Query psy3769
Match_columns 974
No_of_seqs 843 out of 6405
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 16:48:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pff_A ATP-citrate synthase; p 100.0 6E-112 2E-116 1029.2 36.9 575 3-594 6-794 (829)
2 2fp4_B Succinyl-COA ligase [GD 100.0 3.9E-74 1.3E-78 656.0 32.3 340 1-346 1-351 (395)
3 2nu8_B SCS-beta, succinyl-COA 100.0 2.9E-73 1E-77 648.5 33.2 340 1-346 1-344 (388)
4 3ufx_B Succinyl-COA synthetase 100.0 5.7E-71 2E-75 630.8 30.0 332 1-346 1-335 (397)
5 3mwd_A ATP-citrate synthase; A 100.0 3.1E-67 1.1E-71 600.3 20.9 314 3-329 6-347 (425)
6 2yv2_A Succinyl-COA synthetase 100.0 7.1E-56 2.4E-60 489.1 21.7 269 310-586 8-282 (297)
7 2fp4_A Succinyl-COA ligase [GD 100.0 2.7E-55 9.4E-60 485.5 23.3 269 310-586 9-286 (305)
8 1oi7_A Succinyl-COA synthetase 100.0 1.5E-55 5.2E-60 484.5 19.7 267 312-586 4-274 (288)
9 2yv1_A Succinyl-COA ligase [AD 100.0 2.3E-55 7.9E-60 484.4 19.7 265 313-586 11-279 (294)
10 2nu8_A Succinyl-COA ligase [AD 100.0 1.5E-53 5E-58 469.2 22.6 268 311-586 3-274 (288)
11 2csu_A 457AA long hypothetical 100.0 2.2E-52 7.5E-57 487.6 21.4 288 313-629 7-309 (457)
12 3mwd_B ATP-citrate synthase; A 100.0 2.2E-50 7.4E-55 447.9 21.1 271 311-595 6-309 (334)
13 3dmy_A Protein FDRA; predicted 100.0 1.6E-39 5.4E-44 376.4 20.9 232 361-628 21-264 (480)
14 1wr2_A Hypothetical protein PH 100.0 1.7E-31 5.7E-36 286.3 20.1 205 1-221 18-237 (238)
15 2f1l_A 16S rRNA processing pro 100.0 2.8E-31 9.7E-36 271.7 13.3 132 840-974 17-148 (187)
16 3h9n_A Ribosome maturation fac 100.0 5.2E-31 1.8E-35 268.3 13.2 129 843-974 2-130 (177)
17 2qgg_A 16S rRNA-processing pro 100.0 4.9E-31 1.7E-35 269.7 10.5 131 841-974 9-143 (182)
18 2dyi_A Probable 16S rRNA-proce 99.9 3.3E-28 1.1E-32 244.0 11.4 122 842-974 2-123 (162)
19 3r8n_P 30S ribosomal protein S 99.9 8.1E-26 2.8E-30 196.2 5.0 66 783-848 14-79 (82)
20 3pys_P 30S ribosomal protein S 99.9 2.1E-25 7.2E-30 194.1 4.0 68 783-851 14-81 (83)
21 3bn0_A 30S ribosomal protein S 99.9 4.9E-24 1.7E-28 194.3 5.4 68 783-853 15-82 (112)
22 3bbn_P Ribosomal protein S16; 99.9 8.9E-25 3.1E-29 191.9 -1.9 68 783-854 14-81 (88)
23 3ff4_A Uncharacterized protein 99.8 1.3E-21 4.4E-26 187.0 6.9 113 312-444 2-117 (122)
24 1iuk_A Hypothetical protein TT 99.8 7.9E-21 2.7E-25 186.6 5.9 126 306-447 5-133 (140)
25 2duw_A Putative COA-binding pr 99.8 7.5E-20 2.6E-24 180.7 9.2 127 307-449 6-135 (145)
26 2d59_A Hypothetical protein PH 99.8 1E-19 3.4E-24 179.7 9.4 123 306-446 14-139 (144)
27 1y81_A Conserved hypothetical 99.8 3.9E-19 1.3E-23 174.0 8.2 108 326-447 25-132 (138)
28 3e5n_A D-alanine-D-alanine lig 99.2 7.2E-11 2.5E-15 135.0 17.0 166 4-214 159-335 (386)
29 4eg0_A D-alanine--D-alanine li 99.2 2.2E-10 7.5E-15 127.2 16.1 170 4-214 107-280 (317)
30 3i12_A D-alanine-D-alanine lig 99.2 2.5E-10 8.4E-15 129.5 15.8 170 4-214 140-316 (364)
31 2csu_A 457AA long hypothetical 99.1 4.9E-11 1.7E-15 139.0 7.4 191 108-324 139-377 (457)
32 3tqt_A D-alanine--D-alanine li 99.1 2.4E-09 8.2E-14 121.7 18.1 166 4-214 140-317 (372)
33 3lp8_A Phosphoribosylamine-gly 99.1 2.4E-09 8.4E-14 124.5 18.4 101 4-117 123-223 (442)
34 3k3p_A D-alanine--D-alanine li 99.1 3.5E-09 1.2E-13 120.8 19.3 166 4-214 161-337 (383)
35 3k5i_A Phosphoribosyl-aminoimi 99.0 2.3E-09 7.9E-14 123.2 17.1 167 4-218 123-292 (403)
36 3q2o_A Phosphoribosylaminoimid 99.0 5.2E-09 1.8E-13 119.5 19.6 167 4-217 112-278 (389)
37 1ehi_A LMDDL2, D-alanine:D-lac 99.0 3E-09 1E-13 121.1 16.8 173 4-215 135-318 (377)
38 3mjf_A Phosphoribosylamine--gl 99.0 3.7E-09 1.3E-13 122.6 17.4 101 4-117 107-207 (431)
39 3aw8_A PURK, phosphoribosylami 99.0 4.3E-09 1.5E-13 119.2 17.0 164 4-215 96-260 (369)
40 3glk_A Acetyl-COA carboxylase 99.0 4.6E-09 1.6E-13 124.8 17.5 170 4-215 164-362 (540)
41 3jrx_A Acetyl-COA carboxylase 99.0 5.6E-09 1.9E-13 124.7 18.0 170 4-215 180-378 (587)
42 1vkz_A Phosphoribosylamine--gl 99.0 7.9E-09 2.7E-13 119.0 18.1 172 4-215 106-287 (412)
43 3se7_A VANA; alpha-beta struct 99.0 3.9E-09 1.3E-13 118.7 14.5 166 4-215 132-307 (346)
44 2cqy_A Propionyl-COA carboxyla 99.0 6.5E-11 2.2E-15 109.6 -0.2 97 4-112 8-106 (108)
45 2i87_A D-alanine-D-alanine lig 98.9 2.4E-08 8.1E-13 113.1 20.2 167 4-215 129-308 (364)
46 3ouz_A Biotin carboxylase; str 98.9 7E-09 2.4E-13 120.6 16.2 174 4-215 119-294 (446)
47 4fu0_A D-alanine--D-alanine li 98.9 1.1E-08 3.8E-13 115.6 16.8 167 4-214 139-313 (357)
48 3orq_A N5-carboxyaminoimidazol 98.9 1.1E-08 3.7E-13 116.5 16.0 165 5-219 111-276 (377)
49 4e4t_A Phosphoribosylaminoimid 98.9 1.3E-08 4.5E-13 117.5 16.8 167 4-218 133-304 (419)
50 1ulz_A Pyruvate carboxylase N- 98.9 2.6E-08 9E-13 115.9 19.2 173 5-215 115-289 (451)
51 3lwb_A D-alanine--D-alanine li 98.9 9.7E-09 3.3E-13 116.8 13.8 168 4-213 151-330 (373)
52 2yrx_A Phosphoribosylglycinami 98.9 2.5E-08 8.6E-13 116.1 17.3 101 4-117 123-223 (451)
53 3r5x_A D-alanine--D-alanine li 98.8 1.7E-08 5.9E-13 111.1 14.2 165 4-214 97-264 (307)
54 1w96_A ACC, acetyl-coenzyme A 98.8 5E-08 1.7E-12 116.6 18.9 173 4-218 173-372 (554)
55 2vpq_A Acetyl-COA carboxylase; 98.8 4.8E-08 1.6E-12 113.7 18.1 173 5-215 115-290 (451)
56 1a9x_A Carbamoyl phosphate syn 98.8 2.9E-08 1E-12 127.2 17.7 169 4-215 128-301 (1073)
57 1kjq_A GART 2, phosphoribosylg 98.8 3.3E-08 1.1E-12 112.6 16.0 167 5-215 113-280 (391)
58 2z04_A Phosphoribosylaminoimid 98.8 1.1E-08 3.7E-13 115.7 11.4 160 4-215 92-252 (365)
59 2yw2_A Phosphoribosylamine--gl 98.8 4.7E-08 1.6E-12 112.7 16.9 100 4-116 102-201 (424)
60 2xcl_A Phosphoribosylamine--gl 98.8 3.6E-08 1.2E-12 113.7 15.4 101 4-117 102-202 (422)
61 1iow_A DD-ligase, DDLB, D-ALA\ 98.8 3.9E-08 1.3E-12 107.8 14.9 169 4-215 96-272 (306)
62 2dzd_A Pyruvate carboxylase; b 98.8 5.4E-08 1.8E-12 113.6 16.9 173 4-215 120-294 (461)
63 4dim_A Phosphoribosylglycinami 98.8 1.2E-07 4.1E-12 108.5 19.4 168 4-215 109-277 (403)
64 2dwc_A PH0318, 433AA long hypo 98.8 4.1E-08 1.4E-12 113.6 15.1 170 5-215 121-293 (433)
65 3vmm_A Alanine-anticapsin liga 98.8 1E-07 3.4E-12 111.8 18.1 176 4-214 139-327 (474)
66 3eth_A Phosphoribosylaminoimid 98.8 3.5E-08 1.2E-12 111.3 13.3 158 5-215 80-240 (355)
67 1e4e_A Vancomycin/teicoplanin 98.8 1.2E-08 4.1E-13 114.5 9.4 166 4-215 132-307 (343)
68 2qk4_A Trifunctional purine bi 98.7 1.3E-07 4.5E-12 110.0 17.7 99 5-116 129-228 (452)
69 3vot_A L-amino acid ligase, BL 98.7 6.1E-08 2.1E-12 111.9 14.1 175 5-215 113-288 (425)
70 2w70_A Biotin carboxylase; lig 98.7 1.7E-07 5.8E-12 109.0 17.7 172 5-215 116-290 (449)
71 3n6r_A Propionyl-COA carboxyla 98.7 2.7E-08 9.1E-13 121.4 11.2 173 4-214 115-289 (681)
72 2ip4_A PURD, phosphoribosylami 98.7 1.5E-07 5.1E-12 108.4 16.9 96 4-116 101-196 (417)
73 3ax6_A Phosphoribosylaminoimid 98.7 1E-07 3.5E-12 108.3 13.2 158 5-215 101-259 (380)
74 2qf7_A Pyruvate carboxylase pr 98.6 6.6E-08 2.2E-12 124.1 12.0 178 4-219 134-314 (1165)
75 1a9x_A Carbamoyl phosphate syn 98.6 2.9E-07 9.9E-12 118.1 17.5 169 5-215 675-843 (1073)
76 2pvp_A D-alanine-D-alanine lig 98.6 4.4E-08 1.5E-12 111.1 8.9 171 4-215 149-322 (367)
77 3u9t_A MCC alpha, methylcroton 98.6 2.5E-08 8.6E-13 121.5 7.3 173 4-214 141-315 (675)
78 2fb9_A D-alanine:D-alanine lig 98.6 2.5E-07 8.6E-12 102.9 14.3 165 4-214 118-286 (322)
79 3ln6_A Glutathione biosynthesi 98.6 4.6E-08 1.6E-12 120.1 8.1 117 4-139 484-607 (750)
80 3va7_A KLLA0E08119P; carboxyla 98.6 1.6E-07 5.3E-12 120.8 12.8 176 5-218 145-322 (1236)
81 3hbl_A Pyruvate carboxylase; T 98.4 2.4E-07 8.2E-12 118.7 8.1 173 4-215 118-292 (1150)
82 2r7k_A 5-formaminoimidazole-4- 98.4 2.9E-06 1E-10 95.7 14.7 81 7-109 127-208 (361)
83 3ln7_A Glutathione biosynthesi 98.3 8.6E-07 2.9E-11 108.7 8.9 92 6-116 491-587 (757)
84 2pn1_A Carbamoylphosphate synt 98.2 1E-05 3.5E-10 89.6 15.4 94 4-122 114-209 (331)
85 1uc8_A LYSX, lysine biosynthes 98.2 6.1E-07 2.1E-11 96.7 4.1 96 4-115 88-186 (280)
86 2r85_A PURP protein PF1517; AT 98.2 1.3E-05 4.5E-10 88.6 14.8 174 5-220 101-290 (334)
87 1z2n_X Inositol 1,3,4-trisphos 97.4 0.00021 7E-09 78.9 8.0 89 5-115 99-190 (324)
88 4ffl_A PYLC; amino acid, biosy 97.3 0.00022 7.7E-09 80.1 7.3 75 4-117 103-177 (363)
89 3ijp_A DHPR, dihydrodipicolina 97.3 0.00036 1.2E-08 75.8 8.4 118 315-444 21-151 (288)
90 4f3y_A DHPR, dihydrodipicolina 97.3 0.0003 1E-08 76.0 7.2 112 323-443 12-135 (272)
91 1i7n_A Synapsin II; synapse, p 97.2 0.0023 7.9E-08 70.4 13.7 153 7-213 120-275 (309)
92 3qy9_A DHPR, dihydrodipicolina 97.0 0.00056 1.9E-08 72.7 5.5 107 323-444 8-115 (243)
93 1dih_A Dihydrodipicolinate red 96.9 0.0013 4.4E-08 71.2 7.8 119 313-443 3-134 (273)
94 2p0a_A Synapsin-3, synapsin II 96.9 0.0042 1.4E-07 69.2 12.0 152 7-212 137-291 (344)
95 2pbz_A Hypothetical protein; N 96.8 0.00064 2.2E-08 75.2 4.5 78 8-116 102-179 (320)
96 1pk8_A RAT synapsin I; ATP bin 96.8 0.0052 1.8E-07 69.9 12.0 151 8-212 233-386 (422)
97 3df7_A Putative ATP-grAsp supe 96.8 0.0069 2.4E-07 66.4 12.0 135 4-214 110-245 (305)
98 3keo_A Redox-sensing transcrip 96.6 0.0045 1.5E-07 64.2 8.6 110 295-411 63-181 (212)
99 1gsa_A Glutathione synthetase; 96.6 0.0017 5.9E-08 70.6 5.7 84 8-113 128-214 (316)
100 2dc1_A L-aspartate dehydrogena 96.5 0.0035 1.2E-07 66.0 6.9 106 323-441 5-113 (236)
101 2q7d_A Inositol-tetrakisphosph 96.2 0.0033 1.1E-07 70.4 5.0 88 6-116 118-217 (346)
102 1p9l_A Dihydrodipicolinate red 96.1 0.013 4.6E-07 62.1 9.1 102 323-443 5-110 (245)
103 3i23_A Oxidoreductase, GFO/IDH 95.7 0.018 6.3E-07 64.1 8.5 105 323-435 7-120 (349)
104 3o9z_A Lipopolysaccaride biosy 95.7 0.026 8.9E-07 62.0 9.5 105 323-434 8-126 (312)
105 4ew6_A D-galactose-1-dehydroge 95.7 0.014 4.8E-07 64.7 7.1 102 323-434 30-135 (330)
106 3db2_A Putative NADPH-dependen 95.5 0.013 4.6E-07 65.3 6.3 105 323-434 10-120 (354)
107 2dt5_A AT-rich DNA-binding pro 95.5 0.032 1.1E-06 57.9 8.5 105 299-411 63-173 (211)
108 3q2i_A Dehydrogenase; rossmann 95.3 0.018 6.1E-07 64.3 6.4 111 314-434 12-129 (354)
109 3dmy_A Protein FDRA; predicted 95.2 0.37 1.2E-05 55.9 17.2 61 261-321 112-177 (480)
110 3euw_A MYO-inositol dehydrogen 95.2 0.019 6.4E-07 63.8 6.1 105 323-434 9-119 (344)
111 3e18_A Oxidoreductase; dehydro 95.2 0.022 7.6E-07 63.8 6.7 105 323-434 10-119 (359)
112 3c1a_A Putative oxidoreductase 95.2 0.035 1.2E-06 60.8 8.2 105 323-434 15-123 (315)
113 3btv_A Galactose/lactose metab 95.2 0.045 1.5E-06 63.1 9.4 114 314-435 19-150 (438)
114 4hkt_A Inositol 2-dehydrogenas 95.1 0.024 8.2E-07 62.6 6.7 105 323-435 8-118 (331)
115 4gmf_A Yersiniabactin biosynth 95.0 0.034 1.2E-06 62.7 7.7 109 313-435 5-123 (372)
116 3fhl_A Putative oxidoreductase 95.0 0.042 1.4E-06 61.5 8.4 106 323-435 10-120 (362)
117 3rc1_A Sugar 3-ketoreductase; 95.0 0.029 1E-06 62.6 6.9 106 323-435 32-144 (350)
118 3oa2_A WBPB; oxidoreductase, s 94.9 0.065 2.2E-06 59.0 9.5 106 323-434 8-127 (318)
119 3ufx_B Succinyl-COA synthetase 94.8 0.068 2.3E-06 60.7 9.4 92 461-553 248-344 (397)
120 2vt3_A REX, redox-sensing tran 94.7 0.031 1E-06 58.2 5.7 105 300-411 69-178 (215)
121 3evn_A Oxidoreductase, GFO/IDH 94.6 0.086 2.9E-06 58.1 9.4 105 323-434 10-121 (329)
122 3mz0_A Inositol 2-dehydrogenas 94.6 0.03 1E-06 62.2 5.7 116 323-445 7-131 (344)
123 3ezy_A Dehydrogenase; structur 94.5 0.043 1.5E-06 60.9 6.8 106 323-435 7-119 (344)
124 3ec7_A Putative dehydrogenase; 94.5 0.04 1.4E-06 61.6 6.6 106 323-435 28-142 (357)
125 3moi_A Probable dehydrogenase; 94.5 0.033 1.1E-06 63.1 5.9 106 323-434 7-118 (387)
126 3cea_A MYO-inositol 2-dehydrog 94.5 0.078 2.7E-06 58.7 8.8 106 323-435 13-127 (346)
127 3e82_A Putative oxidoreductase 94.4 0.05 1.7E-06 61.0 7.1 106 323-435 12-122 (364)
128 3e9m_A Oxidoreductase, GFO/IDH 94.4 0.06 2E-06 59.5 7.6 105 323-434 10-121 (330)
129 3gdo_A Uncharacterized oxidore 94.4 0.044 1.5E-06 61.3 6.6 106 323-435 10-120 (358)
130 2glx_A 1,5-anhydro-D-fructose 94.4 0.054 1.9E-06 59.6 7.1 109 323-438 5-121 (332)
131 1j5p_A Aspartate dehydrogenase 94.4 0.081 2.8E-06 56.2 8.0 98 327-438 20-119 (253)
132 1tlt_A Putative oxidoreductase 94.1 0.091 3.1E-06 57.5 8.3 104 323-435 10-120 (319)
133 3ohs_X Trans-1,2-dihydrobenzen 94.1 0.069 2.4E-06 59.0 7.3 109 323-435 7-121 (334)
134 3uuw_A Putative oxidoreductase 93.9 0.063 2.1E-06 58.6 6.4 102 324-434 12-120 (308)
135 2p2s_A Putative oxidoreductase 93.7 0.13 4.4E-06 56.8 8.4 70 363-435 51-121 (336)
136 1f06_A MESO-diaminopimelate D- 93.5 0.062 2.1E-06 59.3 5.4 105 323-437 8-117 (320)
137 2nvw_A Galactose/lactose metab 93.5 0.11 3.9E-06 60.4 7.9 102 328-434 52-169 (479)
138 1ydw_A AX110P-like protein; st 93.3 0.11 3.7E-06 58.0 7.2 69 364-435 57-126 (362)
139 1zh8_A Oxidoreductase; TM0312, 93.3 0.1 3.4E-06 57.9 6.8 114 313-435 16-137 (340)
140 3kux_A Putative oxidoreductase 93.3 0.13 4.4E-06 57.2 7.6 72 361-435 50-122 (352)
141 1lc0_A Biliverdin reductase A; 93.2 0.16 5.3E-06 55.2 8.0 99 328-434 16-119 (294)
142 2ho3_A Oxidoreductase, GFO/IDH 93.0 0.12 4.2E-06 56.7 6.8 104 323-434 6-116 (325)
143 1h6d_A Precursor form of gluco 92.7 0.12 4.2E-06 59.3 6.6 105 323-434 88-204 (433)
144 1vm6_A DHPR, dihydrodipicolina 92.5 0.2 6.7E-06 52.2 7.1 96 324-442 18-114 (228)
145 3f4l_A Putative oxidoreductase 92.2 0.17 5.8E-06 56.1 6.6 72 361-435 48-120 (345)
146 3bio_A Oxidoreductase, GFO/IDH 92.0 0.14 4.8E-06 55.9 5.6 106 323-436 14-123 (304)
147 3qha_A Putative oxidoreductase 91.9 0.4 1.4E-05 52.0 9.1 103 324-436 21-128 (296)
148 3u3x_A Oxidoreductase; structu 91.6 0.38 1.3E-05 53.7 8.7 70 363-435 73-143 (361)
149 3pef_A 6-phosphogluconate dehy 91.4 0.17 5.9E-06 54.5 5.4 103 323-436 6-118 (287)
150 4e21_A 6-phosphogluconate dehy 90.8 0.22 7.4E-06 55.8 5.5 105 323-436 27-138 (358)
151 4dll_A 2-hydroxy-3-oxopropiona 90.7 0.31 1E-05 53.5 6.6 103 323-436 36-147 (320)
152 3tri_A Pyrroline-5-carboxylate 90.6 0.47 1.6E-05 51.0 8.0 88 324-417 9-105 (280)
153 2fp4_B Succinyl-COA ligase [GD 90.6 0.92 3.1E-05 51.4 10.6 92 461-553 264-360 (395)
154 2ixa_A Alpha-N-acetylgalactosa 90.4 0.25 8.5E-06 56.9 5.8 109 323-438 25-150 (444)
155 4gbj_A 6-phosphogluconate dehy 90.3 0.62 2.1E-05 50.6 8.6 105 323-436 10-120 (297)
156 3l6d_A Putative oxidoreductase 90.3 0.21 7.3E-06 54.4 4.9 102 324-436 15-124 (306)
157 4had_A Probable oxidoreductase 90.2 0.31 1.1E-05 53.9 6.2 68 363-434 70-140 (350)
158 3m2t_A Probable dehydrogenase; 89.7 0.33 1.1E-05 54.2 5.9 70 362-434 52-122 (359)
159 3pdu_A 3-hydroxyisobutyrate de 89.6 0.34 1.2E-05 52.1 5.7 103 323-436 6-118 (287)
160 2nu8_B SCS-beta, succinyl-COA 89.4 1.4 4.7E-05 49.8 10.8 92 460-553 256-353 (388)
161 4fb5_A Probable oxidoreductase 89.4 0.5 1.7E-05 52.7 7.2 68 363-434 78-148 (393)
162 1vpd_A Tartronate semialdehyde 89.0 0.42 1.5E-05 51.4 5.9 101 323-436 10-122 (299)
163 3do5_A HOM, homoserine dehydro 88.8 0.8 2.7E-05 50.5 8.1 117 365-490 65-190 (327)
164 2p4q_A 6-phosphogluconate dehy 88.4 0.55 1.9E-05 54.9 6.7 103 324-436 16-132 (497)
165 4gqa_A NAD binding oxidoreduct 88.4 0.57 2E-05 53.1 6.8 69 363-434 80-150 (412)
166 1yb4_A Tartronic semialdehyde 87.9 0.83 2.8E-05 49.0 7.4 103 323-436 8-119 (295)
167 3ggo_A Prephenate dehydrogenas 87.9 0.94 3.2E-05 49.6 7.9 97 323-426 38-143 (314)
168 3oqb_A Oxidoreductase; structu 87.9 0.49 1.7E-05 53.0 5.8 69 362-434 66-137 (383)
169 3v5n_A Oxidoreductase; structu 87.8 0.72 2.5E-05 52.5 7.1 67 365-434 92-164 (417)
170 1xea_A Oxidoreductase, GFO/IDH 87.8 0.77 2.6E-05 50.2 7.2 103 323-435 7-118 (323)
171 3b1f_A Putative prephenate deh 87.8 0.7 2.4E-05 49.5 6.7 105 323-436 11-124 (290)
172 2h78_A Hibadh, 3-hydroxyisobut 87.7 0.51 1.8E-05 51.0 5.6 103 323-436 8-120 (302)
173 2zyd_A 6-phosphogluconate dehy 87.7 0.47 1.6E-05 55.2 5.6 103 324-436 21-136 (480)
174 3qsg_A NAD-binding phosphogluc 87.2 0.57 2E-05 51.2 5.7 106 323-436 29-142 (312)
175 3dty_A Oxidoreductase, GFO/IDH 87.2 0.86 3E-05 51.5 7.3 66 365-434 67-139 (398)
176 2iz1_A 6-phosphogluconate dehy 87.1 0.65 2.2E-05 53.9 6.3 104 323-436 10-126 (474)
177 3doj_A AT3G25530, dehydrogenas 87.0 0.47 1.6E-05 51.7 4.8 103 323-436 26-138 (310)
178 3ip3_A Oxidoreductase, putativ 86.5 0.52 1.8E-05 51.9 4.9 78 364-445 53-133 (337)
179 2uyy_A N-PAC protein; long-cha 86.4 0.73 2.5E-05 50.1 5.9 103 323-436 35-147 (316)
180 2cvz_A Dehydrogenase, 3-hydrox 86.3 1.7 5.7E-05 46.3 8.6 101 323-436 6-113 (289)
181 4h3v_A Oxidoreductase domain p 85.7 1.5 5.1E-05 48.7 8.2 67 365-434 62-132 (390)
182 3obb_A Probable 3-hydroxyisobu 85.7 0.94 3.2E-05 49.3 6.2 101 324-435 9-119 (300)
183 2rcy_A Pyrroline carboxylate r 85.6 0.71 2.4E-05 48.6 5.2 88 323-416 9-97 (262)
184 2pgd_A 6-phosphogluconate dehy 85.0 1.3 4.4E-05 51.5 7.4 104 323-436 7-124 (482)
185 3nkl_A UDP-D-quinovosamine 4-d 84.2 0.84 2.9E-05 43.2 4.4 78 323-405 9-95 (141)
186 2gf2_A Hibadh, 3-hydroxyisobut 84.0 1 3.5E-05 48.2 5.6 101 323-434 5-115 (296)
187 3fr7_A Putative ketol-acid red 83.8 0.52 1.8E-05 54.5 3.2 113 324-443 60-186 (525)
188 4ezb_A Uncharacterized conserv 83.8 1.3 4.5E-05 48.4 6.4 102 323-435 29-143 (317)
189 3ba1_A HPPR, hydroxyphenylpyru 83.1 0.83 2.8E-05 50.5 4.4 101 324-436 170-274 (333)
190 4gwg_A 6-phosphogluconate dehy 82.8 1.4 4.8E-05 51.2 6.4 106 323-437 9-127 (484)
191 3d1l_A Putative NADP oxidoredu 82.8 1.2 4.1E-05 47.0 5.4 86 323-416 15-108 (266)
192 3upl_A Oxidoreductase; rossman 82.7 0.85 2.9E-05 52.3 4.5 70 363-435 92-162 (446)
193 2ozp_A N-acetyl-gamma-glutamyl 82.5 1.7 5.9E-05 48.2 6.7 85 323-414 9-103 (345)
194 3g0o_A 3-hydroxyisobutyrate de 82.0 0.99 3.4E-05 48.9 4.5 102 324-436 13-125 (303)
195 3ktd_A Prephenate dehydrogenas 82.0 0.93 3.2E-05 50.3 4.3 86 323-415 13-105 (341)
196 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.5 1.6 5.5E-05 50.7 6.3 104 323-436 6-126 (478)
197 3cky_A 2-hydroxymethyl glutara 81.4 1.5 5.2E-05 47.1 5.7 101 323-435 9-120 (301)
198 3pzr_A Aspartate-semialdehyde 81.0 1.8 6.1E-05 48.5 6.2 112 322-440 4-135 (370)
199 3ic5_A Putative saccharopine d 80.8 1.2 4E-05 40.1 3.9 92 323-426 10-114 (118)
200 3uw3_A Aspartate-semialdehyde 80.0 1.7 5.9E-05 48.8 5.6 113 322-441 8-140 (377)
201 2pv7_A T-protein [includes: ch 80.0 3.3 0.00011 44.7 7.7 78 323-416 26-104 (298)
202 2ahr_A Putative pyrroline carb 79.9 0.89 3E-05 47.9 3.1 83 323-416 8-96 (259)
203 1z82_A Glycerol-3-phosphate de 79.9 0.4 1.4E-05 52.8 0.4 49 364-416 69-117 (335)
204 1i36_A Conserved hypothetical 79.5 1.9 6.5E-05 45.3 5.6 94 323-426 5-103 (264)
205 3hsk_A Aspartate-semialdehyde 78.7 3.1 0.00011 46.7 7.2 87 322-414 23-128 (381)
206 2f1k_A Prephenate dehydrogenas 77.2 2.7 9.2E-05 44.6 5.9 87 323-419 5-99 (279)
207 4dgs_A Dehydrogenase; structur 76.6 2.6 8.9E-05 46.7 5.7 99 324-433 177-278 (340)
208 3mtj_A Homoserine dehydrogenas 76.0 1.9 6.5E-05 49.5 4.5 120 363-491 63-186 (444)
209 2g0t_A Conserved hypothetical 75.8 5.4 0.00018 44.2 8.0 70 363-437 75-150 (350)
210 1pm3_A MTH1895; unknown functi 75.4 2 6.8E-05 38.6 3.6 30 937-966 19-49 (97)
211 2g5c_A Prephenate dehydrogenas 74.6 26 0.00088 36.9 12.9 98 323-426 6-111 (281)
212 3gt0_A Pyrroline-5-carboxylate 74.6 1.2 4.2E-05 46.6 2.3 89 323-416 7-103 (247)
213 2izz_A Pyrroline-5-carboxylate 72.6 4 0.00014 44.5 5.9 91 323-416 27-124 (322)
214 3dr3_A N-acetyl-gamma-glutamyl 72.2 4.6 0.00016 44.6 6.3 86 323-414 9-110 (337)
215 3c24_A Putative oxidoreductase 71.3 1.8 6.2E-05 46.3 2.7 70 322-400 15-89 (286)
216 1yqg_A Pyrroline-5-carboxylate 71.1 1.5 5.3E-05 46.0 2.1 81 323-415 5-93 (263)
217 1sqr_A 50S ribosomal protein L 71.1 4.1 0.00014 36.2 4.4 27 899-925 19-45 (95)
218 3pid_A UDP-glucose 6-dehydroge 70.2 6 0.00021 45.2 6.9 61 364-426 97-168 (432)
219 2ep5_A 350AA long hypothetical 70.0 4.7 0.00016 44.7 5.8 84 323-413 9-111 (350)
220 4huj_A Uncharacterized protein 69.0 3.8 0.00013 42.0 4.5 83 323-413 28-116 (220)
221 3j21_c 50S ribosomal protein L 68.8 4.2 0.00014 35.6 3.9 28 898-925 18-45 (87)
222 1t4b_A Aspartate-semialdehyde 67.2 9 0.00031 42.8 7.3 113 322-441 5-137 (367)
223 3pp8_A Glyoxylate/hydroxypyruv 66.8 3.2 0.00011 45.5 3.5 95 328-433 148-249 (315)
224 2czc_A Glyceraldehyde-3-phosph 66.8 4.8 0.00017 44.3 5.0 47 363-413 66-112 (334)
225 3abi_A Putative uncharacterize 66.5 3.5 0.00012 45.8 3.9 65 367-439 68-132 (365)
226 3c8m_A Homoserine dehydrogenas 66.3 4.4 0.00015 44.6 4.6 68 369-440 78-149 (331)
227 3e5r_O PP38, glyceraldehyde-3- 66.0 4 0.00014 45.1 4.1 42 369-411 83-125 (337)
228 1eys_H Photosynthetic reaction 66.0 3.8 0.00013 43.2 3.7 23 942-964 149-171 (259)
229 3gvx_A Glycerate dehydrogenase 65.7 2.4 8.1E-05 45.9 2.1 99 324-433 128-229 (290)
230 4dpl_A Malonyl-COA/succinyl-CO 65.0 9.2 0.00032 42.5 6.9 86 322-414 11-114 (359)
231 4dpk_A Malonyl-COA/succinyl-CO 65.0 9.2 0.00032 42.5 6.9 86 322-414 11-114 (359)
232 3k96_A Glycerol-3-phosphate de 64.9 5.5 0.00019 44.3 5.0 86 324-416 35-139 (356)
233 3htr_A Uncharacterized PRC-bar 64.2 3.6 0.00012 38.4 2.8 29 937-965 13-41 (120)
234 4a18_H RPL35A; ribosome, eukar 64.1 6 0.0002 36.2 4.1 28 898-925 31-58 (113)
235 3m2p_A UDP-N-acetylglucosamine 63.7 8.2 0.00028 41.2 6.0 82 323-411 7-109 (311)
236 1np3_A Ketol-acid reductoisome 62.0 5.7 0.00019 43.7 4.4 80 324-413 22-109 (338)
237 2py6_A Methyltransferase FKBM; 61.6 5.2 0.00018 45.3 4.1 100 293-405 33-136 (409)
238 1u8f_O GAPDH, glyceraldehyde-3 61.3 4.8 0.00016 44.4 3.6 43 369-412 81-124 (335)
239 3ing_A Homoserine dehydrogenas 59.7 14 0.00046 40.6 6.9 129 369-517 73-208 (325)
240 3t7a_A Inositol pyrophosphate 59.7 1.4 4.7E-05 47.9 -1.1 41 6-47 99-152 (330)
241 1b7g_O Protein (glyceraldehyde 58.7 7.7 0.00026 42.8 4.7 46 365-413 66-111 (340)
242 1qp8_A Formate dehydrogenase; 58.6 4.9 0.00017 43.7 3.0 98 323-432 129-229 (303)
243 2ejw_A HDH, homoserine dehydro 58.4 6 0.00021 43.5 3.8 59 365-430 56-116 (332)
244 3izc_j 60S ribosomal protein R 57.8 5.2 0.00018 36.3 2.5 31 898-928 24-55 (107)
245 1evy_A Glycerol-3-phosphate de 57.7 4 0.00014 45.2 2.2 83 323-415 20-129 (366)
246 3pwk_A Aspartate-semialdehyde 56.8 15 0.00051 41.0 6.6 89 322-414 6-99 (366)
247 1ebf_A Homoserine dehydrogenas 56.4 5.5 0.00019 44.4 3.0 55 379-437 85-142 (358)
248 2fp4_A Succinyl-COA ligase [GD 56.2 11 0.00036 41.0 5.2 62 260-321 151-213 (305)
249 2hjs_A USG-1 protein homolog; 56.2 14 0.00049 40.6 6.3 87 323-414 11-103 (340)
250 3rst_A Signal peptide peptidas 56.0 13 0.00045 38.7 5.7 82 461-553 3-90 (240)
251 3iz5_j 60S ribosomal protein L 55.3 7 0.00024 35.7 2.9 33 898-930 28-61 (111)
252 2w2k_A D-mandelate dehydrogena 55.3 9.4 0.00032 42.2 4.7 105 323-436 168-279 (348)
253 1mx3_A CTBP1, C-terminal bindi 55.2 5 0.00017 44.5 2.5 102 323-433 173-279 (347)
254 1sc6_A PGDH, D-3-phosphoglycer 55.1 8.2 0.00028 43.7 4.2 97 328-433 154-253 (404)
255 3dtt_A NADP oxidoreductase; st 55.1 4.6 0.00016 42.1 2.1 66 324-398 25-110 (245)
256 3dqp_A Oxidoreductase YLBE; al 54.8 13 0.00046 37.2 5.5 83 323-411 5-106 (219)
257 1txg_A Glycerol-3-phosphate de 53.8 5 0.00017 43.5 2.1 83 324-413 6-107 (335)
258 2yv1_A Succinyl-COA ligase [AD 53.4 12 0.00042 40.3 5.1 62 260-321 149-211 (294)
259 1oi7_A Succinyl-COA synthetase 53.3 12 0.0004 40.3 4.9 62 260-321 143-205 (288)
260 3dhn_A NAD-dependent epimerase 53.3 13 0.00046 37.3 5.2 81 323-411 9-112 (227)
261 1ys4_A Aspartate-semialdehyde 52.4 17 0.00058 40.2 6.2 86 323-413 13-117 (354)
262 1dxy_A D-2-hydroxyisocaproate 51.8 11 0.00039 41.3 4.6 100 328-436 154-256 (333)
263 1jay_A Coenzyme F420H2:NADP+ o 51.5 9.8 0.00034 38.2 3.8 82 323-414 5-101 (212)
264 1mv8_A GMD, GDP-mannose 6-dehy 51.5 16 0.00054 41.6 5.9 61 364-426 64-139 (436)
265 2z2v_A Hypothetical protein PH 51.0 12 0.0004 41.8 4.6 62 367-435 68-129 (365)
266 2raf_A Putative dinucleotide-b 50.1 23 0.00077 35.8 6.3 70 323-414 24-94 (209)
267 3tz6_A Aspartate-semialdehyde 50.1 21 0.00073 39.3 6.5 89 322-413 5-97 (344)
268 1cf2_P Protein (glyceraldehyde 49.9 15 0.00052 40.4 5.2 47 363-412 65-111 (337)
269 1rm4_O Glyceraldehyde 3-phosph 49.6 15 0.0005 40.6 5.0 36 378-414 91-126 (337)
270 3e48_A Putative nucleoside-dip 49.3 17 0.00059 38.0 5.5 83 323-411 5-106 (289)
271 1r0k_A 1-deoxy-D-xylulose 5-ph 49.2 11 0.00039 42.2 4.1 57 372-435 88-147 (388)
272 2yv2_A Succinyl-COA synthetase 49.1 14 0.00048 39.8 4.8 62 260-321 150-212 (297)
273 2nac_A NAD-dependent formate d 49.0 9.9 0.00034 42.8 3.6 98 328-433 200-303 (393)
274 4g2n_A D-isomer specific 2-hyd 49.0 13 0.00046 41.0 4.6 101 324-433 179-283 (345)
275 3mwd_B ATP-citrate synthase; A 48.9 18 0.00063 39.7 5.6 83 260-346 167-253 (334)
276 4egb_A DTDP-glucose 4,6-dehydr 48.1 25 0.00085 37.9 6.6 87 323-411 29-149 (346)
277 3gg2_A Sugar dehydrogenase, UD 47.7 26 0.00089 40.1 7.0 61 364-426 66-137 (450)
278 3ulk_A Ketol-acid reductoisome 47.6 3 0.0001 47.5 -0.9 103 329-442 47-159 (491)
279 2vns_A Metalloreductase steap3 46.4 7 0.00024 39.9 1.7 81 323-415 33-120 (215)
280 2nu8_A Succinyl-COA ligase [AD 46.4 17 0.00059 38.9 4.9 62 260-321 143-205 (288)
281 3vps_A TUNA, NAD-dependent epi 45.7 35 0.0012 36.0 7.3 82 323-411 12-119 (321)
282 1yj8_A Glycerol-3-phosphate de 45.7 9.7 0.00033 42.3 2.9 51 363-415 90-146 (375)
283 1xyg_A Putative N-acetyl-gamma 45.1 16 0.00056 40.5 4.6 84 323-414 21-116 (359)
284 1bg6_A N-(1-D-carboxylethyl)-L 44.9 20 0.00068 39.0 5.2 45 366-412 65-110 (359)
285 1dlj_A UDP-glucose dehydrogena 44.8 22 0.00075 40.0 5.7 59 366-426 63-132 (402)
286 3k1t_A Glutamate--cysteine lig 44.7 32 0.0011 38.3 6.5 52 43-103 280-332 (432)
287 2yq5_A D-isomer specific 2-hyd 44.6 10 0.00035 41.9 2.8 92 328-426 157-251 (343)
288 1ff9_A Saccharopine reductase; 44.3 19 0.00067 41.1 5.2 100 324-435 9-120 (450)
289 1gdh_A D-glycerate dehydrogena 44.1 8.7 0.0003 42.0 2.1 99 324-433 152-258 (320)
290 1hdo_A Biliverdin IX beta redu 44.0 23 0.00077 34.7 5.1 83 323-411 8-111 (206)
291 2nqt_A N-acetyl-gamma-glutamyl 44.0 12 0.0004 41.6 3.2 86 323-414 14-114 (352)
292 3evt_A Phosphoglycerate dehydr 44.0 12 0.00042 40.9 3.3 99 328-436 146-250 (324)
293 2r00_A Aspartate-semialdehyde 43.7 30 0.001 37.9 6.4 88 323-413 8-99 (336)
294 1gad_O D-glyceraldehyde-3-phos 43.5 30 0.001 37.9 6.3 44 369-413 78-122 (330)
295 2o4c_A Erythronate-4-phosphate 43.4 11 0.00038 42.2 2.8 152 268-435 64-229 (380)
296 3k5p_A D-3-phosphoglycerate de 43.2 22 0.00074 40.4 5.2 99 328-435 165-266 (416)
297 2ekl_A D-3-phosphoglycerate de 42.2 11 0.00038 41.0 2.6 101 323-433 147-252 (313)
298 3jtm_A Formate dehydrogenase, 41.8 18 0.0006 40.1 4.1 101 324-433 170-276 (351)
299 3ruf_A WBGU; rossmann fold, UD 41.6 48 0.0017 35.6 7.7 84 323-411 30-151 (351)
300 2axq_A Saccharopine dehydrogen 41.6 22 0.00074 41.0 5.0 60 369-435 81-140 (467)
301 2obn_A Hypothetical protein; s 41.4 28 0.00097 38.4 5.7 121 363-496 59-192 (349)
302 4ina_A Saccharopine dehydrogen 41.2 19 0.00066 40.5 4.5 66 367-435 65-137 (405)
303 1vkn_A N-acetyl-gamma-glutamyl 41.2 23 0.0008 39.1 5.0 85 322-414 17-111 (351)
304 2ey4_C Small nucleolar RNP sim 40.8 33 0.0011 29.6 4.8 22 945-966 33-54 (82)
305 5nul_A Flavodoxin; electron tr 40.6 49 0.0017 30.5 6.6 93 325-437 10-113 (138)
306 3dfu_A Uncharacterized protein 40.5 42 0.0014 34.8 6.5 85 322-436 10-95 (232)
307 3oet_A Erythronate-4-phosphate 39.8 12 0.00042 41.9 2.5 154 268-436 67-233 (381)
308 1xdw_A NAD+-dependent (R)-2-hy 39.3 14 0.00047 40.6 2.7 99 328-435 155-256 (331)
309 3r6d_A NAD-dependent epimerase 39.1 25 0.00085 35.3 4.5 83 323-411 10-108 (221)
310 2g82_O GAPDH, glyceraldehyde-3 38.9 23 0.00079 38.8 4.5 40 369-408 76-116 (331)
311 2j6i_A Formate dehydrogenase; 38.8 17 0.00057 40.5 3.4 103 323-433 169-277 (364)
312 2hvy_B GAR1, small nucleolar R 38.8 40 0.0014 30.5 5.2 22 945-966 33-54 (104)
313 1y7o_A ATP-dependent CLP prote 38.8 31 0.0011 35.3 5.2 50 504-553 63-114 (218)
314 1nvm_B Acetaldehyde dehydrogen 37.9 19 0.00065 39.1 3.6 84 323-411 9-105 (312)
315 4a7p_A UDP-glucose dehydrogena 37.6 41 0.0014 38.4 6.5 61 364-426 72-144 (446)
316 2gcg_A Glyoxylate reductase/hy 37.5 16 0.00055 40.0 2.9 96 323-426 160-261 (330)
317 3gyb_A Transcriptional regulat 36.9 1.2E+02 0.0041 31.0 9.6 205 299-526 19-234 (280)
318 2cuk_A Glycerate dehydrogenase 36.3 13 0.00045 40.4 2.0 62 323-395 149-211 (311)
319 3i83_A 2-dehydropantoate 2-red 36.0 20 0.00067 38.8 3.3 50 364-415 59-110 (320)
320 2cby_A ATP-dependent CLP prote 36.0 37 0.0013 34.4 5.2 77 471-553 15-96 (208)
321 3a06_A 1-deoxy-D-xylulose 5-ph 35.9 15 0.00052 40.8 2.3 52 378-435 85-139 (376)
322 1x0v_A GPD-C, GPDH-C, glycerol 35.9 27 0.00093 38.0 4.5 49 364-414 78-128 (354)
323 2ols_A Phosphoenolpyruvate syn 35.6 6.4E+02 0.022 30.7 17.0 44 168-216 291-335 (794)
324 2d0i_A Dehydrogenase; structur 35.3 19 0.00064 39.5 3.0 103 323-438 151-260 (333)
325 2g76_A 3-PGDH, D-3-phosphoglyc 35.1 18 0.0006 39.8 2.7 101 323-433 170-275 (335)
326 2q3e_A UDP-glucose 6-dehydroge 34.9 40 0.0014 38.6 5.9 95 323-426 10-146 (467)
327 2y0c_A BCEC, UDP-glucose dehyd 34.3 42 0.0014 38.6 5.9 61 364-426 72-143 (478)
328 2pi1_A D-lactate dehydrogenase 34.1 22 0.00077 38.9 3.4 96 328-434 150-251 (334)
329 2yjz_A Metalloreductase steap4 40.2 8.6 0.00029 38.9 0.0 65 323-395 24-90 (201)
330 4e12_A Diketoreductase; oxidor 33.9 27 0.00093 37.0 4.0 84 324-416 10-127 (283)
331 3e8x_A Putative NAD-dependent 33.7 43 0.0015 33.8 5.4 83 323-411 26-131 (236)
332 4id9_A Short-chain dehydrogena 33.4 44 0.0015 35.9 5.6 83 323-411 24-126 (347)
333 1ks9_A KPA reductase;, 2-dehyd 33.4 39 0.0013 35.3 5.1 85 323-415 5-102 (291)
334 1j4a_A D-LDH, D-lactate dehydr 33.0 19 0.00063 39.5 2.5 97 328-433 155-255 (333)
335 3qvo_A NMRA family protein; st 33.0 44 0.0015 33.9 5.3 83 323-411 28-125 (236)
336 4hy3_A Phosphoglycerate oxidor 32.4 34 0.0012 38.0 4.6 100 324-433 182-286 (365)
337 3b1j_A Glyceraldehyde 3-phosph 32.0 66 0.0022 35.3 6.7 42 369-411 81-123 (339)
338 3hn2_A 2-dehydropantoate 2-red 31.7 70 0.0024 34.2 6.9 50 364-416 58-109 (312)
339 2lqo_A Putative glutaredoxin R 31.6 93 0.0032 27.1 6.4 66 6-80 18-86 (92)
340 2d5c_A AROE, shikimate 5-dehyd 31.5 8.9 0.00031 40.3 -0.4 96 323-435 121-226 (263)
341 1yg6_A ATP-dependent CLP prote 31.5 49 0.0017 33.1 5.2 50 504-553 44-95 (193)
342 3hg7_A D-isomer specific 2-hyd 31.5 15 0.00052 40.2 1.5 101 324-433 146-250 (324)
343 3cps_A Glyceraldehyde 3-phosph 31.1 23 0.00079 39.2 2.9 42 369-411 95-137 (354)
344 3mwd_A ATP-citrate synthase; A 31.1 27 0.00094 39.6 3.5 98 461-559 273-389 (425)
345 2wm3_A NMRA-like family domain 31.0 42 0.0014 35.2 4.9 83 323-411 10-115 (299)
346 1xgk_A Nitrogen metabolite rep 31.0 52 0.0018 35.9 5.7 84 323-412 10-114 (352)
347 3hwr_A 2-dehydropantoate 2-red 30.6 51 0.0018 35.5 5.6 51 363-416 74-126 (318)
348 1qyc_A Phenylcoumaran benzylic 30.6 63 0.0022 33.8 6.2 22 323-344 9-30 (308)
349 1hdg_O Holo-D-glyceraldehyde-3 30.5 49 0.0017 36.2 5.4 100 305-411 14-121 (332)
350 2zcu_A Uncharacterized oxidore 30.5 38 0.0013 35.1 4.4 83 323-411 4-104 (286)
351 2r6j_A Eugenol synthase 1; phe 30.3 55 0.0019 34.7 5.7 80 323-407 16-112 (318)
352 3bf0_A Protease 4; bacterial, 30.2 45 0.0015 39.5 5.4 79 459-553 299-382 (593)
353 1ygy_A PGDH, D-3-phosphoglycer 30.1 22 0.00074 41.6 2.6 99 324-433 148-252 (529)
354 2g1u_A Hypothetical protein TM 29.7 1.7E+02 0.0057 27.4 8.5 84 323-413 24-121 (155)
355 3gg9_A D-3-phosphoglycerate de 29.5 7.8 0.00027 43.0 -1.3 101 324-433 166-271 (352)
356 3m9w_A D-xylose-binding peripl 29.4 1.4E+02 0.0046 31.3 8.6 139 379-526 98-247 (313)
357 3viv_A 441AA long hypothetical 29.3 81 0.0028 32.6 6.5 71 459-553 6-81 (230)
358 4ea9_A Perosamine N-acetyltran 29.0 67 0.0023 32.4 5.8 84 323-410 17-103 (220)
359 1wwk_A Phosphoglycerate dehydr 28.4 19 0.00064 39.0 1.5 95 324-426 148-247 (307)
360 2o3j_A UDP-glucose 6-dehydroge 28.4 76 0.0026 36.4 6.8 61 364-426 74-150 (481)
361 3pff_A ATP-citrate synthase; p 28.3 47 0.0016 40.9 5.1 61 260-320 653-714 (829)
362 2rir_A Dipicolinate synthase, 27.5 10 0.00035 40.8 -0.8 106 323-445 162-276 (300)
363 3bf0_A Protease 4; bacterial, 27.3 42 0.0014 39.8 4.4 47 503-549 75-127 (593)
364 1rzh_H Reaction center protein 27.2 40 0.0014 35.4 3.6 24 942-965 146-169 (260)
365 2wjn_H Reaction center protein 27.0 37 0.0013 35.6 3.3 24 942-965 150-173 (258)
366 2bka_A CC3, TAT-interacting pr 27.0 2E+02 0.0069 28.6 9.1 85 323-411 23-132 (242)
367 2d2i_A Glyceraldehyde 3-phosph 26.9 84 0.0029 35.0 6.5 43 368-411 80-123 (380)
368 3cmc_O GAPDH, glyceraldehyde-3 26.8 59 0.002 35.6 5.2 96 305-411 15-120 (334)
369 1sb8_A WBPP; epimerase, 4-epim 26.8 63 0.0021 34.8 5.5 22 323-344 32-53 (352)
370 2dbq_A Glyoxylate reductase; D 26.7 25 0.00086 38.4 2.2 96 323-426 155-255 (334)
371 2ew2_A 2-dehydropantoate 2-red 26.7 56 0.0019 34.5 4.9 38 378-415 74-113 (316)
372 2hmt_A YUAA protein; RCK, KTN, 26.6 55 0.0019 29.8 4.3 35 378-412 70-106 (144)
373 2yv3_A Aspartate-semialdehyde 26.5 50 0.0017 36.1 4.5 86 323-413 5-95 (331)
374 3nzo_A UDP-N-acetylglucosamine 26.5 2.3E+02 0.008 31.2 10.3 85 323-412 40-166 (399)
375 2x4g_A Nucleoside-diphosphate- 26.1 63 0.0022 34.4 5.3 22 323-344 18-39 (342)
376 4e5n_A Thermostable phosphite 26.1 25 0.00086 38.5 2.0 97 328-433 154-256 (330)
377 1eq2_A ADP-L-glycero-D-mannohe 25.8 1.1E+02 0.0036 32.0 6.9 84 323-411 4-116 (310)
378 3d4o_A Dipicolinate synthase s 25.7 15 0.00052 39.3 0.2 107 323-446 160-275 (293)
379 2jl1_A Triphenylmethane reduct 25.7 52 0.0018 34.1 4.4 85 323-412 5-108 (287)
380 3gpi_A NAD-dependent epimerase 25.4 51 0.0017 34.3 4.2 82 323-411 8-109 (286)
381 2i76_A Hypothetical protein; N 25.3 11 0.00036 40.0 -1.2 69 323-399 7-79 (276)
382 2yxb_A Coenzyme B12-dependent 25.0 76 0.0026 30.7 5.1 107 315-440 18-131 (161)
383 3st7_A Capsular polysaccharide 24.7 1.1E+02 0.0036 33.3 6.9 75 323-411 5-94 (369)
384 3ew7_A LMO0794 protein; Q8Y8U8 24.6 52 0.0018 32.5 4.0 29 323-355 5-33 (221)
385 1qyd_A Pinoresinol-lariciresin 24.2 97 0.0033 32.4 6.3 22 323-344 9-30 (313)
386 3uug_A Multiple sugar-binding 24.2 1.6E+02 0.0056 30.8 8.1 60 460-526 203-267 (330)
387 2gas_A Isoflavone reductase; N 23.9 84 0.0029 32.8 5.7 22 323-344 7-28 (307)
388 1ccw_A Protein (glutamate muta 23.5 51 0.0017 31.0 3.4 107 317-439 5-121 (137)
389 3n6x_A Putative glutathionylsp 23.2 1E+02 0.0035 35.4 6.4 56 18-79 342-399 (474)
390 3c1o_A Eugenol synthase; pheny 23.1 93 0.0032 32.8 5.9 80 323-407 9-110 (321)
391 3g17_A Similar to 2-dehydropan 21.8 30 0.001 36.8 1.6 87 324-416 8-102 (294)
392 3qwd_A ATP-dependent CLP prote 21.7 95 0.0032 31.4 5.2 63 490-553 29-96 (203)
393 2hk9_A Shikimate dehydrogenase 21.4 36 0.0012 35.9 2.1 97 324-435 135-239 (275)
