Your job contains 1 sequence.
>psy3767
MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM
IMLGKPIEDTITAIKKNIKKIPKIIYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ
RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQDSFINGLLDCSYY
TKPRIYLNMEVPIVLLSGNHKKIKKWKRKNSLKITNKKRPDLIIKARKNKFLTCTDEEFL
KKINKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3767
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_1359 - symbol:SO_1359 "tRNA (guanine-N1)-meth... 538 7.2e-52 1
UNIPROTKB|P0A873 - symbol:trmD "TrmD" species:83333 "Esch... 523 2.8e-50 1
UNIPROTKB|Q9KUF8 - symbol:trmD "tRNA (guanine-N(1)-)-meth... 523 2.8e-50 1
TIGR_CMR|VC_0563 - symbol:VC_0563 "tRNA (guanine-N1)-meth... 523 2.8e-50 1
TIGR_CMR|CPS_4067 - symbol:CPS_4067 "tRNA (guanine-N1)-me... 519 7.4e-50 1
TIGR_CMR|CBU_0443 - symbol:CBU_0443 "tRNA (guanine-N1)-me... 480 1.0e-45 1
TIGR_CMR|BA_3979 - symbol:BA_3979 "tRNA (guanine-N1)-meth... 459 1.7e-43 1
TIGR_CMR|GSU_0646 - symbol:GSU_0646 "tRNA (guanine-N1)-me... 455 4.5e-43 1
TIGR_CMR|DET_0339 - symbol:DET_0339 "tRNA (guanine-N1)-me... 445 5.2e-42 1
TIGR_CMR|CHY_1430 - symbol:CHY_1430 "tRNA (guanine-N1)-me... 435 5.9e-41 1
TIGR_CMR|CJE_0813 - symbol:CJE_0813 "tRNA (guanine-N1)-me... 408 4.3e-38 1
TIGR_CMR|ECH_0003 - symbol:ECH_0003 "tRNA (guanine-N1)-me... 406 7.0e-38 1
TIGR_CMR|NSE_0896 - symbol:NSE_0896 "tRNA (guanine-N1)-me... 397 6.3e-37 1
TIGR_CMR|APH_1267 - symbol:APH_1267 "tRNA (guanine-N1)-me... 394 1.3e-36 1
TIGR_CMR|SPO_3259 - symbol:SPO_3259 "tRNA (guanine-N1)-me... 388 5.7e-36 1
UNIPROTKB|P66968 - symbol:trmD "tRNA (guanine-N(1)-)-meth... 323 4.4e-29 1
>TIGR_CMR|SO_1359 [details] [associations]
symbol:SO_1359 "tRNA (guanine-N1)-methyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
ProtClustDB:PRK00026 Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
OMA:NRYDLYL RefSeq:NP_716979.1 ProteinModelPortal:Q8CX44 SMR:Q8CX44
GeneID:1169180 KEGG:son:SO_1359 PATRIC:23522372 Uniprot:Q8CX44
Length = 248
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 110/239 (46%), Positives = 149/239 (62%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M VITLFPEMF A+T G+T RA + L+ WNPR+F+ + + +DD PYGGG GM
Sbjct: 1 MWLGVITLFPEMFRAVTDFGVTGRAVKNGLLELHTWNPRDFTHDRHSTVDDRPYGGGPGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M+ +P+ D I A Y+SPQG+KL + +L K S LIL+CGRY+ ID+
Sbjct: 61 LMMVQPLRDAIHAARAAAGEDAKVIYLSPQGRKLDQQGVTELAKSSRLILVCGRYEGIDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNM-QDSFINGLLDCSY 179
R + +DEE SVGD++LSGGELPAM +IDA+ RL+P VL + + QDSF +GLLDC +
Sbjct: 121 RIIQTEVDEEWSVGDYVLSGGELPAMTMIDAVSRLVPGVLGKQASAEQDSFSDGLLDCPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEE 238
YT+P ++VP VLLSGNH T +RP+L+ +N L TDE+
Sbjct: 181 YTRPESLDGLDVPAVLLSGNHEQIRLWRLQQSLGRTLLRRPELL----QN--LALTDEQ 233
>UNIPROTKB|P0A873 [details] [associations]
symbol:trmD "TrmD" species:83333 "Escherichia coli K-12"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0052906 "tRNA
(guanine(37)-N(1))-methyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=IEA;IDA]
