALP +IK F ++
Sbjct: 61 DAGKEVIEISREIMAKVESIKAVAREHNLPDQGKLNIATTHTQARYALPDVIKGFMDKYS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI+++ +AD AI TE L + L+ +PCY W +IV DHPL
Sbjct: 121 EVSLHMHQGTPSQISDLAAKGEADFAIATESLHLYNDLVMLPCYHWNRSVIVKKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++S+++I+ YPL+TY F+GR +LD+ F L+P IV ++D+IKTYV L +GI
Sbjct: 181 ISTLSIEDIAKYPLVTYVFGFTGRSELDQAFGKAGLSPKIVFTATDADVIKTYVRLGVGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G +LRSY+Y FI+ +P L ++ +
Sbjct: 241 GVIASMAVDHELDSDLVKIDASHLFDYSTTKIGFRKGNFLRSYMYEFIERFAPHLTKQVV 300
Query: 301 NKIL 304
K +
Sbjct: 301 EKAM 304
>gi|145627818|ref|ZP_01783619.1| HTH-type transcriptional regulator CysB [Haemophilus influenzae
22.1-21]
gi|144979593|gb|EDJ89252.1| HTH-type transcriptional regulator CysB [Haemophilus influenzae
22.1-21]
Length = 323
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+ I TE D L+ IPCY W +IV LDHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLVITTEAPYLFDDLVQIPCYWWNRAVIVTLDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|71282599|ref|YP_267943.1| transcriptional regulator CysB [Colwellia psychrerythraea 34H]
gi|71148339|gb|AAZ28812.1| cys regulon transcription activator [Colwellia psychrerythraea 34H]
Length = 324
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 189/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + N N++ A +L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVLNNNLNVSATADSLFTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ GQ ++ I+ ++EG+K + +E + D G L IATTHTQARYALP +I+ F ++
Sbjct: 61 EAGQDVIDIATQILSKVEGIKAVAREHTQPDEGKLRIATTHTQARYALPDVIQGFIKRYS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI++ +AD AI TE L + L+ +PCY W IIV DHPL
Sbjct: 121 KVSLHMSQGTPAQISDAAAKGEADFAIATESLHLYNDLVMLPCYHWNRSIIVRPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++ +I+ Y L+TY F+GR +LD F P I ++D+IKTYV L +G+
Sbjct: 181 KQNITIVDIAKYSLVTYVFGFTGRSELDAAFDAAGAKPKIAFTATDADVIKTYVRLGVGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D D +L I ASHLF + +++ ++G++LR+Y+Y FI+ +P L + +
Sbjct: 241 GVIASMAIDERIDSDLVVIDASHLFNASTTKIGFRRGSFLRAYMYDFIERFAPHLTKDIV 300
Query: 301 NKIL 304
+ +
Sbjct: 301 TRAM 304
>gi|416051563|ref|ZP_11577611.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992996|gb|EGY34373.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 323
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTLEELGKYPLITYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|372274837|ref|ZP_09510873.1| transcriptional regulator Cbl [Pantoea sp. SL1_M5]
gi|390435057|ref|ZP_10223595.1| transcriptional regulator Cbl [Pantoea agglomerans IG1]
Length = 319
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 195/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGILTIATTHTQARYSLPKVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E+L + L + P + W + ++VP H L+
Sbjct: 121 NVRLELNQGSPQEIVTMLLAGEADIGIASELLVNNSSLAAFPWFSWHHALLVPKGHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 NQPVSLSTLSRYPLITYRQGITGRSRVDRAFQTAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A ++ + L + A+HLF + + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACETEESEELVRLDATHLFDASTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|127512553|ref|YP_001093750.1| transcriptional regulator CysB [Shewanella loihica PV-4]
gi|126637848|gb|ABO23491.1| transcriptional regulator, LysR family [Shewanella loihica PV-4]
Length = 324
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++E +KK+ +E++ D G L IATT TQARYALP II+ F ++P
Sbjct: 61 PAGQQVINIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPGIIRAFIDRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L + QG P QI+E+ AD AI TE + LI +PCY W I+V DHPL
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYTDLIMLPCYHWNRSIVVTKDHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS++++ +PL+TY F ++++ F+ + P +V ++D++KTYV L +G+
Sbjct: 181 RTQISIEDLGRFPLVTYVFGFDRESEIEKAFNRAGIDPRVVFTATSADVLKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D DK+L +I ASHLF + +++ ++G +LR+Y+Y FI+ +P L + +
Sbjct: 241 GVIASMAVDPVIDKDLVAIDASHLFAHSTTKIGFRKGNFLRNYMYEFIEHFAPHLTKDIV 300
Query: 301 NK 302
K
Sbjct: 301 EK 302
>gi|387120116|ref|YP_006285999.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415763885|ref|ZP_11482222.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416033646|ref|ZP_11573114.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416046646|ref|ZP_11575764.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|429732832|ref|ZP_19267413.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans Y4]
gi|347994556|gb|EGY35826.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998896|gb|EGY39786.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|348654466|gb|EGY70089.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385874608|gb|AFI86167.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429155374|gb|EKX98056.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans Y4]
Length = 323
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFAGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVAIKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|329118054|ref|ZP_08246767.1| Cys regulon transcriptional regulator Cbl [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465942|gb|EGF12214.1| Cys regulon transcriptional regulator Cbl [Neisseria bacilliformis
ATCC BAA-1200]
Length = 378
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 196/306 (64%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA++L+TSQPGVSK I LEEEL I IFIR GKRI ++
Sbjct: 63 MKLQQLRYALEVFRHNLNVSEAAESLFTSQPGVSKQIRLLEEELGIQIFIRSGKRIVSVS 122
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L+ E I+ +I+ +K IG EF+ D G LTIA THT ARY LP ++ F +P
Sbjct: 123 QPGKAVLQMAERILHDIQNIKNIGNEFAKQDDGVLTIAATHTAARYILPPVVASFAAVYP 182
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV+L++ QG P+ + + + + AD+A+ +E+ +L IPC ++ Y +IVP HPLL
Sbjct: 183 KVRLNIRQGTPEAVRQTVSDGLADLAVTSELSEMPAELRGIPCARYHYALIVPDSHPLLD 242
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
++++ I+ YPL+TY+ +F + R F+ + P + L +SD++KTYV L +
Sbjct: 243 HRGALTIALIAGYPLVTYEFAFDKHSGVARAFAKAGVAKPDVALSVADSDVLKTYVRLGL 302
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+GIIA A+D D+ L + S L S +I++ +YLR Y+Y F++LL+P L +
Sbjct: 303 GVGIIAKAAYDPQADRGLTLVDVSQLIEPCDSGIIMRGDSYLRGYIYEFVELLNPNLTKA 362
Query: 299 FINKIL 304
++++L
Sbjct: 363 RLDQLL 368
>gi|416061857|ref|ZP_11581301.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|444333500|ref|ZP_21149286.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347997468|gb|EGY38460.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|443551631|gb|ELT59414.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 323
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVAIKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|417702641|ref|ZP_12351755.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-218]
gi|333002953|gb|EGK22508.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-218]
Length = 316
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 199/302 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+E I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEFGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG+P++I +++N +ADI I +E LS +L++ P + W + ++VPLDHPL
Sbjct: 121 EVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR + D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRTDDAFTRKGLPADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++ + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLEFCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|251790290|ref|YP_003005011.1| transcriptional regulator CysB-like protein [Dickeya zeae Ech1591]
gi|247538911|gb|ACT07532.1| transcriptional regulator, LysR family [Dickeya zeae Ech1591]
Length = 317
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 198/300 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS D G L IATTHTQARY+LP+IIK F +P
Sbjct: 61 EPGKELLVMAERILNDANHIRRLANLFSDNDVGQLVIATTHTQARYSLPEIIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I TE L + L + P Y+W + ++VP H L L
Sbjct: 121 QVQLVLNQGTPDEIVAMLESGEADIGIATEQLMNVNSLAAFPWYRWHHAVLVPEGHTLAL 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L +S PLITY +GR ++DR F+ LTP+I + +SD+IKTYVEL +G+
Sbjct: 181 ASPITLDTLSEVPLITYRQGITGRSRIDRAFAAAGLTPHISISAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A ++FD+ RD L + A HLF + +K+G R+Y++ FI+L +P+L++ I
Sbjct: 241 GIVADMSFDAVRDPGLVRLDAGHLFDDNTVWLGLKRGQLQRNYIWKFIQLCNPELSQDDI 300
>gi|1004100|gb|AAA99929.1| significant sequence similarity to ORF2 of Klebsiella aerogenes,
accession number LO1114.; putative [Escherichia coli]
Length = 316
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N + DI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGERDIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|343519349|ref|ZP_08756332.1| transcriptional regulator CysB [Haemophilus pittmaniae HK 85]
gi|343392715|gb|EGV05277.1| transcriptional regulator CysB [Haemophilus pittmaniae HK 85]
Length = 323
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G+K + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIVAIARELLVKAQGIKAVANEYTQPNHGVLRIATTNTQARYMLPSVIERFSKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D LI +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKDLTIEELGQYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I A HLF +++++ K T+LR+Y+Y FI+ SP L R +
Sbjct: 241 GIMASMAH-TEADTDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRNMV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|52425094|ref|YP_088231.1| transcriptional regulator CysB [Mannheimia succiniciproducens
MBEL55E]
gi|52307146|gb|AAU37646.1| LysR protein [Mannheimia succiniciproducens MBEL55E]
Length = 323
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 196/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKTVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + EF+ + G L IAT++TQARY LP +I+ F+ Q+P
Sbjct: 61 PAGKKIVAIARELLVKTQAIKAVANEFTQPNHGVLRIATSNTQARYMLPAVIERFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P Q+ + + + + D+AI TE D ++ +PCY W IIV DHPL
Sbjct: 121 NVSLHVHQGSPNQLYDALLSSEVDLAITTEAQYLFDDVVLLPCYMWNRSIIVKADHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+ ++++++ YPLITY F+G LD+ F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 LSHVTIEDLGKYPLITYTFGFTGVSDLDQAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A ++ D +L I ASHLF ++++++ K T+LR+Y+Y FI SP L R +
Sbjct: 241 GIIASMAH-TDADTDLIRIDASHLFKSSMTQIAFKHSTFLRNYMYDFINYFSPHLTRAKV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|68249746|ref|YP_248858.1| transcriptional regulator CysB [Haemophilus influenzae 86-028NP]
gi|229844845|ref|ZP_04464983.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
gi|68057945|gb|AAX88198.1| HTH-type transcriptional regulator CysB [Haemophilus influenzae
86-028NP]
gi|229812226|gb|EEP47917.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
Length = 323
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M +HQ R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVSPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAHTA-LDADLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLIRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|342904897|ref|ZP_08726693.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21621]
gi|341952353|gb|EGT78883.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21621]
Length = 323
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIILIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF ++++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPSDTDLVAIDASHLFRSSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|381404069|ref|ZP_09928753.1| transcriptional regulator Cbl [Pantoea sp. Sc1]
gi|380737268|gb|EIB98331.1| transcriptional regulator Cbl [Pantoea sp. Sc1]
Length = 319
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 195/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPKIIK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGILTIATTHTQARYSLPKIIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +AD+ I +E+L + L + P + W + ++VP H L+
Sbjct: 121 NVRLELNQGSPQEIVSMLLAGEADVGIASEMLVNNSSLAAFPWFSWHHALLVPKGHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S +PLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 NQPVSLSTLSRHPLITYRQGITGRSRVDRAFQSAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A ++ + L I A+HLF + + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACETEESEELVRIDATHLFDASTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|419802966|ref|ZP_14328144.1| cys regulon transcriptional activator CysB [Haemophilus
parainfluenzae HK262]
gi|419844708|ref|ZP_14367995.1| cys regulon transcriptional activator CysB [Haemophilus
parainfluenzae HK2019]
gi|385188762|gb|EIF36235.1| cys regulon transcriptional activator CysB [Haemophilus
parainfluenzae HK262]
gi|386416634|gb|EIJ31126.1| cys regulon transcriptional activator CysB [Haemophilus
parainfluenzae HK2019]
Length = 323
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 195/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + E++ + G L IATT+TQARY LP +++ F+ Q+P
Sbjct: 61 PAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D LI +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALISGEVDLAITTEAPYIFDDLIQLPCYLWNRSVIVKPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKNLTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + DK+L +I A HLF +++++ K T+LR+Y+Y FI+ SP L R +
Sbjct: 241 GIMASMAH-TPVDKDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRPMV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|440230423|ref|YP_007344216.1| transcriptional regulator [Serratia marcescens FGI94]
gi|440052128|gb|AGB82031.1| transcriptional regulator [Serratia marcescens FGI94]
Length = 321
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 197/295 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R+N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 5 MNFQQLKIIRESARRNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS+ D G L IATTHTQARY+LP++IKEF +P
Sbjct: 65 EPGKELLVVAERILNDANNIRRLADVFSSNDDGQLHIATTHTQARYSLPRVIKEFRALYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG P++I M+ + +ADI I +E L D L + P Y+W + I+VP +HPL
Sbjct: 125 RVRVVLNQGTPEEIAAMLASGEADIGIASERLINDDALAAFPYYRWHHAILVPENHPLTQ 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++S PLITY +GR +LD F LTP I L +SD+IKTYVEL +G+
Sbjct: 185 AGPLTLEQLSTQPLITYRQGITGRSRLDAAFKAAGLTPDIALSAQDSDVIKTYVELGLGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
G++A ++++ RD+ L S++A HLF + +K+ R+Y + FI+L +P L
Sbjct: 245 GVLADMSYEKERDRGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTL 299
>gi|416069796|ref|ZP_11583392.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|416074960|ref|ZP_11584808.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344133|ref|ZP_21152435.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|347999549|gb|EGY40370.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348006575|gb|EGY46984.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544725|gb|ELT54661.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 323
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|292488659|ref|YP_003531543.1| HTH-type transcriptional regulator CysB [Erwinia amylovora
CFBP1430]
gi|292899818|ref|YP_003539187.1| LysR family transcriptional regulator [Erwinia amylovora ATCC
49946]
gi|428785600|ref|ZP_19003091.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
ACW56400]
gi|291199666|emb|CBJ46786.1| LysR-family transcriptional regulator [Erwinia amylovora ATCC
49946]
gi|291554090|emb|CBA21223.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
CFBP1430]
gi|426277162|gb|EKV54889.1| HTH-type transcriptional regulator cysB [Erwinia amylovora
ACW56400]
Length = 318
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F + +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIKAFRVLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +AD+ I +E L + L + P + W + ++VP H L
Sbjct: 121 NVRLELNQGSPQEIVSMLMTGEADVGIASEQLVNNPALAAFPWFSWHHALLVPQGHELQQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L IVL +SD++KTYVEL +G+
Sbjct: 181 QQPVSLAALSRYPLITYRQGVTGRSRVDRAFQDASLQADIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A +L + ASHLF T + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACQLEPHSSLHRLDASHLFETNTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|325578259|ref|ZP_08148394.1| HTH-type transcriptional regulator CysB [Haemophilus parainfluenzae
ATCC 33392]
gi|325159995|gb|EGC72124.1| HTH-type transcriptional regulator CysB [Haemophilus parainfluenzae
ATCC 33392]
Length = 327
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 195/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 5 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSIT 64
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + E++ + G L IATT+TQARY LP +++ F+ Q+P
Sbjct: 65 PAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYP 124
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D LI +PCY W +IV DHPL
Sbjct: 125 DVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAK 184
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 185 VKNLTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 244
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + DK+L +I A HLF +++++ K T+LR+Y+Y FI+ SP L R +
Sbjct: 245 GIMASMA-HTPADKDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLMRPMV 303
Query: 301 NK 302
K
Sbjct: 304 EK 305
>gi|304413782|ref|ZP_07395226.1| transcriptional dual regulator [Candidatus Regiella insecticola
LSR1]
gi|304283873|gb|EFL92267.1| transcriptional dual regulator [Candidatus Regiella insecticola
LSR1]
Length = 324
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 190/304 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ L+TSQPG+SK I LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVHHNLNVSSTAQGLFTSQPGISKQIKMLEDELGILIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ +I+ +K + E++ + G+L IATT+TQARY LPKIIK F +P
Sbjct: 61 PAGKEIIAIAGEILSKIDAIKAVAGEYTCPNKGSLCIATTYTQARYVLPKIIKSFIKHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + AD AI TE L D LI +PCY W ++V D PL
Sbjct: 121 CVSLHMHQGSPVQIAQAVVKGDADFAITTEALHLYDDLIMLPCYHWNRGVVVRQDDPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ E++ YP++TY L F+GR LD F LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKNLTITELAAYPIVTYTLGFTGRATLDSAFKRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA++A + +D +L ++ A +F + +++ ++ T+LRSY+Y FI+ +P L R +
Sbjct: 241 GIIANMAVNPQQDPDLVTVEAKEIFTCSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDRV 300
Query: 301 NKIL 304
++ L
Sbjct: 301 DRAL 304
>gi|365967716|ref|YP_004949278.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365746629|gb|AEW77534.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 320
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|366157351|ref|ZP_09457213.1| transcriptional regulator Cbl [Escherichia sp. TW09308]
Length = 316
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ + F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLAELFTNDTSGVLTIATTHTQARYSLPDVIKVFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS +L++ P ++W + ++VP++HPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGGADIGIASERLSNDLQLVAFPWFRWHHSLLVPVNHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFTRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWHFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|432372632|ref|ZP_19615677.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE11]
gi|430897125|gb|ELC19352.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE11]
Length = 316
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 201/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ + F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLAELFTNDTSGVLTIATTHTQARYSLPDVIKVFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS +L++ P ++W + ++VP++HPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGGADIGIASERLSNDLQLVAFPWFRWHHSLLVPVNHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYV L +GI
Sbjct: 181 ITPLTLESIAKWPLITYRQGITGRSRIDDAFTRKGLLADIVLSAQDSDVIKTYVALGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + ++NL + HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWHFLELCNAGLSVEDI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|238786997|ref|ZP_04630797.1| HTH-type transcriptional regulator cbl [Yersinia frederiksenii ATCC
33641]
gi|238724785|gb|EEQ16425.1| HTH-type transcriptional regulator cbl [Yersinia frederiksenii ATCC
33641]
Length = 318
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 201/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS D+G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLTVAERMLNDANQIRRLADVFSNNDSGQLHIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QG P++I M+++ +ADI I TE+L + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGTPQEIAAMLQSGEADIGIATELLLSDESVAVFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ I+L+ +S PLITY +GR +LD F L P I L +SD+IKTYVEL +G+
Sbjct: 181 ESHITLETLSRLPLITYRQGITGRSRLDNAFKNAGLIPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RDK L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDKGLVRLNAEHLFDANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|429091751|ref|ZP_19154412.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter dublinensis 1210]
gi|429096802|ref|ZP_19158908.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter dublinensis 582]
gi|426283142|emb|CCJ85021.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter dublinensis 582]
gi|426743608|emb|CCJ80525.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter dublinensis 1210]
Length = 317
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/296 (46%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DH L
Sbjct: 121 DVRLELIQGTPQEIESLLQSGTADIGIASERLSADPGLVAYPWFRWHHSLLVPNDHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N ++L+EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ANPLTLEEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A A D+ + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQASDTREESGLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNNGLS 296
>gi|209695183|ref|YP_002263112.1| transcriptional regulator CysB [Aliivibrio salmonicida LFI1238]
gi|208009135|emb|CAQ79374.1| HTH-type transcriptional regulator CysB [Aliivibrio salmonicida
LFI1238]
Length = 324
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V + N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHSLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFERSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I++ I+ ++ +K + E + + G L I TTHTQARYALP +IK FT ++P
Sbjct: 61 PSGEEIVKISREILSRVDSIKAVAGEHTHPEKGLLNITTTHTQARYALPDVIKGFTSRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P Q+++ I AD AI TE L I +PCY W I+V DHPL
Sbjct: 121 QVSLHMHQGTPTQMSDAIAKGTADFAIATEALHLYHDAIMLPCYHWNRSIVVNKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ +++ Y L+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKHVTVHDLAAYELVTYVFGFTGRSELDSAFNKAGLTPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D RD +L +I ASH+F + + + K+G++L+SY+Y F++ +P L R +
Sbjct: 241 GVIASMAMDPERDSDLVAIDASHIFDASTTTIGFKRGSFLKSYMYDFMERFAPHLTRPIV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|53803372|ref|YP_114882.1| transcriptional regulator CysB [Methylococcus capsulatus str. Bath]
gi|53757133|gb|AAU91424.1| cys regulon transcriptional activator [Methylococcus capsulatus
str. Bath]
Length = 324
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 197/306 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E + + N++ A AL+TSQPG+SK I LEEEL I IF R GK + +T
Sbjct: 1 MKLQQLRYIWEVSQHDLNVSSTADALFTSQPGISKQIKLLEEELGISIFARSGKHLTEIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ I+ +++ ++ + +EF G+L+IATTHTQARYALP +++EF ++P
Sbjct: 61 PAGKYVVELAGQILSKVQDIRSVAQEFRDNRVGSLSIATTHTQARYALPPVVREFMQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+KL++ QG P QI E DIAI TE + L+ +PCY+W + +VP HPL
Sbjct: 121 GIKLNMHQGTPVQIAEEASRGLVDIAIATEAIELFGNLVMLPCYRWNRIALVPKGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+++ +PL+TY F+GR LD+ F+ + P + L +++D+IKTYV L +G+
Sbjct: 181 KPGLTLEDLGEHPLVTYVFGFTGRSHLDQAFNRAGIKPRLALTAVDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A++ D +L ++ ASHLF ++++ + +++ ++R ++Y FI+L +P L R+ +
Sbjct: 241 GIIARMAYNPETDADLVALDASHLFESSVTNIGLRRDIFVRGFLYDFIELFAPHLTREVV 300
Query: 301 NKILNN 306
++ L+
Sbjct: 301 DRALST 306
>gi|307130321|ref|YP_003882337.1| LysR family transcriptional regulator [Dickeya dadantii 3937]
gi|306527850|gb|ADM97780.1| transcriptional regulator of cysteine biosynthesis (LysR family)
[Dickeya dadantii 3937]
Length = 317
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 197/300 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS D G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVMAERILNDANHIRRLANLFSDNDVGQLVIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I TE L + L + P Y+W + I+VP H L
Sbjct: 121 QVQLVLNQGTPDEIVAMLESGEADIGIATEQLMNVNSLAAFPYYRWHHAILVPEGHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L ++S PLITY +GR ++DR F+ LTP+I + +SD+IKTYVEL +G+
Sbjct: 181 EPAVTLDKLSAVPLITYRQGITGRSRIDRAFAAAGLTPHISISAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A ++FD+ RD L + A HLF + + +K+G R+Y + FI+L +P+L + I
Sbjct: 241 GIVADMSFDATRDPGLVRLDARHLFEASTVWLGLKRGQLQRNYTWKFIQLCNPELTQDDI 300
>gi|156933409|ref|YP_001437325.1| transcriptional regulator Cbl [Cronobacter sakazakii ATCC BAA-894]
gi|389840458|ref|YP_006342542.1| transcriptional regulator Cbl [Cronobacter sakazakii ES15]
gi|417791549|ref|ZP_12438996.1| transcriptional regulator Cbl [Cronobacter sakazakii E899]
gi|424800176|ref|ZP_18225718.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter sakazakii 696]
gi|429116109|ref|ZP_19177027.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter sakazakii 701]
gi|449307690|ref|YP_007440046.1| transcriptional regulator Cbl [Cronobacter sakazakii SP291]
gi|156531663|gb|ABU76489.1| hypothetical protein ESA_01225 [Cronobacter sakazakii ATCC BAA-894]
gi|333954364|gb|EGL72219.1| transcriptional regulator Cbl [Cronobacter sakazakii E899]