394 3ecs_A Translation initiation 21.4 3E+02 0.01 29.7 9.4 106 379-490 122-229 (315)
395 4a29_A Engineered retro-aldol 21.2 1.2E+02 0.0042 31.8 6.0 26 460-485 202-227 (258)
396 1f0y_A HCDH, L-3-hydroxyacyl-C 21.2 38 0.0013 36.1 2.2 85 323-416 20-142 (302)
397 3ay3_A NAD-dependent epimerase 20.8 78 0.0027 32.5 4.5 29 323-355 7-35 (267)
398 2x5j_O E4PDH, D-erythrose-4-ph 20.4 1.3E+02 0.0045 32.9 6.3 44 369-412 82-126 (339)
No 1
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-112 Score=1029.25 Aligned_cols=575 Identities=23% Similarity=0.331 Sum_probs=481.1
Q ss_pred CCHHHHHHHHHHcCCC------CCCceeeCCH---HHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHH
Q psy3769 3 IYEYQGKEILRKFNVT------IPKGILCMNV---DEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYT 73 (974)
Q Consensus 3 L~E~~ak~lL~~~GIp------vp~~~~~~s~---eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~ 73 (974)
++|||+|+||++|++| .+++.+++++ +||.++++++|.+|||||+|+++|||||+|||++++|++|+++++
T Consensus 6 i~Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa 85 (829)
T 3pff_A 6 ISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (829)
T ss_dssp ECHHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HhHHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHH
Confidence 6899999999999999 5688787765 888888888876899999999999999999999999999999999
Q ss_pred HHHHhccccccccCCCCCceeEEEEEEEecc--ceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCC
Q psy3769 74 KKILGMQLITSQTNQEGENVFCVLIEEYIDI--KKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDP 151 (974)
Q Consensus 74 ~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~--~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p 151 (974)
++|+++.. +++..+.++++||||+|+++ ++|+|+|+++||. +|++++|.+||++||+++|+. .+++++|
T Consensus 86 ~~iLg~~~---~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~--gpvIm~s~eGGvdIE~vad~~----~~~~I~p 156 (829)
T 3pff_A 86 KPRLGQEA---TVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATRE--GDYVLFHHEGGVDVGDVDAKA----QKLLVGV 156 (829)
T ss_dssp TTTTTCEE---EETTEEEECCCEEEEECCCCCGGGEEEEEEEEETT--EEEEEEESSCSTTCCCHHHHS----EEEEEET
T ss_pred HHHHHHHH---hhcCCCceEEEEEEEecccCCCccEEEEEEEecCC--CCEEEEECCCCcchhhhhhhc----eEEecCC
Confidence 99998875 22334567899999999975 5999999999998 689999999999999999865 5689999
Q ss_pred CCCCCHHHHH-HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeeeCccccCCcc-c
Q psy3769 152 LIGLTKNNID-NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFDTNALFRHPE-I 229 (974)
Q Consensus 152 ~~gl~~~~a~-~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ldd~a~~r~~~-~ 229 (974)
..+++.++++ +++. |+++.+.+++++++.+||++|.+.|++++|||||+++++| ++|+|||+.+||||.|||++ |
T Consensus 157 ~~gl~~~~a~~~ll~--g~~~~d~~ala~~L~~Ly~lf~d~d~t~lEINPLvvt~dg-v~ALDAKi~lDDnA~fR~~~~~ 233 (829)
T 3pff_A 157 DEKLNPEDIKKHLLV--HAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKW 233 (829)
T ss_dssp TCCCCHHHHHHTTTT--TSCGGGHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTE-EEECCCEEEEEGGGHHHHHHHH
T ss_pred ccccCHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHhCCccEEEeeceEecCCc-eEEEeceeeeccchhhhCchhh
Confidence 9999999884 3332 6788999999999999999999999999999999999988 99999999999999999975 5
Q ss_pred cccccchhhhcccCChhhhhhc--------cCCCeEeecCCeEEEEecCcchhhHHHHHHHhcCC--CCceeeecCCCCC
Q psy3769 230 ISYQYAHKKYINKIDLMEIEAS--------KFDLTYIPLNGNIGCLVNGAGLAMATMDTIKLFGG--EPANFLDIGGGAT 299 (974)
Q Consensus 230 ~~~~~~~~~~~~~~~~~e~~a~--------~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~gg--~panfld~GG~a~ 299 (974)
..++++.+ +-.+.+++|.++. +++||||+||||||||||||||+|+|||+|+++|| +||||||+||+||
T Consensus 234 ~~~~~~~~-~~~~~~~~E~~~~e~~ak~~a~~~l~yv~ldG~Ig~mvNGaGlamaTmD~I~~~Gg~~~pANFlDvGGga~ 312 (829)
T 3pff_A 234 GDIEFPPP-FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPS 312 (829)
T ss_dssp CSCCCCCC-SSCCCCHHHHHHHHHHHTSSSEEEEEESCTTCSEEECCBSHHHHHHHHHHHHHTTCTTTBCEEEEEESCCC
T ss_pred hhhhcccc-ccccCChhhhhhhhhhhhhccccCccEEecCCeEEeeccCchHHHHHHHHHHHcCCCCCCceeEEecCCCC
Confidence 55455421 1122377776543 47899999999999999999999999999999999 7999999999999
Q ss_pred HHHHHHH----HHHHhhcCCeEEEEEcccc-ccCc---------------------------------------------
Q psy3769 300 IKTITEA----FKIMMQQNNLKTILVNIFG-ITGK--------------------------------------------- 329 (974)
Q Consensus 300 ~~~v~~a----~~~il~~~~~~~i~vni~G-~~~k--------------------------------------------- 329 (974)
.++|+++ |+++++||++|+||||||| ++++
T Consensus 313 ~e~v~~~~~~~l~ii~~d~~vk~ilvNIfGGI~~cd~VA~tf~GIi~A~k~~~~~~~~~~vPiVVRl~GtN~eeg~~il~ 392 (829)
T 3pff_A 313 EQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMG 392 (829)
T ss_dssp HHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSCCHHHHHHHHHHHHHHHHHHHHHTTEEEEEECBSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEecCCccchHHHHHHHhHHHHHHHHhhhhcccCCceEEEECCCCCHHHHHHHHH
Confidence 9999988 8899999999999999996 1100
Q ss_pred -cc-----------------------------------------------------------------------------
Q psy3769 330 -TG----------------------------------------------------------------------------- 331 (974)
Q Consensus 330 -~G----------------------------------------------------------------------------- 331 (974)
.|
T Consensus 393 ~~g~~lgl~i~v~g~e~~mt~iv~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (829)
T 3pff_A 393 EVGKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKP 472 (829)
T ss_dssp HHHHHHCCCEEEECTTSCTTHHHHHHHTSSCCC-----------------------------------------------
T ss_pred hCccccCCcEEEeCCcccHHHHHHHHhcccCCCCCCCccccccceeccCCCCCCCCCCCccccccccccccCCccccccc
Confidence 00
Q ss_pred ---------------c------------------cchhhhhccCC----CCceEEEEecCCCCC--ccc------ccccc
Q psy3769 332 ---------------R------------------FHTNLCLNYGN----GKKAFVAGVNPKKNG--QKF------EEIPI 366 (974)
Q Consensus 332 ---------------~------------------~v~~~l~~~g~----~g~~~V~pVnP~~~g--~~i------~G~~~ 366 (974)
+ +..++|+++|| .+++.|++|||+.+| +++ .|+||
T Consensus 473 ~~~~~~~~~~~~~~~~~~~l~~~~trviV~G~tg~~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~ 552 (829)
T 3pff_A 473 AMPQDSVPSPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPV 552 (829)
T ss_dssp --------------CCCSCCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEE
T ss_pred ccccccccccccccccceeeecCCCeEEEECCcHHHHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCccc
Confidence 0 01244455554 233489999999863 344 58999
Q ss_pred ccchhhhcccC-CCcEEEEEecchhHHHHHHHHHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccc
Q psy3769 367 FDTVKNAKNET-GATVSVIYVPAIFATSAIWEAIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIV 444 (974)
Q Consensus 367 y~sl~dip~~~-~vDlavi~vp~~~v~~~v~e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~ 444 (974)
|+|++|+|+.+ ++|++||++|++.++++++||++ +|+|.+||+|+||+|.++++|+++|| ++|+|++||||+|++|
T Consensus 553 y~sv~ea~~~~p~~DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~--~~g~rliGPNc~Gii~ 630 (829)
T 3pff_A 553 FKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKAD--QKGVTIIGPATVGGIK 630 (829)
T ss_dssp ESSHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHH--HHTCEEECSSCCCEEE
T ss_pred CCcHHHHhhccCCCcEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHH--HcCCEEEcCCCcccCc
Confidence 99999998754 48999999999999999999999 99999999999999999999999999 9999999999999999
Q ss_pred cCccccc--------cCCCCCCCCCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCc
Q psy3769 445 PEEIKIG--------IMPGNIHKKGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNT 516 (974)
Q Consensus 445 ~~~~~~~--------~~~~~~~~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t 516 (974)
|+....+ ++++..++||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|
T Consensus 631 p~~~~ig~~~g~lna~~~~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T 710 (829)
T 3pff_A 631 PGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGV 710 (829)
T ss_dssp TTTEECTTTTCSHHHHHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTC
T ss_pred cccccccccccccccccccccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCC
Confidence 9874433 55666789999999999999999999999999999999999999977799999999999999999
Q ss_pred cEEEEEEccCCCchHHHHHHHHh-cCCCCEEEEecccCCCC---CCCccCcccccccch----hceeeccccccceeeee
Q psy3769 517 DAVIMIGEIGGLDEIYAANWIKK-NMKKPVIGFIAGITAPP---GKRMGHAGALITEIK----KMTFLTASNGISIIQII 588 (974)
Q Consensus 517 ~~I~ly~E~~g~~~~~~~~f~~~-~~~KPVv~lk~Grs~~~---g~~~sHTgalag~~~----~~~a~~~q~gi~~~~li 588 (974)
++|++|+|..|..+.++.++++. +++||||++|+|||++. ++++|||||++|++. .++++++|+|+.++.
T Consensus 711 ~~Ivly~Ei~g~~f~~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~-- 788 (829)
T 3pff_A 711 KMIVVLGEIGGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR-- 788 (829)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCS--
T ss_pred CEEEEEEecCchHHHHHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcC--
Confidence 99999999654444445555543 58899999999999643 566899999999988 899999999988754
Q ss_pred ehhhhc
Q psy3769 589 LIDILL 594 (974)
Q Consensus 589 ~le~~L 594 (974)
.++++.
T Consensus 789 ~~~el~ 794 (829)
T 3pff_A 789 SFDELG 794 (829)
T ss_dssp SGGGHH
T ss_pred CHHHHH
Confidence 344443
No 2
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=100.00 E-value=3.9e-74 Score=655.98 Aligned_cols=340 Identities=37% Similarity=0.627 Sum_probs=323.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCC-cEEEEeeeecCccccc-------CeEEEeCCHHHHHHH
Q psy3769 1 MNIYEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGN-SWVIKAQIHAGGRGKC-------GGIKLAQSLEQVEKY 72 (974)
Q Consensus 1 m~L~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~-PvVvK~qi~~ggrgk~-------GGV~l~~s~ee~~~a 72 (974)
|+||||++|++|++||||||++.+++|++|+.++++++| + |+|+|+|+++|||||+ |||++++|++|++++
T Consensus 1 m~l~E~~aK~lL~~~GIpvp~~~~~~s~~ea~~~a~~lg-~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a 79 (395)
T 2fp4_B 1 MNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLN-AKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQL 79 (395)
T ss_dssp CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHT-CSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCcCCCCeEEECCHHHHHHHHHHcC-CCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999 8 8999999999999999 999999999999999
Q ss_pred HHHHHhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCC
Q psy3769 73 TKKILGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPL 152 (974)
Q Consensus 73 ~~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~ 152 (974)
+++|+++.++|+|+++.|.++++|+||||+++++|+|+++..||.+++|++++|.+||++||+++.++||++++++++|.
T Consensus 80 ~~~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~ 159 (395)
T 2fp4_B 80 AKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDII 159 (395)
T ss_dssp HHTTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTT
T ss_pred HHHHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCC
Confidence 99999998889999999998999999999999999999999999999899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeeeCccccCCcccccc
Q psy3769 153 IGLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFDTNALFRHPEIISY 232 (974)
Q Consensus 153 ~gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ldd~a~~r~~~~~~~ 232 (974)
.++++++++++++.+|+++.+.+++++++.+||++|.+.|++++|||||+++++|+++|+|||+.+||||.|||+++..+
T Consensus 160 ~~l~~~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~~~d~~~lEINPl~~~~~g~~~alDaki~~ddnA~~r~~~~~~~ 239 (395)
T 2fp4_B 160 EGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAM 239 (395)
T ss_dssp TCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEECTTSCEEECSEEEEECGGGGGGCHHHHTT
T ss_pred CCCCHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhhCCeEEEEeeeEEEcCCCCEEEEEeEEEecccccccCcchhhh
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred ccchhhhcccCChhhhhhccCCCeEeecCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCCHHHHHHHHHHHhh
Q psy3769 233 QYAHKKYINKIDLMEIEASKFDLTYIPLNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGATIKTITEAFKIMMQ 312 (974)
Q Consensus 233 ~~~~~~~~~~~~~~e~~a~~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~~~~v~~a~~~il~ 312 (974)
++++++ |+.|.+|++++|+|++|+||||||+|||||+|+|||+|+++||+||||||+||+|+.++++++++++++
T Consensus 240 ~d~~~~-----~~~e~~a~~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a~~e~~~~al~~il~ 314 (395)
T 2fp4_B 240 DDKSEN-----EPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTA 314 (395)
T ss_dssp CCCTTS-----CHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred cCCCcc-----ChhhhhHHHcCCceeccCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCCCHHHHHHHHHHHhC
Confidence 999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEcccc-ccCc--ccccchhhhhccCCCCc
Q psy3769 313 QNNLKTILVNIFG-ITGK--TGRFHTNLCLNYGNGKK 346 (974)
Q Consensus 313 ~~~~~~i~vni~G-~~~k--~G~~v~~~l~~~g~~g~ 346 (974)
||++++||||||| ++++ ...-+.+.+.+.+.+.|
T Consensus 315 d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~P 351 (395)
T 2fp4_B 315 DPKVEAILVNIFGGIVNCAIIANGITKACRELELKVP 351 (395)
T ss_dssp CTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCe
Confidence 9999999999998 5544 44445555655555544
No 3
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=100.00 E-value=2.9e-73 Score=648.52 Aligned_cols=340 Identities=41% Similarity=0.720 Sum_probs=323.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCc-EEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhc
Q psy3769 1 MNIYEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNS-WVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGM 79 (974)
Q Consensus 1 m~L~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~P-vVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~ 79 (974)
|+|+||++|++|++||||||++.+++|++|+.++++++| +| +|+|+|.+.|||||+|||++++|++|+++++++++++
T Consensus 1 m~l~E~~aK~lL~~~GIpvp~~~~~~s~eea~~aa~~lG-~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~ 79 (388)
T 2nu8_B 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIG-AGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGK 79 (388)
T ss_dssp CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHC-SSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHCCcCCCCeeEECCHHHHHHHHHHhC-CCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999 89 9999999889999999999999999999999999998
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHH
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNN 159 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~ 159 (974)
..+|+|+++.|..+++++||||+++++|+|+++..||.+++|++++|.+||+++|++++++||++.+++++|..++++++
T Consensus 80 ~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~ 159 (388)
T 2nu8_B 80 RLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQ 159 (388)
T ss_dssp EECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHH
T ss_pred hhhccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHH
Confidence 88899999988889999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeeeCccccCCccccccccchhhh
Q psy3769 160 IDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFDTNALFRHPEIISYQYAHKKY 239 (974)
Q Consensus 160 a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ldd~a~~r~~~~~~~~~~~~~~ 239 (974)
++++++.+|+++.+.+++++++.+||++|.++|++++|||||+++++|+++|+|||+.+||||.|||++|..+++++++
T Consensus 160 a~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~~d~~~lEINPl~~~~~g~~~alDaki~~dd~a~~r~~~~~~~~~~~~~- 238 (388)
T 2nu8_B 160 GRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQE- 238 (388)
T ss_dssp HHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTSCEEESCCEEEECGGGGGGCHHHHHHCCGGGS-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCEEEEEecceEEcCCCCEEEEeeEEEeCCchhccCcchhhhcCcccc-
Confidence 9999999999999999999999999999999999999999999999989999999999999999999999999999988
Q ss_pred cccCChhhhhhccCCCeEeecCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCCHHHHHHHHHHHhhcCCeEEE
Q psy3769 240 INKIDLMEIEASKFDLTYIPLNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGATIKTITEAFKIMMQQNNLKTI 319 (974)
Q Consensus 240 ~~~~~~~e~~a~~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~~~~v~~a~~~il~~~~~~~i 319 (974)
||.|.+|+++||+|++|+||||||+|||||+|+|||+|+++||+||||||+||+||.++++++++++++||++++|
T Consensus 239 ----~~~e~~a~~~~l~yv~l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a~~~~~~~~~~~il~d~~v~~i 314 (388)
T 2nu8_B 239 ----DPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAV 314 (388)
T ss_dssp ----CHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEE
T ss_pred ----ChhHHHHHHhcCCccCCCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCCCHHHHHHHHHHHhcCCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccc-ccCc--ccccchhhhhccCCCCc
Q psy3769 320 LVNIFG-ITGK--TGRFHTNLCLNYGNGKK 346 (974)
Q Consensus 320 ~vni~G-~~~k--~G~~v~~~l~~~g~~g~ 346 (974)
|||||| .+++ ...-+++.+.+.+.+.|
T Consensus 315 lvni~ggi~~~~~vA~gii~a~~~~~~~~p 344 (388)
T 2nu8_B 315 LVNIFGGIVRCDLIADGIIGAVAEVGVNVP 344 (388)
T ss_dssp EEEEESCSSCHHHHHHHHHHHHHHHTCCSC
T ss_pred EEEecCCcCCchHHHHHHHHHHHhcCCCCe
Confidence 999998 5553 34445555556555544
No 4
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=100.00 E-value=5.7e-71 Score=630.84 Aligned_cols=332 Identities=38% Similarity=0.650 Sum_probs=311.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcc
Q psy3769 1 MNIYEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQ 80 (974)
Q Consensus 1 m~L~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~ 80 (974)
|+|+|||||++|++||||||++.+++|++|+.++++++| +|||+|+|.+.|||||+|||++++|++|+++++++|+++.
T Consensus 1 m~L~E~~aK~lL~~~GIpvp~~~~~~s~eea~~aa~~lG-~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~ 79 (397)
T 3ufx_B 1 MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEFG-KRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMN 79 (397)
T ss_dssp CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHT-SCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHHcC-CCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999 9999999998899999999999999999999999999876
Q ss_pred ccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHH
Q psy3769 81 LITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNI 160 (974)
Q Consensus 81 ~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a 160 (974)
. .|..+++++||||+++++|+|+|+++||.+++|++++|.+||++||++++++||++++++++|..+++++++
T Consensus 80 ~-------~g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~~s~~GGv~iE~~a~~~pd~i~~~~i~~~~~l~~~~a 152 (397)
T 3ufx_B 80 I-------KGLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEA 152 (397)
T ss_dssp E-------TTEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCCSSCHHHHHHHCGGGCEEEECBTTTBCCHHHH
T ss_pred c-------cCCccceEEEEEeecCCeeEEEEEEecCCCCCcEEEEeCCCCccHhhhcccCccceEEEecCCCCCCCHHHH
Confidence 5 566788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeeeCccccCCccccccccchhhhc
Q psy3769 161 DNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFDTNALFRHPEIISYQYAHKKYI 240 (974)
Q Consensus 161 ~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ldd~a~~r~~~~~~~~~~~~~~~ 240 (974)
++|++++|+++. .+++.+++.+||++|.++|.+++|||||+++++|+++|+|||+++||||.||||+|+.+++++++
T Consensus 153 ~~~~~~lG~~g~-~~~l~~~l~~l~~l~~~~~~~~lEINPL~~~~~g~~~alDaki~~ddnA~~r~~~~~~~~~~~~~-- 229 (397)
T 3ufx_B 153 REMVKRAGLEGN-LNKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLAELREVEAE-- 229 (397)
T ss_dssp HHHHHHHTCCSC-HHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTSCEEESSCEEEECGGGGGGCHHHHTTHHHHCS--
T ss_pred HHHHHHcCCchH-HHHHHHHHHHHHHHHHcCCccEEEeeceEECCCCCEEEEEeEEEecCcchhcchhhhhhcCcccC--
Confidence 999999999988 99999999999999999999999999999999988999999999999999999999999999998
Q ss_pred ccCChhhhhhccCCCeEeecCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCCHHHHHHHHHHHhhcCCeEEEE
Q psy3769 241 NKIDLMEIEASKFDLTYIPLNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGATIKTITEAFKIMMQQNNLKTIL 320 (974)
Q Consensus 241 ~~~~~~e~~a~~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~~~~v~~a~~~il~~~~~~~i~ 320 (974)
||+|.+|+++|||||+|+||||||+|||||+|+|||++..+||+||||+|+||++++++++++++++++||++++||
T Consensus 230 ---~~~e~~a~~~~l~yv~l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~il 306 (397)
T 3ufx_B 230 ---HPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVF 306 (397)
T ss_dssp ---SHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEE
T ss_pred ---CHhHHHHHHcCCCcccCCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecccc-ccCc--ccccchhhhhccCCCCc
Q psy3769 321 VNIFG-ITGK--TGRFHTNLCLNYGNGKK 346 (974)
Q Consensus 321 vni~G-~~~k--~G~~v~~~l~~~g~~g~ 346 (974)
|||+| .+++ ....+.+.+.+.+.+.|
T Consensus 307 v~i~ggi~~~~~vA~~i~~a~~~~~~~kP 335 (397)
T 3ufx_B 307 INIFGGITRADEVAKGVIRALEEGLLTKP 335 (397)
T ss_dssp EEEEEEEEESHHHHHHHHHHHTTTCCCSC
T ss_pred EECCCCCCCHHHHHHHHHHHHHhhCCCCc
Confidence 99998 4433 33344444444433433
No 5
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=100.00 E-value=3.1e-67 Score=600.30 Aligned_cols=314 Identities=21% Similarity=0.279 Sum_probs=272.8
Q ss_pred CCHHHHHHHHHHcCC---C---CCCceeeCCH---HHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHH
Q psy3769 3 IYEYQGKEILRKFNV---T---IPKGILCMNV---DEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYT 73 (974)
Q Consensus 3 L~E~~ak~lL~~~GI---p---vp~~~~~~s~---eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~ 73 (974)
++|||+|+||++|++ | .+++.+++++ +||.++++++|.+|||+|+|+++|||||+|||+++.|++|+++++
T Consensus 6 i~Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa 85 (425)
T 3mwd_A 6 ISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (425)
T ss_dssp ECHHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HhHHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHH
Confidence 689999999999999 4 2347777655 999999999987899999999999999999999999999999999
Q ss_pred HHHHhccccccccCCCCCceeEEEEEEEecc--ceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCC
Q psy3769 74 KKILGMQLITSQTNQEGENVFCVLIEEYIDI--KKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDP 151 (974)
Q Consensus 74 ~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~--~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p 151 (974)
++|+++.. +++..+.++++|+||+|+++ ++|+|+|+++||. +|++++|++||++||+++|++ .+++++|
T Consensus 86 ~~ml~~~~---~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~--gpvI~~s~~GGv~IE~vad~~----~~~~i~~ 156 (425)
T 3mwd_A 86 KPRLGQEA---TVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATRE--GDYVLFHHEGGVDVGDVDAKA----QKLLVGV 156 (425)
T ss_dssp TTTTTCEE---EETTEEEECCCEEEEECCCCCGGGEEEEEEEEETT--EEEEEEESSCSTTCCSHHHHS----EEEEEET
T ss_pred HHHHhhhh---hccCCCceEEEEEEEecccCCCCceEEEEEEecCC--CCEEEEECCCCccHhHhhccc----ceEecCC
Confidence 99998875 33344567889999999975 5999999999998 689999999999999999876 3678888
Q ss_pred CCCCCHHHHH-HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeeeCccccCCcc-c
Q psy3769 152 LIGLTKNNID-NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFDTNALFRHPE-I 229 (974)
Q Consensus 152 ~~gl~~~~a~-~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ldd~a~~r~~~-~ 229 (974)
..+++.++++ +++ .|+++.+.+++++++.+||++|.++|++++|||||+++++| ++|+|||+.+||||.|||++ |
T Consensus 157 ~~~l~~~~~~~~ll--~g~~~~d~~~la~~l~~L~~lf~d~d~~~lEINPLvvt~~g-v~AlDAki~lDDnA~fR~~~~~ 233 (425)
T 3mwd_A 157 DEKLNPEDIKKHLL--VHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKW 233 (425)
T ss_dssp TCCCCHHHHHHTTT--TTSCTTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTE-EEECCEEEEEEGGGHHHHHHHH
T ss_pred ccccCHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHhCCccEEEeeeeEEcCCc-eEEEeceeecccchhhhChhhh
Confidence 8888887774 232 26788999999999999999999999999999999999988 99999999999999999975 5
Q ss_pred cccccchhhhcccCChhhhhhc--------cCCCeEeecCCeEEEEecCcchhhHHHHHHHhcCC--CCceeeecCCCCC
Q psy3769 230 ISYQYAHKKYINKIDLMEIEAS--------KFDLTYIPLNGNIGCLVNGAGLAMATMDTIKLFGG--EPANFLDIGGGAT 299 (974)
Q Consensus 230 ~~~~~~~~~~~~~~~~~e~~a~--------~~~l~yv~l~G~Ig~~~nGaGlam~t~D~i~~~gg--~panfld~GG~a~ 299 (974)
..++++.+ +-.+.+|+|.++. ++|||||+|+||||||||||||+|+|||+|+++|| +||||||+||+||
T Consensus 234 ~~~~~~~~-~~~~~~~~E~~~~e~~a~~~~~~~l~yv~ldG~Ig~mvNGaGlamat~D~i~~~Gg~~~pANflD~gG~a~ 312 (425)
T 3mwd_A 234 GDIEFPPP-FGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPS 312 (425)
T ss_dssp CSCCCCCC-SSSCCCHHHHHHHHHHHTSSSEEEEEESCTTCSEEECCBSHHHHHHHHHHHHHTTCGGGBCEEEEEESCCC
T ss_pred hhhhcccc-ccccCChhhhhhhhhhhhhhhccCccEEecCCeEEEEecCchHHHHHHHHHHHcCCCcCCcceEEecCCCC
Confidence 55555521 1112377776553 57899999999999999999999999999999999 7999999999999
Q ss_pred HHHHHHH----HHHHhhcCCeEEEEEcccc-ccCc
Q psy3769 300 IKTITEA----FKIMMQQNNLKTILVNIFG-ITGK 329 (974)
Q Consensus 300 ~~~v~~a----~~~il~~~~~~~i~vni~G-~~~k 329 (974)
+++|+++ |+++++||++|+||||||| ++++
T Consensus 313 ~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~c 347 (425)
T 3mwd_A 313 EQQTYDYAKTILSLMTREKHPDGKILIIGGSIANF 347 (425)
T ss_dssp HHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSS
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccH
Confidence 9999985 9999999999999999999 4443
No 6
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=7.1e-56 Score=489.12 Aligned_cols=269 Identities=47% Similarity=0.835 Sum_probs=235.5
Q ss_pred HhhcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCC-CcEEEEEecc
Q psy3769 310 MMQQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETG-ATVSVIYVPA 388 (974)
Q Consensus 310 il~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~-vDlavi~vp~ 388 (974)
++-+|+.+++ ++|.+++.|+.++++++++||+ .|+||||+.+|+++.|+|||+|++|+|++++ +|++++++|+
T Consensus 8 ~l~~~~~~vv---V~Gasg~~G~~~~~~l~~~g~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~ 81 (297)
T 2yv2_A 8 VLVDSETRVL---VQGITGREGSFHAKAMLEYGTK---VVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPA 81 (297)
T ss_dssp -CCSTTCEEE---EETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCG
T ss_pred HhhCCCCEEE---EECCCCCHHHHHHHHHHhCCCc---EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCH
Confidence 3557888887 3688888899999999999998 6999999976688999999999999986434 9999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCccccccCCCCCCCCCCEEEEeC
Q psy3769 389 IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRIGVVSR 468 (974)
Q Consensus 389 ~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~va~vSQ 468 (974)
+.+++++++|+++|++.+||+|+||++++++++.++|+ ++|++++||||+|++||+.++++++++..++||+||+|||
T Consensus 82 ~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~--~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSq 159 (297)
T 2yv2_A 82 PFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYAR--QKGATIIGPNCPGAITPGQAKVGIMPGHIFKEGGVAVVSR 159 (297)
T ss_dssp GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHH--HHTCEEECSSSCEEEETTTEEEESCCGGGCCEEEEEEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HcCCEEEcCCCCeeEcccccceeecccCCCCCCCEEEEEC
Confidence 99999999999999999999999999998899999999 9999999999999999998888888777788999999999
Q ss_pred ChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh-cCCCCEEE
Q psy3769 469 SGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK-NMKKPVIG 547 (974)
Q Consensus 469 SG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~-~~~KPVv~ 547 (974)
||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|++|+|++|++|++.++|+++ +++||||+
T Consensus 160 SG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~~~~~KPVv~ 239 (297)
T 2yv2_A 160 SGTLTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKKGEFTKPVIA 239 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHTTSCCSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhccCCCCEEE
Confidence 99999999999999999999999999997668899999999999999999999999999988889999998 78999999
Q ss_pred EecccCCCCCCCccCccccc----ccchhceeeccccccceee
Q psy3769 548 FIAGITAPPGKRMGHAGALI----TEIKKMTFLTASNGISIIQ 586 (974)
Q Consensus 548 lk~Grs~~~g~~~sHTgala----g~~~~~~a~~~q~gi~~~~ 586 (974)
+|+|||++.|+++|||||++ |+++.++++++|+|+.++.
T Consensus 240 ~k~G~s~~~~~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~ 282 (297)
T 2yv2_A 240 YIAGRTAPPEKRMGHAGAIIMMGTGTYEGKVKALREAGVEVAE 282 (297)
T ss_dssp EESCCC------------------CSHHHHHHHHHTTTCEEES
T ss_pred EEeCCCCccccccCCccccccCCCCCHHHHHHHHHHcCCeEeC
Confidence 99999976888899999999 7999999999999977654
No 7
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=2.7e-55 Score=485.53 Aligned_cols=269 Identities=55% Similarity=0.918 Sum_probs=248.1
Q ss_pred HhhcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch
Q psy3769 310 MMQQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI 389 (974)
Q Consensus 310 il~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~ 389 (974)
.+-+|+.++| ++|.+++.|+.++++++++||+ .++||||+..|+++.|+|||+|++|+|+++++|++++++|++
T Consensus 9 ~l~~~~siaV---V~Gasg~~G~~~~~~l~~~G~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~ 82 (305)
T 2fp4_A 9 LYVDKNTKVI---CQGFTGKQGTFHSQQALEYGTN---LVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPP 82 (305)
T ss_dssp GCCCTTCEEE---EETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH
T ss_pred HHhCCCcEEE---EECCCCCHHHHHHHHHHHCCCc---EEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHH
Confidence 3457888887 2488788899999999999998 699999997567899999999999999755899999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCC-CceEEccCCccccccCccccccCCCCCCCCCCEEEEeC
Q psy3769 390 FATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNS-KTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRIGVVSR 468 (974)
Q Consensus 390 ~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~-gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~va~vSQ 468 (974)
.++++++||+++|+|.+||+++|+++++++++.+.|+ ++ |++++||||+|+++|+.++++++++..++||+||+|||
T Consensus 83 ~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~--~~~gi~liGPnc~Gii~p~~~~~~~~~~~~~~~G~va~vSq 160 (305)
T 2fp4_A 83 FAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLL--RQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSR 160 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHT--TCSSCEEECSSSCEEEETTTEEEESSCGGGCCEEEEEEEES
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHH--hcCCcEEEeCCCCeEecccccceeeccccCCCCCCEEEEec
Confidence 9999999999999999999999999888889999999 99 99999999999999999888888877788999999999
Q ss_pred ChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh----cCCCC
Q psy3769 469 SGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK----NMKKP 544 (974)
Q Consensus 469 SG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~----~~~KP 544 (974)
||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|++|+|++|+.|.++++|+++ +++||
T Consensus 161 SG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~~~~KP 240 (305)
T 2fp4_A 161 SGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKP 240 (305)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCSTTCCC
T ss_pred chHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999997668999999999999999999999999999988899999998 34899
Q ss_pred EEEEecccCCCCCCCccCccccc----ccchhceeeccccccceee
Q psy3769 545 VIGFIAGITAPPGKRMGHAGALI----TEIKKMTFLTASNGISIIQ 586 (974)
Q Consensus 545 Vv~lk~Grs~~~g~~~sHTgala----g~~~~~~a~~~q~gi~~~~ 586 (974)
||++|+|||++.|+++||||+++ |+++.++++++|+|+.++.
T Consensus 241 Vv~~k~G~s~~~g~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~ 286 (305)
T 2fp4_A 241 VVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVVSM 286 (305)
T ss_dssp EEEEEECTTCCTTCCCSSTTCCCBTTBCCHHHHHHHHHHTTCEECS
T ss_pred EEEEEecCCccccccccchhhhhccCCccHHHHHHHHHHCCCeEeC
Confidence 99999999966788899999999 7999999999999977643
No 8
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=1.5e-55 Score=484.46 Aligned_cols=267 Identities=48% Similarity=0.838 Sum_probs=233.4
Q ss_pred hcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhH
Q psy3769 312 QQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 312 ~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v 391 (974)
-+++.+++ ++|.+++.|+.++++++++||+ .++||||+.+|+++.|+|||+|++|+|+++++|++++++|++.+
T Consensus 4 ~~~~~~Va---VvGasG~~G~~~~~~l~~~g~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~ 77 (288)
T 1oi7_A 4 VNRETRVL---VQGITGREGQFHTKQMLTYGTK---IVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAA 77 (288)
T ss_dssp CCTTCEEE---EETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHH
T ss_pred cCCCCEEE---EECCCCCHHHHHHHHHHHcCCe---EEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHH
Confidence 35566666 4788888899999999999998 69999999866789999999999999876689999999999999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCccccccCCCCCCCCCCEEEEeCChh
Q psy3769 392 TSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRIGVVSRSGT 471 (974)
Q Consensus 392 ~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~va~vSQSG~ 471 (974)
++++++|+++|++.+||+|+||++++++++.+.|+ ++|++++||||+|++||+.++++++++..++||+||+|||||+
T Consensus 78 ~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~--~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~~G~va~vsqSG~ 155 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIK--ALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGT 155 (288)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHH--HHTCEEEESSSCEEEETTTEEEESSCGGGCCEEEEEEEESCHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HcCCEEEeCCCCeEEcCCCceeEEcccCCCCCCCEEEEECCHH
Confidence 99999999999999999999999998899999999 9999999999999999999888888777788999999999999
Q ss_pred hHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHhcCCCCEEEEecc
Q psy3769 472 LTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKKNMKKPVIGFIAG 551 (974)
Q Consensus 472 ~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~~~~KPVv~lk~G 551 (974)
+++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|++|+|++|++|++.++|++++++||||++|+|
T Consensus 156 l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~~~~KPVv~~k~G 235 (288)
T 1oi7_A 156 LTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKDHMKKPVVGFIGG 235 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHHHCCSCEEEEESC
T ss_pred HHHHHHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhcCCCCEEEEEec
Confidence 99999999999999999999999997668999999999999999999999999999988889999987789999999999
Q ss_pred cCCCCCCCccCccccc----ccchhceeeccccccceee
Q psy3769 552 ITAPPGKRMGHAGALI----TEIKKMTFLTASNGISIIQ 586 (974)
Q Consensus 552 rs~~~g~~~sHTgala----g~~~~~~a~~~q~gi~~~~ 586 (974)
||++.|+++|||||++ |+++.++++++|+|+.++.
