Query psy3761
Match_columns 256
No_of_seqs 173 out of 1247
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 16:36:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3761.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3761hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK07281 methionine aminopepti 100.0 9.9E-56 2.1E-60 375.0 27.3 244 1-247 13-284 (286)
2 PRK12897 methionine aminopepti 100.0 2.2E-55 4.8E-60 368.6 28.0 236 1-243 13-248 (248)
3 TIGR00500 met_pdase_I methioni 100.0 2.3E-54 4.9E-59 362.7 30.4 235 1-242 12-246 (247)
4 PRK05716 methionine aminopepti 100.0 1.9E-54 4.2E-59 364.2 29.9 239 1-246 14-252 (252)
5 PRK12318 methionine aminopepti 100.0 3.4E-54 7.5E-59 367.5 29.6 239 1-245 52-291 (291)
6 PLN03158 methionine aminopepti 100.0 3.5E-54 7.6E-59 378.5 29.2 240 1-247 146-386 (396)
7 PRK12896 methionine aminopepti 100.0 4.5E-53 9.8E-58 356.5 30.0 235 1-242 19-254 (255)
8 cd01086 MetAP1 Methionine Amin 100.0 1.6E-52 3.6E-57 349.6 29.6 235 1-242 4-238 (238)
9 COG0024 Map Methionine aminope 100.0 6.2E-52 1.3E-56 340.7 28.8 238 1-245 14-254 (255)
10 PRK09795 aminopeptidase; Provi 100.0 4.8E-52 1E-56 366.2 23.7 216 1-249 136-357 (361)
11 cd01090 Creatinase Creatine am 100.0 1.3E-50 2.7E-55 335.3 25.2 222 1-242 4-228 (228)
12 COG0006 PepP Xaa-Pro aminopept 100.0 9.3E-51 2E-55 360.9 23.3 216 1-249 163-382 (384)
13 cd01087 Prolidase Prolidase. E 100.0 5.3E-50 1.1E-54 335.5 23.6 220 1-242 4-243 (243)
14 KOG2738|consensus 100.0 1.2E-49 2.5E-54 324.4 23.4 242 1-249 125-367 (369)
15 PRK15173 peptidase; Provisiona 100.0 2.1E-48 4.6E-53 337.1 25.5 216 1-250 104-322 (323)
16 TIGR02993 ectoine_eutD ectoine 100.0 1.9E-48 4.1E-53 346.1 23.4 219 1-250 167-390 (391)
17 PRK14575 putative peptidase; P 100.0 8.2E-48 1.8E-52 343.3 25.9 216 1-250 187-405 (406)
18 PRK10879 proline aminopeptidas 100.0 7.6E-48 1.7E-52 345.9 25.5 223 1-247 182-425 (438)
19 PRK14576 putative endopeptidas 100.0 2.9E-47 6.2E-52 339.7 25.4 215 1-249 186-403 (405)
20 cd01092 APP-like Similar to Pr 100.0 1.3E-46 2.9E-51 307.7 24.2 204 1-237 4-208 (208)
21 cd01091 CDC68-like Related to 100.0 1.1E-45 2.5E-50 307.6 21.0 227 1-242 4-243 (243)
22 cd01085 APP X-Prolyl Aminopept 100.0 2.9E-45 6.2E-50 302.1 21.5 205 4-239 9-221 (224)
23 PF00557 Peptidase_M24: Metall 100.0 6.8E-45 1.5E-49 297.5 21.6 202 1-234 3-207 (207)
24 PRK13607 proline dipeptidase; 100.0 2.1E-43 4.6E-48 316.5 22.9 229 1-243 170-439 (443)
25 cd01066 APP_MetAP A family inc 100.0 9E-43 2E-47 283.8 23.0 203 1-237 4-207 (207)
26 PRK08671 methionine aminopepti 100.0 7E-42 1.5E-46 292.4 27.7 223 1-242 5-291 (291)
27 TIGR00495 crvDNA_42K 42K curve 100.0 2.3E-41 5E-46 298.0 28.8 243 1-251 22-347 (389)
28 cd01088 MetAP2 Methionine Amin 100.0 2.4E-41 5.3E-46 289.0 27.8 223 1-242 4-291 (291)
29 cd01089 PA2G4-like Related to 100.0 2.4E-41 5.2E-46 280.3 24.9 211 1-242 4-228 (228)
30 TIGR00501 met_pdase_II methion 100.0 9.8E-41 2.1E-45 285.5 27.5 223 1-242 8-295 (295)
31 PTZ00053 methionine aminopepti 100.0 7.7E-40 1.7E-44 290.3 26.8 228 1-244 161-468 (470)
32 KOG2414|consensus 100.0 9E-39 2E-43 270.9 15.7 221 1-247 237-477 (488)
33 KOG2737|consensus 100.0 5.3E-36 1.1E-40 251.8 12.4 236 1-247 194-471 (492)
34 KOG2413|consensus 99.9 1.5E-25 3.3E-30 199.2 17.7 206 2-237 322-536 (606)
35 KOG1189|consensus 99.9 3.6E-24 7.7E-29 193.4 14.7 228 1-251 146-386 (960)
36 KOG2775|consensus 99.8 4.7E-20 1E-24 151.5 16.5 228 1-244 88-395 (397)
37 KOG2776|consensus 99.8 8.8E-18 1.9E-22 141.3 19.7 239 2-246 25-343 (398)
38 COG5406 Nucleosome binding fac 99.7 1.4E-16 3.1E-21 142.2 12.7 175 56-246 243-421 (1001)
39 PLN03158 methionine aminopepti 97.7 0.00036 7.9E-09 62.3 10.7 117 96-234 126-247 (396)
40 cd01086 MetAP1 Methionine Amin 97.7 0.00069 1.5E-08 56.3 11.6 101 112-234 2-105 (238)
41 COG0024 Map Methionine aminope 97.7 0.00073 1.6E-08 56.4 11.4 86 113-201 13-101 (255)
42 PRK05716 methionine aminopepti 97.5 0.0019 4.2E-08 54.1 11.6 101 113-233 13-114 (252)
43 cd01088 MetAP2 Methionine Amin 97.5 0.0019 4.2E-08 55.5 11.4 83 112-201 2-85 (291)
44 PRK12896 methionine aminopepti 97.5 0.0018 3.9E-08 54.4 11.1 97 101-201 4-105 (255)
45 cd01066 APP_MetAP A family inc 97.4 0.0031 6.7E-08 50.6 11.1 100 1-109 104-204 (207)
46 cd01092 APP-like Similar to Pr 97.2 0.0053 1.2E-07 49.7 10.9 97 2-108 106-204 (208)
47 TIGR00495 crvDNA_42K 42K curve 96.9 0.02 4.2E-07 51.3 12.0 102 113-234 21-130 (389)
48 TIGR00500 met_pdase_I methioni 96.8 0.019 4.1E-07 48.0 11.2 98 2-109 119-238 (247)
49 TIGR00501 met_pdase_II methion 96.8 0.021 4.6E-07 49.2 11.6 96 113-234 7-104 (295)
50 cd01090 Creatinase Creatine am 96.8 0.025 5.4E-07 46.8 11.3 98 2-109 112-220 (228)
51 PRK08671 methionine aminopepti 96.8 0.029 6.4E-07 48.2 11.9 82 112-201 3-86 (291)
52 PRK15173 peptidase; Provisiona 96.7 0.024 5.3E-07 49.4 11.1 100 2-109 205-306 (323)
53 PRK12897 methionine aminopepti 96.6 0.02 4.3E-07 48.0 9.6 98 2-109 120-239 (248)
54 PRK09795 aminopeptidase; Provi 96.6 0.032 7E-07 49.4 11.3 97 2-108 243-341 (361)
55 PF00557 Peptidase_M24: Metall 96.6 0.045 9.7E-07 44.3 11.3 84 112-201 1-85 (207)
56 PRK14576 putative endopeptidas 96.5 0.041 8.8E-07 49.6 11.4 100 2-109 287-388 (405)
57 PRK14575 putative peptidase; P 96.5 0.037 8E-07 49.9 11.0 98 2-109 288-389 (406)
58 PTZ00053 methionine aminopepti 96.4 0.056 1.2E-06 49.3 11.9 84 114-201 161-248 (470)
59 cd01091 CDC68-like Related to 96.4 0.028 6E-07 47.1 9.3 99 2-109 122-234 (243)
60 cd01089 PA2G4-like Related to 96.4 0.068 1.5E-06 44.2 11.6 104 113-234 3-112 (228)
61 PRK12318 methionine aminopepti 96.3 0.052 1.1E-06 46.7 10.5 84 2-95 161-247 (291)
62 KOG2738|consensus 96.2 0.038 8.3E-07 46.7 8.9 85 113-201 124-211 (369)
63 PRK07281 methionine aminopepti 96.2 0.055 1.2E-06 46.4 10.1 97 2-108 151-270 (286)
64 cd01087 Prolidase Prolidase. E 96.1 0.073 1.6E-06 44.3 10.4 82 113-201 3-84 (243)
65 TIGR02993 ectoine_eutD ectoine 95.8 0.11 2.4E-06 46.6 10.7 97 2-109 273-374 (391)
66 COG0006 PepP Xaa-Pro aminopept 94.9 0.26 5.7E-06 44.0 10.1 98 2-109 265-367 (384)
67 cd01085 APP X-Prolyl Aminopept 93.5 0.86 1.9E-05 37.6 9.5 84 114-201 6-93 (224)
68 KOG2775|consensus 92.7 0.61 1.3E-05 39.7 7.5 84 112-201 86-175 (397)
69 PRK10879 proline aminopeptidas 92.7 1.5 3.2E-05 40.0 10.7 79 115-201 183-263 (438)
70 KOG2776|consensus 89.4 2.6 5.7E-05 36.8 8.3 93 113-235 23-133 (398)
71 PRK13607 proline dipeptidase; 82.4 16 0.00035 33.5 10.3 34 3-36 272-305 (443)
72 PF07305 DUF1454: Protein of u 78.6 14 0.0003 29.5 7.2 76 110-199 113-188 (200)
73 cd01666 TGS_DRG_C TGS_DRG_C: 69.8 19 0.00042 24.1 5.4 52 19-88 21-73 (75)
74 KOG1189|consensus 69.7 20 0.00043 34.8 7.2 100 2-109 260-368 (960)
75 PF00254 FKBP_C: FKBP-type pep 54.8 43 0.00093 22.8 5.3 50 78-136 3-59 (94)
76 PF04355 SmpA_OmlA: SmpA / Oml 50.4 11 0.00024 24.6 1.6 18 14-31 7-24 (71)
77 PF12631 GTPase_Cys_C: Catalyt 44.7 71 0.0015 21.0 4.8 43 110-152 10-52 (73)
78 COG0414 PanC Panthothenate syn 43.0 69 0.0015 27.3 5.4 54 98-154 184-238 (285)
79 PF02829 3H: 3H domain; Inter 39.4 1.2E+02 0.0026 21.5 5.5 72 80-154 18-96 (98)
80 COG5406 Nucleosome binding fac 38.5 1E+02 0.0022 29.6 6.3 72 10-92 309-385 (1001)
81 PLN02660 pantoate--beta-alanin 35.0 1.4E+02 0.003 25.6 6.2 55 97-154 187-242 (284)
82 smart00739 KOW KOW (Kyprides, 34.2 68 0.0015 16.1 3.2 23 80-103 2-24 (28)
83 cd04938 TGS_Obg-like TGS_Obg-l 34.1 97 0.0021 20.7 4.2 47 19-88 28-74 (76)
84 PF05184 SapB_1: Saposin-like 33.6 59 0.0013 18.1 2.7 33 4-36 3-35 (39)
85 PRK05728 DNA polymerase III su 32.5 2.2E+02 0.0047 21.5 6.7 97 2-114 16-116 (142)
86 PF04363 DUF496: Protein of un 32.2 62 0.0013 22.4 2.9 25 11-35 37-61 (95)
87 TIGR03147 cyt_nit_nrfF cytochr 32.0 55 0.0012 24.4 2.9 28 5-32 56-83 (126)
88 TIGR00018 panC pantoate--beta- 31.0 1.5E+02 0.0033 25.4 5.9 54 98-154 185-239 (282)
89 PRK05423 hypothetical protein; 30.3 70 0.0015 22.5 3.0 26 11-36 44-69 (104)
90 PRK01490 tig trigger factor; P 28.4 2.7E+02 0.0059 25.2 7.5 58 21-109 130-191 (435)
91 PRK06646 DNA polymerase III su 27.9 2.5E+02 0.0055 21.6 6.1 36 2-38 16-51 (154)
92 PF06135 DUF965: Bacterial pro 27.9 41 0.00088 22.8 1.5 28 137-164 16-43 (79)
93 PRK10144 formate-dependent nit 27.5 73 0.0016 23.7 2.9 28 5-32 56-83 (126)
94 COG0544 Tig FKBP-type peptidyl 23.8 2.1E+02 0.0045 26.3 5.8 18 80-97 158-175 (441)
95 TIGR03516 ppisom_GldI peptidyl 22.9 2.2E+02 0.0048 22.4 5.1 53 76-137 82-140 (177)
96 PF09958 DUF2192: Uncharacteri 22.4 2.9E+02 0.0062 22.9 5.7 44 113-158 5-48 (231)
97 KOG4152|consensus 21.7 2.1E+02 0.0045 27.0 5.2 68 81-167 74-144 (830)
98 PF11149 DUF2924: Protein of u 21.6 2.4E+02 0.0053 21.3 4.8 33 183-241 77-109 (136)
99 PRK05473 hypothetical protein; 20.9 63 0.0014 22.2 1.4 27 138-164 20-46 (86)
100 cd00560 PanC Pantoate-beta-ala 20.8 2.3E+02 0.0051 24.2 5.2 56 97-155 182-238 (277)
101 cd01669 TGS_Ygr210_C TGS_Ygr21 20.8 2.7E+02 0.0059 18.5 5.0 48 19-88 27-74 (76)
102 PF07870 DUF1657: Protein of u 20.6 67 0.0015 19.6 1.4 31 104-134 18-48 (50)
103 PF03477 ATP-cone: ATP cone do 20.0 1.1E+02 0.0024 20.7 2.6 35 6-41 39-73 (90)
No 1
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.9e-56 Score=374.98 Aligned_cols=244 Identities=39% Similarity=0.635 Sum_probs=222.5
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++|+++++.++.+.++||+||.||++.+++.+.+ .|+.+.+.++.+ .+.+||+++++|.|+..+|+.|++++|
T Consensus 13 mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~-~g~~~~~~G~~~--~~~~f~~~v~~G~n~~~~H~~p~~~~l 89 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKE-ENVLPLQIGVDG--AMMDYPYATCCGLNDEVAHAFPRHYIL 89 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH-cCCcccccCCCC--cccCCCcceEEeccccccCCCCCCcCc
Confidence 79999999999999999999999999999999999998 888776655433 135699999999999999999999999
Q ss_pred CCCCEEEEeEEE---------------------------EeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhc
Q psy3761 81 KKGDILNIDITV---------------------------IKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIK 133 (256)
Q Consensus 81 ~~Gd~v~id~g~---------------------------~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~k 133 (256)
++||+|++|+|+ .|+||++|++|||++|+|+++++++|+++.++++++++.+|
T Consensus 90 ~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~~~ai~~~k 169 (286)
T PRK07281 90 KEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAMYRGIEQAV 169 (286)
T ss_pred CCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999997 49999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHhcCCeeecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEE-ccCC
Q psy3761 134 PGIHLGDIGYAIQKHAEKYGYSVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKE-MSDG 212 (256)
Q Consensus 134 pG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~-~~~~ 212 (256)
||++++||++++++++++.|+..+.+++|||||+++||.|.++++..++++.+|+|||||+|||++|.+.+.+.. .+++
T Consensus 170 pG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~g 249 (286)
T PRK07281 170 VGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTG 249 (286)
T ss_pred CCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecccCCC
Confidence 999999999999999999999877899999999999999988655456788999999999999999987655443 3689
Q ss_pred ceEEecCCCceeEEEEEEEEcCCCeEEcCCCCCCC
Q psy3761 213 WTIKTKDRSLSAQWEHTVLVTKNGFEVLTISPNMP 247 (256)
Q Consensus 213 ~~~~~~~~~~~~~~edtv~Vt~~G~e~Lt~~~~~l 247 (256)
|++...++++++|+||||+||++|+|+||..+.+-
T Consensus 250 w~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~~~~~ 284 (286)
T PRK07281 250 WAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEER 284 (286)
T ss_pred ceEEecCCCcEEEeccEEEEeCCcceECCCCCccc
Confidence 99999999999999999999999999999987763
No 2
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.2e-55 Score=368.62 Aligned_cols=236 Identities=40% Similarity=0.674 Sum_probs=216.3
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+++.+.+ +|+.....++.+ |++++++|.|+..+|+.|++++|
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~-~G~~~~~~~~~~------~~~~i~~g~n~~~~H~~p~~~~l 85 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEK-HGATSEQKGYNG------YPYAICASVNDEMCHAFPADVPL 85 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHH-cCCcccccccCC------CCcceEeccCCEeecCCCCCccc
Confidence 69999999999999999999999999999999999998 888754333333 88889999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++++|||++++|+++++++++++.|+....++
T Consensus 86 ~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~~~~ 165 (248)
T PRK12897 86 TEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVARDF 165 (248)
T ss_pred CCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||||+++||.|.+.++..++++.+|+|||||++||++|.+........|+|+..+.++.+|+|+||||+||++|+|+|
T Consensus 166 ~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G~e~l 245 (248)
T PRK12897 166 TGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGPIIL 245 (248)
T ss_pred EECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCccEEe
Confidence 99999999999998765444567889999999999999998665555556899988888999999999999999999999
Q ss_pred CCC
Q psy3761 241 TIS 243 (256)
Q Consensus 241 t~~ 243 (256)
|..
T Consensus 246 t~~ 248 (248)
T PRK12897 246 TKL 248 (248)
T ss_pred ecC
Confidence 963
No 3
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=2.3e-54 Score=362.68 Aligned_cols=235 Identities=53% Similarity=0.894 Sum_probs=217.9
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ .|+.+.+.++. +|++.+++|.|+..+|+.|++++|
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~-~G~~~~~~~~~------~~~~~~~~~~n~~~~H~~~~~~~l 84 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEK-HGAKPAFLGYY------GFPGSVCISVNEVVIHGIPDKKVL 84 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-CCCCccccCCC------CCCceeEeccccEEEecCCCCccc
Confidence 69999999999999999999999999999999999988 89876544333 388888999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++.+|||++++||++++++++++.|+....++
T Consensus 85 ~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~~~~ 164 (247)
T TIGR00500 85 KDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVVREY 164 (247)
T ss_pred CCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887788
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||||+.+||.|.++++..++++.+|++||||++||++|.+.+++....++|++..+++.+|+|+||||+||++|+|+|
T Consensus 165 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~e~L 244 (247)
T TIGR00500 165 CGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGPEIL 244 (247)
T ss_pred cCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCccEEc
Confidence 99999999999997765544567899999999999999999888777777899999999999999999999999999999
Q ss_pred CC
Q psy3761 241 TI 242 (256)
Q Consensus 241 t~ 242 (256)
|.