[GO:0030488 "tRNA methylation" evidence=IMP] HAMAP:MF_00605
InterPro:IPR002649 InterPro:IPR023148 PIRSF:PIRSF000386
Pfam:PF01746 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
InterPro:IPR016009 EMBL:X01818 GO:GO:0009019 GO:GO:0052906
eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554 OMA:PRLLMSP
ProtClustDB:PRK00026 Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
PIR:A30380 RefSeq:NP_417098.1 RefSeq:YP_490830.1 PDB:1P9P
PDBsum:1P9P ProteinModelPortal:P0A873 SMR:P0A873 DIP:DIP-48264N
IntAct:P0A873 PRIDE:P0A873 EnsemblBacteria:EBESCT00000001239
EnsemblBacteria:EBESCT00000014588 GeneID:12934078 GeneID:947099
KEGG:ecj:Y75_p2555 KEGG:eco:b2607 PATRIC:32120613 EchoBASE:EB1016
EcoGene:EG11023 BioCyc:EcoCyc:EG11023-MONOMER
BioCyc:ECOL316407:JW2588-MONOMER BioCyc:MetaCyc:EG11023-MONOMER
EvolutionaryTrace:P0A873 Genevestigator:P0A873 Uniprot:P0A873
Length = 255
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 102/224 (45%), Positives = 141/224 (62%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M +I+LFPEMF AIT G+T RA + S+ W+PR+F+ + +R +DD PYGGG GM
Sbjct: 1 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M+ +P+ D I A Y+SPQG+KL + +L LIL+CGRY+ ID+
Sbjct: 61 LMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNM-QDSFINGLLDCSY 179
R + IDEE S+GD++LSGGELPAM LID++ R +P VL ++ + +DSF GLLDC +
Sbjct: 121 RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLI 223
YT+P + MEVP VLLSGNH T +RP+L+
Sbjct: 181 YTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELL 224
>UNIPROTKB|Q9KUF8 [details] [associations]
symbol:trmD "tRNA (guanine-N(1)-)-methyltransferase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00605
InterPro:IPR002649 InterPro:IPR023148 PIRSF:PIRSF000386
Pfam:PF01746 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0006400 InterPro:IPR016009 GO:GO:0052906
eggNOG:COG0336 KO:K00554 OMA:PRLLMSP ProtClustDB:PRK00026
Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088 PIR:C82307
RefSeq:NP_230214.1 ProteinModelPortal:Q9KUF8 SMR:Q9KUF8
DNASU:2615240 GeneID:2615240 KEGG:vch:VC0563 PATRIC:20080244
Uniprot:Q9KUF8
Length = 247
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 103/247 (41%), Positives = 153/247 (61%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M +++LFPEMF ++T G+T +A +K S+ WNPR+F+ + R +DD PYGGG GM
Sbjct: 1 MWVGIVSLFPEMFRSVTDFGVTGQAVKKGLLSVEAWNPRDFAHDKRRTVDDKPYGGGPGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M+ +P+ D I A Y+SPQG+KL + +L + NLIL+CGRY+ +D+
Sbjct: 61 LMMVQPLRDAIHAAKQASPGKTKVIYLSPQGRKLDQQGVEELAQNQNLILICGRYEGVDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQ-DSFINGLLDCSY 179
R +++ +DEE S+GDF+++GGELPAM LID++ R +P VL + + + DSF NGLLDC +
Sbjct: 121 RIIESEVDEEWSIGDFVMTGGELPAMTLIDSVSRFIPGVLGDFASAEEDSFANGLLDCPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEEF 239
YT+P + EVP VL SGNH T +RP+L+ +N LT E+
Sbjct: 181 YTRPEVLDGKEVPAVLKSGNHEDIRRWRLKQSLGRTWLRRPELL----ENLALTDEQEQL 236
Query: 240 LKKINKK 246
L + K+
Sbjct: 237 LTEYIKE 243
>TIGR_CMR|VC_0563 [details] [associations]
symbol:VC_0563 "tRNA (guanine-N1)-methyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00605 InterPro:IPR002649