T Consensus 236 ~~~~~~~~~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~ 274 (288)
T 1oi7_A 236 RSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVAD 274 (288)
T ss_dssp C------------------CCSHHHHHHHHHHHTCCBCS
T ss_pred CCCCccccCcchhhcccCCCCCHHHHHHHHHHCCCeEeC
Confidence 9966888899999999 7999999999999977654
No 9
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.3e-55 Score=484.40 Aligned_cols=265 Identities=49% Similarity=0.837 Sum_probs=232.0
Q ss_pred cCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHH
Q psy3769 313 QNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFAT 392 (974)
Q Consensus 313 ~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~ 392 (974)
+|+.+++ ++|.+++.|+.++++++++||+ .|+||||+.+++++.|+|||+|++|+|+++++|++++++|++.++
T Consensus 11 ~~~~~v~---V~Gasg~~G~~~~~~l~~~g~~---~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~ 84 (294)
T 2yv1_A 11 DENTKAI---VQGITGRQGSFHTKKMLECGTK---IVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAK 84 (294)
T ss_dssp CTTCCEE---EETTTSHHHHHHHHHHHHTTCC---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHH
T ss_pred CCCCEEE---EECCCCCHHHHHHHHHHhCCCe---EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHHH
Confidence 6788876 3688888899999999999998 699999997667899999999999998655799999999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCccccccCCCCCCCCCCEEEEeCChhh
Q psy3769 393 SAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRIGVVSRSGTL 472 (974)
Q Consensus 393 ~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~va~vSQSG~~ 472 (974)
+++++|+++|++.+||+|+||++++++++.++|+ ++|++++||||+|++||+.++++++++..++||+||+|||||++
T Consensus 85 ~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~--~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l 162 (294)
T 2yv1_A 85 DAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAE--DVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTL 162 (294)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHH--HHTCEEECSSCCEEEETTTEEEECCCGGGCCEEEEEEEESCSHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HcCCEEEcCCCceeeccCcceeeecccCCCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999999999 99999999999999999998888887777889999999999999
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHhcCCCCEEEEeccc
Q psy3769 473 TYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKKNMKKPVIGFIAGI 552 (974)
Q Consensus 473 ~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~~~~KPVv~lk~Gr 552 (974)
++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|++|+|++|++|+++++|+++ ++||||++|+||
T Consensus 163 ~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~-~~KPVv~~k~G~ 241 (294)
T 2yv1_A 163 TYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK-MKKPVIGYIAGQ 241 (294)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTT-CSSCEEEEEECC
T ss_pred HHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-CCCCEEEEEecC
Confidence 9999999999999999999999997668999999999999999999999999999988788888876 799999999999
Q ss_pred CCCCCCCccCccccc----ccchhceeeccccccceee
Q psy3769 553 TAPPGKRMGHAGALI----TEIKKMTFLTASNGISIIQ 586 (974)
Q Consensus 553 s~~~g~~~sHTgala----g~~~~~~a~~~q~gi~~~~ 586 (974)
|++.|+++|||||++ |+++.++++++|+|+.++.
T Consensus 242 ~~~~g~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~ 279 (294)
T 2yv1_A 242 SAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAK 279 (294)
T ss_dssp -------------------CCHHHHHHHHHHHTCEECS
T ss_pred CCCccccCCchhhhccCCCCCHHHHHHHHHHCCCeEeC
Confidence 976888899999999 7999999999999977654
No 10
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=1.5e-53 Score=469.23 Aligned_cols=268 Identities=51% Similarity=0.885 Sum_probs=246.6
Q ss_pred hhcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchh
Q psy3769 311 MQQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIF 390 (974)
Q Consensus 311 l~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~ 390 (974)
+-+++.++. ++|.+++.|+.++++++++||+ .|++|||+..++++.|+|||+|++|+++++++|++++++|++.
T Consensus 3 ~~~~~~rVa---ViG~sG~~G~~~~~~l~~~g~~---~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~ 76 (288)
T 2nu8_A 3 LIDKNTKVI---CQGFTGSQGTFHSEQAIAYGTK---MVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPF 76 (288)
T ss_dssp SCCTTCEEE---EETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGG
T ss_pred ecCCCCEEE---EECCCChHHHHHHHHHHHCCCe---EEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHH
Confidence 345667766 4687789999999999998987 7999999864578999999999999986457999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCccccccCCCCCCCCCCEEEEeCCh
Q psy3769 391 ATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRIGVVSRSG 470 (974)
Q Consensus 391 v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~va~vSQSG 470 (974)
+++++++|+++|++.+|++++|+++++++++.+.|+ ++|++++||||+|++||..++++++++..++||+||+|||||
T Consensus 77 ~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~--~~gv~liGPNc~Gi~~p~~~~~~~~~~~~~~~G~i~~vsqSG 154 (288)
T 2nu8_A 77 CKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD--EAGVRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSG 154 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHH--HHTCEEECSSCCEEEETTTEEEESSCTTSCCEEEEEEEESCH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HcCCEEEecCCcceecCCcceeEecccCCCCCCCEEEEECcH
Confidence 999999999999999999999999988889999999 999999999999999999888888887778899999999999
Q ss_pred hhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHhcCCCCEEEEec
Q psy3769 471 TLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKKNMKKPVIGFIA 550 (974)
Q Consensus 471 ~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~~~~KPVv~lk~ 550 (974)
++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+|++|++|+|++|++|+++++|++++++||||++|+
T Consensus 155 ~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~~~~KPVv~~k~ 234 (288)
T 2nu8_A 155 TLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIA 234 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHHHCCSCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 99999999999999999999999999766899999999999999999999999999998889999999888999999999
Q ss_pred ccCCCCCCCccCccccc----ccchhceeeccccccceee
Q psy3769 551 GITAPPGKRMGHAGALI----TEIKKMTFLTASNGISIIQ 586 (974)
Q Consensus 551 Grs~~~g~~~sHTgala----g~~~~~~a~~~q~gi~~~~ 586 (974)
|||++.|+++||||+++ |+++.++++++|+|+.++.
T Consensus 235 G~~~~~g~~~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~ 274 (288)
T 2nu8_A 235 GVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVR 274 (288)
T ss_dssp CTTCCTTCCCSSTTCCCCTTCCCHHHHHHHHHHTTCEECS
T ss_pred CCCCcccccccchhhhhccCCccHHHHHHHHHHCCCeEeC
Confidence 99966788899999999 7999999999999977654
No 11
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=2.2e-52 Score=487.63 Aligned_cols=288 Identities=19% Similarity=0.271 Sum_probs=235.3
Q ss_pred cCCeEEEEEcccc---ccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch
Q psy3769 313 QNNLKTILVNIFG---ITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI 389 (974)
Q Consensus 313 ~~~~~~i~vni~G---~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~ 389 (974)
+|+..+| +| .+++.|+.++++|+++| .+ .||||||++ +++.|+|||+|++|+|+ ++|+++|++|++
T Consensus 7 ~p~siAV----vGas~~~~~~g~~v~~~l~~~g-~~--~v~pVnP~~--~~i~G~~~y~sl~~lp~--~~Dlavi~vp~~ 75 (457)
T 2csu_A 7 NPKGIAV----IGASNDPKKLGYEVFKNLKEYK-KG--KVYPVNIKE--EEVQGVKAYKSVKDIPD--EIDLAIIVVPKR 75 (457)
T ss_dssp SCSEEEE----ETCCSCTTSHHHHHHHHHTTCC-SS--EEEEECSSC--SEETTEECBSSTTSCSS--CCSEEEECSCHH
T ss_pred CCCeEEE----ECcCCCCCchHHHHHHHHHHcC-CC--EEEEECCCC--CeECCEeccCCHHHcCC--CCCEEEEecCHH
Confidence 3665555 56 45578999999999998 76 899999997 89999999999999997 899999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEcCCCChHH------HHHHHHHHhcCCCCceEEccCCccccccCccccccCCCCCCCCCCE
Q psy3769 390 FATSAIWEAIESELELVICITEGIPVRD------MLILKNKMKKNNSKTLLLGPNCPGLIVPEEIKIGIMPGNIHKKGRI 463 (974)
Q Consensus 390 ~v~~~v~e~~~~gv~~~vi~s~G~~e~~------~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~~~~~~~~~~~~G~v 463 (974)
.++++++||+++|+|.+||+++||+|.+ +++++++|+ ++|+|++||||+|++||+.+++.++.+..+. |+|
T Consensus 76 ~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~--~~g~~viGPnc~Gv~~~~~~~~~~~~~~~~~-G~v 152 (457)
T 2csu_A 76 FVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAH--KYGMRIIGPNCVGIMNTHVDLNATFITVAKK-GNV 152 (457)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHH--HHTCEEECSSCCEEEEGGGTEEEESSCCCEE-CSE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHH--HcCCEEEcCCcceEEccCCCceeeecCCCCC-CCE
Confidence 9999999999999999999999998643 578999999 9999999999999999998887776555455 999
Q ss_pred EEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh----
Q psy3769 464 GVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK---- 539 (974)
Q Consensus 464 a~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~---- 539 (974)
|+|||||++++++++|+.++|+|||++||+||++ |+++.|+|+||.+||+|++|++|+|++ +|+++|+++
T Consensus 153 ~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~~E~i----~~~~~f~~~a~~~ 226 (457)
T 2csu_A 153 AFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEGV----RNGKKFMEVAKRV 226 (457)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESCC----SCHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEEEecC----CCHHHHHHHHHHh
Confidence 9999999999999999999999999999999995 999999999999999999999999999 568899887
Q ss_pred cCCCCEEEEecccCCCCCCC--ccCcccccccchhceeeccccccceeeeeehhhhcChhHHHHHHHHcccCCccccceE
Q psy3769 540 NMKKPVIGFIAGITAPPGKR--MGHAGALITEIKKMTFLTASNGISIIQIILIDILLGSTDAIIIALACRNLQPNIRTKG 617 (974)
Q Consensus 540 ~~~KPVv~lk~Grs~~~g~~--~sHTgalag~~~~~~a~~~q~gi~~~~li~le~~Ls~Dn~~vial~~~~lp~~~r~~a 617 (974)
+++||||++|+|||+ .|++ +||||+++|+++.++++++|.|+..+. .. +++......+...++++++.+
T Consensus 227 ~~~KPVv~~k~G~~~-~g~~aa~~Htgalag~~~~~~AafRqaGv~~v~--~~------~El~~~~~~l~~~~~~g~rva 297 (457)
T 2csu_A 227 TKKKPIIALKAGKSE-SGARAASSHTGSLAGSWKIYEAAFKQSGVLVAN--TI------DEMLSMARAFSQPLPRGNKVA 297 (457)
T ss_dssp HHHSCEEEEECC-------------------CHHHHHHHHHHTTCEEES--SH------HHHHHHHTTTTSCCCSSSEEE
T ss_pred cCCCCEEEEEcCCCc-cccchhhcccCccCCcHHHHHHHHHhCCCeEEC--CH------HHHHHHHHHhcCCCCCCCcEE
Confidence 578999999999995 6776 699999999999999999999976433 22 233233333333335788999
Q ss_pred EEehhHHHHHHH
Q psy3769 618 IIFGTFGAIAIR 629 (974)
Q Consensus 618 i~~g~~ga~~~R 629 (974)
+++.++|..++-
T Consensus 298 iitngGG~~~la 309 (457)
T 2csu_A 298 IMTNAGGPGVLT 309 (457)
T ss_dssp EEESCHHHHHHH
T ss_pred EEECCHHHHHHH
Confidence 999999977654
No 12
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=2.2e-50 Score=447.87 Aligned_cols=271 Identities=23% Similarity=0.361 Sum_probs=217.4
Q ss_pred hhcCCeEEEEEccccccCcccccchhhhhccCC----CCceEEEEecCCCCC--cccc------ccccccchhhhcccC-
Q psy3769 311 MQQNNLKTILVNIFGITGKTGRFHTNLCLNYGN----GKKAFVAGVNPKKNG--QKFE------EIPIFDTVKNAKNET- 377 (974)
Q Consensus 311 l~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~----~g~~~V~pVnP~~~g--~~i~------G~~~y~sl~dip~~~- 377 (974)
|-++++|+|+ +|.++| +.++++++|| .++..|++|||+.+| +++. |+|||+|++|+++.+
T Consensus 6 l~~~~tkviV---~G~~Gk----~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p 78 (334)
T 3mwd_B 6 LFSRHTKAIV---WGMQTR----AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHP 78 (334)
T ss_dssp CCCTTCCEEE---ESCCHH----HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCT
T ss_pred ccCCCCeEEE---ECCchH----HHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeCCHHHHhhcCC
Confidence 4578899984 666655 4667777765 222389999999854 5554 899999999998654
Q ss_pred CCcEEEEEecchhHHHHHHHHHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCcc--------
Q psy3769 378 GATVSVIYVPAIFATSAIWEAIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEI-------- 448 (974)
Q Consensus 378 ~vDlavi~vp~~~v~~~v~e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~-------- 448 (974)
++|++++++|++.+.+.+.|+++ +|+|.++++|+||+++++++++++|| ++|+|++||||+|++||+..
T Consensus 79 ~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~--~~g~rliGPNc~Gii~p~~~~ig~~~~~ 156 (334)
T 3mwd_B 79 EVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKAD--QKGVTIIGPATVGGIKPGCFKIGNTGGM 156 (334)
T ss_dssp TCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHH--HHTCEEECSSCCCEEETTTEECTTTTCS
T ss_pred CCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HcCCEEEccCCccccCcchhhccccccc
Confidence 48999999999999777666555 99999999999999999999999999 99999999999999999742
Q ss_pred ccccCCCCCCCCCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCC
Q psy3769 449 KIGIMPGNIHKKGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGL 528 (974)
Q Consensus 449 ~~~~~~~~~~~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~ 528 (974)
+++++++..++||+||+|||||++++++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|++|.|..|.
T Consensus 157 ~~a~~~~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~ 236 (334)
T 3mwd_B 157 LDNILASKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGT 236 (334)
T ss_dssp HHHHHHTTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSS
T ss_pred ccccccccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCCh
Confidence 34456666789999999999999999999999999999999999999966699999999999999999999999776555
Q ss_pred chHHHHHHHHh----cCCCCEEEEecccCCCC---CCCccCcccccccch----hceeeccccccceeeeeehhhhcC
Q psy3769 529 DEIYAANWIKK----NMKKPVIGFIAGITAPP---GKRMGHAGALITEIK----KMTFLTASNGISIIQIILIDILLG 595 (974)
Q Consensus 529 ~~~~~~~f~~~----~~~KPVv~lk~Grs~~~---g~~~sHTgalag~~~----~~~a~~~q~gi~~~~li~le~~Ls 595 (974)
.+ ++|+++ +++||||++|+|||++. ++++|||||++|++. .++++++|+|+.++. .++++.+
T Consensus 237 --~e-~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~--~~~el~~ 309 (334)
T 3mwd_B 237 --EE-YKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR--SFDELGE 309 (334)
T ss_dssp --HH-HHHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBCCS--SGGGHHH
T ss_pred --HH-HHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeEcC--CHHHHHH
Confidence 44 677665 58899999999999641 444899999999999 999999999988754 4455543
No 13
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=1.6e-39 Score=376.42 Aligned_cols=232 Identities=18% Similarity=0.295 Sum_probs=194.2
Q ss_pred ccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCc
Q psy3769 361 FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCP 440 (974)
Q Consensus 361 i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~ 440 (974)
+.-++||+|+.++|+ ++|++||++|++.++++++||+++|+| +||+|+||+.+.+++++++|| ++|+|++||||
T Consensus 21 ~Pv~~~~~~~~~~p~--~~DlavI~vPa~~v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A~--~~g~rliGPNc- 94 (480)
T 3dmy_A 21 LTQVRRWDSACQKLP--DANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAR--EKGLLVMGPDC- 94 (480)
T ss_dssp CEEESSHHHHHHHST--TCCEEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHHH--HTTCCEECSSC-
T ss_pred CcccchHHHHHhcCC--CCCEEEEecCHHHHHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHHH--HcCCEEEecCc-
Confidence 444678888889987 899999999999999999999999999 899999999888899999999 99999999999
Q ss_pred cccccCccccccCCCCCCCCCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCC----CCCCCHHHHHHHhhhCCCc
Q psy3769 441 GLIVPEEIKIGIMPGNIHKKGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDP----INGLKYIDILKLFNEDQNT 516 (974)
Q Consensus 441 G~~~~~~~~~~~~~~~~~~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a----~~dv~~~d~l~~l~~Dp~t 516 (974)
|++|+ .++++++.+. .++|+||+|||||++++++++|+.++|+|||++||+||+. +.|+++.|+|+||.+||+|
T Consensus 95 G~~~~-~~~~~~f~~~-~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T 172 (480)
T 3dmy_A 95 GTSMI-AGTPLAFANV-MPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKS 172 (480)
T ss_dssp CEEEE-TTEEEESCCC-CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTC
T ss_pred ccccc-CCccccccCC-CCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCC
Confidence 88888 5666666543 5699999999999999999999999999999999999992 2499999999999999999
Q ss_pred cEEEEEEccCCCchHHHHHHHHh--cCCCCEEEEecccCCCCCCCccCcccccccchhceeeccccccceeeeeehhhhc
Q psy3769 517 DAVIMIGEIGGLDEIYAANWIKK--NMKKPVIGFIAGITAPPGKRMGHAGALITEIKKMTFLTASNGISIIQIILIDILL 594 (974)
Q Consensus 517 ~~I~ly~E~~g~~~~~~~~f~~~--~~~KPVv~lk~Grs~~~g~~~sHTgalag~~~~~~a~~~q~gi~~~~li~le~~L 594 (974)
++|++|+|+. .|...++|+++ +++||||++|+|||+ .| ++|+|+.++. .+++++
T Consensus 173 ~~I~ly~E~~--~e~~~~~f~~~ar~~~KPVV~~k~Grs~-~g-------------------~r~~Gvirv~--~~~el~ 228 (480)
T 3dmy_A 173 EVLAFVSKPP--AEAVRLKIVNAMKATGKPTVALFLGYTP-AV-------------------ARDENVWFAS--SLDEAA 228 (480)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHHHCSCEEEEETTCCC-SS-------------------SEETTEEEES--SHHHHH
T ss_pred CEEEEEEecC--CcHHHHHHHHHHHhCCCCEEEEEeCCCC-cc-------------------cccCCEEEEC--CHHHHH
Confidence 9999999985 22334899987 678999999999984 44 7889877654 455554
Q ss_pred ChhHHHHHHHHccc------CCccccceEEEehhHHHHHH
Q psy3769 595 GSTDAIIIALACRN------LQPNIRTKGIIFGTFGAIAI 628 (974)
Q Consensus 595 s~Dn~~vial~~~~------lp~~~r~~ai~~g~~ga~~~ 628 (974)
++-.+ +...+ .++++++.+++++++|.+++
T Consensus 229 ~~a~~----l~~~~~~~~~qp~~~G~rvaivtn~Gg~gvl 264 (480)
T 3dmy_A 229 RLACL----LSRVTARRNAIAPVSSGFICGLYTGGTLAAE 264 (480)
T ss_dssp HHHHH----HHHHHHHHHHHCCCSCCEEEEEESCHHHHHH
T ss_pred HHHHH----HhcCccccccCCCCCCCeEEEEECCHHHHHH
Confidence 33322 11111 24578999999999988775
No 14
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.7e-31 Score=286.34 Aligned_cols=205 Identities=18% Similarity=0.281 Sum_probs=181.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeee-cCcccccCeEEE-eCCHHHHHHHHHHHHh
Q psy3769 1 MNIYEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIH-AGGRGKCGGIKL-AQSLEQVEKYTKKILG 78 (974)
Q Consensus 1 m~L~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~-~ggrgk~GGV~l-~~s~ee~~~a~~~~l~ 78 (974)
++|+|+++|++|++||||+|++.++++.+|+.++++++| ||+|+||+.. .+|||++|||++ ++|++|++++++++++
T Consensus 18 ~~l~k~~~k~ll~~~GIp~p~~~~~~~~~ea~~~a~~lg-~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 18 TAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIG-YPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp CEECHHHHHHHHHTTTCCCCCCEEESSHHHHHHHHHHHC-SSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCcCCCCeEEeCCHHHHHHHHHHhC-CCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999 8999999876 678999999999 7999999999999987
Q ss_pred ccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHH
Q psy3769 79 MQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKN 158 (974)
Q Consensus 79 ~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~ 158 (974)
....+ ..+...++++||||+++++|++++++.|+.+ +|+++++ .||+++|.+++.+ +.++| ++.+
T Consensus 97 ~~~~~----~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~-g~v~~~~-~Gg~~iE~~~d~~------~~~~P---l~~~ 161 (238)
T 1wr2_A 97 NAKKY----RPDAEILGVLVAPMLKPGREVIIGVTEDPQF-GHAIMFG-LGGIFVEILKDVT------FRLVP---ITEK 161 (238)
T ss_dssp HHHHH----CTTCCCCEEEEEECCCCCEEEEEEEEEETTT-EEEEEEE-ECSTTHHHHCCCE------EEESS---CCHH
T ss_pred hhhhh----CCCCccceEEEEECCCCCeEEEEEEEeCCCC-CcEEEEe-cCCceeeeeccee------eecCC---CCHH
Confidence 64311 2345568999999999899999999999874 5778888 8999999987743 67788 9999
Q ss_pred HHHHHHHHC-------CCC---hhhHHHHHHHHHHHHhhcccCC--eeEEeeceeEEccCC-cEEEEEEEEeeeCc
Q psy3769 159 NIDNISKKI-------SIP---KNSLINFYEEIQNIYKSYWETD--SLLLEINPLVINSKN-KIISLDIKFNFDTN 221 (974)
Q Consensus 159 ~a~~~~~~l-------g~~---~~~~~~l~~~l~~L~~l~~~~d--~~~lEINPL~v~~~g-~~~alDaki~ldd~ 221 (974)
+++++.+.+ |.. +.+.+++.+++.+||+++.+.+ +.++|||||+++++| .++|+|||+++|||
T Consensus 162 ~~~~~~~~~~~~~~~~g~~G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~~~~~g~~~~alDa~~~~~~~ 237 (238)
T 1wr2_A 162 DARKMIQEIKAYPILAGARGEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVYNKGEGAVIVDSRIILKPK 237 (238)
T ss_dssp HHHHHHHTSTTHHHHHCC--CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEEECBTTSCEEECCEEEEECCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeEEeCCCCcEEEEEEEEEeCCC
Confidence 999999988 554 4799999999999999998876 999999999999986 69999999999998
No 15
>2f1l_A 16S rRNA processing protein; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS unknown function; HET: UNL; 2.46A {Pseudomonas aeruginosa} SCOP: b.41.1.4 b.43.3.4
Probab=99.97 E-value=2.8e-31 Score=271.70 Aligned_cols=132 Identities=23% Similarity=0.444 Sum_probs=118.4
Q ss_pred hhhhhhhhhcccccccceeEEEEeecCchhhhccCCEEEEEcCCCCceEEEEEEEEEEeCCEEEEEecCCCCHHHHHhhc
Q psy3769 840 VDHLITIGVVLRAYGIFGWILIKLFLDDKNIFFYARKIWFFDPNSLKLFSIKILNKKNHGNYVLANLYGITDRNLATKLQ 919 (974)
Q Consensus 840 v~~ll~ig~i~~~~Gl~Gevkv~~~td~~~~f~~~~~v~l~~~~~~~~~~~~v~~~r~~~~~~lvkf~gi~~re~Ae~L~ 919 (974)
.++++.+|+|.++||+||||||+++||+|++|..+..+|+..+ +.+++++|+++|.|++.+++||+||+|||+||+|+
T Consensus 17 ~~~~v~VG~I~~~hGikGeVkV~~~Td~pe~~~~~~~~~l~~~--~~~~~~~v~~~r~~~~~~ivkf~gi~dr~~Ae~L~ 94 (187)
T 2f1l_A 17 ADDLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRD--GEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFT 94 (187)
T ss_dssp --CEEEEEEEEEEETTTTEEEEEECSSSGGGGGGCCEEEEEET--TEEEEEEEEEEEEETTEEEEEETTCCSHHHHHTTT
T ss_pred CCCEEEEEEEeCCEeeCEEEEEEECCCCHHHhccCCEEEEecC--CcEEEEEEEEEEEECCEEEEEEeCCCCHHHHHHhC
Confidence 4678999999999999999999999999999999998888532 35789999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCCCCCceeeccccCeEEEecCCcEeEEEEEeecCCCcceEeC
Q psy3769 920 GYYLKISINDFPKLLSSDTFYWFNLIDCIVENIHGKLLGTVTEIIQNKLTGIKLL 974 (974)
Q Consensus 920 g~~l~v~~~~lp~ll~e~e~y~~DLiG~~V~d~~g~~lG~V~~v~~~ga~dv~~~ 974 (974)
|++||++++++|+| +||||||+|||||+|+|++|+.||+|++|+++||||+|++
T Consensus 95 G~~l~v~r~~lp~l-~edEfY~~DLIGl~V~~~~g~~lG~V~~v~~~ganDvlvV 148 (187)
T 2f1l_A 95 GYEICIPRSELPSL-EEGEYYWHQLEGLKVIDQGRQLLGVIDHLLETGANDVMVV 148 (187)
T ss_dssp TCEEEEEGGGSCC------CCHHHHTTCEEEETTSCEEEEEEEEECCSSSCEEEE
T ss_pred CCEEEEEHHHCCCC-CCCCEeHHHcCCeEEEeCCCCEEEEEEEEccCCCcEEEEE
Confidence 99999999999997 9999999999999999999999999999999999999974
No 16
>3h9n_A Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae}
Probab=99.97 E-value=5.2e-31 Score=268.29 Aligned_cols=129 Identities=26% Similarity=0.500 Sum_probs=121.8
Q ss_pred hhhhhhcccccccceeEEEEeecCchhhhccCCEEEEEcCCCCceEEEEEEEEEEeCCEEEEEecCCCCHHHHHhhcCCE
Q psy3769 843 LITIGVVLRAYGIFGWILIKLFLDDKNIFFYARKIWFFDPNSLKLFSIKILNKKNHGNYVLANLYGITDRNLATKLQGYY 922 (974)
Q Consensus 843 ll~ig~i~~~~Gl~Gevkv~~~td~~~~f~~~~~v~l~~~~~~~~~~~~v~~~r~~~~~~lvkf~gi~~re~Ae~L~g~~ 922 (974)
++.+|+|.++||+||||||+|+||+|++|...+++|+..+ +.+++++|+++|.|++.+++||+||+|||+|++|+|++
T Consensus 2 ~v~vG~I~~~hGikGevkv~~~Td~pe~~~~~~~~~l~~~--~~~~~~~v~~~r~~~~~~lvkf~gi~dr~~Ae~L~G~~ 79 (177)
T 3h9n_A 2 IEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIK--GEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVE 79 (177)
T ss_dssp EEEEEEEEEECSSSSCEEEEECSSSSGGGGGCCSEEEEET--TEEEEECEEEEEESSSCEEEEESSCCSHHHHHTTTTCE
T ss_pred EEEEEEEeCCCccCEEEEEEECCCCHHHhcCCCEEEEecC--CeEEEEEEEEEEEeCCEEEEEEcCCCCHHHHHHhcCCE
Confidence 5779999999999999999999999999988888888653 36789999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCceeeccccCeEEEecCCcEeEEEEEeecCCCcceEeC
Q psy3769 923 LKISINDFPKLLSSDTFYWFNLIDCIVENIHGKLLGTVTEIIQNKLTGIKLL 974 (974)
Q Consensus 923 l~v~~~~lp~ll~e~e~y~~DLiG~~V~d~~g~~lG~V~~v~~~ga~dv~~~ 974 (974)
||++++++|++ ++|||||+|||||+|+|++|+.||+|++|+++||||++++
T Consensus 80 l~v~~~~lp~l-~edE~Y~~dLiGl~V~~~~g~~lG~V~~v~~~gandvl~V 130 (177)
T 3h9n_A 80 IGVDLSVFPEL-EEGDYYWHDLIGCTVVNLEGYTMGTVTEMMETGSNDVLVV 130 (177)
T ss_dssp EEEECCCCCCC-SSSCGGGGGTTTCEEEETTCCEEEEEEEEEESSSCEEEEE
T ss_pred EEEEHHHCCCC-CCCCCCHHHhcCCEEEeCCCCEEEEEEEEeeCCCcEEEEE
Confidence 99999999997 9999999999999999999999999999999999999974
No 17
>2qgg_A 16S rRNA-processing protein RIMM; X-RAY, NESG, ASR73, structural genomics, PSI-2, protein structure initiative; 2.40A {Acinetobacter calcoaceticus}
Probab=99.97 E-value=4.9e-31 Score=269.66 Aligned_cols=131 Identities=22% Similarity=0.389 Sum_probs=123.3
Q ss_pred hhhhhhhhcccccccceeEEEEeecCchhhhccCCEEEEEcCCCCceEEEEEEEEEEeCCEEEEEecCCCCHHHHHhhcC
Q psy3769 841 DHLITIGVVLRAYGIFGWILIKLFLDDKNIFFYARKIWFFDPNSLKLFSIKILNKKNHGNYVLANLYGITDRNLATKLQG 920 (974)
Q Consensus 841 ~~ll~ig~i~~~~Gl~Gevkv~~~td~~~~f~~~~~v~l~~~~~~~~~~~~v~~~r~~~~~~lvkf~gi~~re~Ae~L~g 920 (974)
++++.+|+|.++||+||||||+++||+|++|..+..+|+..+ +.+++++|+++|.|++.+++||+||+|||+|++|+|
T Consensus 9 ~~~v~vG~I~~~hGikGevkv~~~td~pe~~~~~~~~~l~~~--~~~~~~~v~~~r~~~~~~ivkf~gi~dr~~Ae~L~G 86 (182)
T 2qgg_A 9 EDRIQIGQLRSAYGLNGWLWVYSNTEPMSNMFDYLPWYIETK--AGWQTVDVKRWKPHGKGLVVSLKGVSDRTGAESLVA 86 (182)
T ss_dssp SSEEEEEEEEEEETTTTEEEEEECSSSGGGGGGSSSEEEEET--TEEEEECEEEEEEETTEEEEEETTCCSHHHHHTTTT
T ss_pred CCEEEEEEEeCCcccCEEEEEEECCCCHHHhccCCEEEEecC--CcEEEEEEEEEEEcCCEEEEEECCCCCHHHHHHhCC
Confidence 468999999999999999999999999999999998888543 257899999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCCCCCceeeccccCeEEEec----CCcEeEEEEEeecCCCcceEeC
Q psy3769 921 YYLKISINDFPKLLSSDTFYWFNLIDCIVENI----HGKLLGTVTEIIQNKLTGIKLL 974 (974)
Q Consensus 921 ~~l~v~~~~lp~ll~e~e~y~~DLiG~~V~d~----~g~~lG~V~~v~~~ga~dv~~~ 974 (974)
++||++++++|+| ++|||||+|||||+|+|+ +|+.||+|++|+++||||+|++
T Consensus 87 ~~l~v~~~~lp~l-~ede~Y~~dLiGl~V~~~~~~~~g~~lG~V~~v~~~gandvl~V 143 (182)
T 2qgg_A 87 SNIWIAKSQLPKA-DVDEYYWSDLKGLTVLGLDDEEQEVNLGQIHELFETGANDVMVV 143 (182)
T ss_dssp CEEEEETTCCCCC-HHHHCCHHHHTTCEEEEECTTSCEEEEEEEEEEEECSSCEEEEE
T ss_pred CEEEEEHHHCCCC-CCCcEeHHHhCCcEEEEcccCCCCcEEEEEEEEccCCCcEEEEE
Confidence 9999999999997 999999999999999998 8999999999999999999975
No 18
>2dyi_A Probable 16S rRNA-processing protein RIMM; ribosomal protein S19, PRC-barrel, STRU genomics, NPPSFA; 2.00A {Thermus thermophilus} PDB: 3a1p_A 2dog_A
Probab=99.95 E-value=3.3e-28 Score=244.03 Aligned_cols=122 Identities=23% Similarity=0.417 Sum_probs=112.0
Q ss_pred hhhhhhhcccccccceeEEEEeecCchhhhccCCEEEEEcCCCCceEEEEEEEEEEeCCEEEEEecCCCCHHHHHhhcCC
Q psy3769 842 HLITIGVVLRAYGIFGWILIKLFLDDKNIFFYARKIWFFDPNSLKLFSIKILNKKNHGNYVLANLYGITDRNLATKLQGY 921 (974)
Q Consensus 842 ~ll~ig~i~~~~Gl~Gevkv~~~td~~~~f~~~~~v~l~~~~~~~~~~~~v~~~r~~~~~~lvkf~gi~~re~Ae~L~g~ 921 (974)
+++.+|+|.++||+|||||+ +||+ +|.....+|+.. + .++ +++++|.|++.+++||+||+|||+||+|+|+
T Consensus 2 ~~v~vG~I~~~hGikGevkv--~td~--~~~~~~~~~~~~-~--~~~--~v~~~r~~~~~~ivkf~gi~~r~~Ae~L~G~ 72 (162)
T 2dyi_A 2 RLVEIGRFGAPYALKGGLRF--RGEP--VVLHLERVYVEG-H--GWR--AIEDLYRVGEELVVHLAGVTDRTLAEALVGL 72 (162)
T ss_dssp CEEEEEEEEEECSSSSCEEE--EECG--GGGGCSEEEETT-T--EEE--EEEEEEEETTEEEEEETTCCSHHHHHTTTTC
T ss_pred CEEEEEEEeCCCccCeEEEE--EEch--HhcCCCEEEEeC-C--CEE--EEEEEEEECCEEEEEEcCCCCHHHHHHhCCC
Confidence 46889999999999999999 8888 888888777632 2 233 9999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCCCceeeccccCeEEEecCCcEeEEEEEeecCCCcceEeC
Q psy3769 922 YLKISINDFPKLLSSDTFYWFNLIDCIVENIHGKLLGTVTEIIQNKLTGIKLL 974 (974)
Q Consensus 922 ~l~v~~~~lp~ll~e~e~y~~DLiG~~V~d~~g~~lG~V~~v~~~ga~dv~~~ 974 (974)
+||++++++|++ +||||||+|||||+|+ ++|+.+|+|++|+++||||+|++
T Consensus 73 ~l~v~~~~lp~l-~e~e~y~~dLiGl~V~-~~g~~lG~V~~v~~~ga~dvl~V 123 (162)
T 2dyi_A 73 RVYAEVADLPPL-EEGRYYYFALIGLPVY-VEGRQVGEVVDILDAGAQDVLII 123 (162)
T ss_dssp EEEEEGGGSCCC-CTTCCCHHHHTTCEEE-ETTEEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEHHHCCCC-CCCcEeHHHhCCeEEE-ECCeEEEEEEEEccCCCceEEEE
Confidence 999999999997 9999999999999999 89999999999999999999974
No 19
>3r8n_P 30S ribosomal protein S16; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_P 1p87_P* 1vs7_P* 2avy_P 2aw7_P 1vs5_P 2i2u_P 2i2p_P* 2qan_P* 2qb9_P* 2qbb_P* 2qbd_P 2qbf_P 2qbh_P* 2qbj_P* 2qou_P* 2qow_P* 2qoy_P* 2qp0_P* 2vho_P ...
Probab=99.91 E-value=8.1e-26 Score=196.21 Aligned_cols=66 Identities=42% Similarity=0.653 Sum_probs=62.3
Q ss_pred eEEEEEEEecccCCCCCcceeeceeecCCCcCcccceEeeHHHHHHhHhcCcccCcchhhhhhhhh
Q psy3769 783 ELHISLPATDSRNSRDGRFIERIGFYNPLASKKEKKFKILLNRFTYWKQVGAKTSLTVDHLITIGV 848 (974)
Q Consensus 783 ~~~y~iv~~~~r~~rdg~~ie~~g~y~p~~~~~~~~~~~~~~~~~~wl~~ga~~s~tv~~ll~ig~ 848 (974)
.|||||||+|||++|||||||+||+|||++++.++.++||.||++|||++|||||+||.+||+.+.
T Consensus 14 ~PfYrIVvadsr~~RdGr~IE~lG~YnP~~~~~~~~v~l~~eri~~Wl~~GAqptdtV~~Ll~~a~ 79 (82)
T 3r8n_P 14 RPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVN 79 (82)
T ss_dssp SCCEEEEEEETTSCTTSCEEEEEEEECTTCCSSSCCCCCCHHHHHHHHHHTCEECHHHHHHHTTSC
T ss_pred CCEEEEEEeecCCCCCCCceeeeeEEcCCCCCCcceEEEcHHHHHHHHHCCCccCHHHHHHHHhhh
Confidence 489999999999999999999999999999987778999999999999999999999999998753
No 20
>3pys_P 30S ribosomal protein S16; ribosome, IGR, IRES, PSIV, CRPV; 3.40A {Thermus thermophilus} PDB: 1pnx_P 1voq_P 1vos_P 1vov_P 1vox_P 1voz_P 1pns_P 3ms0_P 3mr8_P 3pyq_P 3pyn_P 3pyu_P 3fic_P* 1emw_A 1fjg_P* 1hnw_P* 1hnx_P* 1hnz_P* 1hr0_P 1i94_P* ...
Probab=99.91 E-value=2.1e-25 Score=194.06 Aligned_cols=68 Identities=35% Similarity=0.671 Sum_probs=62.5
Q ss_pred eEEEEEEEecccCCCCCcceeeceeecCCCcCcccceEeeHHHHHHhHhcCcccCcchhhhhhhhhccc
Q psy3769 783 ELHISLPATDSRNSRDGRFIERIGFYNPLASKKEKKFKILLNRFTYWKQVGAKTSLTVDHLITIGVVLR 851 (974)
Q Consensus 783 ~~~y~iv~~~~r~~rdg~~ie~~g~y~p~~~~~~~~~~~~~~~~~~wl~~ga~~s~tv~~ll~ig~i~~ 851 (974)
.|||||||+|||++|||||||+||+|||+++. ++.++||.||++|||++|||||+||.+||+.+.+..
T Consensus 14 rPfYrIVvadsr~~RdGr~IE~lG~YnP~~~~-~~~i~l~~eri~~Wl~~GAqptdtV~~ll~~~g~~~ 81 (83)
T 3pys_P 14 NPHYRIVVTDARRKRDGKYIEKIGYYDPRKTT-PDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFR 81 (83)
T ss_dssp CCCCCCEEEESSSCTTCCCSEECCCBCSSCCS-TTCBCCCHHHHHHHHHTCCCBCSTTGGGTGGGCSSC
T ss_pred CCeEEEEEEecCCCCCCCceeeeeEEcCCCCC-CceEEEchHHHHHHHHCCCcCCHHHHHHHHHcCccc
Confidence 48999999999999999999999999999953 468999999999999999999999999999876654
No 21
>3bn0_A 30S ribosomal protein S16; ribonucleoprotein, ribosome; 2.00A {Aquifex aeolicus} SCOP: d.27.1.1
Probab=99.89 E-value=4.9e-24 Score=194.25 Aligned_cols=68 Identities=18% Similarity=0.374 Sum_probs=56.9
Q ss_pred eEEEEEEEecccCCCCCcceeeceeecCCCcCcccceEeeHHHHHHhHhcCcccCcchhhhhhhhhccccc
Q psy3769 783 ELHISLPATDSRNSRDGRFIERIGFYNPLASKKEKKFKILLNRFTYWKQVGAKTSLTVDHLITIGVVLRAY 853 (974)
Q Consensus 783 ~~~y~iv~~~~r~~rdg~~ie~~g~y~p~~~~~~~~~~~~~~~~~~wl~~ga~~s~tv~~ll~ig~i~~~~ 853 (974)
.|||||||+|||++|||||||+||+|||+ +| +.+.||.||++|||++|||||+||.+||+.+.+...+
T Consensus 15 rPfYrIVVaDsR~~RDGr~IE~lG~YnP~-~~--~~v~ld~eri~~WL~~GAQPTdtV~~LL~~ag~~~~~ 82 (112)
T 3bn0_A 15 HPIYRIVVMDAKSPREGKYIDILGTYDPK-RK--VLINVYPEKVKEWVLKGVELSHRAKAILWNHGILKEV 82 (112)
T ss_dssp EEEEEEEEEECC------CSEEEEEEETT-TT--EEEEECHHHHHHHHHTTCEEEHHHHHHHHHTTHHHHH
T ss_pred CCeEEEEEEecCCCCCCCCEeEeeeccCC-Cc--ceEEEcHHHHHHHHHcCCccCHHHHHHHHHcCCcccc
Confidence 59999999999999999999999999999 53 5899999999999999999999999999997776655
No 22
>3bbn_P Ribosomal protein S16; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=99.88 E-value=8.9e-25 Score=191.92 Aligned_cols=68 Identities=24% Similarity=0.448 Sum_probs=62.5
Q ss_pred eEEEEEEEecccCCCCCcceeeceeecCCCcCcccceEeeHHHHHHhHhcCcccCcchhhhhhhhhcccccc
Q psy3769 783 ELHISLPATDSRNSRDGRFIERIGFYNPLASKKEKKFKILLNRFTYWKQVGAKTSLTVDHLITIGVVLRAYG 854 (974)
Q Consensus 783 ~~~y~iv~~~~r~~rdg~~ie~~g~y~p~~~~~~~~~~~~~~~~~~wl~~ga~~s~tv~~ll~ig~i~~~~G 854 (974)
.|||||||+|||++|||||||+||+|||+++ .+.||.||++|||++|||||+||.+||+.+.+...|.
T Consensus 14 rPfYrIVvadsr~~RDGr~IE~lG~YnP~~~----~~~l~~eri~~Wl~~GAqpTdtV~~ll~~~g~~~~~~ 81 (88)
T 3bbn_P 14 RAVYRIVAIDVRSRREGRDLQKVGFYDPIKS----QTYLNVPAILDFLEKGAQPTETVYDILKRAEVFKEFR 81 (88)
T ss_dssp CCCCCCCCEETTSCSSSCCSSCCCCBCTTSS----CBCCCTTTSSSSTTSSCEECTTTSSSSTTTTSSSCC-
T ss_pred CCeEEEEEEecCCCCCCCcEeEEEeccCCCC----ceEEcHHHHHHHHHcCCccCHHHHHHHHHcCCccccc
Confidence 4899999999999999999999999999987 4899999999999999999999999999977776654
No 23
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.84 E-value=1.3e-21 Score=186.95 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=100.8
Q ss_pred hcCCeEEEEEcccc---ccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecc
Q psy3769 312 QQNNLKTILVNIFG---ITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPA 388 (974)
Q Consensus 312 ~~~~~~~i~vni~G---~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~ 388 (974)
++|+..+| +| .++|.|+.++++|+++||+ ||||||++ ++++|++||+|++|+|+ +|+|++++|+
T Consensus 2 ~~p~siAV----VGaS~~~~~~g~~v~~~L~~~g~~----V~pVnP~~--~~i~G~~~y~sl~dlp~---vDlavi~~p~ 68 (122)
T 3ff4_A 2 NAMKKTLI----LGATPETNRYAYLAAERLKSHGHE----FIPVGRKK--GEVLGKTIINERPVIEG---VDTVTLYINP 68 (122)
T ss_dssp CCCCCEEE----ETCCSCTTSHHHHHHHHHHHHTCC----EEEESSSC--SEETTEECBCSCCCCTT---CCEEEECSCH
T ss_pred CCCCEEEE----EccCCCCCCHHHHHHHHHHHCCCe----EEEECCCC--CcCCCeeccCChHHCCC---CCEEEEEeCH
Confidence 35666666 57 5577999999999999996 99999998 99999999999999974 9999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccc
Q psy3769 389 IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIV 444 (974)
Q Consensus 389 ~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~ 444 (974)
+.++++++||+++|+|. +|+++|+.+ +++.++|| ++|||++| ||+|++-
T Consensus 69 ~~v~~~v~e~~~~g~k~-v~~~~G~~~---~e~~~~a~--~~Girvv~-nC~gv~l 117 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKR-VIFNPGTEN---EELEEILS--ENGIEPVI-GCTLVML 117 (122)
T ss_dssp HHHGGGHHHHHHHCCSE-EEECTTCCC---HHHHHHHH--HTTCEEEE-SCHHHHH
T ss_pred HHHHHHHHHHHhcCCCE-EEECCCCCh---HHHHHHHH--HcCCeEEC-CcCeEEe
Confidence 99999999999999996 899999964 45679999 99999997 9999874
No 24
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.81 E-value=7.9e-21 Score=186.63 Aligned_cols=126 Identities=13% Similarity=0.197 Sum_probs=108.4
Q ss_pred HHHHHhhcCCeEEEEEcccc---ccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEE
Q psy3769 306 AFKIMMQQNNLKTILVNIFG---ITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVS 382 (974)
Q Consensus 306 a~~~il~~~~~~~i~vni~G---~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDla 382 (974)
.++.++++|+..+| +| .+++.|+.++++++++||+ ||||||+..++++.|++||+|++|+|+ ++|++
T Consensus 5 ~l~~ll~~p~~vaV----vGas~~~g~~G~~~~~~l~~~G~~----v~~vnp~~~~~~i~G~~~~~sl~el~~--~vDla 74 (140)
T 1iuk_A 5 ELRAYLSQAKTIAV----LGAHKDPSRPAHYVPRYLREQGYR----VLPVNPRFQGEELFGEEAVASLLDLKE--PVDIL 74 (140)
T ss_dssp HHHHHHHHCCEEEE----ETCCSSTTSHHHHHHHHHHHTTCE----EEEECGGGTTSEETTEECBSSGGGCCS--CCSEE
T ss_pred HHHHHHcCCCEEEE----ECCCCCCCChHHHHHHHHHHCCCE----EEEeCCCcccCcCCCEEecCCHHHCCC--CCCEE
Confidence 35566656776665 57 4477899999999999995 999999943489999999999999987 89999
Q ss_pred EEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCc
Q psy3769 383 VIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEE 447 (974)
Q Consensus 383 vi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~ 447 (974)
++++|++.+++++++|+++|+|. +|+++|+.+ +++.++|+ ++|+|++||||+|+++|+.