T Consensus 245 t~ 246 (247)
T TIGR00500 245 TE 246 (247)
T ss_pred cC
Confidence 86
No 4
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.9e-54 Score=364.22 Aligned_cols=239 Identities=62% Similarity=1.063 Sum_probs=222.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ .|..+.+.++.+ |++.+++|.|+..+|+.|++++|
T Consensus 14 ~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~-~G~~~~~~~~~~------~~~~~~~g~~~~~~h~~~~~~~l 86 (252)
T PRK05716 14 MRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD-QGAIPAPLGYHG------FPKSICTSVNEVVCHGIPSDKVL 86 (252)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH-CCCEecccCCCC------CCcCeEecccceeecCCCCCccc
Confidence 69999999999999999999999999999999999988 888765433333 77788999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+++.|+||++|++|||++|+|+++++++|+++.++++++++++|||++++||++++++++++.|+....++
T Consensus 87 ~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~~~~ 166 (252)
T PRK05716 87 KEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVVREY 166 (252)
T ss_pred CCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877789
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||||+.+||.|.+.++..++++.+|+|||||++||++|.+.+.++..+++|++..+++.+|+++||||+||++|+|+|
T Consensus 167 ~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G~e~L 246 (252)
T PRK05716 167 CGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGPEIL 246 (252)
T ss_pred cccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCccEEe
Confidence 99999999999998766555788999999999999999999888888889999999999999999999999999999999
Q ss_pred CCCCCC
Q psy3761 241 TISPNM 246 (256)
Q Consensus 241 t~~~~~ 246 (256)
|..|++
T Consensus 247 t~~~~~ 252 (252)
T PRK05716 247 TLRPEE 252 (252)
T ss_pred eCCCCC
Confidence 999875
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.4e-54 Score=367.53 Aligned_cols=239 Identities=47% Similarity=0.841 Sum_probs=216.5
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++|++++++++.+.++||+||.||++.+++.+.+ .|..+.+.++.+ .+|++++++|.|+..+|+.|++++|
T Consensus 52 ~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~-~G~~~~~~~~~~----~~f~~~v~~g~n~~~~H~~p~~~~l 126 (291)
T PRK12318 52 IRKACQVTARILDALCEAAKEGVTTNELDELSRELHKE-YNAIPAPLNYGS----PPFPKTICTSLNEVICHGIPNDIPL 126 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-cCCCccccccCC----CCCCcceEeeccceeecCCCCCCcc
Confidence 69999999999999999999999999999988888877 887765544432 3488889999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+++.|+||++|++|||++|+|+++++++|+++.++++++++.+|||++++||++++++++++.|+....++
T Consensus 127 ~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~ 206 (291)
T PRK12318 127 KNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVDQF 206 (291)
T ss_pred CCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876789
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcC-CCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEE
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEG-RKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEV 239 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~ 239 (256)
+|||||+++||.|+++++ .++++.+|++||||++||++|.+ .+++...+++|++..+++..++++||||+||++|+|+
T Consensus 207 ~GHgIGl~~hE~P~i~~~-~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~G~e~ 285 (291)
T PRK12318 207 VGHGVGIKFHENPYVPHH-RNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITETGYEI 285 (291)
T ss_pred ccCCcCccccCCCcccCc-CCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCCccee
Confidence 999999999999988643 24567899999999999999984 4554434588999999999999999999999999999
Q ss_pred cCCCCC
Q psy3761 240 LTISPN 245 (256)
Q Consensus 240 Lt~~~~ 245 (256)
||..|+
T Consensus 286 LT~~~~ 291 (291)
T PRK12318 286 LTLLDK 291 (291)
T ss_pred CCCCCC
Confidence 999875
No 6
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.5e-54 Score=378.52 Aligned_cols=240 Identities=45% Similarity=0.792 Sum_probs=223.4
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+++.+.+ +|+.++.++|.+ ||..+++|.|+.++|+.|++++|
T Consensus 146 mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~-~Ga~ps~l~y~~------fp~svcts~N~~i~Hgip~~r~L 218 (396)
T PLN03158 146 MRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIA-AGGYPSPLNYHF------FPKSCCTSVNEVICHGIPDARKL 218 (396)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH-cCCccccccccC------CCceeeecccccccCCCCCCccC
Confidence 69999999999999999999999999999999999998 898887777665 89899999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||.+++++++++.|+..+.++
T Consensus 219 ~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~ 298 (396)
T PLN03158 219 EDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSY 298 (396)
T ss_pred CCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||||+.+||.|.|+++.......+|+|||||+|||+++.+.+.....+|+|++.+.++.+++++||||+||++|+|+|
T Consensus 299 ~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiL 378 (396)
T PLN03158 299 CGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVL 378 (396)
T ss_pred cCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceEC
Confidence 99999999999999876443334579999999999999998777777778999999999999999999999999999999
Q ss_pred CC-CCCCC
Q psy3761 241 TI-SPNMP 247 (256)
Q Consensus 241 t~-~~~~l 247 (256)
|. .|+.+
T Consensus 379 T~~~~~~~ 386 (396)
T PLN03158 379 TARLPSSP 386 (396)
T ss_pred CCCCCCCc
Confidence 96 56554
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4.5e-53 Score=356.47 Aligned_cols=235 Identities=45% Similarity=0.803 Sum_probs=217.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ .|..+.+..+.+ |++.+++|.|+..+|+.|++++|
T Consensus 19 ~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~-~G~~~~~~~~~~------~~~~~~~~~n~~~~h~~p~~~~l 91 (255)
T PRK12896 19 MRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEE-HGAIPSPEGYYG------FPGSTCISVNEEVAHGIPGPRVI 91 (255)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH-CCCEeCcccCCC------CCcceEecCCCeeEecCCCCccC
Confidence 69999999999999999999999999999999999988 898865443333 88888999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++.+|||++++||++++++++++.|+....++
T Consensus 92 ~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~~~~ 171 (255)
T PRK12896 92 KDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVVRDL 171 (255)
T ss_pred CCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred cccccCccccCCCcc-cccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEE
Q psy3761 161 CGHGIGKNFHEEPRV-MNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEV 239 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i-~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~ 239 (256)
+|||||+.+||.|.+ .++..++++.+|++||||++||+++.+...++..+++|++.+.++.+++++||||+||++|+|+
T Consensus 172 ~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~~G~e~ 251 (255)
T PRK12896 172 TGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGPEI 251 (255)
T ss_pred ccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcCCccee
Confidence 999999999999954 3333356789999999999999999998888888999999999999999999999999999999
Q ss_pred cCC
Q psy3761 240 LTI 242 (256)
Q Consensus 240 Lt~ 242 (256)
||+
T Consensus 252 Lt~ 254 (255)
T PRK12896 252 LTD 254 (255)
T ss_pred cCC
Confidence 996
No 8
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.6e-52 Score=349.63 Aligned_cols=235 Identities=60% Similarity=0.996 Sum_probs=217.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ +|..+.+..+.+ |+..+++|.|+..+|+.|++++|
T Consensus 4 lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~-~G~~~~~~~~~~------~~~~~~~~~~~~~~h~~~~~~~l 76 (238)
T cd01086 4 MREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEE-HGAYPAPLGYYG------FPKSICTSVNEVVCHGIPDDRVL 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH-cCCCcccccCCC------CCcceecCCCCceeCCCCCCccc
Confidence 69999999999999999999999999999999999988 898876544444 77778889999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+++.++||++|++|||++|+|+++++++|+.+.++++++++++|||++++||++++++++++.|+....++
T Consensus 77 ~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~ 156 (238)
T cd01086 77 KDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREF 156 (238)
T ss_pred CCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877789
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||+|+.+||.|.+..+..++++.+|++||||++||++|.+.++++.-+++|++..+++.+|+++||||+||++|+|+|
T Consensus 157 ~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~L 236 (238)
T cd01086 157 GGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEIL 236 (238)
T ss_pred cccCCCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeC
Confidence 99999999999997754444678899999999999999998877777777889988888999999999999999999999
Q ss_pred CC
Q psy3761 241 TI 242 (256)
Q Consensus 241 t~ 242 (256)
|.
T Consensus 237 t~ 238 (238)
T cd01086 237 TL 238 (238)
T ss_pred CC
Confidence 84
No 9
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.2e-52 Score=340.66 Aligned_cols=238 Identities=53% Similarity=0.869 Sum_probs=226.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC-Ccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG-NKI 79 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~-~~~ 79 (256)
||+|++|+..+++.+.+.++||+|..||...+++++++ +|+.+++++|.| ||..+|.|.|...+|+.|+ +++
T Consensus 14 ~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~-~ga~pa~~gy~g------~~~~~ciSvNe~v~HgiP~d~~v 86 (255)
T COG0024 14 MREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE-KGAYPAFLGYKG------FPFPTCISVNEVVAHGIPGDKKV 86 (255)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH-cCceehhccCcC------CCcceEeehhheeeecCCCCCcc
Confidence 79999999999999999999999999999999999999 999999999988 7777999999999999998 578
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCC-HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeec
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSRMFYVGEPS-LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVR 158 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~-~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~ 158 (256)
|++||+|.||+|+.++||++|.++||.+|+.+ +..+++.+++.+++.++++.+|||++.+||.++++++.+++||..++
T Consensus 87 lk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vVr 166 (255)
T COG0024 87 LKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVVR 166 (255)
T ss_pred cCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEee
Confidence 99999999999999999999999999999655 57777999999999999999999999999999999999999999999
Q ss_pred CccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEcc-CCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 159 EFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMS-DGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 159 ~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
.++|||||..+||.|+++++..++...+|+|||||+|||++..+.+.+...+ ++|++.++|+++.+++|+||+||++|+
T Consensus 167 ~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~~g~ 246 (255)
T COG0024 167 NLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTEDGC 246 (255)
T ss_pred cccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeCCCc
Confidence 9999999999999999999877666789999999999999999988888887 999999999999999999999999999
Q ss_pred EEcCCCCC
Q psy3761 238 EVLTISPN 245 (256)
Q Consensus 238 e~Lt~~~~ 245 (256)
|+||..+.
T Consensus 247 eilT~~~~ 254 (255)
T COG0024 247 EILTLRPE 254 (255)
T ss_pred EEeeCCCC
Confidence 99998764
No 10
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=4.8e-52 Score=366.22 Aligned_cols=216 Identities=27% Similarity=0.427 Sum_probs=198.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++|++++++.+.+.++||+||.||++.++..+.+ .|++. .+|++++++|.|+..||+.|++++|
T Consensus 136 ~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~-~G~~~-----------~~f~~iv~sG~~~~~ph~~~~~~~l 203 (361)
T PRK09795 136 IRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQ-QGAEK-----------ASFDTIVASGWRGALPHGKASDKIV 203 (361)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH-CCCCc-----------CCCCeEEEEeccccccCCCCCCcee
Confidence 68999999999999999999999999999999999998 88875 3388999999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCC--CCHH---HHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCe
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGE--PSLV---AKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYS 155 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~--~~~~---~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~ 155 (256)
++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+++.++++++++++|||++++||++++++++++.|+.
T Consensus 204 ~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~ 283 (361)
T PRK09795 204 AAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYG 283 (361)
T ss_pred cCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999963 3333 789999999999999999999999999999999999999997
Q ss_pred e-ecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 156 V-VREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 156 ~-~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
. +.|++|||||+++||.|.+. ++++.+|+|||||+|||++|.+ +|+ |+|+||||+||+
T Consensus 284 ~~~~h~~GHgiGl~~he~p~i~----~~~~~~l~~gmv~~iEpgiy~~---------~~~--------gvriEd~v~vt~ 342 (361)
T PRK09795 284 DYFGHNTGHAIGIEVHEDPRFS----PRDTTTLQPGMLLTVEPGIYLP---------GQG--------GVRIEDVVLVTP 342 (361)
T ss_pred ccCCCCCCccCCccccCCCCcC----CCCCCCcCCCCEEEECCEEEeC---------CCC--------EEEEeeEEEECC
Confidence 6 57999999999999999875 6788999999999999999972 222 789999999999
Q ss_pred CCeEEcCCCCCCCCC
Q psy3761 235 NGFEVLTISPNMPYP 249 (256)
Q Consensus 235 ~G~e~Lt~~~~~l~~ 249 (256)
+|+|+||..|++|.+
T Consensus 343 ~G~e~Lt~~~~~l~~ 357 (361)
T PRK09795 343 QGAEVLYAMPKTVLL 357 (361)
T ss_pred CCcEeCcCCCceEEE
Confidence 999999999999854
No 11
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.3e-50 Score=335.28 Aligned_cols=222 Identities=20% Similarity=0.200 Sum_probs=191.6
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCC-CCCCCCCCCCCCCCeeeeecCCeeeccCCCCcc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAP-LNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKI 79 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~-~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~ 79 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ .|+.... ..+ .++.+++.+|.|+..+|+.|++++
T Consensus 4 ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~-~ga~~~~~~~~------~~~~~~v~~G~~~~~~H~~~~~r~ 76 (228)
T cd01090 4 IRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVR-EIAKTFPEVEL------MDTWTWFQSGINTDGAHNPVTNRK 76 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-cCCccCCcccc------cCcceEEEeeccccccCCCCCCcc
Confidence 69999999999999999999999999999999999988 7765311 111 113357899999999999999999
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee-c
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV-R 158 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~-~ 158 (256)
|++||+|++|+++.++||++|++|||++|+|+++++++|+++.++++++++++|||++++||+++++++++++|+..+ .
T Consensus 77 l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~ 156 (228)
T cd01090 77 VQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT 156 (228)
T ss_pred cCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999763 6
Q ss_pred CccccccCccccCCCcc-cccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 159 EFCGHGIGKNFHEEPRV-MNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 159 ~~~GHgiG~~~~e~p~i-~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
+.+|||+|+..||.|.- ......+++.+|+|||||++||++|.+.+. ++.+|+|+||||+||++|+
T Consensus 157 ~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~-------------~g~gG~ried~v~Vt~~G~ 223 (228)
T cd01090 157 FGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQ-------------PGAGGYREHDILVINENGA 223 (228)
T ss_pred cccCcccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecccC-------------CCCcEEEeeeEEEECCCcc
Confidence 77999999999997621 001125677999999999999999964211 1234899999999999999
Q ss_pred EEcCC
Q psy3761 238 EVLTI 242 (256)
Q Consensus 238 e~Lt~ 242 (256)
|+||.
T Consensus 224 e~Lt~ 228 (228)
T cd01090 224 ENITG 228 (228)
T ss_pred ccCcC
Confidence 99984
No 12
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-51 Score=360.89 Aligned_cols=216 Identities=31% Similarity=0.503 Sum_probs=200.9
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++.++.++++.++||+||.||++.++..+.+ .|++. .+|++++++|.|++.+|+.|+++++
T Consensus 163 ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~-~G~~~-----------~sf~~iv~~G~n~a~pH~~~~~~~~ 230 (384)
T COG0006 163 IRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRK-GGAEG-----------PSFDTIVASGENAALPHYTPSDRKL 230 (384)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH-cCCCc-----------cCcCcEEeccccccCcCCCCCcccc
Confidence 69999999999999999999999999999999999999 88654 2499999999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~ 159 (256)
++||+|+||+|+.|+||++|+||||.+|+|+++|+++|+.+.++++++++++|||++++||+.++++++++.|+.. +.|
T Consensus 231 ~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h 310 (384)
T COG0006 231 RDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLH 310 (384)
T ss_pred cCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998876 578
Q ss_pred ccccccC--ccccCCCc-ccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCC
Q psy3761 160 FCGHGIG--KNFHEEPR-VMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNG 236 (256)
Q Consensus 160 ~~GHgiG--~~~~e~p~-i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G 236 (256)
.+|||+| +++||.|. +. +++..+|+|||||++||++|.+ +.+|+|+||+++||++|
T Consensus 311 ~~GHgvG~~l~vhE~p~~~~----~~~~~~L~~GMv~t~Epg~y~~-----------------g~~GirIEd~vlVte~G 369 (384)
T COG0006 311 GTGHGVGFVLDVHEHPQYLS----PGSDTTLEPGMVFSIEPGIYIP-----------------GGGGVRIEDTVLVTEDG 369 (384)
T ss_pred CccccCCCCcccCcCccccC----CCCCccccCCcEEEeccccccC-----------------CCceEEEEEEEEEcCCC
Confidence 8999999 99999994 54 7899999999999999998872 22378899999999999
Q ss_pred eEEcCCCCCCCCC
Q psy3761 237 FEVLTISPNMPYP 249 (256)
Q Consensus 237 ~e~Lt~~~~~l~~ 249 (256)
+|+||..|+++..
T Consensus 370 ~e~LT~~~~~~~~ 382 (384)
T COG0006 370 FEVLTRVPKELLV 382 (384)
T ss_pred ceecccCCcceee
Confidence 9999988887753
No 13
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=5.3e-50 Score=335.46 Aligned_cols=220 Identities=24% Similarity=0.275 Sum_probs=193.2
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+++.+.+ .|+.+. |++++++|.|+..+|+.|++++|
T Consensus 4 lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~G~~~~------------~~~~v~~g~~~~~~H~~~~~~~l 70 (243)
T cd01087 4 MRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRS-RGARLA------------YSYIVAAGSNAAILHYVHNDQPL 70 (243)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH-cCCCcC------------CCCeEEECCCccccCCCcCCCcC
Confidence 69999999999999999999999999999999999988 887621 78889999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCC-----
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYV-GEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGY----- 154 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~----- 154 (256)
++||+|++|+++.|+||++|++|||++ |+|+++++++|+++.++++++++.+|||++++||++++++++++.++
T Consensus 71 ~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~ 150 (243)
T cd01087 71 KDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGIL 150 (243)
T ss_pred CCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999 69999999999999999999999999999999999999999987632
Q ss_pred --------------eeecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCC
Q psy3761 155 --------------SVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDR 220 (256)
Q Consensus 155 --------------~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~ 220 (256)
..+.|.+|||||++.||.|.+. ..++++.+|++||||++||++|.+..... ..++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~--~~~~~~~~l~~GMv~~iEp~iy~~~~~~~-------~~~~~~ 221 (243)
T cd01087 151 KGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVGGYL--RYLRRARPLEPGMVITIEPGIYFIPDLLD-------VPEYFR 221 (243)
T ss_pred cCchHhhhhhhhhhhhcCCCCccccCcccccCcccc--ccCCCCCCCCCCCEEEECCEEEeCCcccc-------cccccc
Confidence 2357889999999999999651 11678899999999999999997431110 011224
Q ss_pred CceeEEEEEEEEcCCCeEEcCC
Q psy3761 221 SLSAQWEHTVLVTKNGFEVLTI 242 (256)
Q Consensus 221 ~~~~~~edtv~Vt~~G~e~Lt~ 242 (256)
.+|+++||||+||++|+|+||.
T Consensus 222 ~~g~~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 222 GGGIRIEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeEEEeeeEEEEcCCcceeCcC
Confidence 5689999999999999999985
No 14
>KOG2738|consensus
Probab=100.00 E-value=1.2e-49 Score=324.38 Aligned_cols=242 Identities=50% Similarity=0.851 Sum_probs=229.9
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++++..++..+...++||+|..||...++++..+ +|+.|+.++|.+ ||..+|.+.|..++|+.|+.|+|
T Consensus 125 mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ie-rg~YPSPLnYy~------FPKS~CTSVNEviCHGIPD~RpL 197 (369)
T KOG2738|consen 125 MRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIE-RGAYPSPLNYYG------FPKSVCTSVNEVICHGIPDSRPL 197 (369)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHh-cCCcCCCcccCC------CchhhhcchhheeecCCCCcCcC
Confidence 79999999999999999999999999999999999999 999999999988 99999999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
|+||+|.||+...++||+.|+.+||++|+.+++.+++.+..+++++.+++.+|||+++.||.+.+++...++||..++.+
T Consensus 198 edGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~y 277 (369)
T KOG2738|consen 198 EDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSY 277 (369)
T ss_pred CCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 161 CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 161 ~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|||||.-+|-.|.|++|.......++++||+|+|||.+..|.+.-..-+|+|+..+.|+..++++|+|+|||++|+|+|
T Consensus 278 cGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EIL 357 (369)
T KOG2738|consen 278 CGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEIL 357 (369)
T ss_pred hccccccccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceeh
Confidence 99999999999999988765456789999999999999999877666679999999999999999999999999999999
Q ss_pred CCC-CCCCCC
Q psy3761 241 TIS-PNMPYP 249 (256)
Q Consensus 241 t~~-~~~l~~ 249 (256)
|+. |...+.
T Consensus 358 T~r~~~~p~~ 367 (369)
T KOG2738|consen 358 TKRLPNSPWF 367 (369)
T ss_pred hcccCCCCCC
Confidence 974 555543
No 15
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=2.1e-48 Score=337.12 Aligned_cols=216 Identities=22% Similarity=0.295 Sum_probs=192.3
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+...+.+ .|.... . +.+++++|.+ ..+|+.|+++++
T Consensus 104 mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~-~g~~~~----------~-~~~~i~~G~~-~~~h~~~~~~~l 170 (323)
T PRK15173 104 LRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMS-KSETHF----------S-RFHLISVGAD-FSPKLIPSNTKA 170 (323)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH-cCCCCC----------C-CCcEEEECCC-CccCCCCCCCcc
Confidence 69999999999999999999999999999999888877 554321 1 2245777776 467888999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~ 159 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++++|||++++||++++++++++.|+.. +.+
T Consensus 171 ~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~ 250 (323)
T PRK15173 171 CSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRG 250 (323)
T ss_pred CCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 468
Q ss_pred ccccccCc--cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 160 FCGHGIGK--NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 160 ~~GHgiG~--~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
++|||+|+ .+||.|.+. ++++.+|++||||++||++|... .+|+++||||+||++|+
T Consensus 251 ~~GHGiG~~lg~~E~P~i~----~~~~~~Le~GMV~tiEPgiy~~g-----------------~ggvriEDtvlVTe~G~ 309 (323)
T PRK15173 251 HLGHGNGVFLGLEESPFVS----THATESFTSGMVLSLETPYYGYN-----------------LGSIMIEDMILINKEGI 309 (323)
T ss_pred CCCCcCCCCCCcCCCCCCC----CCCCCccCCCCEEEECCEEEcCC-----------------CcEEEEeeEEEEcCCcc
Confidence 89999996 789999875 46788999999999999999621 12688999999999999
Q ss_pred EEcCCCCCCCCCC
Q psy3761 238 EVLTISPNMPYPS 250 (256)
Q Consensus 238 e~Lt~~~~~l~~~ 250 (256)
|+||..|++|+..