gi|387850934|gb|AFJ99031.1| transcriptional regulator Cbl [Cronobacter sakazakii ES15]
gi|423235897|emb|CCK07588.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter sakazakii 696]
gi|426319238|emb|CCK03140.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter sakazakii 701]
gi|449097723|gb|AGE85757.1| transcriptional regulator Cbl [Cronobacter sakazakii SP291]
Length = 317
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/296 (46%), Positives = 199/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIESLLQSGTADIGIASERLSADPGLVAYPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N ++L+EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ANPLTLEEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A A + + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQASEPHEESLLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|332290313|ref|YP_004421165.1| transcriptional regulator CysB [Gallibacterium anatis UMN179]
gi|330433209|gb|AEC18268.1| transcriptional regulator CysB [Gallibacterium anatis UMN179]
Length = 323
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 195/297 (65%), Gaps = 1/297 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N+T+AAK+LYTSQPG+SK + LE+EL + IF R+GK I+ LT
Sbjct: 1 MKLQQLRYIVEIANNNLNITDAAKSLYTSQPGISKQVKLLEDELGLPIFERNGKHIQSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K I E D G L IATT+TQARY LP+++K+F ++P
Sbjct: 61 PTGEKIIAIARELLVKEQSIKAIADEHKRPDVGTLRIATTNTQARYKLPEVVKKFVKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P+QI E++ + + D+AI+TE + I +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPQQIYELLLSGEIDLAIITEAQYLFEDAILLPCYMWNRSVIVKKDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+GR LD F+ + + P V ++D+IKTYV L +G+
Sbjct: 181 VEHLTIEELGKYPLVTYIFGFTGRSDLDYAFNREGILPNTVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GI+AS+A+ S++D +L +I ASHLF +++++ K+G++LR Y Y FI + +P L R
Sbjct: 241 GIMASMAY-SDQDNDLVAIDASHLFKASMTQIAFKKGSFLRRYTYDFINIFAPHLTR 296
>gi|238751524|ref|ZP_04613015.1| HTH-type transcriptional regulator cbl [Yersinia rohdei ATCC 43380]
gi|238710242|gb|EEQ02469.1| HTH-type transcriptional regulator cbl [Yersinia rohdei ATCC 43380]
Length = 318
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 205/296 (69%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+I+IR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIYIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E ++ + ++++ FS ++G L IATTHTQARY+LP++IKEF + +P
Sbjct: 61 EPGKELLILAERMLNDANQIRRLADVFSNNESGQLNIATTHTQARYSLPRVIKEFRLLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+VKL + QG+P++I+ M+++ +ADI I TE+L + + + P Y+W + I+VP +HPL
Sbjct: 121 QVKLVISQGSPQEISAMLQSGEADIGIATELLMSDESVAAFPYYRWHHAIVVPENHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N+I+L+ +S PLITY +GR +LD F L P I L ++D+IKTYVEL MG+
Sbjct: 181 ENNITLEILSRLPLITYRQGITGRSRLDDAFKNAGLVPDIALSAQDADVIKTYVELGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++++++RD+ L ++A HLF + +K+G R++++ FI+L +P L+
Sbjct: 241 GILADMSYEAHRDQGLVRLNAEHLFEANTVWLGLKRGQLQRNFIWFFIQLCNPTLS 296
>gi|259908119|ref|YP_002648475.1| transcriptional regulator Cbl [Erwinia pyrifoliae Ep1/96]
gi|387870946|ref|YP_005802319.1| HTH-type transcriptional regulator cysB [Erwinia pyrifoliae DSM
12163]
gi|224963741|emb|CAX55239.1| Transcriptional regulator cys regulon [Erwinia pyrifoliae Ep1/96]
gi|283478032|emb|CAY73948.1| HTH-type transcriptional regulator cysB [Erwinia pyrifoliae DSM
12163]
Length = 318
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + ++EA R FNLTE A AL+TSQ GVS+ I +LE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIKEAARCEFNLTEVANALFTSQSGVSRHIRDLEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F + +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIKAFRVLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG+P++I M+ +AD+ I +E + + L + P + W + ++VP H L
Sbjct: 121 QVRLELNQGSPQEIVSMLMTGEADVGIASEQVVNNPALAAFPWFSWHHALLVPQGHELQQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L IVL +SD++KTYVEL +G+
Sbjct: 181 QQPVSLAALSRYPLITYRQGVTGRSRVDRAFQAANLQADIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A L + ASHLF T + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACQLEPHSLLNRLDASHLFETNTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|398800582|ref|ZP_10559850.1| transcriptional regulator [Pantoea sp. GM01]
gi|398094975|gb|EJL85326.1| transcriptional regulator [Pantoea sp. GM01]
Length = 361
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 43 VNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 102
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F +P
Sbjct: 103 EPGKALLTIAERILDEAGKVRRLADVFTNETSGVLTIATTHTQARYSLPRVIKAFRQLYP 162
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E L + L + P + W + ++VP DH LL
Sbjct: 163 NVRLELNQGSPQEIVAMLLAGEADIGIASEQLVNNSSLAAFPWFSWHHSLLVPHDHELLQ 222
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L +S YPLITY +GR ++DR F L P IVL +SD++KTYVEL +G+
Sbjct: 223 HQPVTLASLSRYPLITYRQGITGRSRVDRAFQAAGLRPDIVLSAQDSDVVKTYVELGLGV 282
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A D ++L I HLF + +K+G R+YV+ F++L + L+ + I
Sbjct: 283 GILADQACDIYEGEDLVKIDTHHLFDANTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 342
Query: 301 NK 302
+
Sbjct: 343 KR 344
>gi|253989555|ref|YP_003040911.1| hth-type transcriptional regulator cysb (cys regulon transcriptiona
activator) [Photorhabdus asymbiotica]
gi|253781005|emb|CAQ84167.1| hth-type transcriptional regulator cysb (cys regulon transcriptiona
activator) [Photorhabdus asymbiotica]
Length = 324
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 189/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +I+ ++ + E + + G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIDAIRSVASEHTYPNRGSLYIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 QVSLHMHQGSPTQIAEAVCKGSADFAIATEALHLYEDLIMLPCYHWNRTLVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++S++E++ Y L+TY F+GR +LD F L P IV ++D+IKTYV L +G+
Sbjct: 181 KENVSIEELAEYQLVTYTFGFTGRSELDVAFDKVCLKPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D +DK+L I FG + +++ ++ ++LRSY+Y F+ +P L R +
Sbjct: 241 GVIASMAVDPVQDKDLICIDMRDKFGYSTTKIGFRRSSFLRSYMYDFMWRFAPHLTRDVV 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|345430099|ref|YP_004823219.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Haemophilus parainfluenzae
T3T1]
gi|301156162|emb|CBW15633.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Haemophilus parainfluenzae
T3T1]
Length = 323
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + E++ + G L IATT+TQARY LP +++ F+ Q+P
Sbjct: 61 PAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D LI +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 VKELTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I A HLF +++++ K T+LR+Y+Y FI+ SP L R +
Sbjct: 241 GIMASMAH-TPADTDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRPMV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|385788704|ref|YP_005819813.1| transcriptional regulator Cbl [Erwinia sp. Ejp617]
gi|310767976|gb|ADP12926.1| transcriptional regulator Cbl [Erwinia sp. Ejp617]
Length = 318
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + ++EA R FNLTE A AL+TSQ GVS+ I +LE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIKEAARCEFNLTEVANALFTSQSGVSRHIRDLEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F + +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIKAFRVLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +AD+ I +E + + L + P + W + ++VP H L
Sbjct: 121 HVRLELNQGSPQEIVSMLMTGEADVGIASEQVVNNPALAAFPWFSWHHALLVPQGHELQQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L IVL +SD++KTYVEL +G+
Sbjct: 181 QQPVSLAALSRYPLITYRQGVTGRSRVDRAFQAANLQADIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A L + ASHLF T + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACQLEPHSLLNRLDASHLFETNTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417839078|ref|ZP_12485285.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M19107]
gi|341955176|gb|EGT81638.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M19107]
Length = 323
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 192/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPSDTDLVAIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|417843416|ref|ZP_12489491.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21127]
gi|341949895|gb|EGT76494.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21127]
Length = 323
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 192/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPADTDLVAIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|373466767|ref|ZP_09558078.1| transcriptional regulator CysB [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371760025|gb|EHO48730.1| transcriptional regulator CysB [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 323
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 192/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYMLPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPSDTDLVAIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|416082479|ref|ZP_11586603.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444347842|ref|ZP_21155644.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348010839|gb|EGY50853.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|443548073|gb|ELT57424.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 320
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 192/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLRYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L + +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTHENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|419839924|ref|ZP_14363324.1| transcriptional regulator CysB [Haemophilus haemolyticus HK386]
gi|386908662|gb|EIJ73349.1| transcriptional regulator CysB [Haemophilus haemolyticus HK386]
Length = 323
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 191/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALYTSQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAVADEYTQPNHGVLRIATTNTQARYILPSVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D LI +PCY W +IV DHPL+
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPHLYDDLIQLPCYWWNRSVIVKPDHPLVN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ + YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 AEKLTIEALGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + DK+L +I ASHLF +++ + K T+LR+Y+Y F+ SP L R +
Sbjct: 241 GIMASMAH-TEFDKDLVAIDASHLFRASMTNIAFKHSTFLRNYMYDFMAYFSPHLTRPVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|161870688|ref|YP_001599861.1| transcriptional regulator CysB-like protein [Neisseria meningitidis
053442]
gi|161596241|gb|ABX73901.1| putative cysteine transcriptional regulatory protein, activator
[Neisseria meningitidis 053442]
Length = 291
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 195/281 (69%), Gaps = 2/281 (0%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
++TSQPG+SK I LEEE+ I IFIR GKR+ +++PG+ +L E I+++++ +K IG
Sbjct: 1 MFTSQPGISKQIKLLEEEIGIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGS 60
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
EF+ D+G+LT+ATTHTQARYALP I+ +F ++PKV L++ QG+P I +M+ + ++D+
Sbjct: 61 EFTGQDSGSLTVATTHTQARYALPLIVADFVKRYPKVNLTIKQGSPAAIAQMVTSGESDL 120
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL-LLNSISLKEISNYPLITYDLSFSGR 204
AIVTE + +L + CY W + +IVP DHPLL N + +++++ +PLITY+ +F+
Sbjct: 121 AIVTERIDDHPELGRLSCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAG 180
Query: 205 IKLDREFSLQKL-TPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASH 263
+ R FS +L P + L ++D++KTYV L +G+G++A +A++ + D +L+ + A+H
Sbjct: 181 SSIARAFSKARLEQPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAH 240
Query: 264 LFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINKIL 304
LF + + + ++ TYLR Y Y FI+ +P L R+ +++IL
Sbjct: 241 LFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTREKVDRIL 281
>gi|244538912|dbj|BAH82955.1| DNA-binding transcriptional dual regulator [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 324
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 191/301 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK I LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAQGLYTSQPGISKQIRMLEDELGVQIFARTGKHLTQIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +++ +K + E++ D G+L +ATTHTQ+RY LP++IK F ++P
Sbjct: 61 PVGKDIIRVAREVLLKVDAIKSVAGEYTGPDKGSLYVATTHTQSRYILPQVIKGFISRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + AD AI TE L + L+ +PCY W I+V +HPL
Sbjct: 121 YVSLHMHQGSPIQIAETVLKGNADFAIATESLYLYNDLVMLPCYHWNRTIVVTPNHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
IS+++++ +PL+TY+ F+GR +LD F+ LTP I ++D+IKTYV L +G+
Sbjct: 181 KQQISIQDLAQFPLVTYNFGFTGRSELDAAFNQVGLTPRIAFTATDADVIKTYVCLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IASIA + D NL I AS +F + +++ ++ T+LR Y+Y FI+ +P L R+ +
Sbjct: 241 GVIASIAINPVSDINLVFIKASDIFIKSTTKIGFRRTTFLRGYMYDFIQRFAPHLTREVV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|290475301|ref|YP_003468189.1| LysR family transcriptional regulator [Xenorhabdus bovienii
SS-2004]
gi|289174622|emb|CBJ81416.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR familiy)
[Xenorhabdus bovienii SS-2004]
Length = 324
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 187/304 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIESIRSVASEHTYPDRGSLYIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W ++V DHPL
Sbjct: 121 NVSLHMHQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRSVVVTKDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E++ YP++TY F+GR +LD F L P IV ++D+IKTYV L +G+
Sbjct: 181 RQNVTIEELAEYPIVTYTFGFTGRSELDVAFDQAGLKPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A + +D +L I F + +++ ++ ++LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVEPVQDSDLVRIDMRDKFSYSTTKIGFRRSSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|59712097|ref|YP_204873.1| transcriptional regulator CysB [Vibrio fischeri ES114]
gi|197335861|ref|YP_002156302.1| transcriptional regulator CysB [Vibrio fischeri MJ11]
gi|423686256|ref|ZP_17661064.1| transcriptional regulator CysB [Vibrio fischeri SR5]
gi|59480198|gb|AAW85985.1| DNA-binding transcriptional dual regulator,
O-acetyl-L-serine-binding [Vibrio fischeri ES114]
gi|197317351|gb|ACH66798.1| HTH-type transcriptional regulator CysB [Vibrio fischeri MJ11]
gi|371494324|gb|EHN69922.1| transcriptional regulator CysB [Vibrio fischeri SR5]
Length = 324
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 187/302 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E V + N++ A++LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLKYIVEVVNHSLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFERSGKHLTRVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I++ I+ +E +K + E + + G L I TTHTQARYALP +IK F ++P
Sbjct: 61 PSGEEIVKISREILSRVESIKSVAGEHTHPEKGTLNITTTHTQARYALPDVIKGFKNRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG P Q+++ I AD AI TE L I +PCY W I+V DHPL
Sbjct: 121 AVSLHMHQGTPSQMSDAIAKGTADFAIATEALHLYQDAIMLPCYHWNRSIVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L +++++++ + L+TY F+GR LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 LQQVTIEDLAAFELVTYVFGFTGRSALDSAFNKAGLKPKIVFTATDADVIKTYVRLGIGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A D RD +L +I ASH+F + + + K+G++L+SY++ F++ +P L R +
Sbjct: 241 GVIASMAMDEERDSDLVAIDASHIFDASTTTIGFKRGSFLKSYMFDFMERFAPHLTRPIV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|261867924|ref|YP_003255846.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415768851|ref|ZP_11484005.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416107647|ref|ZP_11590614.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346591|ref|ZP_21154555.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261413256|gb|ACX82627.1| HTH-type transcriptional regulator CysB (Cys regulon
transcriptionalactivator) [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348005196|gb|EGY45685.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348657697|gb|EGY75283.1| transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443541409|gb|ELT51836.1| HTH-type transcriptional regulator CysB [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 323
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 192/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q +V E V QN+N+TEAA ALYTSQPG+SK + LE EL ++IF RHGK I+GLT
Sbjct: 1 MKFQQLSYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++ ++ + E++ D G L IATT+TQARY LP +++ F ++P
Sbjct: 61 PAGKKIVGISRELMVKMQAIRSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI +++ + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVLLPCYMWNRSVIVKSDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+ YPLITY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K G +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAH-TPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|416891631|ref|ZP_11923178.1| transcriptional regulator CysB [Aggregatibacter aphrophilus ATCC
33389]
gi|347815179|gb|EGY31819.1| transcriptional regulator CysB [Aggregatibacter aphrophilus ATCC
33389]
Length = 323
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 194/302 (64%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QNFN+TEAA AL+TSQPG+SK + LE EL ++IF R+GK ++GLT
Sbjct: 1 MKFQQLRYVVEIVNQNFNVTEAANALFTSQPGISKQVRLLENELGLEIFERNGKHMKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++G++ + E++ D G L IATT+TQARY LP +++ F+ ++P
Sbjct: 61 PAGKKIVAISRELMAKMQGIRSVADEYTKPDHGVLRIATTNTQARYMLPSVVERFSKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSGEVDLAITTEAQYLFDGVVLLPCYLWNRSVIVKPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CENLTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMA-HTPADTDLVALKADHLFRASMTQIAFKHSAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|113461176|ref|YP_719245.1| transcriptional regulator CysB [Haemophilus somnus 129PT]
gi|112823219|gb|ABI25308.1| transcriptional regulator [Haemophilus somnus 129PT]
Length = 323
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + QFR++ E V QN N+T+AA AL+TSQPG+SK + LE+EL ++IF R+GK I+GLT
Sbjct: 1 MKIQQFRYIVEIVNQNMNVTDAANALFTSQPGISKQVRLLEDELGLEIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ ++ + + +K I E++ + G L IATT+TQARY LP +I+ F+ Q+P
Sbjct: 61 PAGARIVAVARELLVKTQNIKAIANEYTRPNCGVLRIATTNTQARYMLPSVIRRFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + + D AI TE D +I +PCY W +IV +HPL
Sbjct: 121 EVSLHIHQGSPTQIYDALLFGEVDFAITTEAQYLFDDVILLPCYMWNRSVIVKPEHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ + YPL+TY F+G LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 CKKLTIEALGQYPLVTYTFGFTGGSDLDYAFNSAGLLPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ ASHLF ++++++ K G +LR+Y+Y FI+ SP L R +
Sbjct: 241 GIMASMA-HTEADNDLVALDASHLFRSSMTQIAFKHGIFLRNYMYDFIQYFSPHLTRTLV 299
Query: 301 NK 302
+
Sbjct: 300 EQ 301
>gi|335419726|ref|ZP_08550774.1| transcriptional regulator CysB [Salinisphaera shabanensis E1L3A]
gi|334896053|gb|EGM34209.1| transcriptional regulator CysB [Salinisphaera shabanensis E1L3A]
Length = 326
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 186/304 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q ++ E ++ N+T AA+AL+TSQPGVSK I LEEEL + +F R+GK + +T
Sbjct: 1 MKLRQLVYINEVAKRRLNITAAAEALHTSQPGVSKQIRLLEEELGVLVFERNGKHLDRIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G IL + I+ E+E + + EF+ D G+L +ATTHTQARYALP ++ F ++P
Sbjct: 61 PAGARILETTRRILSEVENITRTASEFADADRGSLCVATTHTQARYALPPVVDAFRREYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG P QI AD AI TE L D+L+ +PCY W ++VP DHPL
Sbjct: 121 EVSLHLNQGAPPQIAGWAAAGDADFAIATEALEHFDELVMLPCYHWNRCVLVPRDHPLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ L +++ P++TY F+GR LD F + TP +VL +++D+IKTYV L +G+
Sbjct: 181 TPRLELAKLAEQPIVTYTFGFTGRSHLDAAFEAEGRTPNVVLTAVDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A+D D +L + ASHLF + + + + +LR Y+ FI++ +P L I
Sbjct: 241 GVIANMAYDPVADADLVRLDASHLFAASTTHIGFRHNLFLRGYMRRFIEIFAPHLTSATI 300
Query: 301 NKIL 304
++ L
Sbjct: 301 DEAL 304
>gi|429087186|ref|ZP_19149918.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter universalis NCTC 9529]
gi|426506989|emb|CCK15030.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter universalis NCTC 9529]
Length = 317
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 199/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIESLLQSGTADIGIASERLSADPALVAYPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ASPLTLEEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A A + + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQASEPHEESLLTRLDTKHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|260598481|ref|YP_003211052.1| transcriptional regulator Cbl [Cronobacter turicensis z3032]
gi|260217658|emb|CBA31981.1| HTH-type transcriptional regulator cbl [Cronobacter turicensis
z3032]
Length = 317
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 202/302 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIESLLQSGTADIGIASERLSADPGLVAYPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ASPLTLEEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A A + + + L + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQASEPHEESLLARLDTKHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KQ 302
>gi|170717765|ref|YP_001784831.1| CysB family transcripitonal regulator [Haemophilus somnus 2336]
gi|168825894|gb|ACA31265.1| transcriptional regulator, LysR family [Haemophilus somnus 2336]
Length = 323
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + QFR++ E V QN N+T+AA AL+TSQPG+SK + LE+EL ++IF R+GK I+GLT
Sbjct: 1 MKIQQFRYIVEIVNQNMNVTDAANALFTSQPGISKQVRLLEDELGLEIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ ++ + + +K I E++ + G L IATT+TQARY LP +I+ F+ Q+P
Sbjct: 61 PAGARIVAVARELLVKTQNIKAIANEYTRPNCGVLRIATTNTQARYMLPSVIRRFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + + D AI TE D ++ +PCY W +IV +HPL
Sbjct: 121 EVSLHIHQGSPTQIYDALLFGEVDFAITTEAQYLFDDVVLLPCYMWNRSVIVKPEHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ + YPL+TY F+G LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 CKKLTIEALGQYPLVTYTFGFTGGSDLDYAFNSAGLLPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ ASHLF ++++++ K G +LR+Y+Y FI+ SP L R +
Sbjct: 241 GIMASMA-HTEADNDLVALDASHLFRSSMTQIAFKHGIFLRNYMYDFIQYFSPHLTRTLV 299
Query: 301 NK 302
+
Sbjct: 300 EQ 301
>gi|429105293|ref|ZP_19167162.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter malonaticus 681]
gi|429110882|ref|ZP_19172652.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter malonaticus 507]
gi|426292016|emb|CCJ93275.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter malonaticus 681]
gi|426312039|emb|CCJ98765.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter malonaticus 507]
Length = 317
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 199/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIESLLQSGTADIGIASERLSADPGLVAYPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ASPLTLEEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A A + + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQASEPHEESLLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|418825853|ref|ZP_13381120.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392811848|gb|EJA67847.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 297
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 178/281 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SI+++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLR 281
G+IAS+A D D +L I A +F + +++ ++ T+LR
Sbjct: 241 GVIASMAVDPLTDPDLVRIDAHDIFSHSTTKIGFRRSTFLR 281
>gi|260913992|ref|ZP_05920466.1| HTH-type transcriptional regulator CysB [Pasteurella dagmatis ATCC
43325]
gi|260632079|gb|EEX50256.1| HTH-type transcriptional regulator CysB [Pasteurella dagmatis ATCC
43325]
Length = 323
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + E++ + G L IATT+TQARY LP +I+ F+ Q+P
Sbjct: 61 PAGKKIIAIARELLVKTQSIKAVANEYTQPNHGVLRIATTNTQARYVLPPVIERFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D ++ +PCY+W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSGEVDLAITTEAQYLFDDVVLLPCYKWNRSVIVKPDHPLSE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CKNLTIEELGKYPLVTYTFGFTGVSDLDYAFNTAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I A HLF ++ ++ K T+LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMAHTKD-DTDLLAIDAHHLFNSSTVQIAFKHSTFLRTYMYDFINYFSPHLTRQVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|293396684|ref|ZP_06640960.1| Cys regulon transcriptional regulator Cbl [Serratia odorifera DSM
4582]
gi|291420948|gb|EFE94201.1| Cys regulon transcriptional regulator Cbl [Serratia odorifera DSM
4582]
Length = 317
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 196/295 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R+N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARRNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ + FS+ D G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVMAERILNDANNIRRLAEVFSSNDAGQLHIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG+P++I M+ + +ADI I +E L + L + P Y+W + I+VP DHPL
Sbjct: 121 RVRVVLNQGSPEEIVSMLASGEADIGIASERLINDESLAAFPYYRWHHTILVPQDHPLTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+ +S PLITY +GR +LD F TP I L +SD+IKTYVEL +G+
Sbjct: 181 EANVTLEMLSTLPLITYRQGITGRSRLDAAFKAAGFTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A ++++ RD L S++A HLF + +K+ R+Y + FI+L +P L
Sbjct: 241 GILADMSYEKERDGGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTL 295
>gi|429103981|ref|ZP_19165955.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter turicensis 564]
gi|426290630|emb|CCJ92068.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Cronobacter turicensis 564]
Length = 317
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPSVIKTFRSLFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++++ ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIESLLQSGTADIGIASERLSADPGLVAYPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L EIS +PLITY +GR ++D FS + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 ASPLTLDEISRWPLITYRQGITGRSRIDEAFSRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A A + + + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQASEPHEESLLTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|312172802|emb|CBX81058.1| HTH-type transcriptional regulator cysB [Erwinia amylovora ATCC