InterPro:IPR023148 PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006400
InterPro:IPR016009 GO:GO:0052906 eggNOG:COG0336 KO:K00554
OMA:PRLLMSP ProtClustDB:PRK00026 Gene3D:1.10.1270.20
TIGRFAMs:TIGR00088 PIR:C82307 RefSeq:NP_230214.1
ProteinModelPortal:Q9KUF8 SMR:Q9KUF8 DNASU:2615240 GeneID:2615240
KEGG:vch:VC0563 PATRIC:20080244 Uniprot:Q9KUF8
Length = 247
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 103/247 (41%), Positives = 153/247 (61%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M +++LFPEMF ++T G+T +A +K S+ WNPR+F+ + R +DD PYGGG GM
Sbjct: 1 MWVGIVSLFPEMFRSVTDFGVTGQAVKKGLLSVEAWNPRDFAHDKRRTVDDKPYGGGPGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M+ +P+ D I A Y+SPQG+KL + +L + NLIL+CGRY+ +D+
Sbjct: 61 LMMVQPLRDAIHAAKQASPGKTKVIYLSPQGRKLDQQGVEELAQNQNLILICGRYEGVDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQ-DSFINGLLDCSY 179
R +++ +DEE S+GDF+++GGELPAM LID++ R +P VL + + + DSF NGLLDC +
Sbjct: 121 RIIESEVDEEWSIGDFVMTGGELPAMTLIDSVSRFIPGVLGDFASAEEDSFANGLLDCPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEEF 239
YT+P + EVP VL SGNH T +RP+L+ +N LT E+
Sbjct: 181 YTRPEVLDGKEVPAVLKSGNHEDIRRWRLKQSLGRTWLRRPELL----ENLALTDEQEQL 236
Query: 240 LKKINKK 246
L + K+
Sbjct: 237 LTEYIKE 243
>TIGR_CMR|CPS_4067 [details] [associations]
symbol:CPS_4067 "tRNA (guanine-N1)-methyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
RefSeq:YP_270722.1 ProteinModelPortal:Q47WV0 SMR:Q47WV0
STRING:Q47WV0 GeneID:3521532 KEGG:cps:CPS_4067 PATRIC:21471009
BioCyc:CPSY167879:GI48-4080-MONOMER Uniprot:Q47WV0
Length = 253
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 113/255 (44%), Positives = 152/255 (59%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M VI+LFPEMF+AIT+ G+T RA +LWNPR+F+ + +R +DD PYGGG GM
Sbjct: 1 MWIGVISLFPEMFNAITEYGVTGRAIRNGLIDFHLWNPRDFTHDKHRTVDDRPYGGGPGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXX---YMSPQGKKLTHNIIIKLLKESNLILLCGRYQA 117
+M+ +P+ D I A Y+SPQG+KL + +L + L+ + GRY+
Sbjct: 61 LMMVQPLRDAIAAARKAAEVNGGKAKVIYLSPQGRKLDQQGVSELAQHDRLVFIAGRYEG 120
Query: 118 IDQRFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNM-QDSFINGLLD 176
ID+R + + IDEE SVGD+ILSGGELPAM +IDA+ RL+P VL +K + QDSF NGLLD
Sbjct: 121 IDERLIASDIDEEWSVGDYILSGGELPAMNVIDAVARLVPGVLGHKESAEQDSFSNGLLD 180
Query: 177 CSYYTKPRIYLN-----MEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKF 231
C +YT+P + M VP VLLSGNH T +RP+L+ N
Sbjct: 181 CPHYTRPEVLTTPQGDEMSVPKVLLSGNHEHIRLWRQEQSLLRTWTRRPELL----NNLA 236
Query: 232 LTCTDEEFLKKINKK 246
LT E+ L I K+
Sbjct: 237 LTAEQEKALTLIKKQ 251
>TIGR_CMR|CBU_0443 [details] [associations]
symbol:CBU_0443 "tRNA (guanine-N1)-methyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP ProtClustDB:PRK00026 Gene3D:1.10.1270.20
TIGRFAMs:TIGR00088 RefSeq:NP_819480.1 ProteinModelPortal:Q820X1
SMR:Q820X1 GeneID:1208327 KEGG:cbu:CBU_0443 PATRIC:17929577
BioCyc:CBUR227377:GJ7S-441-MONOMER Uniprot:Q820X1
Length = 246
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 100/220 (45%), Positives = 143/220 (65%)
