Query psy3766
Match_columns 470
No_of_seqs 234 out of 1167
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 16:43:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2isb_A Fumarase, FUM-1; NP_069 100.0 6.5E-71 2.2E-75 517.1 18.1 172 279-452 17-191 (192)
2 2qv6_A MJ0145, GTP cyclohydrol 65.7 3.6 0.00012 40.5 3.2 27 150-176 211-239 (268)
3 3fiu_A NH(3)-dependent NAD(+) 35.6 74 0.0025 30.1 6.9 48 122-174 3-55 (249)
4 1o6a_A Putative flagellar moto 34.0 15 0.00052 30.2 1.6 41 285-342 31-71 (96)
5 1ed7_A Chitinase A1, (CHBD-CHI 28.3 12 0.00041 26.9 -0.1 19 293-311 7-25 (45)
6 2znm_A Thiol:disulfide interch 26.2 1E+02 0.0034 26.8 5.7 49 12-67 134-184 (195)
7 1o9y_A HRCQ2; secretory protei 24.7 25 0.00084 28.3 1.2 41 285-342 27-67 (84)
8 3c8l_A FTSZ-like protein of un 24.0 81 0.0028 27.6 4.4 31 35-67 5-35 (122)
9 1xng_A NH(3)-dependent NAD(+) 24.0 2.2E+02 0.0076 26.7 8.0 38 130-172 10-49 (268)
10 1r6x_A ATP:sulfate adenylyltra 23.1 1.6E+02 0.0055 30.3 7.2 109 281-404 83-225 (395)
11 3uep_A YSCQ-C, type III secret 21.7 26 0.0009 29.0 0.8 41 285-342 31-71 (96)
12 3kw2_A Probable R-RNA methyltr 21.2 48 0.0016 31.9 2.7 146 291-449 30-203 (257)
No 1
>2isb_A Fumarase, FUM-1; NP_069927.1, fumarase of FUM-1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; HET: MSE; 1.66A {Archaeoglobus fulgidus} SCOP: c.8.9.1
Probab=100.00 E-value=6.5e-71 Score=517.07 Aligned_cols=172 Identities=35% Similarity=0.616 Sum_probs=167.7
Q ss_pred EEEEcCCCCHHHHhcCCCCCEEEEEEEEEEeehHHHHHHHHHHHcCCCCCcccCCCeEEEeCcCCCCCC-ceeeeccccc
Q psy3766 279 HYVNLNTLTKKEVSSWRSGEILLLNGKILTGRDAAHNRIQYMLSKGEKIPVNFNNRVIYYVGPINPVRN-EVIGPAGPTT 357 (470)
Q Consensus 279 ~~i~~~P~s~e~i~~L~vGD~V~LsG~i~taRDaah~ri~e~l~~ge~lP~dl~g~~I~h~GP~~~~~g-~~igs~GPTT 357 (470)
+++++ |+++|++++|++||+|||||+|||+||+||+||+|+|++|++||+||+|++||||||++++++ +++||+||||
T Consensus 17 ~~l~~-Plt~e~v~~L~vGD~V~LsG~i~taRDaAHkRl~e~l~~Ge~lP~dl~g~~Iyy~GP~~~k~~~~~igs~GPTT 95 (192)
T 2isb_A 17 YELRT-PLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWMEEGKELPFSFDKGVVYHCGPLVKKNDEWRVVSAGPTT 95 (192)
T ss_dssp EEEES-SCCHHHHHHCCTTCEEEEEEEEEECCHHHHHHHHHHHHHTCCCSSCCTTCEEECBCCEEEESSSEEEEECCBCB
T ss_pred EEeCC-CCCHHHHhhCCCCCEEEEEEEEEEEhHHHHHHHHHHHHcCCCCCcCCCCCEEEEecCCCCCCCCcEeeEECCCc