BAA-2158]
Length = 318
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 190/302 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+I+ F + +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIRAFRVLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +A + I +E L + L + P + W + ++VP H L
Sbjct: 121 NVRLELNQGSPQEIVSMLMTGEAGVGIASEQLVNNPALAAFPWFSWHHALLVPQGHELQQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L IVL +SD++KTYVEL +G+
Sbjct: 181 QQPVSLAALSRYPLITYRQGVTGRSRVDRAFQDASLQADIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A +L + ASHLF T + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACQLEPHSSLHRLDASHLFETNTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|417845734|ref|ZP_12491760.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21639]
gi|341954803|gb|EGT81276.1| HTH-type transcriptional regulator CysB [Haemophilus haemolyticus
M21639]
Length = 323
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 191/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E N N+TEAA ALY SQPG+SK + LE+EL ++IF RHGK I+ +T
Sbjct: 1 MKMQQLRYIVEIANHNLNVTEAANALYISQPGISKQVRLLEDELGLEIFERHGKHIKSIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G++ I E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGKKIISIARELLVKAQGIRAIADEYTQPNHGVLRIATTNTQARYMLPSVIERFSQKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D L+ IPCY W +IV +HPL
Sbjct: 121 DVSLHIHQGSPTQIHDALMSGEVDLAITTEAPYLFDDLVQIPCYWWNRAVIVTPEHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++++E+ YPL+TY F+G LD F+ + P IV ++DIIKTYV L +G+
Sbjct: 181 VKELTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADIIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +I ASHLF +++ + K T+LR+Y+Y F++ SP L R +
Sbjct: 241 GIMASMAH-TPSDTDLVAIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|167854490|ref|ZP_02477271.1| HTH-type transcriptional regulator CysB [Haemophilus parasuis
29755]
gi|167854245|gb|EDS25478.1| HTH-type transcriptional regulator CysB [Haemophilus parasuis
29755]
Length = 327
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 195/301 (64%), Gaps = 5/301 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE+EL I IF R GK I+ LT
Sbjct: 1 MKLQQLRYIVEIVNQNMNITEAAEVLYTSQPGISKQVRLLEDELGIHIFERCGKHIKALT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + +G+K I +E ++ G L IATT+TQARY LPKII++F ++P
Sbjct: 61 PAGERIITIAREMLAQAQGIKSIAEEQTSPHKGILRIATTNTQARYVLPKIIEKFKNKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI+TE + +I +PCY W +IV DHPL
Sbjct: 121 SVSLHLHQGSPTQIYDALMAGEVDLAIITEAQYLFENVILLPCYMWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
L N ++++E+ Y LITY F+GR LD+ F+ + P IV ++D+IKTYV
Sbjct: 181 LNKGNNKLTIEELGQYDLITYTFGFTGRSDLDKAFNKHGILPRIVFTATDADVIKTYVRS 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+GIGI+A++A+ + DK+L +I ASHLF ++++++ K+G +LR+Y+Y FI S L
Sbjct: 241 GLGIGIMATMAY-TKEDKDLVAIDASHLFQSSMTQIAFKRGVFLRNYMYDFINYFSAHLT 299
Query: 297 R 297
+
Sbjct: 300 K 300
>gi|387769329|ref|ZP_10125592.1| transcriptional regulator CysB [Pasteurella bettyae CCUG 2042]
gi|386906638|gb|EIJ71363.1| transcriptional regulator CysB [Pasteurella bettyae CCUG 2042]
Length = 323
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 191/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA ALYTSQPG+SK + LE+EL ++IF R+GK I+ +T
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKAIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ ++ + + +K + E++ + G L IATT+TQARY LP +I+ F+ Q+P
Sbjct: 61 PAGNKIVAIARELLVKTQAIKSVANEYTQPNHGVLRIATTNTQARYMLPGVIERFSKQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P Q+ + + + + D+AI TE D ++ +PCY W I+V HPL
Sbjct: 121 DVSLHVHQGSPNQLYDALLSGEVDLAITTEAQYLFDDVVLLPCYMWNRSIVVNPGHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD FS + P IV ++D+IKTYV L +G+
Sbjct: 181 CKNLTIEELGKYPLVTYTFGFTGVSDLDYAFSSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A + D +L I ASHLF ++++++ K T+LR+Y+Y FI SP L R +
Sbjct: 241 GIIASMAH-TPEDTDLVKIDASHLFKSSMTQIAFKHSTFLRNYMYDFINYFSPHLTRTLV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|300723340|ref|YP_003712643.1| biosynthesis of L-cysteine and regulator of sulfur assimilation
transcriptional regulator [Xenorhabdus nematophila ATCC
19061]
gi|297629860|emb|CBJ90476.1| transcriptional regulator of biosynthesis of L-cysteine and
regulator of sulfur assimilation (LysR familiy)
[Xenorhabdus nematophila ATCC 19061]
Length = 324
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 187/304 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R ++ +I+ ++ + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEIVRISREVLSKIDSIRSVASEHTYPDRGSLYIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W ++V DHPL
Sbjct: 121 NVSLHMHQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRSVVVTRDHPLAN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E++ YP++TY F+GR +LD F L P IV ++D+IKTYV L +G+
Sbjct: 181 RQNVTIEELAEYPIVTYTFGFTGRSELDVAFDRAGLKPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+A + +D +L I F + +++ ++ ++LRSY+Y FI +P L R +
Sbjct: 241 GVIASMAVEPVQDSDLVRIDMRDKFSYSTTKIGFRRSSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|378766641|ref|YP_005195104.1| LysR family transcriptional regulator [Pantoea ananatis LMG 5342]
gi|365186117|emb|CCF09067.1| transcriptional regulator, LysR family [Pantoea ananatis LMG 5342]
Length = 319
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+ FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARREFNLTEVASTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G L+IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGILSIATTHTQARYSLPPVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ + D+ I +E+L + L + P + W + ++VP DH L+
Sbjct: 121 NVRLELNQGSPQEIVNMLLAGEVDVGIASEMLVNNSSLAAFPWFSWHHALLVPQDHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S++PLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 QQPVSLNALSHHPLITYRQGITGRSRVDRAFQGAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A A ++ L + A+HLF + +K+G R+YV+ F++L + L+
Sbjct: 241 GILADQACETEPGGELVRLDATHLFEANTVWLGLKRGQLQRNYVWQFLELCNANLS 296
>gi|304398947|ref|ZP_07380817.1| transcriptional regulator, LysR family [Pantoea sp. aB]
gi|440759879|ref|ZP_20939002.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Pantoea agglomerans 299R]
gi|304353651|gb|EFM18028.1| transcriptional regulator, LysR family [Pantoea sp. aB]
gi|436426386|gb|ELP24100.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Pantoea agglomerans 299R]
Length = 319
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 196/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNETSGILTIATTHTQARYSLPKVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +ADI I +E+L + L + P + W + ++VP H L+
Sbjct: 121 NVRLELNQGSPQEIVTMLLAGEADIGIASEMLVNNSSLAAFPWFSWHHALLVPKGHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S YPLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 NQPVSLSTLSRYPLITYRQGITGRSRVDRAFQAAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A ++ ++ L + A+HLF + + +K+G R+YV+ F++L + L+ + I
Sbjct: 241 GILADQACETEENEELERLDATHLFDASTVWLGLKRGQLQRNYVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|291617970|ref|YP_003520712.1| Cbl [Pantoea ananatis LMG 20103]
gi|386078829|ref|YP_005992354.1| LysR family transcriptional regulator Cbl [Pantoea ananatis PA13]
gi|291153000|gb|ADD77584.1| Cbl [Pantoea ananatis LMG 20103]
gi|354988010|gb|AER32134.1| LysR family transcriptional regulator Cbl [Pantoea ananatis PA13]
Length = 319
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+ FNLTE A L+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARREFNLTEVASTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G L+IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGILSIATTHTQARYSLPPVIKAFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ + D+ I +E+L + L + P + W + ++VP DH L+
Sbjct: 121 NVRLELNQGSPQEIVNMLLAGEVDVGIASEMLVNNSSLAAFPWFSWHHALLVPHDHELVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S++PLITY +GR ++DR F L P IVL +SD++KTYV+L +G+
Sbjct: 181 QQPVSLNALSHHPLITYRQGITGRSRVDRAFQGAGLKPDIVLSAQDSDVVKTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A A ++ L + A+HLF + +K+G R+YV+ F++L + L+
Sbjct: 241 GILADQACETEPGGELVRLDATHLFEANTVWLGLKRGQLQRNYVWQFLELCNANLS 296
>gi|374619852|ref|ZP_09692386.1| transcriptional regulator [gamma proteobacterium HIMB55]
gi|374303079|gb|EHQ57263.1| transcriptional regulator [gamma proteobacterium HIMB55]
Length = 324
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 196/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q +++ E + N++ A++L+TSQPG+SK I LE EL ++IF R GK + +T
Sbjct: 1 MKLQQLKYIWEVAHHDLNVSATAQSLFTSQPGISKQIRLLEGELGVEIFSRSGKHLTHIT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+AI+ I+++ E +K+I ++ S +G++++ATTH QARY LP+ I F+ + P
Sbjct: 61 PAGEAIIEMAGEILRQTESIKRIAQDHSDNVSGSMSLATTHGQARYVLPESIARFSAEHP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P+QI EM D AI TE L L+++P ++W + ++VP HPL
Sbjct: 121 EVSLEMRQGSPQQIAEMAAKGSVDFAIATEALQQYASLVTLPFFRWSHCVVVPSGHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+S +L++I++YP+ITY F+GR ++D F + LTP V+ ++D+IKTYV MG+
Sbjct: 181 LDSPTLEQIAHYPIITYTEGFTGRFRIDEGFEARGLTPNYVVTAADADVIKTYVRKGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GII+++A++ D +L I + + F + +S + ++GT+LR ++Y FI+ L+P L + +
Sbjct: 241 GIISTMAYEEQSDNDLIKIGSPNYFASLLSCIAFRRGTFLRGFMYGFIEQLAPHLTQDIV 300
Query: 301 NKILN 305
++
Sbjct: 301 KHAMS 305
>gi|37526329|ref|NP_929673.1| transcriptional regulator CysB [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785760|emb|CAE14808.1| Cys regulon transcriptional activator [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 324
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 187/302 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +++ ++ + E + + G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKVDAIRSVASEHTYPNRGSLYIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 QVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYEDLIMLPCYHWNRTLVVTSDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
S+S++E++ Y L+TY F+GR +LD F L P IV ++D+IKTYV L +G+
Sbjct: 181 KESVSIEELAEYQLVTYTFGFTGRSELDVAFDKVGLKPKIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA++A D +D +L I F + +++ ++ ++LRSY+Y F+ +P L R I
Sbjct: 241 GVIANMAVDPVQDNDLVCIDMRDKFSYSTTKIGFRRSSFLRSYMYDFMWRFAPHLTRDVI 300
Query: 301 NK 302
++
Sbjct: 301 DQ 302
>gi|261343655|ref|ZP_05971300.1| HTH-type transcriptional regulator CysB [Providencia rustigianii
DSM 4541]
gi|282568038|gb|EFB73573.1| HTH-type transcriptional regulator CysB [Providencia rustigianii
DSM 4541]
Length = 324
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 187/304 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIEAIRSVAGEHTVPDRGSLKIATTHTQARYALPPVIKSFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W +IVP HPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRCVIVPKGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++I+ Y ++TY F+GR +LD F L P I+ ++D+IKTYV+L +GI
Sbjct: 181 KKNVTIEDIAQYQIVTYTHGFTGRSELDVAFQKVGLEPKIIFTATDADVIKTYVKLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D DK+L I F + +++ K+ ++LRSY+Y FI +P L R +
Sbjct: 241 GIIASMAVDPEVDKDLVVIDMRDKFSYSTTKIGFKRTSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|423202893|ref|ZP_17189472.1| hypothetical protein HMPREF1167_03055 [Aeromonas veronii AER39]
gi|404614489|gb|EKB11488.1| hypothetical protein HMPREF1167_03055 [Aeromonas veronii AER39]
Length = 319
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 194/306 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ + + E V+ NFN++ A+ LYTSQP +SK + LE+EL + +F R GK + GLT
Sbjct: 1 MNIARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEDELGLALFTRKGKNLVGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + ++ ++E + ++ +G L IATTHTQARY LP +I EF+ ++P
Sbjct: 61 SAGEKVMELAKGVVAQVEQINQLSLGEQLATSGVLRIATTHTQARYKLPAVITEFSRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V + L QG P Q+ +M+++ D+AI TE + D+L ++PCY+W ++VP HPLL
Sbjct: 121 DVAIQLHQGAPAQLAQMVQSGDVDMAIATESMYLFDELAAVPCYRWGRSVVVPHGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+ +++ YPLITY F+GR K+D+ F L+P VL ++D+IK YV L MG+
Sbjct: 181 CQPLSMADLARYPLITYVFGFTGRSKMDKAFGRHGLSPKTVLTATDTDVIKHYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD ++L S++ HL ++ + + +++ +LR Y+Y FI L +P ++R+ +
Sbjct: 241 GVIASVAFDEGDREDLVSLNIDHLIASSATHICLRKHAHLRDYMYDFIHLYAPHISRETV 300
Query: 301 NKILNN 306
L N
Sbjct: 301 QLHLIN 306
>gi|251792415|ref|YP_003007141.1| transcriptional regulator CysB [Aggregatibacter aphrophilus NJ8700]
gi|422335971|ref|ZP_16416944.1| HTH-type transcriptional regulator cysB [Aggregatibacter
aphrophilus F0387]
gi|247533808|gb|ACS97054.1| HTH-type transcriptional regulator CysB (Cys regulon
transcriptionalactivator) [Aggregatibacter aphrophilus
NJ8700]
gi|353346157|gb|EHB90442.1| HTH-type transcriptional regulator cysB [Aggregatibacter
aphrophilus F0387]
Length = 323
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M Q R+V E V QNFN+TEAA AL+TSQPG+SK + LE EL ++IF R+GK ++GLT
Sbjct: 1 MKFQQLRYVVEIVNQNFNVTEAANALFTSQPGISKQVRLLENELGLEIFERNGKHMKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ +M +++G+ + E++ D G L IATT+TQARY LP +++ F+ ++P
Sbjct: 61 PAGKKIVAISRELMVKMQGIHSVADEYTKPDHGVLRIATTNTQARYMLPLVVERFSKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + D+AI TE D ++ +PCY W +IV DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSGEVDLAITTEAQYLFDGVVLLPCYLWNRSVIVKPDHPLAK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CENLTIEELGKYPLVTYTFGFTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L ++ A HLF +++++ K +LR+Y+Y FI SP L R+ +
Sbjct: 241 GIMASMA-HTPADTDLVALKADHLFRASMTQIAFKHSAFLRNYMYDFINYFSPHLTRENV 299
Query: 301 NK 302
+
Sbjct: 300 ER 301
>gi|417850524|ref|ZP_12496420.1| transcriptional regulator CysB [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338220617|gb|EGP06082.1| transcriptional regulator CysB [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 323
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA AL+TSQPG+SK + LE+EL ++IF R+GK I+ LT
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALFTSQPGISKQVRLLEDELGLEIFERNGKHIKSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+ ++ + + ++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGQKIVAIARELLVKTQSIRAVANEYTQPNHGVLRIATTNTQARYVLPPVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + DIAI TE D ++ +PCY W +++ DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSGEVDIAITTEAQYLFDDVVLLPCYMWNRSVLIKHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++L+E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CKNLTLEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +++A HLF + ++ K T+LR+Y+Y FI+ SP L R+ +
Sbjct: 241 GIMASMAHTKD-DGDLLALNADHLFNPSTVQIAFKHSTFLRAYMYDFIQYFSPHLTRELV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|300717392|ref|YP_003742195.1| transcriptional regulator cys regulon [Erwinia billingiae Eb661]
gi|299063228|emb|CAX60348.1| Transcriptional regulator cys regulon [Erwinia billingiae Eb661]
Length = 318
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 193/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R +FNLTE A L+TSQ GVS+ I +LE+EL +++FIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARCDFNLTEVANTLFTSQSGVSRHIRDLEDELGVELFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIKAFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L QG+P++I M+ +AD+ I +E + + L + P + W + ++VP H L
Sbjct: 121 NVRVELNQGSPQEIVTMLAAGEADVGIASEQVVNNPALAAFPWFNWHHALLVPKGHELEQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL+ +S YPLITY +GR ++DR F L P IVL +SD++KTYVEL +G+
Sbjct: 181 QQPVSLEALSRYPLITYRQGITGRSRVDRAFHSASLKPDIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A A + +L + A HLF + + +K+G R++V+ F++L + L+ + I
Sbjct: 241 GVLADQACQLDEHSSLTRLEAKHLFESNTVWLGLKRGQLQRNFVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|212711749|ref|ZP_03319877.1| hypothetical protein PROVALCAL_02824 [Providencia alcalifaciens DSM
30120]
gi|422018048|ref|ZP_16364607.1| LysR family transcriptional regulator [Providencia alcalifaciens
Dmel2]
gi|212685271|gb|EEB44799.1| hypothetical protein PROVALCAL_02824 [Providencia alcalifaciens DSM
30120]
gi|414105173|gb|EKT66736.1| LysR family transcriptional regulator [Providencia alcalifaciens
Dmel2]
Length = 324
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 187/304 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIEAIRSVAGEHTIPDRGSLKIATTHTQARYALPPVIKTFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W +IVP HPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRCVIVPTGHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++I+ Y ++TY F+GR +LD F L P I+ ++D+IKTYV+L +GI
Sbjct: 181 KKNVTIEDIAEYQIVTYTHGFTGRSELDVAFQKVGLEPKIIFTATDADVIKTYVKLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D DK+L I F + +++ K+ ++LRSY+Y FI +P L R +
Sbjct: 241 GIIASMAVDPEVDKDLVVIDMRDKFSYSTTKIGFKRTSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
+K +
Sbjct: 301 DKAI 304
>gi|225024680|ref|ZP_03713872.1| hypothetical protein EIKCOROL_01562 [Eikenella corrodens ATCC
23834]
gi|224942569|gb|EEG23778.1| hypothetical protein EIKCOROL_01562 [Eikenella corrodens ATCC
23834]
Length = 314
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 193/306 (63%), Gaps = 4/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R N N++EAA+ L+TSQPG+SK I LE+EL + +F+RHGKRI +T
Sbjct: 1 MKLQQLRYFLEVYRCNLNISEAAEILFTSQPGISKQIKLLEDELGVQLFVRHGKRIVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PGQA+L E I ++++ ++ IG EF+ D+G+LTIATT+TQAR+ LP ++ EF Q+P
Sbjct: 61 PPGQAVLEIAERIFRDVQSIRNIGTEFAEQDSGHLTIATTYTQARHVLPPVVAEFFRQYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV LSL+ P + M+ AD AI +E + +L I W ++VP H L
Sbjct: 121 KVGLSLVPAEPSAVDRMVAEGLADFAINSEADARHSELRHISARAWNRCVLVPQGHKLAD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGR-IKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
N ISL ++S+ PLI Y + +G+ L + FS +L P +VL ++N+ +IKTYV +
Sbjct: 181 KNRISLADLSSMPLIGY--TEAGQDTALQQAFSGSELALPQVVLSSMNAGVIKTYVRAGL 238
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A A+D RD +L + A HLF + + ++++Q YLR+Y Y F++L P L RK
Sbjct: 239 GVGLLADAAYDPQRDADLVCLPADHLFKPSFTYIVVRQDAYLRNYAYDFMQLYLPGLTRK 298
Query: 299 FINKIL 304
I + L
Sbjct: 299 HIEQAL 304
>gi|311279032|ref|YP_003941263.1| LysR family transcriptional regulator [Enterobacter cloacae SCF1]
gi|308748227|gb|ADO47979.1| transcriptional regulator, LysR family [Enterobacter cloacae SCF1]
Length = 316
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 196/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ TG LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDATGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 DVRLELIQGTPQEIETLLQNGGADIGIASERLSNDPSLVAFPWFRWHHNLLVPEDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N ++L+ I+ +PL+TY +GR ++D F+ + L P +VL +SD+IKTYVEL +GI
Sbjct: 181 TNPLTLEAIARWPLVTYRQGITGRSRIDEAFNRKGLIPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + DS LR + HLF + + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSNDSLESGRLRRLDTHHLFDASTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|330831067|ref|YP_004394019.1| HTH-type transcriptional regulator CysB [Aeromonas veronii B565]
gi|423208288|ref|ZP_17194842.1| hypothetical protein HMPREF1169_00360 [Aeromonas veronii AER397]
gi|328806203|gb|AEB51402.1| HTH-type transcriptional regulator CysB [Aeromonas veronii B565]
gi|404618133|gb|EKB15053.1| hypothetical protein HMPREF1169_00360 [Aeromonas veronii AER397]
Length = 319
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 194/306 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ + + E V+ NFN++ A+ LYTSQP +SK + LE+EL + +F R GK + GLT
Sbjct: 1 MNIARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEDELGLALFTRKGKNLVGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + ++ ++E + ++ +G L IATTHTQARY LP +I EF+ ++P
Sbjct: 61 SAGEQVMELAKGVVAQVEQINQLSLGEQLATSGVLRIATTHTQARYKLPAVITEFSRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V + L QG P Q+ +M+++ D+AI TE + D+L ++PCY+W ++VP HPL+
Sbjct: 121 DVAIQLHQGAPAQLAQMVQSGDVDMAIATESMYLFDELAAVPCYRWGRSVVVPHGHPLID 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+ +++ YPLITY F+GR K+D+ FS L+P VL ++D+IK YV L MG+
Sbjct: 181 CQPLSMADLARYPLITYVFGFTGRSKMDKAFSRHGLSPKTVLTATDTDVIKHYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD + L S++ HL ++ + + +++ +LR Y+Y FI L +P ++R+ +
Sbjct: 241 GVIASVAFDEGDREALVSLNIDHLIASSATHICLRKHAHLRDYMYDFIHLYAPHISRETV 300
Query: 301 NKILNN 306
L N
Sbjct: 301 QLHLIN 306
>gi|397164931|ref|ZP_10488385.1| HTH-type transcriptional regulator cbl [Enterobacter radicincitans
DSM 16656]
gi|396093373|gb|EJI90929.1| HTH-type transcriptional regulator cbl [Enterobacter radicincitans
DSM 16656]
Length = 316
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 195/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPSVIKAFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL+
Sbjct: 121 EVRLELIQGTPQEIESLLHNGGADIGIASERLSNDSSLAAFPWFRWHHSLLVPQDHPLVQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L++IS +PLITY +GR ++D F + L P +VL +SD+IKTYVEL +G+
Sbjct: 181 CSPLTLEDISRWPLITYRQGITGRSRIDEAFGRKGLIPDVVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + N + L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGENEEGKLVRLDTQHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|350553191|ref|ZP_08922374.1| transcriptional regulator, LysR family [Thiorhodospira sibirica
ATCC 700588]
gi|349791527|gb|EGZ45408.1| transcriptional regulator, LysR family [Thiorhodospira sibirica
ATCC 700588]
Length = 323
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 187/301 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+++ N N++EAA+ + TSQPGVSK I LEEEL + +F R+GK + LT
Sbjct: 1 MKLQQLRYLKAIADNNLNISEAAQRMETSQPGVSKQIRLLEEELGVRLFHRNGKHLSALT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ +L +E I+ E+ ++ + E + G L I+TTHTQARY LP +I F ++P
Sbjct: 61 PIGQQVLARVERILSEVSNIEHLTGEARHENIGQLRISTTHTQARYVLPAVIDLFRQRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P+QI ++ ++ D I TE + + + +P Y+W + +I+P DHPL
Sbjct: 121 EVRLQLHQGTPRQIVDIAQSGAVDFIIATEAPTFPGQFVMLPAYRWAHCVIMPKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL E++ YP++TY F+GR +LD +F L+P IVL ++D+IKTYV +G+
Sbjct: 181 QTPLSLAELATYPIVTYLEGFTGRGRLDDDFKRHGLSPDIVLTAADADVIKTYVRHGLGL 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +AFD D +L F +I+R+ +Q +LRSY+Y+F++L +P L R +
Sbjct: 241 GIIAHMAFDPQEDHDLVKCPVEPAFSGSITRIGFRQDAWLRSYMYAFLELFAPHLTRARV 300
Query: 301 N 301
+
Sbjct: 301 D 301
>gi|406675712|ref|ZP_11082899.1| hypothetical protein HMPREF1170_01107 [Aeromonas veronii AMC35]
gi|404627102|gb|EKB23908.1| hypothetical protein HMPREF1170_01107 [Aeromonas veronii AMC35]
Length = 319
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 195/306 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ + + E V+ NFN++ A+ LYTSQP +SK + LE+EL + +F R GK + GLT
Sbjct: 1 MNIARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEDELGLALFTRKGKNLVGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + ++ ++E + ++ +G L IATTHTQARY LP +I EF+ ++P
Sbjct: 61 CAGEKVMELAKGVVAQVEQINQLSLGEQLATSGVLRIATTHTQARYKLPAVISEFSRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V + L QG P Q+ +M+++ D+AI TE + D+L ++PC++W ++VP HPLL
Sbjct: 121 EVAIQLHQGAPAQLAQMVQSGDVDMAIATESMYLFDELAAVPCHRWGRSVVVPHGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+ +++ YPLITY F+GR K+D+ FS L+P VL ++D+IK YV L MG+
Sbjct: 181 CQPLSMADLARYPLITYVFGFTGRSKMDKAFSRHGLSPKTVLTATDTDVIKHYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD ++L S++ HL ++ + + +++ +LR Y+Y FI L +P + R+ +
Sbjct: 241 GVIASMAFDEGDREDLVSLNIDHLIASSATHICLRKHAHLRDYMYDFIHLYAPHICRETV 300
Query: 301 NKILNN 306
L N
Sbjct: 301 QLHLIN 306
>gi|425063348|ref|ZP_18466473.1| Cys regulon transcriptional activatorysB [Pasteurella multocida
subsp. gallicida X73]
gi|404382911|gb|EJZ79368.1| Cys regulon transcriptional activatorysB [Pasteurella multocida
subsp. gallicida X73]
Length = 323
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA AL+TSQPG+SK + LE+EL ++IF R+GK I+ LT
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALFTSQPGISKQVRLLEDELGLEIFERNGKHIKSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+ ++ + + ++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGQKIVAIARELLVKTQSIRAVANEYTQPNHGVLRIATTNTQARYVLPPVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + DIAI TE D ++ +PCY W +++ DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSSEVDIAITTEAQYLFDDVVLLPCYMWNRSVLIKHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CKNLTIEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +++A HLF + ++ K T+LR+Y+Y FI+ SP L R+ +
Sbjct: 241 GIMASMAHTKD-DGDLLALNADHLFNPSTVQIAFKHSTFLRAYMYDFIQYFSPHLTRELV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|423203954|ref|ZP_17190510.1| hypothetical protein HMPREF1168_00145 [Aeromonas veronii AMC34]
gi|404628320|gb|EKB25104.1| hypothetical protein HMPREF1168_00145 [Aeromonas veronii AMC34]
Length = 348
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 193/306 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ + + E V+ NFN++ A+ LYTSQP +SK + LE+EL +F R GK + GLT
Sbjct: 30 MNIARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEDELGFALFTRKGKNLVGLT 89
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + ++ ++E + ++ +G L IATTHTQARY LP +I EF+ ++P
Sbjct: 90 SAGEQVMELAKGVVAQVEQINQLSLGEQLATSGVLRIATTHTQARYKLPAVITEFSRRYP 149
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V + L QG P Q+ +M+++ D+AI TE + D+L ++PCY+W ++VP HPL+
Sbjct: 150 DVAIQLHQGAPAQLAQMVQSGDVDMAIATESMYLFDELAAVPCYRWGRSVVVPHGHPLID 209
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+ +++ YPLITY F+GR K+D+ FS L+P VL ++D+IK YV L MG+
Sbjct: 210 CQPLSMADLARYPLITYVFGFTGRSKMDKAFSRHGLSPKTVLTATDTDVIKHYVRLGMGV 269
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD + L S++ HL ++ + + +++ +LR Y+Y FI L +P ++R+ +
Sbjct: 270 GVIASVAFDEGDREALVSLNIDHLIASSATHICLRKHAHLRDYMYDFIHLYAPHISRETV 329
Query: 301 NKILNN 306
L N
Sbjct: 330 QLHLIN 335
>gi|15602525|ref|NP_245597.1| transcriptional regulator CysB [Pasteurella multocida subsp.