T Consensus 310 e~LT~~p~~l~~~ 322 (323)
T PRK15173 310 EFLSKLPRDLVSF 322 (323)
T ss_pred eeCCCCCccceec
Confidence 9999999998753
No 16
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=1.9e-48 Score=346.14 Aligned_cols=219 Identities=20% Similarity=0.233 Sum_probs=191.3
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++|++++++++.+.++||+||.||++.+.+...+ +... ..+ .+.+|.+++++|.|+..+|+.|+++++
T Consensus 167 lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~--~~~~----~g~--~~~~~~~iv~sG~~~a~pH~~~~~~~l 238 (391)
T TIGR02993 167 MRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR--GVDG----FGG--DYPAIVPLLPSGADASAPHLTWDDSPM 238 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh--cccC----cCC--CcCCcccccccCccccCCCCCCCCCcc
Confidence 69999999999999999999999999999987654332 1110 000 012366778899999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCc
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREF 160 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~ 160 (256)
++||+|++|+++.|+||++|++|||++|+|+++++++|+.+.++++++++++|||++++||+++++++++++|+.. .|+
T Consensus 239 ~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~-~h~ 317 (391)
T TIGR02993 239 KVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK-DSR 317 (391)
T ss_pred cCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976 589
Q ss_pred cccccCccccCCC-----cccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCC
Q psy3761 161 CGHGIGKNFHEEP-----RVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKN 235 (256)
Q Consensus 161 ~GHgiG~~~~e~p-----~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~ 235 (256)
+|||||++.|+.| .+. ++++.+|++||||++||++|.+.+ |+++||+|+||++
T Consensus 318 ~GhgiGl~~~~~~~e~~~~l~----~~~~~~L~~GMv~tvEpgiy~~~~------------------Gvried~v~VT~~ 375 (391)
T TIGR02993 318 TGYPIGLSYPPDWGERTMSLR----PGDNTVLKPGMTFHFMTGLWMEDW------------------GLEITESILITET 375 (391)
T ss_pred ceeeeccCcCCCCCCcccccc----CCCCceecCCCEEEEcceeEeCCC------------------CeEEeeEEEECCC
Confidence 9999999987533 443 678899999999999999997322 5789999999999
Q ss_pred CeEEcCCCCCCCCCC
Q psy3761 236 GFEVLTISPNMPYPS 250 (256)
Q Consensus 236 G~e~Lt~~~~~l~~~ 250 (256)
|+|+||..|++|+..
T Consensus 376 G~e~Lt~~p~~l~~~ 390 (391)
T TIGR02993 376 GVECLSSVPRKLFVK 390 (391)
T ss_pred cceecccCCcccEeC
Confidence 999999999999654
No 17
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=8.2e-48 Score=343.27 Aligned_cols=216 Identities=22% Similarity=0.298 Sum_probs=194.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++++++++.+.++||+||.||++.+.+.+.+ .|.... ++.+++.+|.+ ..+|+.|+++++
T Consensus 187 ~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~-~g~~~~-----------~~~~~v~~G~~-~~~h~~~~~~~l 253 (406)
T PRK14575 187 LRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMS-KSETHF-----------SRFHLISVGAD-FSPKLIPSNTKA 253 (406)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-cCCCcC-----------CcCceEEECCC-cccCCCCCCCcC
Confidence 69999999999999999999999999999999888877 665431 12246777877 568999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~ 159 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++++|||++++||++++++++++.|+.. +.+
T Consensus 254 ~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~ 333 (406)
T PRK14575 254 CSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRG 333 (406)
T ss_pred CCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 468
Q ss_pred ccccccCc--cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 160 FCGHGIGK--NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 160 ~~GHgiG~--~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
++|||+|+ .+||.|++. .+++.+|+|||||++||++|... .+|+++||||+||++|+
T Consensus 334 ~~GHGiG~~lg~~e~P~i~----~~~~~~Le~GMv~tiEpgiy~~g-----------------~gGvriEDtvlVT~~G~ 392 (406)
T PRK14575 334 HLGHGNGVFLGLEESPFVS----THATESFTSGMVLSLETPYYGYN-----------------LGSIMIEDMILINKEGI 392 (406)
T ss_pred CCCCcccCCCCCccCCCCC----CCCCCCcCCCCEEEECCeeecCC-----------------CcEEEEEeEEEEcCCCc
Confidence 89999995 889999875 56789999999999999999621 12788999999999999
Q ss_pred EEcCCCCCCCCCC
Q psy3761 238 EVLTISPNMPYPS 250 (256)
Q Consensus 238 e~Lt~~~~~l~~~ 250 (256)
|+||..|++|+..
T Consensus 393 e~LT~~p~~l~~~ 405 (406)
T PRK14575 393 EFLSKLPRDLVSF 405 (406)
T ss_pred ccCCCCCcccccC
Confidence 9999999999764
No 18
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=7.6e-48 Score=345.87 Aligned_cols=223 Identities=20% Similarity=0.282 Sum_probs=196.2
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++.++.++++.++||+||.||++.+.+.+.+ .|+.. .+|++++++|.|+..+|+.|++++|
T Consensus 182 ~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~-~G~~~-----------~~~~~iv~~G~na~~~H~~~~~~~l 249 (438)
T PRK10879 182 LRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNR-HGARY-----------PSYNTIVGSGENGCILHYTENESEM 249 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH-CCCCC-----------CCCCcEEEEcCccccccCCCCcccc
Confidence 69999999999999999999999999999999999988 78753 2388899999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHH---------
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYV-GEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAE--------- 150 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~--------- 150 (256)
++||+|++|+|+.|+||++|++|||.+ |+++++|+++|+++.++++++++++|||+++++|++++.+++.
T Consensus 250 ~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~ 329 (438)
T PRK10879 250 RDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGIL 329 (438)
T ss_pred CCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999 8999999999999999999999999999999999999986653
Q ss_pred ---------hcCCee-ecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCC
Q psy3761 151 ---------KYGYSV-VREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDR 220 (256)
Q Consensus 151 ---------~~G~~~-~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~ 220 (256)
+.++.. +.|.+||++|+++||.|.+. ++++.+|+|||||+|||++|.+. ++.+..+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~----~~~~~~L~~GmV~tvEPgiY~~~--------~~~~~~~~~ 397 (438)
T PRK10879 330 KGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG----QDRSRILEPGMVLTVEPGLYIAP--------DADVPEQYR 397 (438)
T ss_pred CCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC----CCCCCcCCCCCEEEECCEEEECC--------CcCcccccC
Confidence 334433 57899999999999988653 45778999999999999999732 222333445
Q ss_pred CceeEEEEEEEEcCCCeEEcCC-CCCCC
Q psy3761 221 SLSAQWEHTVLVTKNGFEVLTI-SPNMP 247 (256)
Q Consensus 221 ~~~~~~edtv~Vt~~G~e~Lt~-~~~~l 247 (256)
++|+|+||+|+||++|+|+||. .|+++
T Consensus 398 ~~GiRiED~VlVT~~G~e~LT~~~pk~~ 425 (438)
T PRK10879 398 GIGIRIEDDIVITETGNENLTASVVKKP 425 (438)
T ss_pred ccEEEeccEEEECCCcCeEcCccCCCCH
Confidence 5699999999999999999996 78765
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.9e-47 Score=339.68 Aligned_cols=215 Identities=21% Similarity=0.242 Sum_probs=194.0
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|++++++++.++.+.++||+||.||++.++..+.+ .|... .++.+++++|.+ ..+|..|+++++
T Consensus 186 ~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~-~g~~~-----------~~~~~~v~~G~~-~~~h~~~~~~~l 252 (405)
T PRK14576 186 LRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMS-FPETN-----------FSRFNLISVGDN-FSPKIIADTTPA 252 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH-cCCCc-----------CCCCCEEEECCc-ccCCCCCCCccc
Confidence 68999999999999999999999999999999998887 66432 113357888988 568999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~ 159 (256)
++||+|++|+|+.|+||++|++|||++|+|+++++++|+++.++++++++++|||++++||++++++++++.|+.. +.+
T Consensus 253 ~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~ 332 (405)
T PRK14576 253 KVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRG 332 (405)
T ss_pred CCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975 468
Q ss_pred ccccccC--ccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 160 FCGHGIG--KNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 160 ~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
++|||+| +.+||.|.+. ++++.+|++||||++||++|.. +.+|+++||||+||++|+
T Consensus 333 ~~GHgiG~~l~~~e~P~i~----~~~~~~Le~GMv~~vEp~~y~~-----------------g~ggvriEDtvlVTe~G~ 391 (405)
T PRK14576 333 HLGHGDGVFLGLEEVPFVS----TQATETFCPGMVLSLETPYYGI-----------------GVGSIMLEDMILITDSGF 391 (405)
T ss_pred CCCCCCCCCCCcCcCCCcC----CCCCCccCCCCEEEECCceeec-----------------CCCEEEEeeEEEECCCcc
Confidence 8999999 7889999874 6788999999999999998862 122788999999999999
Q ss_pred EEcCCCCCCCCC
Q psy3761 238 EVLTISPNMPYP 249 (256)
Q Consensus 238 e~Lt~~~~~l~~ 249 (256)
|+||..|++|..
T Consensus 392 e~LT~~p~~l~~ 403 (405)
T PRK14576 392 EFLSKLDRDLRR 403 (405)
T ss_pred ccCCCCCccccc
Confidence 999999999864
No 20
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.3e-46 Score=307.70 Aligned_cols=204 Identities=31% Similarity=0.536 Sum_probs=189.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++.+++++.+.++||+||.||++.+++.+.+ .|.+. .+|++++++|.|+..+|+.|+++++
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~-~g~~~-----------~~~~~~v~~g~~~~~~h~~~~~~~l 71 (208)
T cd01092 4 LRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRK-LGAEG-----------PSFDTIVASGPNSALPHGVPSDRKI 71 (208)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHH-cCCCC-----------CCCCcEEEECccccccCCCCCCcCc
Confidence 69999999999999999999999999999999999988 88764 2388999999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~ 159 (256)
++||+|++|+|+.|+||++|++||+++|+|+++++++|+++.++++.+++.+|||++++||+++++++++++|+.. +.|
T Consensus 72 ~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~ 151 (208)
T cd01092 72 EEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIH 151 (208)
T ss_pred CCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999865 478
Q ss_pred ccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 160 FCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 160 ~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
.+||+||+..||.|.+. ++++.+|++||||+|||+++.+. .+|+++||||+||++|+
T Consensus 152 ~~Gh~iG~~~~e~p~i~----~~~~~~l~~gmv~~iep~~~~~~-----------------~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 152 RTGHGVGLEVHEAPYIS----PGSDDVLEEGMVFTIEPGIYIPG-----------------KGGVRIEDDVLVTEDGC 208 (208)
T ss_pred CCccccCcccCcCCCcC----CCCCCCcCCCCEEEECCeEEecC-----------------CCEEEeeeEEEECCCCC
Confidence 89999999999999875 67889999999999999998621 23789999999999985
No 21
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.1e-45 Score=307.63 Aligned_cols=227 Identities=19% Similarity=0.256 Sum_probs=192.5
Q ss_pred ChHHHHHHHHHHHHHhh-----cCCCC--CCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC-eeec
Q psy3761 1 MRIAGKLSAEVLDYIAP-----FIKPG--VTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND-VVCH 72 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~-----~i~pG--~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~-~~~h 72 (256)
||+|++++..+|...+. .|.+| +|+.+|+..++..+.+ .+.... .++.+...++|++++++|.|. ..+|
T Consensus 4 ~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~-~~~~~~--~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 4 IKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIED-KKKYKA--KLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhC-chhhhc--CCCHHHcCcccCCeEeECcCcccCCC
Confidence 69999999999986666 89999 9999999999999988 664311 112122235699999999999 8999
Q ss_pred cCCCCcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhc
Q psy3761 73 GIPGNKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKY 152 (256)
Q Consensus 73 ~~p~~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~ 152 (256)
+.++++.++.|++|++|+|++|+|||+|++|||++| |+++++++|+++.++++++++.+|||++++||++++++++++.
T Consensus 81 ~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~ 159 (243)
T cd01091 81 SSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK 159 (243)
T ss_pred CCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997 7999999999999999999999999999999999999999998
Q ss_pred CCee---ecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEc-CCCceEEccCCceEEecCCCceeEEEE
Q psy3761 153 GYSV---VREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINE-GRKEIKEMSDGWTIKTKDRSLSAQWEH 228 (256)
Q Consensus 153 G~~~---~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~ed 228 (256)
|... +.|.+|||||+++||.|.+.+ ++++.+|++||||++||++|. ... .....+++.+|+++||
T Consensus 160 ~~~~~~~~~~~~GHgiGle~hE~~~~l~---~~~~~~L~~GMvf~vepGi~~~~~~--------~~~~~~~~~~gv~ieD 228 (243)
T cd01091 160 KPELEPNFTKNLGFGIGLEFRESSLIIN---AKNDRKLKKGMVFNLSIGFSNLQNP--------EPKDKESKTYALLLSD 228 (243)
T ss_pred ChhHHHhCcCCcccccCcccccCccccC---CCCCCCcCCCCEEEEeCCcccccCc--------cccCccCCeeEEEEEE
Confidence 7432 467899999999999885433 677899999999999999983 211 0011234567999999
Q ss_pred EEEEcCCCe-EEcCC
Q psy3761 229 TVLVTKNGF-EVLTI 242 (256)
Q Consensus 229 tv~Vt~~G~-e~Lt~ 242 (256)
||+||++|+ |+||.
T Consensus 229 tV~Vt~~G~~~~LT~ 243 (243)
T cd01091 229 TILVTEDEPAIVLTN 243 (243)
T ss_pred EEEEcCCCCceecCC
Confidence 999999999 99984
No 22
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=2.9e-45 Score=302.05 Aligned_cols=205 Identities=20% Similarity=0.207 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHhhcCCCC--CCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC---Cc
Q psy3761 4 AGKLSAEVLDYIAPFIKPG--VTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG---NK 78 (256)
Q Consensus 4 A~~i~~~~~~~~~~~i~pG--~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~---~~ 78 (256)
++++..++++.+.+.++|| +||.||++.+++.+.. .|... + .+|++++++|.|+..+|+.|+ ++
T Consensus 9 ~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~-~g~~~------~----~~f~~~v~~g~n~~~~H~~p~~~~~r 77 (224)
T cd01085 9 DGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQ-QKGYV------G----LSFDTISGFGPNGAIVHYSPTEESNR 77 (224)
T ss_pred HHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHH-cCCCc------C----CCcceEEEecCccCcCCCCcCcccCc
Confidence 3444458888899999999 9999999999987766 54321 1 238999999999999999998 89
Q ss_pred ccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCchhhHHHHHHHHHHhcCCeee
Q psy3761 79 ILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKI-KPGIHLGDIGYAIQKHAEKYGYSVV 157 (256)
Q Consensus 79 ~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~-kpG~~~~ev~~~~~~~~~~~G~~~~ 157 (256)
+|++||+|++|+++.++||++|++|||++|+++++++++|+.+.+++.++++.+ +||+++++|++++++.+.+.|+. +
T Consensus 78 ~l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~ 156 (224)
T cd01085 78 KISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-Y 156 (224)
T ss_pred ccCCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-C
Confidence 999999999999999999999999999999999999999999999999999888 59999999999999999999986 4
Q ss_pred cCccccccC--ccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCC
Q psy3761 158 REFCGHGIG--KNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKN 235 (256)
Q Consensus 158 ~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~ 235 (256)
.|++||||| +++||.|.+. ..++++.+|++||||++||++|.+. .+|+|+||+|+||++
T Consensus 157 ~h~~GHgIG~~l~~hE~P~i~--~~~~~~~~L~~GmvftiEP~iy~~g-----------------~~gvried~v~Vt~~ 217 (224)
T cd01085 157 GHGTGHGVGSFLNVHEGPQSI--SPAPNNVPLKAGMILSNEPGYYKEG-----------------KYGIRIENLVLVVEA 217 (224)
T ss_pred CCCCCCCCCCCCcCCCCCCcC--CcCCCCCCcCCCCEEEECCEeEeCC-----------------CeEEEeeEEEEEeeC
Confidence 688999999 5889999763 1156788999999999999999621 226889999999999
Q ss_pred CeEE
Q psy3761 236 GFEV 239 (256)
Q Consensus 236 G~e~ 239 (256)
|+.-
T Consensus 218 G~~~ 221 (224)
T cd01085 218 ETTE 221 (224)
T ss_pred CcCC
Confidence 9854
No 23
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=6.8e-45 Score=297.51 Aligned_cols=202 Identities=31% Similarity=0.512 Sum_probs=180.4
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHH-HHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCcc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNY-MVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKI 79 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~-~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~ 79 (256)
||+|+++++++++++++.++|||||.||++.+.+. +.+ .|... .+|++++++|.|...+|+.|++++
T Consensus 3 ~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-~g~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~ 70 (207)
T PF00557_consen 3 MRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRR-HGGEE-----------PAFPPIVGSGPNTDLPHYTPTDRR 70 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHH-TTTTE-----------ESSESEEEECCCCGETTTBCCSSB
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH-cCCCc-----------ccCCceEecCCcceecceecccee
Confidence 69999999999999999999999999999999998 455 67543 238889999999999999999999
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCC-eeec
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGY-SVVR 158 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~-~~~~ 158 (256)
|++||+|++|++++|+||++|++||+++| |+++++++|+.++++++.+++.+|||++++||++++++.++++|+ ..+.
T Consensus 71 l~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~ 149 (207)
T PF00557_consen 71 LQEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYP 149 (207)
T ss_dssp ESTTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBT
T ss_pred eecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceee
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999999999 5568
Q ss_pred CccccccCccccCC-CcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 159 EFCGHGIGKNFHEE-PRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 159 ~~~GHgiG~~~~e~-p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
+.+||+||+..||. |++.. ++++.+|++||||++||.++.. ++|+ ++++||+++||+
T Consensus 150 ~~~GH~iG~~~~~~~P~i~~---~~~~~~l~~gmv~~iep~~~~~--------~~~~--------g~~~ed~v~Vte 207 (207)
T PF00557_consen 150 HGLGHGIGLEFHEPGPNIAR---PGDDTVLEPGMVFAIEPGLYFI--------PGWG--------GVRFEDTVLVTE 207 (207)
T ss_dssp SSSEEEESSSSSEEEEEESS---TTTSSB--TTBEEEEEEEEEEE--------TTSE--------EEEEBEEEEEES
T ss_pred ecccccccccccccceeeec---ccccceecCCCceeEeeeEEcc--------CCCc--------EEEEEEEEEECc
Confidence 99999999999987 88743 4688999999999999998831 2332 789999999996
No 24
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.1e-43 Score=316.54 Aligned_cols=229 Identities=19% Similarity=0.199 Sum_probs=180.4
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCc-c
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNK-I 79 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~-~ 79 (256)
||+|+++++++++++++.++||+||.||.+.+.... . .+... .+|++++++|.|+..+|+.++++ .
T Consensus 170 mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~-~~~~~-----------~~y~~iva~G~naa~~H~~~~~~~~ 236 (443)
T PRK13607 170 MREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-G-QRDND-----------VPYGNIVALNEHAAVLHYTKLDHQA 236 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-C-CCCcC-----------CCCCcEEEecCcceEecCCccCCCC
Confidence 799999999999999999999999999998654322 1 22211 34899999999999999999874 6
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHH----HhcCCe
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHA----EKYGYS 155 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~----~~~G~~ 155 (256)
+++||+|++|+|+.|+||++|++|||+ |+++++++++|+++.++++++++.+|||++++||+.++++++ .+.|+.
T Consensus 237 ~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~ 315 (443)
T PRK13607 237 PAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIV 315 (443)
T ss_pred CCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999999999999999999 889999999999999999999999999999999999998766 334433
Q ss_pred ----------------eecCccccccCccccCCCccccc------------CCCCCCCeecCCCEEEEeeEEEcCCCceE
Q psy3761 156 ----------------VVREFCGHGIGKNFHEEPRVMNY------------GIPGTLEKLKTGMIFTVEPMINEGRKEIK 207 (256)
Q Consensus 156 ----------------~~~~~~GHgiG~~~~e~p~i~~~------------~~~~~~~~l~~gmv~~iep~~~~~~~~v~ 207 (256)
.++|.+||+||+++||.+..... ....+..+|+|||||+|||++|....-+.
T Consensus 316 ~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~~ll~ 395 (443)
T PRK13607 316 TGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFIDSLLA 395 (443)
T ss_pred CCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeeeeChhhhc
Confidence 35799999999999997432100 00135689999999999999998421000
Q ss_pred Ec-c------CCceEEecC-CCceeEEEEEEEEcCCCeEEcCCC
Q psy3761 208 EM-S------DGWTIKTKD-RSLSAQWEHTVLVTKNGFEVLTIS 243 (256)
Q Consensus 208 ~~-~------~~~~~~~~~-~~~~~~~edtv~Vt~~G~e~Lt~~ 243 (256)
.. . -.|..+++. +.+|+|+||+|+||++|+|+||..