Confidence 66888 999999999999999999999999999999999999999999999999999999999976655 8999999999
Q ss_pred cccchhhHHHHHHHhCcEEEEecccCCHHHHHHHHhcCEEEEEccchHHHHHHhhceeeeeeeccCCCc-ceEEEEEEec
Q psy3766 358 ASRMDHFTNLILEKIGLIAMIGKAERSDKIIKLIKKQKIAYLVAVGGAAYLISKAIKSAKIICFEDLGM-EAIYEFNVEN 436 (470)
Q Consensus 358 S~Rmd~~~~~ll~~~Gv~~~IGKG~~~~~~~~a~k~~gavYl~~~GGaaal~~~~Ik~v~~v~~~dLG~-EAi~~leVed 436 (470)
|+|||+|+|.|++++|+++|||||+||+++++|||+| +|||+++||||||++++||++++|+|+|||| ||||+|+|||
T Consensus 96 S~RMd~y~~~ll~~~G~~~mIGKG~r~~~v~~a~k~~-avYl~avGGaaalla~~Ik~v~~v~~~dLGMpEAi~~leVed 174 (192)
T 2isb_A 96 SARMNPFTPKILEKVECMGIIGKGGMSEEVVEAMRGK-AAYFAFTGGAGALAAMSIKKVKGVVWEDLGMPEAVWLLEVER 174 (192)
T ss_dssp GGGGTTTHHHHHHHCSCEEEEEBSCCCHHHHHHHTTT-EEEEEECSCSSTTGGGGEEEEEEEECGGGCTTTSEEEEEEEE
T ss_pred hhhhhhhHHHHHHhCCcEEEEECCCCCHHHHHHHHhC-eEEEEcCcHHHHHHHhheeEEEEEeeccCCCccEEEEEEEEe
Confidence 9999999999999889999999999999999999999 9999999999999999999999999999997 9999999999
Q ss_pred c-cEEEEEcCCCCcccc
Q psy3766 437 M-PVTVAIDSLGKSIHI 452 (470)
Q Consensus 437 f-Pl~V~iDs~G~~ly~ 452 (470)
| |+||+||+||||||+
T Consensus 175 fGP~iV~iD~~Gn~ly~ 191 (192)
T 2isb_A 175 FGPCIVAIDAHGNSLYR 191 (192)
T ss_dssp EEEEEEEECTTSCBTTC
T ss_pred eeeEEEEEeCCCccccc
Confidence 9 999999999999997
No 2
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=65.73 E-value=3.6 Score=40.50 Aligned_cols=27 Identities=37% Similarity=0.369 Sum_probs=22.8
Q ss_pred CCeeEEEEcCCHHHHHHHHHHHh--cccc
Q psy3766 150 PGILGIGIGGTPEKAMLMAKKVL--MQDI 176 (470)
Q Consensus 150 P~ivGVGIGGt~d~aa~LaK~Al--lR~~ 176 (470)
.+-+|||+|.|+..|...|++|| .|.-
T Consensus 211 ~lkvGIGiG~TA~~Ae~~A~~ALe~~R~~ 239 (268)
T 2qv6_A 211 ELKAGIGIGRTAEDASNLADIGLEKIRGK 239 (268)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 35589999999999999999998 4543
No 3
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=35.58 E-value=74 Score=30.14 Aligned_cols=48 Identities=23% Similarity=0.363 Sum_probs=33.0
Q ss_pred cccccCCc---chHHHHHHHHhhhcCCCCCCCCeeEEEEcCCHHHHH--HHHHHHhcc
Q psy3766 122 KFAMLNPS---DSLVDWIMKTVPTMGAGWCPPGILGIGIGGTPEKAM--LMAKKVLMQ 174 (470)
Q Consensus 122 ~~~ml~P~---~~i~~fV~d~V~~aG~~~CPP~ivGVGIGGt~d~aa--~LaK~AllR 174 (470)
.+.|+.|. +.+++|+.|.|.+.|. . -|.||+-|..|.+. .|+++++..