Query: 5 VITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGMIMLG 64
VITLFP+MF A+ +SG+ RA ++ + +L+ WNPR+++++ +R +DD PYGGG GM+M
Sbjct: 7 VITLFPQMFDAL-KSGVIGRALKQDRLTLSCWNPRDYATDPHRTVDDRPYGGGPGMVMKF 65
Query: 65 KPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQRFLD 124
+P+ + A +++PQGK LT I+ + + S LILL GRY+ ID+R ++
Sbjct: 66 EPLALALKAAKAQLGENTKVIHLTPQGKLLTQAIVREKIHASPLILLAGRYEGIDERLIE 125
Query: 125 NFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNM-QDSFINGLLDCSYYTKP 183
+DEE S+GD+ILSGGELPAM+LIDA+ RLLP VL +K + QDSF GLLD +YT+P
Sbjct: 126 AEVDEEWSIGDYILSGGELPAMVLIDAMTRLLPGVLGHKDSASQDSFTAGLLDYPHYTRP 185
Query: 184 RIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLI 223
+ VP VLLSG+H T ++R DLI
Sbjct: 186 EKIADRPVPSVLLSGDHEAISRWRLKQSLGRTWQRRQDLI 225
>TIGR_CMR|BA_3979 [details] [associations]
symbol:BA_3979 "tRNA (guanine-N1)-methyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR016009 GO:GO:0052906 eggNOG:COG0336
HOGENOM:HOG000016242 KO:K00554 OMA:PRLLMSP ProtClustDB:PRK00026
Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088 RefSeq:NP_846221.1
RefSeq:YP_020618.1 RefSeq:YP_029943.1 ProteinModelPortal:Q81JG7
DNASU:1086804 EnsemblBacteria:EBBACT00000011685
EnsemblBacteria:EBBACT00000018552 EnsemblBacteria:EBBACT00000019488
GeneID:1086804 GeneID:2820018 GeneID:2848345 KEGG:ban:BA_3979
KEGG:bar:GBAA_3979 KEGG:bat:BAS3692
BioCyc:BANT260799:GJAJ-3750-MONOMER
BioCyc:BANT261594:GJ7F-3867-MONOMER Uniprot:Q81JG7
Length = 244
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 89/246 (36%), Positives = 152/246 (61%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+ D++TLFP+MF+ + S I ++A EK+ L + N R+++++ + +DDYPYGGG GM
Sbjct: 1 MKIDILTLFPDMFTGVFGSSILKKAQEKEAVELRVVNFRDYTTSKHNSVDDYPYGGGAGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
++ +PI D + M PQG++ T +L +E +LI +CG Y+ D+
Sbjct: 61 VLTPQPIFDAVEDLTKETERKPRVVLMCPQGERFTQKKAEELAEEEHLIFVCGHYEGYDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLN-MQDSFINGLLDCSY 179
R ++ + +EIS+GD++L+GGEL +M++ D++VRLLP VL N + ++DSF GLL+ +
Sbjct: 121 RIREHLVTDEISIGDYVLTGGELASMVITDSVVRLLPGVLGNHASQVEDSFSTGLLEHPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEEF 239
YT+P + M+VP VL+SGNH T +RPDL+ + + L+ ++++
Sbjct: 181 YTRPADFRGMKVPDVLMSGNHKNIDEWRHKESLRRTYTRRPDLL----EERELSKQEKKW 236
Query: 240 LKKINK 245
L++I +
Sbjct: 237 LEQIKE 242
>TIGR_CMR|GSU_0646 [details] [associations]
symbol:GSU_0646 "tRNA (guanine-N1)-methyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS] [GO:0030488
"tRNA methylation" evidence=ISS] HAMAP:MF_00605 InterPro:IPR002649
InterPro:IPR023148 PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737
GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR016009 GO:GO:0052906 eggNOG:COG0336
HOGENOM:HOG000016242 KO:K00554 OMA:PRLLMSP ProtClustDB:PRK00026
Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088 RefSeq:NP_951703.1
ProteinModelPortal:Q74FG3 GeneID:2687328 KEGG:gsu:GSU0646
PATRIC:22024039 BioCyc:GSUL243231:GH27-656-MONOMER Uniprot:Q74FG3
Length = 245