T Consensus 396 ~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~~ 439 (443)
T PRK13607 396 PLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTRD 439 (443)
T ss_pred hhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECChh
Confidence 00 0 011111111 344999999999999999999964
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=9e-43 Score=283.79 Aligned_cols=203 Identities=28% Similarity=0.445 Sum_probs=187.4
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+++++.++.++.+.++||+||.|+.+.+.+.+.+ .|+.+ ++++++++|.|...+|+.|+++++
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~-~g~~~------------~~~~~v~~g~~~~~~h~~~~~~~i 70 (207)
T cd01066 4 LRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRA-AGGYP------------AGPTIVGSGARTALPHYRPDDRRL 70 (207)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHH-cCCCC------------CCCcEEEECccccCcCCCCCCCCc
Confidence 68999999999999999999999999999999999998 88732 277889999988899999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCe-eecC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYS-VVRE 159 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~-~~~~ 159 (256)
++||+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||+++.||++++++++++.|+. ...+
T Consensus 71 ~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~ 150 (207)
T cd01066 71 QEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGH 150 (207)
T ss_pred CCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999983 4578
Q ss_pred ccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCe
Q psy3761 160 FCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGF 237 (256)
Q Consensus 160 ~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~ 237 (256)
++||++|+..||.|.+. ++++.+|++||+|++||.++.+. .+++++||+++||++|+
T Consensus 151 ~~Gh~iG~~~~e~~~~~----~~~~~~l~~gmv~~iep~~~~~~-----------------~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 151 RTGHGIGLEIHEPPVLK----AGDDTVLEPGMVFAVEPGLYLPG-----------------GGGVRIEDTVLVTEDGP 207 (207)
T ss_pred CCccccCcccCCCCCcC----CCCCCCcCCCCEEEECCEEEECC-----------------CcEEEeeeEEEEeCCCC
Confidence 99999999999999753 67889999999999999998632 23789999999999985
No 26
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=7e-42 Score=292.37 Aligned_cols=223 Identities=31% Similarity=0.555 Sum_probs=195.9
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC---C
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG---N 77 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~---~ 77 (256)
||+|++|++++++++.+.++||+||.||++.+++.+.+ .|..++ ||+.++ .|+..+|+.|. +
T Consensus 5 ~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~-~g~~~a------------fp~~vs--~n~~~~H~~p~~~d~ 69 (291)
T PRK08671 5 YLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRE-LGAKPA------------FPCNIS--INEVAAHYTPSPGDE 69 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH-cCCccC------------CCCEEe--eCCCccCCCCCCCCC
Confidence 68999999999999999999999999999999999998 886543 876655 45567899886 6
Q ss_pred cccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee
Q psy3761 78 KILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV 157 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~ 157 (256)
++|++||+|++|+|++++||++|++||+++| ++++++++++.++++++++.+|||++++||+++++++++++|+..+
T Consensus 70 ~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 70 RVFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred cccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc
Confidence 8899999999999999999999999999998 4788999999999999999999999999999999999999999887
Q ss_pred cCccccccCc-cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEc---------------------------
Q psy3761 158 REFCGHGIGK-NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEM--------------------------- 209 (256)
Q Consensus 158 ~~~~GHgiG~-~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~--------------------------- 209 (256)
.+++|||||+ .+|+.|.+++. .++++.+|+|||||+|||.+..|.|.++.-
T Consensus 147 ~~~~GHgiG~~~~he~p~ip~~-~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~ 225 (291)
T PRK08671 147 RNLTGHGLERYELHAGPSIPNY-DEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIE 225 (291)
T ss_pred CCCcccCcCCCcccCCCccCcc-CCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHH
Confidence 8999999997 78999887643 256789999999999999999888887731
Q ss_pred -------------cCCce--------------------EEecCCCceeEEEEEEEEcCCCeEEcCC
Q psy3761 210 -------------SDGWT--------------------IKTKDRSLSAQWEHTVLVTKNGFEVLTI 242 (256)
Q Consensus 210 -------------~~~~~--------------------~~~~~~~~~~~~edtv~Vt~~G~e~Lt~ 242 (256)
++... +.++++++.+++|+||+|+++|++++|.
T Consensus 226 ~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 226 EEYNTLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred HHCCCCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 00000 4667889999999999999999999984
No 27
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=2.3e-41 Score=298.02 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=209.0
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCC----CCCCCCCCCCCCeeeeecCCeeeccCC-
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLN----YCPQKGGIPFPKSICTSVNDVVCHGIP- 75 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~----~~g~~~~~~~~~~v~~g~~~~~~h~~p- 75 (256)
||+|++|++++++.+.+.++||+|+.||++.+++.+.+ .++. .+.. +.| ++|| .|++.|+..+|+.|
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~-~~a~-~~~~~~~~~~g----~afp--t~vSvN~~v~H~~P~ 93 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIME-ETAK-IFKKEKEMEKG----IAFP--TCISVNNCVGHFSPL 93 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-hhhh-hhcccccccCC----CCCC--eEEecCCeeeCCCCC
Confidence 68999999999999999999999999999999998887 5543 2211 223 5577 45568999999998
Q ss_pred -C--CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHH
Q psy3761 76 -G--NKILKKGDILNIDITVIKNGYYGDTSRMFYVGE-----PSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQK 147 (256)
Q Consensus 76 -~--~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~-----~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~ 147 (256)
+ +++|++||+|+||+|++++||++|++|||++|+ ++++++++++++.+|++++++.+|||++++||.+++++
T Consensus 94 ~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~ 173 (389)
T TIGR00495 94 KSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINK 173 (389)
T ss_pred CCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 2 488999999999999999999999999999995 46789999999999999999999999999999999999
Q ss_pred HHHhcCCeeecCccccccCccccC-CCcc-cccC----CCCCCCeecCCCEEEEeeEEEcCCCceEEccCCce-------
Q psy3761 148 HAEKYGYSVVREFCGHGIGKNFHE-EPRV-MNYG----IPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWT------- 214 (256)
Q Consensus 148 ~~~~~G~~~~~~~~GHgiG~~~~e-~p~i-~~~~----~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~------- 214 (256)
+++++|+..+.+++||+||...|+ .|.| +++. .+..+..|++||||+|||.+..|.+.++..++.|+
T Consensus 174 v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~~~~~ 253 (389)
T TIGR00495 174 VAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYKRDPS 253 (389)
T ss_pred HHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEEECCC
Confidence 999999999999999999999998 7764 4433 12356899999999999999999999987655555
Q ss_pred -------------------------------------------------------EEecCCCceeEEEEEEEEcCCCeEE
Q psy3761 215 -------------------------------------------------------IKTKDRSLSAQWEHTVLVTKNGFEV 239 (256)
Q Consensus 215 -------------------------------------------------------~~~~~~~~~~~~edtv~Vt~~G~e~ 239 (256)
+.++++.+.+++++||+|+++|+++
T Consensus 254 ~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~g~~~ 333 (389)
T TIGR00495 254 KTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPNGPMR 333 (389)
T ss_pred CCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCCCcEE
Confidence 4667799999999999999999999
Q ss_pred cCCC--CCCCCCCC
Q psy3761 240 LTIS--PNMPYPSK 251 (256)
Q Consensus 240 Lt~~--~~~l~~~~ 251 (256)
||.. +.+++.|.
T Consensus 334 ~t~~~~~~~~~~s~ 347 (389)
T TIGR00495 334 ITSGEFEPDLYKSE 347 (389)
T ss_pred eCCCCCCHhhcCCC
Confidence 9995 44555554
No 28
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.4e-41 Score=289.05 Aligned_cols=223 Identities=30% Similarity=0.509 Sum_probs=195.9
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCC---
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGN--- 77 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~--- 77 (256)
||+|+++++++++++.+.++||+||.||++.+++.+.+ .|..+. ||+ ++|.|+..+|+.|+.
T Consensus 4 ~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~-~G~~~a------------fp~--~is~n~~~~H~~p~~~d~ 68 (291)
T cd01088 4 YREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRE-LGAGPA------------FPV--NLSINECAAHYTPNAGDD 68 (291)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH-cCCCCC------------CCc--eeccCCEeeCCCCCCCCC
Confidence 68999999999999999999999999999999999998 886542 774 467888999999864
Q ss_pred cccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee
Q psy3761 78 KILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV 157 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~ 157 (256)
++|++||+|++|+|++++||++|++||+++|+ +++++++++.+|++++++.+|||++++||+++++++++++|+..+
T Consensus 69 ~~l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~ 145 (291)
T cd01088 69 TVLKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI 145 (291)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe
Confidence 89999999999999999999999999999985 788999999999999999999999999999999999999999988
Q ss_pred cCccccccCc-cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEE----------------------------
Q psy3761 158 REFCGHGIGK-NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKE---------------------------- 208 (256)
Q Consensus 158 ~~~~GHgiG~-~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~---------------------------- 208 (256)
.+++|||||. ..|+.|.++++. .+++.+|+|||||+|||.+..|.|.++.
T Consensus 146 ~~~~GHgig~~~~h~~~~ip~~~-~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~ 224 (291)
T cd01088 146 RNLTGHSIERYRLHAGKSIPNVK-GGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIY 224 (291)
T ss_pred ecCCccCccCccccCCCccCccC-CCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 8999999994 789887665432 3568899999999999999888888762
Q ss_pred ------------ccCC----ce-----------------EEecCCCceeEEEEEEEEcCCCeEEcCC
Q psy3761 209 ------------MSDG----WT-----------------IKTKDRSLSAQWEHTVLVTKNGFEVLTI 242 (256)
Q Consensus 209 ------------~~~~----~~-----------------~~~~~~~~~~~~edtv~Vt~~G~e~Lt~ 242 (256)
+++. +. +.++++.+.+++|+||+|+++|++++|.
T Consensus 225 ~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 225 ENFGTLPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred HHCCCCCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 0110 00 4667899999999999999999999984
No 29
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=2.4e-41 Score=280.27 Aligned_cols=211 Identities=26% Similarity=0.370 Sum_probs=174.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCC---CCCCCCCCCCCCCCeeeeecCCeeeccCC--
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAP---LNYCPQKGGIPFPKSICTSVNDVVCHGIP-- 75 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~---~~~~g~~~~~~~~~~v~~g~~~~~~h~~p-- 75 (256)
||+|++|++++++++.+.++||+||.||++.++..+.+ ....... .+..+ .+|+++++ .|+..+|+.|
T Consensus 4 ~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~-~~~~~~~~~~~g~~g----~~~~~~v~--~n~~~~H~~p~~ 76 (228)
T cd01089 4 YKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILE-ELGKVYKKEKKLEKG----IAFPTCIS--VNNCVCHFSPLK 76 (228)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH-hhcccccCcccccCC----CCcCeEec--cCceeecCCCCC
Confidence 69999999999999999999999999999888777766 3221111 11122 45775554 6888999985
Q ss_pred --CCcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCH-----HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHH
Q psy3761 76 --GNKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSL-----VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKH 148 (256)
Q Consensus 76 --~~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~-----~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~ 148 (256)
++++|++||+|++|+|+.|+||++|++|||++|++++ +++++++++.++++++++.+|||++++||+++++++
T Consensus 77 ~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~ 156 (228)
T cd01089 77 SDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKV 156 (228)
T ss_pred CCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 6789999999999999999999999999999999875 899999999999999999999999999999999999
Q ss_pred HHhcCCeeecCccccccCcc--ccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEE
Q psy3761 149 AEKYGYSVVREFCGHGIGKN--FHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQW 226 (256)
Q Consensus 149 ~~~~G~~~~~~~~GHgiG~~--~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 226 (256)
++++|+..+..+++|++|.. .++.+. .-..+|++||||++||.++.+ +.+++++
T Consensus 157 ~~~~G~~~~~~~~~h~~g~~~~~~~~~~-------~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~ 212 (228)
T cd01089 157 IVDYGCTPVEGVLSHQLKRVVSSGEGKA-------KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQF 212 (228)
T ss_pred HHHcCCEEecCccccCcCceEecCCCCc-------cchhhccCCcccccceeEccC-----------------CCeEEEE
Confidence 99999877667777766662 222221 125789999999999999862 2337899
Q ss_pred EEEEEEcCCCeEEcCC
Q psy3761 227 EHTVLVTKNGFEVLTI 242 (256)
Q Consensus 227 edtv~Vt~~G~e~Lt~ 242 (256)
||||+||++|+|.||.
T Consensus 213 ~~Tv~vt~~G~e~lt~ 228 (228)
T cd01089 213 KLTVLLTPNGVTVLTG 228 (228)
T ss_pred EEEEEEcCCCCeeCCC
Confidence 9999999999999984
No 30
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=9.8e-41 Score=285.50 Aligned_cols=223 Identities=29% Similarity=0.505 Sum_probs=194.2
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC---C
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG---N 77 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~---~ 77 (256)
||+|++|++++++++.+.++||+||.||++.+++.+.+ .|+.+. ||+.++ .|+..+|+.|. +
T Consensus 8 ~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~-~g~~~a------------Fp~~vs--~n~~~~H~~p~~~d~ 72 (295)
T TIGR00501 8 WIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRE-LGAEPA------------FPCNIS--INECAAHFTPKAGDK 72 (295)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHH-cCCCCC------------CCccee--cCCEeeCCCCCCCcC
Confidence 68999999999999999999999999999999999998 887753 886654 67888999885 5
Q ss_pred cccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee
Q psy3761 78 KILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV 157 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~ 157 (256)
++|++||+|++|+|+.++||++|++||+++|+ .++++++++.+|++++++.+|||++++||+++++++++++|+..+
T Consensus 73 ~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i 149 (295)
T TIGR00501 73 TVFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI 149 (295)
T ss_pred ccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee
Confidence 78999999999999999999999999999985 368999999999999999999999999999999999999999988
Q ss_pred cCccccccC-ccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEcc--------------------------
Q psy3761 158 REFCGHGIG-KNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMS-------------------------- 210 (256)
Q Consensus 158 ~~~~GHgiG-~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~-------------------------- 210 (256)
.+++|||+| +.+|+.+.+++. .++++.+|++||||+|||.+..|.|.++..+
T Consensus 150 ~~~~GHgig~~~~h~g~~ip~i-~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~ 228 (295)
T TIGR00501 150 SNLTGHSMAPYRLHGGKSIPNV-KERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTID 228 (295)
T ss_pred cCCCCcceecccccCCCccCee-cCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHH
Confidence 899999999 477887555432 2567889999999999999888888776310
Q ss_pred ---------CCce--------------------------EEecCCCceeEEEEEEEEcCCCeEEcCC
Q psy3761 211 ---------DGWT--------------------------IKTKDRSLSAQWEHTVLVTKNGFEVLTI 242 (256)
Q Consensus 211 ---------~~~~--------------------------~~~~~~~~~~~~edtv~Vt~~G~e~Lt~ 242 (256)
..|. +.++++.+.+++|+|++|+++|++++|.
T Consensus 229 ~~~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 229 ENYGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred HHCCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 0000 4667889999999999999999999984
No 31
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=7.7e-40 Score=290.27 Aligned_cols=228 Identities=26% Similarity=0.360 Sum_probs=194.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHh---cCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC-
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNI---QNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG- 76 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~---~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~- 76 (256)
||+|++|++++++.+.+.++||||+.||++.++..+++. .|... ..+||+ ++|.|+..+|+.|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----------g~aFPt--~vS~N~~aaH~tP~~ 228 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----------GWAFPT--GCSLNHCAAHYTPNT 228 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----------cCCCCc--eeecCccccCCCCCC
Confidence 689999999999999999999999999999998877651 23321 144886 56789999999996
Q ss_pred --CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCC
Q psy3761 77 --NKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGY 154 (256)
Q Consensus 77 --~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~ 154 (256)
+++|++||+|+||+|++++||++|++||+++| ++++++++++.+|++++++.++||++++||.++++++++++|+
T Consensus 229 gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~ 305 (470)
T PTZ00053 229 GDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEV 305 (470)
T ss_pred CCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999997 6889999999999999999999999999999999999999997
Q ss_pred e---------eecCccccccCc-cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEc---------cC----
Q psy3761 155 S---------VVREFCGHGIGK-NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEM---------SD---- 211 (256)
Q Consensus 155 ~---------~~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~---------~~---- 211 (256)
. .+.+++|||||+ .+|+.|.++++. +++..+|++||||+|||.+..|.|.++.- .+
T Consensus 306 e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~-~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~ 384 (470)
T PTZ00053 306 EIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVK-GGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFV 384 (470)
T ss_pred cccCcccccccccCCcccCCCCccccCCCcCCeeC-CCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcC
Confidence 4 247999999997 899966554432 56788999999999999999988887730 00
Q ss_pred -------------------------Cce--------------------------EEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 212 -------------------------GWT--------------------------IKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 212 -------------------------~~~--------------------------~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+|. +.++++.+.+++|+||+++++|.|++
T Consensus 385 ~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vi 464 (470)
T PTZ00053 385 PLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVL 464 (470)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEec
Confidence 000 35567899999999999999999999
Q ss_pred CCCC
Q psy3761 241 TISP 244 (256)
Q Consensus 241 t~~~ 244 (256)
|.-+
T Consensus 465 s~g~ 468 (470)
T PTZ00053 465 SRGD 468 (470)
T ss_pred CCCC
Confidence 9753
No 32
>KOG2414|consensus
Probab=100.00 E-value=9e-39 Score=270.90 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=199.8
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
||+|+.|+.+++...+-.-|+...|..+.+.++..++. +|++. .+|||+|+.|.|+...||.-.+..+
T Consensus 237 Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~-rGad~-----------~AYpPVVAgG~na~tIHY~~Nnq~l 304 (488)
T KOG2414|consen 237 MREACNIASQTFSETMFGSRDFHNEAALSALLEYECRR-RGADR-----------LAYPPVVAGGKNANTIHYVRNNQLL 304 (488)
T ss_pred HHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheee-cCccc-----------cccCCeeecCcccceEEEeeccccc
Confidence 79999999999999999999999999999999999998 88875 4599999999999999999999999
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcC--CCchhhHHHHHHHHH----HhcC
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYV-GEPSLVAKRLSDISFECMWIGIVKIKP--GIHLGDIGYAIQKHA----EKYG 153 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kp--G~~~~ev~~~~~~~~----~~~G 153 (256)
+++|+|++|.|+.++||++|++|||.+ |+.++.|+++|++++..++..+..++| |.+..+|+....+.+ ++.|
T Consensus 305 ~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lG 384 (488)
T KOG2414|consen 305 KDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELG 384 (488)
T ss_pred CCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999 999999999999999999999999999 999999998876554 4445
Q ss_pred Ce------------eecCccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCC
Q psy3761 154 YS------------VVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRS 221 (256)
Q Consensus 154 ~~------------~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~ 221 (256)
+. .++|+.||-+|+++|+-|.++ .+..|+|||||+|||++|.+ ..|.++.+..+
T Consensus 385 I~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~------r~~pL~pg~ViTIEPGvYIP--------~d~d~P~~FrG 450 (488)
T KOG2414|consen 385 IRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVS------RDIPLQPGMVITIEPGVYIP--------EDDDPPEEFRG 450 (488)
T ss_pred cccchHHHHHhhhhcCCcccchhcCcccccCCCCC------CCccCCCCceEEecCceecC--------ccCCCchHhcC
Confidence 42 257999999999999999874 46789999999999999985 34556677788
Q ss_pred ceeEEEEEEEEcCCCeEEcCC-CCCCC
Q psy3761 222 LSAQWEHTVLVTKNGFEVLTI-SPNMP 247 (256)
Q Consensus 222 ~~~~~edtv~Vt~~G~e~Lt~-~~~~l 247 (256)
.|+|+||.|+|+++|.|+||. .|+++
T Consensus 451 IGiRIEDDV~i~edg~evLT~a~pKei 477 (488)
T KOG2414|consen 451 IGIRIEDDVAIGEDGPEVLTAACPKEI 477 (488)
T ss_pred ceEEeecceEeccCCceeehhcccCCH
Confidence 999999999999999999995 77765
No 33
>KOG2737|consensus
Probab=100.00 E-value=5.3e-36 Score=251.79 Aligned_cols=236 Identities=22% Similarity=0.258 Sum_probs=190.1
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeecc----CCC
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHG----IPG 76 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~----~p~ 76 (256)
||.|++|++++..++++.++||+.|.|+.+.+...... .|.-.. .+|..|.++|.|+.+.|+ .|+
T Consensus 194 iRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~-~GGcRh----------~sYtcIc~sG~ns~vLHYgha~apN 262 (492)
T KOG2737|consen 194 IRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYS-YGGCRH----------LSYTCICASGDNSAVLHYGHAGAPN 262 (492)
T ss_pred HHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhc-cCCccc----------cccceeeecCCCcceeeccccCCCC
Confidence 68999999999999999999999999999999988888 665321 448889999999999998 789
Q ss_pred CcccCCCCEEEEeEEEEeCcEEEEEEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHh----
Q psy3761 77 NKILKKGDILNIDITVIKNGYYGDTSRMFYV-GEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEK---- 151 (256)
Q Consensus 77 ~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~---- 151 (256)
++.||+||+.++|.|+.|..|.+|+|++|.. |+.+++|+.+|+++++++.++++++|||+..-|++..+.+++-+
T Consensus 263 d~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La~kvlle~laq 342 (492)
T KOG2737|consen 263 DRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEKVLLEHLAQ 342 (492)
T ss_pred CcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 89999999999999999999999999999999999877765433
Q ss_pred cCC---------------eeecCccccccCccccCCC-cccccCCC--------CCCCeecCCCEEEEeeEEEcCCCceE
Q psy3761 152 YGY---------------SVVREFCGHGIGKNFHEEP-RVMNYGIP--------GTLEKLKTGMIFTVEPMINEGRKEIK 207 (256)
Q Consensus 152 ~G~---------------~~~~~~~GHgiG~~~~e~p-~i~~~~~~--------~~~~~l~~gmv~~iep~~~~~~~~v~ 207 (256)
.|. ...+|.+||-+|+++|+-. +..+..+| .....|++|||+++||+.|+-.+-..