T Consensus 75 vi~vp~~~~~~v~~~~~~~gi~~-i~~~~g~~~---~~~~~~a~--~~Gir~vgpnc~g~~~~~~ 133 (140)
T 1iuk_A 75 DVFRPPSALMDHLPEVLALRPGL-VWLQSGIRH---PEFEKALK--EAGIPVVADRCLMVEHKRL 133 (140)
T ss_dssp EECSCHHHHTTTHHHHHHHCCSC-EEECTTCCC---HHHHHHHH--HTTCCEEESCCHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHHHcCCCE-EEEcCCcCH---HHHHHHHH--HcCCEEEcCCccceEChhh
Confidence 99999999999999999999997 577888763 56778999 9999999999999999864
No 25
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.80 E-value=7.5e-20 Score=180.75 Aligned_cols=127 Identities=13% Similarity=0.101 Sum_probs=107.9
Q ss_pred HHHHhhcCCeEEEEEcccc---ccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEE
Q psy3769 307 FKIMMQQNNLKTILVNIFG---ITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSV 383 (974)
Q Consensus 307 ~~~il~~~~~~~i~vni~G---~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlav 383 (974)
++.++.+|+..++ +| .+++.|+.++++|++.||+ ||||||+..|+++.|.+||+|++|+|+ ++|+++
T Consensus 6 l~~ll~~p~~Iav----IGas~~~g~~G~~~~~~L~~~G~~----v~~vnp~~~g~~i~G~~~~~sl~el~~--~~Dlvi 75 (145)
T 2duw_A 6 IAGILTSTRTIAL----VGASDKPDRPSYRVMKYLLDQGYH----VIPVSPKVAGKTLLGQQGYATLADVPE--KVDMVD 75 (145)
T ss_dssp HHHHHHHCCCEEE----ESCCSCTTSHHHHHHHHHHHHTCC----EEEECSSSTTSEETTEECCSSTTTCSS--CCSEEE
T ss_pred HHHHHhCCCEEEE----ECcCCCCCChHHHHHHHHHHCCCE----EEEeCCcccccccCCeeccCCHHHcCC--CCCEEE
Confidence 4556665766555 57 4478899999999999997 999999986689999999999999987 899999
Q ss_pred EEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCccc
Q psy3769 384 IYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEEIK 449 (974)
Q Consensus 384 i~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~~~ 449 (974)
+++|++.+++++++|+++|++.+|+.++.+ ++++.++|+ ++|++++||||+|+++|..+.
T Consensus 76 i~vp~~~v~~v~~~~~~~g~~~i~i~~~~~----~~~l~~~a~--~~Gi~~igpnc~g~~~~~~~~ 135 (145)
T 2duw_A 76 VFRNSEAAWGVAQEAIAIGAKTLWLQLGVI----NEQAAVLAR--EAGLSVVMDRCPAIELPRLGL 135 (145)
T ss_dssp CCSCSTHHHHHHHHHHHHTCCEEECCTTCC----CHHHHHHHH--TTTCEEECSCCHHHHSTTTTC
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCChH----HHHHHHHHH--HcCCEEEcCCeeeEEcccccc
Confidence 999999999999999999999855544333 466789999 999999999999999997543
No 26
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.79 E-value=1e-19 Score=179.69 Aligned_cols=123 Identities=12% Similarity=0.152 Sum_probs=107.2
Q ss_pred HHHHHhhcCCeEEEEEccccc---cCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEE
Q psy3769 306 AFKIMMQQNNLKTILVNIFGI---TGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVS 382 (974)
Q Consensus 306 a~~~il~~~~~~~i~vni~G~---~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDla 382 (974)
.++.++++|+..+| +|. +++.|+.++++|++.||+ ||||||+. +++.|++||+|++|+|+ ++|++
T Consensus 14 ~l~~ll~~p~~iaV----VGas~~~g~~G~~~~~~l~~~G~~----v~~Vnp~~--~~i~G~~~y~sl~~l~~--~vDlv 81 (144)
T 2d59_A 14 DIREILTRYKKIAL----VGASPKPERDANIVMKYLLEHGYD----VYPVNPKY--EEVLGRKCYPSVLDIPD--KIEVV 81 (144)
T ss_dssp HHHHHHHHCCEEEE----ETCCSCTTSHHHHHHHHHHHTTCE----EEEECTTC--SEETTEECBSSGGGCSS--CCSEE
T ss_pred HHHHHHcCCCEEEE----EccCCCCCchHHHHHHHHHHCCCE----EEEECCCC--CeECCeeccCCHHHcCC--CCCEE
Confidence 45667766776665 574 467899999999999995 99999997 89999999999999987 89999
Q ss_pred EEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccC
Q psy3769 383 VIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPE 446 (974)
Q Consensus 383 vi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~ 446 (974)
++++|++.+++++++|+++|++. +|+++|+. ++++.++|+ ++|+|++||||+|++++.
T Consensus 82 vi~vp~~~~~~vv~~~~~~gi~~-i~~~~g~~---~~~l~~~a~--~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 82 DLFVKPKLTMEYVEQAIKKGAKV-VWFQYNTY---NREASKKAD--EAGLIIVANRCMMREHER 139 (144)
T ss_dssp EECSCHHHHHHHHHHHHHHTCSE-EEECTTCC---CHHHHHHHH--HTTCEEEESCCHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHHHcCCCE-EEECCCch---HHHHHHHHH--HcCCEEEcCCchhhcchh
Confidence 99999999999999999999996 57888875 356779999 999999999999999874
No 27
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.77 E-value=3.9e-19 Score=174.04 Aligned_cols=108 Identities=17% Similarity=0.162 Sum_probs=95.3
Q ss_pred ccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcE
Q psy3769 326 ITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELEL 405 (974)
Q Consensus 326 ~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~ 405 (974)
.++++|+.++++|++.||+ ||||||+. +++.|.+||+|++|+|+ ++|++++++|++.+++++++|+++|++.
T Consensus 25 ~~g~~G~~~~~~L~~~G~~----V~~vnp~~--~~i~G~~~~~s~~el~~--~vDlvii~vp~~~v~~v~~~~~~~g~~~ 96 (138)
T 1y81_A 25 NPAKYGNIILKDLLSKGFE----VLPVNPNY--DEIEGLKCYRSVRELPK--DVDVIVFVVPPKVGLQVAKEAVEAGFKK 96 (138)
T ss_dssp CTTSHHHHHHHHHHHTTCE----EEEECTTC--SEETTEECBSSGGGSCT--TCCEEEECSCHHHHHHHHHHHHHTTCCE
T ss_pred CCCCHHHHHHHHHHHCCCE----EEEeCCCC--CeECCeeecCCHHHhCC--CCCEEEEEeCHHHHHHHHHHHHHcCCCE
Confidence 4577899999999999995 99999997 89999999999999987 8999999999999999999999999998
Q ss_pred EEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccccCc
Q psy3769 406 VICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVPEE 447 (974)
Q Consensus 406 ~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~~~ 447 (974)
+|+.++++ .+++.++|+ ++|++++||||+|++++..
T Consensus 97 i~~~~~~~----~~~l~~~a~--~~Gi~~igpnc~g~~~~~~ 132 (138)
T 1y81_A 97 LWFQPGAE----SEEIRRFLE--KAGVEYSFGRCIMVETSNK 132 (138)
T ss_dssp EEECTTSC----CHHHHHHHH--HHTCEEECSCCHHHHC---
T ss_pred EEEcCccH----HHHHHHHHH--HCCCEEEcCCcceEEccCc
Confidence 76666554 356788899 9999999999999999863
No 28
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=99.24 E-value=7.2e-11 Score=134.95 Aligned_cols=166 Identities=11% Similarity=0.114 Sum_probs=120.6
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHH----HHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVD----EAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGM 79 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~e----ea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~ 79 (974)
+.+.+|++|+++|||+|++.++++.+ ++.++++++| +|+||||....+++ ||.+++|++|+.+++++++..
T Consensus 159 DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~~~lg-~PvvVKP~~ggss~----Gv~~v~~~~el~~a~~~a~~~ 233 (386)
T 3e5n_A 159 DKDMAKRVLRDARLAVAPFVCFDRHTAAHADVDTLIAQLG-LPLFVKPANQGSSV----GVSQVRTADAFAAALALALAY 233 (386)
T ss_dssp BHHHHHHHHHHTTCCBCCEEEEEHHHHTTCCHHHHHHHHC-SSEEEEESBSCSST----TCEEECSGGGHHHHHHHHTTT
T ss_pred CHHHHHHHHHHCCCCCCCEEEEeCcccchhhHHHHHHhcC-CCEEEEECCCCcCC----CEEEECCHHHHHHHHHHHHhC
Confidence 35678999999999999999999888 7888888999 89999996544333 889999999999998887532
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHH
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNN 159 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~ 159 (974)
. ..++|||+++ ++|+.+++..|+. .+++..+ | +.|..++.+++
T Consensus 234 ~-------------~~vlVEe~I~-G~E~~v~vl~~~~--~~~~~~g-------e--------------i~~~~~~~d~~ 276 (386)
T 3e5n_A 234 D-------------HKVLVEAAVA-GREIECAVLGNAV--PHASVCG-------E--------------VVVHDAFYSYA 276 (386)
T ss_dssp C-------------SEEEEEECCC-SEEEEEEEECSSS--CEEEEEE-------E--------------ECC--------
T ss_pred C-------------CcEEEEcCCC-CeEEEEEEEeCCC--ceEEEeE-------E--------------EEeCCcccchh
Confidence 1 4789999999 6999999998864 2322221 1 11111122222
Q ss_pred HHHHH-------HHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 160 IDNIS-------KKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 160 a~~~~-------~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
+.... .+..++++..+++.+++.++++.+...++.-+| ++++++|++++++.
T Consensus 277 ~ky~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vD---f~~~~dg~~~vlEi 335 (386)
T 3e5n_A 277 TKYISEHGAEIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVD---VFLCADGRIVINEV 335 (386)
T ss_dssp ---------CEESSCSSCHHHHHHHHHHHHHHHHHHTCCSEEEEE---EEECTTCCEEEEEE
T ss_pred cccCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHhCCccEEEEE---EEEECCCcEEEEEe
Confidence 22111 123567778889999999999998888888999 68888888877764
No 29
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=99.18 E-value=2.2e-10 Score=127.24 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=116.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHH----HHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAA----KKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGM 79 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a----~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~ 79 (974)
+.+.+|++|+++|||+|++.++++.+++.+++ +++| +|+||||....+++ ||.+++|++|+.++++++...
T Consensus 107 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~~g-~PvvvKP~~~~~s~----Gv~~v~~~~el~~a~~~~~~~ 181 (317)
T 4eg0_A 107 DKFRTKLVWQQTGVPTPPFETVMRGDDYAARATDIVAKLG-LPLFVKPASEGSSV----AVLKVKTADALPAALSEAATH 181 (317)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEEETTSCHHHHHHHHHHHHC-SCEEEEECC---------CCEEECSGGGHHHHHHHHTTT
T ss_pred CHHHHHHHHHHCCcCCCCEEEEECchhHHHHHHHHHHhcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHhC
Confidence 46788999999999999999999888877777 7899 89999996544444 888999999999998875422
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHH
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNN 159 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~ 159 (974)
...++||||++.++|+.+++..|+. .+++-+.. .++. .+.-.+..+.. ...+.|
T Consensus 182 -------------~~~~lvEe~i~~G~E~~v~vl~~~~-~~~~~i~~-~~~~-~~~~~k~~~g~--~~~~~P-------- 235 (317)
T 4eg0_A 182 -------------DKIVIVEKSIEGGGEYTACIAGDLD-LPLIKIVP-AGEF-YDYHAKYVAND--TQYLIP-------- 235 (317)
T ss_dssp -------------CSEEEEEECCCSSEEEEEEEETTCC-CCCEEEEC-------------------CEEESS--------
T ss_pred -------------CCeEEEEcCCCCCcEEEEEEECCcc-cceEEEee-CCce-echhhcccCCC--eeEEcC--------
Confidence 2479999999978999999998853 32322222 1111 00000000000 011122
Q ss_pred HHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 160 IDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 160 a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
..++++..+++.+++.++++.+...+..-+| ++++++|++++++.
T Consensus 236 -------~~l~~~~~~~l~~~a~~~~~~lg~~G~~~vD---~~~~~~g~~~vlEi 280 (317)
T 4eg0_A 236 -------CGLPAEQETELKRIARRAFDVLGCTDWGRAD---FMLDAAGNAYFLEV 280 (317)
T ss_dssp -------CSSCHHHHHHHHHHHHHHHHTTTCCSEEEEE---EEECTTCCEEEEEE
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHhCCCceEEEE---EEEeCCCCEEEEEe
Confidence 2356667788899999999988777888889 68888888887764
No 30
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=99.16 E-value=2.5e-10 Score=129.50 Aligned_cols=170 Identities=11% Similarity=0.112 Sum_probs=119.0
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHH----HHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVD----EAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGM 79 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~e----ea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~ 79 (974)
+.+.+|++|+++|||+|++..+++.+ ++.++++++| +|+||||.... . +-||.+++|++|+.+++++++..
T Consensus 140 DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~lg-~PvvVKP~~gg--s--s~Gv~~v~~~~el~~a~~~a~~~ 214 (364)
T 3i12_A 140 DKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLG-LPLFVKPANQG--S--SVGVSKVANEAQYQQAVALAFEF 214 (364)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEEETTTGGGCCHHHHHHHHC-SSEEEEETTCC--T--TTTCEEESSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCEEEEEccccchhhHHHHHHhcC-CCEEEEECCCC--C--CcCeEEeCCHHHHHHHHHHHHhc
Confidence 46789999999999999999999887 7888888999 99999996322 2 23899999999999998887643
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeecc---CCCCcceeeccccCCcceEEEEeCCCCCCC
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGS---NKGGMDIEIISKNSPELLYKTIIDPLIGLT 156 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s---~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~ 156 (974)
. ..++|||+++ ++|+.+++..|+. ..++..+ ..++.. ....+..+.-....+.|
T Consensus 215 ~-------------~~vlVEe~I~-G~E~~v~vl~~~~--~~~~~~~ei~~~~~~~--~~~~ky~~~~~~~~~~P----- 271 (364)
T 3i12_A 215 D-------------HKVVVEQGIK-GREIECAVLGNDN--PQASTCGEIVLNSEFY--AYDTKYIDDNGAQVVVP----- 271 (364)
T ss_dssp C-------------SEEEEEECCC-SEEEEEEEEESSS--CEEEEEEEEECCTTCC----TTTTSGGGGCEEESS-----
T ss_pred C-------------CcEEEEcCcC-CeEEEEEEEeCCC--ceEeeeEEEecCCCcc--CHHHcccCCCceEEEeC-----
Confidence 2 4789999999 5999999998864 1111111 001100 00000000000011122
Q ss_pred HHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 157 KNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 157 ~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
..++++..+++.+++.++++.+...++.-+| ++++++|+++.++.
T Consensus 272 ----------a~l~~~~~~~i~~~a~~~~~alg~~G~~~vD---~~~~~~g~~~vlEi 316 (364)
T 3i12_A 272 ----------AQIPSEVNDKIRAIAIQAYQTLGCAGMARVD---VFLTADNEVVINEI 316 (364)
T ss_dssp ----------CSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEE
T ss_pred ----------CCCCHHHHHHHHHHHHHHHHHhCCceEEEEE---EEEecCCCEEEEEe
Confidence 2456677788899999999998777888899 78888888877664
No 31
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=99.11 E-value=4.9e-11 Score=139.05 Aligned_cols=191 Identities=15% Similarity=0.182 Sum_probs=123.8
Q ss_pred EEEEEEEeccCCceeeeccCCCCcceeeccccCCc--ce-EEEEeCCCCCCCHHHHHHHHHHC-----------CCChhh
Q psy3769 108 LYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPE--LL-YKTIIDPLIGLTKNNIDNISKKI-----------SIPKNS 173 (974)
Q Consensus 108 ~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~--~i-~~~~i~p~~gl~~~~a~~~~~~l-----------g~~~~~ 173 (974)
+.+++.-.... +++-++|..|++-.|.+...+.. .+ +-+.+--..+++..+..+++..= ++. +
T Consensus 139 ~~~~~~~~~~~-G~v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~d~l~~~~~D~~t~~I~l~~E~i~--~ 215 (457)
T 2csu_A 139 LNATFITVAKK-GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMADVDFAELMEYLADTEEDKAIALYIEGVR--N 215 (457)
T ss_dssp EEEESSCCCEE-CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCCSSCHHHHHHHHTTCSSCCEEEEEESCCS--C
T ss_pred ceeeecCCCCC-CCEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcCCCCHHHHHHHHhcCCCCCEEEEEEecCC--C
Confidence 44554333223 56778887888877764321111 11 11334434456666655555432 222 3
Q ss_pred HHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE--------EeeeC---ccccCCccccccccchhhhccc
Q psy3769 174 LINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK--------FNFDT---NALFRHPEIISYQYAHKKYINK 242 (974)
Q Consensus 174 ~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak--------i~ldd---~a~~r~~~~~~~~~~~~~~~~~ 242 (974)
-.++.+.+.++. ..+ |+++..-|+- +.-++ +.=+| +|.|||+.+...+
T Consensus 216 ~~~f~~~a~~~~---~~K--------PVv~~k~G~~-~~g~~aa~~Htgalag~~~~~~AafRqaGv~~v~--------- 274 (457)
T 2csu_A 216 GKKFMEVAKRVT---KKK--------PIIALKAGKS-ESGARAASSHTGSLAGSWKIYEAAFKQSGVLVAN--------- 274 (457)
T ss_dssp HHHHHHHHHHHH---HHS--------CEEEEECC-------------------CHHHHHHHHHHTTCEEES---------
T ss_pred HHHHHHHHHHhc---CCC--------CEEEEEcCCC-ccccchhhcccCccCCcHHHHHHHHHhCCCeEEC---------
Confidence 445666665552 233 4444344421 11111 11112 4678998876544
Q ss_pred CChhhhhhccCCCeEeec--CCeEEEEecCcchhhHHHHHHHhcCCC---------------------CceeeecCCCCC
Q psy3769 243 IDLMEIEASKFDLTYIPL--NGNIGCLVNGAGLAMATMDTIKLFGGE---------------------PANFLDIGGGAT 299 (974)
Q Consensus 243 ~~~~e~~a~~~~l~yv~l--~G~Ig~~~nGaGlam~t~D~i~~~gg~---------------------panfld~GG~a~ 299 (974)
++.|..+....|+| .+ +++|+||+||+|++|.++|++..+|++ ++||+|+||.++
T Consensus 275 -~~~El~~~~~~l~~-~~~~g~rvaiitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~ 352 (457)
T 2csu_A 275 -TIDEMLSMARAFSQ-PLPRGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASAR 352 (457)
T ss_dssp -SHHHHHHHHTTTTS-CCCSSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCC
T ss_pred -CHHHHHHHHHHhcC-CCCCCCcEEEEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCC
Confidence 45566666778888 77 799999999999999999999999998 899999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEEccc
Q psy3769 300 IKTITEAFKIMMQQNNLKTILVNIF 324 (974)
Q Consensus 300 ~~~v~~a~~~il~~~~~~~i~vni~ 324 (974)
++.+.++++.+++||++++||+|+.
T Consensus 353 ~~~~~~al~~~l~dp~vd~vlv~~~ 377 (457)
T 2csu_A 353 GEDYYRTAKLLLQDPNVDMLIAICV 377 (457)
T ss_dssp HHHHHHHHHHHHHSTTCSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEcc
Confidence 9999999999999999999999983
No 32
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.06 E-value=2.4e-09 Score=121.68 Aligned_cols=166 Identities=13% Similarity=0.139 Sum_probs=112.4
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHH----HHHHHHHcCCCc-EEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHh
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDE----AIKAAKKIGGNS-WVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILG 78 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~ee----a~~~a~~ig~~P-vVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~ 78 (974)
+-+.+|++|+++|||+|++.++++.++ ..++++++| || +||||....+++ ||.+++|++|+.+++++.+.
T Consensus 140 DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~~~lg-~P~vvVKP~~ggss~----Gv~~v~~~~eL~~a~~~a~~ 214 (372)
T 3tqt_A 140 EKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYQRLLDRWG-TSELFVKAVSLGSSV----ATLPVKTETEFTKAVKEVFR 214 (372)
T ss_dssp SHHHHHHHHHHTTCCBCCCEEECTTSCCTTHHHHHHHHC----CEEEEESSCCSGG----GEEEECSHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCcCCCCEEEEechhhhhhHHHHHHHhcC-CCeEEEEECCCCCCC----CEEEECCHHHHHHHHHHHHh
Confidence 356789999999999999999988764 456777899 99 999995433323 89999999999998887643
Q ss_pred ccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHH
Q psy3769 79 MQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKN 158 (974)
Q Consensus 79 ~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~ 158 (974)
.. ..++|||+++ ++|+.+++..|+. +. ++..| |... ..++.++
T Consensus 215 ~~-------------~~vlVEe~I~-G~E~~v~vl~~~~---~~--~~~~~----ei~~--------------~~~~~d~ 257 (372)
T 3tqt_A 215 YD-------------DRLMVEPRIR-GREIECAVLGNGA---PK--ASLPG----EIIP--------------HHDYYSY 257 (372)
T ss_dssp TC-------------SCEEEEECCC-SEEEEEEEEESSS---CE--ECCCE----EEEC--------------C------
T ss_pred cC-------------CCEEEECCCC-CEEEEEEEEeCCC---ce--EeeeE----EEec--------------CCCccch
Confidence 21 3689999999 8999999998862 21 11011 1111 0111222
Q ss_pred HHHHHH-------HHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 159 NIDNIS-------KKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 159 ~a~~~~-------~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
++.... .+..++++..+++.++..++++.+...++.-+| ++++++|+++.++.
T Consensus 258 ~~ky~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~rvD---f~~~~dg~~~vlEI 317 (372)
T 3tqt_A 258 DAKYLDPNGATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVD---FFVTPNNKVLVNEI 317 (372)
T ss_dssp ---------CEEESCCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEE
T ss_pred hhcccCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEE---EEEeCCCcEEEEEE
Confidence 221111 112466777889999999999998877888889 78888888877664
No 33
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=99.06 E-value=2.4e-09 Score=124.46 Aligned_cols=101 Identities=22% Similarity=0.247 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++....
T Consensus 123 dK~~~k~~l~~~GIp~p~~~~~~~~~ea~~~~~~~g-~PvVvKp~~~~gg~----GV~iv~~~eel~~a~~~~~~~~~-- 195 (442)
T 3lp8_A 123 SKGFTKELCMRYGIPTAKYGYFVDTNSAYKFIDKHK-LPLVVKADGLAQGK----GTVICHTHEEAYNAVDAMLVHHK-- 195 (442)
T ss_dssp CHHHHHHHHHHHTCCBCCEEEESSHHHHHHHHHHSC-SSEEEEESSCCTTT----SEEEESSHHHHHHHHHHHHTSCT--
T ss_pred CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHcC-CcEEEeECCCCCCC----eEEEeCCHHHHHHHHHHHHhhcc--
Confidence 356789999999999999999999999999999999 99999997666666 89999999999999999875321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV 117 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~ 117 (974)
.+..-..++||||++ +.|+.+.+..|..
T Consensus 196 -----~g~~~~~vlvEe~i~-G~E~sv~~~~dg~ 223 (442)
T 3lp8_A 196 -----FGEAGCAIIIEEFLE-GKEISFFTLVDGS 223 (442)
T ss_dssp -----TGGGGSSEEEEECCC-SEEEEEEEEEESS
T ss_pred -----cCCCCCeEEEEEeec-CcEEEEEEEECCC
Confidence 222234689999999 8999999998864
No 34
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=99.06 E-value=3.5e-09 Score=120.77 Aligned_cols=166 Identities=10% Similarity=0.098 Sum_probs=114.1
Q ss_pred CHHHHHHHHHHcC-CCCCCceeeCCH----HHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHh
Q psy3769 4 YEYQGKEILRKFN-VTIPKGILCMNV----DEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILG 78 (974)
Q Consensus 4 ~E~~ak~lL~~~G-Ipvp~~~~~~s~----eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~ 78 (974)
+.+.+|++|+++| ||+|++.++++. +++.++++++| +|+||||....+++ ||.+++|++|+.+++++.+.
T Consensus 161 DK~~~k~~l~~~G~Ipvp~~~~~~~~~~~~~~~~~~~~~lg-~PvvVKP~~ggss~----GV~~v~~~~el~~al~~a~~ 235 (383)
T 3k3p_A 161 DKITTNQVLESATTIPQVAYVALIEGEPLESKLAEVEEKLI-YPVFVKPANMGSSV----GISKAENRTDLKQAIALALK 235 (383)
T ss_dssp CHHHHHHHHHHHCCCCBCCEEEEETTSCHHHHHHHHHHHCC-SSEEEEECC----------CEEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCcCCCCEEEEeCccchhHHHHHHHHhcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHh
Confidence 4577899999999 999999998876 56778888999 99999995433222 89999999999999888754
Q ss_pred ccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHH
Q psy3769 79 MQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKN 158 (974)
Q Consensus 79 ~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~ 158 (974)
.. ..++|||+++ ++|+.+++..|.. .. ++.. .|...+ .++.++
T Consensus 236 ~~-------------~~vlVEe~I~-G~E~~v~vl~d~~--~~-~~~~------~ei~~~--------------~~~~d~ 278 (383)
T 3k3p_A 236 YD-------------SRVLIEQGVD-AREIEVGILGNTD--VK-TTLP------GEIVKD--------------VAFYDY 278 (383)
T ss_dssp HC-------------SEEEEEECCC-SEEEEEEEEESSS--CE-ECCC------EEEC----------------------
T ss_pred CC-------------CeEEEEcCCC-CeEEEEEEEeCCC--ee-EEee------EEEecC--------------CCccch
Confidence 21 3789999999 8999999998742 12 1111 122111 112122
Q ss_pred HHHH------HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 159 NIDN------ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 159 ~a~~------~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
++.. ...+..++++..+++.+++.++++.+...++.-+| ++++++|+++.++.
T Consensus 279 ~~ky~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vD---f~~~~~g~~~vlEI 337 (383)
T 3k3p_A 279 EAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCD---FFLTEDGKVYLNEL 337 (383)
T ss_dssp ---------CEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEE
T ss_pred hhcccCCCeeEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEEE---EEEECCCCEEEEEe
Confidence 2111 11122466777888999999999988777788888 78888888877664
No 35
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=99.04 E-value=2.3e-09 Score=123.20 Aligned_cols=167 Identities=15% Similarity=0.219 Sum_probs=121.5
Q ss_pred CHHHHHHHHHHcCCCCCCceeeC--CHHHHHHHHHHcCCCcEEEEeeeec-CcccccCeEEEeCCHHHHHHHHHHHHhcc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCM--NVDEAIKAAKKIGGNSWVIKAQIHA-GGRGKCGGIKLAQSLEQVEKYTKKILGMQ 80 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~--s~eea~~~a~~ig~~PvVvK~qi~~-ggrgk~GGV~l~~s~ee~~~a~~~~l~~~ 80 (974)
+.+..|++|+++|||+|++..++ +.+|+.++++++| +|+|+||.... +|| ||.+++|++|+.++++.+-
T Consensus 123 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g-~P~VvKp~~gg~~g~----Gv~~v~~~~el~~a~~~~~--- 194 (403)
T 3k5i_A 123 NKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQLG-YPLMLKSKTMAYDGR----GNFRVNSQDDIPEALEALK--- 194 (403)
T ss_dssp SHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHHC-SSEEEEESSSCCTTT----TEEEECSTTSHHHHHHHTT---
T ss_pred CHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHhC-CCEEEEeCCCCcCCC----CEEEECCHHHHHHHHHhcC---
Confidence 45778999999999999999999 9999999999999 99999995432 444 8999999999999887641
Q ss_pred ccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHH
Q psy3769 81 LITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNI 160 (974)
Q Consensus 81 ~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a 160 (974)
-..++||||++.++|+.+.+..|+. + +..+. . .|... .+.+....+.|...
T Consensus 195 ------------~~~~lvEe~i~~~~E~sv~v~~~~~-g--~~~~p-~----~~~~~---~~g~~~~~~~Pa~~------ 245 (403)
T 3k5i_A 195 ------------DRPLYAEKWAYFKMELAVIVVKTKD-E--VLSYP-T----VETVQ---EDSICKLVYAPARN------ 245 (403)
T ss_dssp ------------TSCEEEEECCCEEEEEEEEEEECSS-C--EEECC-C----EEEEE---ETTEEEEEEESCSS------
T ss_pred ------------CCcEEEecCCCCCeEEEEEEEEcCC-C--EEEeC-C----eeeEE---eCCEEEEEEeCCCC------
Confidence 0368999999988999999999964 2 22222 1 12221 12333444555322
Q ss_pred HHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEee
Q psy3769 161 DNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNF 218 (974)
Q Consensus 161 ~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~l 218 (974)
++++..+++.+++.++.+.+.-.++.-+| ++++++|+++.++.--+.
T Consensus 246 --------l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve---~~~~~dg~~~v~EiNpR~ 292 (403)
T 3k5i_A 246 --------VSDAINQKAQELARKAVAAFDGKGVFGVE---MFLLEDDSIMLCEIASRI 292 (403)
T ss_dssp --------CCHHHHHHHHHHHHHHHHTSCCSEEEEEE---EEEETTSCEEEEEEESSC
T ss_pred --------CCHHHHHHHHHHHHHHHHHcCCeeEEEEE---EEEeCCCcEEEEEeecCC
Confidence 34455667778888888877655677788 788888878777764333
No 36
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=99.03 E-value=5.2e-09 Score=119.53 Aligned_cols=167 Identities=13% Similarity=0.110 Sum_probs=120.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+|+.++++++| ||+|+||.... +.+-||.+++|++|+.++++.+..
T Consensus 112 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~~~---~~g~Gv~~v~~~~el~~~~~~~~~----- 182 (389)
T 3q2o_A 112 NRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELS-YPSVLKTTTGG---YDGKGQVVLRSEADVDEARKLANA----- 182 (389)
T ss_dssp SHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHC-SSEEEEESSCC---SSSCCEEEESSGGGHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHhcC-CCEEEEeCCCC---CCCCCeEEECCHHHHHHHHHhcCC-----
Confidence 456789999999999999999999999999999999 99999994322 112389999999999998876521
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
..++||||++.++|+.+.+..|.+ +.... +. -.|... +..+....+.|.
T Consensus 183 ----------~~~lvEe~i~g~~E~~v~~~~~~~-G~~~~-~~-----~~e~~~---~~g~~~~~~~p~----------- 231 (389)
T 3q2o_A 183 ----------AECILEKWVPFEKEVSVIVIRSVS-GETKV-FP-----VAENIH---VNNILHESIVPA----------- 231 (389)
T ss_dssp ----------SCEEEEECCCCSEEEEEEEEECTT-CCEEE-CC-----CEEEEE---ETTEEEEEEESC-----------
T ss_pred ----------CCEEEEecccCceEEEEEEEEcCC-CCEEE-ec-----CeeeEE---cCCceEEEECCC-----------
Confidence 257999999977999999999863 32322 21 112211 223444445552
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEe
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFN 217 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ 217 (974)
.+++...+++.++..++.+.+.-.++.-+| +++++||++++++.--+
T Consensus 232 ----~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve---~~~~~dg~~~viEiNpR 278 (389)
T 3q2o_A 232 ----RITEELSQKAIAYAKVLADELELVGTLAVE---MFATADGEIYINELAPR 278 (389)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTSCEEEEEEESS
T ss_pred ----CCCHHHHHHHHHHHHHHHHHcCCeeEEEEE---EEEeCCCCEEEEEeeCC
Confidence 134455667778888888877666677888 78888888887776433
No 37
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=99.02 E-value=3e-09 Score=121.09 Aligned_cols=173 Identities=16% Similarity=0.114 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHH----HHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDE----AIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGM 79 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~ee----a~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~ 79 (974)
+.+.+|++|+++|||+|++.++++.++ +.++++++| +|+||||....+++ ||.+++|++|+.+++++.+..
T Consensus 135 DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~~g-~PvvVKP~~~~~s~----Gv~~v~~~~el~~a~~~~~~~ 209 (377)
T 1ehi_A 135 DKALTKELLTVNGIRNTKYIVVDPESANNWSWDKIVAELG-NIVFVKAANQGSSV----GISRVTNAEEYTEALSDSFQY 209 (377)
T ss_dssp SHHHHHHHHHTTTCCCCCEEEECTTGGGGCCHHHHHHHHC-SCEEEEESSCCTTT----TEEEECSHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHcCCCCCCEEEEeccccchHHHHHHHHhcC-CCEEEEeCCCCCCc----CEEEeCCHHHHHHHHHHHHhc
Confidence 457889999999999999999988765 666777899 99999996544444 899999999999988876432
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHH
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNN 159 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~ 159 (974)
. ..++|||+++..+|+.+++..|+. +.++.. | |...... ++..++.++.
T Consensus 210 ~-------------~~vlvEe~I~G~~E~~v~vl~~~~---~~~~~~--~----ei~~~~~---------~~~~~~~d~~ 258 (377)
T 1ehi_A 210 D-------------YKVLIEEAVNGARELEVGVIGNDQ---PLVSEI--G----AHTVPNQ---------GSGDGWYDYN 258 (377)
T ss_dssp C-------------SCEEEEECCCCSCEEEEEEEESSS---CEEEEE--E----EEECTTS---------SSSSCCCCHH
T ss_pred C-------------CcEEEEcCCCCCceEEEEEEcCCC---cEEEee--E----EEEecCC---------CCcCceeCHH
Confidence 1 368999999944999999998853 111110 0 1110000 0011122222
Q ss_pred HHHH-------HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 160 IDNI-------SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 160 a~~~-------~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.... ..+..++++..+++.+++.++++.+...++.-+| ++++++|+++.++.-
T Consensus 259 ~k~~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD---~~~~~~g~~~vlEiN 318 (377)
T 1ehi_A 259 NKFVDNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMD---FLLDENNVPYLGEPN 318 (377)
T ss_dssp HHTTCCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEEE
T ss_pred hcccCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEEE---EEEeCCCCEEEEEEe
Confidence 1111 0012355667788889999999887666777788 777777777766553
No 38
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=99.01 E-value=3.7e-09 Score=122.57 Aligned_cols=101 Identities=24% Similarity=0.317 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| +|+|+||....+|| ||.+++|++|+.+++++++....
T Consensus 107 dK~~~k~~l~~~GIptp~~~~~~~~~ea~~~~~~~g-~PvVvKp~~~~gg~----GV~iv~~~~el~~a~~~~~~~~~-- 179 (431)
T 3mjf_A 107 SKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKG-APIVIKADGLAAGK----GVIVAMTQEEAETAVNDMLAGNA-- 179 (431)
T ss_dssp CHHHHHHHHHHTTCSBCCEEEESCHHHHHHHHHHHC-SSEEEEESSSCTTC----SEEEECSHHHHHHHHHHHHTTHH--
T ss_pred CHHHHHHHHHHcCCCCCCeEeeCCHHHHHHHHHHcC-CeEEEEECCCCCCC----cEEEeCCHHHHHHHHHHHHhhcc--
Confidence 456789999999999999999999999999999999 89999997666666 89999999999999999874311
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV 117 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~ 117 (974)
.+..-..++||||++ +.|+.+.+..|..
T Consensus 180 -----~g~~~~~vlvEe~i~-G~E~sv~~~~dg~ 207 (431)
T 3mjf_A 180 -----FGDAGHRIVVEEFLD-GEEASFIVMVDGE 207 (431)
T ss_dssp -----HHCCCCCEEEEECCC-SEEEEEEEEEESS
T ss_pred -----ccCCCCeEEEEEeeC-CcEEEEEEEEcCC
Confidence 111124789999999 7999999999864
No 39
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=99.00 E-value=4.3e-09 Score=119.24 Aligned_cols=164 Identities=13% Similarity=0.138 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeec-CcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHA-GGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~-ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| +|+|+||.... ||+ ||.+++|++|+.++++++.
T Consensus 96 dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~~~~~g~----Gv~~v~~~~el~~~~~~~~----- 165 (369)
T 3aw8_A 96 DRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVG-LPALLKTRRGGYDGK----GQALVRTEEEALEALKALG----- 165 (369)
T ss_dssp CHHHHHHHHHHHTCCCCCEEEESSHHHHHHHHTTTC-SSEEEEECCC----------EEEECSHHHHHHHHTTTC-----
T ss_pred CHHHHHHHHHHCCCCCCCceeeCCHHHHHHHHHHcC-CCEEEEEcCCCCCcc----eEEEECCHHHHHHHHHhcC-----
Confidence 567899999999999999999999999999999999 89999996555 555 9999999999998876541
Q ss_pred ccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHH
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDN 162 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~ 162 (974)
-..++||||++.++|+.+.+..|++ +.++. +. . .|.... .......+.|...+
T Consensus 166 ----------~~~~lvEe~i~~g~e~sv~~~~d~~-G~~~~-~~-~----~~~~~~---~~~~~~~~~p~~~l------- 218 (369)
T 3aw8_A 166 ----------GRGLILEGFVPFDREVSLLAVRGRT-GEVAF-YP-L----VENRHW---GGILRLSLAPAPGA------- 218 (369)
T ss_dssp ----------SSSEEEEECCCCSEEEEEEEEECTT-SCEEE-CC-C----EEEEEE---TTEEEEEEESCTTC-------
T ss_pred ----------CCcEEEEEcCCCCEEEEEEEEECCC-CCEEE-EC-C----eeeeee---CCEEEEEECCCCCC-------
Confidence 1368999999988999999999964 33332 22 1 122211 12222344453223
Q ss_pred HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 163 ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 163 ~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
++...+++.+++.++.+.+.-.++.-+| +++++ |+++.++.-
T Consensus 219 -------~~~~~~~~~~~a~~~~~~lg~~G~~~vd---~~~~~-~~~~viEiN 260 (369)
T 3aw8_A 219 -------SEALQKKAEAYALRAMEALDYVGVLALE---FFQVG-EELLFNEMA 260 (369)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEET-TEEEEEEEE
T ss_pred -------CHHHHHHHHHHHHHHHHHCCCeeEEEEE---EEEEC-CcEEEEEEe
Confidence 3344555666666776666444566677 66665 556665553
No 40
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=98.99 E-value=4.6e-09 Score=124.81 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=118.6
Q ss_pred CHHHHHHHHHHcCCCCCCcee-----------------------------eCCHHHHHHHHHHcCCCcEEEEeeeecCcc
Q psy3769 4 YEYQGKEILRKFNVTIPKGIL-----------------------------CMNVDEAIKAAKKIGGNSWVIKAQIHAGGR 54 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~-----------------------------~~s~eea~~~a~~ig~~PvVvK~qi~~ggr 54 (974)
+.+.+|++|+++|||+|++.. +.+.+|+.++++++| ||+||||....|||
T Consensus 164 DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~ig-yPvVVKp~~ggGG~ 242 (540)
T 3glk_A 164 DKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIG-FPLMIKASEGGGGK 242 (540)
T ss_dssp CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTTC----CCCCCHHHHHHTSCCSHHHHHHHHHHHC-SSEEEEETTCC---
T ss_pred CHHHHHHHHHHcCCCCCCcccccccccccccccccccccccccccccccCcCCHHHHHHHHHhcC-CcEEEEECCCCCCC
Confidence 467899999999999999987 889999999999999 99999996544444
Q ss_pred cccCeEEEeCCHHHHHHHHHHHHhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCccee
Q psy3769 55 GKCGGIKLAQSLEQVEKYTKKILGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIE 134 (974)
Q Consensus 55 gk~GGV~l~~s~ee~~~a~~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE 134 (974)
||++++|++|+.++++++..... -..++||||++..+|+.+.+..|+. +..+.++. .+.
T Consensus 243 ----Gv~iv~~~~eL~~a~~~~~~~~~-----------~~~vlVEe~I~g~rei~V~vl~d~~-G~vv~l~~----rd~- 301 (540)
T 3glk_A 243 ----GIRKAESAEDFPILFRQVQSEIP-----------GSPIFLMKLAQHARHLEVQILADQY-GNAVSLFG----RDC- 301 (540)
T ss_dssp -----EEEECSTTTHHHHHHHHHHHST-----------TCCEEEEECCSSEEEEEEEEEECTT-SCEEEEEE----EEE-
T ss_pred ----CEEEECCHHHHHHHHHHHHhhcc-----------CCCEEEEEecCCCcEEEEEEEEcCC-CCEEEEec----eee-
Confidence 89999999999999988765421 1468999999977999999999973 44433322 111
Q ss_pred eccccCCcceEEEEeCCCCCCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 135 IISKNSPELLYKTIIDPLIGLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 135 ~~~d~~p~~i~~~~i~p~~gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
.+.+.+. ++. ...|... ++++..+++.+.+.++.+.+.-.++.-+| ++++++|+++.++.
T Consensus 302 s~qr~~~-k~i--e~~Pa~~--------------l~~~~~~~l~~~a~~~~~alG~~G~~~VE---f~~d~dg~~~~lEi 361 (540)
T 3glk_A 302 SIQRRHQ-KIV--EEAPATI--------------APLAIFEFMEQCAIRLAKTVGYVSAGTVE---YLYSQDGSFHFLEL 361 (540)
T ss_dssp EEC---C-CSE--EEESCTT--------------SCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEETTSCEEEEEE
T ss_pred eeeeccc-ceE--EecCCCC--------------CCHHHHHHHHHHHHHHHHHcCCccceEEE---EEEcCCCCEEEEEE
Confidence 1122221 222 2223211 24455667777788888777555677788 67777887877775
Q ss_pred E
Q psy3769 215 K 215 (974)
Q Consensus 215 k 215 (974)
-
T Consensus 362 N 362 (540)
T 3glk_A 362 N 362 (540)
T ss_dssp E
T ss_pred E
Confidence 4
No 41
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=98.99 E-value=5.6e-09 Score=124.75 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=122.1
Q ss_pred CHHHHHHHHHHcCCCCCCcee-----------------------------eCCHHHHHHHHHHcCCCcEEEEeeeecCcc
Q psy3769 4 YEYQGKEILRKFNVTIPKGIL-----------------------------CMNVDEAIKAAKKIGGNSWVIKAQIHAGGR 54 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~-----------------------------~~s~eea~~~a~~ig~~PvVvK~qi~~ggr 54 (974)
+.+.+|++|+++|||+|++.. +++.+|+.++++++| ||+||||....|||
T Consensus 180 DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iG-yPvVVKp~~GgGGk 258 (587)
T 3jrx_A 180 DKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIG-FPLMIKASEGGGGK 258 (587)
T ss_dssp SHHHHHHHHHHTTCCBCCBTTTTCCCCC------CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHC-SSEEEEETTCCSSS
T ss_pred CHHHHHHHHHHcCCCCCCeecccccccccccccccccccccchhhccccccCCHHHHHHHHHhcC-CeEEEEeCCCCCCC
Confidence 457899999999999999987 889999999999999 99999996545555
Q ss_pred cccCeEEEeCCHHHHHHHHHHHHhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCccee
Q psy3769 55 GKCGGIKLAQSLEQVEKYTKKILGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIE 134 (974)
Q Consensus 55 gk~GGV~l~~s~ee~~~a~~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE 134 (974)
||++++|++|+.++++++..... -..++||||++..+|+.+.+..|. .+..+.++. .+.
T Consensus 259 ----Gv~iV~s~eEL~~a~~~a~~~~~-----------~~~vlVEeyI~g~rei~V~vl~D~-~G~vv~l~~----rd~- 317 (587)
T 3jrx_A 259 ----GIRKAESAEDFPILFRQVQSEIP-----------GSPIFLMKLAQHARHLEVQILADQ-YGNAVSLFG----RDC- 317 (587)
T ss_dssp ----SEEEECSTTTHHHHHHHHHHHST-----------TCCEEEEECCCSCEEEEEEEEECS-SSCEEEEEE----EEE-
T ss_pred ----CeEEeCCHHHHHHHHHHHHhhcc-----------CCCEEEEEecCCCcEEEEEEEEcC-CCCEEEEee----eec-
Confidence 89999999999999988765421 146899999997799999999996 344433332 111
Q ss_pred eccccCCcceEEEEeCCCCCCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 135 IISKNSPELLYKTIIDPLIGLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 135 ~~~d~~p~~i~~~~i~p~~gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
.+.+.+ .++ +...|... ++++..+++.+.+.++.+.+.-.++.-+| ++++++|+++.++.
T Consensus 318 siqrr~-qk~--ie~aPa~~--------------l~~~~~~~i~~~A~~~a~alGy~G~~~VE---fl~d~dG~~yflEI 377 (587)
T 3jrx_A 318 SIQRRH-QKI--VEEAPATI--------------APLAIFEFMEQCAIRLAKTVGYVSAGTVE---YLYSQDGSFHFLEL 377 (587)
T ss_dssp EEESSS-CEE--EEEESCCS--------------SCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEECSSSCEEEEEE
T ss_pred cccccc-cce--eEecCCCC--------------CCHHHHHHHHHHHHHHHHHcCCcceeEEE---EEEeCCCCEEEEEE
Confidence 122222 222 22234222 23445566777778888777555677788 77887887877765
Q ss_pred E
Q psy3769 215 K 215 (974)
Q Consensus 215 k 215 (974)
-
T Consensus 378 N 378 (587)
T 3jrx_A 378 N 378 (587)
T ss_dssp E
T ss_pred e
Confidence 3
No 42
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=98.97 E-value=7.9e-09 Score=119.01 Aligned_cols=172 Identities=18% Similarity=0.187 Sum_probs=115.5
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| +|+||||....||+ ||.+++|++|+.+++++++....