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 94/247 (38%), Positives = 148/247 (59%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+FD++TLFP MF I RRA E+ ++L N R+++++ +R +DD PYGGG GM
Sbjct: 1 MKFDILTLFPAMFDGPLTESIIRRAVERGFVDISLHNIRDYATDRHRVVDDAPYGGGDGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M +P+ I A +P+G++ H+ +L LI++CGRY+ ID+
Sbjct: 61 VMKVEPLAACIEAVKAERPAARVIL-TTPRGRRFDHDAARELAGYEELIIVCGRYEGIDE 119
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQ-DSFINGLLDCSY 179
R D F+D+E S+GDF+L+GGEL AM++IDA++R +P VL + + + DSF +GLL+
Sbjct: 120 RVRDLFVDDEFSIGDFVLTGGELAAMVMIDAVIRFIPGVLGSPGSAEYDSFADGLLEYPQ 179
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEEF 239
YT+P + ++VP VLLSGNH +T + RPDL+ KA L+ +D +
Sbjct: 180 YTRPVEFRGVQVPGVLLSGNHAEISRWRRQKALELTRRVRPDLLHKAE----LSSSDRDC 235
Query: 240 LKKINKK 246
L + ++
Sbjct: 236 LAMLERE 242
>TIGR_CMR|DET_0339 [details] [associations]
symbol:DET_0339 "tRNA (guanine-N1)-methyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:CP000027 GenomeReviews:CP000027_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP ProtClustDB:PRK00026 Gene3D:1.10.1270.20
TIGRFAMs:TIGR00088 RefSeq:YP_181086.1 ProteinModelPortal:Q3Z9L3
STRING:Q3Z9L3 GeneID:3230380 KEGG:det:DET0339 PATRIC:21607747
BioCyc:DETH243164:GJNF-339-MONOMER Uniprot:Q3Z9L3
Length = 248
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 91/247 (36%), Positives = 143/247 (57%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+ DV+TLFPEMF + + I +RA +K L + N R+FS + + +DD PYGGG GM
Sbjct: 1 MKIDVLTLFPEMFQSPFEESIFKRAADKNLVRLEIHNFRDFSHDKHHAVDDTPYGGGAGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
++ +P+ + + A +SPQG+ ++ +L LI++CG Y+ D+
Sbjct: 61 LLKPEPLFEAVEAVMEKDPTPAPVILLSPQGRTFNQSVARELANHQRLIIICGHYEGFDE 120
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQ-DSFINGLLDCSY 179
R ++ +EIS+GDF+L+GGEL AM++IDA+ RL+P VL + + + DS NGLL+ +
Sbjct: 121 RVREHLATDEISIGDFVLTGGELAAMVVIDAVSRLIPGVLGSDDSSESDSHSNGLLEHPH 180
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNKFLTCTDEEF 239
YT+P ++ ++P VLLSGNH T K+RPD++ K +K +E
Sbjct: 181 YTRPPVFRGWDIPEVLLSGNHARIDRWRRKESLRRTLKRRPDMLEKITLSKADRKLIDEI 240
Query: 240 LKKINKK 246
L + N K
Sbjct: 241 LAEENPK 247
>TIGR_CMR|CHY_1430 [details] [associations]
symbol:CHY_1430 "tRNA (guanine-N1)-methyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
RefSeq:YP_360262.1 ProteinModelPortal:Q3AC72 STRING:Q3AC72
PRIDE:Q3AC72 GeneID:3728260 KEGG:chy:CHY_1430 PATRIC:21275991
BioCyc:CHYD246194:GJCN-1429-MONOMER Uniprot:Q3AC72
Length = 253
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 92/228 (40%), Positives = 140/228 (61%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+ D++TLFPEMF S I ++A EK ++N N R+F+++ + + DD PYGGG GM
Sbjct: 1 MKIDILTLFPEMFYGPLNSSILKKAQEKGIITINYINIRDFTTDRHHQADDKPYGGGAGM 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M +PI I A +SPQG+K + +L ++ +LI +CG Y+ ID+
Sbjct: 61 VMKVEPI---IKAYEAIPKNNSFTIMLSPQGRKFNQKLARELSQKEHLIFICGHYEGIDE 117
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQD-SFINGLLDCSY 179
R +DEEIS+GD+IL+GGE+ AM++IDA+ RL+P VL ++++ ++ SF + LL+ +