multocida str. Pm70]
gi|378774367|ref|YP_005176610.1| HTH-type transcriptional regulator CysB [Pasteurella multocida
36950]
gi|383310329|ref|YP_005363139.1| HTH-type transcriptional regulator CysB [Pasteurella multocida
subsp. multocida str. HN06]
gi|386834195|ref|YP_006239510.1| CysB [Pasteurella multocida subsp. multocida str. 3480]
gi|417855723|ref|ZP_12500807.1| transcriptional regulator CysB [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421263396|ref|ZP_15714446.1| transcriptional regulator CysB [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425065521|ref|ZP_18468641.1| Cys regulon transcriptional activatorysB [Pasteurella multocida
subsp. gallicida P1059]
gi|12720937|gb|AAK02744.1| CysB [Pasteurella multocida subsp. multocida str. Pm70]
gi|338215669|gb|EGP01924.1| transcriptional regulator CysB [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|356596915|gb|AET15641.1| HTH-type transcriptional regulator CysB [Pasteurella multocida
36950]
gi|380871601|gb|AFF23968.1| HTH-type transcriptional regulator CysB [Pasteurella multocida
subsp. multocida str. HN06]
gi|385200896|gb|AFI45751.1| CysB [Pasteurella multocida subsp. multocida str. 3480]
gi|401689629|gb|EJS85031.1| transcriptional regulator CysB [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404383897|gb|EJZ80342.1| Cys regulon transcriptional activatorysB [Pasteurella multocida
subsp. gallicida P1059]
Length = 323
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 193/302 (63%), Gaps = 1/302 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M + Q R++ E V QN N+TEAA AL+TSQPG+SK + LE+EL ++IF R+GK I+ LT
Sbjct: 1 MKIQQLRYIVEIVNQNLNVTEAANALFTSQPGISKQVRLLEDELGLEIFERNGKHIKSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+ ++ + + ++ + E++ + G L IATT+TQARY LP +I+ F+ ++P
Sbjct: 61 PAGQKIVAIARELLVKTQSIRAVANEYTQPNHGVLRIATTNTQARYVLPPVIERFSKKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + + + DIAI TE D ++ +PCY W +++ DHPL
Sbjct: 121 DVSLHIHQGSPTQIYDALLSGEVDIAITTEAQYLFDDVVLLPCYMWNRSVLIKHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++++E+ YPL+TY F+G LD F+ + P IV ++D+IKTYV L +G+
Sbjct: 181 CKNLTIEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+AS+A + D +L +++A HLF + ++ K T+LR+Y+Y FI+ SP L R+ +
Sbjct: 241 GIMASMAHTKD-DGDLLALNADHLFNPSTVQIAFKHSTFLRAYMYDFIQYFSPHLTRELV 299
Query: 301 NK 302
K
Sbjct: 300 EK 301
>gi|401674959|ref|ZP_10806956.1| transcriptional regulator Cbl [Enterobacter sp. SST3]
gi|400217974|gb|EJO48863.1| transcriptional regulator Cbl [Enterobacter sp. SST3]
Length = 316
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 200/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 EVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L++++ +PLITY +GR ++D F+ + LTP IVL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEDVAKWPLITYRQGITGRSRIDEAFNRKGLTPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEREDGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|378580063|ref|ZP_09828722.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Pantoea stewartii subsp. stewartii DC283]
gi|377817241|gb|EHU00338.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Pantoea stewartii subsp. stewartii DC283]
Length = 319
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 189/296 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+ FNLTE A L+TSQ GVS+ I +LE+EL ++IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARREFNLTEVASTLFTSQSGVSRHIRDLEDELGVEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G L+IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGILSIATTHTQARYSLPPVIKSFRQLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ + D+ I +E+L+ ++ L + P + W + ++VP DH L
Sbjct: 121 NVRLELNQGSPQEIVNMLLAGEVDVGIASEMLANNNSLAAFPWFSWHHALLVPRDHELAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL +S +PLITY +GR ++D F L P IVL +SD+++TYV+L +G+
Sbjct: 181 QQPVSLNALSQHPLITYRQGITGRSRVDSAFQRAGLKPDIVLSAQDSDVVRTYVKLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A A + L + A+HLF + +K+G R+YV+ F++L + L+
Sbjct: 241 GILADQACEKEPGGELVRLDATHLFDANTVWLGLKRGQLQRNYVWQFLELCNANLS 296
>gi|334704164|ref|ZP_08520030.1| HTH-type transcriptional regulator CysB [Aeromonas caviae Ae398]
Length = 319
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 192/306 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ + + E V+ NFN++ A+ LYTSQP +SK + LEEEL + +F R GK + GLT
Sbjct: 1 MNIARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEEELGLALFTRKGKNLAGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ ++ ++E + ++ +G L IATTHT ARY LP +I EF+ ++P
Sbjct: 61 PMGEQVMELARGVVAQVEQIGQLSLGDQLATSGVLRIATTHTMARYKLPAVITEFSRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V + L QG P Q+ +M +N ++AI TE + D+L ++PCY+W ++VP HPLL
Sbjct: 121 EVSIQLHQGAPAQLAQMAQNGDVEMAIATESMHLFDELATVPCYRWGRSVVVPHGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ +++ YPLITY F+GR K+D+ F L+P IVL +SDIIK YV L MG+
Sbjct: 181 CQPLAMADLARYPLITYVFGFTGRSKMDKAFGRHGLSPRIVLTATDSDIIKHYVRLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA+ AFD ++L ++ HL ++++ V +++ +LR Y+Y FI L +P ++R+ +
Sbjct: 241 GVIATSAFDEGDRESLVCLNIDHLIASSVAHVCLRRHAHLRDYMYDFIHLYAPHVSRETV 300
Query: 301 NKILNN 306
L N
Sbjct: 301 QLALLN 306
>gi|417879462|ref|ZP_12524029.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH3]
gi|342228423|gb|EGT93313.1| transcriptional regulator CysB-like protein [Acinetobacter
baumannii ABNIH3]
Length = 271
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 176/265 (66%), Gaps = 1/265 (0%)
Query: 39 ELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIA 98
+LE+EL + +F+R GKR+ GLT+PGQ++L +E ++ + E +K++ +F+ D G LTIA
Sbjct: 3 DLEDELGVQLFVRKGKRLLGLTEPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIA 62
Query: 99 TTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKL 158
TTHTQARY LP I+ +F FPKV L L Q +P +I EM+ +ADI I TE L+ + L
Sbjct: 63 TTHTQARYVLPPIVNQFKKLFPKVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENL 122
Query: 159 ISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTP 218
SIP YQW++ II P DHPL L+ I L +S YPLITY F+GR K+D+ F ++
Sbjct: 123 ASIPYYQWQHSIITPQDHPLTQLDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDA 182
Query: 219 YIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGT 278
IV+ +++D+IKTYVEL MG+GI+ +A+D+ RD L+ I + +FG + + +++G
Sbjct: 183 DIVMSALDADVIKTYVELGMGVGIVNDVAYDAERDYRLKQIK-TDIFGVNTTWIAVRKGH 241
Query: 279 YLRSYVYSFIKLLSPKLNRKFINKI 303
LR Y Y FI L SP + K + KI
Sbjct: 242 LLRGYGYEFISLCSPDADIKALKKI 266
>gi|354723938|ref|ZP_09038153.1| transcriptional regulator Cbl [Enterobacter mori LMG 25706]
Length = 316
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 199/296 (67%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 DVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L++I+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEDIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEREDGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|254489789|ref|ZP_05102984.1| LysR substrate binding domain protein [Methylophaga thiooxidans
DMS010]
gi|224464874|gb|EEF81128.1| LysR substrate binding domain protein [Methylophaga thiooxydans
DMS010]
Length = 307
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 190/300 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M LHQ R+VRE V+ N +++EAAK L TSQP VS + +LE+EL + IF R GKR+ +T
Sbjct: 1 MQLHQLRYVREIVKNNLSISEAAKVLKTSQPSVSSQLQQLEQELKLKIFERRGKRLVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ I+ E I++++ + + + +G L+I TT TQA YALP IK F+ ++P
Sbjct: 61 PLKETIVEIAERILKDVNNIHCLASDNHNEASGTLSIGTTLTQALYALPSAIKTFSERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L++LQG P++I+E+ + DIAI TE L + L + PCY W I+VP +HPL
Sbjct: 121 NVHLNMLQGTPREISELAAEGEIDIAIATEALEHNSALHTFPCYDWNRTIVVPKNHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ +S YP++TY + ++GR D F + L P ++ ++D+IKTYV L MGI
Sbjct: 181 EKILTLEAVSKYPILTYMMDYTGRALQDASFKERGLEPNVIFTATDADVIKTYVGLGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+AF++ +D L + ASHLF + + + ++G +LR+Y Y+FI+ +P L + I
Sbjct: 241 GIIASMAFNTKKDTPLVGLDASHLFRPSTTLLGFRKGGHLRAYTYAFIECFAPHLTQAAI 300
>gi|334343538|ref|YP_004556142.1| LysR family transcriptional regulator [Sphingobium chlorophenolicum
L-1]
gi|334104213|gb|AEG51636.1| transcriptional regulator, LysR family [Sphingobium
chlorophenolicum L-1]
Length = 312
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+V E VR N +L+ AA AL TSQPGVS+ I LE+EL +IF+R RI LT
Sbjct: 1 MKLQQLRYVVEIVRHNNHLSAAADALNTSQPGVSRQIQLLEQELGFEIFMRTRNRIIDLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ + + I ++ LK + ++ + + G TIATTHTQARY LPK++++F ++P
Sbjct: 61 EPGRVVFSIAQRIATDVAALKSLKEDMHSGNRGVFTIATTHTQARYVLPKVVEKFVARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
VKL L QG+P++I ++ AD++I TE L+ + C+ I+ P+ HP+L
Sbjct: 121 DVKLVLKQGDPEEICALVEAGDADLSIGTETTRDFPNLVKLDCFDLHRCIVAPVGHPILA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+EI+ YP+ITYD +SGR K+ + F+ L P IV+ I++D+ KTYV + +GI
Sbjct: 181 VPELTLEEIACYPIITYDTRYSGRWKVMKAFTDAGLEPKIVMSGIDADVCKTYVGMGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A++ +D RD +R+ ASHL ++ ++++++ TYLRS++ F+ ++P L
Sbjct: 241 GILAAMTYDPERDVGIRARDASHLLPSSTIKIVLRRNTYLRSFLLDFVHSVAPNLT 296
>gi|448242673|ref|YP_007406726.1| transcriptional regulator CysB-like protein [Serratia marcescens
WW4]
gi|445213037|gb|AGE18707.1| transcriptional regulator CysB-like protein [Serratia marcescens
WW4]
gi|453064056|gb|EMF05028.1| transcriptional regulator CysB-like protein [Serratia marcescens
VGH107]
Length = 317
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 194/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS+ D+G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVVAERILNDANNIRRLADVFSSNDSGQLHIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG+P++I M+ +ADI I +E L + L + P Y+W + I+VP H L
Sbjct: 121 RVRVVLNQGSPEEIVSMLAAGEADIGIASERLMSDESLAAFPYYRWHHTILVPEGHELTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ +S PLITY +GR KLD F LTP I L +SD+IKTYVEL +G+
Sbjct: 181 QPQVTLEMLSTLPLITYRQGITGRAKLDAAFKSAGLTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A ++++ RD+ L S++A HLF + +K+ R+Y + FI+L +P L+
Sbjct: 241 GVLADMSYEKERDRGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTLS 296
>gi|261493944|ref|ZP_05990452.1| LysR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494771|ref|ZP_05991250.1| LysR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|452745947|ref|ZP_21945779.1| transcriptional regulator CysB [Mannheimia haemolytica serotype 6
str. H23]
gi|261309588|gb|EEY10812.1| LysR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310376|gb|EEY11571.1| LysR family transcriptional regulator [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|452086086|gb|EME02477.1| transcriptional regulator CysB [Mannheimia haemolytica serotype 6
str. H23]
Length = 327
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 198/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK ++GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESELGINIFERNGKHVKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IATT+TQARY LP +I++F ++P
Sbjct: 61 PAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNTQARYMLPSVIEKFKARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE D+ + +PCY W +IV +HPL
Sbjct: 121 EVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVLLPCYWWNRSVIVKPEHPLAA 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++++ Y LITY F+G+ LD F+ + + P IV ++D+IKTYV L
Sbjct: 181 FVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKEGILPNIVFTATDADVIKTYVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + DK+L +I+ASHLF +++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTETDKDLVAINASHLFQPSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
R + K
Sbjct: 300 RVQVEK 305
>gi|33152166|ref|NP_873519.1| transcriptional regulator CysB [Haemophilus ducreyi 35000HP]
gi|33148388|gb|AAP95908.1| cys regulon transcriptional activator [Haemophilus ducreyi 35000HP]
Length = 327
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 196/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ALYTSQPG+SK + LE EL I+IF R+GK ++GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAEALYTSQPGISKQVRLLESELGINIFERNGKHLKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G I+ ++ + + +K + +E + + G L IATT+TQARY LP II++F ++P
Sbjct: 61 PAGAKIVSIARELLVKEQSIKSVAEEQTCPNYGMLRIATTNTQARYMLPSIIEKFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI+TE ++ I +PCY W +IV DHPL
Sbjct: 121 AVSLHLCQGSPSQIYDALMAGEVDLAIITEAQYLFEEAILLPCYLWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+ +++KE+S Y LITY F+G+ LD F+ + P I+L ++ +IKTYV L
Sbjct: 181 FANQSHHLTVKELSQYDLITYTFGFTGQSDLDHAFNKAGIVPKIMLTATDAGVIKTYVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G GI+AS+A+ ++ D +L +I ASHLF +++++ +GT+LR+Y+Y FI SP L
Sbjct: 241 GLGAGIMASMAYTAS-DHDLVAIDASHLFQPSMTQIAFNRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|126207621|ref|YP_001052846.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165975589|ref|YP_001651182.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149404|ref|YP_001967929.1| CysB family transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303249837|ref|ZP_07336041.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251957|ref|ZP_07338128.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307244941|ref|ZP_07527038.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247116|ref|ZP_07529168.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249337|ref|ZP_07531331.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251660|ref|ZP_07533565.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307253895|ref|ZP_07535747.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258349|ref|ZP_07540090.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307260590|ref|ZP_07542282.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307262721|ref|ZP_07544348.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126096413|gb|ABN73241.1| HTH-type transcriptional regulator CysB [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875690|gb|ABY68738.1| HTH-type transcriptional regulator [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189914535|gb|ACE60787.1| HTH-type transcriptional regulator CysB [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649387|gb|EFL79572.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651404|gb|EFL81556.1| transcriptional regulator CysB [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854106|gb|EFM86314.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856365|gb|EFM88516.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858631|gb|EFM90693.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860857|gb|EFM92865.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863099|gb|EFM95041.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867533|gb|EFM99380.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306869667|gb|EFN01452.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871866|gb|EFN03583.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 327
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 197/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAETLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IAT +TQARY LP II++F ++P
Sbjct: 61 PAGEKIVAIARELLVKAQSIKSVAEEQTRPNRGVLRIATPNTQARYVLPPIIEKFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL+
Sbjct: 121 EVSLQLHQGSPSQIYDALMAGEVDLAITTEAQHLFEDAILLPCYLWNRSVIVKPDHPLVK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++E+ Y LITY F+G+ LD F+ + + P+IV ++D+IKTYV L
Sbjct: 181 FVNQSENLTVEELGKYDLITYTFGFTGQSDLDHAFNKEGILPHIVFTATDADVIKTYVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + D +L +I ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTPADSDLVAIDASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|271501136|ref|YP_003334161.1| LysR family transcriptional regulator [Dickeya dadantii Ech586]
gi|270344691|gb|ACZ77456.1| transcriptional regulator, LysR family [Dickeya dadantii Ech586]
Length = 317
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 191/295 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS D G L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVMAERILNDANHIRRLANLFSDNDVGQLVIATTHTQARYSLPGVIKAFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG P +I M+ + +ADI I TE L L + P Y+W + I++P H L
Sbjct: 121 QVQVVLNQGTPDEIVAMLESGEADIGIATEQLINVTSLAAFPWYRWHHAILLPEGHALAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L ++S PLITY +GR ++DR F+ LTP+I + +SD+IKTYVEL +G+
Sbjct: 181 EPVITLDKLSAVPLITYRQGITGRSRIDRAFTAAGLTPHISISAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKL 295
GI+A ++FD+ RD L + A HLF + +K+G R+Y + FI+L +P+L
Sbjct: 241 GIVADMSFDATRDPGLVRLDARHLFEANTVWLGLKRGQLQRNYTWKFIQLCNPEL 295
>gi|188533524|ref|YP_001907321.1| transcriptional regulator Cbl [Erwinia tasmaniensis Et1/99]
gi|188028566|emb|CAO96428.1| Transcriptional regulator cys regulon [Erwinia tasmaniensis Et1/99]
Length = 318
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 191/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + ++EA R FNLT+ A AL+TSQ GVS+ I +LE+EL ++IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIKEAARCEFNLTDVANALFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LPK+IK F + +P
Sbjct: 61 EPGKALLTIAERILDEAGKVRRLADVFTNESSGVLTIATTHTQARYSLPKVIKAFRVLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P++I M+ +AD+ I +E + + L + P + W + ++VP H L
Sbjct: 121 NVRLELNQGSPQEIVSMLTTGEADVGIASEQMVNNPALATFPWFSWHHALLVPKGHELEQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+SL ++ +PLITY +GR K+DR F L IVL +SD++KTYVEL +G+
Sbjct: 181 KQPVSLAALARFPLITYRQGITGRSKVDRAFQAASLQADIVLSAQDSDVVKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A A + L + A HLF + + +K+G R++V+ F++L + L+ + I
Sbjct: 241 GILADQACQLDEHALLTRLDARHLFESNTVWLGLKRGQLQRNFVWQFLELCNANLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|392979822|ref|YP_006478410.1| transcriptional regulator Cbl [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392325755|gb|AFM60708.1| transcriptional regulator Cbl [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 316
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 EVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWHHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+EI+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 ASPLTLEEIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGEREAGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|429744150|ref|ZP_19277660.1| putative HTH-type transcriptional regulator CysB [Neisseria sp.
oral taxon 020 str. F0370]
gi|429163580|gb|EKY05790.1| putative HTH-type transcriptional regulator CysB [Neisseria sp.