T Consensus 343 ~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~Ll~ 422 (492)
T KOG2737|consen 343 MGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFLLD 422 (492)
T ss_pred cCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHHHHH
Confidence 332 2247889999999999731 11111111 24578999999999999996211110
Q ss_pred E-ccCCce-------EEec-CCCceeEEEEEEEEcCCCeEEcCCCCCCC
Q psy3761 208 E-MSDGWT-------IKTK-DRSLSAQWEHTVLVTKNGFEVLTISPNMP 247 (256)
Q Consensus 208 ~-~~~~~~-------~~~~-~~~~~~~~edtv~Vt~~G~e~Lt~~~~~l 247 (256)
. +.+.-. +.+. .+..|+|+||.|+||++|+|.||..|+..
T Consensus 423 ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~vprtv 471 (492)
T KOG2737|consen 423 EALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTCVPRTV 471 (492)
T ss_pred HHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccCCCCCH
Confidence 0 001000 0111 25669999999999999999999999875
No 34
>KOG2413|consensus
Probab=99.94 E-value=1.5e-25 Score=199.21 Aligned_cols=206 Identities=21% Similarity=0.271 Sum_probs=170.7
Q ss_pred hHHHHHHHHHHHHHhhcCCCC--CCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeee-ecCCeeeccCCC--
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPG--VTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICT-SVNDVVCHGIPG-- 76 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG--~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~-g~~~~~~h~~p~-- 76 (256)
|.|++|++. +...-+.+..| +||.+++..+++.-.+ +.. |.| .+|++|.++ |+|.+++|+.|.
T Consensus 322 rD~~Alve~-~~wle~~~~~g~~itE~~~A~kle~fR~~-~~~------fmg----lSFeTIS~s~G~NgAviHYsP~~e 389 (606)
T KOG2413|consen 322 RDGAALVEY-FAWLEKELHKGYTITEYDAADKLEEFRSR-QDH------FMG----LSFETISSSVGPNGAVIHYSPPAE 389 (606)
T ss_pred hhHHHHHHH-HHHHhhhhhcCcccchhhHHHHHHHHHHh-hcc------ccC----cCcceeeccCCCCceeeecCCCcc
Confidence 455555543 33444556677 8999999998886555 221 222 669999866 999999999987
Q ss_pred -CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCchhhHHHHHHHHHHhcCC
Q psy3761 77 -NKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKP-GIHLGDIGYAIQKHAEKYGY 154 (256)
Q Consensus 77 -~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~ev~~~~~~~~~~~G~ 154 (256)
++++.+..+.++|.|++|..-.+|+|||+.+|+||+++++.|..++..+.++.+++.| |.....++..++..+++.|.
T Consensus 390 ~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gL 469 (606)
T KOG2413|consen 390 TNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGL 469 (606)
T ss_pred ccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhcc
Confidence 4699999999999999999999999999999999999999999999999999999888 78899999999999999998
Q ss_pred eeecCccccccCc--cccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEE
Q psy3761 155 SVVREFCGHGIGK--NFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLV 232 (256)
Q Consensus 155 ~~~~~~~GHgiG~--~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~V 232 (256)
.. .|.+|||+|- .+||.|....+..-.++..|++||++++||+.|. ++.||+|+|+.++|
T Consensus 470 Dy-~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~-----------------dg~fGIRienv~~v 531 (606)
T KOG2413|consen 470 DY-GHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK-----------------DGEFGIRIENVVEV 531 (606)
T ss_pred cc-CCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc-----------------cCcceEEEeeEEEE
Confidence 76 7999999996 6899996544443457788999999999999996 44568899999998
Q ss_pred cCCCe
Q psy3761 233 TKNGF 237 (256)
Q Consensus 233 t~~G~ 237 (256)
.+.+.
T Consensus 532 vd~~~ 536 (606)
T KOG2413|consen 532 VDAGT 536 (606)
T ss_pred Eeccc
Confidence 76553
No 35
>KOG1189|consensus
Probab=99.92 E-value=3.6e-24 Score=193.45 Aligned_cols=228 Identities=21% Similarity=0.267 Sum_probs=178.5
Q ss_pred ChHHHHHHHHHHHHHhh-----cCCCC--CCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeec-
Q psy3761 1 MRIAGKLSAEVLDYIAP-----FIKPG--VTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCH- 72 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~-----~i~pG--~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h- 72 (256)
||+|++++...|...+. .+-.+ +|...|...++..+.. .-..+ +.......+.|+|++.+|.+..+..
T Consensus 146 irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~-~k~s~---~l~~~~~d~cY~PIiqSGg~ydlk~s 221 (960)
T KOG1189|consen 146 IRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIED-KKYSP---GLDPDLLDMCYPPIIQSGGKYDLKPS 221 (960)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhc-cccCc---ccCccccccccChhhhcCCccccccc
Confidence 58899999999984333 34455 5777788777777755 22221 1111223466999999999865433
Q ss_pred cCCCCcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhc
Q psy3761 73 GIPGNKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKY 152 (256)
Q Consensus 73 ~~p~~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~ 152 (256)
..+++..| + +|+..+|++|++||++++|||++ .|+.++++.|+.++.++++++..+|||+..++||.++.+++++.
T Consensus 222 a~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~ 297 (960)
T KOG1189|consen 222 AVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN 297 (960)
T ss_pred cccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc
Confidence 33556667 4 89999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred CCeeec---CccccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEc-CCCceEEccCCceEEecCCCceeEEEE
Q psy3761 153 GYSVVR---EFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINE-GRKEIKEMSDGWTIKTKDRSLSAQWEH 228 (256)
Q Consensus 153 G~~~~~---~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~ed 228 (256)
+....+ .-+|.|||+++.|..++.+ ..++.+|++||||.|..++.. .. ....+.+.+.+.|
T Consensus 298 ~Pel~~~~~k~lG~~iGlEFREssl~in---aKnd~~lk~gmvFni~lGf~nl~n------------~~~~~~yaL~l~D 362 (960)
T KOG1189|consen 298 KPELVPNFTKNLGFGIGLEFRESSLVIN---AKNDRVLKKGMVFNISLGFSNLTN------------PESKNSYALLLSD 362 (960)
T ss_pred Ccchhhhhhhhcccccceeeeccccccc---ccchhhhccCcEEEEeeccccccC------------cccccchhhhccc
Confidence 987643 3489999999999987655 678899999999999887764 11 0112348899999
Q ss_pred EEEEcCCCe-EEcCCCCCCCCCCC
Q psy3761 229 TVLVTKNGF-EVLTISPNMPYPSK 251 (256)
Q Consensus 229 tv~Vt~~G~-e~Lt~~~~~l~~~~ 251 (256)
||+|+++++ ++||..++..-...
T Consensus 363 Tvlv~e~~p~~vLT~~~K~~~dv~ 386 (960)
T KOG1189|consen 363 TVLVGEDPPAEVLTDSAKAVKDVS 386 (960)
T ss_pred eeeecCCCcchhhcccchhhcccc
Confidence 999999996 99999877654333
No 36
>KOG2775|consensus
Probab=99.85 E-value=4.7e-20 Score=151.47 Aligned_cols=228 Identities=27% Similarity=0.379 Sum_probs=186.2
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH---hcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCC-
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVN---IQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPG- 76 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~---~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~- 76 (256)
+|+|+++..++-+.+.+.|+||||..||+..++...++ +.|... +++|| ...+.|.+..|++|+
T Consensus 88 ~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a----------Gi~FP--tG~SlN~cAAHyTpNa 155 (397)
T KOG2775|consen 88 LRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA----------GIGFP--TGCSLNHCAAHYTPNA 155 (397)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc----------cccCC--CcccccchhhhcCCCC
Confidence 48999999999999999999999999999998876654 133322 25588 456788899999986
Q ss_pred --CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCC
Q psy3761 77 --NKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGY 154 (256)
Q Consensus 77 --~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~ 154 (256)
..+|+..|+.+||+|.+.+|--.|.+.|+.| .+....++.++.+|...++...---++..||-++++++++++-.
T Consensus 156 Gd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEv 232 (397)
T KOG2775|consen 156 GDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEV 232 (397)
T ss_pred CCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEE
Confidence 4689999999999999999999999999999 46677899999999999999999999999999999999999754
Q ss_pred e---------eecCccccccCcc-ccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEE----------------
Q psy3761 155 S---------VVREFCGHGIGKN-FHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKE---------------- 208 (256)
Q Consensus 155 ~---------~~~~~~GHgiG~~-~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~---------------- 208 (256)
. +++++.||+|+.. +|-.-.++. ...+..+.+++|..++||..-+.|.|.|..
T Consensus 233 Ei~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPi-Vkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~v 311 (397)
T KOG2775|consen 233 EINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPI-VKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGHV 311 (397)
T ss_pred EeCCceecceeccccCCCcccceEeecCcccce-ecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhcccccc
Confidence 3 2478899999984 665543321 225688999999999999888878777651
Q ss_pred -------------ccCCce-----------------------------------EEecCCCceeEEEEEEEEcCCCeEEc
Q psy3761 209 -------------MSDGWT-----------------------------------IKTKDRSLSAQWEHTVLVTKNGFEVL 240 (256)
Q Consensus 209 -------------~~~~~~-----------------------------------~~~~~~~~~~~~edtv~Vt~~G~e~L 240 (256)
+...|+ +++-++.+.+++|+||+..+.+.|++
T Consensus 312 plrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEVv 391 (397)
T KOG2775|consen 312 PLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEVV 391 (397)
T ss_pred ccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcchh
Confidence 011111 45667899999999999999999999
Q ss_pred CCCC
Q psy3761 241 TISP 244 (256)
Q Consensus 241 t~~~ 244 (256)
|...
T Consensus 392 srGD 395 (397)
T KOG2775|consen 392 SRGD 395 (397)
T ss_pred cccC
Confidence 9743
No 37
>KOG2776|consensus
Probab=99.80 E-value=8.8e-18 Score=141.34 Aligned_cols=239 Identities=25% Similarity=0.323 Sum_probs=186.4
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCC--CCCCCCCCCCCCCCeeeeecCCeeeccCCC---
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAP--LNYCPQKGGIPFPKSICTSVNDVVCHGIPG--- 76 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~--~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~--- 76 (256)
|-|++|+..+++.+.+.++||.+..||+......+.++.|...-. ....| ++|| .|.+.|++.+|+.|-
T Consensus 25 k~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KG----IAfP--T~Isvnncv~h~sPlksd 98 (398)
T KOG2776|consen 25 KMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKG----IAFP--TSISVNNCVCHFSPLKSD 98 (398)
T ss_pred hhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhcc----cccc--ceecccceeeccCcCCCC
Confidence 679999999999999999999999999998888887744432210 11234 7788 577899999998874
Q ss_pred -CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCC-----CHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHH
Q psy3761 77 -NKILKKGDILNIDITVIKNGYYGDTSRMFYVGEP-----SLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAE 150 (256)
Q Consensus 77 -~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~-----~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~ 150 (256)
+..|++||+|+||+|++++||.+.++.|++|+.+ +....++..+++.|.+++++.+|||.+-..|-+++.+...
T Consensus 99 ~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aa 178 (398)
T KOG2776|consen 99 ADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAA 178 (398)
T ss_pred CcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHH
Confidence 5789999999999999999999999999999854 4677889999999999999999999999999999999999
Q ss_pred hcCCeeecCccccccCccccCC-C-cccccCC----CCCCCeecCCCEEEEeeEEEcCCCceEEccCC-ce---------
Q psy3761 151 KYGYSVVREFCGHGIGKNFHEE-P-RVMNYGI----PGTLEKLKTGMIFTVEPMINEGRKEIKEMSDG-WT--------- 214 (256)
Q Consensus 151 ~~G~~~~~~~~GHgiG~~~~e~-p-~i~~~~~----~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~-~~--------- 214 (256)
++++..+.+..-|..=..+-+. + .+.+... .-.+..++++.|+++...+..+.+..+..++. -+
T Consensus 179 s~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~y~kd~~~~ 258 (398)
T KOG2776|consen 179 SYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTIYYKDESVS 258 (398)
T ss_pred HhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCcccccccccceeEEeccchH
Confidence 9998876566666544333221 2 2222111 12467899999999998887765544421111 00
Q ss_pred -----------------------------------------------------EEecCCCceeEEEEEEEEcCCCeEEcC
Q psy3761 215 -----------------------------------------------------IKTKDRSLSAQWEHTVLVTKNGFEVLT 241 (256)
Q Consensus 215 -----------------------------------------------------~~~~~~~~~~~~edtv~Vt~~G~e~Lt 241 (256)
.+++++.+.+++.-|+++.++|.-.||
T Consensus 259 y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~TvllmPng~~~l~ 338 (398)
T KOG2776|consen 259 YMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLMPNGSLRLT 338 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEeccCCCcccc
Confidence 467789999999999999999999999
Q ss_pred CCCCC
Q psy3761 242 ISPNM 246 (256)
Q Consensus 242 ~~~~~ 246 (256)
..|.+
T Consensus 339 ~~p~~ 343 (398)
T KOG2776|consen 339 GSPFK 343 (398)
T ss_pred CCCCC
Confidence 85553
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.70 E-value=1.4e-16 Score=142.23 Aligned_cols=175 Identities=18% Similarity=0.185 Sum_probs=141.0
Q ss_pred CCCCCeeeeecCCee-eccCCCCcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q psy3761 56 IPFPKSICTSVNDVV-CHGIPGNKILKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKP 134 (256)
Q Consensus 56 ~~~~~~v~~g~~~~~-~h~~p~~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp 134 (256)
+.|.|++.+|..--+ |.....+..+ .||+|...+|.+|+|||++++||+++ .|+.+|++-|+.+..++..++..+||
T Consensus 243 w~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~rp 320 (1001)
T COG5406 243 WCYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLVRP 320 (1001)
T ss_pred hhcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhcCC
Confidence 448888998876432 2222334443 47899999999999999999999999 88999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHhcCCeeecCc---cccccCccccCCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccC
Q psy3761 135 GIHLGDIGYAIQKHAEKYGYSVVREF---CGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSD 211 (256)
Q Consensus 135 G~~~~ev~~~~~~~~~~~G~~~~~~~---~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~ 211 (256)
|...++||..+.+++++.|....+++ .|-+||++..+.-.+.+ -.++.+|+.||+|.+.-++..-. +
T Consensus 321 G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~n---vkn~r~lq~g~~fnis~gf~nl~-------~ 390 (1001)
T COG5406 321 GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFN---VKNGRVLQAGCIFNISLGFGNLI-------N 390 (1001)
T ss_pred CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcccccccccccee---ccCCceeccccEEEEeecccccC-------C
Confidence 99999999999999999998765444 79999999988765544 45679999999999987665300 0
Q ss_pred CceEEecCCCceeEEEEEEEEcCCCeEEcCCCCCC
Q psy3761 212 GWTIKTKDRSLSAQWEHTVLVTKNGFEVLTISPNM 246 (256)
Q Consensus 212 ~~~~~~~~~~~~~~~edtv~Vt~~G~e~Lt~~~~~ 246 (256)
. ...+.|.+.+-||+-|+-+-+.++|..|+.
T Consensus 391 ~----~~~Nnyal~l~dt~qi~ls~p~~~t~~~ka 421 (1001)
T COG5406 391 P----HPKNNYALLLIDTEQISLSNPIVFTDSPKA 421 (1001)
T ss_pred C----CcccchhhhhccceEeecCCceecccCccc
Confidence 0 012457888999999998889999988874
No 39
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.72 E-value=0.00036 Score=62.28 Aligned_cols=117 Identities=19% Similarity=0.229 Sum_probs=79.2
Q ss_pred cEEEEEEEEEEeCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee-cCcccc--ccCcccc
Q psy3761 96 GYYGDTSRMFYVGEPS--LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV-REFCGH--GIGKNFH 170 (256)
Q Consensus 96 gy~~d~~Rt~~vG~~~--~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~-~~~~GH--giG~~~~ 170 (256)
..++++.|+..+..+. +.++++-+.+.++++++.+.+|||++-.||..++.+.+.+.|.... .++.++ ++.....
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N 205 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVN 205 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccc
Confidence 3456777888886655 5667888888999999999999999999999999999888774321 111111 1111111
Q ss_pred CCCcccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 171 EEPRVMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 171 e~p~i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
+ .+.+ +.+ ++.+|++|+++.++.+.+.. | |-.-+..|++|++
T Consensus 206 ~--~i~H-gip-~~r~L~~GDiV~iDvg~~~~---------G---------Y~aD~tRT~~VG~ 247 (396)
T PLN03158 206 E--VICH-GIP-DARKLEDGDIVNVDVTVYYK---------G---------CHGDLNETFFVGN 247 (396)
T ss_pred c--cccC-CCC-CCccCCCCCEEEEEEeEEEC---------C---------EEEeEEeEEEcCC
Confidence 1 1212 112 46689999999999998762 2 1245888999864
No 40
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.70 E-value=0.00069 Score=56.34 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeec-Ccccc--ccCccccCCCcccccCCCCCCCeec
Q psy3761 112 LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVR-EFCGH--GIGKNFHEEPRVMNYGIPGTLEKLK 188 (256)
Q Consensus 112 ~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~-~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~ 188 (256)
+.++++.+.+.++++++.+.++||++-.||..++++.+.+.|..... ...++ .+...... .+++. ..++.+|+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~h~--~~~~~~l~ 77 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNE--VVCHG--IPDDRVLK 77 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCC--ceeCC--CCCCcccC
Confidence 35789999999999999999999999999999999999999975321 11111 01111011 11111 12467899
Q ss_pred CCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 189 TGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 189 ~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
+|+++.++.+...+ | +...++.|+.+++
T Consensus 78 ~Gd~v~id~g~~~~---------G---------Y~ad~~RT~~~G~ 105 (238)
T cd01086 78 DGDIVNIDVGVELD---------G---------YHGDSARTFIVGE 105 (238)
T ss_pred CCCEEEEEEEEEEC---------C---------EEEEEEEEEECCC
Confidence 99999999887642 1 2356899999864
No 41
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=97.68 E-value=0.00073 Score=56.43 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecCc--cccccCccccCCCcccccCCCCCCCeecC
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VREF--CGHGIGKNFHEEPRVMNYGIPGTLEKLKT 189 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~--~GHgiG~~~~e~p~i~~~~~~~~~~~l~~ 189 (256)
.++++=+.+.++++.+.+.++||++..||++.+++++++.|.-+ +.+. +...+.+++.|- +.++ .|+++.+|++
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~--v~Hg-iP~d~~vlk~ 89 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEV--VAHG-IPGDKKVLKE 89 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhhe--eeec-CCCCCcccCC
Confidence 44566667778888888999999999999999999999977654 1222 234455554443 2222 2458899999
Q ss_pred CCEEEEeeEEEc
Q psy3761 190 GMIFTVEPMINE 201 (256)
Q Consensus 190 gmv~~iep~~~~ 201 (256)
|.++.|..++..
T Consensus 90 GDiv~IDvg~~~ 101 (255)
T COG0024 90 GDIVKIDVGAHI 101 (255)
T ss_pred CCEEEEEEEEEE
Confidence 999999999886
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=97.49 E-value=0.0019 Score=54.13 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeec-CccccccCccccCCCcccccCCCCCCCeecCCC
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVR-EFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGM 191 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~-~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gm 191 (256)
.++++.+.+.++++++.+.++||++-.||..+++..+.+.|..... +..++..-........+.+. ..++.+|++|+
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~--~~~~~~l~~Gd 90 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHG--IPSDKVLKEGD 90 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecC--CCCCcccCCCC
Confidence 4567888889999999999999999999999999999998875311 11111100000000011111 12567999999
Q ss_pred EEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEc
Q psy3761 192 IFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVT 233 (256)
Q Consensus 192 v~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt 233 (256)
++.++.+...+. +..-+.-|+.|.