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~~v~~~~~---~--~vvv~lSGGiDSsv~a~l~~~~~~~ 55 (249)
T 3fiu_A 3 IVKDFSPKEYSQKLVNWLSDSCMNYPA---E--GFVIGLSGGIDSAVAASLAVKTGLP 55 (249)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHTTTC---S--EEEEECCSSHHHHHHHHHHHHTTSC
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHhCC---C--CEEEEecCcHHHHHHHHHHHHhCCC
Confidence 34566665 4689999999999883 3 35688999988765 556666543
No 4
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=34.01 E-value=15 Score=30.25 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=33.0
Q ss_pred CCCHHHHhcCCCCCEEEEEEEEEEeehHHHHHHHHHHHcCCCCCcccCCCeEEEeCcC
Q psy3766 285 TLTKKEVSSWRSGEILLLNGKILTGRDAAHNRIQYMLSKGEKIPVNFNNRVIYYVGPI 342 (470)
Q Consensus 285 P~s~e~i~~L~vGD~V~LsG~i~taRDaah~ri~e~l~~ge~lP~dl~g~~I~h~GP~ 342 (470)
.++-.++.+|++||++-|.- .-++++.+...|+.+|++=+.
T Consensus 31 ~ltl~ell~L~~GdVI~Ld~-----------------~~~~~v~v~v~g~~i~~G~~g 71 (96)
T 1o6a_A 31 RMTLKRVLEMIHGSIIELDK-----------------LTGEPVDILVNGKLIARGEVV 71 (96)
T ss_dssp EEEHHHHHHCCTTCEEEEEE-----------------ETTCCEEEEETTEEEEEEEEE
T ss_pred EeEHHHHhCCCCCCEEEeCC-----------------CCCCcEEEEECCEEEEEEEEE
Confidence 45679999999999999982 124688889999999997443
No 5
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=28.30 E-value=12 Score=26.89 Aligned_cols=19 Identities=21% Similarity=0.483 Sum_probs=16.5
Q ss_pred cCCCCCEEEEEEEEEEeeh
Q psy3766 293 SWRSGEILLLNGKILTGRD 311 (470)
Q Consensus 293 ~L~vGD~V~LsG~i~taRD 311 (470)
..++||+|...|..|.+++
T Consensus 7 ~Y~~Gd~Vty~G~~Y~c~q 25 (45)
T 1ed7_A 7 AYTAGQLVTYNGKTYKCLQ 25 (45)
T ss_dssp EECTTCCEEETTEEECBCS
T ss_pred eEcCCCEEEECCeEEEEEe
Confidence 5689999999999997764
No 6
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=26.19 E-value=1e+02 Score=26.77 Aligned_cols=49 Identities=16% Similarity=0.022 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhcCCCcccccCCceEEEEEeCceeeecCC--CccHHHHHHHHHHHhhc
Q psy3766 12 AQILINSRMCAKEKRPICQDTGIVNVFLKIGMNVRFKGF--NGSIHDVINEGVRRGYT 67 (470)
Q Consensus 12 ~~ileN~~iA~~~~~PlCQDTG~~~~fv~iG~~v~~~G~--~~~l~~aI~egv~~a~~ 67 (470)
..+-+|.++|++.++ +|+|+|+| +....+.|. ...+.++|++.+.++-.
T Consensus 134 ~~v~~~~~~a~~~gv-----~gtPt~vi--ng~~~~~g~~~~~~l~~~i~~~l~~~~~ 184 (195)
T 2znm_A 134 AAALKMQKLTEQYRI-----DSTPTVIV--GGKYRVIFNNGFDGGVHTIKELVAKVRE 184 (195)
T ss_dssp HHHHHHHHHHHHTTC-----CSSSEEEE--TTTEEECCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-----CCCCeEEE--CCEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 556678888888775 69999886 344445542 12466777777766544
No 7
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=24.68 E-value=25 Score=28.26 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=32.2
Q ss_pred CCCHHHHhcCCCCCEEEEEEEEEEeehHHHHHHHHHHHcCCCCCcccCCCeEEEeCcC
Q psy3766 285 TLTKKEVSSWRSGEILLLNGKILTGRDAAHNRIQYMLSKGEKIPVNFNNRVIYYVGPI 342 (470)
Q Consensus 285 P~s~e~i~~L~vGD~V~LsG~i~taRDaah~ri~e~l~~ge~lP~dl~g~~I~h~GP~ 342 (470)
.++-.++.+|++||++-|.- ..++++.+...|+.+|++=+.