oral taxon 020 str. F0370]
Length = 316
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 192/306 (62%), Gaps = 2/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E + N N++EAA AL+TSQPGVSK I LEEEL I IFIR GKRI ++
Sbjct: 1 MKLQQLRYALEVYKHNLNVSEAADALFTSQPGVSKQIRLLEEELGIRIFIRSGKRIVSVS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L++ E I+ +I+ +KKIG EF+ D G LT+A THT ARY LP ++ +F +P
Sbjct: 61 QPGKAVLQTAERILHDIQNIKKIGSEFAKQDGGVLTLAATHTLARYVLPPVVAQFAKAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KV+L + QG P++I M+ D A+ +E+ +L I C W Y ++VP DHPLL
Sbjct: 121 KVRLVIRQGTPEEIRRMVSEGLTDFAVTSELSDYGTELRGISCSSWHYGLLVPNDHPLLD 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
++S++ I++YPLI Y+ +F L R F+ + P I + ++D +KTYV L +
Sbjct: 181 HKGALSVRAIASYPLIAYESAFVRGSVLSRAFAKADIAEPEIAVSVADNDALKTYVRLGL 240
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A A+D D +L + +L + ++++ +YLR YVY FI+L P L +
Sbjct: 241 GVGLMAKPAYDKTADADLTLVDIPYLTEPCHTGLLLRSDSYLRGYVYGFIELFDPSLTKA 300
Query: 299 FINKIL 304
++++L
Sbjct: 301 RLDQLL 306
>gi|440287074|ref|YP_007339839.1| transcriptional regulator [Enterobacteriaceae bacterium strain FGI
57]
gi|440046596|gb|AGB77654.1| transcriptional regulator [Enterobacteriaceae bacterium strain FGI
57]
Length = 316
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 196/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LT+ATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDGSGVLTVATTHTQARYSLPPVIKAFREIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 DVRLELVQGTPQEIETLLHNGGADIGIASERLSNDSTLVAFPWFRWHHNVLVPQDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +GI
Sbjct: 181 ITPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLLPDIVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D L + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQSGDVQESGKLVRLDTHHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|254363177|ref|ZP_04979226.1| LysR family transcriptional regulator [Mannheimia haemolytica
PHL213]
gi|153095071|gb|EDN75622.1| LysR family transcriptional regulator [Mannheimia haemolytica
PHL213]
Length = 327
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 198/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK ++GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESELGINIFERNGKHVKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IATT+TQARY LP +I++F ++P
Sbjct: 61 PAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNTQARYMLPSVIEKFKARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE D+ + +PCY W +IV +HPL
Sbjct: 121 EVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVLLPCYWWNRSVIVKPEHPLAA 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++++ Y LITY F+G+ LD F+ + + P IV ++D+IKTYV L
Sbjct: 181 FVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDYAFNKEGILPNIVFTATDADVIKTYVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + DK+L +I+ASHLF +++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTETDKDLVAINASHLFQPSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
R + K
Sbjct: 300 RVQVEK 305
>gi|242238732|ref|YP_002986913.1| transcriptional regulator CysB-like protein [Dickeya dadantii
Ech703]
gi|242130789|gb|ACS85091.1| transcriptional regulator, LysR family [Dickeya dadantii Ech703]
Length = 317
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 195/300 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A +L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESSRCNYNLTEVANSLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS D+G L IATTHTQARY+LP +I+EF +P
Sbjct: 61 EPGKELLVMAERILNDANHIRRLANLFSDNDSGQLVIATTHTQARYSLPTVIREFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + ADI I TE L + L + Y+W + I+VP HPL
Sbjct: 121 QVQLVLNQGTPDEIVSMLESGAADIGIATEQLMNTGSLAAFSYYRWNHAILVPEGHPLAS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++S PLITY +GR ++DR FS L+P++ + +SD+IKTYV L +G+
Sbjct: 181 EPVVTLDKLSAVPLITYRQGITGRSRIDRAFSAAGLSPHVAISAQDSDVIKTYVGLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GI+A +FD+ RD L + HLF + + +K+G R+Y + FI+L +P+L ++ I
Sbjct: 241 GIVADQSFDAERDVGLIKLDGRHLFEASTVWLGLKRGQLQRNYTWKFIQLCNPELTQEEI 300
>gi|386825431|ref|ZP_10112554.1| transcriptional regulator CysB-like protein [Serratia plymuthica
PRI-2C]
gi|386377601|gb|EIJ18415.1| transcriptional regulator CysB-like protein [Serratia plymuthica
PRI-2C]
Length = 317
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 194/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS+ D+G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVVAERILNDANNIRRLADVFSSNDSGQLHIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG+P++I M+ + +ADI I +E L + L + P Y+W + I+VP H L
Sbjct: 121 RVRVVLNQGSPEEIVGMLASGEADIGIASERLMSDESLAAFPYYRWHHTILVPEGHELTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ +S PLITY +GR KLD F LTP I L +SD+IKTYVEL +G+
Sbjct: 181 QPQVTLEMLSTLPLITYRQGITGRSKLDAAFKAAGLTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A ++++ RD L S++A HLF + +K+ R+Y + FI+L +P L+
Sbjct: 241 GVLADMSYEKERDHGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTLS 296
>gi|336251103|ref|YP_004594813.1| transcriptional regulator Cbl [Enterobacter aerogenes KCTC 2190]
gi|334737159|gb|AEG99534.1| transcriptional regulator Cbl [Enterobacter aerogenes KCTC 2190]
Length = 316
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 195/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 121 EVRLELVQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLIE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VTPLTLEAIARWPLITYRQGITGRSRIDEAFTRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDAREADTFTRLETRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|407692880|ref|YP_006817669.1| transcriptional regulator CysB [Actinobacillus suis H91-0380]
gi|407388937|gb|AFU19430.1| transcriptional regulator CysB [Actinobacillus suis H91-0380]
Length = 327
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 195/306 (63%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAETLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IAT +TQARY LP II++F ++P
Sbjct: 61 PAGEKIVAIARELLVKAQSIKSVAEEQTRPNCGVLRIATPNTQARYVLPPIIEKFKTKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL
Sbjct: 121 EVSLQLHQGSPSQIYDALMAGEVDLAITTEAQHLFEDAILLPCYLWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++E+ Y LITY F+G+ LD F+ + P+IV ++D+IKTY L
Sbjct: 181 FANQSQNLTVEELGKYDLITYTFGFTGQSDLDHAFNKVGILPHIVFTATDADVIKTYARL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A+ + D +L +I ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMAY-TEADSDLVAIDASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|345299924|ref|YP_004829282.1| LysR family transcriptional regulator [Enterobacter asburiae LF7a]
gi|345093861|gb|AEN65497.1| transcriptional regulator, LysR family [Enterobacter asburiae LF7a]
Length = 316
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 DVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWHHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+EI +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEEIGKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGEREVGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|268589501|ref|ZP_06123722.1| HTH-type transcriptional regulator CysB [Providencia rettgeri DSM
1131]
gi|291315169|gb|EFE55622.1| HTH-type transcriptional regulator CysB [Providencia rettgeri DSM
1131]
Length = 324
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 188/309 (60%), Gaps = 3/309 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L+IATTHTQARYALP IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIEAIRSVAGEHTYPDRGSLSIATTHTQARYALPPTIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYNDLIMLPCYHWNRCVVVQKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++IS Y ++TY F+GR +LD F L P I+ ++D+IKTYV L +GI
Sbjct: 181 KKNVTIEDISEYQIVTYTHGFTGRSELDVAFQKIGLEPKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D D +L I F + +++ K+ ++LRSY+Y F+ +P L R +
Sbjct: 241 GIIASMAVDPVSDSDLVVIDMRDKFSYSTTKIGFKRTSFLRSYMYDFMWRFAPHLTRDVV 300
Query: 301 NK---ILNN 306
+K I NN
Sbjct: 301 DKAVAIRNN 309
>gi|226330238|ref|ZP_03805756.1| hypothetical protein PROPEN_04151 [Proteus penneri ATCC 35198]
gi|225201033|gb|EEG83387.1| transcriptional regulator CysB [Proteus penneri ATCC 35198]
Length = 324
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 184/302 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ LYTSQPG+SK I LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNNDLNVSTTAERLYTSQPGISKQIRMLEDELGIQIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ + E ++ E + D G+L+IATTHTQARY LP +IK F ++P
Sbjct: 61 PAGEEIVRLSREILSKTEAIRSAAGEHTYPDRGSLSIATTHTQARYVLPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + ++D AI TE L + L+ +PCY+W +++V DHPL
Sbjct: 121 DVSLHMNQGSPTQIAEDVCRGKSDFAIATESLHLYNDLVMLPCYRWNRIVVVSKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++LKE+++Y ++TY F+GR LD F L P IV ++D+IKTYV L +GI
Sbjct: 181 KREVTLKELADYDIVTYTQGFTGRSDLDDAFGKVGLKPKIVFTATDADVIKTYVRLHLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD D +L +I F + +++ ++ +LR Y+Y F+ +P L R I
Sbjct: 241 GVIASMAFDPVLDSDLVAIDMRDKFSYSTTKIAFRRSGFLRGYMYDFMWRFAPHLTRNLI 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|270262351|ref|ZP_06190623.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|333927847|ref|YP_004501426.1| LysR family transcriptional regulator [Serratia sp. AS12]
gi|333932801|ref|YP_004506379.1| LysR family transcriptional regulator [Serratia plymuthica AS9]
gi|386329671|ref|YP_006025841.1| LysR family transcriptional regulator [Serratia sp. AS13]
gi|421784098|ref|ZP_16220540.1| cys regulon transcriptional regulator Cbl [Serratia plymuthica A30]
gi|270044227|gb|EFA17319.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|333474408|gb|AEF46118.1| transcriptional regulator, LysR family [Serratia plymuthica AS9]
gi|333491907|gb|AEF51069.1| transcriptional regulator, LysR family [Serratia sp. AS12]
gi|333962004|gb|AEG28777.1| transcriptional regulator, LysR family [Serratia sp. AS13]
gi|407753537|gb|EKF63678.1| cys regulon transcriptional regulator Cbl [Serratia plymuthica A30]
Length = 317
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 194/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS+ D+G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVVAERILNDANNIRRLADVFSSNDSGQLHIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG+P++I M+ + +ADI I +E L + L + P Y+W + I+VP H L
Sbjct: 121 RVRVVLNQGSPEEIVAMLASGEADIGIASERLMSDESLAAFPYYRWHHTILVPEGHELTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL +G+
Sbjct: 181 QPQVTLEMLSTLPLITYRQGITGRSRLDAAFKAAGLTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A ++++ RD L S++A HLF + +K+ R+Y + FI+L +P L+
Sbjct: 241 GVLADMSYEKERDHGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTLS 296
>gi|359300373|ref|ZP_09186212.1| transcriptional regulator CysB [Haemophilus [parainfluenzae] CCUG
13788]
gi|402307131|ref|ZP_10826159.1| cys regulon transcriptional activator CysB [Haemophilus sputorum HK
2154]
gi|400373356|gb|EJP26289.1| cys regulon transcriptional activator CysB [Haemophilus sputorum HK
2154]
Length = 327
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 196/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ALYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAEALYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I + ++ +++ ++ + +E + + G L IAT +TQARY LP +I++F ++P
Sbjct: 61 PAGEKITQIARELLVKVQSIRAVAEEQTRPNRGVLRIATPNTQARYVLPAVIEKFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI E + N D+AI TE ++ I +PCY W +IV +HPL
Sbjct: 121 NVSLHLHQGSPTQIYEALMNGTVDLAITTEAQYLFEETILLPCYTWNRSVIVKPEHPLAQ 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++++E+S Y LITY F+G+ LD+ F+ + P IV ++D+IKTYV L
Sbjct: 181 FANHSTDLTVEELSKYDLITYTFGFTGQSDLDKAFNQVGILPNIVFTATDADVIKTYVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + D +L +I ASHLF +++++ K+ T+LR+Y+Y FI+ SP L
Sbjct: 241 GLGVGIMASMA-HTEADSDLIAIDASHLFSPSMTQIAFKRSTFLRNYMYDFIQYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMEVEK 305
>gi|374623171|ref|ZP_09695686.1| transcriptional regulator CysB [Ectothiorhodospira sp. PHS-1]
gi|373942287|gb|EHQ52832.1| transcriptional regulator CysB [Ectothiorhodospira sp. PHS-1]
Length = 324
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 198/305 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+++ V N N+TEAA+ L+TSQPGVSK + LEEEL ++IF R GK +T
Sbjct: 1 MKLQQLRYLKAIVENNLNVTEAAERLFTSQPGVSKQVKLLEEELGLEIFHRSGKNFSHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ IL E I+ E++ + + ++F + G L IATTHTQARY LP +I +F ++P
Sbjct: 61 PAGRQILARAENILSEVQNIHALAEDFRDEERGTLRIATTHTQARYFLPPLITQFRRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG P QI++M + + D AI TE ++ + +L+ IP Y+W + ++V HPL
Sbjct: 121 RVHLLIHQGTPVQISQMAASGEVDFAIATEAIALNRELLMIPAYRWHHCVVVDKGHPLTG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ S++L++++ YP++TY FSGR +L+++F+ L P IVL +SD+IKTYV L +GI
Sbjct: 181 VKSLALEDVAGYPIVTYVHGFSGRGRLEQDFANAGLAPEIVLSAADSDVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIA +A++ +D +L + A LF ++RV ++G YLR ++ F+ LL+P + +
Sbjct: 241 GIIAHMAYEPGQDTDLAYLDAKSLFRENVTRVGFRKGVYLRRFMCHFMDLLAPHAGEERV 300
Query: 301 NKILN 305
+ LN
Sbjct: 301 QEALN 305
>gi|22034312|gb|AAL01554.1| Cbl [Escherichia fergusonii]
Length = 316
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 DVRLELIQGTPQEIDVLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L++I+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VTPLTLEDIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + +NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGERETENLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|365971215|ref|YP_004952776.1| HTH-type transcriptional regulator cbl [Enterobacter cloacae
EcWSU1]
gi|365750128|gb|AEW74355.1| HTH-type transcriptional regulator cbl [Enterobacter cloacae
EcWSU1]
Length = 316
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 198/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P+DHPL
Sbjct: 121 DVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPVDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L++I+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VTPLTLEDIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + +NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGERETENLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|307256158|ref|ZP_07537945.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306865339|gb|EFM97235.1| HTH-type transcriptional regulator cysB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 327
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 197/306 (64%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAETLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IAT +TQARY LP II++F ++P
Sbjct: 61 PAGEKIVAIARELLVKAQSIKSVAEEQTRPNRGVLRIATPNTQARYVLPPIIEKFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL+
Sbjct: 121 EVSLQLHQGSPSQIYDALMAGEVDLAITTEAQHLFEDAILLPCYLWNRSVIVKPDHPLVK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++E+ Y LITY F+G+ LD F+ + + P+IV ++D+IKT+V L
Sbjct: 181 FVNQSENLTVEELGKYDLITYTFGFTGQSDLDHAFNKEGILPHIVFTATDADVIKTFVRL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + D +L +I ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTPADSDLVAIDASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|296103660|ref|YP_003613806.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058119|gb|ADF62857.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 316
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFREIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++PLDHPL
Sbjct: 121 DVRLELIQGTPQEIEMLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPLDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEAIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGEGDTGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|197285181|ref|YP_002151053.1| cys regulon transcriptional activator [Proteus mirabilis HI4320]
gi|227355613|ref|ZP_03840007.1| cys regulon transcriptional activator (LysR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
gi|425068133|ref|ZP_18471249.1| HTH-type transcriptional regulator CysB [Proteus mirabilis WGLW6]
gi|425072467|ref|ZP_18475573.1| HTH-type transcriptional regulator CysB [Proteus mirabilis WGLW4]
gi|194682668|emb|CAR42798.1| cys regulon transcriptional activator (LysR-family transcriptional
regulator) [Proteus mirabilis HI4320]
gi|227164220|gb|EEI49113.1| cys regulon transcriptional activator (LysR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
gi|404597137|gb|EKA97643.1| HTH-type transcriptional regulator CysB [Proteus mirabilis WGLW4]
gi|404600516|gb|EKB00951.1| HTH-type transcriptional regulator CysB [Proteus mirabilis WGLW6]
Length = 324
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 184/302 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ LYTSQPG+SK I LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNNDLNVSTTAERLYTSQPGISKQIRMLEDELGIQIFSRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+R I+ + E ++ E + D G+L+IATTHTQARY LP +IK F ++P
Sbjct: 61 PAGEEIVRLSREILSKTEAIRSAAGEHTYPDRGSLSIATTHTQARYVLPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + ++D AI TE L + L+ +PCY+W +++V DHPL
Sbjct: 121 EVSLHMNQGSPTQIAEDVCRGKSDFAIATESLHLYNDLVMLPCYRWNRIVVVTKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+E++ Y ++TY F+GR LD F L P IV ++D+IKTYV L +GI
Sbjct: 181 KREVTLQELATYDIVTYTHGFTGRSDLDEAFGKVGLKPKIVFTATDADVIKTYVRLHLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IAS+AFD D +L +I F + +++ ++ +LR Y+Y F+ +P L R +
Sbjct: 241 GVIASMAFDPMLDSDLVAIDMRDKFSYSTTKIAFRRSGFLRGYMYDFMWRFAPHLTRNLV 300
Query: 301 NK 302
+
Sbjct: 301 EQ 302
>gi|157371157|ref|YP_001479146.1| transcriptional regulator CysB-like protein [Serratia
proteamaculans 568]
gi|157322921|gb|ABV42018.1| transcriptional regulator, LysR family [Serratia proteamaculans
568]
Length = 317
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 193/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ FS+ D G L IATTHTQARY+LP +IKEF +P
Sbjct: 61 EPGKELLVVAERILNDANNIRRLADVFSSNDAGQLHIATTHTQARYSLPGVIKEFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ L QG+P++I M+ + +ADI I +E L + L + P Y+W + I+VP H L
Sbjct: 121 RVRVVLNQGSPEEIVGMLASGEADIGIASERLMSDESLAAFPYYRWHHTILVPEGHELTR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ +S PLITY +GR +LD F LTP I L +SD+IKTYVEL +G+
Sbjct: 181 QPQVTLEMLSTLPLITYRQGITGRSRLDSAFKAAGLTPDIALSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A ++++ RD L S++A HLF + +K+ R+Y + FI+L +P L+
Sbjct: 241 GVLADMSYEKERDHGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTLS 296
>gi|422008767|ref|ZP_16355751.1| LysR family transcriptional regulator [Providencia rettgeri Dmel1]
gi|414095240|gb|EKT56903.1| LysR family transcriptional regulator [Providencia rettgeri Dmel1]
Length = 324
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 188/309 (60%), Gaps = 3/309 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L+IATTHTQARYALP IK F ++P
Sbjct: 61 PAGEEVVRISREVLSKIEAIRSVAGEHTYPDRGSLSIATTHTQARYALPPTIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L + LI +PCY W ++V DHPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYNDLIMLPCYHWNRCVVVQKDHPLAT 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++I+ Y ++TY F+GR +LD F L P I+ ++D+IKTYV L +GI
Sbjct: 181 KKNVTIEDIAEYQIVTYTHGFTGRSELDVAFQKIGLEPKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D D +L I F + +++ K+ ++LRSY+Y F+ +P L R +
Sbjct: 241 GIIASMAVDPVSDSDLVVIDMRDKFSYSTTKIGFKRTSFLRSYMYDFMWRFAPHLTRDVV 300
Query: 301 NK---ILNN 306
+K I NN
Sbjct: 301 DKAVAIRNN 309
>gi|422334536|ref|ZP_16415542.1| HTH-type transcriptional regulator CysB [Escherichia coli
4_1_47FAA]
gi|373244447|gb|EHP63931.1| HTH-type transcriptional regulator CysB [Escherichia coli
4_1_47FAA]
Length = 285
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 176/280 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYL 280
G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFF 280
>gi|322515104|ref|ZP_08068111.1| HTH-type transcriptional regulator CysB [Actinobacillus ureae ATCC
25976]
gi|322118910|gb|EFX91092.1| HTH-type transcriptional regulator CysB [Actinobacillus ureae ATCC
25976]
Length = 327
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 195/306 (63%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA+ LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAETLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + +K + +E + + G L IAT +TQARY LP II++F ++P
Sbjct: 61 PSGEKIVAIARELLVKAQSIKSVAEEQTRPNRGVLRIATPNTQARYVLPPIIEKFKTKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL
Sbjct: 121 EVSLQLHQGSPSQIYDALMAGEVDLAITTEAQHLFEDAILLPCYLWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+++++E+ Y LITY F+G+ LD F+ + P+IV ++D+IKTY L
Sbjct: 181 FANQSQNLTVEELGKYDLITYTFGFTGQSDLDHAFNKVGILPHIVFTATDADVIKTYARL 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A+ + D +L +I ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMAY-TEADSDLVAIDASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|257465537|ref|ZP_05629908.1| transcriptional regulator CysB [Actinobacillus minor 202]
gi|257451197|gb|EEV25240.1| transcriptional regulator CysB [Actinobacillus minor 202]
Length = 327
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 199/306 (65%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA++LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAESLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + ++ + +E + ++G L IA+ +TQARY LPK+I++F ++P
Sbjct: 61 PAGEKIISIARELLVKAQSIRAVAEEQTRPNSGVLRIASPNTQARYVLPKVIEQFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI TE ++ I +PCY W +IV DHPL
Sbjct: 121 NVSLHLHQGSPTQIYDALMAGEVDLAITTEAQYLFEEAILLPCYMWNRSVIVKPDHPLAK 180
Query: 181 LNS----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+ ++++E+ Y LITY F+G+ LD+ F+ + P IV ++D+IKTYV +
Sbjct: 181 YANQPHLLTVEELGKYDLITYTFGFTGQSDLDKAFNKVGILPNIVFTATDADVIKTYVRI 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + D +L +I+ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTEMDSDLVAINASHLFQSSMTQIAFKRGTFLRNYMYDFINFFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|334124728|ref|ZP_08498726.1| Cys regulon transcriptional regulator Cbl [Enterobacter hormaechei
ATCC 49162]
gi|333388099|gb|EGK59284.1| Cys regulon transcriptional regulator Cbl [Enterobacter hormaechei
ATCC 49162]
Length = 316
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 195/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPRVIKAFREIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + +++P DHPL
Sbjct: 121 DVRLELIQGTPQEIEVLLHNGGADIGIASERLSNDPLLVAFPWFRWHHSLLLPADHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+EI +PLITY +GR ++D F + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEEIVKWPLITYRQGITGRSRIDEAFKRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGEYEAGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|240947968|ref|ZP_04752394.1| transcriptional regulator CysB [Actinobacillus minor NM305]
gi|240297724|gb|EER48185.1| transcriptional regulator CysB [Actinobacillus minor NM305]
Length = 327
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 199/306 (65%), Gaps = 5/306 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA++LYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAAESLYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + ++ + +E + ++G L IA+ +TQARY LPK+I++F ++P
Sbjct: 61 PAGEKIISIARELLVKAQSIRAVAEEQTRPNSGVLRIASPNTQARYVLPKVIEQFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI TE ++ I +PCY W +IV DHPL
Sbjct: 121 NVSLHLHQGSPTQIYDALMAGEVDLAITTEAQYLFEEAILLPCYMWNRSVIVKPDHPLAK 180
Query: 181 LNS----ISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
+ ++++E+ Y LITY F+G+ LD+ F+ + P IV ++D+IKTYV +
Sbjct: 181 YANQPHLLTVEELGKYDLITYTFGFTGQSDLDKAFNKVGILPNIVFTATDADVIKTYVRI 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A + D +L +I+ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMA-HTEMDSDLVAINASHLFQSSMTQIAFKRGTFLRNYMYDFINFFSPHLT 299
Query: 297 RKFINK 302
+ + K
Sbjct: 300 KMQVEK 305
>gi|288549818|ref|ZP_05968302.2| cys regulon transcriptional regulator Cbl [Enterobacter
cancerogenus ATCC 35316]
gi|288317536|gb|EFC56474.1| cys regulon transcriptional regulator Cbl [Enterobacter
cancerogenus ATCC 35316]
Length = 324
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 9 VNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 68
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 69 EPGKALLAIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 128
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P DHPL
Sbjct: 129 DVRLELIQGTPQEIDVLLQNGGADIGIASERLSTDPLLVAFPWFRWHHSLLLPDDHPLNQ 188
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L +I +PLITY +GR ++D FS + LTP +VL +SD+IKTYVEL +GI
Sbjct: 189 VSPLTLDDIVKWPLITYRQGITGRSRIDEAFSRKGLTPDVVLSAQDSDVIKTYVELGLGI 248
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + + + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 249 GLVAEQSGGEHEEGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 304
>gi|444350721|ref|YP_007386865.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Enterobacter aerogenes EA1509E]
gi|443901551|emb|CCG29325.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Enterobacter aerogenes EA1509E]
Length = 324
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 195/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 9 VNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 68
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 69 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 128
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 129 EVRLELVQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLIE 188
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 189 VAPLTLEAIARWPLITYRQGITGRSRIDEAFTRKGLMPDIVLSAQDSDVIKTYVELGLGV 248
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 249 GLVAEQSGDAREADTFTRLETRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 304
>gi|354598300|ref|ZP_09016317.1| transcriptional regulator, LysR family [Brenneria sp. EniD312]
gi|353676235|gb|EHD22268.1| transcriptional regulator, LysR family [Brenneria sp. EniD312]
Length = 317
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP++IK F +P
Sbjct: 61 EPGKELLIVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPQVIKAFRALYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P++I M+ + +ADI I +E L L + P Y+W + I+VP DHPL
Sbjct: 121 QVRLVLNQGTPEEIVTMLHSGEADIGIASERLINDASLAAFPYYRWHHSIVVPEDHPLAR 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L ++ PLITY +GR ++DR F + P I L +SD+IKTYVEL +G+
Sbjct: 181 EPVVTLDMLNAAPLITYRQGITGRSRVDRAFQAAGMAPDITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A A+D+ RDK L ++A HLF + +K+ R+Y + FI+L + +L+
Sbjct: 241 GILADKAYDAVRDKGLVRLNAEHLFEANTVWLGLKKNQLQRNYAWKFIQLCNTELS 296
>gi|375261726|ref|YP_005020896.1| transcriptional regulator Cbl [Klebsiella oxytoca KCTC 1686]
gi|397658784|ref|YP_006499486.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella oxytoca E718]
gi|365911204|gb|AEX06657.1| transcriptional regulator Cbl [Klebsiella oxytoca KCTC 1686]
gi|394347038|gb|AFN33159.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella oxytoca E718]
Length = 316