T Consensus 91 ~v~id~g~~~~g------------------Y~~d~~RT~~vG 114 (252)
T PRK05716 91 IVNIDVTVIKDG------------------YHGDTSRTFGVG 114 (252)
T ss_pred EEEEEEEEEECC------------------EEEEeEEEEECC
Confidence 999998886521 234578888874
No 43
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.46 E-value=0.0019 Score=55.49 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCccccccCccccCCCcccccCC-CCCCCeecCC
Q psy3761 112 LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREFCGHGIGKNFHEEPRVMNYGI-PGTLEKLKTG 190 (256)
Q Consensus 112 ~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~i~~~~~-~~~~~~l~~g 190 (256)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|... ++.+++...+. ..++.. .+++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~-----afp~~is~n~~--~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP-----AFPVNLSINEC--AAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCceeccCCE--eeCCCCCCCCCcccCCC
Confidence 357889999999999999999999999999999999999988542 22222222221 112111 3456789999
Q ss_pred CEEEEeeEEEc
Q psy3761 191 MIFTVEPMINE 201 (256)
Q Consensus 191 mv~~iep~~~~ 201 (256)
+++.++.+...
T Consensus 75 DvV~iD~G~~~ 85 (291)
T cd01088 75 DVVKLDFGAHV 85 (291)
T ss_pred CEEEEEEEEEE
Confidence 99999998865
No 44
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.46 E-value=0.0018 Score=54.38 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=65.1
Q ss_pred EEEEEEeCCCCH--HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeec-Cccccc--cCccccCCCcc
Q psy3761 101 TSRMFYVGEPSL--VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVR-EFCGHG--IGKNFHEEPRV 175 (256)
Q Consensus 101 ~~Rt~~vG~~~~--~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~-~~~GHg--iG~~~~e~p~i 175 (256)
-.|++.+..+.+ .++++.+.+.++++++.+.++||++-.||...+...+.+.|..... ...++. +...... .+
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~--~~ 81 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNE--EV 81 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCC--ee
Confidence 368888854433 4567888888889899999999999999999999999999876421 111111 1111111 11
Q ss_pred cccCCCCCCCeecCCCEEEEeeEEEc
Q psy3761 176 MNYGIPGTLEKLKTGMIFTVEPMINE 201 (256)
Q Consensus 176 ~~~~~~~~~~~l~~gmv~~iep~~~~ 201 (256)
.++ .+ ++.+|++|+++.++.+...
T Consensus 82 ~h~-~p-~~~~l~~Gd~v~iD~g~~~ 105 (255)
T PRK12896 82 AHG-IP-GPRVIKDGDLVNIDVSAYL 105 (255)
T ss_pred Eec-CC-CCccCCCCCEEEEEEeEEE
Confidence 111 12 4578999999999988765
No 45
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.37 E-value=0.0031 Score=50.62 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCccc
Q psy3761 1 MRIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKIL 80 (256)
Q Consensus 1 lr~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l 80 (256)
+|++.+.+.++++.+.+.++||++-.||.+.+.+.+.+ .|....+....| + .+.............++.+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~-~g~~~~~~~~~G------h--~iG~~~~e~~~~~~~~~~~l 174 (207)
T cd01066 104 QRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEE-HGLGPNFGHRTG------H--GIGLEIHEPPVLKAGDDTVL 174 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-cCccccCCCCCc------c--ccCcccCCCCCcCCCCCCCc
Confidence 47889999999999999999999999999999999998 776321111111 1 12211111111111246789
Q ss_pred CCCCEEEEeEEEEeC-cEEEEEEEEEEeCC
Q psy3761 81 KKGDILNIDITVIKN-GYYGDTSRMFYVGE 109 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~-gy~~d~~Rt~~vG~ 109 (256)
++|.++.++.+.... ++..-+.-|+++.+
T Consensus 175 ~~gmv~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 175 EPGMVFAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred CCCCEEEECCEEEECCCcEEEeeeEEEEeC
Confidence 999999999998876 58899999999853
No 46
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.22 E-value=0.0053 Score=49.68 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccC-CCCccc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGI-PGNKIL 80 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~-p~~~~l 80 (256)
|++.+.+.++++.+++.++||++-.||.+.+.+.+.+ .|....+....| +. +....... |.-. .++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~-~g~~~~~~~~~G------h~--iG~~~~e~-p~i~~~~~~~l 175 (208)
T cd01092 106 KEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEE-AGYGEYFIHRTG------HG--VGLEVHEA-PYISPGSDDVL 175 (208)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCccccCCCCCc------cc--cCcccCcC-CCcCCCCCCCc
Confidence 6778888999999999999999999999999999988 886532211111 11 11111111 1111 246889
Q ss_pred CCCCEEEEeEEEEeCc-EEEEEEEEEEeC
Q psy3761 81 KKGDILNIDITVIKNG-YYGDTSRMFYVG 108 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~g-y~~d~~Rt~~vG 108 (256)
++|.++.|+.+....| +..-+.-|+++.
T Consensus 176 ~~gmv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 176 EEGMVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred CCCCEEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999999998876543 455678888884
No 47
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.88 E-value=0.02 Score=51.30 Aligned_cols=102 Identities=16% Similarity=0.085 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecC------ccccccCccccCCCcccccCC-CC-CC
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVRE------FCGHGIGKNFHEEPRVMNYGI-PG-TL 184 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~------~~GHgiG~~~~e~p~i~~~~~-~~-~~ 184 (256)
.++++-+.+..+++.+++.++||++..||.+.+.+.+++.+-..+.. .+++...+.+.+ .+.++.. ++ ++
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~--~v~H~~P~~~d~~ 98 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNN--CVGHFSPLKSDQD 98 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCC--eeeCCCCCCCCCC
Confidence 34566677778888889999999999999999999988865322111 112222222111 1222221 12 34
Q ss_pred CeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 185 EKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 185 ~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
.+|++|.++.|..+... +|| ..-+..|++|.+
T Consensus 99 ~~Lk~GDvVkIDlG~~i---------dGY---------~aD~arTv~vG~ 130 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHI---------DGF---------IALVAHTFVVGV 130 (389)
T ss_pred cCcCCCCEEEEEEEEEE---------CCE---------EEEEEEEEEECC
Confidence 78999999999999876 333 355889999974
No 48
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.84 E-value=0.019 Score=47.96 Aligned_cols=98 Identities=17% Similarity=0.148 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC--eeeccC--CCC
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND--VVCHGI--PGN 77 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~--~~~h~~--p~~ 77 (256)
|++.+.+.++++++++.++||++-.||...+.+.+.+ .|.... ..+.| +. +...... .++.+. .++
T Consensus 119 ~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~-~g~~~~-~~~~G------Hg--iG~~~~e~p~i~~~~~~~~~ 188 (247)
T TIGR00500 119 EKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEA-KGFSVV-REYCG------HG--IGRKFHEEPQIPNYGKKFTN 188 (247)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-cCCEec-cCccC------Cc--cCcccCCCCccCCcCcCCCC
Confidence 5677788889999999999999999999999999888 776542 12222 22 2221111 112111 236
Q ss_pred cccCCCCEEEEeEEEEe------------------CcEEEEEEEEEEeCC
Q psy3761 78 KILKKGDILNIDITVIK------------------NGYYGDTSRMFYVGE 109 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~------------------~gy~~d~~Rt~~vG~ 109 (256)
.+|++|.++.++.+... +.+..-+.-|++|.+
T Consensus 189 ~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 189 VRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 78999999999987654 346777888999853
No 49
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.83 E-value=0.021 Score=49.19 Aligned_cols=96 Identities=18% Similarity=0.188 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecCccccccCc-cccCCCcccccCCCCCCCeecCC
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VREFCGHGIGK-NFHEEPRVMNYGIPGTLEKLKTG 190 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~~l~~g 190 (256)
.++++-+.+.++++.+.+.++||++-.||.+.+++.+.+.|... ++..+. ++- ..|-.|. ++++.+|++|
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~aFp~~vs--~n~~~~H~~p~------~~d~~~l~~G 78 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPAFPCNIS--INECAAHFTPK------AGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCccee--cCCEeeCCCCC------CCcCccCCCC
Confidence 46777888888899999999999999999999999999988652 111110 110 1121221 3456789999
Q ss_pred CEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 191 MIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 191 mv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
+++.++.+... +|| .+-+..|+.+.+
T Consensus 79 DvV~iD~G~~~---------dGY---------~aD~arT~~vG~ 104 (295)
T TIGR00501 79 DVVKLDLGAHV---------DGY---------IADTAITVDLGD 104 (295)
T ss_pred CEEEEEEeEEE---------CCE---------EEEEEEEEEeCc
Confidence 99999988765 222 345777888754
No 50
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.78 E-value=0.025 Score=46.82 Aligned_cols=98 Identities=11% Similarity=0.087 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeecc------CC
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHG------IP 75 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~------~p 75 (256)
|++.+++..+++++++.+|||++-.||.+.+++.+.+ +|.......- +...+....+. .+|. ..
T Consensus 112 ~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~-~G~~~~~~~~--------~GHgiGl~~he-~~~~~g~~~~~~ 181 (228)
T cd01090 112 LKIWEANVAVHERGLELIKPGARCKDIAAELNEMYRE-HDLLRYRTFG--------YGHSFGVLSHY-YGREAGLELRED 181 (228)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCCcccccc--------cCccccccccc-CCCccccccCCC
Confidence 5677889999999999999999999999999999988 8865421110 11112221111 1111 12
Q ss_pred CCcccCCCCEEEEeEEEEeC----c-EEEEEEEEEEeCC
Q psy3761 76 GNKILKKGDILNIDITVIKN----G-YYGDTSRMFYVGE 109 (256)
Q Consensus 76 ~~~~l~~Gd~v~id~g~~~~----g-y~~d~~Rt~~vG~ 109 (256)
++.+|++|.++.++.+..+. | .-.-+..|++|.+
T Consensus 182 ~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 182 IDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 35889999999999987652 2 3445888988854
No 51
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.76 E-value=0.029 Score=48.19 Aligned_cols=82 Identities=17% Similarity=0.158 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecCccccccCc-cccCCCcccccCCCCCCCeecC
Q psy3761 112 LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VREFCGHGIGK-NFHEEPRVMNYGIPGTLEKLKT 189 (256)
Q Consensus 112 ~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG~-~~~e~p~i~~~~~~~~~~~l~~ 189 (256)
+.++++-+.+.++++.+.+.++||++-.||.+.+++.+.+.|... ++..+ ++|- ..|-.| . ++++.+|++
T Consensus 3 ~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~~~H~~p---~---~~d~~~l~~ 74 (291)
T PRK08671 3 EKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPAFPCNI--SINEVAAHYTP---S---PGDERVFPE 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCCccCCCC---C---CCCCcccCC
Confidence 356788889999999999999999999999999999999988542 11111 1111 112111 1 345678999
Q ss_pred CCEEEEeeEEEc
Q psy3761 190 GMIFTVEPMINE 201 (256)
Q Consensus 190 gmv~~iep~~~~ 201 (256)
|+++.++.+...
T Consensus 75 GDvV~iD~G~~~ 86 (291)
T PRK08671 75 GDVVKLDLGAHV 86 (291)
T ss_pred CCEEEEEEeEEE
Confidence 999999988765
No 52
>PRK15173 peptidase; Provisional
Probab=96.70 E-value=0.024 Score=49.45 Aligned_cols=100 Identities=8% Similarity=0.040 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccC-CCCccc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGI-PGNKIL 80 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~-p~~~~l 80 (256)
|++-+++.++++++++.++||++-.||...+.+.+.+ .|....+..+.| +..-...|... .|... .++.+|
T Consensus 205 ~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~-~G~~~~~~~~~G------HGiG~~lg~~E-~P~i~~~~~~~L 276 (323)
T PRK15173 205 RKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK-SGLPNYNRGHLG------HGNGVFLGLEE-SPFVSTHATESF 276 (323)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccccCCCCC------CcCCCCCCcCC-CCCCCCCCCCcc
Confidence 5778889999999999999999999999999999988 786533222211 21001112221 11111 235789
Q ss_pred CCCCEEEEeEEEEe-CcEEEEEEEEEEeCC
Q psy3761 81 KKGDILNIDITVIK-NGYYGDTSRMFYVGE 109 (256)
Q Consensus 81 ~~Gd~v~id~g~~~-~gy~~d~~Rt~~vG~ 109 (256)
++|.++.++.+... +-+..-+.-|++|.+
T Consensus 277 e~GMV~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 277 TSGMVLSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred CCCCEEEECCEEEcCCCcEEEEeeEEEEcC
Confidence 99999999988753 334467899999943
No 53
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.61 E-value=0.02 Score=48.00 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC--eeeccC-C-CC
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND--VVCHGI-P-GN 77 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~--~~~h~~-p-~~ 77 (256)
|++-+++..+++++++.++||++-.|+...+++.+.+ .|.... ..+.| +. +...... .+.++. + +.
T Consensus 120 ~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~-~g~~~~-~~~~G------Hg--iGl~~hE~P~i~~~~~~~~~ 189 (248)
T PRK12897 120 EKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVAN-EGFSVA-RDFTG------HG--IGKEIHEEPAIFHFGKQGQG 189 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH-cCCccC-CCeEE------Cc--cCCcccCCCccCCCCCCCCC
Confidence 5677888899999999999999999999999998888 776532 22222 22 2222111 112211 2 24
Q ss_pred cccCCCCEEEEeEEEE-----------------eCc-EEEEEEEEEEeCC
Q psy3761 78 KILKKGDILNIDITVI-----------------KNG-YYGDTSRMFYVGE 109 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~-----------------~~g-y~~d~~Rt~~vG~ 109 (256)
.+|++|.++.++.+.. ++| +..-+.-|++|.+
T Consensus 190 ~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 190 PELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 6899999999998876 244 6778888998854
No 54
>PRK09795 aminopeptidase; Provisional
Probab=96.58 E-value=0.032 Score=49.43 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCC-CCccc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIP-GNKIL 80 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l 80 (256)
+++-+++.++.+++++.++||++-.||.+.+++.+.+ .|....+....| +. +...... .|.-.| ++.+|
T Consensus 243 ~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~-~g~~~~~~h~~G------Hg--iGl~~he-~p~i~~~~~~~l 312 (361)
T PRK09795 243 FNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITE-AGYGDYFGHNTG------HA--IGIEVHE-DPRFSPRDTTTL 312 (361)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCCccCCCCCC------cc--CCccccC-CCCcCCCCCCCc
Confidence 4566778888889999999999999999999999988 776543322222 22 2222111 111112 35889
Q ss_pred CCCCEEEEeEEEEeCc-EEEEEEEEEEeC
Q psy3761 81 KKGDILNIDITVIKNG-YYGDTSRMFYVG 108 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~g-y~~d~~Rt~~vG 108 (256)
++|.++.|+.+....| ...-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 9999999999886554 346678889884
No 55
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.57 E-value=0.045 Score=44.28 Aligned_cols=84 Identities=20% Similarity=0.204 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHH-HHhcCCeeecCccccccCccccCCCcccccCCCCCCCeecCC
Q psy3761 112 LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKH-AEKYGYSVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTG 190 (256)
Q Consensus 112 ~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~-~~~~G~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~g 190 (256)
+.+|++.+.+.++++++++.++||++-.||...+.+. +.+.|.....+..-=+.|.. ..+.++ .+ ++.+|++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~~~-~~-~~~~l~~g 74 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPN----TDLPHY-TP-TDRRLQEG 74 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCC----CGETTT-BC-CSSBESTT
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCc----ceecce-ec-cceeeecC
Confidence 3578899999999999999999999999999999987 77777432111100111111 111121 13 47789999
Q ss_pred CEEEEeeEEEc
Q psy3761 191 MIFTVEPMINE 201 (256)
Q Consensus 191 mv~~iep~~~~ 201 (256)
+.+.++-+...
T Consensus 75 d~v~id~~~~~ 85 (207)
T PF00557_consen 75 DIVIIDFGPRY 85 (207)
T ss_dssp EEEEEEEEEEE
T ss_pred Ccceeecccee
Confidence 99999977764
No 56
>PRK14576 putative endopeptidase; Provisional
Probab=96.49 E-value=0.041 Score=49.62 Aligned_cols=100 Identities=8% Similarity=0.032 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCC-CCccc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIP-GNKIL 80 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p-~~~~l 80 (256)
+++-+++.++.+++++.+|||++-.||...+.+.+.+ .|....+..+.| +..-...|... .|...+ ++.+|
T Consensus 287 ~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~-~G~~~~~~~~~G------HgiG~~l~~~e-~P~i~~~~~~~L 358 (405)
T PRK14576 287 QQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKT-SGLPHYNRGHLG------HGDGVFLGLEE-VPFVSTQATETF 358 (405)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccccCCCCC------CCCCCCCCcCc-CCCcCCCCCCcc
Confidence 5677888999999999999999999999999999988 886543322222 22111122221 122222 35789
Q ss_pred CCCCEEEEeEEEEeCc-EEEEEEEEEEeCC
Q psy3761 81 KKGDILNIDITVIKNG-YYGDTSRMFYVGE 109 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~g-y~~d~~Rt~~vG~ 109 (256)
++|.++.++.+....| ...-+.-|++|.+
T Consensus 359 e~GMv~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 359 CPGMVLSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred CCCCEEEECCceeecCCCEEEEeeEEEECC
Confidence 9999999987654333 4455789999943
No 57
>PRK14575 putative peptidase; Provisional
Probab=96.47 E-value=0.037 Score=49.89 Aligned_cols=98 Identities=7% Similarity=0.012 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeee--eecCCeeeccC-CCCc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSIC--TSVNDVVCHGI-PGNK 78 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~--~g~~~~~~h~~-p~~~ 78 (256)
|++.+++.++.+++++.+|||++-.||.+.+.+.+.+ .|....+....| +. ++ .|.... |... -++.
T Consensus 288 ~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~-~G~~~~~~~~~G------HG--iG~~lg~~e~-P~i~~~~~~ 357 (406)
T PRK14575 288 RKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK-SGLPNYNRGHLG------HG--NGVFLGLEES-PFVSTHATE 357 (406)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccccCCCCC------Cc--ccCCCCCccC-CCCCCCCCC
Confidence 5678889999999999999999999999999999988 786543322211 21 22 122111 1111 2357
Q ss_pred ccCCCCEEEEeEEEEeCc-EEEEEEEEEEeCC
Q psy3761 79 ILKKGDILNIDITVIKNG-YYGDTSRMFYVGE 109 (256)
Q Consensus 79 ~l~~Gd~v~id~g~~~~g-y~~d~~Rt~~vG~ 109 (256)
+|++|.++.++.+....| +..-+.-|++|.+
T Consensus 358 ~Le~GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 358 SFTSGMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CcCCCCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 899999999998876433 4567899999954
No 58
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=96.43 E-value=0.056 Score=49.28 Aligned_cols=84 Identities=19% Similarity=0.205 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhc----CCeeecCccccccCccccCCCcccccCCCCCCCeecC
Q psy3761 114 AKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKY----GYSVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKT 189 (256)
Q Consensus 114 ~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~----G~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~ 189 (256)
++++-+.+..+++.+.+.++||++..||...+.+.+++. |......| --+++++..-....++ ++++.+|++
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N~~aaH~tP~---~gd~~vLk~ 236 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLNHCAAHYTPN---TGDKTVLTY 236 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecCccccCCCCC---CCCCcEecC
Confidence 455566666777777888999999999999877765543 43210111 0123322111111211 345789999
Q ss_pred CCEEEEeeEEEc
Q psy3761 190 GMIFTVEPMINE 201 (256)
Q Consensus 190 gmv~~iep~~~~ 201 (256)
|+++.|+.+...