T Consensus 27 ~itl~ell~L~~GdVi~Ld~-----------------~~~e~v~i~vng~~~~~ge~g 67 (84)
T 1o9y_A 27 RLTLAELRRLDAGTILEVTG-----------------ISPGHATLCHGEQVVAEGELV 67 (84)
T ss_dssp EEEHHHHHTCCTTCEEEECS-----------------SCTTEEEEEETTEEEEEEEEE
T ss_pred eeEHHHHhcCCCCCEEEeCC-----------------CCCCCEEEEECCEEEEEEEEE
Confidence 45779999999999999971 124677788899999997443
No 8
>3c8l_A FTSZ-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.22A {Nostoc punctiforme}
Probab=24.02 E-value=81 Score=27.60 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=27.8
Q ss_pred eEEEEEeCceeeecCCCccHHHHHHHHHHHhhc
Q psy3766 35 VNVFLKIGMNVRFKGFNGSIHDVINEGVRRGYT 67 (470)
Q Consensus 35 ~~~fv~iG~~v~~~G~~~~l~~aI~egv~~a~~ 67 (470)
-.+|+|+|....+-| .+...|-.+||+.|..
T Consensus 5 kr~~iEmGmG~DlhG--qD~TkAA~RAvrDAI~ 35 (122)
T 3c8l_A 5 KRLIIEMGMGIDQHG--QEPTIAASRAVRNAIA 35 (122)
T ss_dssp EEEEEEEEEEEESSS--SCHHHHHHHHHHHHHT
T ss_pred EEEEEEecccccccC--ccHHHHHHHHHHHHHh
Confidence 479999999999987 6789999999999987
No 9
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=23.98 E-value=2.2e+02 Score=26.73 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=28.0
Q ss_pred chHHHHHHHHhhhcCCCCCCCCeeEEEEcCCHHHHH--HHHHHHh
Q psy3766 130 DSLVDWIMKTVPTMGAGWCPPGILGIGIGGTPEKAM--LMAKKVL 172 (470)
Q Consensus 130 ~~i~~fV~d~V~~aG~~~CPP~ivGVGIGGt~d~aa--~LaK~Al 172 (470)
+.+.+|+.+.+.+.|.. -+.||+-|..|.++ .++++++
T Consensus 10 ~~l~~~l~~~v~~~~~~-----~vvv~lSGGiDSsv~~~l~~~~~ 49 (268)
T 1xng_A 10 VYLCDFLEKEVQKRGFK-----KVVYGLSGGLDSAVVGVLCQKVF 49 (268)
T ss_dssp HHHHHHHHHHHHHTTCC-----CEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-----CEEEEccCcHHHHHHHHHHHHhC
Confidence 35788888888887633 27788999999776 5566665
No 10
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=23.12 E-value=1.6e+02 Score=30.32 Aligned_cols=109 Identities=12% Similarity=0.164 Sum_probs=67.6
Q ss_pred EEcCCCCHHHHhcCCCCCEEEEE-------EE-----EEEee-----------hHHHHHHHHHHHcCCCCCcccCCCeEE
Q psy3766 281 VNLNTLTKKEVSSWRSGEILLLN-------GK-----ILTGR-----------DAAHNRIQYMLSKGEKIPVNFNNRVIY 337 (470)