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 194/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 DVRLELVQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VTPLTLDAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQSGDARESDTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|402842673|ref|ZP_10891082.1| cys regulon transcriptional regulator Cbl [Klebsiella sp. OBRC7]
gi|423103771|ref|ZP_17091473.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5242]
gi|376385413|gb|EHS98134.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5242]
gi|402278866|gb|EJU27917.1| cys regulon transcriptional regulator Cbl [Klebsiella sp. OBRC7]
Length = 316
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 194/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLAIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 DVRLELVQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VTPLTLDAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQSGDARESDTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|146312209|ref|YP_001177283.1| transcriptional regulator Cbl [Enterobacter sp. 638]
gi|145319085|gb|ABP61232.1| transcriptional regulator, LysR family [Enterobacter sp. 638]
Length = 316
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R++FNLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDFNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKVFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P DHPL
Sbjct: 121 EVRLELIQGTPQEIEVLLQNGGADIGIASERLSNDPLLVAFPWFRWHHSLLLPSDHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I +PLITY +GR ++D F+ + +TP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEAIGKWPLITYRQGITGRSRIDEAFNRKGITPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A + + +L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GIVAEQSGGEHESSDLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|422014114|ref|ZP_16360730.1| LysR family transcriptional regulator [Providencia burhodogranariea
DSM 19968]
gi|414102136|gb|EKT63732.1| LysR family transcriptional regulator [Providencia burhodogranariea
DSM 19968]
Length = 324
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 184/304 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVIRISREVLSKIEAIRSVAGEHTYPDRGTLNIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W ++V HPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRCVVVQKGHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++ YP++TY F+GR +LD F L P I+ ++D+IKTYV L +GI
Sbjct: 181 KKNVTIEDVAQYPIVTYTHGFTGRSELDVAFQKANLEPKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A + D +L I F + +++ K+ ++LRSY+Y FI +P L R +
Sbjct: 241 GIIASMAANPELDSDLVFIDMRDKFSYSTTKIGFKRTSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DRAI 304
>gi|401764341|ref|YP_006579348.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400175875|gb|AFP70724.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 316
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 197/296 (66%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I +++N ADI I +E LS L++ P ++W + +++P DHPL
Sbjct: 121 DVRLELIQGTPQEIEMLLQNGGADIGIASERLSNDPLLVAFPWFRWYHSLLLPADHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L++I+ +PLITY +GR ++D F+ + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEDIAKWPLITYRQGITGRSRIDEAFNRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + +L + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSSGEREGGDLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|421724398|ref|ZP_16163621.1| transcriptional regulator Cbl [Klebsiella oxytoca M5al]
gi|423124623|ref|ZP_17112302.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5250]
gi|376400068|gb|EHT12681.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5250]
gi|410374798|gb|EKP29456.1| transcriptional regulator Cbl [Klebsiella oxytoca M5al]
Length = 316
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 194/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLLIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 121 DVRLELVQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VTPLTLDAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAEQSGDARESDTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|419958307|ref|ZP_14474371.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
GS1]
gi|388606565|gb|EIM35771.1| transcriptional regulator Cbl [Enterobacter cloacae subsp. cloacae
GS1]
Length = 316
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 194/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLTIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPTVIKAFREIFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + +++P DHPL
Sbjct: 121 DVRLELIQGTPQEIEVLLHNGGADIGIASERLSNDPLLVAFPWFRWHHSLLLPADHPLNQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+EI +PLITY +GR ++D F + LTP +VL +SD+IKTYVEL +GI
Sbjct: 181 VSPLTLEEIVKWPLITYRQGITGRSRIDEAFKRKGLTPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + NL + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGGEYEAGNLVRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|423121103|ref|ZP_17108787.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5246]
gi|376395733|gb|EHT08379.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5246]
Length = 324
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 9 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 68
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 69 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 128
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL+
Sbjct: 129 DVRLELIQGTPQEIEALLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLVQ 188
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ IS +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 189 TTPLTLEAISRWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 248
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 249 GLVAEQSGDARESDTFTRLETRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 304
>gi|422022811|ref|ZP_16369317.1| LysR family transcriptional regulator [Providencia sneebia DSM
19967]
gi|414094541|gb|EKT56205.1| LysR family transcriptional regulator [Providencia sneebia DSM
19967]
Length = 324
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 184/304 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSSTAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVIRISREVLSKIEAIRSVAGEHTYPDRGSLRIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W ++V HPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRCVVVQKGHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++I+ Y ++TY F+GR +LD F L P I+ ++D+IKTYV L +GI
Sbjct: 181 KKNVTIEDIAQYQIVTYTHGFTGRSELDVAFQKANLEPKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A + D +L I F + +++ K+ T+LRSY+Y FI +P L R +
Sbjct: 241 GIIASMAVNPELDSDLAVIDMRDKFSYSTTKIGFKRTTFLRSYMYDFIWRFAPHLTRDIV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DRAI 304
>gi|418019444|ref|ZP_12658930.1| Transcriptional regulator [Candidatus Regiella insecticola R5.15]
gi|347605201|gb|EGY29681.1| Transcriptional regulator [Candidatus Regiella insecticola R5.15]
Length = 282
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 177/282 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ L+TSQPG+SK I LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVHHNLNVSSTAQGLFTSQPGISKQIKMLEDELGILIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ I+ +I+ +K + E++ D G+L IATT+TQARY LPKIIK F +P
Sbjct: 61 PAGKEIIAIAGEILSKIDAIKAVAGEYTCPDKGSLCIATTYTQARYVLPKIIKSFIKHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI + + AD AI TE L D LI +PCY W ++V DHPL
Sbjct: 121 CVSLHMHQGSPVQIAQAVVKGDADFAITTEALHLYDDLIMLPCYHWNRGVVVRQDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++ E++ YP++TY L F+GR LD F LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKNLTITELAAYPIVTYTLGFTGRATLDSAFKRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRS 282
GIIA++A + +D +L ++ A +F + +++ ++ T+LRS
Sbjct: 241 GIIANMAVNPQQDPDLVTVEAKEIFTCSTTKIGFRRSTFLRS 282
>gi|387771544|ref|ZP_10127703.1| transcriptional regulator CysB [Haemophilus parahaemolyticus HK385]
gi|386908594|gb|EIJ73283.1| transcriptional regulator CysB [Haemophilus parahaemolyticus HK385]
Length = 327
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 192/301 (63%), Gaps = 5/301 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA ALYTSQPG+SK + LE EL I+IF R+GK I+GLT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAADALYTSQPGISKQVRLLESELGINIFERNGKHIKGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + ++ + +E + ++G L IA+ +TQARY LP +I+ F ++P
Sbjct: 61 PAGEKIVAISRELLVKAQSIRAVAEEQTRPNSGVLRIASPNTQARYVLPSVIELFKARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL
Sbjct: 121 NVSLHLHQGSPTQIYDALMAGEVDLAITTEAQYLFEDAILLPCYMWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++++E+ Y LITY F+G+ LD+ F+ + + P IV ++D+IKTYV +
Sbjct: 181 YVNQPEKLTVEELGKYDLITYTFGFTGQSDLDKAFNKEGILPNIVFTATDADVIKTYVRI 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A N D +L +I+ASHLF +++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMAHTEN-DNDLLAINASHLFQPSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 R 297
R
Sbjct: 300 R 300
>gi|419028462|ref|ZP_13575645.1| cysB [Escherichia coli DEC2C]
gi|377882240|gb|EHU46786.1| cysB [Escherichia coli DEC2C]
Length = 276
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 172/272 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI + + AD AI TE L + L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I+++E++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRV 272
G+IAS+A D D +L + A +F + +++
Sbjct: 241 GVIASMAVDPVADPDLVRVDAHDIFSHSTTKI 272
>gi|253687786|ref|YP_003016976.1| LysR family transcriptional regulator [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754364|gb|ACT12440.1| transcriptional regulator, LysR family [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 317
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP DHPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 ERVITLEMLNAEPLITYRQGITGRSRLDRAFQAVGMSPDITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +++D RD L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GIVADMSYDPARDTGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|288934535|ref|YP_003438594.1| LysR family transcriptional regulator [Klebsiella variicola At-22]
gi|288889244|gb|ADC57562.1| transcriptional regulator, LysR family [Klebsiella variicola At-22]
Length = 316
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 193/296 (65%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL
Sbjct: 121 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D++ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDASEADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|403057859|ref|YP_006646076.1| transcriptional regulator CysB-like protein [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402805185|gb|AFR02823.1| transcriptional regulator CysB-like protein [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 317
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP HPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEHHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 EPVITLEMLNAEPLITYRQGITGRSRLDRAFQAVGMSPDITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++FD RDK L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GIVADMSFDPVRDKGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|423109165|ref|ZP_17096860.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5243]
gi|423115101|ref|ZP_17102792.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5245]
gi|376383359|gb|EHS96087.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5243]
gi|376383976|gb|EHS96703.1| HTH-type transcriptional regulator cbl [Klebsiella oxytoca 10-5245]
Length = 324
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 194/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 9 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 68
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 69 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 128
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++ N ADI I +E LS L++ P ++W + ++VP DHPL
Sbjct: 129 DVRLELVQGTPQEIETLLHNGGADIGIASERLSNDPTLVAFPWFRWHHSLLVPKDHPLTQ 188
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 189 VTPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 248
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 249 GLVAEQSGDERESDTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 308
Query: 301 NK 302
+
Sbjct: 309 KR 310
>gi|227114845|ref|ZP_03828501.1| transcriptional regulator CysB-like protein [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|227327207|ref|ZP_03831231.1| transcriptional regulator CysB-like protein [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 317
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP HPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEHHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 EPVITLEMLNAEPLITYRQGITGRSRLDRAFQAVGMSPDITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A ++FD RDK L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GIVADMSFDPVRDKGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|386035571|ref|YP_005955484.1| transcriptional regulator Cbl [Klebsiella pneumoniae KCTC 2242]
gi|424831363|ref|ZP_18256091.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425075995|ref|ZP_18479098.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425086628|ref|ZP_18489721.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|732200|sp|Q08598.1|CBL_KLEAE RecName: Full=HTH-type transcriptional regulator cbl
gi|538792|pir||C47099 lysR homolog, nac 3'-region - Klebsiella pneumoniae
gi|149244|gb|AAA18174.1| Lys R member [Enterobacter aerogenes]
gi|339762699|gb|AEJ98919.1| transcriptional regulator Cbl [Klebsiella pneumoniae KCTC 2242]
gi|405593499|gb|EKB66940.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405603352|gb|EKB76473.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|414708797|emb|CCN30501.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 316
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL
Sbjct: 121 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|206579366|ref|YP_002237658.1| transcriptional regulator Cbl [Klebsiella pneumoniae 342]
gi|238895497|ref|YP_002920232.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|290508735|ref|ZP_06548106.1| HTH-type transcriptional regulator cbl [Klebsiella sp. 1_1_55]
gi|365137550|ref|ZP_09344265.1| HTH-type transcriptional regulator cbl [Klebsiella sp. 4_1_44FAA]
gi|378979617|ref|YP_005227758.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402780030|ref|YP_006635576.1| alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|424932697|ref|ZP_18351069.1| Transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425082265|ref|ZP_18485362.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|425092361|ref|ZP_18495446.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428934556|ref|ZP_19008071.1| transcriptional regulator Cbl [Klebsiella pneumoniae JHCK1]
gi|449059171|ref|ZP_21736872.1| transcriptional regulator Cbl [Klebsiella pneumoniae hvKP1]
gi|206568424|gb|ACI10200.1| transcriptional regulator Cbl [Klebsiella pneumoniae 342]
gi|238547814|dbj|BAH64165.1| transcriptional regulator of cys regulon [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|289778129|gb|EFD86126.1| HTH-type transcriptional regulator cbl [Klebsiella sp. 1_1_55]
gi|363655979|gb|EHL94762.1| HTH-type transcriptional regulator cbl [Klebsiella sp. 4_1_44FAA]
gi|364519028|gb|AEW62156.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402540941|gb|AFQ65090.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405600517|gb|EKB73682.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|405611587|gb|EKB84353.1| HTH-type transcriptional regulator cbl [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407806884|gb|EKF78135.1| Transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|426302567|gb|EKV64765.1| transcriptional regulator Cbl [Klebsiella pneumoniae JHCK1]
gi|448875126|gb|EMB10152.1| transcriptional regulator Cbl [Klebsiella pneumoniae hvKP1]
Length = 316
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL
Sbjct: 121 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|419973975|ref|ZP_14489397.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979367|ref|ZP_14494659.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985271|ref|ZP_14500413.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990597|ref|ZP_14505568.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997809|ref|ZP_14512602.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420002642|ref|ZP_14517292.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420011231|ref|ZP_14525688.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014931|ref|ZP_14529235.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019932|ref|ZP_14534122.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420025783|ref|ZP_14539790.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030504|ref|ZP_14544330.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420036334|ref|ZP_14549994.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420043131|ref|ZP_14556621.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048873|ref|ZP_14562184.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053924|ref|ZP_14567100.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059270|ref|ZP_14572278.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066021|ref|ZP_14578824.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073305|ref|ZP_14585933.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076395|ref|ZP_14588866.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084446|ref|ZP_14596704.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421910150|ref|ZP_16339943.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421919112|ref|ZP_16348622.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428148202|ref|ZP_18996088.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428939677|ref|ZP_19012781.1| transcriptional regulator Cbl [Klebsiella pneumoniae VA360]
gi|397347222|gb|EJJ40331.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349315|gb|EJJ42410.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397352319|gb|EJJ45399.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397361818|gb|EJJ54475.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397366610|gb|EJJ59226.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370666|gb|EJJ63230.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397376292|gb|EJJ68553.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397377451|gb|EJJ69685.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397388322|gb|EJJ80300.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397396720|gb|EJJ88407.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397401760|gb|EJJ93379.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397406656|gb|EJJ98067.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397414285|gb|EJK05485.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397414945|gb|EJK06137.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397423661|gb|EJK14585.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397430828|gb|EJK21516.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435687|gb|EJK26295.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438113|gb|EJK28637.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447101|gb|EJK37301.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450197|gb|EJK40309.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410116045|emb|CCM82568.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118751|emb|CCM91247.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426303629|gb|EKV65795.1| transcriptional regulator Cbl [Klebsiella pneumoniae VA360]
gi|427541725|emb|CCM92226.1| Alkanesulfonate utilization operon LysR-family regulator CbI
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 316
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL
Sbjct: 121 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|386390333|ref|ZP_10075124.1| transcriptional regulator CysB [Haemophilus paraphrohaemolyticus
HK411]
gi|385693368|gb|EIG24017.1| transcriptional regulator CysB [Haemophilus paraphrohaemolyticus
HK411]
Length = 327
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 193/301 (64%), Gaps = 5/301 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V QN N+TEAA ALYTSQPG+SK + LE EL I+IF R+GK I+ LT
Sbjct: 1 MKLQQLRYIVEIVNQNLNITEAADALYTSQPGISKQVRLLESELGINIFERNGKHIKDLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + ++ + +E + ++G L IA+ +TQARY LP +I+ F ++P
Sbjct: 61 PAGEKIVAISRELLVKAQSIRAVAEEQTRPNSGVLRIASPNTQARYVLPSVIELFKAKYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L L QG+P QI + + + D+AI TE + I +PCY W +IV DHPL
Sbjct: 121 NVSLHLHQGSPTQIYDALMAGEVDLAITTEAQYLFEDAILLPCYMWNRSVIVKPDHPLAK 180
Query: 181 L----NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVEL 236
++++E+ Y LITY F+G+ LD+ F+ + + P IV ++D+IKTYV +
Sbjct: 181 YVNQPEQLTVEELGKYDLITYTFGFTGQSDLDKAFNKEGILPNIVFTATDADVIKTYVRI 240
Query: 237 RMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+G+GI+AS+A+ + D +L +I+ASHLF ++++++ K+GT+LR+Y+Y FI SP L
Sbjct: 241 GLGVGIMASMAY-TESDSDLVAINASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLT 299
Query: 297 R 297
R
Sbjct: 300 R 300
>gi|437369994|ref|ZP_20749123.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435207156|gb|ELN90647.1| transcriptional regulator CysB, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
Length = 257
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 164/256 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A+ LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ I+R ++ +++ +K + E + D G+L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + AD AI TE L D L+ +PCY W I+V DHPL
Sbjct: 121 RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAA 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S++++ ++ YPL+TY F+GR +LD F+ LTP IV ++D+IKTYV L +G+
Sbjct: 181 TSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNL 256
G+IAS+A D D +L
Sbjct: 241 GVIASMAVDPLADPDL 256
>gi|152979358|ref|YP_001344987.1| transcriptional regulator CysB [Actinobacillus succinogenes 130Z]
gi|150841081|gb|ABR75052.1| transcriptional regulator, LysR family [Actinobacillus succinogenes
130Z]
Length = 323
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 194/297 (65%), Gaps = 1/297 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+V E V QN N+TEAA ALYTSQPG+SK + LEEEL ++IF R+GK I+ +T
Sbjct: 1 MKLQQLRYVVEIVNQNLNVTEAANALYTSQPGISKQVRLLEEELGLEIFERNGKHIKSVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ I+ ++ + + ++ I E++ + G L IATT+TQARY LP +I++F+ ++P
Sbjct: 61 PAGKKIVAIARELLVKTQAIRAIADEYTQPNHGVLRIATTNTQARYMLPGVIEKFSKRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P Q+ + + + + D AI TE D +I +PCY+W I+V HPL
Sbjct: 121 DVSLHVHQGSPNQLYDALLSGEVDFAITTEAQYLFDDVILLPCYKWNRSIVVKPGHPLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++E+S YPL+TY F+G LD F+ L P IV ++D+IKTYV L +G+
Sbjct: 181 VKNVTIEELSKYPLVTYTFGFTGVSDLDYAFNNAGLLPNIVFTATDADVIKTYVRLGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GIIAS+A + D +L +I ASHLF ++ +++ K T+LR+Y+Y FI+ SP L R
Sbjct: 241 GIIASMAH-TEADTDLVAIDASHLFKSSTTQIAFKHSTFLRNYMYDFIQYFSPHLTR 296
>gi|421080735|ref|ZP_15541653.1| Transcriptional regulator Cbl [Pectobacterium wasabiae CFBP 3304]
gi|401704747|gb|EJS94952.1| Transcriptional regulator Cbl [Pectobacterium wasabiae CFBP 3304]
Length = 317
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP HPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEHHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 KPVITLEMLNAEPLITYRHGITGRSRLDRAFHAAGMSPEITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +++D RDK L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GILADMSYDPVRDKGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|410086180|ref|ZP_11282893.1| transcriptional regulator for cysteine regulon [Morganella morganii
SC01]
gi|421494192|ref|ZP_15941543.1| CYSB [Morganella morganii subsp. morganii KT]
gi|455737514|ref|YP_007503780.1| transcriptional regulator for cysteine regulon [Morganella morganii
subsp. morganii KT]
gi|400191556|gb|EJO24701.1| CYSB [Morganella morganii subsp. morganii KT]
gi|409767324|gb|EKN51402.1| transcriptional regulator for cysteine regulon [Morganella morganii
SC01]
gi|455419077|gb|AGG29407.1| transcriptional regulator for cysteine regulon [Morganella morganii
subsp. morganii KT]
Length = 325
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 187/303 (61%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN++Q + E VR +FN+T AA+ LYTSQP VSK + LE+EL++ +F R + L+
Sbjct: 1 MNINQLKSFVEVVRSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ + R I+ + + +K + NL IATTHTQ RY LPK+I+ F ++P
Sbjct: 61 PIGEEVHRVACDILAQFDKIKSLVSHEDTTTKQNLRIATTHTQIRYKLPKVIERFNARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L QG P Q+ EM++N D AI TE L D L+++PCYQW IVP DHPL
Sbjct: 121 NISLHFHQGAPAQLAEMVKNGDVDFAIATESLHLYDDLLTLPCYQWSRSAIVPHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++E+++YPLITY F+GR KLD+ F LTP +VL ++++IIK YV+ G+
Sbjct: 181 NEQLTIQELAHYPLITYVFGFTGRSKLDQVFYQNHLTPNVVLTAVDTEIIKFYVKRGAGV 240
Query: 241 GIIASIAFDSNRDKN-LRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
G+I+++AFD D + LR I+ +L + + + I + T+L+ Y+Y FI +P L+ +
Sbjct: 241 GVISTVAFDPAEDSDSLRCINIGNLVKPSYTHICISRHTHLKDYMYDFISCYAPHLDLNY 300
Query: 300 INK 302
I++
Sbjct: 301 IHQ 303
>gi|183599257|ref|ZP_02960750.1| hypothetical protein PROSTU_02717 [Providencia stuartii ATCC 25827]
gi|386741506|ref|YP_006214685.1| LysR family transcriptional regulator [Providencia stuartii MRSN
2154]
gi|188021488|gb|EDU59528.1| HTH-type transcriptional regulator CysB [Providencia stuartii ATCC
25827]
gi|384478199|gb|AFH91994.1| LysR family transcriptional regulator [Providencia stuartii MRSN
2154]
Length = 324
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 183/304 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V + N++ A+ L+TSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNHDLNVSATAEGLFTSQPGISKQVRMLEDELGIQIFARSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++R ++ +IE ++ + E + D G L IATTHTQARYALP +IK F ++P
Sbjct: 61 PAGEEVIRISREVLSKIEAIRSVAGEHTYPDKGTLHIATTHTQARYALPPVIKGFIERYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + QG+P QI E + +D AI TE L LI +PCY W ++V HPL
Sbjct: 121 HVSLHMQQGSPTQIAEEVCKGNSDFAIATEALHLYSDLIMLPCYHWNRCVVVQKGHPLAE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++++++++ Y ++TY F+GR +LD F L P I+ ++D+IKTYV L +GI
Sbjct: 181 KKNVTIEDVAQYQIVTYTHGFTGRSELDVAFQKANLEPKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A + D +L I F + +++ K+ ++LRSY+Y FI +P L R +
Sbjct: 241 GIIASMAVNPELDSDLVVIDMRDKFSYSTTKIGFKRTSFLRSYMYDFIWRFAPHLTRDVV 300
Query: 301 NKIL 304
++ +
Sbjct: 301 DRAI 304
>gi|261821079|ref|YP_003259185.1| transcriptional regulator CysB-like protein [Pectobacterium
wasabiae WPP163]
gi|261605092|gb|ACX87578.1| transcriptional regulator, LysR family [Pectobacterium wasabiae
WPP163]
gi|385871277|gb|AFI89797.1| HTH-type transcriptional regulator CysB [Pectobacterium sp.