T Consensus 237 GDvVkID~G~~v 248 (470)
T PTZ00053 237 DDVCKLDFGTHV 248 (470)
T ss_pred CCeEEEEEeEEE
Confidence 999999988876
No 59
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.43 E-value=0.028 Score=47.05 Aligned_cols=99 Identities=18% Similarity=0.180 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCC--CCCCCCCCCCCCCCCCCeeeeecCCeeeccCC-CCc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTI--PAPLNYCPQKGGIPFPKSICTSVNDVVCHGIP-GNK 78 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~--~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p-~~~ 78 (256)
|++-+++.++.+++++.+|||++-.|+...+.+.+.+ .+.. ..+....| +. ++...+.....-.+ +++
T Consensus 122 ~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~-~~~~~~~~~~~~~G------Hg--iGle~hE~~~~l~~~~~~ 192 (243)
T cd01091 122 QKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK-KKPELEPNFTKNLG------FG--IGLEFRESSLIINAKNDR 192 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-hChhHHHhCcCCcc------cc--cCcccccCccccCCCCCC
Confidence 6778888999999999999999999999999998887 5522 11111111 21 22222221111112 357
Q ss_pred ccCCCCEEEEeEEEE-e----------CcEEEEEEEEEEeCC
Q psy3761 79 ILKKGDILNIDITVI-K----------NGYYGDTSRMFYVGE 109 (256)
Q Consensus 79 ~l~~Gd~v~id~g~~-~----------~gy~~d~~Rt~~vG~ 109 (256)
+|++|.++.++.|.. + ..|..-++-|++|.+
T Consensus 193 ~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 193 KLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 899999999998875 3 258888999999954
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.42 E-value=0.068 Score=44.16 Aligned_cols=104 Identities=18% Similarity=0.103 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecC--ccccccCcc--ccCCCcccccCC-C-CCCCe
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVRE--FCGHGIGKN--FHEEPRVMNYGI-P-GTLEK 186 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~--~~GHgiG~~--~~e~p~i~~~~~-~-~~~~~ 186 (256)
.++++-+.+.++++.+++.++||++-.||...+++.+.+.....+.. ....++... +.-...+.++.. + .++.+
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~~ 82 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATYT 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCcc
Confidence 57888899999999999999999999999988888877743221111 111111110 000000111110 1 36678
Q ss_pred ecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcC
Q psy3761 187 LKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTK 234 (256)
Q Consensus 187 l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~ 234 (256)
|++|+++.++.+.... | |..-+..|+.|.+
T Consensus 83 l~~Gd~v~iD~g~~~~---------G---------Y~sD~tRT~~vG~ 112 (228)
T cd01089 83 LKDGDVVKIDLGCHID---------G---------YIAVVAHTIVVGA 112 (228)
T ss_pred cCCCCEEEEEEEEEEC---------C---------EEEEEEEEEEeCC
Confidence 9999999999887652 2 2345788998864
No 61
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.29 E-value=0.052 Score=46.67 Aligned_cols=84 Identities=19% Similarity=0.186 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecC--CeeeccCCC-Cc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVN--DVVCHGIPG-NK 78 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~--~~~~h~~p~-~~ 78 (256)
|++.+++.++++++++.++||++-.||...+.+.+.+ .|.... ..+.| +. +..... ..+++..++ +.
T Consensus 161 ~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~-~G~~~~-~~~~G------Hg--IGl~~hE~P~i~~~~~~~~~ 230 (291)
T PRK12318 161 KKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADK-YGFSVV-DQFVG------HG--VGIKFHENPYVPHHRNSSKI 230 (291)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-cCCccC-CCccc------CC--cCccccCCCcccCcCCCCCC
Confidence 6777888899999999999999999999999999988 776531 11222 22 222211 112222222 46
Q ss_pred ccCCCCEEEEeEEEEeC
Q psy3761 79 ILKKGDILNIDITVIKN 95 (256)
Q Consensus 79 ~l~~Gd~v~id~g~~~~ 95 (256)
+|++|.++.++.+....
T Consensus 231 ~L~~GMV~~iEP~i~~~ 247 (291)
T PRK12318 231 PLAPGMIFTIEPMINVG 247 (291)
T ss_pred EeCCCCEEEECCEEEcC
Confidence 89999999999876543
No 62
>KOG2738|consensus
Probab=96.24 E-value=0.038 Score=46.74 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee-ecCccc--cccCccccCCCcccccCCCCCCCeecC
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV-VREFCG--HGIGKNFHEEPRVMNYGIPGTLEKLKT 189 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~~e~p~i~~~~~~~~~~~l~~ 189 (256)
.+|++-+.+++.++.+..++|||++..||++++.+..=++|.-+ ..++.| -++-..+.|- |-+ +.| +.++||.
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEv--iCH-GIP-D~RpLed 199 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEV--ICH-GIP-DSRPLED 199 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhhe--eec-CCC-CcCcCCC
Confidence 44566677788899999999999999999999998877776422 111111 1222233331 101 223 4568999
Q ss_pred CCEEEEeeEEEc
Q psy3761 190 GMIFTVEPMINE 201 (256)
Q Consensus 190 gmv~~iep~~~~ 201 (256)
|..+.|...+|.
T Consensus 200 GDIvNiDVtvY~ 211 (369)
T KOG2738|consen 200 GDIVNIDVTVYL 211 (369)
T ss_pred CCEEeEEEEEEe
Confidence 999999999997
No 63
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.20 E-value=0.055 Score=46.40 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC--eeecc-CC-CC
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND--VVCHG-IP-GN 77 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~--~~~h~-~p-~~ 77 (256)
|++.+++.++++++++.++||++-.||...+++.+.+ .|... +..+.| +. +...... .+++. .+ .+
T Consensus 151 ~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~-~G~~~-~~~~~G------HG--IGl~~hE~P~i~~~~~~~~~ 220 (286)
T PRK07281 151 KNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAES-RGYGV-VRDLVG------HG--VGPTMHEEPMVPNYGTAGRG 220 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-cCCcc-CCCeee------ee--CCCccCCCCcCCCcccCCCC
Confidence 6788899999999999999999999999999998887 77543 222222 21 1111111 11211 12 34
Q ss_pred cccCCCCEEEEeEEEEeC-------------------cEEEEEEEEEEeC
Q psy3761 78 KILKKGDILNIDITVIKN-------------------GYYGDTSRMFYVG 108 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~~-------------------gy~~d~~Rt~~vG 108 (256)
.+|++|.++.|+.+.... +..+-+.-|++|-
T Consensus 221 ~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT 270 (286)
T PRK07281 221 LRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVIT 270 (286)
T ss_pred CEECCCCEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEe
Confidence 689999999999888542 2336677788874
No 64
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.14 E-value=0.073 Score=44.33 Aligned_cols=82 Identities=13% Similarity=0.199 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCccccccCccccCCCcccccCCCCCCCeecCCCE
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMI 192 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv 192 (256)
.++++-+.+.++++++.+.++||++-.||...++..+.+.|... . +..-++.... ...+++ ..++.+|++|.+
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~--~-~~~~v~~g~~--~~~~H~--~~~~~~l~~Gd~ 75 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL--A-YSYIVAAGSN--AAILHY--VHNDQPLKDGDL 75 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc--C-CCCeEEECCC--ccccCC--CcCCCcCCCCCE
Confidence 57888899999999999999999999999999999999988651 1 1111211111 111121 123668999999
Q ss_pred EEEeeEEEc
Q psy3761 193 FTVEPMINE 201 (256)
Q Consensus 193 ~~iep~~~~ 201 (256)
+.++.+...
T Consensus 76 v~vD~g~~~ 84 (243)
T cd01087 76 VLIDAGAEY 84 (243)
T ss_pred EEEEeCceE
Confidence 999977654
No 65
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=95.81 E-value=0.11 Score=46.59 Aligned_cols=97 Identities=19% Similarity=0.139 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC----eeeccCC-C
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND----VVCHGIP-G 76 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~----~~~h~~p-~ 76 (256)
|++-+++.++.+++++.++||+|-.||.+.+.+.+.+ .|.... ...| ++ +..+... ..+.-.+ +
T Consensus 273 ~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~-~G~~~~--h~~G------hg--iGl~~~~~~~e~~~~l~~~~ 341 (391)
T TIGR02993 273 LDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKK-YGIHKD--SRTG------YP--IGLSYPPDWGERTMSLRPGD 341 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccC--CCce------ee--eccCcCCCCCCccccccCCC
Confidence 5778889999999999999999999999999998888 775431 1112 22 1111110 0011112 3
Q ss_pred CcccCCCCEEEEeEEEEeCcEEEEEEEEEEeCC
Q psy3761 77 NKILKKGDILNIDITVIKNGYYGDTSRMFYVGE 109 (256)
Q Consensus 77 ~~~l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~ 109 (256)
+.+|++|.++.++.+....|+..-+.-|++|.+
T Consensus 342 ~~~L~~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 342 NTVLKPGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CceecCCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 578999999999999877777778888999943
No 66
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=94.92 E-value=0.26 Score=44.00 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeee--eecCCeee-ccCC-CC
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSIC--TSVNDVVC-HGIP-GN 77 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~--~g~~~~~~-h~~p-~~ 77 (256)
|+.-.++.++.+++++.++||++-.|+.+..++.+.+ .|....+..- +...++ ..... .| ...+ ++
T Consensus 265 ~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~-~g~~~~~~h~--------~GHgvG~~l~vhE-~p~~~~~~~~ 334 (384)
T COG0006 265 REIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEK-AGYGLYFLHG--------TGHGVGFVLDVHE-HPQYLSPGSD 334 (384)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHh-cCCcccccCC--------ccccCCCCcccCc-CccccCCCCC
Confidence 5677889999999999999999999999999999988 6655432211 111122 11111 11 1112 46
Q ss_pred cccCCCCEEEEeEEEE-eCcEEEEEEEEEEeCC
Q psy3761 78 KILKKGDILNIDITVI-KNGYYGDTSRMFYVGE 109 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~-~~gy~~d~~Rt~~vG~ 109 (256)
.+|++|-++.++.|.. .+.+-.-+..+++|.+
T Consensus 335 ~~L~~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 335 TTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred ccccCCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 7999999999999965 4669999999999965
No 67
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=93.47 E-value=0.86 Score=37.57 Aligned_cols=84 Identities=11% Similarity=0.049 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CchhhHHHHHHHHHHhcC-CeeecCccccccCccccCCCcccccCC-CCCCCeecC
Q psy3761 114 AKRLSDISFECMWIGIVKIKPG--IHLGDIGYAIQKHAEKYG-YSVVREFCGHGIGKNFHEEPRVMNYGI-PGTLEKLKT 189 (256)
Q Consensus 114 ~~~~~~~~~~a~~~~~~~~kpG--~~~~ev~~~~~~~~~~~G-~~~~~~~~GHgiG~~~~e~p~i~~~~~-~~~~~~l~~ 189 (256)
+.+.-..+.++++.+.+.++|| ++-.||.+.+.+++...| +... .+ ...+...... .++++.. +.++.+|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~-~f-~~~v~~g~n~--~~~H~~p~~~~~r~l~~ 81 (224)
T cd01085 6 HIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGL-SF-DTISGFGPNG--AIVHYSPTEESNRKISP 81 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCC-Cc-ceEEEecCcc--CcCCCCcCcccCcccCC
Confidence 3344445568888889999999 999999999998887654 2110 01 1111111110 1111110 123779999
Q ss_pred CCEEEEeeEEEc
Q psy3761 190 GMIFTVEPMINE 201 (256)
Q Consensus 190 gmv~~iep~~~~ 201 (256)
|.++.++.+...
T Consensus 82 GD~V~iD~g~~~ 93 (224)
T cd01085 82 DGLYLIDSGGQY 93 (224)
T ss_pred CCEEEEEeCccC
Confidence 999999988765
No 68
>KOG2775|consensus
Probab=92.71 E-value=0.61 Score=39.72 Aligned_cols=84 Identities=17% Similarity=0.151 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHH----hcCCeeecCccccccCcccc--CCCcccccCCCCCCC
Q psy3761 112 LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAE----KYGYSVVREFCGHGIGKNFH--EEPRVMNYGIPGTLE 185 (256)
Q Consensus 112 ~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~----~~G~~~~~~~~GHgiG~~~~--e~p~i~~~~~~~~~~ 185 (256)
.+.+++.++=+++...+.+.+|||++.-||.+.+++.-+ +.|.. ...|...|+... -..+.+| +++.+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cAAHyTpN---aGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCAAHYTPN---AGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchhhhcCCC---CCCce
Confidence 344556666667777778899999999999988776544 44443 334444554332 1123334 67889
Q ss_pred eecCCCEEEEeeEEEc
Q psy3761 186 KLKTGMIFTVEPMINE 201 (256)
Q Consensus 186 ~l~~gmv~~iep~~~~ 201 (256)
+|+...|.-|.-+...
T Consensus 160 VLqydDV~KiDfGthi 175 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHI 175 (397)
T ss_pred eeeecceEEEeccccc
Confidence 9999999999877765
No 69
>PRK10879 proline aminopeptidase P II; Provisional
Probab=92.67 E-value=1.5 Score=40.04 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCee--ecCccccccCccccCCCcccccCCCCCCCeecCCCE
Q psy3761 115 KRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSV--VREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKTGMI 192 (256)
Q Consensus 115 ~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~--~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv 192 (256)
+++.+.+..++..+++.++||++=.||...+...+.+.|... +...++ .|... .++++ ..++..|++|.+
T Consensus 183 r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~~~iv~--~G~na----~~~H~--~~~~~~l~~GDl 254 (438)
T PRK10879 183 RRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYPSYNTIVG--SGENG----CILHY--TENESEMRDGDL 254 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCcEEE--EcCcc----ccccC--CCCccccCCCCE
Confidence 456667777888889999999999999999999999988642 111121 12111 11222 124568999999
Q ss_pred EEEeeEEEc
Q psy3761 193 FTVEPMINE 201 (256)
Q Consensus 193 ~~iep~~~~ 201 (256)
+.++.+...
T Consensus 255 VliD~G~~~ 263 (438)
T PRK10879 255 VLIDAGCEY 263 (438)
T ss_pred EEEEeCeEE
Confidence 999977654
No 70
>KOG2776|consensus
Probab=89.37 E-value=2.6 Score=36.84 Aligned_cols=93 Identities=19% Similarity=0.187 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhc-------------CCee-----ecCccccccCccccCCCc
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKY-------------GYSV-----VREFCGHGIGKNFHEEPR 174 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~-------------G~~~-----~~~~~GHgiG~~~~e~p~ 174 (256)
..+.+-+.+..++...++.++||++..||....-+.+.++ |+.. +.+..+| =.|.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPl 95 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPL 95 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcC
Confidence 3456667788888899999999999999987665544332 2111 0111222 2232
Q ss_pred ccccCCCCCCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCC
Q psy3761 175 VMNYGIPGTLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKN 235 (256)
Q Consensus 175 i~~~~~~~~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~ 235 (256)
. .+.+.+|++|.++-|.-++.. |||. +-+.+|++|++-
T Consensus 96 k-----sd~~~~Lk~GDvVKIdLG~Hi---------DGfi---------A~vaHT~VV~~~ 133 (398)
T KOG2776|consen 96 K-----SDADYTLKEGDVVKIDLGVHI---------DGFI---------ALVAHTIVVGPA 133 (398)
T ss_pred C-----CCCcccccCCCEEEEEeeeee---------ccce---------eeeeeeEEeccC
Confidence 2 234789999999999988886 5544 668999999864
No 71
>PRK13607 proline dipeptidase; Provisional
Probab=82.38 E-value=16 Score=33.45 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q psy3761 3 IAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYM 36 (256)
Q Consensus 3 ~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~ 36 (256)
+.-+++.++.+++++.++||++-.||.....+.+
T Consensus 272 ~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 272 ALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred HHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 4567788888999999999999999987665544
No 72
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=78.56 E-value=14 Score=29.45 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeecCccccccCccccCCCcccccCCCCCCCeecC
Q psy3761 110 PSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVREFCGHGIGKNFHEEPRVMNYGIPGTLEKLKT 189 (256)
Q Consensus 110 ~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~ 189 (256)
+.++++...+.+.+=..++++..-|..+.....+.+++.+.+-.- .++.-|-+|-- -+|. .++. +.
T Consensus 113 ~~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GAi----RYVv----ad~g---ek 178 (200)
T PF07305_consen 113 QGPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGAI----RYVV----ADNG---EK 178 (200)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCce----EEEE----ecCC---Cc
Confidence 347788888888888888899999999999999999988877432 24555555531 1222 3444 67
Q ss_pred CCEEEEeeEE
Q psy3761 190 GMIFTVEPMI 199 (256)
Q Consensus 190 gmv~~iep~~ 199 (256)
|++|+|||.-
T Consensus 179 glTFAVEPIK 188 (200)
T PF07305_consen 179 GLTFAVEPIK 188 (200)
T ss_pred eeEEEeeeee
Confidence 9999999874
No 73
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=69.78 E-value=19 Score=24.11 Aligned_cols=52 Identities=19% Similarity=0.323 Sum_probs=31.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC-eeeccCCCCcccCCCCEEEE
Q psy3761 19 IKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND-VVCHGIPGNKILKKGDILNI 88 (256)
Q Consensus 19 i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~-~~~h~~p~~~~l~~Gd~v~i 88 (256)
++.|.|-.|++..+...+.+ . |......|.+. ..+.-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~-~-----------------f~~A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVK-Q-----------------FKYALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHH-h-----------------CCeeEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 57899999999988876655 1 11111112111 01123456788999999986
No 74
>KOG1189|consensus
Probab=69.71 E-value=20 Score=34.80 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCC--CCCCCCCCCCCCCCCeeeeecCCeeeccCCCCcc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPA--PLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKI 79 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~--~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~ 79 (256)
.+|-...-++.+++++.+|||.+-.+|...+...+.+ .+-+.. +..-.| |...+-+-+++..... -.++.
T Consensus 260 q~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k-~~Pel~~~~~k~lG------~~iGlEFREssl~ina-Knd~~ 331 (960)
T KOG1189|consen 260 QENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEK-NKPELVPNFTKNLG------FGIGLEFRESSLVINA-KNDRV 331 (960)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHh-cCcchhhhhhhhcc------cccceeeecccccccc-cchhh
Confidence 3444555667778899999999999999999998877 554321 111112 2211222233322221 23589
Q ss_pred cCCCCEEEEeEEEE-------eCcEEEEEEEEEEeCC
Q psy3761 80 LKKGDILNIDITVI-------KNGYYGDTSRMFYVGE 109 (256)
Q Consensus 80 l~~Gd~v~id~g~~-------~~gy~~d~~Rt~~vG~ 109 (256)
|++|++..|.+|.. -+-|.--++-|+.||+
T Consensus 332 lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 332 LKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred hccCcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 99999999999865 2347777999999985
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=54.79 E-value=43 Score=22.85 Aligned_cols=50 Identities=24% Similarity=0.255 Sum_probs=35.9
Q ss_pred cccCCCCEEEEeEEEEe-CcEEEEEE------EEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3761 78 KILKKGDILNIDITVIK-NGYYGDTS------RMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGI 136 (256)
Q Consensus 78 ~~l~~Gd~v~id~g~~~-~gy~~d~~------Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~ 136 (256)
+..++||.|.+++.+.. +|-.-|-+ .+|.+|... ...+++.++..|++|-
T Consensus 3 ~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~---------~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 3 RTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ---------VIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS---------SSHHHHHHHTTSBTTE
T ss_pred ccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc---------cccchhhhcccccCCC
Confidence 55789999999999987 78777777 677777421 2235666677777775
No 76
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=50.43 E-value=11 Score=24.61 Aligned_cols=18 Identities=28% Similarity=0.521 Sum_probs=14.0
Q ss_pred HHhhcCCCCCCHHHHHHH
Q psy3761 14 YIAPFIKPGVTTEEINEI 31 (256)
Q Consensus 14 ~~~~~i~pG~te~el~~~ 31 (256)
..++.|++|||..||.+.
T Consensus 7 ~~~~~i~~GmTk~qV~~l 24 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRAL 24 (71)
T ss_dssp HHHTTT-TTSBHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHh
Confidence 456789999999999863
No 77
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=44.68 E-value=71 Score=21.03 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhc
Q psy3761 110 PSLVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKY 152 (256)
Q Consensus 110 ~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~ 152 (256)
.+.+|+.+.+.+.+..+.+...++.|.+..=+....+.+++..
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L 52 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALESL 52 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3688999999999999999999999987666666666665543
No 78
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=43.02 E-value=69 Score=27.30 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=46.5
Q ss_pred EEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCch-hhHHHHHHHHHHhcCC
Q psy3761 98 YGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIHL-GDIGYAIQKHAEKYGY 154 (256)
Q Consensus 98 ~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~-~ev~~~~~~~~~~~G~ 154 (256)
-+-.+|..++ ++++++..-....++.++.+.+.-|..- .++-+++.+.+.+.++
T Consensus 184 LA~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~ 238 (285)
T COG0414 184 LALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGF 238 (285)
T ss_pred cchhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCC
Confidence 4566888888 8899999999999999999999999866 8999999999987665
No 79
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=39.42 E-value=1.2e+02 Score=21.50 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=49.9
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-------chhhHHHHHHHHHHhc
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGI-------HLGDIGYAIQKHAEKY 152 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~-------~~~ev~~~~~~~~~~~ 152 (256)
+..|-. ..|+......|- .+++.+.+- -..+.++..+.........+..+--|+ +-.+..+.+.+.|++.