T Consensus 106 dK~~~k~~l~~~gip~p~~~~~~~~~e~~~~~~~~g-~PvvvKp~~~~gg~----Gv~~v~~~~el~~a~~~~~~~~~-- 178 (412)
T 1vkz_A 106 SKVYAKRFMKKYGIRTARFEVAETPEELREKIKKFS-PPYVIKADGLARGK----GVLILDSKEETIEKGSKLIIGEL-- 178 (412)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHTTSC-SSEEEEESSCCSSC----CEEEESSHHHHHHHHHHHHHTSS--
T ss_pred CHHHHHHHHHHcCCCCCCEEEECCHHHHHHHHHhcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHhhcc--
Confidence 456789999999999999999999999999999999 89999996655555 89999999999999998875320
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCC--cceE---EEEeCCCCCCCHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSP--ELLY---KTIIDPLIGLTKN 158 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p--~~i~---~~~i~p~~gl~~~ 158 (974)
+ .+. ...++||||++ ++|+.+.+..|.+.-.+ +.. .+....... .+.. ...+.|..
T Consensus 179 -~---~g~-~~~vlvEe~i~-G~E~sv~~~~dg~~~~~--~~~------~~~~~~~~~~~~~~~~g~~~~~~P~~----- 239 (412)
T 1vkz_A 179 -I---KGV-KGPVVIDEFLA-GNELSAMAVVNGRNFVI--LPF------VRDYKRLMDGDRGPNTGGMGSWGPVE----- 239 (412)
T ss_dssp -S---TTC-CSCEEEEECCC-SEEEEEEEEEETTEEEE--CCC------CEECCEEETTTEEEECSCSEEEECCC-----
T ss_pred -c---cCC-CCeEEEEECCc-CcEEEEEEEECCCEEEE--eee------eEeeeeccCCCCCCCCCCceEEECCC-----
Confidence 0 111 12689999999 89999999988542111 111 111110000 0000 01222321
Q ss_pred HHHHHHHHCCCChhhHHHHHHHHHHHHhhcc----c-CCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 159 NIDNISKKISIPKNSLINFYEEIQNIYKSYW----E-TDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 159 ~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~----~-~d~~~lEINPL~v~~~g~~~alDak 215 (974)
++++..+++.+++.++.+.+. . .++.-+| ++++++| +++++.-
T Consensus 240 ----------l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve---~~~~~~g-~~viEiN 287 (412)
T 1vkz_A 240 ----------IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLG---LMLHDGD-PYILEYN 287 (412)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE---EEEETTE-EEEEEEE
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEE---EEEECCC-cEEEEEe
Confidence 334455666777777777662 2 2566778 7788787 7766654
No 43
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=98.96 E-value=3.9e-09 Score=118.71 Aligned_cols=166 Identities=13% Similarity=0.075 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++.++++.+ ...++++| +|+||||....+++ ||.++++++|+.+++++++..
T Consensus 132 dK~~~k~~l~~~Gip~p~~~~~~~~~--~~~~~~lg-~PvvvKP~~~~~s~----Gv~~v~~~~el~~a~~~~~~~---- 200 (346)
T 3se7_A 132 DKSLTYLVARSAGIATPNFWTVTADE--KIPTDQLT-YPVFVKPARSGSSF----GVSKVAREEDLQGAVEAAREY---- 200 (346)
T ss_dssp SHHHHHHHHHHTTCBCCCEEEEETTS--CCCTTTCC-SSEEEEESSCCTTT----TCEEECSHHHHHHHHHHHTTT----
T ss_pred CHHHHHHHHHHcCcCcCCEEEEcCcH--HHHHHhcC-CCEEEEeCCCCCCc----CEEEECCHHHHHHHHHHHHhC----
Confidence 45778999999999999999998765 33456788 89999995433333 888999999999998886532
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHH----H
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKN----N 159 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~----~ 159 (974)
-..++|||+++ ++|+.+++..|.. .+.++.. .|.. +..++.++ +
T Consensus 201 ---------~~~vlvEe~I~-G~E~~v~vl~~~~--~~~~~~~------~e~~--------------~~~~~~d~~q~~~ 248 (346)
T 3se7_A 201 ---------DSKVLIEEAVI-GTEIGCAVMGNGP--ELITGEV------DQIT--------------LSHGFFKIHQEST 248 (346)
T ss_dssp ---------CSEEEEEECCC-SEEEEEEEEEETT--EEEECCC------EEEC--------------CC-----------
T ss_pred ---------CCcEEEEeCcC-CEEEEEEEEecCC--CeEEEee------EEEe--------------cCCCCcCcccchh
Confidence 14789999999 8999999999852 2211110 0110 00011111 1
Q ss_pred HHHH------HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 160 IDNI------SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 160 a~~~------~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
+... ..+..++++..+++.+++.++++.+...+..-+| ++++++|+++.++.-
T Consensus 249 ~ky~~~~~~~~~pa~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD---~~~~~~g~~~vlEiN 307 (346)
T 3se7_A 249 PESGSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVD---LFLTEDGKVVLNEVN 307 (346)
T ss_dssp ---CGGGSCEESSCCCCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEECTTSCEEEEEEE
T ss_pred ccccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEE---EEEeCCCCEEEEEEe
Confidence 1000 0112456677788899999999988777788888 788888888877653
No 44
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=6.5e-11 Score=109.65 Aligned_cols=97 Identities=25% Similarity=0.311 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| ||+|+||....+|+ ||.+++|++|+.+++++++....
T Consensus 8 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~-~P~vvKp~~~~~~~----gv~~v~~~~el~~~~~~~~~~~~ 82 (108)
T 2cqy_A 8 DKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIG-YPVMIKASAGGGGK----GMRIAWDDEETRDGFRLSSQEAA 82 (108)
T ss_dssp CCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHC-SSEEEEETTSCCTT----TCEEESSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcC-CCEEEEECCCCCCc----cEEEeCCHHHHHHHHHHHHHHHH
Confidence 45677899999999999998 8899999999999999 89999996433333 89999999999999988865321
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEE
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISF 112 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi 112 (974)
.+ .+ -..++||||++..+|+.+++
T Consensus 83 --~~---~~--~~~~lvee~i~g~~E~~v~v 106 (108)
T 2cqy_A 83 --SS---FG--DDRLLIEKFIDNPRHISGPS 106 (108)
T ss_dssp --HH---TS--SCCEEEEECCSSSSCCCSCC
T ss_pred --hh---cC--CCcEEEeeccCCCcEEEEEe
Confidence 00 01 14689999999767877654
No 45
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=98.94 E-value=2.4e-08 Score=113.07 Aligned_cols=167 Identities=9% Similarity=0.112 Sum_probs=115.1
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHH-------HHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHH
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVD-------EAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKI 76 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~e-------ea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~ 76 (974)
+.+..|++|+++|||+|++..+++.+ ++.++++++| +|+||||....+++ ||.++++++|+.++++++
T Consensus 129 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~~~~~~g-~PvvvKP~~g~~s~----Gv~~v~~~~el~~a~~~~ 203 (364)
T 2i87_A 129 DKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLN-YPVFVKPANLGSSV----GISKCNNEAELKEGIKEA 203 (364)
T ss_dssp SHHHHHHHHHHHTCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC-SSEEEEESSCSSCT----TCEEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCEEEEechhhcccchhHHHHHHHhcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHH
Confidence 35678999999999999999998776 4666778899 89999995444333 899999999999988876
Q ss_pred HhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCC
Q psy3769 77 LGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLT 156 (974)
Q Consensus 77 l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~ 156 (974)
+... ..++|||+++ ++|+.+.+..|+. +.++. .| |.... .++.
T Consensus 204 ~~~~-------------~~~lvEe~I~-G~E~~v~vl~~~~---~~~~~--~~----e~~~~--------------~~~~ 246 (364)
T 2i87_A 204 FQFD-------------RKLVIEQGVN-AREIEVAVLGNDY---PEATW--PG----EVVKD--------------VAFY 246 (364)
T ss_dssp HTTC-------------SEEEEEECCC-CEEEEEEEEESSS---CEECC--CE----EECCS--------------CCC-
T ss_pred HhcC-------------CeEEEEeCcc-CeEEEEEEEcCCC---cEEee--eE----EEecC--------------CCcC
Confidence 5321 4789999999 7999999998863 21111 11 11110 0010
Q ss_pred HHHHHH------HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 157 KNNIDN------ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 157 ~~~a~~------~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
++.... ...+..++++..+++.++..++++.+...+..-+| ++++++|+++.++.-
T Consensus 247 ~~~~k~~~g~~~~~~pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD---~~~~~~g~~~viEiN 308 (364)
T 2i87_A 247 DYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRAD---FFVTEDNQIYINETN 308 (364)
T ss_dssp ----------CCEESSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEEE
T ss_pred CHHHcccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEEE---EEEecCCCEEEEEEe
Confidence 110000 00112355667788899999999988766788888 788888877776653
No 46
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=98.94 E-value=7e-09 Score=120.63 Aligned_cols=174 Identities=18% Similarity=0.267 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| ||+|+||..-.||+ ||.+++|++|+.++++++.....
T Consensus 119 dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~ 193 (446)
T 3ouz_A 119 DKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIG-YPVILKAAAGGGGR----GMRVVENEKDLEKAYWSAESEAM 193 (446)
T ss_dssp SHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHC-SSEEEEETTCCTTC----SEEEECSGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhC-CCEEEEECCCCCCC----CEEEECCHHHHHHHHHHHHHHHH
Confidence 35678999999999999997 7899999999999999 99999996444444 89999999999999988765321
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
. . .+ -..++||||++..+|+.+.+..|.. +..+.+.. .+. .+...+ .+ .....|..
T Consensus 194 ~--~---~~--~~~~lvEe~i~g~~e~~v~v~~d~~-g~~~~~~~----~~~-~~~~~~-~~--~~~~~p~~-------- 249 (446)
T 3ouz_A 194 T--A---FG--DGTMYMEKYIQNPRHIEVQVIGDSF-GNVIHVGE----RDC-SMQRRH-QK--LIEESPAI-------- 249 (446)
T ss_dssp H--H---HS--CCCEEEEECCSSCEEEEEEEEECTT-SCEEEEEE----EEE-EEEETT-EE--EEEEESCT--------
T ss_pred H--h---cC--CCCEEEEeCCCCCcEEEEEEEEcCC-CCEEEEee----cee-eeeecC-ce--EEEECCCC--------
Confidence 0 0 00 1368999999977999999999974 33332221 110 111111 11 12334422
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.+++...+++.+.+.++.+.+.-.++.-+| ++++++|+++.++.-
T Consensus 250 ------~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve---~~~~~~g~~~~iEiN 294 (446)
T 3ouz_A 250 ------LLDEKTRTRLHETAIKAAKAIGYEGAGTFE---FLVDKNLDFYFIEMN 294 (446)
T ss_dssp ------TSCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEEE
T ss_pred ------CCCHHHHHHHHHHHHHHHHHcCCCCceEEE---EEEeCCCCEEEEEeE
Confidence 234455667777777777776555666778 788887777776653
No 47
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=98.93 E-value=1.1e-08 Score=115.59 Aligned_cols=167 Identities=13% Similarity=0.118 Sum_probs=114.1
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHH---HHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDE---AIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQ 80 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~ee---a~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~ 80 (974)
+-+.+|++|+++|||||++..+++.++ ..++++++| ||+||||....++ -||.+++|++|+.+++++....
T Consensus 139 DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~lg-~PvvVKP~~gg~s----~Gv~~v~~~~el~~~~~~a~~~- 212 (357)
T 4fu0_A 139 DKDRAHKLVSLAGISVPKSVTFKRFNEEAAMKEIEANLT-YPLFIKPVRAGSS----FGITKVIEKQELDAAIELAFEH- 212 (357)
T ss_dssp CHHHHHHHHHHTTCBCCCEEEEEGGGHHHHHHHHHHHCC-SSEEEEETTCSSS----TTCEEESSHHHHHHHHHHHTTT-
T ss_pred CHHHHHHHHHHCCCCCCCEEeecCCChHHHHHHHHHhcC-CCEEEEECCCCCC----CceEEeccHHhHHHHHHHHhcc-
Confidence 356789999999999999998865443 356677899 9999999432222 2899999999999988775432
Q ss_pred ccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCccee----eccccC-CcceEEEEeCCCCCC
Q psy3769 81 LITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIE----IISKNS-PELLYKTIIDPLIGL 155 (974)
Q Consensus 81 ~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE----~~~d~~-p~~i~~~~i~p~~gl 155 (974)
-..+++|++++ ++|+.+++..|... .+... +-.... ....+. ++. . ..+.|
T Consensus 213 ------------~~~vlvE~~i~-G~e~~v~vl~~~~~--~~~~v---~~~~~~~~~~d~~~k~~~~~-~-~~~~p---- 268 (357)
T 4fu0_A 213 ------------DTEVIVEETIN-GFEVGCAVLGIDEL--IVGRV---DEIELSSGFFDYTEKYTLKS-S-KIYMP---- 268 (357)
T ss_dssp ------------CSEEEEEECCC-SEEEEEEEEESSSE--EECCC---EEEEECHHHHTSCSBCSSCC-E-EEESS----
T ss_pred ------------CCeEEEEEecC-CEEEEEEEEecCCc--eEEEE---EEEEcccccccccccccCCC-c-eEecC----
Confidence 14789999997 89999999887532 11110 000000 000001 111 1 12222
Q ss_pred CHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 156 TKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 156 ~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
..++++..+++.++..++++.+...++.-+| +++++||+++.++.
T Consensus 269 -----------a~l~~~~~~~i~~~A~~~~~aLg~~G~~~VD---f~~~~dg~~~vlEv 313 (357)
T 4fu0_A 269 -----------ARIDAEAEKRIQEAAVTIYKALGCSGFSRVD---MFYTPSGEIVFNEV 313 (357)
T ss_dssp -----------CSCCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEE
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHHhCCcceEEEE---EEEeCCCCEEEEEE
Confidence 2356667788899999999998877888899 88888998877654
No 48
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=98.91 E-value=1.1e-08 Score=116.53 Aligned_cols=165 Identities=20% Similarity=0.227 Sum_probs=118.0
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeec-CcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHA-GGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~-ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
.+..|++|+++|||+|++..+++.+|+.++++++| +|+|+||.... +|| ||.+++|++|+.++++.+.+
T Consensus 111 K~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~gg~~g~----Gv~~v~~~~el~~a~~~~~~----- 180 (377)
T 3orq_A 111 RLTEKETLKSAGTKVVPFISVKESTDIDKAIETLG-YPFIVKTRFGGYDGK----GQVLINNEKDLQEGFKLIET----- 180 (377)
T ss_dssp HHHHHHHHHHTTCCBCCEEEECSSTHHHHHHHHTC-SSEEEEESSSCCTTT----TEEEECSTTSHHHHHHHHTT-----
T ss_pred HHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHHcC-CCEEEEeCCCCCCCC----CeEEECCHHHHHHHHHhcCC-----
Confidence 46789999999999999999999999999999999 99999995322 333 89999999999998887632
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
..++||||++..+|+.+.+.+|.. +.. ..+. . .|... .+.+....+.|.
T Consensus 181 ----------~~~ivEe~i~g~~E~sv~~~~~~~-g~~-~~~~-~----~e~~~---~~g~~~~~~~Pa----------- 229 (377)
T 3orq_A 181 ----------SECVAEKYLNIKKEVSLTVTRGNN-NQI-TFFP-L----QENEH---RNQILFKTIVPA----------- 229 (377)
T ss_dssp ----------SCEEEEECCCEEEEEEEEEEECGG-GCE-EECC-C----EEEEE---ETTEEEEEEESC-----------
T ss_pred ----------CcEEEEccCCCCEEEEEEEEEeCC-CCE-EEEC-C----EeEEE---ECCEEEEEECCC-----------
Confidence 357999999976999999998863 323 2222 1 12211 123333444442
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEeee
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNFD 219 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~ld 219 (974)
.+++ .+++.+++.++.+.+.-.++.-+| ++++++|++++++.--++.
T Consensus 230 ----~l~~--~~~~~~~a~~i~~~lg~~G~~~ve---~~~~~~g~~~v~EinpR~~ 276 (377)
T 3orq_A 230 ----RIDK--TAEAKEQVNKIIQSIHFIGTFTVE---FFIDSNNQLYVNEIAPRPH 276 (377)
T ss_dssp ----SSCC--HHHHHHHHHHHHTTSCCCEEEEEE---EEEETTCCEEEEEEESSCC
T ss_pred ----CCCH--HHHHHHHHHHHHHHCCCeEEEEEE---EEEeCCCcEEEEEeeCCcC
Confidence 1222 556777778888777656677788 7888778788777654443
No 49
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=98.91 E-value=1.3e-08 Score=117.50 Aligned_cols=167 Identities=8% Similarity=0.051 Sum_probs=119.2
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHH----cCCCcEEEEee-eecCcccccCeEEEeCCHHHHHHHHHHHHh
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKK----IGGNSWVIKAQ-IHAGGRGKCGGIKLAQSLEQVEKYTKKILG 78 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~----ig~~PvVvK~q-i~~ggrgk~GGV~l~~s~ee~~~a~~~~l~ 78 (974)
+-+..|++|+++|||+|++..+++.+|+.+++++ + ||+|+||. .-.+|| ||.+++|++|+.++++.+ +
T Consensus 133 dK~~~k~~l~~~Gip~p~~~~v~~~~e~~~~~~~~~~~~--~P~VvKp~~~g~~G~----Gv~~v~~~~el~~a~~~~-~ 205 (419)
T 4e4t_A 133 DRIAEKRFIEASGVPVAPHVVIESAAALAALDDAALDAV--LPGILKTARLGYDGK----GQVRVSTAREARDAHAAL-G 205 (419)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEECSHHHHHTSCHHHHHTT--CSEEEEESSSCCTTT----TEEEECSHHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhhcccc--CCEEEEecCCCCCCC----ceEEECCHHHHHHHHHhc-C
Confidence 3567899999999999999999999999888887 7 79999994 333333 899999999999988764 1
Q ss_pred ccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHH
Q psy3769 79 MQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKN 158 (974)
Q Consensus 79 ~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~ 158 (974)
-..++||||++.++|+.+.+.+|.. +.. ..+.. +|.. +.+.+....+.|...++
T Consensus 206 --------------~~~~lvEe~i~~~~Eisv~v~~~~~-G~~-~~~~~-----~e~~---~~~g~~~~~~~Pa~~l~-- 259 (419)
T 4e4t_A 206 --------------GVPCVLEKRLPLKYEVSALIARGAD-GRS-AAFPL-----AQNV---HHNGILALTIVPAPAAD-- 259 (419)
T ss_dssp --------------TCCEEEEECCCEEEEEEEEEEECTT-SCE-EECCC-----EEEE---EETTEEEEEEESCTTCC--
T ss_pred --------------CCcEEEeecCCCCeEEEEEEEEcCC-CCE-EEEeC-----eEEE---eeCCeEEEEEcCCCCCC--
Confidence 0358999999988999999999864 323 22221 2332 22345555566633233
Q ss_pred HHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEEEee
Q psy3769 159 NIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIKFNF 218 (974)
Q Consensus 159 ~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDaki~l 218 (974)
+...+++.+++.++.+.+.-.++.-+| +++++||++++++.--++
T Consensus 260 ------------~~~~~~~~~~a~~i~~~lg~~G~~~vE---~~~~~dG~~~v~EiNpR~ 304 (419)
T 4e4t_A 260 ------------TARVEEAQQAAVRIADTLGYVGVLCVE---FFVLEDGSFVANEMAPRP 304 (419)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEETTCCEEEEEEESSC
T ss_pred ------------HHHHHHHHHHHHHHHHHCCCeeEEEEE---EEEeCCCCEEEEEEeCCC
Confidence 344556677777777776555677788 788888877776654333
No 50
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=98.90 E-value=2.6e-08 Score=115.86 Aligned_cols=173 Identities=20% Similarity=0.296 Sum_probs=118.4
Q ss_pred HHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 5 EYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
.+.+|++|+++|||+|++. .+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++....
T Consensus 115 K~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~- 188 (451)
T 1ulz_A 115 KARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIG-YPVLLKATAGGGGR----GIRICRNEEELVKNYEQASREAE- 188 (451)
T ss_dssp HHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHC-SSEEEEECSSSSCC----SCEEESSHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcC-CCEEEEECCCCCCc----cEEEeCCHHHHHHHHHHHHHHHH-
Confidence 4678999999999999998 7899999999999999 89999996655555 89999999999999888765311
Q ss_pred ccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHH
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDN 162 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~ 162 (974)
+. .+ -..++|||+++..+|+.+.+..|. .+..+.+.. .. ......+ .......|...
T Consensus 189 -~~---~~--~~~~lvEe~i~g~~e~~v~v~~~~-~G~~~~~~~----~~-~~~~~~~---~~~~~~~P~~~-------- 245 (451)
T 1ulz_A 189 -KA---FG--RGDLLLEKFIENPKHIEYQVLGDK-HGNVIHLGE----RD-CSIQRRN---QKLVEIAPSLI-------- 245 (451)
T ss_dssp -HT---TS--CCCEEEEECCCSCEEEEEEEEECT-TSCEEEEEE----EE-EEEEETT---EEEEEEESCSS--------
T ss_pred -Hh---cC--CCeEEEEEcccCCeEEEEEEEEcC-CCCEEEEee----ee-ccccccc---ccceeECCccc--------
Confidence 00 11 146899999997789999999986 333432221 00 0111111 11223334211
Q ss_pred HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 163 ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 163 ~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
+++...+++.+...++.+.+.-.++.-+| ++++++|+++.++.-
T Consensus 246 ------l~~~~~~~i~~~a~~~~~~lg~~G~~~ve---~~~~~~g~~~viEiN 289 (451)
T 1ulz_A 246 ------LTPEKREYYGNIVTKAAKEIGYYNAGTME---FIADQEGNLYFIEMN 289 (451)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEECTTCCEEEEEEE
T ss_pred ------CCHHHHHHHHHHHHHHHHHcCCCcceEEE---EEEeCCCCEEEEEee
Confidence 33445566677777777765544566788 788888877776654
No 51
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=98.88 E-value=9.7e-09 Score=116.76 Aligned_cols=168 Identities=10% Similarity=0.061 Sum_probs=114.6
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHH--HHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDE--AIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~ee--a~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+..|++|+++|||+|++.++++.++ +.+.++++| +|+||||....+++ ||.+++|++|+.+++++++...
T Consensus 151 DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~lg-~PvvVKP~~ggss~----GV~~v~~~~eL~~a~~~a~~~~- 224 (373)
T 3lwb_A 151 DKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECERLG-LPVFVKPARGGSSI----GVSRVSSWDQLPAAVARARRHD- 224 (373)
T ss_dssp BHHHHHHHHHHTTCCBCCEEEECTTCCCCCHHHHHHHC-SCEEEEESBCSTTT----TCEEECSGGGHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHcCcCCCCEEEEECcccchhHHHHHhcC-CCEEEEeCCCCCCC----CEEEeCCHHHHHHHHHHHHhcC-
Confidence 356789999999999999999988765 234467899 99999995433333 8999999999999988875421
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCC----CCH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIG----LTK 157 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~g----l~~ 157 (974)
..++|||+++ ++|+.+++..|+... +. ++..| |.... ...+ +.+
T Consensus 225 ------------~~vlVEe~I~-G~E~~v~vl~~~~~~-~~--~~~~~----ei~~~------------~~~~~~~~~~d 272 (373)
T 3lwb_A 225 ------------PKVIVEAAIS-GRELECGVLEMPDGT-LE--ASTLG----EIRVA------------GVRGREDSFYD 272 (373)
T ss_dssp ------------SSEEEEECCE-EEEEEEEEEECTTSC-EE--ECCCE----EEECC------------STTCSEESSSC
T ss_pred ------------CCEEEeCCCC-CeEEEEEEEECCCCc-eE--Eeeee----EEEcc------------CCCCccccccc
Confidence 3689999999 899999999886331 11 11011 11100 0001 222
Q ss_pred HHHHHHH------HHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEE
Q psy3769 158 NNIDNIS------KKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLD 213 (974)
Q Consensus 158 ~~a~~~~------~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alD 213 (974)
+++...- .+..++++..+++.+++.++++.+...++.-+| ++++++|+ +.++
T Consensus 273 ~~~ky~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vD---f~~~~dg~-~vlE 330 (373)
T 3lwb_A 273 FATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVD---FFLTDDGP-VINE 330 (373)
T ss_dssp HHHHHTCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCSEEEEE---EEEETTEE-EEEE
T ss_pred hhhcccCCCceEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEE---EEEECCCC-EEEE
Confidence 2221110 112456677888999999999998777888889 78888885 5544
No 52
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=98.87 E-value=2.5e-08 Score=116.14 Aligned_cols=101 Identities=25% Similarity=0.295 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+|+.+++++++ +|+|+||....+|| ||.+++|++|+.+++++++....
T Consensus 123 dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~-~PvVvKp~~~~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 195 (451)
T 2yrx_A 123 SKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKG-APIVIKADGLAAGK----GVTVAQTVEEALAAAKAALVDGQ-- 195 (451)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHC-SSEEEEECC----C----CEEEESSHHHHHHHHHHHHHHSC--
T ss_pred CHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHhcC-CcEEEEeCCCCCCC----cEEEECCHHHHHHHHHHHHhccc--
Confidence 356789999999999999999999999999999999 89999997655555 89999999999999988865321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV 117 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~ 117 (974)
.+.....++||||++ +.|+.+.+..|.+
T Consensus 196 -----~g~~~~~~lvEe~i~-G~E~sv~~~~dG~ 223 (451)
T 2yrx_A 196 -----FGTAGSQVVIEEYLE-GEEFSFMAFVNGE 223 (451)
T ss_dssp -----CBTTBCCEEEEECCC-SEEEEEEEEEETT
T ss_pred -----cCCCCCeEEEEECCc-CcEEEEEEEEcCC
Confidence 122235799999999 8999999988753
No 53
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=98.85 E-value=1.7e-08 Score=111.07 Aligned_cols=165 Identities=17% Similarity=0.214 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHH-HHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIK-AAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~-~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
+.+.+|++|+++|||+|++.++++.+++.+ +++++| +|+|+||....+++ ||.++++++|+.+++++++...
T Consensus 97 dK~~~~~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~-~P~vvKP~~~~~s~----Gv~~v~~~~el~~~~~~~~~~~-- 169 (307)
T 3r5x_A 97 DKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLG-FPLVVKPNSGGSSV----GVKIVYDKDELISMLETVFEWD-- 169 (307)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEEESSSCCCHHHHHHHC-SSEEEEECC----C----CCEEECSHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHCCCCCCCEEEEeChhhhhHHHHHhcC-CCEEEEeCCCCCCC----CEEEeCCHHHHHHHHHHHHhcC--
Confidence 456789999999999999999988777654 677888 89999996555444 8999999999999988876431
Q ss_pred ccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEE--EEeCCCCCCCHHHH
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYK--TIIDPLIGLTKNNI 160 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~--~~i~p~~gl~~~~a 160 (974)
..++||||++ ++|+.+.+..++ ..+++-+.. ..+ .+ +. ..+... ....|
T Consensus 170 -----------~~~lvee~i~-G~e~~v~v~~g~-~~~~~~~~~-~~~----~~-~~-~~~~~~~g~~~~p--------- 220 (307)
T 3r5x_A 170 -----------SEVVIEKYIK-GEEITCSIFDGK-QLPIISIRH-AAE----FF-DY-NAKYDDASTIEEV--------- 220 (307)
T ss_dssp -----------SEEEEEECCC-SEEEEEEEETTE-ECCCEEEEE-EEE----EE-TT-EEEEEEEEEEEEE---------
T ss_pred -----------CCEEEECCcC-CEEEEEEEECCE-EeeEEEEEc-CCc----cc-Ch-hhcCCCCCCeEec---------
Confidence 4789999999 799999985442 221211111 110 00 00 001100 00002
Q ss_pred HHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 161 DNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 161 ~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
..++++..+++.+++.++.+.+...+..-+| ++++ +|+++.++.
T Consensus 221 ------~~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD---~~~~-~g~~~vlEi 264 (307)
T 3r5x_A 221 ------IELPAELKERVNKASLACYKALKCSVYARVD---MMVK-DGIPYVMEV 264 (307)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHTTCCSEEEEE---EEEE-TTEEEEEEE
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHhCCCceEEEE---EEEE-CCeEEEEEE
Confidence 1244556677788888888888766777788 6777 566777665
No 54
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=98.84 E-value=5e-08 Score=116.64 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=120.7
Q ss_pred CHHHHHHHHHHcCCCCCCceee--------------------------CCHHHHHHHHHHcCCCcEEEEeeeecCccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILC--------------------------MNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKC 57 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~--------------------------~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~ 57 (974)
+.+.+|++|+++|||+|++..+ ++.+|+.++++++| +|+|+||....|||
T Consensus 173 dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g-~PvVvKp~~g~gg~--- 248 (554)
T 1w96_A 173 DKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIG-FPVMIKASEGGGGK--- 248 (554)
T ss_dssp SHHHHHHHHHHTTCCBCCBTTTTCCCCEECTTTCCEECCHHHHGGGSCSSHHHHHHHHHHHC-SSEEEEETTCCTTT---
T ss_pred CHHHHHHHHHHCCCCcCCccccccccccccccccccccccccccccCCCCHHHHHHHHHHcC-CCEEEEECCCCCCc---
Confidence 4567899999999999998764 78999999999999 89999996655555
Q ss_pred CeEEEeCCHHHHHHHHHHHHhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeecc
Q psy3769 58 GGIKLAQSLEQVEKYTKKILGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIIS 137 (974)
Q Consensus 58 GGV~l~~s~ee~~~a~~~~l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~ 137 (974)
||.+++|++|+.++++++..... -..++|||+++.++|+.+.+..|. .+.++.+.. .+. .+.
T Consensus 249 -Gv~~v~~~~el~~a~~~~~~~~~-----------~~~vlvEe~i~g~~e~sv~vl~d~-~G~vv~l~~----~~~-~~~ 310 (554)
T 1w96_A 249 -GIRQVEREEDFIALYHQAANEIP-----------GSPIFIMKLAGRARHLEVQLLADQ-YGTNISLFG----RDC-SVQ 310 (554)
T ss_dssp -TEEEECSHHHHHHHHHHHHHHST-----------TCCEEEEECCCSCEEEEEEEEECT-TSCEEEEEE----EEE-EEE
T ss_pred -eEEEECCHHHHHHHHHHHHhhcc-----------CCCEEEEEecCCCcEEEEEEEEcC-CCCEEEEee----eee-eeE
Confidence 89999999999999988765321 146899999997899999999986 343433322 111 112
Q ss_pred ccCCcceEEEEeCCCCCCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEc-cCCcEEEEEEEE
Q psy3769 138 KNSPELLYKTIIDPLIGLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVIN-SKNKIISLDIKF 216 (974)
Q Consensus 138 d~~p~~i~~~~i~p~~gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~-~~g~~~alDaki 216 (974)
+.++. . +...|... +++...+++.+++.++.+.+.-.++.-+| ++++ ++|+++.++.--
T Consensus 311 ~~~~k-~--~~~~P~~~--------------l~~~~~~~i~~~a~~~~~alg~~G~~~ve---~~~~~~dg~~~~iEiN~ 370 (554)
T 1w96_A 311 RRHQK-I--IEEAPVTI--------------AKAETFHEMEKAAVRLGKLVGYVSAGTVE---YLYSHDDGKFYFLELNP 370 (554)
T ss_dssp ETTEE-E--EEEESCCS--------------SCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEECTTTCCEEEEEEEC
T ss_pred eeccc-e--eeeCCCcC--------------CCHHHHHHHHHHHHHHHHHcCCcceEEEE---EEEECCCCCEEEEEeeC
Confidence 22211 1 12334211 23445566777777777776555677788 7786 677787777654
Q ss_pred ee
Q psy3769 217 NF 218 (974)
Q Consensus 217 ~l 218 (974)
++
T Consensus 371 R~ 372 (554)
T 1w96_A 371 RL 372 (554)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 55
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=98.83 E-value=4.8e-08 Score=113.69 Aligned_cols=173 Identities=23% Similarity=0.258 Sum_probs=117.4
Q ss_pred HHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 5 EYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
.+.+|++|+++|||+|++. .+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++....
T Consensus 115 K~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~- 188 (451)
T 2vpq_A 115 KDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIG-YPVIIKATAGGGGK----GIRVARDEKELETGFRMTEQEAQ- 188 (451)
T ss_dssp HHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHC-SSEEEEETTCCTTC----SEEEESSHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcC-CcEEEEECCCCCCC----CEEEeCCHHHHHHHHHHHHHHHH-
Confidence 4678999999999999977 8899999999999999 89999996555555 89999999999999888764311
Q ss_pred ccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHH
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDN 162 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~ 162 (974)
+. .+ -..++||||++..+|+.+.+..|.. +..+.+.. .+. .....+ .......|...
T Consensus 189 -~~---~~--~~~~lvEe~i~g~~e~~v~v~~~~~-G~~~~~~~----~~~-~~~~~~---~~~~~~~P~~~-------- 245 (451)
T 2vpq_A 189 -TA---FG--NGGLYMEKFIENFRHIEIQIVGDSY-GNVIHLGE----RDC-TIQRRM---QKLVEEAPSPI-------- 245 (451)
T ss_dssp -HH---HS--CCCEEEEECCCSEEEEEEEEEECTT-SCEEEEEE----EEE-EEEETT---EEEEEEESCTT--------
T ss_pred -hh---cC--CCcEEEEEecCCCeEEEEEEEEcCC-CCEEEEec----ccc-chhccc---cceEEEcCCCC--------
Confidence 00 01 1468999999976899999999863 33322210 000 011111 11122334211
Q ss_pred HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEc-cCCcEEEEEEE
Q psy3769 163 ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVIN-SKNKIISLDIK 215 (974)
Q Consensus 163 ~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~-~~g~~~alDak 215 (974)
+++...+++.+.+.++.+.+.-.++.-+| ++++ ++|+++.++.-
T Consensus 246 ------l~~~~~~~i~~~a~~~~~~lg~~G~~~ve---~~~~~~~g~~~viEiN 290 (451)
T 2vpq_A 246 ------LDDETRREMGNAAVRAAKAVNYENAGTIE---FIYDLNDNKFYFMEMN 290 (451)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEEETTTTEEEEEEEE
T ss_pred ------CCHHHHHHHHHHHHHHHHHcCCcceEEEE---EEEECCCCCEEEEEee
Confidence 34445566777777777766544566788 7787 77877766654
No 56
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.83 E-value=2.9e-08 Score=127.23 Aligned_cols=169 Identities=17% Similarity=0.234 Sum_probs=115.1
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|+|+|++..+++.+|+.++++++| ||+|+||....||+ ||.+++|++|+.+++++++....
T Consensus 128 DK~~~k~~l~~~Gipvp~~~~v~~~~ea~~~~~~ig-~PvVvKp~~~~Gg~----Gv~iv~~~eel~~~~~~~~~~~~-- 200 (1073)
T 1a9x_A 128 DRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGS----GGGIAYNREEFEEICARGLDLSP-- 200 (1073)
T ss_dssp SHHHHHHHHHHTTCCCCSEEEESSHHHHHHHHHHHC-SSEEEEETTCCTTT----TCEEESSHHHHHHHHHHHHHHCT--
T ss_pred CHHHHHHHHHHCCcCCCCEEEECCHHHHHHHHHHcC-CCEEEEECCCCCCC----ceEEeCCHHHHHHHHHHHHhhCC--
Confidence 356789999999999999999999999999999999 99999997656655 88899999999999988765321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceE---EEEeCCCCCCCHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLY---KTIIDPLIGLTKNNI 160 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~---~~~i~p~~gl~~~~a 160 (974)
...++|||+++..+|+.+.+..|+.. ..+.+++ +|.+. |..++ ...+.|...++
T Consensus 201 ---------~~~vlvEe~I~G~~E~~v~v~~d~~g-~~v~~~~------~e~~d---p~~v~~g~s~~~~Pa~~l~---- 257 (1073)
T 1a9x_A 201 ---------TKELLIDESLIGWKEYEMEVVRDKND-NCIIVCS------IENFD---AMGIHTGDSITVAPAQTLT---- 257 (1073)
T ss_dssp ---------TSCEEEEECCTTSEEEEEEEEECTTC-CEEEEEE------EEESS---CTTSCGGGSCEEESCCSCC----
T ss_pred ---------CCcEEEEEccCCCeEEEEEEEEeCCC-CEEEEEE------Eeccc---CCccccCcEEEEecCCCCC----
Confidence 24689999999779999999999643 3433332 33221 11110 12333432233
Q ss_pred HHHHHHCCCChhhHHHHHHHHHHHHhhcccC-CeeEEeeceeEEcc-CCcEEEEEEE
Q psy3769 161 DNISKKISIPKNSLINFYEEIQNIYKSYWET-DSLLLEINPLVINS-KNKIISLDIK 215 (974)
Q Consensus 161 ~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~-d~~~lEINPL~v~~-~g~~~alDak 215 (974)
+...+++.+.+.++.+.+.-. +..-+| +++++ +|+++.++.-
T Consensus 258 ----------~~~~~~l~~~a~~i~~~lg~~~G~~~vd---f~~~~~~g~~~viEiN 301 (1073)
T 1a9x_A 258 ----------DKEYQIMRNASMAVLREIGVETGGSNVQ---FAVNPKNGRLIVIEMN 301 (1073)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHTCCSEEEEEE---EEECTTTCCEEEEEEE
T ss_pred ----------HHHHHHHHHHHHHHHHHcCcccCceEEE---EEEECCCCCEEEEEec
Confidence 334455566666666555433 455556 55554 4555555443
No 57
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=98.82 E-value=3.3e-08 Score=112.62 Aligned_cols=167 Identities=13% Similarity=0.109 Sum_probs=113.4
Q ss_pred HHHHHHHH-HHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEIL-RKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL-~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
-+.+|++| +++|||+|++..+++.+|+.++++++| +|+|+||....||+ ||.+++|++|+.++++++.....
T Consensus 113 K~~~~~~l~~~~gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 185 (391)
T 1kjq_A 113 REGIRRLAAEELQLPTSTYRFADSESLFREAVADIG-YPCIVKPVMSSSGK----GQTFIRSAEQLAQAWKYAQQGGR-- 185 (391)
T ss_dssp HHHHHHHHHTTSCCCBCCEEEESSHHHHHHHHHHHC-SSEEEEESCC---C----CCEEECSGGGHHHHHHHHHHHSG--
T ss_pred HHHHHHHHHHhCCCCCCCeeeeCCHHHHHHHHHhcC-CCEEEEeCCCCCCC----CeEEECCHHHHHHHHHHHHhhcc--
Confidence 46789998 899999999999999999999999999 89999996544444 89999999999999988765321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
+ .-..++||||++.+.|+.+.+..|.. + .. +....+ .... .......+.|.
T Consensus 186 ------~-~~~~~lvEe~i~~g~E~sv~~~~~~~-g-~~-~~~~~~-----~~~~---~~~~~~~~~p~----------- 236 (391)
T 1kjq_A 186 ------A-GAGRVIVEGVVKFDFEITLLTVSAVD-G-VH-FCAPVG-----HRQE---DGDYRESWQPQ----------- 236 (391)
T ss_dssp ------G-GCCCEEEEECCCCSEEEEEEEEEETT-E-EE-ECCCEE-----EEEE---TTEEEEEEECC-----------
T ss_pred ------c-CCCCEEEEEecCCCeEEEEEEEEeCC-C-eE-EccCcc-----eEEE---CCEEEEEEeCC-----------
Confidence 0 12468999999988999999988853 2 32 222111 1100 00111122231
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.+++...+++.+++.++.+.+.-.++.-+| ++++++ +++.++.-
T Consensus 237 ----~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve---~~~~~~-~~~viEiN 280 (391)
T 1kjq_A 237 ----QMSPLALERAQEIARKVVLALGGYGLFGVE---LFVCGD-EVIFSEVS 280 (391)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHCSSEEEEEE---EEEETT-EEEEEEEE
T ss_pred ----CCCHHHHHHHHHHHHHHHHHcCCeeEEEEE---EEEeCC-cEEEEEEE
Confidence 233445566677777777776655677778 677766 46665543
No 58
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=98.81 E-value=1.1e-08 Score=115.66 Aligned_cols=160 Identities=19% Similarity=0.168 Sum_probs=76.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeec-CcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHA-GGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~-ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
+.+.+|++|+++|||+|++..++ .+|+.++++++| +|+|+||.... +|+ ||.+++|++|+.++++++++.
T Consensus 92 dK~~~~~~l~~~gip~p~~~~~~-~~~~~~~~~~~~-~P~vvKp~~~~~~g~----Gv~~v~~~~el~~~~~~~~~~--- 162 (365)
T 2z04_A 92 SRIREKLFLKKHGFPVPEFLVIK-RDEIIDALKSFK-LPVVIKAEKLGYDGK----GQYRIKKLEDANQVVKNHDKE--- 162 (365)
T ss_dssp CHHHHHHHHHTTTCCCCCEEEC----------------CEEEECC-----------------------------------
T ss_pred CHHHHHHHHHHcCCCCCCEEEEc-HHHHHHHHHhcC-CCEEEEEcCCCcCCC----CeEEECCHHHHHHHHHHhccC---
Confidence 56789999999999999999999 899988888998 89999996555 555 899999999999888776421
Q ss_pred ccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHH
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDN 162 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~ 162 (974)
..++||||++.++|+.+.+..|++ +.++.+.. .|.... .......+.|.. +
T Consensus 163 -----------~~~lvEe~i~~g~e~sv~~~~d~~-G~~~~~~~------~~~~~~---~~~~~~~~~p~~-~------- 213 (365)
T 2z04_A 163 -----------ESFIIEEFVKFEAEISCIGVRDRE-GKTYFYPQ------PFNKHE---EGILIYNYVPYA-K------- 213 (365)
T ss_dssp -------------CEEEECCCCSEEEEEEEEECTT-CCEEECCE------EEEEEE---TTEEEEEEEEEE-C-------
T ss_pred -----------CCEEEEccCCCCEEEEEEEEECCC-CCEEEECC------EEEEEe---CCEeEEEECCHh-H-------
Confidence 468999999988999999999864 33322211 121111 111112233310 1
Q ss_pred HHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 163 ISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 163 ~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.+++.+++.++.+.+.-.+..-+| ++++++|+++.++.-
T Consensus 214 -----------~~~~~~~~~~~~~~lg~~G~~~vd---~~~~~~g~~~~iEiN 252 (365)
T 2z04_A 214 -----------LKEAEEITKRLMELLDIVGVFTVE---FFLLKDGRVLINEFA 252 (365)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCEEEEEE---EEECTTSCEEEEEEE
T ss_pred -----------HHHHHHHHHHHHHHcCCEEEEEEE---EEEeCCCcEEEEEec
Confidence 234555566666655444566777 677777777666554
No 59
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=98.81 E-value=4.7e-08 Score=112.74 Aligned_cols=100 Identities=20% Similarity=0.337 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++....
T Consensus 102 dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 174 (424)
T 2yw2_A 102 SKAFAKTFMKKYGIPTARYEVFTDFEKAKEYVEKVG-APIVVKADGLAAGK----GAVVCETVEKAIETLDRFLNKKI-- 174 (424)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHC-SSEEEEESSCCTTC----SEEEESSHHHHHHHHHHHHTSCT--
T ss_pred CHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHHcC-CcEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHhhhh--
Confidence 356789999999999999999999999999999999 89999996555555 89999999999999988865321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEec
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDR 116 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr 116 (974)
.|..-..++|||+++ +.|+.+.+..|.
T Consensus 175 -----~g~~~~~~lvEe~i~-g~E~sv~~~~~G 201 (424)
T 2yw2_A 175 -----FGKSSERVVIEEFLE-GEEASYIVMING 201 (424)
T ss_dssp -----TGGGGSSEEEEECCC-SEEEEEEEEEET
T ss_pred -----ccCCCCeEEEEECCC-CcEEEEEEEEcC
Confidence 122224689999999 899999998874
No 60
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=98.80 E-value=3.6e-08 Score=113.70 Aligned_cols=101 Identities=23% Similarity=0.308 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+|+.++++++| +|+|+||....+|| ||.+++|++|+.+++++++....