SCC3193]
Length = 317
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP HPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEHHPLTE 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 NPVITLEMLNAEPLITYRHGITGRSRLDRAFHAAGMSPEITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +++D RDK L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GILADMSYDPVRDKGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|422009674|ref|ZP_16356657.1| cys regulon transcriptional activator [Providencia rettgeri Dmel1]
gi|414093492|gb|EKT55164.1| cys regulon transcriptional activator [Providencia rettgeri Dmel1]
Length = 325
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 182/303 (60%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ Q + E VR +FN+T AA+ LYTSQP VSK + LE+EL++ +F R + L+
Sbjct: 1 MNISQLKSFVEVVRSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ + I+ + + +K I NL IATTHTQ RY LP++I+ F ++P
Sbjct: 61 PIGEKVHHVACDILAQFDKIKSIVSHEDTTIKQNLHIATTHTQIRYKLPQVIERFNARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L QG P QI EM+ N D AI TE + D L+ +PCYQW IIVP DHPL
Sbjct: 121 NISLHFHQGAPAQIAEMVNNGDVDFAIATESMHLYDDLLVMPCYQWSRSIIVPHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+S+++++ YPLITY F+G KLD+ F KLTP +VL ++++IIK YV+ G+
Sbjct: 181 CEQLSIEDLAGYPLITYVFGFTGHSKLDQVFYQHKLTPNVVLTAVDTEIIKYYVKRGAGV 240
Query: 241 GIIASIAFDSNRD-KNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GII+++AFD D + LR I SHL + + V I + +L+ Y+Y FI +P L+ +
Sbjct: 241 GIISTVAFDPEEDSETLRCIDISHLVKPSYTHVCINRHMHLKDYMYDFISNYAPHLDLNY 300
Query: 300 INK 302
I++
Sbjct: 301 IHQ 303
>gi|50120454|ref|YP_049621.1| transcriptional regulator CysB-like protein [Pectobacterium
atrosepticum SCRI1043]
gi|49610980|emb|CAG74425.1| LysR-family transcriptional regulator [Pectobacterium atrosepticum
SCRI1043]
Length = 317
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 191/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +RE+ R N+NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+ +L E I+ + ++++ F+ DTG L IATTHTQARY+LP +IK F +P
Sbjct: 61 EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L QG P +I M+ + +ADI I +E L L + Y+W + +IVP HPL
Sbjct: 121 QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEHHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
I+L+ ++ PLITY +GR +LDR F ++P I L +SD+IKTYVEL +G+
Sbjct: 181 KPLITLEMLNAEPLITYRQGITGRSRLDRAFQAVGMSPDITLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GI+A +++D RDK L ++A HLF + +K+G R+Y + FI+L + +L+
Sbjct: 241 GIVADMSYDPVRDKGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELS 296
>gi|395234311|ref|ZP_10412536.1| transcriptional regulator Cbl [Enterobacter sp. Ag1]
gi|394731085|gb|EJF30906.1| transcriptional regulator Cbl [Enterobacter sp. Ag1]
Length = 314
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 202/303 (66%), Gaps = 2/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLTE A L+TSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTEVANMLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPVVIKAFRALFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ + ADI I +E LS +++ P ++W + ++VP HPL+
Sbjct: 121 EVRLELIQGTPQEIESLLHSGAADIGIASERLSTDPLVVAYPWFRWYHSLLVPQGHPLIH 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ ++L +IS +PLITY +GR ++D F+ + LT +VL +SD++KTYVEL +GI
Sbjct: 181 TSPLTLDDISRWPLITYRQGITGRSRIDEAFARRGLTADVVLSAQDSDVVKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A A S + +L + HLF + I++G R+YV+ FI+L +P+L+ + I
Sbjct: 241 GLVADQA--SGEEGSLVRLDTRHLFDANTVWLGIRRGQLQRNYVWRFIELCNPELSVEEI 298
Query: 301 NKI 303
++
Sbjct: 299 KRL 301
>gi|387888838|ref|YP_006319136.1| HTH-type transcriptional regulator Cbl [Escherichia blattae DSM
4481]
gi|414592904|ref|ZP_11442553.1| cys regulon transcriptional activator Cbl [Escherichia blattae NBRC
105725]
gi|386923671|gb|AFJ46625.1| HTH-type transcriptional regulator Cbl [Escherichia blattae DSM
4481]
gi|403196385|dbj|GAB80205.1| cys regulon transcriptional activator Cbl [Escherichia blattae NBRC
105725]
Length = 316
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/302 (43%), Positives = 195/302 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA R+++NLT+ A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARRDYNLTDVASMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ TG LTIATTHTQARY+LP +IK F +FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADVFTDNATGVLTIATTHTQARYSLPPVIKTFRERFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I ++ N AD+ I TE L+ L++ P + W + ++VP HPL+
Sbjct: 121 EVRLELIQGTPQEIETLLHNGGADVGIATERLNNDPLLVAYPWFHWYHTLLVPAGHPLVN 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++L+ I+ +PLITY +GR ++D F + L P +VL +SD+IKTYVEL +GI
Sbjct: 181 HTPLTLEHIAQWPLITYRQGITGRGRIDDAFQRRGLIPDVVLSAQDSDVIKTYVELGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A A + L + HLF + IK+G R+YV+ FI+L + L+ + I
Sbjct: 241 GLVAGQAGGEAGNPALVQLDTRHLFEANTVWLGIKRGQLQRNYVWHFIELCNEALSFEEI 300
Query: 301 NK 302
+
Sbjct: 301 KR 302
>gi|152970978|ref|YP_001336087.1| transcriptional regulator Cbl [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955827|gb|ABR77857.1| transcriptional regulator cys regulon; accessory regulatory circuit
affecting cysM [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 316
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 61 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP +HPL
Sbjct: 121 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKEHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 181 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 241 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 296
>gi|330000829|ref|ZP_08303843.1| cys regulon transcriptional regulator Cbl [Klebsiella sp. MS 92-3]
gi|328537851|gb|EGF64041.1| cys regulon transcriptional regulator Cbl [Klebsiella sp. MS 92-3]
Length = 338
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 23 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 82
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 83 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 142
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP DHPL
Sbjct: 143 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTQ 202
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 203 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 262
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 263 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 318
>gi|308050228|ref|YP_003913794.1| LysR family transcriptional regulator [Ferrimonas balearica DSM
9799]
gi|307632418|gb|ADN76720.1| transcriptional regulator, LysR family [Ferrimonas balearica DSM
9799]
Length = 324
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 189/305 (61%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E V N N++ A++LYTSQPG+SK + LE+EL I IF R GK + +T
Sbjct: 1 MKLQQLRYIVEVVNNNLNVSATAESLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
GQ ++ I+ ++EG+K+ +E++ D G+L IATTHTQARYALP +I+ F ++P
Sbjct: 61 PAGQQVIDIAGDILGKVEGIKRAAQEYTQPDRGDLNIATTHTQARYALPSVIQGFIHRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V L + Q P QI EM AD AI TE + L+ +PCY W I+ P DHPL
Sbjct: 121 NVNLHMHQATPDQICEMAVRGDADFAIATEGMHLFHDLVMLPCYHWNRSIVFPKDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ + L+E+ YPL+TY F+ L++ FS + P +V ++D++KTYV + +G+
Sbjct: 181 SSKVGLEELVKYPLVTYVFGFNRSSALEKAFSTVEGDPRVVFSATSADVLKTYVRMGLGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A++A + ++L + A+HLF +++ ++G++LR+Y+Y F++ +P L R +
Sbjct: 241 GVMATMALEHEDTEDLVVVDAAHLFEPNTTKIGFRKGSFLRTYMYDFMERFAPHLTRPRV 300
Query: 301 NKILN 305
+ L+
Sbjct: 301 EEALS 305
>gi|268591878|ref|ZP_06126099.1| HTH-type transcriptional regulator CysB [Providencia rettgeri DSM
1131]
gi|291312852|gb|EFE53305.1| HTH-type transcriptional regulator CysB [Providencia rettgeri DSM
1131]
Length = 325
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 182/303 (60%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ Q + E VR +FN+T AA+ LYTSQP VSK + LE+EL++ +F R + L+
Sbjct: 1 MNISQLKSFVEVVRSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ + I+ + + +K I + NL IATTHTQ RY LP++I+ F ++P
Sbjct: 61 PIGEKVHHVACDILAQFDKIKSIVSHEDSTIKQNLHIATTHTQIRYKLPQVIERFNTRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L QG P QI EM+ N D AI TE + D L+ +PCYQW IIVP DHPL
Sbjct: 121 NISLHFHQGAPAQIAEMVNNGDVDFAIATESMHLYDDLLVMPCYQWSRSIIVPHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+ +++++ YPLITY F+G KLD+ F KLTP +VL ++++IIK YV+ G+
Sbjct: 181 CEQLKIEDLAGYPLITYVFGFTGHSKLDQVFYQHKLTPNVVLTAVDTEIIKYYVKRGAGV 240
Query: 241 GIIASIAFDSNRD-KNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GII+++AFD D + LR I SHL + + V I + +L+ Y+Y FI +P L+ +
Sbjct: 241 GIISTVAFDPEEDSEALRCIDISHLVKPSYTHVCINRHMHLKDYMYDFISHYAPHLDLNY 300
Query: 300 INK 302
I++
Sbjct: 301 IHQ 303
>gi|421498642|ref|ZP_15945735.1| HTH-type transcriptional regulator CysB [Aeromonas media WS]
gi|407182344|gb|EKE56308.1| HTH-type transcriptional regulator CysB [Aeromonas media WS]
Length = 303
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 187/301 (62%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNL + + E V+ NFN++ A+ LYTSQP +SK + LEEEL + +F R GK + GLT
Sbjct: 1 MNLARLKNFTEIVKNNFNISATAEKLYTSQPTLSKQMKMLEEELGLALFTRKGKNLAGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ ++ + ++ ++E + ++ +G L IATTHT ARY L +I F+ ++P
Sbjct: 61 PMGEQVMELAKGVVAQVEQIGQLSLGDQLATSGVLRIATTHTMARYKLLAVITAFSRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V + L QG P Q+ +M+ N ++AI TE + ++L ++PCY+W ++VP HPLL
Sbjct: 121 AVSIQLHQGAPAQLAQMVENGDVEMAIATESMHLFEELATVPCYRWGRGVVVPHGHPLLD 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++ +++ YPLITY F+G K+D+ F L+P IVL +SDIIK YV L MG+
Sbjct: 181 CQPLAMADLARYPLITYVFGFTGNSKMDKAFGRHGLSPRIVLTATDSDIIKHYVHLGMGV 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G+IA+ AFD ++L ++ HL ++++ V +++ +LR Y+Y FI L +P ++R+ +
Sbjct: 241 GVIATSAFDEADRESLVCLNIDHLIASSVAHVCLRRHAHLRDYMYDFIHLYAPHVSRETV 300
Query: 301 N 301
Sbjct: 301 Q 301
>gi|284007504|emb|CBA72991.1| cys regulon transcriptional activator (LysR-family transcriptional
regulator) [Arsenophonus nasoniae]
Length = 324
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 184/305 (60%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R++ E N N++ A+ LYTSQPG+SK + LE+EL + IF R GK + +T
Sbjct: 1 MKLQQLRYIVEIENHNLNVSSTAEGLYTSQPGISKQVRMLEDELGVQIFGRSGKHLTHVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +++ +M ++ ++ + E + D G L IATTHTQARYALP +IK+F +P
Sbjct: 61 PAGKEVIKIAREVMTKMNAIRAVVGEHTYPDRGILAIATTHTQARYALPPVIKQFIEHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V L + QG+P QI E + +D AI TE L L+ +PCY W ++V DHPL+
Sbjct: 121 QVSLHMSQGSPIQIAEDVSKGNSDFAIATEALHLYKDLVMLPCYHWNRSVVVKADHPLVS 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+I++ E++ YP++TY F+GR +LD F L I+ ++D+IKTYV L +GI
Sbjct: 181 KKNITINELAQYPIVTYTHGFTGRSELDEAFLKAGLQAKIIFTATDADVIKTYVRLGLGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
GIIAS+A D + D++L I F + +++ + ++LRSY+Y FI +P L +
Sbjct: 241 GIIASMAVDPSLDQDLVIIDMRDKFSYSTTKIGFHRNSFLRSYMYDFIWRFAPHLTPDVV 300
Query: 301 NKILN 305
+K ++
Sbjct: 301 DKAIS 305
>gi|419763822|ref|ZP_14290062.1| cys regulon transcriptional regulator Cbl [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|397742405|gb|EJK89623.1| cys regulon transcriptional regulator Cbl [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 338
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 192/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 23 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 82
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 83 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 142
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++VP +HPL
Sbjct: 143 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKEHPLTQ 202
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 203 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 262
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 263 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 318
>gi|422013265|ref|ZP_16359893.1| cys regulon transcriptional activator [Providencia burhodogranariea
DSM 19968]
gi|414103473|gb|EKT65048.1| cys regulon transcriptional activator [Providencia burhodogranariea
DSM 19968]
Length = 326
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 186/303 (61%), Gaps = 1/303 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN+ Q + E V+ +FN+T AA+ LYTSQP VSK + LE+EL++ +F R + L+
Sbjct: 1 MNISQLKSFVEVVKSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ + I+ + + +K + + +L IATTHTQ RY LPK+I+ F ++P
Sbjct: 61 PIGEKVHHVACDILAQFDKIKSLVAQEDTNTKQSLHIATTHTQIRYKLPKVIERFKARYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L QG P Q+ EM+ N D AI TE L D L+++PCYQW +IVP DHPL
Sbjct: 121 NISLHFHQGAPAQLAEMVNNGDVDFAIATESLHLYDDLLTMPCYQWSRSVIVPHDHPLAQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
+++KE++NYPLITY F+G KLD+ F L P +VL ++++IIK YV+ +G+
Sbjct: 181 DEQLTIKELANYPLITYVFGFTGSSKLDQVFYQNNLIPNVVLTAVDTEIIKFYVKRGVGV 240
Query: 241 GIIASIAFDSNRD-KNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
GII+S+AFD D + LR I+ S+L + + + I + T+L+ Y+Y FI +P L+ +
Sbjct: 241 GIISSVAFDVEEDSETLRCINISNLVKPSYTHICISRHTHLKDYMYDFISCYAPHLDLNY 300
Query: 300 INK 302
I++
Sbjct: 301 IHQ 303
>gi|425283603|ref|ZP_18674657.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli TW00353]
gi|408202526|gb|EKI27620.1| DNA-binding transcriptional activator of cysteine biosynthesis
[Escherichia coli TW00353]
Length = 292
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 184/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I ++ N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLHNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VPLDHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIGI+A + +KNL + HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGIVAEQSSGEQEEKNLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|349575891|ref|ZP_08887795.1| Cys regulon transcriptional activator CysB [Neisseria shayeganii
871]
gi|348012553|gb|EGY51496.1| Cys regulon transcriptional activator CysB [Neisseria shayeganii
871]
Length = 315
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 190/306 (62%), Gaps = 3/306 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R+N N++EAA+ L+TSQPG+SK I LE+EL + +F+RHGKRI LT
Sbjct: 1 MKLQQLRYFLEVSRRNLNISEAAEVLFTSQPGISKQIKLLEDELGVSLFVRHGKRIVSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
PGQA++ E I ++++ ++ +G EF+ D+G LT+ATTHTQARY LP+++ F ++P
Sbjct: 61 PPGQAVVEIAERIFRDVQNIRNVGTEFAEQDSGRLTVATTHTQARYVLPQVVTAFLRRYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLL- 179
KVKLSL+ P I +M+ + + D+A+ +E+ L I + W ++VP H
Sbjct: 121 KVKLSLIPAAPMAIDQMVADGRVDLAVNSEVALQDANLRRITAHPWHRCVLVPRGHAWAE 180
Query: 180 LLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLT-PYIVLETINSDIIKTYVELRM 238
+ + ++++ PL+TY + L + F+ L P L + + DIIKTYV +
Sbjct: 181 MARPLVREDLAGVPLVTY-ADVADDSALQQVFAGTGLPWPETALASADPDIIKTYVRAGI 239
Query: 239 GIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRK 298
G+G++A +A+D+ D +L + A H+F + ++++Q TYLR Y + F++L P+L+R+
Sbjct: 240 GVGLLADVAYDAEADADLVCLPAGHMFYPAFTHIVVRQDTYLRGYAFEFMQLYLPQLSRE 299
Query: 299 FINKIL 304
I + L
Sbjct: 300 QIEQRL 305
>gi|365850156|ref|ZP_09390623.1| cys regulon transcriptional regulator Cbl [Yokenella regensburgei
ATCC 43003]
gi|364567796|gb|EHM45447.1| cys regulon transcriptional regulator Cbl [Yokenella regensburgei
ATCC 43003]
Length = 324
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 192/302 (63%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N Q + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 9 VNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 68
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F +
Sbjct: 69 EPGKALLVIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELYS 128
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L+QG P++I ++RN ADI I +E LS L + P ++W + ++VP HPL
Sbjct: 129 DVRLELIQGTPQEIETLLRNGGADIGIASERLSNDPLLAAFPWFRWSHSLLVPEHHPLTQ 188
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
N ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IKTYVEL +GI
Sbjct: 189 ANPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLVADIVLSAQDSDVIKTYVELGLGI 248
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFI 300
G++A + D + HLF + +K+G R+YV+ FI+L + L+ + I
Sbjct: 249 GLVAEQSADEQETGTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLEEI 308
Query: 301 NK 302
+
Sbjct: 309 KR 310
>gi|125543816|gb|EAY89955.1| hypothetical protein OsI_11515 [Oryza sativa Indica Group]
Length = 286
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 169/262 (64%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L +AT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D LI
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGTADFAIATEALHLYDDLI 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W ++V DHPL +SIS++E++ YP++TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAVVVKPDHPLAGKSSISIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D +D +L ++ A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVQDPDLVTVDARDIFTYSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|219872133|ref|YP_002476508.1| transcriptional regulator CysB [Haemophilus parasuis SH0165]
gi|219692337|gb|ACL33560.1| HTH-type transcriptional regulator CysB [Haemophilus parasuis
SH0165]
Length = 311
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 184/285 (64%), Gaps = 5/285 (1%)
Query: 17 FNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQE 76
N+TEAA+ LYTSQPG+SK + LE+EL I IF R GK I+ LT G+ I+ ++ +
Sbjct: 1 MNITEAAEVLYTSQPGISKQVRLLEDELGIHIFERCGKHIKALTPAGERIITIAREMLAQ 60
Query: 77 IEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITE 136
+G+K I +E ++ G L IATT+TQARY LPKII++F ++P V L L QG+P QI +
Sbjct: 61 AQGIKSIAEEQTSPHKGILRIATTNTQARYVLPKIIEKFKNKYPSVSLHLHQGSPTQIYD 120
Query: 137 MIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLL----NSISLKEISNY 192
+ + D+AI+TE + +I +PCY W +IV DHPL L N ++++E+ Y
Sbjct: 121 ALMAGEVDLAIITEAQYLFENVILLPCYMWNRSVIVKPDHPLAKLNKGNNKLTIEELGQY 180
Query: 193 PLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNR 252
LITY F+GR LD+ F+ + P IV ++D+IKTYV +GIGI+A++A+ +
Sbjct: 181 DLITYTFGFTGRSDLDKAFNKHGILPRIVFTATDADVIKTYVRSGLGIGIMATMAY-TKE 239
Query: 253 DKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
DK+L +I ASHLF +++++ K+G +LR+Y+Y FI S L +
Sbjct: 240 DKDLVAIDASHLFQASMTQIAFKRGVFLRNYMYDFINYFSAHLTK 284
>gi|161613800|ref|YP_001587765.1| hypothetical protein SPAB_01534 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|417362980|ref|ZP_12136492.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|161363164|gb|ABX66932.1| hypothetical protein SPAB_01534 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|353600904|gb|EHC56656.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 286
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 166/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D L+
Sbjct: 62 THTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +SI+++ ++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRSIVVTPDHPLAATSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L I A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|378955225|ref|YP_005212712.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|386591553|ref|YP_006087953.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|417510476|ref|ZP_12175362.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|436708531|ref|ZP_20518645.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|353646165|gb|EHC89666.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|357205836|gb|AET53882.1| cys regulon transcriptional activator [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|383798597|gb|AFH45679.1| Cys regulon transcriptional activator CysB [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|434991925|gb|ELL83403.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
Length = 286
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 166/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D L+
Sbjct: 62 THTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +S++++ ++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRSIVVTPDHPLAATSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L I A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|289825198|ref|ZP_06544506.1| transcriptional regulator CysB [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|378959789|ref|YP_005217275.1| HTH-type transcriptional regulator cysB [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|374353661|gb|AEZ45422.1| HTH-type transcriptional regulator cysB [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 286
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 166/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D L+
Sbjct: 62 THTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +SI+++ ++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRSIVVTPDHPLAATSSITIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L I A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPLTDPDLVRIDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|417383180|ref|ZP_12148933.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353612609|gb|EHC64946.1| transcriptional regulator LysR [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
Length = 286
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 166/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D L+
Sbjct: 62 THTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +S++++ ++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRSIVVTPDHPLAATSSVTIEALAKYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L I A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|423140189|ref|ZP_17127827.1| cys regulon transcriptional activator CysB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379052743|gb|EHY70634.1| cys regulon transcriptional activator CysB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 286
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 167/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D L+
Sbjct: 62 THTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +S++++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRSIVVTPDHPLAANSSVTIEELAQYPLVTYTFGFTGRSELDIAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPLADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|262043473|ref|ZP_06016596.1| Cys regulon transcriptional regulator Cbl [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259039215|gb|EEW40363.1| Cys regulon transcriptional regulator Cbl [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 338
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 190/296 (64%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+N + +REA RQ++NLTE A LYTSQ GVS+ I ELEEEL I+IFIR GKR+ G+T
Sbjct: 23 VNFQLLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT 82
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP +IK F F
Sbjct: 83 EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS 142
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V++ L+QG P++I ++ N ADI I +E LS L + P ++W + ++V DHPL
Sbjct: 143 DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVQKDHPLTQ 202
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
++ ++L+ I+ +PLITY +GR ++D F+ + L P IVL +SD+IKTYVEL +G+
Sbjct: 203 VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV 262
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
G++A + D+ + HLF + +K+G R+YV+ FI+L + L+
Sbjct: 263 GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLS 318
>gi|445034759|ref|ZP_21350312.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1762]
gi|444646376|gb|ELW19388.1| HTH-type transcriptional regulator cbl [Escherichia coli 99.1762]
Length = 292
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 183/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I ++ N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLHNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VP DHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L I+L +SD+IKTYV L +GIG++A + +KNL + HLF
Sbjct: 182 RIDDAFARKGLLADIILSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEKNLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|418997198|ref|ZP_13544795.1| cbl transcriptional activator [Escherichia coli DEC1A]
gi|377844737|gb|EHU09771.1| cbl transcriptional activator [Escherichia coli DEC1A]
Length = 292
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 185/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VPLDHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|415844783|ref|ZP_11524525.1| HTH-type transcriptional regulator cbl [Shigella sonnei 53G]
gi|323168895|gb|EFZ54575.1| HTH-type transcriptional regulator cbl [Shigella sonnei 53G]
Length = 292
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 185/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VPLDHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|425422841|ref|ZP_18804009.1| cys regulon transcriptional regulator Cbl [Escherichia coli 0.1288]
gi|408344158|gb|EKJ58546.1| cys regulon transcriptional regulator Cbl [Escherichia coli 0.1288]
Length = 292
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 185/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VPLDHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRRGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|148653571|ref|YP_001280664.1| transcriptional regulator CysB-like protein [Psychrobacter sp.
PRwf-1]
gi|148572655|gb|ABQ94714.1| transcriptional regulator, LysR family [Psychrobacter sp. PRwf-1]
Length = 309
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 179/296 (60%), Gaps = 1/296 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V V +NL++AA+ L+TSQ +SK I LE +L ++F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWHTVINGYNLSQAAQVLHTSQSSLSKHISALENQLKAEVFVRQGKRLTGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+A+L IE I EI ++ I +++ TG LT+ATTHTQARY LP IIK+F QFP
Sbjct: 74 PVGEALLPHIEAIFTEIRTIENISLDYNNPQTGTLTLATTHTQARYVLPDIIKQFKQQFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+L L Q +P+ I M+ QADI I TE L + L Y W + +IVP DH L
Sbjct: 134 KVQLVLQQADPQTIANMVIRGQADIGIATEALLQNSYLRCYRYYDWSHRVIVPKDHELAE 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L+SI L +++YPL+TY F+GR +D+ F L P IVL +++D+I TYV +G+
Sbjct: 194 LDSIDLPTLASYPLVTYHGGFTGRGAIDKTFHDAGLEPEIVLAALDADVISTYVGAGLGV 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GIIA +AF+ +NL +I H FG S + ++ +R + +FI+L + +
Sbjct: 254 GIIAEMAFEPGHYQNLTAIPVDH-FGRFTSWIAVRDDAEIRHFGQAFIQLCQQQFS 308
>gi|71065793|ref|YP_264520.1| transcriptional regulator CysB-like protein [Psychrobacter arcticus
273-4]
gi|71038778|gb|AAZ19086.1| transcriptional regulator, LysR family [Psychrobacter arcticus
273-4]
Length = 309
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 181/296 (61%), Gaps = 1/296 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V V +NL++AA L+TSQ +SK I LE +L ++F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWHTVINGYNLSQAATVLHTSQSSLSKHIAALENQLKTEVFVRQGKRLTGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G A++ IE I EI ++ + +F+ + G LTIATTHTQARY LP+++KEF +FP
Sbjct: 74 TMGTALMPHIESIFAEIRTIENLSLDFNNPNVGTLTIATTHTQARYVLPEVVKEFKERFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P+ I +M+ QADI I TE L ++ L Y W + +IVP DH L
Sbjct: 134 KVNLILQQADPETIAQMVIRGQADIGIATESLLHNNYLRCYRYYDWTHRVIVPSDHELAG 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L SI L +++YP++TY F+GR +D+ FS L P IVL +++D+I TYV L +GI
Sbjct: 194 LESIDLPTLASYPIVTYHGGFTGRGAIDKTFSDAGLEPDIVLAALDADVISTYVGLGLGI 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GIIA +AF+ + +NL +I H FG S + ++ +R Y +F++L + N
Sbjct: 254 GIIAEMAFEPSHYQNLTAIPVDH-FGRFTSWMAVRDDAEIRQYGRAFMELCQKQFN 308
>gi|415812514|ref|ZP_11504651.1| HTH-type transcriptional regulator cysB [Escherichia coli LT-68]
gi|417682284|ref|ZP_12331641.1| HTH-type transcriptional regulator cysB [Shigella boydii 3594-74]
gi|418043460|ref|ZP_12681621.1| transcriptional regulator CysB [Escherichia coli W26]
gi|418958389|ref|ZP_13510306.1| transcriptional regulator CysB [Escherichia coli J53]
gi|420335624|ref|ZP_14837231.1| HTH-type transcriptional regulator CysB [Shigella flexneri K-315]
gi|420346519|ref|ZP_14847935.1| HTH-type transcriptional regulator CysB [Shigella boydii 965-58]
gi|420352217|ref|ZP_14853369.1| HTH-type transcriptional regulator CysB [Shigella boydii 4444-74]
gi|425192713|ref|ZP_18589630.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE1487]
gi|425416770|ref|ZP_18798193.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK523]
gi|323172370|gb|EFZ58007.1| HTH-type transcriptional regulator cysB [Escherichia coli LT-68]
gi|332094766|gb|EGI99810.1| HTH-type transcriptional regulator cysB [Shigella boydii 3594-74]
gi|383473616|gb|EID65634.1| transcriptional regulator CysB [Escherichia coli W26]
gi|384378909|gb|EIE36783.1| transcriptional regulator CysB [Escherichia coli J53]
gi|391265257|gb|EIQ24230.1| HTH-type transcriptional regulator CysB [Shigella flexneri K-315]
gi|391273236|gb|EIQ32062.1| HTH-type transcriptional regulator CysB [Shigella boydii 965-58]
gi|391283996|gb|EIQ42601.1| HTH-type transcriptional regulator CysB [Shigella boydii 4444-74]
gi|408113854|gb|EKH45434.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli NE1487]
gi|408343063|gb|EKJ57471.1| positive transcriptional regulator for cysteine regulon
[Escherichia coli FRIK523]
Length = 286
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 166/262 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI + + AD AI TE L + L+
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +I+++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|333369550|ref|ZP_08461661.1| Cys regulon transcriptional regulator Cbl [Psychrobacter sp.
1501(2011)]
gi|332970822|gb|EGK09801.1| Cys regulon transcriptional regulator Cbl [Psychrobacter sp.