Sbjct: 118 RVRQLIVDEEISIGDYILTGGEIAAMVIIDAVARLVPGVLGDEVSAEEESFSDQLLEYPH 177
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKAR 227
YT+PR + +EVP VLLSGNH T +R DL+ K R
Sbjct: 178 YTRPRNFRGLEVPEVLLSGNHKKIDLWRKKQSLLNTLFRRRDLL-KVR 224
>TIGR_CMR|CJE_0813 [details] [associations]
symbol:CJE_0813 "tRNA (guanine-N1)-methyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:CP000025 GenomeReviews:CP000025_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
ProtClustDB:PRK00026 Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
RefSeq:YP_178817.1 ProteinModelPortal:Q5HV68 STRING:Q5HV68
GeneID:3230763 KEGG:cjr:CJE0813 PATRIC:20043371 OMA:NRYDLYL
BioCyc:CJEJ195099:GJC0-828-MONOMER Uniprot:Q5HV68
Length = 234
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 85/235 (36%), Positives = 133/235 (56%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+F ++LFP + Q I RA EKK + LN +NPR+FS N+Y K+DDY GGG G+
Sbjct: 1 MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKNSYHKVDDYKIGGGAGL 60
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M +P+ + + + +++P GK +L K+ +++ +CGRY+ ID+
Sbjct: 61 LMQAEPMYEVLRSIQEKKENPYFI-FLNPSGKTFNQKDAKRLSKKEHIVFVCGRYEGIDE 119
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNM-QDSFINGLLDCSY 179
R L+ F +E S+GDFIL+GGELPA+++ DAI+R + VL N ++ ++SF N LL+
Sbjct: 120 RVLEIFANEIFSIGDFILTGGELPALVMCDAILRNVNGVLGNMESLKEESFENNLLEAPA 179
Query: 180 YTKPRIY--LNME--VPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLIIKARKNK 230
++KP I+ N + P L GNH T RPDL ++ + K
Sbjct: 180 FSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCKTKFFRPDLFLEHERKK 234
>TIGR_CMR|ECH_0003 [details] [associations]
symbol:ECH_0003 "tRNA (guanine-N1)-methyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003723 InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP ProtClustDB:PRK00026 Gene3D:1.10.1270.20
TIGRFAMs:TIGR00088 RefSeq:YP_506838.1 ProteinModelPortal:Q2GI95
STRING:Q2GI95 GeneID:3927444 KEGG:ech:ECH_0003 PATRIC:20575579
BioCyc:ECHA205920:GJNR-3-MONOMER Uniprot:Q2GI95
Length = 235
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 90/221 (40%), Positives = 131/221 (59%)
Query: 4 DVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGMIML 63
+V+T+FPEMF I RA K ++LN+ + R+F+ + ++ +DD PYGGG GMIM
Sbjct: 6 NVLTIFPEMFPGTLSHSIIGRALNKGLWNLNVIDIRSFAKDKHKTVDDRPYGGGPGMIMK 65
Query: 64 GKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQRFL 123
I I YMSP G KL +I +L SN+ +LCGR++ ID+R L
Sbjct: 66 ADVIGSAIDEVLSKNKNTKLI-YMSPSGIKLNQDISGQLTHFSNITILCGRFEGIDKRIL 124
Query: 124 DNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQD-SF-INGLLDCSYYT 181
D + EIS+GD+ILSGGE+ M+LI+ VRL+P V++N +++D SF ++ L+ YT
Sbjct: 125 DFYDFHEISIGDYILSGGEVACMVLIETCVRLIPGVVSNTQSIRDESFTLDYKLEYPQYT 184
Query: 182 KPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDL 222
+P + +EVP VLLSGNH IT ++RP+L
Sbjct: 185 RPAKWRGLEVPDVLLSGNHKKINLWKANQSYCITKQRRPEL 225
>TIGR_CMR|NSE_0896 [details] [associations]
symbol:NSE_0896 "tRNA (guanine-N1)-methyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0003723
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