T Consensus 102 dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~-~P~vvKp~~~~~g~----Gv~~v~~~~el~~~~~~~~~~~~-- 174 (422)
T 2xcl_A 102 SKQFAKDLMKKYDIPTAEYETFTSFDEAKAYVQEKG-APIVIKADGLAAGK----GVTVAMTEEEAIACLHDFLEDEK-- 174 (422)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEESCHHHHHHHHHHHC-SSEEEEESSCGGGT----CEEEESSHHHHHHHHHHHHTSCT--
T ss_pred CHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHhcC-CCEEEEeCCCCCCC----cEEEECCHHHHHHHHHHHHhhhh--
Confidence 456789999999999999999999999999999999 89999996555555 89999999999999988865321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV 117 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~ 117 (974)
.|..-..++||||++ +.|+.+.+..|.+
T Consensus 175 -----~g~~~~~~lvEe~i~-g~E~sv~~~~dG~ 202 (422)
T 2xcl_A 175 -----FGDASASVVIEEYLS-GEEFSLMAFVKGE 202 (422)
T ss_dssp -----TGGGGSSEEEEECCC-SEEEEEEEEEETT
T ss_pred -----ccCCCCeEEEEECCc-CcEEEEEEEEcCC
Confidence 111224689999999 8999999988753
No 61
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=98.80 E-value=3.9e-08 Score=107.81 Aligned_cols=169 Identities=10% Similarity=0.102 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHH--------HHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHH
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIK--------AAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKK 75 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~--------~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~ 75 (974)
+.+..|++|+++|||+|++..+++. |+.+ ++++++ +|+|+||....+|+ ||.++++++|+.+++++
T Consensus 96 dK~~~~~~l~~~gi~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~-~p~vvKP~~g~~~~----gv~~v~~~~el~~~~~~ 169 (306)
T 1iow_A 96 DKLRSKLLWQGAGLPVAPWVALTRA-EFEKGLSDKQLAEISALG-LPVIVKPSREGSSV----GMSKVVAENALQDALRL 169 (306)
T ss_dssp CHHHHHHHHHHTTCCBCCEEEEEHH-HHHHCCCTHHHHHHHTTC-SSEEEEETTCCTTT----TCEEESSGGGHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCeEEEchh-hhhccchhhhhhHHhccC-CCEEEEeCCCCCCC----CEEEeCCHHHHHHHHHH
Confidence 4567899999999999999999888 7766 677888 89999996544444 89999999999998887
Q ss_pred HHhccccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCC
Q psy3769 76 ILGMQLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGL 155 (974)
Q Consensus 76 ~l~~~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl 155 (974)
+... -..++|||+++ ++|+.+.+..+ ... +++-....++.. +.-...+... ...+.|
T Consensus 170 ~~~~-------------~~~~lvee~i~-g~e~~v~~~~g-~~~-~~~~~~~~~~~~-~~~~~~~~g~--~~~~~p---- 226 (306)
T 1iow_A 170 AFQH-------------DEEVLIEKWLS-GPEFTVAILGE-EIL-PSIRIQPSGTFY-DYEAKFLSDE--TQYFCP---- 226 (306)
T ss_dssp HTTT-------------CSEEEEEECCC-CCEEEEEEETT-EEC-CCEEEECSSSSS-CHHHHHTCSC--CEEESS----
T ss_pred HHhh-------------CCCEEEEeCcC-CEEEEEEEECC-Ccc-ceEEEEeCCCeE-chhheecCCC--eeEEcC----
Confidence 6421 14789999999 89999998833 221 111111111110 0000000000 011122
Q ss_pred CHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 156 TKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 156 ~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
..+++...+++.+++.++.+.+.-.+..-+| ++++++|+++.++.-
T Consensus 227 -----------~~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD---~~~~~~g~~~~iEiN 272 (306)
T 1iow_A 227 -----------AGLEASQEANLQALVLKAWTTLGCKGWGRID---VMLDSDGQFYLLEAN 272 (306)
T ss_dssp -----------CCCCHHHHHHHHHHHHHHHHHHTCCSEEEEE---EEECTTSCEEEEEEE
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHHcCCceEEEEE---EEEcCCCCEEEEEec
Confidence 1234455667777888888877666677888 788888877766653
No 62
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=98.80 E-value=5.4e-08 Score=113.62 Aligned_cols=173 Identities=14% Similarity=0.228 Sum_probs=116.1
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++....
T Consensus 120 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~ 194 (461)
T 2dzd_A 120 DKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHG-YPIIIKAALGGGGR----GMRIVRSKSEVKEAFERAKSEAK 194 (461)
T ss_dssp SHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHC-SCEEEEESTTCSSS----SEEEECCGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcC-CcEEEEeCCCCCCC----CEEEeCCHHHHHHHHHHHHHHHH
Confidence 45678999999999999997 7899999999999999 89999996555555 89999999999999888765311
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
.. .+ -..++|||+++..+|+.+.+..|.. +..+.++. . .+.....+ .......|...
T Consensus 195 --~~---~~--~~~~lvEe~i~g~~e~~v~v~~~~~-G~~~~~~~-~----~~~~~~~~---~~~~~~~P~~~------- 251 (461)
T 2dzd_A 195 --AA---FG--SDEVYVEKLIENPKHIEVQILGDYE-GNIVHLYE-R----DCSVQRRH---QKVVEVAPSVS------- 251 (461)
T ss_dssp --HH---TS--CCCEEEEECCCSCEEEEEEEEECTT-CCEEEEEE-E----EEEEEETT---EEEEEEESCTT-------
T ss_pred --hh---cC--CCcEEEEECCCCCeEEEEEEEEcCC-CCEEEEEe-c----cccccccc---cceEEECCccc-------
Confidence 00 11 1468999999977999999999863 33332221 0 01111111 12233445222
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
+++...+++.+...++.+.+.-....-+| +++++ |+++.++.-
T Consensus 252 -------l~~~~~~~i~~~a~~~~~~lg~~g~~~ve---~~~~~-~~~~viEiN 294 (461)
T 2dzd_A 252 -------LSDELRQRICEAAVQLMRSVGYVNAGTVE---FLVSG-DEFYFIEVN 294 (461)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEEET-TEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHHHHHHHcCCCcceEEE---EEEeC-CCEEEEEEE
Confidence 33445556667777777766544555677 67766 556665553
No 63
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=98.79 E-value=1.2e-07 Score=108.45 Aligned_cols=168 Identities=17% Similarity=0.288 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+|+.++++++| ||+|+||....||+ ||.+++|++|+.++++++.....
T Consensus 109 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 181 (403)
T 4dim_A 109 DKYKMKEAFKKYNVNTARHFVVRNENELKNALENLK-LPVIVKATDLQGSK----GIYIAKKEEEAIDGFNETMNLTK-- 181 (403)
T ss_dssp CHHHHHHHHHHHTCCCCCEECCCSHHHHHHHHHTSC-SSEEEECSCC---------CEEESSHHHHHHHHHHHHHHCS--
T ss_pred CHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHhcCC-CCEEEEECCCCCCC----CEEEECCHHHHHHHHHHHHhcCc--
Confidence 346789999999999999999999999999999999 99999996555555 89999999999999988765421
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
-..++||||++ +.|+.+.+..+. +...++.. .+-. ....+ ..+..-...|.
T Consensus 182 ---------~~~~lvEe~i~-g~e~sv~~~~~~--g~~~~~~~-~~~~--~~~~~---~~~~~~~~~p~----------- 232 (403)
T 4dim_A 182 ---------RDYCIVEEFIE-GYEFGAQAFVYK--NDVLFVMP-HGDE--TYMSH---TAVPVGHYVPL----------- 232 (403)
T ss_dssp ---------SSCCEEEECCC-SEEEEEEEEEET--TEEEEEEE-EEEE--EEESS---SEEEEEEEESC-----------
T ss_pred ---------CCcEEEEEccC-CcEEEEEEEEEC--CEEEEEEE-ecce--eccCC---CCcceeEEeCC-----------
Confidence 13689999999 689999988652 33433221 1110 00001 01111122231
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCC-eeEEeeceeEEccCCcEEEEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETD-SLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d-~~~lEINPL~v~~~g~~~alDak 215 (974)
.+++...+++.+.+.++.+.+.-.+ +.-+| ++++ +|+++.++.-
T Consensus 233 ----~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve---~~~~-~~~~~~iEiN 277 (403)
T 4dim_A 233 ----DVKDDIIEKTKTEVKKAIKALGLNNCAVNVD---MILK-DNEVYIIELT 277 (403)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHTCCSEEEEEE---EEEE-TTEEEEEEEE
T ss_pred ----CCCHHHHHHHHHHHHHHHHHcCCCCCcEEEE---EEEE-CCcEEEEEEc
Confidence 2345556677778888887776555 66778 6666 5557766553
No 64
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=98.78 E-value=4.1e-08 Score=113.61 Aligned_cols=170 Identities=17% Similarity=0.208 Sum_probs=107.8
Q ss_pred HHHHHHHH-HHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEIL-RKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL-~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
-+.+|++| +++|||+|++..+++.+|+.++++++| +|+|+||....||+ ||.+++|++|+.+++++++....
T Consensus 121 K~~~k~~l~~~~gip~p~~~~~~~~~~~~~~~~~~g-~P~vvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 193 (433)
T 2dwc_A 121 RERLRETLVKEAKVPTSRYMYATTLDELYEACEKIG-YPCHTKAIMSSSGK----GSYFVKGPEDIPKAWEEAKTKAR-- 193 (433)
T ss_dssp HHHHHHHHHHTSCCCCCCEEEESSHHHHHHHHHHHC-SSEEEEECCC----------EEECSGGGHHHHHHC--------
T ss_pred HHHHHHHHHHhcCCCCCCeeEeCCHHHHHHHHHhcC-CCEEEEECCCcCCC----CeEEECCHHHHHHHHHHHHhhcc--
Confidence 45688998 899999999999999999999999999 89999996545444 89999999999998887654311
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc-CCcee-eeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV-QQNII-FMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~-~~~pv-ii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
+ .-..++||||++.+.|+.+.+..|+. .+.++ .+.... +.... ..+ ....+.|.
T Consensus 194 ------~-~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~-----~~~~~-~~~--~~~~~~p~--------- 249 (433)
T 2dwc_A 194 ------G-SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPV-----GHYQI-DGD--YHASWQPA--------- 249 (433)
T ss_dssp ----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCE-----EEEES-SSS--EEEEEESC---------
T ss_pred ------c-CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEeccc-----ceEEE-cCE--EEEEEcCC---------
Confidence 0 12468999999988999999888740 23332 222211 11100 011 11122231
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.++++..+++.+++.++.+.+.-.++.-+| ++++++ +++.++.-
T Consensus 250 ------~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve---~~~~~~-~~~viEiN 293 (433)
T 2dwc_A 250 ------EISEKAEREVYRIAKRITDVLGGLGIFGVE---MFVKGD-KVWANEVS 293 (433)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHCSSEECEEE---EEEETT-EEEEEEEE
T ss_pred ------CCCHHHHHHHHHHHHHHHHHcCCeeEEEEE---EEEeCC-cEEEEEEe
Confidence 233445566677777777776655677778 677766 46665543
No 65
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=98.77 E-value=1e-07 Score=111.78 Aligned_cols=176 Identities=13% Similarity=0.106 Sum_probs=114.6
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+.+|++|+++|||+|++..+++.+|+.++++++| ||+|+||....||+ ||.+++|++|++++++++.......
T Consensus 139 DK~~~k~~l~~~GIpvp~~~~v~s~ee~~~~~~~lg-~PvVVKP~~g~gg~----Gv~iv~~~eel~~a~~~~~~~~~~~ 213 (474)
T 3vmm_A 139 DKNKMRDAFNKAGVKSIKNKRVTTLEDFRAALEEIG-TPLILKPTYLASSI----GVTLITDTETAEDEFNRVNDYLKSI 213 (474)
T ss_dssp CHHHHHHHHHHTTSCCCCEEEECSHHHHHHHHHHSC-SSEEEEESSCCTTT----TCEEECCTTSHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHcCCCCCCeEEECCHHHHHHHHHHcC-CCEEEEECCCCcCc----eEEEECCHHHHHHHHHHHHHHHhhc
Confidence 567899999999999999999999999999999999 99999996555555 8889999999999988876532200
Q ss_pred cccCCCCCceeEEEEEEEeccce-----------eEEE-EEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCC
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKK-----------ELYI-SFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDP 151 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~-----------E~yl-gi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p 151 (974)
...... ..-..++||||++..+ |+.+ ++..|... .++.+........ .. +. ....|
T Consensus 214 ~~~~a~-~~~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~-~~v~i~~~~~~~~---~~----~~---~~~~P 281 (474)
T 3vmm_A 214 NVPKAV-TFEAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEY-FPIAIHDKTPQIG---FT----ET---SHITP 281 (474)
T ss_dssp CCCTTC-CCSCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEE-EEEEEEEECCCBT---TB----CC---EEEES
T ss_pred cccccc-cCCCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeE-EEEEEEeeccCCC---cc----ce---EEEEC
Confidence 000000 1125799999998432 2555 35555432 2222221110000 10 11 22333
Q ss_pred CCCCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeE-EeeceeEEccCCcEEEEEE
Q psy3769 152 LIGLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLL-LEINPLVINSKNKIISLDI 214 (974)
Q Consensus 152 ~~gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~-lEINPL~v~~~g~~~alDa 214 (974)
. . ++....+++.+...++.+.+.-.+... +| ++++++|+++.++.
T Consensus 282 a-~--------------l~~~~~~~l~~~a~~~~~alG~~g~~~~ve---f~~~~dg~~~~iEv 327 (474)
T 3vmm_A 282 S-I--------------LDEEAKKKIVEAAKKANEGLGLQNCATHTE---IKLMKNREPGLIES 327 (474)
T ss_dssp C-C--------------CCHHHHHHHHHHHHHHHHHHTCCSEEEEEE---EEEEGGGEEEEEEE
T ss_pred C-C--------------CCHHHHHHHHHHHHHHHHHcCCCCccEEEE---EEEcCCCCEEEEEE
Confidence 2 1 344455667777788888776666553 88 67877887887774
No 66
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=98.76 E-value=3.5e-08 Score=111.35 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=111.0
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeee-cCcccccCeEEEeCC--HHHHHHHHHHHHhccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIH-AGGRGKCGGIKLAQS--LEQVEKYTKKILGMQL 81 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~-~ggrgk~GGV~l~~s--~ee~~~a~~~~l~~~~ 81 (974)
-+..|++|+++|||||++..+++.+|+.++++++| ||+||||.-. .+|| |+.+++| ++|+.+++ .
T Consensus 80 K~~~k~~l~~~GIptp~~~~v~~~~e~~~~~~~~G-~P~VvKp~~~G~~Gk----Gv~~v~~~~~~el~~a~-------~ 147 (355)
T 3eth_A 80 RLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLG-ELAIVKRRTGGYDGR----GQWRLRANETEQLPAEC-------Y 147 (355)
T ss_dssp HHHHHHHHHHTTCCBCCEEEECCGGGHHHHHHHHC-SEEEEEESSSCCTTT----TEEEEETTCGGGSCGGG-------T
T ss_pred HHHHHHHHHHCccCCCCEEEECCHHHHHHHHHHcC-CCEEEEecCCCCCCC----eEEEEcCCCHHHHHHHh-------h
Confidence 45689999999999999999999999999999999 9999999532 2333 8999999 98887632 1
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
+ .++||+|++.++|+.+.+.+|.. +.. ..+. -.|... .+.+....+.|.
T Consensus 148 --------~----~vivEe~I~~~~Eisv~v~~~~~-G~~-~~~p-----~~e~~~---~~g~~~~~~~pa--------- 196 (355)
T 3eth_A 148 --------G----ECIVEQGINFSGEVSLVGARGFD-GST-VFYP-----LTHNLH---QDGILRTSVAFP--------- 196 (355)
T ss_dssp --------T----TEEEEECCCCSEEEEEEEEECTT-SCE-EECC-----CEEEEE---ETTEEEEEEECS---------
T ss_pred --------C----CEEEEEccCCCcEEEEEEEEcCC-CCE-EEEC-----CEEEEe---eCCeEEEEECCC---------
Confidence 1 37999999989999999998864 322 2221 112221 122333333441
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.++++..+++.+++.++.+.+.-.++.-+| ++++++ ++++.+.-
T Consensus 197 ------~l~~~~~~~~~~~a~~i~~aLg~~G~~~vE---f~~~~~-~~~v~Ein 240 (355)
T 3eth_A 197 ------QANAQQQARAEEMLSAIMQELGYVGVMAME---CFVTPQ-GLLINELA 240 (355)
T ss_dssp ------SCCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEETT-EEEEEEEE
T ss_pred ------CCCHHHHHHHHHHHHHHHHHCCCeeEEEEE---EEEECC-cEEEEEee
Confidence 234455667778888888877666778888 777754 47766654
No 67
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=98.76 E-value=1.2e-08 Score=114.50 Aligned_cols=166 Identities=12% Similarity=0.152 Sum_probs=112.8
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+++.. +++| +|+||||....+++ ||.++++++|+.+++++++..
T Consensus 132 dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~--~~~~-~PvvvKP~~~~~s~----Gv~~v~~~~el~~a~~~~~~~---- 200 (343)
T 1e4e_A 132 DKSLTYIVAKNAGIATPAFWVINKDDRPVA--ATFT-YPVFVKPARSGSSF----GVKKVNSADELDYAIESARQY---- 200 (343)
T ss_dssp SHHHHHHHHHHTTCBCCCEEEECTTCCCCG--GGSC-SCEEEEESSCCTTT----TCEEECSGGGHHHHHHHHTTT----
T ss_pred CHHHHHHHHHHCCCCcCCEEEEechhhhhh--hccC-CCEEEEeCCCCCCC----CEEEeCCHHHHHHHHHHHHhc----
Confidence 456789999999999999999988776532 6788 89999996544333 799999999999988876432
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceee------c-cccCC---cceEEEEeCCCC
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEI------I-SKNSP---ELLYKTIIDPLI 153 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~------~-~d~~p---~~i~~~~i~p~~ 153 (974)
-..++|||+++ ++|+.+.+..|+.. +.++.. ..+.. . ++.+| ..- +..+.|
T Consensus 201 ---------~~~~lvEe~I~-G~E~~v~vl~~~~~--~~~~~~----~ei~~~~~~~~~~~k~~~~~~~g~-~~~~~p-- 261 (343)
T 1e4e_A 201 ---------DSKILIEQAVS-GCEVGCAVLGNSAA--LVVGEV----DQIRLQYGIFRIHQEVEPEKGSEN-AVITVP-- 261 (343)
T ss_dssp ---------CSSEEEEECCC-SEEEEEEEEEETTC--CEECCC----EEEEESSSCCCGGGSSSGGGCCSS-EEECSS--
T ss_pred ---------CCcEEEEeCcC-CeEEEEEEEeCCCC--eEEeee----EEEeeCCCccCHhhcccccCCCCC-eeEEeC--
Confidence 13689999998 79999999988632 211111 01110 0 00010 000 112222
Q ss_pred CCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 154 GLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 154 gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
..++++..+++.++..++++.+.-.+..-+| ++++++|+++.++.-
T Consensus 262 -------------~~l~~~~~~~i~~~a~~~~~alg~~G~~~vD---~~~~~~g~~~viEiN 307 (343)
T 1e4e_A 262 -------------ADLSAEERGRIQETVKKIYKTLGCRGLARVD---MFLQDNGRIVLNEVN 307 (343)
T ss_dssp -------------CSSCHHHHHHHHHHHHHHHHHTTCEEEEEEE---EEECTTCCEEEEEEE
T ss_pred -------------CCCCHHHHHHHHHHHHHHHHHcCCceEEEEE---EEEeCCCCEEEEEee
Confidence 1245556778888888888887666677888 788888887776653
No 68
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=98.74 E-value=1.3e-07 Score=110.04 Aligned_cols=99 Identities=23% Similarity=0.241 Sum_probs=79.1
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCc-EEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNS-WVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~P-vVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
.+..|++|+++|||+|++..+++.+|+.++++++| +| +|+||....||| ||.+++|++|+.+++++++....
T Consensus 129 K~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~g-~P~vvvKp~~~~gg~----Gv~~v~~~~el~~~~~~~~~~~~-- 201 (452)
T 2qk4_A 129 KRFAKEFMDRHGIPTAQWKAFTKPEEACSFILSAD-FPALVVKASGLAAGK----GVIVAKSKEEACKAVQEIMQEKA-- 201 (452)
T ss_dssp HHHHHHHHHHTTCCBCCEEEESSHHHHHHHHHHCS-SCEEEEEESBC---C----CEEECSSHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHCCCCCCCeEEECCHHHHHHHHHhCC-CCeEEEEeCCCCCCC----CEEEeCCHHHHHHHHHHHHhhhh--
Confidence 46789999999999999999999999999999999 89 999996555555 89999999999999988765321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEec
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDR 116 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr 116 (974)
.|..-..++||||++ +.|+.+.+..|.
T Consensus 202 -----~g~~~~~~lvEe~i~-G~E~sv~~~~dG 228 (452)
T 2qk4_A 202 -----FGAAGETIVIEELLD-GEEVSCLCFTDG 228 (452)
T ss_dssp ----------CCEEEEECCC-SEEEEEEEEECS
T ss_pred -----ccCCCCeEEEEECCC-CCeEEEEEEECC
Confidence 121224689999999 899999988764
No 69
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=98.72 E-value=6.1e-08 Score=111.91 Aligned_cols=175 Identities=13% Similarity=0.153 Sum_probs=109.8
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITS 84 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~ 84 (974)
-+..|++|+++|||+|++..+++.+|+.+ +++| ||+||||.-..||| ||.+++|++|++++++++......
T Consensus 113 K~~~k~~l~~~gip~p~~~~~~~~~~~~~--~~~g-~P~vvKp~~g~gs~----Gv~~v~~~~el~~a~~~~~~~~~~-- 183 (425)
T 3vot_A 113 KNKTRSILQQNGLNTPVFHEFHTLADLEN--RKLS-YPLVVKPVNGFSSQ----GVVRVDDRKELEEAVRKVEAVNQR-- 183 (425)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSGGGGTT--CCCC-SSEEEEESCC---------CEEECSHHHHHHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHCCCCCCceeccCcHHHHHH--hhcC-CcEEEEECCCCCCC----CceEechHHHHHHHHHHHHhhhhh--
Confidence 46789999999999999999999988753 5788 99999996544444 899999999999999887543210
Q ss_pred ccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHHH
Q psy3769 85 QTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNIS 164 (974)
Q Consensus 85 q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~~ 164 (974)
........-..++|||+++ +.|+.+.+..+. +.+.++.- .+......|.......+.|.
T Consensus 184 ~~~~~~~~~~~~lvEe~i~-G~e~sv~~~~~~--g~~~~~~~------~~~~~~~~~~~~~~~~~~Pa------------ 242 (425)
T 3vot_A 184 DLNRFVHGKTGIVAEQFID-GPEFAIETLSIQ--GNVHVLSI------GYKGNSKGPFFEEGVYIAPA------------ 242 (425)
T ss_dssp SHHHHHTTCCCEEEEECCC-SCEEEEEEEEET--TEEEEEEE------EEEECCCCSBCCCCEEEESC------------
T ss_pred hhhhhccCCCcEEEEEEec-CcEEEEEEEEeC--CcEEEEeE------EEEeccCCCccccceEeecc------------
Confidence 0000011224689999998 789998877763 33322211 01111111100001122231
Q ss_pred HHCCCChhhHHHHHHHHHHHHhhccc-CCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 165 KKISIPKNSLINFYEEIQNIYKSYWE-TDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 165 ~~lg~~~~~~~~l~~~l~~L~~l~~~-~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.++++..+++.+.+.++.+.+.- +++.-+| +++++||+++.++.-
T Consensus 243 ---~l~~~~~~~i~~~~~~~~~alg~~~G~~~ve---~~~~~dG~~~~iEiN 288 (425)
T 3vot_A 243 ---QLKEETRLAIVKEVTGAVSALGIHQGPAHTE---LRLDKDGTPYVIEVG 288 (425)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEE---EEECTTCCEEEEEEE
T ss_pred ---cCCHHHHHHHHHHHHHHHHHcCCCcceEEEE---EEEEeCCcEEEEEEe
Confidence 23445566677777777777653 3577788 888899887776553
No 70
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=98.72 E-value=1.7e-07 Score=108.95 Aligned_cols=172 Identities=16% Similarity=0.170 Sum_probs=113.7
Q ss_pred HHHHHHHHHHcCCCCCCce--eeCCHHHH-HHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 5 EYQGKEILRKFNVTIPKGI--LCMNVDEA-IKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~--~~~s~eea-~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
.+.+|++|+++|||+|++. .+++.+|+ .++++++| +|+|+||....||+ ||.+++|++|+.+++++++....
T Consensus 116 K~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~ 190 (449)
T 2w70_A 116 KVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIG-YPVIIKASGGGGGR----GMRVVRGDAELAQSISMTRAEAK 190 (449)
T ss_dssp HHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHC-SSEEEEETTCCTTT----TCEEECSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhC-CcEEEEECCCCCCC----CEEEeCCHHHHHHHHHHHHHHHH
Confidence 4678999999999999997 88999999 88999999 89999996555555 89999999999999888764311
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
+. .+ -..++|||+++..+|+.+.+..|.. +..+.+.. .+ ......+ .......|...
T Consensus 191 --~~---~~--~~~~lvEe~i~g~~e~~v~~~~~~~-G~~~~~~~----~~-~~~~~~~---~~~~~~~p~~~------- 247 (449)
T 2w70_A 191 --AA---FS--NDMVYMEKYLENPRHVEIQVLADGQ-GNAIYLAE----RD-CSMQRRH---QKVVEEAPAPG------- 247 (449)
T ss_dssp --HH---HS--CCCEEEEECCSSCEEEEEEEEECTT-SCEEEEEE----EE-EEEEETT---EEEEEEESCTT-------
T ss_pred --hh---cC--CCcEEEEeccCCCeEEEEEEEEcCC-CCEEEEec----ee-cccccCC---cceeeeCCccc-------
Confidence 00 01 1368999999977999999999853 33432221 00 0111111 12233344211
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
++++..+++.+...++.+.+.-.++.-+| +++++ |+++.++.-
T Consensus 248 -------l~~~~~~~i~~~a~~~~~~lg~~G~~~ve---~~~~~-~~~~viEiN 290 (449)
T 2w70_A 248 -------ITPELRRYIGERCAKACVDIGYRGAGTFE---FLFEN-GEFYFIEMN 290 (449)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEET-TEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHHHHHHHcCCCceEEEE---EEEEC-CCEEEEEEE
Confidence 33444556666666666665444566677 67766 556665543
No 71
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=98.72 E-value=2.7e-08 Score=121.41 Aligned_cols=173 Identities=18% Similarity=0.259 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| ||+|+||..-.||| ||++++|++|+.++++++.....
T Consensus 115 dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~ig-yPvVvKp~~ggggk----Gv~iv~~~~el~~a~~~~~~ea~ 189 (681)
T 3n6r_A 115 DKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIG-YPVMIKASAGGGGK----GMRIAWNDQEAREGFQSSKNEAA 189 (681)
T ss_dssp SHHHHHHHHHTTTCCCCCC-------------------------------------------------------------
T ss_pred CHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcC-CcEEEEECCCCCCC----CEEEECCHHHHHHHHHHHHHHHH
Confidence 46789999999999999985 7889999999999999 99999996545555 89999999999999887754322
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
....-..++||||++..+|+.+.+..|.. +..+.+.. .+. .+...+ .++ +...|...
T Consensus 190 -------~~fg~~~vlvEe~I~g~rei~V~v~~d~~-G~vv~l~~----rd~-s~qr~~-~k~--~e~~Pa~~------- 246 (681)
T 3n6r_A 190 -------NSFGDDRIFIEKFVTQPRHIEIQVLCDSH-GNGIYLGE----REC-SIQRRN-QKV--VEEAPSPF------- 246 (681)
T ss_dssp --------------------CCSCEEEEEEEECCSS-SCCEEEEE----EEC-CCEETT-EEC--EEEESCSS-------
T ss_pred -------HhCCCCcEEEEeccCCCcEEEEEEEEeCC-CCEEEEee----eec-ceeccC-ccE--EEecCCCC-------
Confidence 11112579999999977999999999974 43433321 000 111222 122 23334222
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
++++..+++.+.+.++.+.+.-.++.-+| ++++++|+++.++.
T Consensus 247 -------l~~~~~~~l~~~a~~~~~alg~~G~~~vE---f~~d~dg~~~~lEi 289 (681)
T 3n6r_A 247 -------LDEATRRAMGEQAVALAKAVGYASAGTVE---FIVDGQKNFYFLEM 289 (681)
T ss_dssp -------CCHHHHHHHHHHHHHHHHTTTCCSEEEEE---EEECTTSCCCCCEE
T ss_pred -------CCHHHHHHHHHHHHHHHHHcCCCceEEEE---EEEeCCCCEEEEec
Confidence 34455667777888888776555666778 67777776655443
No 72
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=98.71 E-value=1.5e-07 Score=108.38 Aligned_cols=96 Identities=24% Similarity=0.345 Sum_probs=80.8
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.+|+.++++++| +|+|+||....||| ||.+++|++|+.+++++++...
T Consensus 101 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~-~P~vvKp~~~~gg~----Gv~~v~~~~el~~~~~~~~~~~--- 172 (417)
T 2ip4_A 101 SKAFAKGLMERYGIPTARYRVFREPLEALAYLEEVG-VPVVVKDSGLAAGK----GVTVAFDLHQAKQAVANILNRA--- 172 (417)
T ss_dssp CHHHHHHHHHHTCCCBCCEEEESSHHHHHHHHHHHC-SSEEEECTTSCSST----TCEEESCHHHHHHHHHHHTTSS---
T ss_pred CHHHHHHHHHHcCCCCCCeeeeCCHHHHHHHHHHcC-CCEEEEECCCCCCC----CEEEeCCHHHHHHHHHHHHhhc---
Confidence 456789999999999999999999999999999999 89999996544444 8999999999999988876221
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEec
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDR 116 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr 116 (974)
.+ ..++||||++ +.|+.+.+..|.
T Consensus 173 -----~~---~~~lvEe~i~-g~E~sv~~~~~G 196 (417)
T 2ip4_A 173 -----EG---GEVVVEEYLE-GEEATVLALTDG 196 (417)
T ss_dssp -----SC---CCEEEEECCC-SCEEEEEEEESS
T ss_pred -----cC---CeEEEEECcc-CcEEEEEEEEeC
Confidence 11 4689999999 889999988764
No 73
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=98.66 E-value=1e-07 Score=108.32 Aligned_cols=158 Identities=20% Similarity=0.295 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeec-CcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHA-GGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~-ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
.+..|++|+++|||+|++..+++.+| +++++| +|+|+||.... +|+ ||.+++|++|+.++++
T Consensus 101 K~~~~~~l~~~gip~p~~~~~~~~~~---~~~~~~-~P~vvKp~~~~y~g~----Gv~~v~~~~el~~~~~--------- 163 (380)
T 3ax6_A 101 KFVQKEFLKKNGIPVPEYKLVKDLES---DVREFG-FPVVQKARKGGYDGR----GVFIIKNEKDLENAIK--------- 163 (380)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSHHH---HHHTTC-SSEEEEESCCC---------EEEECSGGGGGGCCC---------
T ss_pred HHHHHHHHHHcCCCCCCeEEeCCHHH---HHHhcC-CCEEEEecCCCCCCC----CeEEECCHHHHHHHhc---------
Confidence 46789999999999999999999887 567788 89999996544 444 8999999988765322
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
..++|||+++.+.|+.+.+..|++ +....+.. .|..-+ .+.......+.|.
T Consensus 164 ----------~~~lvEe~i~~g~e~sv~~~~~~~-G~~~~~~~------~~~~~~-~~~~~~~~~~~p~----------- 214 (380)
T 3ax6_A 164 ----------GETYLEEFVEIEKELAVMVARNEK-GEIACYPV------VEMYFD-EDANICDTVIAPA----------- 214 (380)
T ss_dssp ----------SSEEEEECCCEEEEEEEEEEECSS-CCEEEEEE------EEEC---------CEEEESC-----------
T ss_pred ----------CCEEEEeccCCCeeEEEEEEECCC-CCEEEECC------eeeeec-ccCCeeEEEECCC-----------
Confidence 358999999988999999999853 32322111 122100 0111111122231
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.++++..+++.+++.++.+.+.-.++.-+| ++++++|+++.++.-
T Consensus 215 ----~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd---~~~~~~g~~~viEiN 259 (380)
T 3ax6_A 215 ----RIEEKYSKIAREIATSVVEALEGVGIFGIE---MFLTKQGEILVNEIA 259 (380)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHTCCEEEEEE---EEEETTSCEEEEEEE
T ss_pred ----CCCHHHHHHHHHHHHHHHHHCCCeEEEEEE---EEEeCCCcEEEEEec
Confidence 234455566777777777776555677788 788888877766654
No 74
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.64 E-value=6.6e-08 Score=124.13 Aligned_cols=178 Identities=13% Similarity=0.135 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| ||+|+||....||| ||++++|++|+.++++++.....
T Consensus 134 DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~ig-yPvVVKp~~g~GG~----Gv~iv~s~eEL~~a~~~~~~~a~ 208 (1165)
T 2qf7_A 134 NKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIG-YPVMLKASWGGGGR----GMRVIRSEADLAKEVTEAKREAM 208 (1165)
T ss_dssp SHHHHHHHHHHTTCCBC---------------------------------------------------------------
T ss_pred CHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHHHHH
Confidence 35778999999999999998 6889999999999999 99999997666666 89999999999998887754321
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
....-..++||||++.++|+.+.+..|+. +.++.++.. .....+.+ .......|...+
T Consensus 209 -------~~fg~~~vlVEefI~gg~EisV~vl~D~~-G~vv~l~~r-----~~s~~r~~---~~~~e~~Pa~~l------ 266 (1165)
T 2qf7_A 209 -------AAFGKDEVYLEKLVERARHVESQILGDTH-GNVVHLFER-----DCSVQRRN---QKVVERAPAPYL------ 266 (1165)
T ss_dssp ------------------CCCSSEEEEEEEEEECTT-SCEEEEEEE-----EEEEEETT---EEEEEEESCTTC------
T ss_pred -------hhcCCCcEEEEEeccCCcEEEEEEEEcCC-CcEEEEEee-----cccceecc---cceEEecccccC------
Confidence 00112568999999988999999999964 334333220 01111112 222344553223
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEc-cCCcEEEEEEEEeee
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVIN-SKNKIISLDIKFNFD 219 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~-~~g~~~alDaki~ld 219 (974)
++...+++.+.+.++.+.+.-.++.-+| ++++ ++|+++.++.--++.
T Consensus 267 --------~~~~~~~i~~~a~~i~~alg~~G~~~vE---f~vd~~dg~~~~iEiNpR~~ 314 (1165)
T 2qf7_A 267 --------SEAQRQELAAYSLKIAGATNYIGAGTVE---YLMDADTGKFYFIEVNPRIQ 314 (1165)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEEETTTTEEEEEEEECSCC
T ss_pred --------CHHHHHHHHHHHHHHHHHcCCCcceeEE---EEEECCCCCEEEEEEEcCCC
Confidence 3344555666666666655434455566 5666 556666665544443
No 75
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.63 E-value=2.9e-07 Score=118.06 Aligned_cols=169 Identities=14% Similarity=0.264 Sum_probs=104.9
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITS 84 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~ 84 (974)
.+..|++|+++|||+|++..+++.+|+.++++++| ||+||||....||| ||.+++|++|+.++++++...
T Consensus 675 K~~~~~ll~~~GIp~P~~~~~~s~eea~~~~~~ig-~PvvVKP~~~~gG~----Gv~iv~~~~el~~~~~~a~~~----- 744 (1073)
T 1a9x_A 675 RERFQHAVERLKLKQPANATVTAIEMAVEKAKEIG-YPLVVRASYVLGGR----AMEIVYDEADLRRYFQTAVSV----- 744 (1073)
T ss_dssp HHHHHHHHHHHTCCCCCEEECCSHHHHHHHHHHHC-SSEEEEC-----------CEEEECSHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHcCcCCCCceEECCHHHHHHHHHHcC-CCEEEEECCCCCCC----CeEEECCHHHHHHHHHHHHhh-----
Confidence 45678999999999999999999999999999999 99999997766777 899999999999988775321
Q ss_pred ccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHHH
Q psy3769 85 QTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNIS 164 (974)
Q Consensus 85 q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~~ 164 (974)
..-..++||+|++..+|+.+.+..|.. ..++... .. ++|...-.+.+... .++| .
T Consensus 745 ------~~~~~vlvEefI~g~~E~~V~~l~d~~--~v~~~~i-~e--~~~~~g~~~gd~~~--~~P~-~----------- 799 (1073)
T 1a9x_A 745 ------SNDAPVLLDHFLDDAVEVDVDAICDGE--MVLIGGI-ME--HIEQAGVHSGDSAC--SLPA-Y----------- 799 (1073)
T ss_dssp ------------EEEBCCTTCEEEEEEEEECSS--CEEEEEE-EE--ESSCTTSCGGGCCE--EESC-S-----------
T ss_pred ------CCCCcEEEEEccCCCcEEEEEEEEECC--eEEEEee-EE--EEeccCCccCCceE--EecC-C-----------
Confidence 112468999999977799999999863 2322111 00 11110000011111 1222 1
Q ss_pred HHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 165 KKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 165 ~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
.+++...+++.+...++.+.+.-.++.-+| ++++ +|+++.++.-
T Consensus 800 ---~l~~~~~~~i~~~a~~i~~aLg~~G~~~vd---f~v~-~~~~~viEvN 843 (1073)
T 1a9x_A 800 ---TLSQEIQDVMRQQVQKLAFELQVRGLMNVQ---FAVK-NNEVYLIEVN 843 (1073)
T ss_dssp ---SCCHHHHHHHHHHHHHHHHHTTCCEEEEEE---EEEC-SSCEEEEEEE
T ss_pred ---CCCHHHHHHHHHHHHHHHHHcCCcceEEEE---EEEE-CCeEEEEEEE
Confidence 134445566777777777766555565666 5554 4446655543
No 76
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=98.63 E-value=4.4e-08 Score=111.11 Aligned_cols=171 Identities=15% Similarity=0.164 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHH--HHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVD--EAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~e--ea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++..+++.+ ++.+ ++++| +|+||||....+++ ||.+++|++|+.+++++++..
T Consensus 149 DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~-~~~lg-~PvvVKP~~g~ss~----Gv~~v~~~~el~~a~~~~~~~-- 220 (367)
T 2pvp_A 149 NKYLTKLYAKDLGIKTLDYVLLNEKNRANALD-LMNFN-FPFIVKPSNAGSSL----GVNVVKEEKELIYALDSAFEY-- 220 (367)
T ss_dssp SHHHHHHHHHHHTCBCCCCEEECTTTGGGHHH-HCCSC-SCEEEEESSCCTTT----TCEEESSTTSHHHHHHHHTTT--
T ss_pred CHHHHHHHHHHCCcCCCCEEEEeCCchHHHHH-HhccC-CCEEEEECCCCCCC----CEEEECCHHHHHHHHHHHHhc--
Confidence 35678999999999999999998877 6766 77888 89999995433333 888999999999988876431
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEE-EEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELY-ISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNI 160 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~y-lgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a 160 (974)
-..++|||+++..+|+. +.+.+| +.+++.. +|...+ ..++.+.-.+..+-+
T Consensus 221 -----------~~~vlVEe~I~G~~E~svi~v~v~---g~~~~~~-------~ei~~~---~~~~d~~~ky~~g~~---- 272 (367)
T 2pvp_A 221 -----------SKEVLIEPFIQGVKEYNLAGCKIK---KDFCFSY-------IEEPNK---QEFLDFKQKYLDFSR---- 272 (367)
T ss_dssp -----------CSCEEEEECCTTCEEEEEEEEEET---TEEEEEE-------EEETTT---TEEECCCCSSCCSCC----
T ss_pred -----------CCcEEEEeCCCCCceeeEEEEEEC---CEEEEEE-------EEEecC---CceEcccccccCCCe----
Confidence 13689999999439944 333333 2232211 121111 011111000000000
Q ss_pred HHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 161 DNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 161 ~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
....+..++++..+++.++..++++.+...+..-+| ++++ +|+++.++.-
T Consensus 273 -~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vD---f~~~-~g~~~vlEiN 322 (367)
T 2pvp_A 273 -NKAPKASLSNALEEQLKENFKKLYSDLFDGAIIRCD---FFVI-ENEVYLNEIN 322 (367)
T ss_dssp -CSCCCCCCCHHHHHHHHHHHHHHHTTTSTTCCEEEE---EEEE-TTEEEEEEEE
T ss_pred -eEEecCCCCHHHHHHHHHHHHHHHHHcCCCCEEEEE---EEEE-CCeEEEEEEe
Confidence 001112356667788899999999988766777888 6777 7767766653
No 77
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=98.63 E-value=2.5e-08 Score=121.53 Aligned_cols=173 Identities=13% Similarity=0.215 Sum_probs=112.8
Q ss_pred CHHHHHHHHHHcCCCCCCcee--eCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGIL--CMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~--~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++.. +.+.+|+.++++++| ||+|+||..-.||| ||++++|++|+.++++++.....
T Consensus 141 DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~ig-yPvvvKp~~G~Gg~----Gv~iv~~~~el~~a~~~~~~ea~ 215 (675)
T 3u9t_A 141 SKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIG-YPVLLKAAAGGGGK----GMKVVEREAELAEALSSAQREAK 215 (675)
T ss_dssp SHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSC-SSBCCBCCC----------CCCBCCTTTHHHHHSCCCC---
T ss_pred hHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCC-CcEEEEECCCCCCc----cEEEECCHHHHHHHHHHHHHHHH
Confidence 457899999999999999876 789999999999999 99999996544555 89999999999988766533211
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
....-..++||||++..+|+.+.+..|. .+..+.++. .+. .+...+ +++. ...|..
T Consensus 216 -------~~fg~~~vlvEeyI~g~reiev~v~~d~-~G~vv~l~~----rd~-s~qr~~-qk~i--e~~Pa~-------- 271 (675)
T 3u9t_A 216 -------AAFGDARMLVEKYLLKPRHVEIQVFADR-HGHCLYLNE----RDC-SIQRRH-QKVV--EEAPAP-------- 271 (675)
T ss_dssp ------------CCCBCCBCCSSCBCEEEEEEECS-SSCEEEEEE----EEC-CCBSSS-SBCE--EEESCS--------
T ss_pred -------HhcCCCcEEEEeecCCCcEEEEEEEEcC-CCCEEEEec----ccc-ceeecc-ceEE--EECCCC--------
Confidence 0011246899999997799999999996 343433321 000 112222 2222 233422
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
.+++...+++.+.+.++.+.+.-.++.-+| ++++++|+++.++.
T Consensus 272 ------~l~~~~~~~l~~~a~~~~~alg~~G~~~vE---f~~~~dG~~~~iEi 315 (675)
T 3u9t_A 272 ------GLGAELRRAMGEAAVRAAQAIGYVGAGTVE---FLLDERGQFFFMEM 315 (675)
T ss_dssp ------SCCHHHHHHHHHHHHHHHHHTTCCSEEEEE---CCBCTTSCBCBCEE
T ss_pred ------CCCHHHHHHHHHHHHHHHHHcCCccceEEE---EEEcCCCCEEEEec
Confidence 234455667777788887776555677788 67777776554443
No 78
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=98.61 E-value=2.5e-07 Score=102.86 Aligned_cols=165 Identities=10% Similarity=0.095 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+.+..|++|+++|||+|++..+++.++. +. ++| +|+||||....+++ ||.++++++|+.+++++.+..
T Consensus 118 dK~~~k~~l~~~Gip~p~~~~~~~~~~~--~~-~~g-~PvvvKP~~g~~s~----Gv~~v~~~~el~~a~~~~~~~---- 185 (322)
T 2fb9_A 118 DKDLSKRVLAQAGVPVVPWVAVRKGEPP--VV-PFD-PPFFVKPANTGSSV----GISRVERFQDLEAALALAFRY---- 185 (322)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEEETTSCC--CC-CSC-SCEEEEETTCCTTT----TCEEESSHHHHHHHHHHHTTT----
T ss_pred CHHHHHHHHHHCCCCCCCEEEEECchhh--hh-ccC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHhc----
Confidence 3567899999999999999998877652 22 678 89999995433333 899999999999988876432
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCccee-eccccCCcceE---EEEeCCCCCCCHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIE-IISKNSPELLY---KTIIDPLIGLTKNN 159 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE-~~~d~~p~~i~---~~~i~p~~gl~~~~ 159 (974)
-..++|||+++..+|+.+++..|+.. .. +.. |-+... .+-+.. .+.. +..+.|
T Consensus 186 ---------~~~vlvEe~I~G~~E~~v~vl~~~~~-~~-~~~---~ei~~~~~~~~~~-~k~~~g~~~~~~P-------- 242 (322)
T 2fb9_A 186 ---------DEKAVVEKALSPVRELEVGVLGNVFG-EA-SPV---GEVRYEAPFYDYE-TKYTPGRAELLIP-------- 242 (322)
T ss_dssp ---------CSEEEEEECCSSCEEEEEEEESSSSC-EE-EEE---EEEEEECCEEETT-TEEECCEEEEESS--------
T ss_pred ---------CCeEEEEeCCCCCeeEEEEEEeCCCc-eE-eee---EEEeeCCCccCHH-HcccCCCeEEEeC--------
Confidence 14799999999449999999988631 11 111 111000 000000 0110 112233
Q ss_pred HHHHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 160 IDNISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 160 a~~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
..++++..+++.++..++++.+...+..-+| ++++ +|+++.++.
T Consensus 243 -------a~l~~~~~~~i~~~a~~~~~alg~~G~~~vD---~~~~-~g~~~vlEi 286 (322)
T 2fb9_A 243 -------APLDPGTQETVQELALKAYKVLGVRGMARVD---FFLA-EGELYLNEL 286 (322)
T ss_dssp -------CCCCTTHHHHHHHHHHHHHHHHTCCSEEEEE---EEEE-TTEEEEEEE
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHhCCceEEEEE---EEEE-CCcEEEEEE
Confidence 1345566778888888998888766788888 7777 777776654
No 79
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=98.59 E-value=4.6e-08 Score=120.09 Aligned_cols=117 Identities=21% Similarity=0.203 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHH-HHcCCCcEEEEeeeecCcccccCeEEEeC---CHHHHHHHHHHHHhc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAA-KKIGGNSWVIKAQIHAGGRGKCGGIKLAQ---SLEQVEKYTKKILGM 79 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a-~~ig~~PvVvK~qi~~ggrgk~GGV~l~~---s~ee~~~a~~~~l~~ 79 (974)
+...+|++|+++|||||++.++++.+++.+++ +.+| +|+||||.. |+.|+ ||.+++ |++++.+++++++..