1501(2011)]
Length = 309
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 178/296 (60%), Gaps = 1/296 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V V +NL++AA+ L+TSQ +SK I LE +L ++F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWHTVINGYNLSQAAQVLHTSQSSLSKHISALENQLKAEVFVRQGKRLTGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+A+L IE I EI ++ I +++ TG LT+ATTHTQARY LP+IIK+F QFP
Sbjct: 74 PVGEALLPHIESIFTEIRTIENISLDYNNPQTGTLTLATTHTQARYVLPEIIKKFKEQFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV+L L Q +P+ I M+ QADI I TE L + L Y W + +IVP DH L
Sbjct: 134 KVQLVLQQADPQTIANMVIRGQADIGIATEALLQNSYLRCYRYYDWSHRVIVPKDHELAG 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L SI L +++YPL+TY F+GR +D+ F L P IVL +++D+I TYV +G+
Sbjct: 194 LESIDLPTLASYPLVTYHGGFTGRGAIDQTFHAAGLEPEIVLAALDADVISTYVGAGLGV 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
GIIA +AF+ +NL +I H FG S + ++ +R + +FIKL +
Sbjct: 254 GIIAEMAFEPGHYQNLTAIPVDH-FGRFTSWIAVRDDAEIRHFGKAFIKLCQQQFG 308
>gi|443716276|gb|ELU07883.1| hypothetical protein CAPTEDRAFT_122106, partial [Capitella teleta]
Length = 278
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 170/258 (65%)
Query: 47 DIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARY 106
++F R GK + +T G+ I+ + I++++E +K++ +EFS G+L+IATTHTQARY
Sbjct: 1 EVFARSGKHLTRITPAGEKIIDTAGEILRKVESIKQVAQEFSDERKGSLSIATTHTQARY 60
Query: 107 ALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQW 166
ALP II++F Q+P V L + QG P QI EM + D AI TE L + L+ +PCY+W
Sbjct: 61 ALPGIIQQFIGQYPDVALHMHQGTPIQIAEMAADGSVDFAIATEALELFNDLVMMPCYRW 120
Query: 167 EYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETIN 226
++VP DHPL ++ +SLK+I+ + L+TY F+GR KLD F + L+P +V +
Sbjct: 121 NRCVLVPKDHPLTQVSELSLKDIARFALVTYVFGFTGRSKLDEAFMNEGLSPRVVFTATD 180
Query: 227 SDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYS 286
+D+IKTYV L +G+GIIA +A+D D +L ++A HLF +I+++ ++GT+LR ++Y
Sbjct: 181 ADVIKTYVRLGLGVGIIAKMAYDPELDSDLVPLNADHLFEPSITKIGFRRGTFLRGFMYD 240
Query: 287 FIKLLSPKLNRKFINKIL 304
FI+ +P L + + + +
Sbjct: 241 FIEEFAPHLTKDVVQEAI 258
>gi|238763113|ref|ZP_04624079.1| HTH-type transcriptional regulator cysB [Yersinia kristensenii ATCC
33638]
gi|238698612|gb|EEP91363.1| HTH-type transcriptional regulator cysB [Yersinia kristensenii ATCC
33638]
Length = 286
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 167/263 (63%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T G I+R ++ +++ +K + E + D G+L +AT
Sbjct: 2 LEDELGIQIFARSGKHLTQVTPAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI E + AD AI TE L D LI
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGSADFAIATEALHLYDDLI 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W ++V DHPL + +S++E++ YP++TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAVVVKPDHPLAGKSHVSIEELAAYPIVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D +D +L ++ A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPIQDPDLVTVDARDIFTYSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFINK 302
LRSY+Y FI +P L R ++K
Sbjct: 242 LRSYMYDFILRFAPHLTRDVVDK 264
>gi|417727937|ref|ZP_12376663.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-671]
gi|417827434|ref|ZP_12474003.1| cysB [Shigella flexneri J1713]
gi|332760369|gb|EGJ90659.1| HTH-type transcriptional regulator cysB [Shigella flexneri K-671]
gi|335576248|gb|EGM62506.1| cysB [Shigella flexneri J1713]
Length = 286
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 165/262 (62%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG P QI + + AD AI TE L + L+
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGPPTQIADAVSKGNADFAIATEALHLYEDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +I+++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|386704222|ref|YP_006168069.1| Transcriptional regulator Cbl [Escherichia coli P12b]
gi|425120092|ref|ZP_18521796.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0569]
gi|383102390|gb|AFG39899.1| Transcriptional regulator Cbl [Escherichia coli P12b]
gi|408570475|gb|EKK46450.1| HTH-type transcriptional regulator cbl [Escherichia coli 8.0569]
Length = 292
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 185/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VP DHPL ++ ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|420380046|ref|ZP_14879517.1| HTH-type transcriptional regulator CysB [Shigella dysenteriae
225-75]
gi|391303101|gb|EIQ60943.1| HTH-type transcriptional regulator CysB [Shigella dysenteriae
225-75]
Length = 286
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 165/262 (62%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI + + AD AI TE L + L+
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +I+++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
RSY+Y FI+ +P L R ++
Sbjct: 242 FRSYMYDFIQRFAPHLTRDVVD 263
>gi|432462246|ref|ZP_19704384.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE204]
gi|433068273|ref|ZP_20255073.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE128]
gi|430987084|gb|ELD03632.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE204]
gi|431585171|gb|ELI57124.1| HTH-type transcriptional regulator cbl [Escherichia coli KTE128]
Length = 292
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 184/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VP DHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|93005983|ref|YP_580420.1| transcriptional regulator CysB-like protein [Psychrobacter
cryohalolentis K5]
gi|92393661|gb|ABE74936.1| transcriptional regulator, LysR family [Psychrobacter
cryohalolentis K5]
Length = 309
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 182/297 (61%), Gaps = 1/297 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V V +NL++AA L+TSQ +SK I LE +L ++F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWHTVINGYNLSQAATVLHTSQSSLSKHIAALENQLKTEVFVRQGKRLTGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G A++ IE I EI ++ + +F+ + G LTIATTHTQARY LP+++KEF +FP
Sbjct: 74 TMGTALMPHIESIFTEIRTIENLSLDFNNPNVGTLTIATTHTQARYVLPEVVKEFKERFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P+ I +M+ QADI I TE L ++ L Y W + +IVP DH L
Sbjct: 134 KVNLILQQADPETIAQMVIRGQADIGIATESLLHNNYLRCYRYYDWTHRVIVPSDHELAG 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
L SI L +++YP++TY F+GR +D+ FS L P IVL +++D+I TYV L +GI
Sbjct: 194 LESIDLPTLASYPIVTYHGGFTGRGAIDKTFSDAGLEPDIVLAALDADVISTYVGLGLGI 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GIIA +AF+ + +NL +I H FG S + ++ +R Y +F++L + ++
Sbjct: 254 GIIAEMAFEPSHYQNLTAIPVDH-FGRFTSWMAVRDDAEIRQYGRAFMELCQKQFSQ 309
>gi|420363550|ref|ZP_14864441.1| cysB [Shigella sonnei 4822-66]
gi|391294463|gb|EIQ52679.1| cysB [Shigella sonnei 4822-66]
Length = 286
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 165/262 (62%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQARYALP +IK F ++P+V L + QG+P QI + + AD I TE L + L+
Sbjct: 62 THTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFTIATEALHLYEDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +I+++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|420325044|ref|ZP_14826816.1| HTH-type transcriptional regulator CysB [Shigella flexneri CCH060]
gi|391254084|gb|EIQ13247.1| HTH-type transcriptional regulator CysB [Shigella flexneri CCH060]
Length = 286
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 165/262 (62%)
Query: 40 LEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIAT 99
LE+EL I IF R GK + +T GQ I+R ++ +++ +K + E + D G+L IAT
Sbjct: 2 LEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIAT 61
Query: 100 THTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLI 159
THTQ RYALP +IK F ++P+V L + QG+P QI + + AD AI TE L + L+
Sbjct: 62 THTQTRYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLV 121
Query: 160 SIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPY 219
+PCY W I+V DHPL +I+++E++ YPL+TY F+GR +LD F+ LTP
Sbjct: 122 MLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR 181
Query: 220 IVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTY 279
IV ++D+IKTYV L +G+G+IAS+A D D +L + A +F + +++ ++ T+
Sbjct: 182 IVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTF 241
Query: 280 LRSYVYSFIKLLSPKLNRKFIN 301
LRSY+Y FI+ +P L R ++
Sbjct: 242 LRSYMYDFIQRFAPHLTRDVVD 263
>gi|417728840|ref|ZP_12377546.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-671]
gi|417743831|ref|ZP_12392359.1| cbl transcriptional activator [Shigella flexneri 2930-71]
gi|332756941|gb|EGJ87285.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-671]
gi|332766513|gb|EGJ96721.1| cbl transcriptional activator [Shigella flexneri 2930-71]
Length = 292
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 183/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+E I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDEFGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG+P++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGSPQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P + W + ++VPLDHPL + ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFCWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
+ D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL + HLF
Sbjct: 182 RTDDAFTRKGLPADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|53728886|ref|ZP_00134714.2| COG0583: Transcriptional regulator [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 315
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 185/288 (64%), Gaps = 5/288 (1%)
Query: 19 LTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIE 78
TEAA+ LYTSQPG+SK + LE EL I+IF R+GK I+GLT G+ I+ ++ + +
Sbjct: 7 FTEAAETLYTSQPGISKQVRLLESELGINIFERNGKHIKGLTPAGEKIVAIARELLVKAQ 66
Query: 79 GLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMI 138
+K + +E + + G L IAT +TQARY LP II++F ++P+V L L QG+P QI + +
Sbjct: 67 SIKSVAEEQTRPNRGVLRIATPNTQARYVLPPIIEKFKAKYPEVSLQLHQGSPSQIYDAL 126
Query: 139 RNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLL----NSISLKEISNYPL 194
+ D+AI TE + I +PCY W +IV DHPL+ +++++E+ Y L
Sbjct: 127 MAGEVDLAITTEAQHLFEDAILLPCYLWNRSVIVKPDHPLVKFVNQSENLTVEELGKYDL 186
Query: 195 ITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDK 254
ITY F+G+ LD F+ + + P+IV ++D+IKTYV L +G+GI+AS+A + D
Sbjct: 187 ITYTFGFTGQSDLDHAFNKEGILPHIVFTATDADVIKTYVRLGLGVGIMASMA-HTPADS 245
Query: 255 NLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+L +I ASHLF ++++++ K+GT+LR+Y+Y FI SP L + + K
Sbjct: 246 DLVAIDASHLFQSSMTQIAFKRGTFLRNYMYDFINYFSPHLTKMQVEK 293
>gi|350560522|ref|ZP_08929362.1| transcriptional regulator, LysR family [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782790|gb|EGZ37073.1| transcriptional regulator, LysR family [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 314
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 171/297 (57%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R + F+++ AA+ L+ QP VS+ + LE L +F+RHGKR+ GLT
Sbjct: 1 MELRQLRSLVTLADSGFSVSRAAQQLHLVQPAVSQHLRLLEAALGTPLFLRHGKRLVGLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+ GQ +LR ++ E+ + +G++ G L I TTHTQARY LP ++ F +P
Sbjct: 61 EAGQQVLRHARSVLAEVGNIVAVGRDHVEEARGVLRIGTTHTQARYVLPPVLIAFKRAYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V++ + QG P Q+ EM D+ D+A+ TE + D LI++P Y+W +I HPLL
Sbjct: 121 EVEVQIHQGTPAQLVEMALADRVDLAVCTEAVGEHDALITLPSYRWNRCLITTPGHPLLQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
ISL + YP+ITY F+GR L + F+ L P +VL ++D+IKTYV MGI
Sbjct: 181 RRPISLGALCEYPMITYVFGFTGRTSLSQTFAKVGLHPRVVLSAADADVIKTYVRSGMGI 240
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GIIA +AF + D++L SHLF ++RV +G Y+R + FI L + +R
Sbjct: 241 GIIADLAFHTEHDRDLERRDLSHLFPWEVTRVAYPRGKYVRRFQQRFIDLFQQQADR 297
>gi|153845757|ref|ZP_01993799.1| HTH-type transcriptional regulator CysB, partial [Vibrio
parahaemolyticus AQ3810]
gi|149745059|gb|EDM56335.1| HTH-type transcriptional regulator CysB [Vibrio parahaemolyticus
AQ3810]
Length = 249
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 159/242 (65%)
Query: 28 TSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGKEF 87
TSQPG+SK + LE+EL I IF R GK + +T G+ I+R + I+ +E +K + E
Sbjct: 1 TSQPGISKQVRLLEDELGIQIFERSGKHLTQVTPAGEEIVRISQEILARVESIKAVAGEH 60
Query: 88 SAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADIAI 147
+ + G L I+TTHTQARYALP +IK FT ++PKV L + QG P Q++E I A+ AI
Sbjct: 61 THPEMGTLNISTTHTQARYALPDVIKGFTARYPKVSLHMHQGTPSQMSEAIAKGTANFAI 120
Query: 148 VTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRIKL 207
TE L I +PCY W I+VP DHPL + +++ +++ YPL+TY F+GR +L
Sbjct: 121 ATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAKKDLVTIHDLAAYPLVTYVFGFTGRSEL 180
Query: 208 DREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLFGT 267
D F+ + LTP +V ++D+IKTYV + +G+G+IAS+A D +D++L +I ASHLFG
Sbjct: 181 DTAFNREGLTPRVVFTATDADVIKTYVRMGIGVGVIASMAVDEEQDRDLVAIDASHLFGA 240
Query: 268 TI 269
+I
Sbjct: 241 SI 242
>gi|415918457|ref|ZP_11554212.1| LysR family transcriptional regulator, partial [Herbaspirillum
frisingense GSF30]
gi|407761231|gb|EKF70339.1| LysR family transcriptional regulator, partial [Herbaspirillum
frisingense GSF30]
Length = 246
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/241 (43%), Positives = 161/241 (66%)
Query: 66 ILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLS 125
IL +E ++ E E L++ KE++ +G L+IATTHTQARY LP+I++ F FP+V+++
Sbjct: 1 ILGIVERLLLEAENLRRASKEYAGEQSGTLSIATTHTQARYVLPRIVQAFRDAFPQVRIA 60
Query: 126 LLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSIS 185
L Q P+ I E + + +ADI I TE LS +L+S PCY W +VI+VP HPLL L ++
Sbjct: 61 LQQSAPEHIAEWVISGKADIGIATEGLSQFKELVSFPCYTWSHVIVVPKGHPLLGLEQVT 120
Query: 186 LKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIAS 245
L+++ +PLITYD+ F+GR +D F + P IVL ++SD+I+ YV L MG+G++AS
Sbjct: 121 LEDLGTWPLITYDVGFTGRGHIDDAFRQAGIEPDIVLTAMDSDVIQQYVSLGMGVGLVAS 180
Query: 246 IAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINKILN 305
+A D + +++ +I+A+HLF I+R+ +++G YLR Y FI+ +P+L R I LN
Sbjct: 181 MAVDQGKHQDMVAINAAHLFKANIARLAVRRGAYLRGYALDFIQQFAPELKRADIVAALN 240
Query: 306 N 306
Sbjct: 241 E 241
>gi|400288751|ref|ZP_10790783.1| transcriptional regulator CysB-like protein [Psychrobacter sp. PAMC
21119]
Length = 309
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 181/297 (60%), Gaps = 1/297 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V V +NL++AA L+TSQ +SK I LE +L ++F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWHTVINGYNLSQAATVLHTSQSSLSKHIAALENQLKTEVFVRQGKRLTGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G A++ IE I EI ++ + +F+ + G LTIATTHTQARY LP+++KEF +FP
Sbjct: 74 TMGTALMPHIESIFAEIRTIENLSLDFNNPNVGTLTIATTHTQARYVLPQVVKEFKERFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
KV L L Q +P+ I +M+ QADI I TE L ++ L Y W + +IVP DH L
Sbjct: 134 KVNLILQQADPETIAQMVIRGQADIGIATESLLHNNYLRCYRYYDWTHRVIVPSDHELAS 193
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMGI 240
SI L +++YP++TY F+GR +D+ F+ L P IVL +++D+I TYV L +GI
Sbjct: 194 YESIDLPTLASYPIVTYHGGFTGRGAIDKTFTDAGLEPDIVLAALDADVISTYVGLGLGI 253
Query: 241 GIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNR 297
GIIA +AF+ + +NL +I H FG S + ++ +R Y +F++L + ++
Sbjct: 254 GIIAEMAFEPSHYQNLTAIPVDH-FGRFTSWMAVRDDAEIRQYGRAFMELCQKQFSQ 309
>gi|420336541|ref|ZP_14838119.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-315]
gi|391262383|gb|EIQ21412.1| HTH-type transcriptional regulator cbl [Shigella flexneri K-315]
Length = 292
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 185/277 (66%)
Query: 26 LYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLTKPGQAILRSIEIIMQEIEGLKKIGK 85
L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T+PG+A+L E I+ E ++++
Sbjct: 2 LFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLAD 61
Query: 86 EFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFPKVKLSLLQGNPKQITEMIRNDQADI 145
F+ +G LTIATTHTQARY+LP++IK F FP+V+L L+QG ++I +++N +ADI
Sbjct: 62 LFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTQQEIATLLQNGEADI 121
Query: 146 AIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLLLNSISLKEISNYPLITYDLSFSGRI 205
I +E LS +L++ P ++W + ++VP DHPL ++ ++L+ I+ +PLITY +GR
Sbjct: 122 GIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRS 181
Query: 206 KLDREFSLQKLTPYIVLETINSDIIKTYVELRMGIGIIASIAFDSNRDKNLRSISASHLF 265
++D F+ + L IVL +SD+IKTYV L +GIG++A + ++NL ++ HLF
Sbjct: 182 RIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLNTRHLF 241
Query: 266 GTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKFINK 302
+ +K+G R+YV+ F++L + L+ + I +
Sbjct: 242 DANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKR 278
>gi|333376512|ref|ZP_08468287.1| Cys regulon transcriptional activator CysB [Kingella kingae ATCC
23330]
gi|332967832|gb|EGK06931.1| Cys regulon transcriptional activator CysB [Kingella kingae ATCC
23330]
Length = 315
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 180/305 (59%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R+N N+++AA AL+TSQPGVSK I LE+EL + IFIR GKRI +T
Sbjct: 1 MKLQQLRYAVEVYRRNLNVSDAADALFTSQPGVSKQIRLLEDELGVSIFIRSGKRIVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G A+L + E +++ + +K IG EF+ +G LTIA TH A Y LP+++ +F +P
Sbjct: 61 PAGLAVLEAAEQMLRLAQNIKNIGHEFTDTHSGALTIAATHHWAHYQLPRMMPDFMQHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P ++ EM+RN D+A+ +I S + L +PC W Y + VP H L
Sbjct: 121 DVRLILRQGSPSELAEMVRNGDVDLAVGADIPSGAGDLKFLPCGTWRYALCVPNQHDLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFS-LQKLTPYIVLETINSDIIKTYVELRMG 239
++SL ++ YPL+TYD ++ R + T L++ +++I+K YV L +G
Sbjct: 181 QPALSLGDVLRYPLLTYDFTWHTGSAASRALAKTAHATVQAALQSDDAEILKQYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+ ++ A+D NRD +L + H F + ++ + + +R+Y+Y FI LL L +
Sbjct: 241 VALLDKSAYDINRDADLTLLDIGHCFEPSHYQIALHKDILMRNYLYDFIALLHSDLTHER 300
Query: 300 INKIL 304
+ ++L
Sbjct: 301 VQQLL 305
>gi|197287044|ref|YP_002152916.1| cys regulon transcriptional activator [Proteus mirabilis HI4320]
gi|227354708|ref|ZP_03839127.1| cys regulon transcriptional activator ( LysR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
gi|425070370|ref|ZP_18473483.1| hypothetical protein HMPREF1311_03578 [Proteus mirabilis WGLW6]
gi|425070681|ref|ZP_18473787.1| hypothetical protein HMPREF1310_00072 [Proteus mirabilis WGLW4]
gi|194684531|emb|CAR46329.1| cys regulon transcriptional activator ( LysR-family transcriptional
regulator) [Proteus mirabilis HI4320]
gi|227165218|gb|EEI50043.1| cys regulon transcriptional activator ( LysR-family transcriptional
regulator) [Proteus mirabilis ATCC 29906]
gi|404595153|gb|EKA95706.1| hypothetical protein HMPREF1311_03578 [Proteus mirabilis WGLW6]
gi|404600128|gb|EKB00577.1| hypothetical protein HMPREF1310_00072 [Proteus mirabilis WGLW4]
Length = 337
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 183/304 (60%), Gaps = 4/304 (1%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN++Q + E VR +FN+T AA+ LYTSQP +SK + LE+ELS+ +F+R + L+
Sbjct: 1 MNINQLKSFVEVVRNDFNITNAAEKLYTSQPTISKQLKILEDELSVSLFVRKNNNLLALS 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ + + I+ +++ +K I E +L IATTHTQ RY+LP +I F +P
Sbjct: 61 PMGKEVHKIASDILGQVDKIKSIVAEEDRNKKVDLHIATTHTQIRYSLPNVIDHFRRYYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+ L QG P Q+ EM++N D AI TE + + LI++PCY+W ++VP DHPL
Sbjct: 121 NISLHFHQGAPAQLAEMVKNGDVDFAIATESMHLYEDLITLPCYRWTRSLLVPYDHPLAS 180
Query: 181 L---NSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELR 237
L ++++++ YPLITY F+ KLD+ F L P + L +++IIK YV+
Sbjct: 181 LPDDQQVTIEQLGQYPLITYVFGFTRGSKLDKVFYKNHLKPQVALTATDTEIIKYYVKRH 240
Query: 238 MGIGIIASIAFDSNRD-KNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
+GIG+IA++A+D D + L+ I+ HL + + + + + T+++ Y++ FI L +P ++
Sbjct: 241 LGIGVIATVAYDEIEDSQALKCINIDHLVQPSYTHICLSKHTHMKDYMHEFISLYAPHID 300
Query: 297 RKFI 300
R I
Sbjct: 301 RNII 304
>gi|297522008|ref|ZP_06940394.1| transcriptional regulator Cbl [Escherichia coli OP50]
Length = 231
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 162/231 (70%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MN Q + +REA RQ++NLTE A L+TSQ GVS+ I ELE+EL I+IF+R GKR+ G+T
Sbjct: 1 MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+PG+A+L E I+ E ++++ F+ +G LTIATTHTQARY+LP++IK F FP
Sbjct: 61 EPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
+V+L L+QG P++I +++N +ADI I +E LS +L++ P ++W + ++VP DHPL
Sbjct: 121 EVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQ 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIK 231
++ ++L+ I+ +PLITY +GR ++D F+ + L IVL +SD+IK
Sbjct: 181 ISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIK 231
>gi|381401801|ref|ZP_09926693.1| transcriptional regulator CysB-like protein [Kingella kingae
PYKK081]
gi|380833200|gb|EIC13076.1| transcriptional regulator CysB-like protein [Kingella kingae
PYKK081]
Length = 315
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 179/305 (58%), Gaps = 1/305 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
M L Q R+ E R+N N+++AA AL+TSQPGVSK I LE+EL + IFIR GKRI +T
Sbjct: 1 MKLQQLRYAVEVYRRNLNVSDAADALFTSQPGVSKQIRLLEDELGVSIFIRSGKRIVAVT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G A+L + E +++ + +K IG EF+ +G LTIA TH Y LP+++ +F +P
Sbjct: 61 PAGLAVLEAAEQMLRLAQNIKNIGHEFTDTHSGALTIAATHHWTHYQLPRMMPDFMQHYP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L QG+P ++ EM+RN D+A+ +I S + L +PC W Y + VP H L
Sbjct: 121 DVRLILRQGSPSELAEMVRNGDVDLAVGADIPSGAGDLKFLPCGTWRYALCVPNQHDLTK 180
Query: 181 LNSISLKEISNYPLITYDLSFSGRIKLDREFS-LQKLTPYIVLETINSDIIKTYVELRMG 239
++SL ++ YPL+TYD ++ R + T L++ +++I+K YV L +G
Sbjct: 181 QPALSLGDVLRYPLLTYDFTWHTGSAASRALAKTAHATVQAALQSDDAEILKQYVRLGLG 240
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLNRKF 299
+ ++ A+D NRD +L + H F + ++ + + +R+Y+Y FI LL L +
Sbjct: 241 VALLDKSAYDINRDADLTLLDIGHCFEPSHYQIALHKDILMRNYLYDFIALLHSDLTHER 300
Query: 300 INKIL 304
+ ++L
Sbjct: 301 VQQLL 305
>gi|171463873|ref|YP_001797986.1| LysR family transcriptional regulator [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193411|gb|ACB44372.1| transcriptional regulator, LysR family [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 197
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 137/162 (84%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
MNLHQFRFVREAVRQNFNLT AAKAL+TSQPGVSKAIIELE+EL ++IF RHGKRIR LT
Sbjct: 1 MNLHQFRFVREAVRQNFNLTTAAKALFTSQPGVSKAIIELEDELGVEIFRRHGKRIRSLT 60
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
+P + IL SIE I+ E+E LK++GK+F++ D G+ IATTHTQARYALPK++ EFT +FP
Sbjct: 61 EPRKRILSSIERILDEVETLKRVGKDFASQDQGSFIIATTHTQARYALPKVLTEFTKRFP 120
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIP 162
KVK+S+ QG+P QI E++ +D+ADIAI TE ++ + ++++P
Sbjct: 121 KVKVSIQQGSPGQIAELLTHDRADIAIATEGIANTPGVLALP 162
>gi|430377089|ref|ZP_19431222.1| transcriptional regulator CysB-like protein [Moraxella macacae
0408225]
gi|429540226|gb|ELA08255.1| transcriptional regulator CysB-like protein [Moraxella macacae
0408225]
Length = 309
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 176/297 (59%), Gaps = 2/297 (0%)
Query: 1 MNLHQFRFVREAVRQNFNLTEAAKALYTSQPGVSKAIIELEEELSIDIFIRHGKRIRGLT 60
+ L Q V + V N+NL+++AK L+TSQ +SK I LE +L D+F+R GKR+ GLT
Sbjct: 14 IQLKQLETVWQTVINNYNLSQSAKVLHTSQSSLSKHIASLENQLRADVFVRQGKRLVGLT 73
Query: 61 KPGQAILRSIEIIMQEIEGLKKIGKEFSAYDTGNLTIATTHTQARYALPKIIKEFTIQFP 120
G+ +L IE I EI ++ + +F G L++ATTHTQARY LP +IK F +FP
Sbjct: 74 PIGKQLLPHIEKIFVEIRTIENLTLDFQNPTKGELSVATTHTQARYVLPWVIKRFKQKFP 133
Query: 121 KVKLSLLQGNPKQITEMIRNDQADIAIVTEILSPSDKLISIPCYQWEYVIIVPLDHPLLL 180
V+L L Q +P+ I M+ QADI I TE L D L I Y W + IIVP+ H L
Sbjct: 134 NVRLVLNQADPESIANMVAQGQADIGIATESLLAKDNLHCIRYYDWYHHIIVPVGHELAN 193
Query: 181 LNSI-SLKEISNYPLITYDLSFSGRIKLDREFSLQKLTPYIVLETINSDIIKTYVELRMG 239
L I L I +YP++TY F+GR +D+ F+ K+ P IVL +++D+I TYV L MG
Sbjct: 194 LQLIDDLSVIKDYPIVTYHGGFTGRGAIDKVFAQSKIEPNIVLTALDADVISTYVGLGMG 253
Query: 240 IGIIASIAFDSNRDKNLRSISASHLFGTTISRVIIKQGTYLRSYVYSFIKLLSPKLN 296
IG IA +AF+ +NL I + +FG +S + ++ +RS+ +FI + +
Sbjct: 254 IGTIAQMAFEGEHYRNLVKIP-TEIFGKHVSWIAVRADGEVRSFTKAFIAICQEQFG 309
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,224,253,881
Number of Sequences: 23463169
Number of extensions: 163118457
Number of successful extensions: 506362
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11217
Number of HSP's successfully gapped in prelim test: 31989
Number of HSP's that attempted gapping in prelim test: 467611
Number of HSP's gapped (non-prelim): 43879
length of query: 306
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 164
effective length of database: 9,027,425,369
effective search space: 1480497760516
effective search space used: 1480497760516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)