RefSeq:YP_506762.1 ProteinModelPortal:Q2GCN4 STRING:Q2GCN4
GeneID:3931442 KEGG:nse:NSE_0896 PATRIC:22681783
ProtClustDB:CLSK2527740 BioCyc:NSEN222891:GHFU-899-MONOMER
Uniprot:Q2GCN4
Length = 225
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/224 (35%), Positives = 127/224 (56%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+F V+T+FPE+F + R +SL + R F+ N+ ++DD PYGGG GM
Sbjct: 1 MRFVVLTMFPEVFPGPLGVSVIGRGLANGYWSLEVIPIRRFAVNS--RVDDAPYGGGPGM 58
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M + + ++SP+G K N L++ N++L+CGR++ +DQ
Sbjct: 59 VMRADVLGEAFE-YANSTYQIKRRIFLSPRGTKFVQNSTANLVEADNVLLICGRFEGVDQ 117
Query: 121 RFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQ-DSFINGLLDCSY 179
RFL+ + EE+SVGD++LSGGE+ AM +ID+ VR +P VL N +++ +SF+ L+ +
Sbjct: 118 RFLNYYNVEELSVGDYVLSGGEIAAMAVIDSCVRCIPGVLGNLQSLECESFVGSSLEYDH 177
Query: 180 YTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLI 223
YT+P + + VP VL+SGNH T + RPDL+
Sbjct: 178 YTRPNSWKGLSVPEVLMSGNHRKISEWRVNSAATATGRNRPDLV 221
>TIGR_CMR|APH_1267 [details] [associations]
symbol:APH_1267 "tRNA (guanine-N1)-methyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS] [GO:0030488
"tRNA methylation" evidence=ISS] HAMAP:MF_00605 InterPro:IPR002649
InterPro:IPR023148 PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737
GO:GO:0003723 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR016009 GO:GO:0052906 RefSeq:YP_505786.1 PDB:3KNU
PDB:4IG6 PDBsum:3KNU PDBsum:4IG6 ProteinModelPortal:Q2GIL5
STRING:Q2GIL5 GeneID:3930029 KEGG:aph:APH_1267 PATRIC:20951324
eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554 OMA:PRLLMSP
ProtClustDB:PRK00026 BioCyc:APHA212042:GHPM-1270-MONOMER
EvolutionaryTrace:Q2GIL5 Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
Uniprot:Q2GIL5
Length = 232
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 82/227 (36%), Positives = 134/227 (59%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M F+V+T+FP+MF A +K ++LN+++ R F++N + +DD PYGGG GM
Sbjct: 1 MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGM 60
Query: 61 IM----LGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQ 116
++ LG+ I++ ++ + SP+G T +I + + N+ LLCGR++
Sbjct: 61 LLRADVLGRCIDEVLSLHPNTKLM-----FTSPRGVSFTQDIARQTMNFDNITLLCGRFE 115
Query: 117 AIDQRFLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQDSFINGLLD 176
ID+R +D + +E+S+GD++LSGGEL AM++ID VR++P V+ N +++ + G L+
Sbjct: 116 GIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLE 175
Query: 177 CSYYTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDLI 223
YT+P + MEVP VLL+GNH IT +RPDL+
Sbjct: 176 YPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRPDLL 222
>TIGR_CMR|SPO_3259 [details] [associations]
symbol:SPO_3259 "tRNA (guanine-N1)-methyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009019 "tRNA
(guanine-N1-)-methyltransferase activity" evidence=ISS]
HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003723 InterPro:IPR016009
GO:GO:0052906 eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554
OMA:PRLLMSP ProtClustDB:PRK00026 Gene3D:1.10.1270.20