T Consensus 18 Vd~Gg~-V~DV~veHp~YG-~i~~~L~i~-sr~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~ 94 (98)
T PF02829_consen 18 VDNGGR-VLDVIVEHPVYG-EITGNLNIS-SRRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKK 94 (98)
T ss_dssp HHTT-E-EEEEEEEETTTE-EEEEEEEE--SHHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred HHCCCE-EEEEEEeCCCCc-EEEEEEecC-CHHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHC
Confidence 444544 448888888888 999999994 356677777777777666777777773 5567888999999999
Q ss_pred CC
Q psy3761 153 GY 154 (256)
Q Consensus 153 G~ 154 (256)
||
T Consensus 95 G~ 96 (98)
T PF02829_consen 95 GF 96 (98)
T ss_dssp T-
T ss_pred CC
Confidence 87
No 80
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=38.53 E-value=1e+02 Score=29.60 Aligned_cols=72 Identities=19% Similarity=0.385 Sum_probs=45.3
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeee--ec--C-CeeeccCCCCcccCCCC
Q psy3761 10 EVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICT--SV--N-DVVCHGIPGNKILKKGD 84 (256)
Q Consensus 10 ~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~--g~--~-~~~~h~~p~~~~l~~Gd 84 (256)
...+.++..+|||.+-.+|...+..++.. .|-+... + |.-.+++ |. + +..+...-..|+||.|+
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~-~~pel~p-n---------F~~nvG~~igiefR~s~~~~nvkn~r~lq~g~ 377 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISS-NGPELGP-N---------FIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGC 377 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHh-cCCccCc-h---------HhhhhhhhccccccccccceeccCCceecccc
Confidence 34446777899999999999999999987 7654210 1 2111221 21 1 12222333468999999
Q ss_pred EEEEeEEE
Q psy3761 85 ILNIDITV 92 (256)
Q Consensus 85 ~v~id~g~ 92 (256)
++.|.+|.
T Consensus 378 ~fnis~gf 385 (1001)
T COG5406 378 IFNISLGF 385 (1001)
T ss_pred EEEEeecc
Confidence 99988853
No 81
>PLN02660 pantoate--beta-alanine ligase
Probab=35.01 E-value=1.4e+02 Score=25.65 Aligned_cols=55 Identities=9% Similarity=-0.020 Sum_probs=44.7
Q ss_pred EEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-chhhHHHHHHHHHHhcCC
Q psy3761 97 YYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGI-HLGDIGYAIQKHAEKYGY 154 (256)
Q Consensus 97 y~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~ 154 (256)
--+-.+|..++ ++++++......+++..+.+.++.|. ...++-+.+.+.+.+.|+
T Consensus 187 GLA~SSRN~yL---s~~eR~~A~~l~~~L~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 242 (284)
T PLN02660 187 GLAMSSRNVRL---SAEEREKALSISRSLARAEELVEEGETDADELKEQVRQAIAEAGG 242 (284)
T ss_pred CCeeccccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhCCC
Confidence 34566888888 78899888888888888888888886 567788888899988765
No 82
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=34.23 E-value=68 Score=16.14 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=15.7
Q ss_pred cCCCCEEEEeEEEEeCcEEEEEEE
Q psy3761 80 LKKGDILNIDITVIKNGYYGDTSR 103 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy~~d~~R 103 (256)
+++||.|.|-- +.+.|..+-+.+
T Consensus 2 ~~~G~~V~I~~-G~~~g~~g~i~~ 24 (28)
T smart00739 2 FEVGDTVRVIA-GPFKGKVGKVLE 24 (28)
T ss_pred CCCCCEEEEeE-CCCCCcEEEEEE
Confidence 57899999844 557777665543
No 83
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=34.09 E-value=97 Score=20.69 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=30.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCcccCCCCEEEE
Q psy3761 19 IKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKILKKGDILNI 88 (256)
Q Consensus 19 i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~Gd~v~i 88 (256)
++.|.|-.|++..++.-+.+ +.. +. ...+ +.....+..+++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~--~F~--------------~A--~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEK--GFI--------------EA--VGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHh--ccE--------------EE--EEcc-----CEEECCCEEecCCCEEEE
Confidence 56799999999988876654 211 11 1112 122345678999999986
No 84
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=33.61 E-value=59 Score=18.08 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q psy3761 4 AGKLSAEVLDYIAPFIKPGVTTEEINEICHNYM 36 (256)
Q Consensus 4 A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~ 36 (256)
.+.++..++..+.+.++...|+.+|...+.+..
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C 35 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKAC 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 356788889999999999999999999888755
No 85
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=32.51 E-value=2.2e+02 Score=21.47 Aligned_cols=97 Identities=11% Similarity=-0.054 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCC--eeeccCC-CCc
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVND--VVCHGIP-GNK 78 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~--~~~h~~p-~~~ 78 (256)
+-++++++++++.-.+.+--.-++ +.++.+.+.+.. ..... |-|....|... ..|-... .+.
T Consensus 16 ~~~c~L~~ka~~~g~rv~I~~~d~-~~a~~lD~~LW~-~~~~s-------------FlPH~~~~~~~~~~~PV~l~~~~~ 80 (142)
T PRK05728 16 ALLCELAEKALRAGWRVLVQCEDE-EQAEALDEALWT-FRDES-------------FLPHGLAGEGPAAGQPVLLTWPGK 80 (142)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhcC-CCCCc-------------CCCCCcCCCCCCCCCCEEEEcCCC
Confidence 457888888888766555444444 456667777765 33221 21111111110 0000000 111
Q ss_pred ccCCCCEEEEeEEEEeCcEEEEEEEEEEe-CCCCHHH
Q psy3761 79 ILKKGDILNIDITVIKNGYYGDTSRMFYV-GEPSLVA 114 (256)
Q Consensus 79 ~l~~Gd~v~id~g~~~~gy~~d~~Rt~~v-G~~~~~~ 114 (256)
.-..++-++|.+....-.+.+...|.+-+ |. +++.
T Consensus 81 ~~~~~~~~LinL~~~~p~~~~~F~Rvieiv~~-d~~~ 116 (142)
T PRK05728 81 RNANHRDLLINLDGAVPAFAAAFERVVDFVGY-DEAA 116 (142)
T ss_pred CCCCCCcEEEECCCCCcchhhcccEEEEEeCC-CHHH
Confidence 22345566777877777788888998765 54 4443
No 86
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=32.17 E-value=62 Score=22.37 Aligned_cols=25 Identities=36% Similarity=0.698 Sum_probs=20.8
Q ss_pred HHHHHhhcCCCCCCHHHHHHHHHHH
Q psy3761 11 VLDYIAPFIKPGVTTEEINEICHNY 35 (256)
Q Consensus 11 ~~~~~~~~i~pG~te~el~~~~~~~ 35 (256)
.+..+.+.|+|+||-.|+.+.++..
T Consensus 37 LLdNL~~YI~~~Ms~edi~~II~nM 61 (95)
T PF04363_consen 37 LLDNLSDYIKPDMSIEDIRAIIENM 61 (95)
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHH
Confidence 3667788899999999999988763
No 87
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=31.99 E-value=55 Score=24.38 Aligned_cols=28 Identities=7% Similarity=0.265 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q psy3761 5 GKLSAEVLDYIAPFIKPGVTTEEINEIC 32 (256)
Q Consensus 5 ~~i~~~~~~~~~~~i~pG~te~el~~~~ 32 (256)
+.++..+...+.+.+..|.|+.||...+
T Consensus 56 a~iA~dmR~~Vr~~i~~G~Sd~eI~~~~ 83 (126)
T TIGR03147 56 SPIAYDLRHEVYSMVNEGKSNQQIIDFM 83 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4678888889999999999999988643
No 88
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=30.99 E-value=1.5e+02 Score=25.38 Aligned_cols=54 Identities=11% Similarity=0.138 Sum_probs=43.8
Q ss_pred EEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-chhhHHHHHHHHHHhcCC
Q psy3761 98 YGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGI-HLGDIGYAIQKHAEKYGY 154 (256)
Q Consensus 98 ~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~ 154 (256)
-+-.+|..++ ++++++......+++..+.+.++.|. ...++-+.+.+.+.+.|+
T Consensus 185 LA~SSRN~~L---s~~eR~~A~~l~~~L~~a~~~~~~g~~~~~~i~~~~~~~l~~~~~ 239 (282)
T TIGR00018 185 LALSSRNVYL---TAEQRKIAPGLYRALQAIAQAIQAGERDLDAVITIAGDILDTKSF 239 (282)
T ss_pred CchhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC
Confidence 4566888888 78899888888888888888888886 457777888888888765
No 89
>PRK05423 hypothetical protein; Provisional
Probab=30.26 E-value=70 Score=22.45 Aligned_cols=26 Identities=42% Similarity=0.727 Sum_probs=20.9
Q ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHH
Q psy3761 11 VLDYIAPFIKPGVTTEEINEICHNYM 36 (256)
Q Consensus 11 ~~~~~~~~i~pG~te~el~~~~~~~~ 36 (256)
.+..+.+.|+|+||-.|+.+.+...-
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr 69 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMK 69 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 45567788999999999999887643
No 90
>PRK01490 tig trigger factor; Provisional
Probab=28.36 E-value=2.7e+02 Score=25.20 Aligned_cols=58 Identities=21% Similarity=0.203 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCcccCCCCEEEEeEEEEeCcEEEE
Q psy3761 21 PGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKILKKGDILNIDITVIKNGYYGD 100 (256)
Q Consensus 21 pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~Gd~v~id~g~~~~gy~~d 100 (256)
.-+|+.+|...+.+.... ++. ..+.++.++.||.|.+|+.+..+|-..+
T Consensus 130 ~~vtde~vd~~i~~l~~~-~a~------------------------------~~~~~~~~~~gD~V~vd~~~~~~g~~~~ 178 (435)
T PRK01490 130 VEVTDEDVDEELERLRKQ-FAT------------------------------LVPVERPAENGDRVTIDFVGSIDGEEFE 178 (435)
T ss_pred CCCCHHHHHHHHHHHHHh-CCc------------------------------cccccccCCCCCEEEEEEEEEECCEECc
Confidence 346888888888775554 221 1233466899999999998887764322
Q ss_pred ----EEEEEEeCC
Q psy3761 101 ----TSRMFYVGE 109 (256)
Q Consensus 101 ----~~Rt~~vG~ 109 (256)
-..+|.+|.
T Consensus 179 ~~~~~~~~~~lg~ 191 (435)
T PRK01490 179 GGKAEDFSLELGS 191 (435)
T ss_pred CCCCCceEEEEcC
Confidence 124555653
No 91
>PRK06646 DNA polymerase III subunit chi; Provisional
Probab=27.90 E-value=2.5e+02 Score=21.61 Aligned_cols=36 Identities=6% Similarity=-0.093 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q psy3761 2 RIAGKLSAEVLDYIAPFIKPGVTTEEINEICHNYMVN 38 (256)
Q Consensus 2 r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~ 38 (256)
+-++++++++++.-.+.+--.-++ +.+..+.+.+-.
T Consensus 16 ~~acrL~~Ka~~~G~rv~I~~~d~-~~~~~LD~~LWt 51 (154)
T PRK06646 16 KSILLLIEKCYYSDLKSVILTADA-DQQEMLNKNLWT 51 (154)
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCH-HHHHHHHHHhcC
Confidence 468899999888866654444444 455666676655
No 92
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=27.86 E-value=41 Score=22.78 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=21.1
Q ss_pred chhhHHHHHHHHHHhcCCeeecCccccc
Q psy3761 137 HLGDIGYAIQKHAEKYGYSVVREFCGHG 164 (256)
Q Consensus 137 ~~~ev~~~~~~~~~~~G~~~~~~~~GHg 164 (256)
...++...+.++|+++||.+.....|+-
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYl 43 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYL 43 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhhe
Confidence 4456777778889999999876666663
No 93
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=27.48 E-value=73 Score=23.74 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q psy3761 5 GKLSAEVLDYIAPFIKPGVTTEEINEIC 32 (256)
Q Consensus 5 ~~i~~~~~~~~~~~i~pG~te~el~~~~ 32 (256)
+.++..+-..+.+.+..|.|+.||...+
T Consensus 56 a~iA~dmR~~Vr~~i~~G~sd~eI~~~~ 83 (126)
T PRK10144 56 APVAVSMRHQVYSMVAEGKSEVEIIGWM 83 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4678888889999999999999988643
No 94
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=23.76 E-value=2.1e+02 Score=26.29 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.7
Q ss_pred cCCCCEEEEeEEEEeCcE
Q psy3761 80 LKKGDILNIDITVIKNGY 97 (256)
Q Consensus 80 l~~Gd~v~id~g~~~~gy 97 (256)
++.||.|+||+.+..+|=
T Consensus 158 a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 158 AENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cccCCEEEEEEEEEEcCe
Confidence 899999999999877664
No 95
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=22.92 E-value=2.2e+02 Score=22.41 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=35.1
Q ss_pred CCcccCCCCEEEEeEEEE-eCcEEEEEE-----EEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy3761 76 GNKILKKGDILNIDITVI-KNGYYGDTS-----RMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGIH 137 (256)
Q Consensus 76 ~~~~l~~Gd~v~id~g~~-~~gy~~d~~-----Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~ 137 (256)
+....+.||.|.+++-.. .+|-..|-+ .+|.+|.. .+..+++.++..|++|-+
T Consensus 82 ~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~~---------~vi~Gl~e~L~~Mk~Ge~ 140 (177)
T TIGR03516 82 EGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQQ---------DLFSGLRDGLKLMKEGET 140 (177)
T ss_pred CCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCCc---------chhHHHHHHHcCCCCCCE
Confidence 335678999999998766 466555544 35666641 244566777778888864
No 96
>PF09958 DUF2192: Uncharacterized protein conserved in archaea (DUF2192); InterPro: IPR018693 This family of various hypothetical archaeal proteins has no known function.
Probab=22.37 E-value=2.9e+02 Score=22.95 Aligned_cols=44 Identities=7% Similarity=0.032 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeeec
Q psy3761 113 VAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVVR 158 (256)
Q Consensus 113 ~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~ 158 (256)
-+++..+++.+.+..+++. -..+=+++-...++.+++.|..+++
T Consensus 5 l~r~RI~va~~l~~~il~~--~~~~R~~lv~~L~~~Y~~~gIeP~R 48 (231)
T PF09958_consen 5 LYRKRIEVATDLWSRILRG--EVLDREELVELLREVYEENGIEPFR 48 (231)
T ss_pred HHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHcCCCcCC
Confidence 3566777788888777776 6778899999999999999987654
No 97
>KOG4152|consensus
Probab=21.69 E-value=2.1e+02 Score=26.96 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=39.5
Q ss_pred CCCCEEEEeEEEEeCcEEEEEEEEEEeCCCC---HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhcCCeee
Q psy3761 81 KKGDILNIDITVIKNGYYGDTSRMFYVGEPS---LVAKRLSDISFECMWIGIVKIKPGIHLGDIGYAIQKHAEKYGYSVV 157 (256)
Q Consensus 81 ~~Gd~v~id~g~~~~gy~~d~~Rt~~vG~~~---~~~~~~~~~~~~a~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~ 157 (256)
-.||+- -++.-.|+.+|-+|.++||--. .---++|+. ++.+...+.+||-.+ +.|..++
T Consensus 74 vrGDiP---pgcAA~GfvcdGtrilvFGGMvEYGkYsNdLYEL--QasRWeWkrlkp~~p-------------~nG~pPC 135 (830)
T KOG4152|consen 74 VRGDIP---PGCAAFGFVCDGTRILVFGGMVEYGKYSNDLYEL--QASRWEWKRLKPKTP-------------KNGPPPC 135 (830)
T ss_pred hcCCCC---CchhhcceEecCceEEEEccEeeeccccchHHHh--hhhhhhHhhcCCCCC-------------CCCCCCC
Confidence 356543 3666789999999999996311 111123332 334444556666553 4566654
Q ss_pred cCccccccCc
Q psy3761 158 REFCGHGIGK 167 (256)
Q Consensus 158 ~~~~GHgiG~ 167 (256)
.++||+.-+
T Consensus 136 -PRlGHSFsl 144 (830)
T KOG4152|consen 136 -PRLGHSFSL 144 (830)
T ss_pred -CccCceeEE
Confidence 567887554
No 98
>PF11149 DUF2924: Protein of unknown function (DUF2924); InterPro: IPR021322 This entry is represented by Bacteriophage WO, Gp30. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This bacterial family of proteins has no known function.
Probab=21.56 E-value=2.4e+02 Score=21.28 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=25.1
Q ss_pred CCCeecCCCEEEEeeEEEcCCCceEEccCCceEEecCCCceeEEEEEEEEcCCCeEEcC
Q psy3761 183 TLEKLKTGMIFTVEPMINEGRKEIKEMSDGWTIKTKDRSLSAQWEHTVLVTKNGFEVLT 241 (256)
Q Consensus 183 ~~~~l~~gmv~~iep~~~~~~~~v~~~~~~~~~~~~~~~~~~~~edtv~Vt~~G~e~Lt 241 (256)
++..+.||.++.=| +.| .++.|.|++||.|.--
T Consensus 77 ~~~~~~pGt~LvRE---w~G-----------------------~~h~V~V~~dGfey~G 109 (136)
T PF11149_consen 77 DDRRPAPGTRLVRE---WNG-----------------------REHEVTVLEDGFEYQG 109 (136)
T ss_pred cccCCCCCcEEEEE---ECC-----------------------EEEEEEEeCCCEEECC
Confidence 45678999998876 322 5789999999988654
No 99
>PRK05473 hypothetical protein; Provisional
Probab=20.91 E-value=63 Score=22.24 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHHHhcCCeeecCccccc
Q psy3761 138 LGDIGYAIQKHAEKYGYSVVREFCGHG 164 (256)
Q Consensus 138 ~~ev~~~~~~~~~~~G~~~~~~~~GHg 164 (256)
..++...+.++|+++||.+.....|+-
T Consensus 20 v~eiL~~Vy~AL~EKGYNPinQiVGYl 46 (86)
T PRK05473 20 VREILTTVYDALEEKGYNPINQIVGYL 46 (86)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHhhh
Confidence 355666677788999999876666663
No 100
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=20.81 E-value=2.3e+02 Score=24.17 Aligned_cols=56 Identities=20% Similarity=0.165 Sum_probs=43.6
Q ss_pred EEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-chhhHHHHHHHHHHhcCCe
Q psy3761 97 YYGDTSRMFYVGEPSLVAKRLSDISFECMWIGIVKIKPGI-HLGDIGYAIQKHAEKYGYS 155 (256)
Q Consensus 97 y~~d~~Rt~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~~ 155 (256)
-.+=.+|..++ ++++++......+++..+.+.++-|. ...++-+.+.+.+++.++.
T Consensus 182 GlaiSSRN~~L---s~~~r~~A~~l~~~L~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 238 (277)
T cd00560 182 GLALSSRNVYL---SAEERKEALALYRALKAAAEAIAAGERDAEDIIAAARDVLEAAGFR 238 (277)
T ss_pred CceEeCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC
Confidence 33566777777 78899988888888888888888775 5677888888888887653
No 101
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=20.75 E-value=2.7e+02 Score=18.54 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=30.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCeeeeecCCeeeccCCCCcccCCCCEEEE
Q psy3761 19 IKPGVTTEEINEICHNYMVNIQNTIPAPLNYCPQKGGIPFPKSICTSVNDVVCHGIPGNKILKKGDILNI 88 (256)
Q Consensus 19 i~pG~te~el~~~~~~~~~~~~G~~~~~~~~~g~~~~~~~~~~v~~g~~~~~~h~~p~~~~l~~Gd~v~i 88 (256)
++.|.|-.|++..++..+.. + |-..+.. .+ ....+-+..|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~--~----------------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGD--G----------------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHh--c----------------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 56799999999988775644 1 2100111 11 223456788999999986
No 102
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=20.58 E-value=67 Score=19.61 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=24.0
Q ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q psy3761 104 MFYVGEPSLVAKRLSDISFECMWIGIVKIKP 134 (256)
Q Consensus 104 t~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp 134 (256)
+|....-+++.+++|+.+..-.+.++..++|
T Consensus 18 ~fal~T~d~~AK~~y~~~a~~l~~ii~~L~~ 48 (50)
T PF07870_consen 18 TFALQTQDQEAKQMYEQAAQQLEEIIQDLEP 48 (50)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHhHc
Confidence 3444556788889999998888888888776
No 103
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=20.02 E-value=1.1e+02 Score=20.70 Aligned_cols=35 Identities=26% Similarity=0.383 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhcC
Q psy3761 6 KLSAEVLDYIAPFIKPGVTTEEINEICHNYMVNIQN 41 (256)
Q Consensus 6 ~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~~G 41 (256)
+|+..+...+.+..+.++|..||...+...+.+ .|
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~-~~ 73 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALME-EG 73 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHT-ST
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHc-CC
Confidence 344444444333333499999999999998887 55
Done!