Q Consensus 281 i~~~P~s~e~i~~L~vGD~V~Ls-------G~-----i~taR-----------Daah~ri~e~l~~ge~lP~dl~g~~I~ 337 (470)
|+| +++++++++|+.||.|.|. |+ +|.-+ |.+|.-+...+++ . .-+|
T Consensus 83 I~L-~v~~e~~~~l~~g~~vaL~~~~g~~~ail~v~e~y~~dk~~~a~~vfg~d~~HPgV~~~~~~--------~-g~~~ 152 (395)
T 1r6x_A 83 ITL-DVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAEKVFRGDPEHPAISYLFNV--------A-GDYY 152 (395)
T ss_dssp CCE-EECHHHHHTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHCSCTTSHHHHHHHHT--------S-CSEE
T ss_pred EEE-eCCHHHHhhcCCCCEEEEEcCCCceEEEEEeeeeeccChHHHHHHHhCCCcCCccHHHHHhh--------c-CCEE
Confidence 556 6789999999999999994 22 23333 4455555444332 0 2356
Q ss_pred EeCcCC--CCCCceeeeccccccccchhh-HHHHHHHhCcEEEEecccCC-------HHHHHHHHh-cCEEEEEccch
Q psy3766 338 YVGPIN--PVRNEVIGPAGPTTASRMDHF-TNLILEKIGLIAMIGKAERS-------DKIIKLIKK-QKIAYLVAVGG 404 (470)
Q Consensus 338 h~GP~~--~~~g~~igs~GPTTS~Rmd~~-~~~ll~~~Gv~~~IGKG~~~-------~~~~~a~k~-~gavYl~~~GG 404 (470)
-+|++. ..+. -++-.+.|+.|- +...+++.|-+-++|=.-|+ +...++..+ ...+.+..++|
T Consensus 153 vgG~v~~l~~~~-----~~df~~~r~tP~e~R~~f~~~gw~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllhPlvG 225 (395)
T 1r6x_A 153 VGGSLEAIQLPQ-----HYDYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVG 225 (395)
T ss_dssp EEEEEEESCCCC-----CCSSTTCSCCHHHHHHHHHHTTCCCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCS
T ss_pred EEEEEEEEecCC-----cCCchhhcCCHHHHHHHHHhcCCCcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEEECCC
Confidence 677753 1111 234457787643 45677778999999966665 333444444 66788888877
No 11
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=21.69 E-value=26 Score=29.02 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=33.0
Q ss_pred CCCHHHHhcCCCCCEEEEEEEEEEeehHHHHHHHHHHHcCCCCCcccCCCeEEEeCcC
Q psy3766 285 TLTKKEVSSWRSGEILLLNGKILTGRDAAHNRIQYMLSKGEKIPVNFNNRVIYYVGPI 342 (470)
Q Consensus 285 P~s~e~i~~L~vGD~V~LsG~i~taRDaah~ri~e~l~~ge~lP~dl~g~~I~h~GP~ 342 (470)
.++-.++.+|++||++-|+-. .++++.+...|+.+|++=+.