TIGRFAMs:TIGR00088 RefSeq:YP_168462.1 ProteinModelPortal:Q5LNE6
GeneID:3195328 KEGG:sil:SPO3259 PATRIC:23379963 Uniprot:Q5LNE6
Length = 243
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 77/222 (34%), Positives = 127/222 (57%)
Query: 2 QFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGMI 61
Q +ITLFP+ F + +T +A + + L+ + R F +R +DD P GGG GM+
Sbjct: 12 QARIITLFPQAFPGVLGESLTGKALQDGLWQLHTTDLRRFGVGKHRNVDDTPAGGGAGMV 71
Query: 62 MLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQR 121
+ + I A Y+SP+G+ + ++ L + + LLCGR++ +D+R
Sbjct: 72 LRPDVLGAAIEATMQGTSSNWPLIYLSPRGRPMDQALMQSLARCDGVTLLCGRFEGVDER 131
Query: 122 FLDNFIDEEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQD-SFINGLLDCSYY 180
L+++ +E+S+GDF+++GGE+ A LIDA VRLLP VL N+ + ++ SF +GLL+ Y
Sbjct: 132 VLEHYGIQEVSLGDFVMTGGEIAAQALIDATVRLLPGVLGNQASTEEESFSSGLLEHPQY 191
Query: 181 TKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDL 222
T+P ++ +P VL+SG+H IT ++RPDL
Sbjct: 192 TRPAEWMGRPIPEVLMSGHHGKVAEWRRAQSEEITRRRRPDL 233
>UNIPROTKB|P66968 [details] [associations]
symbol:trmD "tRNA (guanine-N(1)-)-methyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00605 InterPro:IPR002649 InterPro:IPR023148
PIRSF:PIRSF000386 Pfam:PF01746 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0003723 EMBL:BX842581 InterPro:IPR016009 GO:GO:0052906
eggNOG:COG0336 HOGENOM:HOG000016242 KO:K00554 OMA:PRLLMSP
ProtClustDB:PRK00026 Gene3D:1.10.1270.20 TIGRFAMs:TIGR00088
PIR:E70927 RefSeq:NP_217422.1 RefSeq:NP_337486.1
RefSeq:YP_006516359.1 ProteinModelPortal:P66968 SMR:P66968
PRIDE:P66968 EnsemblBacteria:EBMYCT00000003184
EnsemblBacteria:EBMYCT00000069551 GeneID:13317699 GeneID:888495
GeneID:925304 KEGG:mtc:MT2974 KEGG:mtu:Rv2906c KEGG:mtv:RVBD_2906c
PATRIC:18128308 TubercuList:Rv2906c Uniprot:P66968
Length = 230
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/230 (33%), Positives = 121/230 (52%)
Query: 1 MQFDVITLFPEMFSAITQSGITRRAFEKKQYSLNLWNPRNFSSNNYRKIDDYPYGGGVGM 60
M+ D++T+FP + QS + +A E LN+ + R ++ + + +DD PYGGG GM
Sbjct: 1 MRIDIVTIFPACLDPLRQS-LPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGM 59
Query: 61 IMLGKPIEDTITAXXXXXXXXXXXXYMSPQGKKLTHNIIIKLLKESNLILLCGRYQAIDQ 120
+M P+ A +P G T + ES+L+ CGRY+ IDQ
Sbjct: 60 VMKA-PVWGE--ALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQ 116
Query: 121 RFLDNFID----EEISVGDFILSGGELPAMMLIDAIVRLLPKVLNNKLNMQDSF----IN 172
R + + EE+S+GD++L GGE A+++++A++RLL VL N + QD ++
Sbjct: 117 RVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLD 176
Query: 173 GLLDCSYYTKPRIYLNMEVPIVLLSGNHXXXXXXXXXXXXXITNKKRPDL 222
GLL+ YT+P + ++VP VLLSG+H T ++RPDL
Sbjct: 177 GLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDL 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.141 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 221 0.00095 112 3 11 22 0.36 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 588 (63 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 16.72u 0.07s 16.79t Elapsed: 00:00:10
Total cpu time: 16.72u 0.07s 16.79t Elapsed: 00:00:12
Start: Thu Aug 15 11:08:16 2013 End: Thu Aug 15 11:08:28 2013