T Consensus 484 DK~~tk~lL~~~GIPvP~~~~~~~~~ea~~~~~~~~g-~PvVVKP~~--G~~G~--GV~iv~~~~s~eel~~a~~~~~~~ 558 (750)
T 3ln6_A 484 NKVVTKKILDEKHFPTPFGDEFTDRKEALNYFSQIQD-KPIVVKPKS--TNFGL--GISIFKTSANLASYEKAIDIAFTE 558 (750)
T ss_dssp TSHHHHHHHHHTTCCCCCCCCEETTTTHHHHHHHSSS-SCEEEEETT--CCSSS--SCEEESSCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCEEEECCHHHHHHHHHHhcC-CcEEEEeCC--CCCCC--CEEEEeCCCCHHHHHHHHHHHHhh
Confidence 34678999999999999999999999998777 6678 899999953 33433 899987 999999999887642
Q ss_pred cccccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCcee---eeccCCCCcceeecccc
Q psy3769 80 QLITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNII---FMGSNKGGMDIEIISKN 139 (974)
Q Consensus 80 ~~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pv---ii~s~~GGv~iE~~~d~ 139 (974)
. ..++||||++ ++|+.+.+..|+.....- ..+++.|+..||++-+.
T Consensus 559 ~-------------~~vlVEefI~-G~E~~v~Vvgg~vvaa~~r~p~~v~GdG~~tI~eLI~~ 607 (750)
T 3ln6_A 559 D-------------SAILVEEYIE-GTEYRFFVLEGDCIAVLLRVAANVVGDGIHTISQLVKL 607 (750)
T ss_dssp C-------------SEEEEEECCC-SEEEEEEEETTEEEEEEEEECCEEECCTTCCHHHHHHH
T ss_pred C-------------CcEEEEeccC-CCEEEEEEECCEEEEEEEEecceEecCCccCHHHHHHh
Confidence 1 4789999999 799999998775432110 12344788888876554
No 80
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=98.58 E-value=1.6e-07 Score=120.78 Aligned_cols=176 Identities=15% Similarity=0.210 Sum_probs=60.6
Q ss_pred HHHHHHHHHHcCCCCCCc-eeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 5 EYQGKEILRKFNVTIPKG-ILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~-~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
.+.+|++|+++|||+|++ .++++.+|+.++++++| ||+|+||....||| ||++++|++|+.++++++.....
T Consensus 145 K~~ak~ll~~aGIPvpp~~~~v~s~eea~~~a~~iG-yPvVVKP~~GgGGk----GV~iv~s~eEL~~a~~~~~~~a~-- 217 (1236)
T 3va7_A 145 KHSAREIAERAKVPLVPGSGLIKDAKEAKEVAKKLE-YPVMVKSTAGGGGI----GLQKVDSEDDIERVFETVQHQGK-- 217 (1236)
T ss_dssp TTHHHHHHHHTTCCCCC---------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCCCCCeeEecCCHHHHHHHHHHcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHHHHH--
Confidence 457899999999999885 67899999999999999 99999997655555 89999999999999888754321
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
....-..++||||++..+|+.+.+..|.. +.. +..+ ..+.. +.+.+ .++ ....|...+
T Consensus 218 -----~~~~~~~vlVEeyI~G~rEisV~vl~Dg~-g~v-v~l~---~rd~s-~qr~~-~k~--~e~~Pa~~l-------- 275 (1236)
T 3va7_A 218 -----SYFGDAGVFMERFVNNARHVEIQMMGDGF-GKA-IAIG---ERDCS-LQRRN-QKV--IEETPAPNL-------- 275 (1236)
T ss_dssp --------------------CCEEEEEEEEEESS-SCE-EEEE---EEEEE-EEETT-EEE--EEEESCSSC--------
T ss_pred -----hccCCCcEEEeeccCCCeEEEEEEEecCC-ceE-EEEe---eeeee-eeecC-cce--EEEcCCCCC--------
Confidence 01112469999999977999999999964 333 2322 11111 11112 122 233443223
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccC-CcEEEEEEEEee
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSK-NKIISLDIKFNF 218 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~-g~~~alDaki~l 218 (974)
+++..+++.+.+.++.+.+.-.++.-+| ++++++ |+++.++.--++
T Consensus 276 ------~~~~~~~l~~~a~~~~~alg~~G~~~VE---fivd~d~g~~y~iEINpRl 322 (1236)
T 3va7_A 276 ------PEATRAKMRAASERLGSLLKYKCAGTVE---FIYDEQRDEFYFLEVNARL 322 (1236)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTCEEEEEEE---EEEETTTTEEEEEEEECSC
T ss_pred ------CHHHHHHHHHHHHHHHHHcCCcceEEEE---EEEECCCCcEEEEEEECCC
Confidence 3445566667777776665444555566 555553 556665554333
No 81
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=98.41 E-value=2.4e-07 Score=118.72 Aligned_cols=173 Identities=16% Similarity=0.224 Sum_probs=106.9
Q ss_pred CHHHHHHHHHHcCCCCCCce--eeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGI--LCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~--~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+.+|++|+++|||+|++. .+++.+|+.++++++| ||+|+||..-.||| ||++++|++|+.++++++.....
T Consensus 118 DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iG-yPvVVKP~~GgGg~----Gv~vv~s~eeL~~a~~~a~~~a~ 192 (1150)
T 3hbl_A 118 DKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAG-FPLMIKATSGGGGK----GMRIVREESELEDAFHRAKSEAE 192 (1150)
T ss_dssp SHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTC-SSEEEECCC-----------CEECCSSSCTHHHHSSSSSCC
T ss_pred CHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHHHHH
Confidence 45788999999999999998 7899999999999999 99999996545555 88999999999998876543211
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHH
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNID 161 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~ 161 (974)
....-..++||||++..+|+.+.+..|.. +..+.++. .+ ..+...+ .......|...++
T Consensus 193 -------~~fg~~~vlVEeyI~G~reieV~vl~d~~-G~vv~l~e----r~-~s~qr~~---~k~~e~~Pa~~l~----- 251 (1150)
T 3hbl_A 193 -------KSFGNSEVYIERYIDNPKHIEVQVIGDEH-GNIVHLFE----RD-CSVQRRH---QKVVEVAPSVGLS----- 251 (1150)
T ss_dssp -------------CBEEECCCSSCEEEEEEEEECSS-SCEEEEEE----EE-EEEESSS---CEEEEESSCSSCC-----
T ss_pred -------hhcCCCcEEEEEccCCCcEEEEEEEEeCC-CCEEEEEe----ec-cceeccC---ceeEEecCCCCCC-----
Confidence 00112468999999977999999999963 43433221 01 0111112 1224555633343
Q ss_pred HHHHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEEEE
Q psy3769 162 NISKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLDIK 215 (974)
Q Consensus 162 ~~~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alDak 215 (974)
+...+++.+.+.++.+.+.-.++.-+| ++++++ +++.++.-
T Consensus 252 ---------~~~~~~l~~~a~~~~~alG~~G~~~vE---flvd~d-~~y~iEIN 292 (1150)
T 3hbl_A 252 ---------PTLRQRICDAAIQLMENIKYVNAGTVE---FLVSGD-EFFFIEVN 292 (1150)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTTCCEEEEEE---EEEETT-EEEEEEEE
T ss_pred ---------HHHHHHHHHHHHHHHHHcCCCceEEEE---EEEECC-eEEEEEEe
Confidence 344455666666666655433444455 344444 35554443
No 82
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=98.36 E-value=2.9e-06 Score=95.69 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=60.6
Q ss_pred HHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccccccc
Q psy3769 7 QGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITSQT 86 (974)
Q Consensus 7 ~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~q~ 86 (974)
-.|++|+++|||||++ +++++|+ + +|+||||.-..+|| ||.+++|++|+.+++++++....
T Consensus 127 ~~k~~l~~~GIptp~~--~~~~~e~-------~-~PvVVK~~~~a~Gk----Gv~v~~s~ee~~~a~~~~~~~~~----- 187 (361)
T 2r7k_A 127 LEGKLLREAGLRVPKK--YESPEDI-------D-GTVIVKFPGARGGR----GYFIASSTEEFYKKAEDLKKRGI----- 187 (361)
T ss_dssp HHHHHHHHTTCCCCCE--ESSGGGC-------C-SCEEEECSCCCC-------EEEESSHHHHHHHHHHHHHTTS-----
T ss_pred HHHHHHHHcCcCCCCE--eCCHHHc-------C-CCEEEeeCCCCCCC----CEEEECCHHHHHHHHHHHHhccc-----
Confidence 4689999999999974 5676654 5 89999997666666 99999999999999999875432
Q ss_pred CCCCCc-eeEEEEEEEeccceeEE
Q psy3769 87 NQEGEN-VFCVLIEEYIDIKKELY 109 (974)
Q Consensus 87 ~~~g~~-~~~vLVee~v~~~~E~y 109 (974)
.+.. ...++||||++ +.|+.
T Consensus 188 --~~~~~~~~viIEEfl~-G~e~s 208 (361)
T 2r7k_A 188 --LTDEDIANAHIEEYVV-GTNFC 208 (361)
T ss_dssp --CCHHHHHHCEEEECCC-SEEEE
T ss_pred --cccCCCCeEEEEeccc-eEEee
Confidence 1111 13589999998 77875
No 83
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=98.30 E-value=8.6e-07 Score=108.70 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=75.9
Q ss_pred HHHHHHHHHcCCCCCCceeeCCHHHHHHHH-HHcCCCcEEEEeeeecCcccccCeEEEe----CCHHHHHHHHHHHHhcc
Q psy3769 6 YQGKEILRKFNVTIPKGILCMNVDEAIKAA-KKIGGNSWVIKAQIHAGGRGKCGGIKLA----QSLEQVEKYTKKILGMQ 80 (974)
Q Consensus 6 ~~ak~lL~~~GIpvp~~~~~~s~eea~~~a-~~ig~~PvVvK~qi~~ggrgk~GGV~l~----~s~ee~~~a~~~~l~~~ 80 (974)
..+|++|+++|||||++.++++.+++.+.+ +++| +|+||||....+|+ ||.++ +|++++.++++.++...
T Consensus 491 ~~tk~lL~~~GIPvP~~~~~~~~~ea~~~~~~~~g-~PvVVKP~~g~~G~----GV~iv~~~v~~~eel~~al~~a~~~~ 565 (757)
T 3ln7_A 491 VVTKKVLQKAGFNVPQSVEFTSLEKAVASYALFEN-RAVVIKPKSTNYGL----GITIFQQGVQNREDFAKALEIAFRED 565 (757)
T ss_dssp HHHHHHHHHHTCCCCCEEEESCHHHHHHGGGGSSS-SCEEEEESSCSTTT----TCEECSSCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCcCCCCEEEECCHHHHHHHHHHhcC-CCEEEEeCCCCCCC----CeEEecCCCCCHHHHHHHHHHHHhcC
Confidence 467999999999999999999999997776 6788 89999996545444 89988 89999999888765321
Q ss_pred ccccccCCCCCceeEEEEEEEeccceeEEEEEEEec
Q psy3769 81 LITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDR 116 (974)
Q Consensus 81 ~~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr 116 (974)
..++||||++ ++|+.+.+..|+
T Consensus 566 -------------~~vlVEefI~-G~Ei~v~Vlggk 587 (757)
T 3ln7_A 566 -------------KEVMVEDYLV-GTEYRFFVLGDE 587 (757)
T ss_dssp -------------SSEEEEECCC-SEEEEEEEETTE
T ss_pred -------------CcEEEEEcCC-CcEEEEEEECCE
Confidence 3589999998 799999887553
No 84
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=98.24 E-value=1e-05 Score=89.63 Aligned_cols=94 Identities=13% Similarity=0.155 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHH--HHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAA--KKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a--~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~ 81 (974)
+.+..|++|+++|||+|++.. +.+++.+.. ++++ +|+|+||....||+ ||.+++|++|+.+++++
T Consensus 114 dK~~~~~~l~~~gip~p~~~~--~~~~~~~~~~~~~~~-~P~vvKp~~g~g~~----gv~~v~~~~el~~~~~~------ 180 (331)
T 2pn1_A 114 DKYTMYEYCLRQGIAHARTYA--TMASFEEALAAGEVQ-LPVFVKPRNGSASI----EVRRVETVEEVEQLFSK------ 180 (331)
T ss_dssp BHHHHHHHHHHHTCCCCCEES--SHHHHHHHHHTTSSC-SCEEEEESBC-------------------------------
T ss_pred CHHHHHHHHHHcCCCCCcEEe--cHHHhhhhhhcccCC-CCEEEEeCCCCCCC----CeEEeCCHHHHHHHHHh------
Confidence 356789999999999999865 567776665 4688 89999996544443 89999999998876443
Q ss_pred cccccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCcee
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNII 122 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pv 122 (974)
...++|||+++ +.|+.+.+..|...+.++
T Consensus 181 -----------~~~~lvee~i~-G~e~~v~~~~d~~~G~~~ 209 (331)
T 2pn1_A 181 -----------NTDLIVQELLV-GQELGVDAYVDLISGKVT 209 (331)
T ss_dssp -------------CEEEEECCC-SEEEEEEEEECTTTCCEE
T ss_pred -----------CCCeEEEecCC-CcEEEEEEEEecCCCeEE
Confidence 13689999999 599999999982234443
No 85
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=98.20 E-value=6.1e-07 Score=96.72 Aligned_cols=96 Identities=19% Similarity=0.252 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHH--Hhccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKI--LGMQL 81 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~--l~~~~ 81 (974)
+.+..|++|+++|||+|++..+++.+++.++++++| +|+|+||....+|+ ||.++++++++.++++++ ++..
T Consensus 88 dK~~~~~~l~~~gi~~p~~~~~~~~~~~~~~~~~~~-~p~vvKp~~g~~~~----gv~~v~~~~el~~~~~~~~~~~~~- 161 (280)
T 1uc8_A 88 DKWATSVALAKAGLPQPKTALATDREEALRLMEAFG-YPVVLKPVIGSWGR----LLAXXXXXXXXXXXXXXKEVLGGF- 161 (280)
T ss_dssp BHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHC-SSEEEECSBCCBCS----HHHHHHHHHC------------CT-
T ss_pred CHHHHHHHHHHcCcCCCCeEeeCCHHHHHHHHHHhC-CCEEEEECCCCCcc----cceecccccccchhhhhHhhhccc-
Confidence 356789999999999999999999999999999998 89999996544433 888899999988877664 2110
Q ss_pred cccccCCCCCceeEEEEEEEecc-ceeEEEEEEEe
Q psy3769 82 ITSQTNQEGENVFCVLIEEYIDI-KKELYISFMTD 115 (974)
Q Consensus 82 ~t~q~~~~g~~~~~vLVee~v~~-~~E~ylgi~~D 115 (974)
.-..++|||+++. +.|+.+.+..+
T Consensus 162 ----------~~~~~lvqe~i~~~~~e~~v~v~~~ 186 (280)
T 1uc8_A 162 ----------QHQLFYIQEYVEKPGRDIRVFVVGE 186 (280)
T ss_dssp ----------TTTCEEEEECCCCSSCCEEEEEETT
T ss_pred ----------CCCcEEEEeccCCCCceEEEEEECC
Confidence 1246899999986 78888877643
No 86
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=98.19 E-value=1.3e-05 Score=88.63 Aligned_cols=174 Identities=19% Similarity=0.276 Sum_probs=101.6
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITS 84 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~ 84 (974)
.+..|++|+++|||+|++ +++++ +++ +|+|+||....||+ ||.+++|++|+.++++++.....
T Consensus 101 K~~~~~~l~~~gip~p~~--~~~~~-------~l~-~P~vvKP~~g~~s~----Gv~~v~~~~el~~~~~~~~~~~~--- 163 (334)
T 2r85_A 101 RNLERKWLKKAGIRVPEV--YEDPD-------DIE-KPVIVKPHGAKGGK----GYFLAKDPEDFWRKAEKFLGIKR--- 163 (334)
T ss_dssp HHHHHHHHHHTTCCCCCB--CSCGG-------GCC-SCEEEEECC----T----TCEEESSHHHHHHHHHHHHCCCS---
T ss_pred HHHHHHHHHHcCCCCCCc--cCChH-------HcC-CCEEEEeCCCCCCC----CEEEECCHHHHHHHHHHHHhhcc---
Confidence 456789999999999998 56654 366 89999996544444 89999999999998887754310
Q ss_pred ccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeecc------CCCCcce---e-eccc-cCCcceEEEEeCCCC
Q psy3769 85 QTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGS------NKGGMDI---E-IISK-NSPELLYKTIIDPLI 153 (974)
Q Consensus 85 q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s------~~GGv~i---E-~~~d-~~p~~i~~~~i~p~~ 153 (974)
. .....++|||+++ +.|+.+.+..+...+.+-.+.. ..+|+.- + .+.. ..|.....-.. |
T Consensus 164 ----~-~~~~~~lvee~i~-G~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-p-- 234 (334)
T 2r85_A 164 ----K-EDLKNIQIQEYVL-GVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQLEFDMDITYTVIGNI-P-- 234 (334)
T ss_dssp ----G-GGCCSEEEEECCC-CEEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGGGSCHHHHTTSCCCCCEEEEEEE-E--
T ss_pred ----c-CCCCcEEEEeccC-CceeEEEEeecCcCceeeeeeeccEEEeccCcccccccccccccccCCceeeeCCC-C--
Confidence 0 0114689999998 7887765555532211100000 0111110 0 0000 00101010001 2
Q ss_pred CCCHHHHHHHHHHCCCChhhHHHHHHHHHHHHhhc-----ccCCeeEEeeceeEEccCCcEEEEEEEEeeeC
Q psy3769 154 GLTKNNIDNISKKISIPKNSLINFYEEIQNIYKSY-----WETDSLLLEINPLVINSKNKIISLDIKFNFDT 220 (974)
Q Consensus 154 gl~~~~a~~~~~~lg~~~~~~~~l~~~l~~L~~l~-----~~~d~~~lEINPL~v~~~g~~~alDaki~ldd 220 (974)
..+++...+++.+++.++.+.+ ...+..-+| ++++++|+++.++.--++..
T Consensus 235 -------------~~l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd---~~~~~~g~~~viEiN~R~g~ 290 (334)
T 2r85_A 235 -------------IVLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLE---GVFTPDLEFVVFEISARIVA 290 (334)
T ss_dssp -------------CCCCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEE---EEECTTSCEEEEEEECSCCG
T ss_pred -------------cccCHHHHHHHHHHHHHHHHHHHhhcccccccEEEE---EEECCCCCEEEEEEeCCcCC
Confidence 1134455677788888888877 445677888 78887877887777544444
No 87
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=97.41 E-value=0.00021 Score=78.89 Aligned_cols=89 Identities=18% Similarity=0.286 Sum_probs=66.4
Q ss_pred HHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHH--cCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccc
Q psy3769 5 EYQGKEILRKFNVTIPKGILCMNVDEAIKAAKK--IGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLI 82 (974)
Q Consensus 5 E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~--ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~ 82 (974)
-+..+++|+++|||+|++.++++.+++.+++++ ++ +|+|+||..-+||. ..-||.++++++++.+ .
T Consensus 99 K~~~~~~l~~~gi~~P~~~~~~~~~~~~~~~~~~~~~-~P~vvKP~~g~g~~-~s~gv~~v~~~~~l~~---------~- 166 (324)
T 1z2n_X 99 REEINALLIKNNIPIPNSFSVKSKEEVIQLLQSKQLI-LPFIVKPENAQGTF-NAHQMKIVLEQEGIDD---------I- 166 (324)
T ss_dssp HHHHHHHHHHTTCCCSCEEEESSHHHHHHHHHTTCSC-SSEEEEESBCSSSS-GGGEEEEECSGGGGTT---------C-
T ss_pred HHHHHHHHHHCCCCCCCEEEeCCHHHHHHHHHHcCCC-CCEEEeeCCCCCCc-cceeeEEEeCHHHHhh---------c-
Confidence 456789999999999999999999999888776 45 89999996534331 1238999988776431 1
Q ss_pred ccccCCCCCceeEEEEEEEecc-ceeEEEEEEEe
Q psy3769 83 TSQTNQEGENVFCVLIEEYIDI-KKELYISFMTD 115 (974)
Q Consensus 83 t~q~~~~g~~~~~vLVee~v~~-~~E~ylgi~~D 115 (974)
-..++|||+++. +.|+.+.+.-+
T Consensus 167 ----------~~~~lvqe~i~~~g~~~~v~v~g~ 190 (324)
T 1z2n_X 167 ----------HFPCLCQHYINHNNKIVKVFCIGN 190 (324)
T ss_dssp ----------CSSEEEEECCCCTTCEEEEEEETT
T ss_pred ----------CCCEEEEEccCCCCcEEEEEEECC
Confidence 135899999975 67887776543
No 88
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=97.34 E-value=0.00022 Score=80.07 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+-+.+|++|+++|+|+|++. .+| ||+|+||.-..|++ ||++++|.+++...
T Consensus 103 dK~~~k~~l~~~gip~~~~~-------------~ig-~P~vvKp~~g~g~~----gv~~v~~~~~~~~~----------- 153 (363)
T 4ffl_A 103 DKKKSKDYFKSIGVPTPQDR-------------PSK-PPYFVKPPCESSSV----GARIIYDDKDLEGL----------- 153 (363)
T ss_dssp SHHHHHHHHHHTTCCCCCBS-------------CSS-SCEEEECSSCCTTT----TCEEEC------CC-----------
T ss_pred CHHHHHHHHHhcCCCCCCce-------------ecC-CCEEEEECCCCCCc----CeEEeccHHHhhhh-----------
Confidence 34678999999999999864 367 99999995444444 88999998775421
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEecc
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRV 117 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~ 117 (974)
.+.+++|||++ +.|+.+.+..|..
T Consensus 154 ---------~~~~~~ee~i~-g~e~sv~~~~d~~ 177 (363)
T 4ffl_A 154 ---------EPDTLVEEYVE-GEVVSLEVVGDGS 177 (363)
T ss_dssp ---------CTTCEEEECCC-SEEEEEEEEEESS
T ss_pred ---------ccchhhhhhcc-CcEEEEEEEEECC
Confidence 12468999998 7899999999863
No 89
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.33 E-value=0.00036 Score=75.81 Aligned_cols=118 Identities=15% Similarity=0.096 Sum_probs=89.3
Q ss_pred CeEEEEEccccccCcccccchhhhhcc-CCCCceEEEEecCCC---CCc---c-----ccccccccchhhhcccCCCcEE
Q psy3769 315 NLKTILVNIFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKK---NGQ---K-----FEEIPIFDTVKNAKNETGATVS 382 (974)
Q Consensus 315 ~~~~i~vni~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~---~g~---~-----i~G~~~y~sl~dip~~~~vDla 382 (974)
.+|++ +.|.+++.|..+++.+.+. +++ .+..+.++. .|. + -.|+++|.+++++.. .+|++
T Consensus 21 ~irV~---V~Ga~GrMGr~i~~~v~~~~~~e---Lvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~--~aDVv 92 (288)
T 3ijp_A 21 SMRLT---VVGANGRMGRELITAIQRRKDVE---LCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS--NTEGI 92 (288)
T ss_dssp CEEEE---ESSTTSHHHHHHHHHHHTCSSEE---EEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT--SCSEE
T ss_pred CeEEE---EECCCCHHHHHHHHHHHhCCCCE---EEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc--CCCEE
Confidence 35554 5788889999999887743 455 345544431 111 1 258899999999876 89999
Q ss_pred EEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC-Cccccc
Q psy3769 383 VIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN-CPGLIV 444 (974)
Q Consensus 383 vi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn-c~G~~~ 444 (974)
|-+++++.+.+.++.|.+.|++. |+-|.|+.+++.++|.+.|+ +.++ ++.|| ++|+..
T Consensus 93 IDFT~p~a~~~~~~~~l~~Gv~v-ViGTTG~~~e~~~~L~~aa~--~~~~-~~a~N~SiGv~l 151 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQKSLIH-IIGTTGFSKTEEAQIADFAK--YTTI-VKSGNMSLGVNL 151 (288)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEE-EECCCCCCHHHHHHHHHHHT--TSEE-EECSCCCHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHHHHhC--cCCE-EEECCCcHHHHH
Confidence 99999999999999999999984 77789998877778889888 6554 88888 667643
No 90
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.29 E-value=0.0003 Score=76.05 Aligned_cols=112 Identities=16% Similarity=0.223 Sum_probs=85.8
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCC---CCc---cc----cccccccchhhhcccCCCcEEEEEecchhH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKK---NGQ---KF----EEIPIFDTVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~---~g~---~i----~G~~~y~sl~dip~~~~vDlavi~vp~~~v 391 (974)
+.|.+++.|..+++.+.+. +++ .+..+.++. .|. ++ .|+++|.+++++.+ .+|+++-+++++.+
T Consensus 12 V~Ga~G~MG~~i~~~l~~~~~~e---Lv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~--~~DVVIDfT~p~a~ 86 (272)
T 4f3y_A 12 IAGASGRMGRMLIEAVLAAPDAT---LVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA--EADYLIDFTLPEGT 86 (272)
T ss_dssp ESSTTSHHHHHHHHHHHHCTTEE---EEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH--HCSEEEECSCHHHH
T ss_pred EECCCCHHHHHHHHHHHhCCCCE---EEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc--CCCEEEEcCCHHHH
Confidence 5788889999999888754 444 344455432 011 11 27899999999876 79999999999999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC-Ccccc
Q psy3769 392 TSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN-CPGLI 443 (974)
Q Consensus 392 ~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn-c~G~~ 443 (974)
.+.++.|.+.|++ +|+-+.|+.+++.++|.+.|+ +.++ +..|| ++|+.
T Consensus 87 ~~~~~~al~~G~~-vVigTTG~s~~~~~~L~~aa~--~~~v-v~a~N~s~Gv~ 135 (272)
T 4f3y_A 87 LVHLDAALRHDVK-LVIGTTGFSEPQKAQLRAAGE--KIAL-VFSANMSVGVN 135 (272)
T ss_dssp HHHHHHHHHHTCE-EEECCCCCCHHHHHHHHHHTT--TSEE-EECSCCCHHHH
T ss_pred HHHHHHHHHcCCC-EEEECCCCCHHHHHHHHHHhc--cCCE-EEECCCCHHHH
Confidence 9999999999988 477789998877788888888 6554 88888 55653
No 91
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=97.24 E-value=0.0023 Score=70.36 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=92.1
Q ss_pred HHHHHHHHcCC---CCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 7 QGKEILRKFNV---TIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 7 ~ak~lL~~~GI---pvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
...++|++.|+ |.|+.....+..+ ..+.+| +|+|+|+-.-+.|+ ||.+++|++++++..+.+....
T Consensus 120 ~~~~~l~~~gi~~~P~~~~~~~~~~~~---~~~~~g-~PvVvK~~~Gs~G~----GV~lv~~~~~~~~~~~~~~~~~--- 188 (309)
T 1i7n_A 120 QMVAIFKTLGGEKFPLIEQTYYPNHRE---MLTLPT-FPVVVKIGHAHSGM----GKVKVENHYDFQDIASVVALTQ--- 188 (309)
T ss_dssp HHHHHHHHHCTTTSCBCCCEEESSGGG---GSSCCC-SSEEEEESSCSTTT----TEEEECSHHHHHHHHHHHHHHT---
T ss_pred HHHHHHHhCCCCCCCCCCEEeeCChhh---hhhccC-CCEEEEeCCCCcee----CeEEECCHHHHHHHHHHHhccC---
Confidence 34567788888 8555544555443 344577 89999995444444 8999999999988776543221
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
.-+++|||++.++.+.+.+.-++. .. ++--..+|-+--.+.. . .. .++++
T Consensus 189 ----------~~~~vQefI~~g~DiRv~VvGg~v-~a--~~Rr~~~g~wrtN~~~-~--~~--e~~~l------------ 238 (309)
T 1i7n_A 189 ----------TYATAEPFIDAKYDIRVQKIGNNY-KA--YMRTSISGNWKTNTGS-A--ML--EQIAM------------ 238 (309)
T ss_dssp ----------CCEEEEECCCEEEEEEEEEETTEE-EE--EEEESSCTTTSCSCCC-S--SE--EEECC------------
T ss_pred ----------CeEEEEeecCCCceEEEEEECCEE-EE--EEEEcCCCCCeecCCc-c--ee--eecCC------------
Confidence 246899999988888888776642 11 1111111211111110 0 00 11121
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISLD 213 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~alD 213 (974)
+ ++..+++.+..+.+...|+.-+| ++.+++|+.++++
T Consensus 239 ------~----~e~~~la~~A~~a~gGldi~GVD---ll~~~~g~~~V~E 275 (309)
T 1i7n_A 239 ------S----DRYKLWVDACSEMFGGLDICAVK---AVHGKDGKDYIFE 275 (309)
T ss_dssp ------C----HHHHHHHHHHTTGGGCCSEEEEE---EEEETTSCEEEEE
T ss_pred ------C----HHHHHHHHHHHHHhCCCCEEEEE---EEEcCCCCEEEEE
Confidence 1 23566777777887678888888 7778888755443
No 92
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.99 E-value=0.00056 Score=72.71 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=82.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESE 402 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~g 402 (974)
+.|. ++.|..+.+.+.+.+.. .+..+.+.. .+-.|+++|.+++++. .+|++|-+++++.+.+.++ .+.|
T Consensus 8 ViGa-GrMG~~i~~~l~~~~~e---Lva~~d~~~--~~~~gv~v~~dl~~l~---~~DVvIDft~p~a~~~~~~--l~~g 76 (243)
T 3qy9_A 8 LIGY-GAMNQRVARLAEEKGHE---IVGVIENTP--KATTPYQQYQHIADVK---GADVAIDFSNPNLLFPLLD--EDFH 76 (243)
T ss_dssp EECC-SHHHHHHHHHHHHTTCE---EEEEECSSC--C--CCSCBCSCTTTCT---TCSEEEECSCHHHHHHHHT--SCCC
T ss_pred EECc-CHHHHHHHHHHHhCCCE---EEEEEecCc--cccCCCceeCCHHHHh---CCCEEEEeCChHHHHHHHH--HhcC
Confidence 4676 78999988888876543 566677765 4557999999999984 6899988888888888887 7888
Q ss_pred CcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC-Cccccc
Q psy3769 403 LELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN-CPGLIV 444 (974)
Q Consensus 403 v~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn-c~G~~~ 444 (974)
++. |+-+.|+.+++.++|.+.|+ +.++ ++.|| ++|+..
T Consensus 77 ~~v-VigTTG~s~e~~~~l~~aa~--~~~v-~~a~N~S~Gv~l 115 (243)
T 3qy9_A 77 LPL-VVATTGEKEKLLNKLDELSQ--NMPV-FFSANMSYGVHA 115 (243)
T ss_dssp CCE-EECCCSSHHHHHHHHHHHTT--TSEE-EECSSCCHHHHH
T ss_pred Cce-EeCCCCCCHHHHHHHHHHHh--cCCE-EEECCccHHHHH
Confidence 875 67888998777788899888 6555 77888 667543
No 93
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.93 E-value=0.0013 Score=71.18 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=84.8
Q ss_pred cCCeEEEEEccccccCcccccchhhhhc-cCCCCceEEEEecCCCC---Cc--------cccccccccchhhhcccCCCc
Q psy3769 313 QNNLKTILVNIFGITGKTGRFHTNLCLN-YGNGKKAFVAGVNPKKN---GQ--------KFEEIPIFDTVKNAKNETGAT 380 (974)
Q Consensus 313 ~~~~~~i~vni~G~~~k~G~~v~~~l~~-~g~~g~~~V~pVnP~~~---g~--------~i~G~~~y~sl~dip~~~~vD 380 (974)
+.+.|+. ++|.+++.|..+.+.+.+ .|++ .+..+.+... +. .-.|++++.+++++.. .+|
T Consensus 3 ~~~mkV~---V~Ga~G~mG~~~~~~~~~~~~~e---lva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~D 74 (273)
T 1dih_A 3 DANIRVA---IAGAGGRMGRQLIQAALALEGVQ---LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFD 74 (273)
T ss_dssp CCBEEEE---ETTTTSHHHHHHHHHHHHSTTEE---CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCS
T ss_pred CCCcEEE---EECCCCHHHHHHHHHHHhCCCCE---EEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCC
Confidence 3445554 588888999998887763 3444 2333332210 11 1236777888888765 799
Q ss_pred EEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC-Ccccc
Q psy3769 381 VSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN-CPGLI 443 (974)
Q Consensus 381 lavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn-c~G~~ 443 (974)
+++-+++|+.+.+.++.|.+.|++ +++-+.|+..++.++|.+.|+ +.+ .++.|| ++|+.
T Consensus 75 vVIDft~p~~~~~~~~~a~~~G~~-vVigTtG~~~e~~~~L~~~a~--~~~-vv~a~N~siGvn 134 (273)
T 1dih_A 75 VFIDFTRPEGTLNHLAFCRQHGKG-MVIGTTGFDEAGKQAIRDAAA--DIA-IVFAANFSVGVN 134 (273)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHTT--TSC-EEECSCCCHHHH
T ss_pred EEEEcCChHHHHHHHHHHHhCCCC-EEEECCCCCHHHHHHHHHhcC--CCC-EEEEecCcHHHH
Confidence 999888999999999999999988 467688999877788888887 655 577888 66654
No 94
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=96.93 E-value=0.0042 Score=69.22 Aligned_cols=152 Identities=12% Similarity=0.051 Sum_probs=91.0
Q ss_pred HHHHHHHHcCC---CCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 7 QGKEILRKFNV---TIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 7 ~ak~lL~~~GI---pvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
....+|++.|+ |.|+.....+..+ ..+.+| +|+|+|+-.-+.|+ ||.+++|.+++++..+.+....
T Consensus 137 ~~l~~l~~~gi~~~P~~~~t~~~~~~~---~~~~~g-~PvVvK~~~Gs~G~----GV~lve~~~~~~~~~~~~~~~~--- 205 (344)
T 2p0a_A 137 QLIKIFHSLGPEKFPLVEQTFFPNHKP---MVTAPH-FPVVVKLGHAHAGM----GKIKVENQLDFQDITSVVAMAK--- 205 (344)
T ss_dssp HHHHHHHHHCTTTSCBCCCEEESSSTT---CCCCSS-SSEEEEESSCCTTT----TEEEECSHHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHCCCCCCCCCCEEecCchhh---hhhccC-CCEEEEeCCCCcee----CeEEECCHHHHHHHHHHHhccC---
Confidence 34567788888 8555444454433 344577 89999995444444 8999999999988776543211
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
.-+++|||++.++.+.+.+.-|+.. .++--...|-+.-.+. .-...++++ +
T Consensus 206 ----------~~~~vQefI~~g~DiRv~VVGg~vv---a~~R~~~~g~wrtN~~-----~~~~e~~~l----~------- 256 (344)
T 2p0a_A 206 ----------TYATTEAFIDSKYDIRIQKIGSNYK---AYMRTSISGNWKANTG-----SAMLEQVAM----T------- 256 (344)
T ss_dssp ----------CCEEEEECCCEEEEEEEEEETTEEE---EEEEEESSSCSSTTSS-----SEEEEEECC----C-------
T ss_pred ----------CeEEEEeccCCCccEEEEEECCEEE---EEEEecCCCCCeecCC-----ceEEEeeCC----C-------
Confidence 2468999999888888887765421 1111101111111110 000012221 1
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISL 212 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~al 212 (974)
++..+++.+..+.+...|+.-+| ++.+++|+.+++
T Consensus 257 -----------~e~~~la~~Aa~a~gGldi~GVD---ll~~~~G~~~Vl 291 (344)
T 2p0a_A 257 -----------ERYRLWVDSCSEMFGGLDICAVK---AVHSKDGRDYII 291 (344)
T ss_dssp -----------HHHHHHHHHHTTGGGCCSEEEEE---EEEETTSCEEEE
T ss_pred -----------HHHHHHHHHHHHHhCCCCEEEEE---EEEcCCCCEEEE
Confidence 23566777778887678888888 777888875543
No 95
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=96.84 E-value=0.00064 Score=75.23 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=45.9
Q ss_pred HHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccccccC
Q psy3769 8 GKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITSQTN 87 (974)
Q Consensus 8 ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~q~~ 87 (974)
-|++|+++|||+|++.- ++|+ +++ +|++|||.-..||| |+.+++| +|+.++++++
T Consensus 102 ~~~~l~~~Gip~P~~~~---~ee~-----~i~-~PviVKp~~g~ggk----G~~~v~~-eel~~~~~~~----------- 156 (320)
T 2pbz_A 102 QDKALEGAGIPRVEVVE---PEDA-----KPD-ELYFVRIEGPRGGS----GHFIVEG-SELEERLSTL----------- 156 (320)
T ss_dssp HHHHHHHHTCCBCCBCC---SCCC-----CSS-CCEEEECC----------------C-EECSCCCC-------------
T ss_pred HHHHHHHCCcCCCCeeC---HhHc-----CcC-CcEEEEECCCCCCC----CEEEECh-HHHHHHHHhc-----------
Confidence 36899999999999872 3443 478 89999995444555 8999999 9886644332
Q ss_pred CCCCceeEEEEEEEeccceeEEEEEEEec
Q psy3769 88 QEGENVFCVLIEEYIDIKKELYISFMTDR 116 (974)
Q Consensus 88 ~~g~~~~~vLVee~v~~~~E~ylgi~~Dr 116 (974)
+ ..++||||++ +.|++.....+.
T Consensus 157 --~---~~~IiEEfI~-g~~~~~~~f~~~ 179 (320)
T 2pbz_A 157 --E---EPYRVERFIP-GVYLYVHFFYSP 179 (320)
T ss_dssp -------CCEEEECCC-SCEEEEEEEEET
T ss_pred --C---CCEEEEeeec-eEecceeEEecc
Confidence 0 2479999998 667654444443
No 96
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=96.84 E-value=0.0052 Score=69.87 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=90.8
Q ss_pred HHHHHHHcCC---CCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcccccc
Q psy3769 8 GKEILRKFNV---TIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLITS 84 (974)
Q Consensus 8 ak~lL~~~GI---pvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t~ 84 (974)
.-.+|++.|+ |.++.....+..+ ..+.+| +|+|+|+-.-+.|+ ||.+++|.+++++..+.+....
T Consensus 233 ~l~ll~~~gi~~iP~t~~t~~~~~~~---~i~~~g-~PvVvKp~~GS~G~----GV~lve~~~~l~~ii~~~~~~~---- 300 (422)
T 1pk8_A 233 MVRLHKKLGTEEFPLIDQTFYPNHKE---MLSSTT-YPVVVKMGHAHSGM----GKVKVDNQHDFQDIASVVALTK---- 300 (422)
T ss_dssp HHHHHHHHCTTTSCBCCCEEESSGGG---CCCCSS-SSEEEEESSCCTTT----TEEEECSHHHHHHHHHHHHHHT----
T ss_pred HHHHHHhCCCCCCCCCceEecCchhh---hhhccC-CCEEEEeCCCCcee----CeEEeCCHHHHHHHHHHHhccC----
Confidence 4566788888 8544444444433 334567 89999995444444 8999999999998776543321
Q ss_pred ccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHHH
Q psy3769 85 QTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNIS 164 (974)
Q Consensus 85 q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~~ 164 (974)
.-+++|||++.++.+.+.+.-|+. ..++--...|-+.-.+. .-...++.+ +
T Consensus 301 ---------~~~~vQEfI~~g~DIRv~VVGg~v---va~~Rr~~~g~WrtNvg-----~g~~e~i~l----t-------- 351 (422)
T 1pk8_A 301 ---------TYATAEPFIDAKYDVRVQKIGQNY---KAYMRTSVSGNWKTNTG-----SAMLEQIAM----S-------- 351 (422)
T ss_dssp ---------SCEEEEECCCEEEEEEEEEETTEE---EEEEEEESSSCSSTTSS-----CEEEEEECC----C--------
T ss_pred ---------ceEEEEeecCCCceEEEEEECCEE---EEEEEEcCCCCceeccC-----ceeeeeeCC----C--------
Confidence 246899999978888888776542 11111101121111111 000012221 1
Q ss_pred HHCCCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEccCCcEEEE
Q psy3769 165 KKISIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINSKNKIISL 212 (974)
Q Consensus 165 ~~lg~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~~g~~~al 212 (974)
++..+++.+..+.+...|+.-+| ++.+++|+.+++
T Consensus 352 ----------~e~~elA~kAaka~gGldiaGVD---lL~s~dG~~~Vl 386 (422)
T 1pk8_A 352 ----------DRYKLWVDTCSEIFGGLDICAVE---ALHGKDGRDHII 386 (422)
T ss_dssp ----------HHHHHHHHHHTTGGGCCSEEEEE---EEEETTSCEEEE
T ss_pred ----------HHHHHHHHHHHHHhCCCCEEEEE---EEEcCCCCEEEE
Confidence 23567777888888667888888 777888865543
No 97
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=96.75 E-value=0.0069 Score=66.43 Aligned_cols=135 Identities=18% Similarity=0.240 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhccccc
Q psy3769 4 YEYQGKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQLIT 83 (974)
Q Consensus 4 ~E~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~~~t 83 (974)
+-+..|++|++ |||+|++.+ ++++ +|+|+||..-.||+ ||.++++ .
T Consensus 110 dK~~~~~~l~~-Gip~p~~~~-----------~~~~-~P~vvKP~~g~gs~----Gv~~v~~--------------~--- 155 (305)
T 3df7_A 110 DKWELYKKLRG-EVQVPQTSL-----------RPLD-CKFIIKPRTACAGE----GIGFSDE--------------V--- 155 (305)
T ss_dssp SHHHHHHHHTT-TSCCCCEES-----------SCCS-SSEEEEESSCC--------CBCCSS--------------C---
T ss_pred CHHHHHHHHHh-CCCCCCEec-----------ccCC-CCEEEEeCCCCCCC----CEEEEec--------------C---
Confidence 35678999999 999999886 2577 89999995433333 7777877 0
Q ss_pred cccCCCCCceeEEEEEEEeccceeEEEEEEEeccCCceeeeccCCCCcceeeccccCCcceEEEEeCCCCCCCHHHHHHH
Q psy3769 84 SQTNQEGENVFCVLIEEYIDIKKELYISFMTDRVQQNIIFMGSNKGGMDIEIISKNSPELLYKTIIDPLIGLTKNNIDNI 163 (974)
Q Consensus 84 ~q~~~~g~~~~~vLVee~v~~~~E~ylgi~~Dr~~~~pvii~s~~GGv~iE~~~d~~p~~i~~~~i~p~~gl~~~~a~~~ 163 (974)
-..++||||++ +.|+.+.+..+.. ..++. .. +...+.. .+.-.+.|.
T Consensus 156 ---------~~~~lvEe~I~-G~e~sv~v~~g~~-~~~~~-~~-------~~~~~~~---~~~g~~~p~----------- 202 (305)
T 3df7_A 156 ---------PDGHIAQEFIE-GINLSVSLAVGED-VKCLS-VN-------EQIINNF---RYAGAVVPA----------- 202 (305)
T ss_dssp ---------CTTEEEEECCC-SEEEEEEEEESSS-EEEEE-EE-------EEEEETT---EEEEEEESC-----------
T ss_pred ---------CCCEEEEeccC-CcEEEEEEEeCCe-EEEEE-Ee-------eEeccCc---eeccccccC-----------
Confidence 13579999999 8999999987531 11211 11 1111000 011122231
Q ss_pred HHHCCCChhhHHHHHHHHHHHHhhc-ccCCeeEEeeceeEEccCCcEEEEEE
Q psy3769 164 SKKISIPKNSLINFYEEIQNIYKSY-WETDSLLLEINPLVINSKNKIISLDI 214 (974)
Q Consensus 164 ~~~lg~~~~~~~~l~~~l~~L~~l~-~~~d~~~lEINPL~v~~~g~~~alDa 214 (974)
.++++..+++.+++.++.+.+ ...+..-+| ++++ |+++.++.