T Consensus 31 ~itl~ell~L~~GdVI~Ld~~-----------------~~~~v~i~vng~~i~~Ge~g 71 (96)
T 3uep_A 31 ILDWHTLTSLEPGSLIDLTTP-----------------VDGEVRLLANGRLLGHGRLV 71 (96)
T ss_dssp EEEHHHHHHCCTTCEEEEEEE-----------------SSCEEEEEETTEEEEEEEEE
T ss_pred eeeHHHHhcCCCCCEEEeCCC-----------------CCCcEEEEECCEEEEEEEEE
Confidence 456799999999999999842 24677788999999997554
No 12
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=21.18 E-value=48 Score=31.94 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=76.3
Q ss_pred HhcCCCCCEEEEE---EEEEEeehHHHHHHHHHHHcCCCCCcccCCCeEEEeCcCCCCCCceeeeccccc-cccchhhHH
Q psy3766 291 VSSWRSGEILLLN---GKILTGRDAAHNRIQYMLSKGEKIPVNFNNRVIYYVGPINPVRNEVIGPAGPTT-ASRMDHFTN 366 (470)
Q Consensus 291 i~~L~vGD~V~Ls---G~i~taRDaah~ri~e~l~~ge~lP~dl~g~~I~h~GP~~~~~g~~igs~GPTT-S~Rmd~~~~ 366 (470)
+..+++||.|.+. |..|.++=. + +++. . +.-+++-..-+.+..+-......|+.- ..|||-.++
T Consensus 30 VLRl~~Gd~v~l~dg~g~~~~a~I~------~-i~~~-~----~~~~i~~~~~~~~e~~~~i~L~~al~K~~dr~d~iiq 97 (257)
T 3kw2_A 30 VLRMQAGDRLRLTDGRGSFFDAVIE------T-ADRK-S----CYVSVCGQESWQKPWRDRITIAIAPTKQSERMEWMLE 97 (257)
T ss_dssp TSCCCTTCEEEEECSBSEEEEEEEE------E-ECSS-C----EEEEEEEEEECCCSSCSCEEEEECCCSSHHHHHHHHH
T ss_pred hccCCCCCEEEEEECCCCEEEEEEE------E-eeCC-E----EEEEEEEecccCCCCCCceEEEEecCCCcchHHHHHH
Confidence 6789999999996 788877411 0 1110 0 000112111111222334555667766 589998898
Q ss_pred HHHHHhCcEEEEe-cccCC-----------HHHHHHHHhcCEEEEEccc---hHHHHHHh-hceeeeeeec--cCC--Cc
Q psy3766 367 LILEKIGLIAMIG-KAERS-----------DKIIKLIKKQKIAYLVAVG---GAAYLISK-AIKSAKIICF--EDL--GM 426 (470)
Q Consensus 367 ~ll~~~Gv~~~IG-KG~~~-----------~~~~~a~k~~gavYl~~~G---Gaaal~~~-~Ik~v~~v~~--~dL--G~ 426 (470)
+.-+ +||.-++= .-.|| .-+++|+++.+.-++=.+- --..++.. .-.....++| ++. ++
T Consensus 98 KatE-LGV~~I~p~~s~rs~k~~~k~eRw~~I~~eAaeQs~R~~~P~v~~~~~~~~~l~~~~~~~~~li~~~~e~~~~~~ 176 (257)
T 3kw2_A 98 KLVE-IGVDEVVFIESEHSERRRIKAERLERIAISAMKQSLKASFPVIRVNIPIQTVIADTPKAAVRLIAYVDEAVRAEI 176 (257)
T ss_dssp HHHH-HCCSEEEEEECTTSCCSCCCHHHHHHHHHHHHHHTTCSBCCEEEEEEEHHHHHHHSCTTSEEEEECCCTTCC---
T ss_pred HHHh-hCCCEEEEEEeecchhhhhhHHHHHHHHHHHHHHcCCCcCCEecCcCCHHHHHhhccccCCEEEEEccccccccc
Confidence 8888 79987773 11111 1367899998876643221 23334433 1223456666 331 11
Q ss_pred ---ceEEE-EEEecccEEEEEcCCCCc
Q psy3766 427 ---EAIYE-FNVENMPVTVAIDSLGKS 449 (470)
Q Consensus 427 ---EAi~~-leVedfPl~V~iDs~G~~ 449 (470)
..+.. +.-..=++.++|-.+|+=
T Consensus 177 ~~~~~l~~~~~~~~~~v~l~IGPEGGf 203 (257)
T 3kw2_A 177 TQGRGYPSDFYHVGQDVLILIGPEGDF 203 (257)
T ss_dssp --CCCCGGGTCCTTSCEEEEECCTTCC
T ss_pred ccccchhHhhccCCCcEEEEECCCCCC
Confidence 00000 000012688888888873
Done!