T Consensus 203 ----~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD---~~~~--~~~~viEi 245 (305)
T 3df7_A 203 ----RISDEVKREVVEEAVRAVECVEGLNGYVGVD---IVYS--DQPYVIEI 245 (305)
T ss_dssp ----CCCHHHHHHHHHHHHHHHTTSTTCCEEEEEE---EEES--SSEEEEEE
T ss_pred ----CCCHHHHHHHHHHHHHHHHHcCCCcCceEEE---EEEC--CCEEEEEE
Confidence 234555677888888888877 545555666 4553 33555443
No 98
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.60 E-value=0.0045 Score=64.20 Aligned_cols=110 Identities=13% Similarity=0.288 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCCeEEEEEccccccCcccccchhhhh--ccCCCCceEE--EEecCC-CCCc-ccccccccc
Q psy3769 295 GGGATIKTITEAFKIMMQQNNLKTILVNIFGITGKTGRFHTNLCL--NYGNGKKAFV--AGVNPK-KNGQ-KFEEIPIFD 368 (974)
Q Consensus 295 GG~a~~~~v~~a~~~il~~~~~~~i~vni~G~~~k~G~~v~~~l~--~~g~~g~~~V--~pVnP~-~~g~-~i~G~~~y~ 368 (974)
|-+-+.+.+++.++.++...+.+-++ |+|. |..|..+++++. +.||+ .+ +=.||+ .-|. .+.|+|+|+
T Consensus 63 g~GY~V~~L~~~i~~~Lg~~~~~~V~--IvGa-G~lG~aLa~~~~~~~~g~~---iVg~~D~dp~~kiG~~~i~GvpV~~ 136 (212)
T 3keo_A 63 GFGYDVKKLMNFFAEILNDHSTTNVM--LVGC-GNIGRALLHYRFHDRNKMQ---ISMAFDLDSNDLVGKTTEDGIPVYG 136 (212)
T ss_dssp SSSEEHHHHHHHHHHHTTTTSCEEEE--EECC-SHHHHHHTTCCCCTTSSEE---EEEEEECTTSTTTTCBCTTCCBEEE
T ss_pred CCCEEHHHHHHHHHHHhCCCCCCEEE--EECc-CHHHHHHHHhhhcccCCeE---EEEEEeCCchhccCceeECCeEEeC
Confidence 33557788999999988755544332 4563 456666666532 34555 34 334777 6577 899999996
Q ss_pred chhhhc---ccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 369 TVKNAK---NETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 369 sl~dip---~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+++++ ++..+|.+++++|+....++.+.|.+.|+++++-++.
T Consensus 137 -~~dL~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 -ISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp -GGGHHHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred -HHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 56664 3457999999999999999999999999999877774
No 99
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=96.59 E-value=0.0017 Score=70.61 Aligned_cols=84 Identities=10% Similarity=0.072 Sum_probs=61.9
Q ss_pred HHHHHHHcCCCCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEEeC-CHHHHHHHHHHHHhcccccccc
Q psy3769 8 GKEILRKFNVTIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKLAQ-SLEQVEKYTKKILGMQLITSQT 86 (974)
Q Consensus 8 ak~lL~~~GIpvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l~~-s~ee~~~a~~~~l~~~~~t~q~ 86 (974)
.|++|+ |+|++..+++.+++.++++++| |+|+||..-.+|+ ||.+++ +.+++.++.+.+....
T Consensus 128 ~~~~l~----~~P~t~~~~~~~~~~~~~~~~~--p~vvKP~~g~~g~----Gv~~v~~~~~~l~~~~~~~~~~~------ 191 (316)
T 1gsa_A 128 TAWFSD----LTPETLVTRNKAQLKAFWEKHS--DIILKPLDGMGGA----SIFRVKEGDPNLGVIAETLTEHG------ 191 (316)
T ss_dssp GGGGTT----TSCCEEEESCHHHHHHHHHHHS--SEEEECSSCCTTT----TCEEECTTCTTHHHHHHHHTTTT------
T ss_pred HHhhhh----cCCCeEEeCCHHHHHHHHHHcC--CEEEEECCCCCcc----cEEEecCChHHHHHHHHHHHhcC------
Confidence 344554 8999999999999998888887 9999996544444 788887 8888887766542110
Q ss_pred CCCCCceeEEEEEEEecc--ceeEEEEEE
Q psy3769 87 NQEGENVFCVLIEEYIDI--KKELYISFM 113 (974)
Q Consensus 87 ~~~g~~~~~vLVee~v~~--~~E~ylgi~ 113 (974)
-..++|||+++. +.|+.+.+.
T Consensus 192 ------~~~~lvqe~i~~~~~~~~~v~~~ 214 (316)
T 1gsa_A 192 ------TRYCMAQNYLPAIKDGDKRVLVV 214 (316)
T ss_dssp ------TSCEEEEECCGGGGGCEEEEEEE
T ss_pred ------CceEEEecccCCCCCCCEEEEEE
Confidence 135899999996 577666554
No 100
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.47 E-value=0.0035 Score=66.04 Aligned_cols=106 Identities=13% Similarity=0.221 Sum_probs=77.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESE 402 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~g 402 (974)
++|. +..|..+.+++.+.|++ .+...++.. . .. .+|.|++++.+ ..+|++++++|++...+.+.+|+++|
T Consensus 5 iIG~-G~mG~~~~~~l~~~g~~---lv~v~d~~~--~-~~--~~~~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~G 74 (236)
T 2dc1_A 5 LIGY-GAIGKFLAEWLERNGFE---IAAILDVRG--E-HE--KMVRGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKAG 74 (236)
T ss_dssp EECC-SHHHHHHHHHHHHTTCE---EEEEECSSC--C-CT--TEESSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHTT
T ss_pred EECC-CHHHHHHHHHHhcCCCE---EEEEEecCc--c-hh--hhcCCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHCC
Confidence 4564 67888888888877776 456666653 1 11 17899999863 37999999999999999999999999
Q ss_pred CcEEEEEcCCCCh-HHH-HHHHHHHhcCCCCce-EEccCCcc
Q psy3769 403 LELVICITEGIPV-RDM-LILKNKMKKNNSKTL-LLGPNCPG 441 (974)
Q Consensus 403 v~~~vi~s~G~~e-~~~-~~l~~~a~~~~~gi~-viGPnc~G 441 (974)
.. +++.+.+... .+. ++|.+.++ ++|.. ++-+|+.|
T Consensus 75 ~~-vv~~~~~~~~~~~~~~~l~~~a~--~~g~~~~i~~~~~g 113 (236)
T 2dc1_A 75 ID-LIVLSTGAFADRDFLSRVREVCR--KTGRRVYIASGAIG 113 (236)
T ss_dssp CE-EEESCGGGGGSHHHHHHHHHHHH--HHCCCEEECCTTCS
T ss_pred Cc-EEEECcccCChHHHHHHHHHHHH--hcCCeEEecCcccc
Confidence 64 5777766543 333 67888888 77877 45555544
No 101
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=96.18 E-value=0.0033 Score=70.38 Aligned_cols=88 Identities=10% Similarity=0.195 Sum_probs=62.1
Q ss_pred HHHHHHHHHc-------CCCCCCceeeCC--HHHHHHHHH--HcCCCcEEEEeeeecCcccccCeEEEeCCHHHHHHHHH
Q psy3769 6 YQGKEILRKF-------NVTIPKGILCMN--VDEAIKAAK--KIGGNSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTK 74 (974)
Q Consensus 6 ~~ak~lL~~~-------GIpvp~~~~~~s--~eea~~~a~--~ig~~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~ 74 (974)
...-++|++. |||+|++.++.+ ++++.+..+ .+| +|+|+||..-+|.. +-|+.++.+.++++..
T Consensus 118 ~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~~~~~~~~~~~lg-~P~VvKP~~g~Gs~--s~~v~~v~~~~~l~~~-- 192 (346)
T 2q7d_A 118 SKSYELIRKIEAYMEDDRICSPPFMELTSLCGDDTMRLLEKNGLT-FPFICKTRVAHGTN--SHEMAIVFNQEGLNAI-- 192 (346)
T ss_dssp HHHHHHHHHHHHHHCBTTEECCCEEEECSCCCTTHHHHHHHTTCC-SSEEEECSBCSSTT--CCEEEEECSGGGTTC---
T ss_pred HHHHHHHHhhcccccCCCCCCCCEEEEeCCCHHHHHHHHHhcCCC-CCEEEEecCCCcce--eeeeEEecCHHHHHhc--
Confidence 3455667775 999999999986 355555543 467 89999995433333 4489999998776531
Q ss_pred HHHhccccccccCCCCCceeEEEEEEEecc-ceeEEEEEEEec
Q psy3769 75 KILGMQLITSQTNQEGENVFCVLIEEYIDI-KKELYISFMTDR 116 (974)
Q Consensus 75 ~~l~~~~~t~q~~~~g~~~~~vLVee~v~~-~~E~ylgi~~Dr 116 (974)
. ..++||||+++ +.|+-+.+.-|+
T Consensus 193 ---~---------------~~~lvQefI~~~G~dirv~VvG~~ 217 (346)
T 2q7d_A 193 ---Q---------------PPCVVQNFINHNAVLYKVFVVGES 217 (346)
T ss_dssp -------------------CCEEEEECCCCTTEEEEEEEETTE
T ss_pred ---C---------------CCEEEEEeeCCCCeEEEEEEECCE
Confidence 0 24799999974 789988887553
No 102
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.13 E-value=0.013 Score=62.14 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=76.7
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES 401 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~ 401 (974)
+.|.+++.|..+.+.+.+. +++ .+..+.+. .+++++.. ..+|++|-+++++.+.+.++.|.+.
T Consensus 5 V~Ga~G~mG~~i~~~~~~~~~~e---lva~~d~~------------~dl~~~~~-~~~DvvIDfT~p~a~~~~~~~a~~~ 68 (245)
T 1p9l_A 5 VLGAKGKVGTTMVRAVAAADDLT---LSAELDAG------------DPLSLLTD-GNTEVVIDFTHPDVVMGNLEFLIDN 68 (245)
T ss_dssp EETTTSHHHHHHHHHHHHCTTCE---EEEEECTT------------CCTHHHHH-TTCCEEEECSCTTTHHHHHHHHHHT
T ss_pred EECCCCHHHHHHHHHHHhCCCCE---EEEEEccC------------CCHHHHhc-cCCcEEEEccChHHHHHHHHHHHHc
Confidence 5788889999998888754 665 45555433 24555432 2689998899999999999999999
Q ss_pred CCcEEEEEcCCCChHHHHHHHHHHhcCCC-Cce-EEccC-Ccccc
Q psy3769 402 ELELVICITEGIPVRDMLILKNKMKKNNS-KTL-LLGPN-CPGLI 443 (974)
Q Consensus 402 gv~~~vi~s~G~~e~~~~~l~~~a~~~~~-gi~-viGPn-c~G~~ 443 (974)
|++. |+-+.|+.+++.++|.+.|+ ++ ++. ++.|| ++|+.
T Consensus 69 g~~~-VigTTG~~~e~~~~l~~aa~--~~~~~~vv~a~N~siGv~ 110 (245)
T 1p9l_A 69 GIHA-VVGTTGFTAERFQQVESWLV--AKPNTSVLIAPNFAIGAV 110 (245)
T ss_dssp TCEE-EECCCCCCHHHHHHHHHHHH--TSTTCEEEECSCCCHHHH
T ss_pred CCCE-EEcCCCCCHHHHHHHHHHHH--hCCCCCEEEECCccHHHH
Confidence 9885 77788998877778888888 65 665 67888 55543
No 103
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.73 E-value=0.018 Score=64.13 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=73.2
Q ss_pred cccccCcccc-cchhhhhcc-CCCCceEEEEecCCCCCccc------cccccccchhhhcccCCCcEEEEEecchhHHHH
Q psy3769 323 IFGITGKTGR-FHTNLCLNY-GNGKKAFVAGVNPKKNGQKF------EEIPIFDTVKNAKNETGATVSVIYVPAIFATSA 394 (974)
Q Consensus 323 i~G~~~k~G~-~v~~~l~~~-g~~g~~~V~pVnP~~~g~~i------~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~ 394 (974)
|+|. +..|. .++..+.+. +++ .+.-+.+.. .++. .|.++|.|++++.+...+|+++|++|...-.+.
T Consensus 7 iiG~-G~~g~~~~~~~l~~~~~~~---l~av~d~~~-~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 81 (349)
T 3i23_A 7 FIGF-GKSANRYHLPYVMIRETLE---VKTIFDLHV-NEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDL 81 (349)
T ss_dssp EECC-SHHHHHTTHHHHTTCTTEE---EEEEECTTC-CHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHHH
T ss_pred EEcc-CHHHHHHHHHHHhhCCCeE---EEEEECCCH-HHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHH
Confidence 3452 34555 455555543 344 455566652 3444 688999999999875579999999999999999
Q ss_pred HHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 395 IWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 395 v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.+|+++| |++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 82 ~~~al~aG-k~Vl~EKP~a~~~~e~~~l~~~a~--~~g~~~~ 120 (349)
T 3i23_A 82 AKQAILAG-KSVIVEKPFCDTLEHAEELFALGQ--EKGVVVM 120 (349)
T ss_dssp HHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHHHHHcC-CEEEEECCCcCCHHHHHHHHHHHH--HcCCeEE
Confidence 99999999 55444222 334556788999999 8887653
No 104
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.70 E-value=0.026 Score=62.01 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=71.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCC----ccccccccccchhhhc--------ccCCCcEEEEEecchh
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG----QKFEEIPIFDTVKNAK--------NETGATVSVIYVPAIF 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g----~~i~G~~~y~sl~dip--------~~~~vDlavi~vp~~~ 390 (974)
|+|..+..|..+++.+.+.+.+ .+..+.+.... +...+.++|.|++++. +...+|+++|++|...
T Consensus 8 iIG~gG~i~~~h~~~l~~~~~~---lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~ 84 (312)
T 3o9z_A 8 LTGLAGYIAPRHLKAIKEVGGV---LVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHL 84 (312)
T ss_dssp EECTTSSSHHHHHHHHHHTTCE---EEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGG
T ss_pred EECCChHHHHHHHHHHHhCCCE---EEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchh
Confidence 3454445566666666655543 44444443211 1224678999999886 3458999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE
Q psy3769 391 ATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 391 v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
-.+.+.+|+++| |++++ -- ....++.++|.+.|+ ++|..+
T Consensus 85 H~~~~~~al~aG-khVl~-EKPla~~~~ea~~l~~~a~--~~g~~~ 126 (312)
T 3o9z_A 85 HYPQIRMALRLG-ANALS-EKPLVLWPEEIARLKELEA--RTGRRV 126 (312)
T ss_dssp HHHHHHHHHHTT-CEEEE-CSSSCSCHHHHHHHHHHHH--HHCCCE
T ss_pred hHHHHHHHHHCC-CeEEE-ECCCCCCHHHHHHHHHHHH--HcCCEE
Confidence 999999999999 55443 32 233456778999999 888765
No 105
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.66 E-value=0.014 Score=64.71 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=73.2
Q ss_pred cccccCcccc-cchhhhhcc-CCCCceEEEEecCCCCCccccccccccchhhhccc-CCCcEEEEEecchhHHHHHHHHH
Q psy3769 323 IFGITGKTGR-FHTNLCLNY-GNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNE-TGATVSVIYVPAIFATSAIWEAI 399 (974)
Q Consensus 323 i~G~~~k~G~-~v~~~l~~~-g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~-~~vDlavi~vp~~~v~~~v~e~~ 399 (974)
|+| .+..|. ..++.+.+. +++ .+.-+.+. .+..|+++|.|++++.+. ..+|+++|++|...-.+.+.+|+
T Consensus 30 iiG-~G~ig~~~~~~~l~~~~~~~---lvav~d~~---~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al 102 (330)
T 4ew6_A 30 IVG-VGKIVRDQHLPSIAKNANFK---LVATASRH---GTVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKAL 102 (330)
T ss_dssp EEC-CSHHHHHTHHHHHHHCTTEE---EEEEECSS---CCCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHH
T ss_pred EEe-cCHHHHHHHHHHHHhCCCeE---EEEEEeCC---hhhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 456 245665 566666654 344 34555555 345799999999999765 57999999999999999999999
Q ss_pred HcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 400 ESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 400 ~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
++| |.+++=-. +...++.++|.+.|+ ++|+.+
T Consensus 103 ~aG-khVl~EKP~a~~~~e~~~l~~~a~--~~g~~~ 135 (330)
T 4ew6_A 103 VAG-KHVFLEKPPGATLSEVADLEALAN--KQGASL 135 (330)
T ss_dssp HTT-CEEEECSSSCSSHHHHHHHHHHHH--HHTCCE
T ss_pred HcC-CcEEEeCCCCCCHHHHHHHHHHHH--hcCCeE
Confidence 999 55443222 334556678999999 888754
No 106
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.50 E-value=0.013 Score=65.33 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=74.3
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+|. +..|..+++.+.+. +++ .+..++++... + +-.|++.|.+++++.+...+|++++++|...-.+.+.+
T Consensus 10 iiG~-G~~g~~~~~~l~~~~~~~---lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~ 85 (354)
T 3db2_A 10 AIGL-GRWAYVMADAYTKSEKLK---LVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQ 85 (354)
T ss_dssp EECC-SHHHHHHHHHHTTCSSEE---EEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHH
T ss_pred EEcc-CHHHHHHHHHHHhCCCcE---EEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHH
Confidence 3552 45677777777765 444 44555655300 1 12488999999999854579999999999999999999
Q ss_pred HHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 398 AIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 398 ~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+++| +++++--. +...++.++|.+.|+ ++|+.+
T Consensus 86 al~~g-k~vl~EKP~~~~~~~~~~l~~~a~--~~~~~~ 120 (354)
T 3db2_A 86 CARSG-KHIYVEKPISVSLDHAQRIDQVIK--ETGVKF 120 (354)
T ss_dssp HHHTT-CEEEEESSSCSSHHHHHHHHHHHH--HHCCCE
T ss_pred HHHcC-CEEEEccCCCCCHHHHHHHHHHHH--HcCCeE
Confidence 99999 44455333 455566788999998 888754
No 107
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.47 E-value=0.032 Score=57.89 Aligned_cols=105 Identities=15% Similarity=0.168 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHhhcCC-eEEEEEccccccCcccccchhhhh-ccCCCCceEE--EEecCCCCCccccccccc--cchhh
Q psy3769 299 TIKTITEAFKIMMQQNN-LKTILVNIFGITGKTGRFHTNLCL-NYGNGKKAFV--AGVNPKKNGQKFEEIPIF--DTVKN 372 (974)
Q Consensus 299 ~~~~v~~a~~~il~~~~-~~~i~vni~G~~~k~G~~v~~~l~-~~g~~g~~~V--~pVnP~~~g~~i~G~~~y--~sl~d 372 (974)
..+...+.++.++...+ .+++ |+| .+..|..+.+++. +.||+ .+ +-.||...|..+.|+|++ .++.+
T Consensus 63 ~v~~L~~~~~~~lg~~~~~rV~---IIG-aG~~G~~la~~~~~~~g~~---iVg~~D~dp~k~g~~i~gv~V~~~~dl~e 135 (211)
T 2dt5_A 63 TVPVLKRELRHILGLNRKWGLC---IVG-MGRLGSALADYPGFGESFE---LRGFFDVDPEKVGRPVRGGVIEHVDLLPQ 135 (211)
T ss_dssp EHHHHHHHHHHHHTTTSCEEEE---EEC-CSHHHHHHHHCSCCCSSEE---EEEEEESCTTTTTCEETTEEEEEGGGHHH
T ss_pred EhHHHHHHHHHHhCcCCCCEEE---EEC-ccHHHHHHHHhHhhcCCcE---EEEEEeCCHHHHhhhhcCCeeecHHhHHH
Confidence 34556677777766544 4444 456 2345666665432 11554 33 445887767788898875 45555
Q ss_pred hcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 373 AKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 373 ip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+.++ .+|.+++++|.....++++.|.++|++.++.++.
T Consensus 136 ll~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 136 RVPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp HSTT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCc
Confidence 5555 7999999999999999999999999998766553
No 108
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.29 E-value=0.018 Score=64.31 Aligned_cols=111 Identities=12% Similarity=0.110 Sum_probs=76.5
Q ss_pred CCeEEEEEccccccCcccccchhhhhcc--CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEec
Q psy3769 314 NNLKTILVNIFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVP 387 (974)
Q Consensus 314 ~~~~~i~vni~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp 387 (974)
+..++- |+|. +..|..+++.+.+. +++ .+..++++... + +-.|+++|.|++++.+...+|+++|++|
T Consensus 12 ~~~rvg---iiG~-G~~g~~~~~~l~~~~~~~~---lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 84 (354)
T 3q2i_A 12 RKIRFA---LVGC-GRIANNHFGALEKHADRAE---LIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTP 84 (354)
T ss_dssp SCEEEE---EECC-STTHHHHHHHHHHTTTTEE---EEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSC
T ss_pred CcceEE---EEcC-cHHHHHHHHHHHhCCCCeE---EEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCC
Confidence 345544 3452 45677777777765 444 45555665310 1 1247899999999875457999999999
Q ss_pred chhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 388 AIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 388 ~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+..-.+.+.+|+++| +++++--. ....++.++|.+.|+ ++|..+
T Consensus 85 ~~~h~~~~~~al~~g-k~v~~EKP~a~~~~~~~~l~~~a~--~~g~~~ 129 (354)
T 3q2i_A 85 SGLHPTQSIECSEAG-FHVMTEKPMATRWEDGLEMVKAAD--KAKKHL 129 (354)
T ss_dssp GGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHH--HHTCCE
T ss_pred cHHHHHHHHHHHHCC-CCEEEeCCCcCCHHHHHHHHHHHH--HhCCeE
Confidence 999999999999999 55444222 344556778899999 888765
No 109
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=95.23 E-value=0.37 Score=55.93 Aligned_cols=61 Identities=16% Similarity=0.232 Sum_probs=55.2
Q ss_pred CCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCC-----CHHHHHHHHHHHhhcCCeEEEEE
Q psy3769 261 NGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGA-----TIKTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 261 ~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a-----~~~~v~~a~~~il~~~~~~~i~v 321 (974)
.|+||++.-.++++.+.+|.+...|---..|.-+|+.+ ..-.+.+.++.+..||++++|++
T Consensus 112 ~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~l 177 (480)
T 3dmy_A 112 EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAF 177 (480)
T ss_dssp EEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEE
T ss_pred CCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEE
Confidence 69999999999999999999999999899999999994 44668889999999999999863
No 110
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.19 E-value=0.019 Score=63.81 Aligned_cols=105 Identities=17% Similarity=0.228 Sum_probs=73.8
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+|. +..|..+++.+.+. +++ .+..+++.... + +-.|.++|.+++++.+...+|++++++|+....+.+.+
T Consensus 9 iiG~-G~~g~~~~~~l~~~~~~~---l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~ 84 (344)
T 3euw_A 9 LFGA-GRIGHVHAANIAANPDLE---LVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITR 84 (344)
T ss_dssp EECC-SHHHHHHHHHHHHCTTEE---EEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHH
T ss_pred EECC-cHHHHHHHHHHHhCCCcE---EEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHH
Confidence 3553 45677777777764 444 34445554300 0 12478899999999765689999999999999999999
Q ss_pred HHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 398 AIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 398 ~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+++|.. +++--. +...++.++|.+.|+ ++|+.+
T Consensus 85 al~~gk~-v~~EKP~~~~~~~~~~l~~~a~--~~g~~~ 119 (344)
T 3euw_A 85 AVERGIP-ALCEKPIDLDIEMVRACKEKIG--DGASKV 119 (344)
T ss_dssp HHHTTCC-EEECSCSCSCHHHHHHHHHHHG--GGGGGE
T ss_pred HHHcCCc-EEEECCCCCCHHHHHHHHHHHH--hcCCeE
Confidence 9999954 444332 445566778999999 888754
No 111
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.17 E-value=0.022 Score=63.78 Aligned_cols=105 Identities=15% Similarity=0.233 Sum_probs=72.5
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCCc---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNGQ---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|+| .+..|..+++.+.+. +++ .+..+.++.... .-.|+++|.|++++.+...+|+++|++|...-.+.+.+|
T Consensus 10 iiG-~G~~g~~~~~~l~~~~~~~---l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 85 (359)
T 3e18_A 10 IVG-YGGMGSYHVTLASAADNLE---VHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISA 85 (359)
T ss_dssp EEC-CSHHHHHHHHHHHTSTTEE---EEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHH
T ss_pred EEC-cCHHHHHHHHHHHhCCCcE---EEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 345 245666677777654 344 333444442001 135889999999997656899999999999999999999
Q ss_pred HHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 399 IESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 399 ~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+++| |.+++=-. ....++.++|.+.|+ ++|+.+
T Consensus 86 l~aG-khVl~EKP~a~~~~ea~~l~~~a~--~~g~~~ 119 (359)
T 3e18_A 86 LEAG-KHVVCEKPVTMTSEDLLAIMDVAK--RVNKHF 119 (359)
T ss_dssp HHTT-CEEEEESSCCSSHHHHHHHHHHHH--HHTCCE
T ss_pred HHCC-CCEEeeCCCcCCHHHHHHHHHHHH--HhCCeE
Confidence 9999 55454322 344556778999999 888764
No 112
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.17 E-value=0.035 Score=60.81 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=71.2
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCC-Ccccc-ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKN-GQKFE-EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAI 399 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~-g~~i~-G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~ 399 (974)
|+|. +..|..+++.+.+. +++ .+..+.+... .+... ..++|.+.+++.+...+|++++++|+....+.+.+|+
T Consensus 15 iIG~-G~~g~~~~~~l~~~~~~~---~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 90 (315)
T 3c1a_A 15 LIGA-GRWGKNYIRTIAGLPGAA---LVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEITLAAI 90 (315)
T ss_dssp EEEC-TTTTTTHHHHHHHCTTEE---EEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHHHHH
T ss_pred EECC-cHHHHHHHHHHHhCCCcE---EEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHHHHH
Confidence 4563 56777788888764 444 3445554320 01111 1578999999875447999999999999999999999
Q ss_pred HcCCcEEEEEc-CCCChHHHHHHHHHHhcCCCCceE
Q psy3769 400 ESELELVICIT-EGIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 400 ~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
++| +++++-. .....++.++|.+.|+ ++|+.+
T Consensus 91 ~~G-k~v~~eKP~~~~~~~~~~l~~~a~--~~g~~~ 123 (315)
T 3c1a_A 91 ASG-KAVLVEKPLTLDLAEAEAVAAAAK--ATGVMV 123 (315)
T ss_dssp HTT-CEEEEESSSCSCHHHHHHHHHHHH--HHCCCE
T ss_pred HCC-CcEEEcCCCcCCHHHHHHHHHHHH--HcCCEE
Confidence 999 4545432 2344556678899998 778664
No 113
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.16 E-value=0.045 Score=63.09 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=80.0
Q ss_pred CCeEEEEEccccc---cCcccccchhhhhcc--CCCCceEEEEecCCCCC-c---cccccc---cccchhhhcccCCCcE
Q psy3769 314 NNLKTILVNIFGI---TGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNG-Q---KFEEIP---IFDTVKNAKNETGATV 381 (974)
Q Consensus 314 ~~~~~i~vni~G~---~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g-~---~i~G~~---~y~sl~dip~~~~vDl 381 (974)
..+++- |+|. .+..|..+++.+.+. +++ .+..+.+.... + +-.|.+ +|.+++++.+...+|+
T Consensus 19 ~~irvg---iIG~g~~gG~~g~~~~~~l~~~~~~~~---lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~ 92 (438)
T 3btv_A 19 APIRVG---FVGLNAAKGWAIKTHYPAILQLSSQFQ---ITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDM 92 (438)
T ss_dssp CCEEEE---EESCCTTSSSTTTTHHHHHHHTTTTEE---EEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSE
T ss_pred CCCEEE---EEcccCCCChHHHHHHHHHHhcCCCeE---EEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCE
Confidence 345544 4664 367788888888765 454 45555554300 0 123665 8999999986557999
Q ss_pred EEEEecchhHHHHHHHHHHcCC-----cEEEEEc-CCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 382 SVIYVPAIFATSAIWEAIESEL-----ELVICIT-EGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 382 avi~vp~~~v~~~v~e~~~~gv-----~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
++|++|...-.+.+.+|+++|. |++++=- -....++.++|.+.|+ ++|+.+.
T Consensus 93 V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~--~~g~~~~ 150 (438)
T 3btv_A 93 IVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAA--ERGVQTI 150 (438)
T ss_dssp EEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHH--TTTCEEE
T ss_pred EEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHH--HcCCeEE
Confidence 9999999999999999999994 7755532 2344556788999999 8887653
No 114
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=95.13 E-value=0.024 Score=62.59 Aligned_cols=105 Identities=13% Similarity=0.195 Sum_probs=73.5
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+|. +..|..+++.+.+. +++ .+..+++.... + +-.|++ |.+++++.+...+|++++++|+..-.+.+.+
T Consensus 8 iiG~-G~~g~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~ 82 (331)
T 4hkt_A 8 LLGA-GRIGKVHAKAVSGNADAR---LVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIER 82 (331)
T ss_dssp EECC-SHHHHHHHHHHHHCTTEE---EEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHHH
T ss_pred EECC-CHHHHHHHHHHhhCCCcE---EEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHHH
Confidence 3552 45677777777764 444 34445554300 1 234788 9999999765579999999999999999999
Q ss_pred HHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 398 AIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 398 ~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
|+++| +++++--. ....++.++|.+.|+ ++|+.+.
T Consensus 83 al~~g-k~v~~EKP~~~~~~~~~~l~~~a~--~~g~~~~ 118 (331)
T 4hkt_A 83 FARAG-KAIFCEKPIDLDAERVRACLKVVS--DTKAKLM 118 (331)
T ss_dssp HHHTT-CEEEECSCSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHHcC-CcEEEecCCCCCHHHHHHHHHHHH--HcCCeEE
Confidence 99999 55444322 455566788999999 8887654
No 115
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.04 E-value=0.034 Score=62.73 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=73.6
Q ss_pred cCCeEEEEEccccccCcccccchhhhhcc--CCCCceEEEEecCCCCC----ccccccccccchhhhcccCCCcEEEEEe
Q psy3769 313 QNNLKTILVNIFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNG----QKFEEIPIFDTVKNAKNETGATVSVIYV 386 (974)
Q Consensus 313 ~~~~~~i~vni~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g----~~i~G~~~y~sl~dip~~~~vDlavi~v 386 (974)
.|++|+.+ +|. + +|...++.+.+. +++ .+.-+.++... .+-.|+|+|.|++++.+ .+|+++|++
T Consensus 5 ~~~~rv~V---vG~-G-~g~~h~~a~~~~~~~~e---lvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~--~~D~v~i~~ 74 (372)
T 4gmf_A 5 SPKQRVLI---VGA-K-FGEMYLNAFMQPPEGLE---LVGLLAQGSARSRELAHAFGIPLYTSPEQITG--MPDIACIVV 74 (372)
T ss_dssp --CEEEEE---ECS-T-TTHHHHHTTSSCCTTEE---EEEEECCSSHHHHHHHHHTTCCEESSGGGCCS--CCSEEEECC
T ss_pred CCCCEEEE---Eeh-H-HHHHHHHHHHhCCCCeE---EEEEECCCHHHHHHHHHHhCCCEECCHHHHhc--CCCEEEEEC
Confidence 46777763 552 3 677777766654 454 34444554310 12359999999999987 899999999
Q ss_pred cchhH----HHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 387 PAIFA----TSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 387 p~~~v----~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
|...- .+..++|+++|. .+++= --+..++.++|.+.|+ ++|+.+.
T Consensus 75 p~~~h~~~~~~~a~~al~aGk-hVl~E-KPl~~~ea~~l~~~A~--~~g~~~~ 123 (372)
T 4gmf_A 75 RSTVAGGAGTQLARHFLARGV-HVIQE-HPLHPDDISSLQTLAQ--EQGCCYW 123 (372)
T ss_dssp C--CTTSHHHHHHHHHHHTTC-EEEEE-SCCCHHHHHHHHHHHH--HHTCCEE
T ss_pred CCcccchhHHHHHHHHHHcCC-cEEEe-cCCCHHHHHHHHHHHH--HcCCEEE
Confidence 98765 788999999995 44443 2355667789999999 8887653
No 116
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.02 E-value=0.042 Score=61.53 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=71.9
Q ss_pred cccccCccccc-chhhhhcc-CCCCceEEEEecCCC--CCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRF-HTNLCLNY-GNGKKAFVAGVNPKK--NGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~-v~~~l~~~-g~~g~~~V~pVnP~~--~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|+|. +..|.. ++..+.+. +++ .+..+.+.. ..++..+.++|.|++++.+...+|+++|++|...-.+.+.+|
T Consensus 10 iiG~-G~~g~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~a 85 (362)
T 3fhl_A 10 LAAF-GMSGQVFHAPFISTNPHFE---LYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMA 85 (362)
T ss_dssp ESCC-SHHHHHTTHHHHHHCTTEE---EEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHHH
T ss_pred EECC-CHHHHHHHHHHHhhCCCeE---EEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHH
Confidence 3552 345553 55555543 444 344444442 112334889999999998755799999999999999999999
Q ss_pred HHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 399 IESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 399 ~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+++| |++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 86 l~aG-khVl~EKP~a~~~~ea~~l~~~a~--~~g~~~~ 120 (362)
T 3fhl_A 86 LEAG-KNVVVEKPFTSTTKQGEELIALAK--KKGLMLS 120 (362)
T ss_dssp HHTT-CEEEEESSCCSSHHHHHHHHHHHH--HHTCCEE
T ss_pred HHCC-CeEEEecCCCCCHHHHHHHHHHHH--HcCCEEE
Confidence 9999 45455322 344566788999999 8887654
No 117
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.97 E-value=0.029 Score=62.56 Aligned_cols=106 Identities=9% Similarity=-0.019 Sum_probs=73.4
Q ss_pred cccccCcccc-cchhhhhcc-CCCCceEEEEecCCCC-Cc---cccccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGR-FHTNLCLNY-GNGKKAFVAGVNPKKN-GQ---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~-~v~~~l~~~-g~~g~~~V~pVnP~~~-g~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+..|. .+++.+.+. +++ .+..+++... .+ +-.|++.|.|++|+.+...+|+++|++|...-.+.+.
T Consensus 32 iIG-~G~~g~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 107 (350)
T 3rc1_A 32 VIG-CADIAWRRALPALEAEPLTE---VTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWID 107 (350)
T ss_dssp EES-CCHHHHHTHHHHHHHCTTEE---EEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHH
T ss_pred EEc-CcHHHHHHHHHHHHhCCCeE---EEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHH
Confidence 355 245665 566677655 444 3444455420 01 2348899999999986557999999999999999999
Q ss_pred HHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 397 EAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 397 e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+|+++|.. +++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 108 ~al~aGk~-Vl~EKP~a~~~~ea~~l~~~a~--~~g~~~~ 144 (350)
T 3rc1_A 108 RALRAGKH-VLAEKPLTTDRPQAERLFAVAR--ERGLLLM 144 (350)
T ss_dssp HHHHTTCE-EEEESSSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHHHCCCc-EEEeCCCCCCHHHHHHHHHHHH--HhCCEEE
Confidence 99999954 444222 445566788999999 8887654
No 118
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.94 E-value=0.065 Score=58.99 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=71.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCc----cccccccccchhhhc---------ccCCCcEEEEEecch
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ----KFEEIPIFDTVKNAK---------NETGATVSVIYVPAI 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~----~i~G~~~y~sl~dip---------~~~~vDlavi~vp~~ 389 (974)
|+|..+..|..+++.+.+.+.+ .+..+.+..... ...+.++|.|.+++. ....+|+++|++|..
T Consensus 8 iIG~gG~i~~~h~~~l~~~~~~---lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~ 84 (318)
T 3oa2_A 8 LIGAAGYIAPRHMRAIKDTGNC---LVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNY 84 (318)
T ss_dssp EETTTSSSHHHHHHHHHHTTCE---EEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGG
T ss_pred EECCCcHHHHHHHHHHHhCCCE---EEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcH
Confidence 3454345666666666665544 344444432111 123678899999875 234899999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 390 FATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 390 ~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
.-.+.+.+|+++| |++++=-. ....++.++|.+.|+ ++|..+
T Consensus 85 ~H~~~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~--~~g~~~ 127 (318)
T 3oa2_A 85 LHYPHIAAGLRLG-CDVICEKPLVPTPEMLDQLAVIER--ETDKRL 127 (318)
T ss_dssp GHHHHHHHHHHTT-CEEEECSSCCSCHHHHHHHHHHHH--HHTCCE
T ss_pred HHHHHHHHHHHCC-CeEEEECCCcCCHHHHHHHHHHHH--HhCCEE
Confidence 9999999999999 55443222 334556788999999 888765
No 119
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=94.80 E-value=0.068 Score=60.74 Aligned_cols=92 Identities=21% Similarity=0.259 Sum_probs=73.0
Q ss_pred CCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEcc-CCCchHHHHHHHHh
Q psy3769 461 GRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEI-GGLDEIYAANWIKK 539 (974)
Q Consensus 461 G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~-~g~~~~~~~~f~~~ 539 (974)
|+|++++-||+++...++.+...|...+.++-+|+.+ ..-.+.+.++.+.+||++++|++.+=+ +-+.+.-++...++
T Consensus 248 g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a-~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a 326 (397)
T 3ufx_B 248 GNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGA-KADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRA 326 (397)
T ss_dssp SSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCC-CHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHH
T ss_pred CcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCC-CHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 7899999999999999999999999999999999987 355688889999999999999986543 21112334455555
Q ss_pred -c---CCCCEEEEecccC
Q psy3769 540 -N---MKKPVIGFIAGIT 553 (974)
Q Consensus 540 -~---~~KPVv~lk~Grs 553 (974)
. .+||||+--.|..
T Consensus 327 ~~~~~~~kPvvv~~~G~~ 344 (397)
T 3ufx_B 327 LEEGLLTKPVVMRVAGTA 344 (397)
T ss_dssp HTTTCCCSCEEEEEEEEC
T ss_pred HHhhCCCCcEEEEccCCC
Confidence 2 3799999888864
No 120
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.72 E-value=0.031 Score=58.16 Aligned_cols=105 Identities=17% Similarity=0.336 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhhcC-CeEEEEEccccccCcccccchhhhh--ccCCCCceEEEEecCCCCCcccccccccc--chhhhc
Q psy3769 300 IKTITEAFKIMMQQN-NLKTILVNIFGITGKTGRFHTNLCL--NYGNGKKAFVAGVNPKKNGQKFEEIPIFD--TVKNAK 374 (974)
Q Consensus 300 ~~~v~~a~~~il~~~-~~~~i~vni~G~~~k~G~~v~~~l~--~~g~~g~~~V~pVnP~~~g~~i~G~~~y~--sl~dip 374 (974)
.+...+.++.++... ..+++ |+| .|..|..+.+++. ..||+- --++-.||...|..+.|+|++. ++.++.
T Consensus 69 v~~L~~~~~~~lg~~~~~rV~---IIG-AG~~G~~La~~~~~~~~g~~i-Vg~~D~dp~k~g~~i~gv~V~~~~dl~eli 143 (215)
T 2vt3_A 69 VDYLLSFFRKTLDQDEMTDVI---LIG-VGNLGTAFLHYNFTKNNNTKI-SMAFDINESKIGTEVGGVPVYNLDDLEQHV 143 (215)
T ss_dssp HHHHHHHHHHHHHHC---CEE---EEC-CSHHHHHHHHCC------CCE-EEEEESCTTTTTCEETTEEEEEGGGHHHHC
T ss_pred hHHHHHHHHHHhCcCCCCEEE---EEc-cCHHHHHHHHHHhcccCCcEE-EEEEeCCHHHHHhHhcCCeeechhhHHHHH
Confidence 344566666665543 33444 456 2456666666422 446762 0235568877677889999775 444554
Q ss_pred ccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 375 NETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 375 ~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
++ . |.+++++|.....++++.|.+.|++.++.++.
T Consensus 144 ~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 144 KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCc
Confidence 32 3 99999999999999999999999998777664
No 121
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=94.59 E-value=0.086 Score=58.12 Aligned_cols=105 Identities=11% Similarity=0.027 Sum_probs=70.2
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCC-Cc---cccccc-cccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKN-GQ---KFEEIP-IFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~-g~---~i~G~~-~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. +..|..+++.+.+.+ ++ .+..++++.. .+ +-.|.+ +|.|++++.+...+|+++|++|...-.+.+.
T Consensus 10 iiG~-G~ig~~~~~~l~~~~~~~---~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 85 (329)
T 3evn_A 10 VVST-AKVAPRFIEGVRLAGNGE---VVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAK 85 (329)
T ss_dssp EEBC-CTTHHHHHHHHHHHCSEE---EEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred EEec-hHHHHHHHHHHHhCCCcE---EEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHH
Confidence 3452 456666666666543 32 2333344321 11 223665 8999999986557999999999999999999
Q ss_pred HHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 397 EAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 397 e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+|+++|. .+++=-. ....++.++|.+.|+ ++|+.+
T Consensus 86 ~al~aGk-~Vl~EKP~a~~~~e~~~l~~~a~--~~~~~~ 121 (329)
T 3evn_A 86 AALLAGK-HVLVEKPFTLTYDQANELFALAE--SCNLFL 121 (329)
T ss_dssp HHHHTTC-EEEEESSCCSSHHHHHHHHHHHH--HTTCCE
T ss_pred HHHHCCC-eEEEccCCcCCHHHHHHHHHHHH--HcCCEE
Confidence 9999994 4444322 344556778999999 888764
No 122
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.59 E-value=0.03 Score=62.18 Aligned_cols=116 Identities=13% Similarity=0.166 Sum_probs=76.7
Q ss_pred cccccCcccccchhhhh-cc-CCCCceEEEEecCCCCC-c---cccc--cccccchhhhcccCCCcEEEEEecchhHHHH
Q psy3769 323 IFGITGKTGRFHTNLCL-NY-GNGKKAFVAGVNPKKNG-Q---KFEE--IPIFDTVKNAKNETGATVSVIYVPAIFATSA 394 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~-~~-g~~g~~~V~pVnP~~~g-~---~i~G--~~~y~sl~dip~~~~vDlavi~vp~~~v~~~ 394 (974)
|+|. +..|..+++.+. +. +++ .+..+++.... + +-.| .++|.|++++.+..++|++++++|...-.+.
T Consensus 7 iIG~-G~~g~~~~~~l~~~~~~~~---l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (344)
T 3mz0_A 7 VIGT-GAIGKEHINRITNKLSGAE---IVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESS 82 (344)
T ss_dssp EECC-SHHHHHHHHHHHHTCSSEE---EEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EECc-cHHHHHHHHHHHhhCCCcE---EEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHH
Confidence 3452 456667777776 42 444 34455554300 1 1235 6789999999865569999999999999999
Q ss_pred HHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEEccCCcccccc
Q psy3769 395 IWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIVP 445 (974)
Q Consensus 395 v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~~ 445 (974)
+.+|+++| +++++=-. ....++.++|.+.|+ ++|.+++..++.--++|
T Consensus 83 ~~~al~~G-k~vl~EKP~a~~~~e~~~l~~~a~--~~g~~~~~v~~~~r~~p 131 (344)
T 3mz0_A 83 VLKAIKAQ-KYVFCEKPLATTAEGCMRIVEEEI--KVGKRLVQVGFMRRYDS 131 (344)
T ss_dssp HHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHH--HHSSCCEEECCGGGGSH
T ss_pred HHHHHHCC-CcEEEcCCCCCCHHHHHHHHHHHH--HHCCEEEEEecccccCH
Confidence 99999999 45444222 344566788999999 88887643333333333
No 123
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.55 E-value=0.043 Score=60.93 Aligned_cols=106 Identities=9% Similarity=0.193 Sum_probs=73.1
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---cccccc-cccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIP-IFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~-~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+..|..+++.+.+. +++ .+..+++.... + +-.|++ +|.|++++.+...+|++++++|+....+.+.
T Consensus 7 iIG-~G~~g~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 82 (344)
T 3ezy_A 7 VIG-LGRIGTIHAENLKMIDDAI---LYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVI 82 (344)
T ss_dssp EEC-CSHHHHHHHHHGGGSTTEE---EEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred EEc-CCHHHHHHHHHHHhCCCcE---EEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHH
Confidence 455 245677777777654 343 34445554300 1 123664 8999999976557999999999999999999
Q ss_pred HHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 397 EAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 397 e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+|+++| +.+++--. ....++.++|.+.|+ ++|+.+.
T Consensus 83 ~al~~g-k~v~~EKP~~~~~~e~~~l~~~a~--~~g~~~~ 119 (344)
T 3ezy_A 83 ACAKAK-KHVFCEKPLSLNLADVDRMIEETK--KADVILF 119 (344)
T ss_dssp HHHHTT-CEEEEESCSCSCHHHHHHHHHHHH--HHTCCEE
T ss_pred HHHhcC-CeEEEECCCCCCHHHHHHHHHHHH--HhCCcEE
Confidence 999999 45454433 455566788999999 8887543
No 124
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=94.54 E-value=0.04 Score=61.61 Aligned_cols=106 Identities=15% Similarity=0.169 Sum_probs=73.7
Q ss_pred cccccCcccccchhhhh-cc-CCCCceEEEEecCCCCCc----cccc--cccccchhhhcccCCCcEEEEEecchhHHHH
Q psy3769 323 IFGITGKTGRFHTNLCL-NY-GNGKKAFVAGVNPKKNGQ----KFEE--IPIFDTVKNAKNETGATVSVIYVPAIFATSA 394 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~-~~-g~~g~~~V~pVnP~~~g~----~i~G--~~~y~sl~dip~~~~vDlavi~vp~~~v~~~ 394 (974)
|+|. +..|..+++.+. +. +++ .+..+++..... +-.| .++|.+++++.+...+|+++|++|...-.+.
T Consensus 28 iIG~-G~~g~~~~~~l~~~~~~~~---lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 103 (357)
T 3ec7_A 28 IVGI-GMIGSDHLRRLANTVSGVE---VVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADV 103 (357)
T ss_dssp EECC-SHHHHHHHHHHHHTCTTEE---EEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EECC-cHHHHHHHHHHHhhCCCcE---EEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 3452 456667777776 32 444 344555553111 1235 6899999999865579999999999999999
Q ss_pred HHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 395 IWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 395 v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.+|+++| +.+++=-. ....++.++|.+.|+ ++|++++
T Consensus 104 ~~~al~aG-k~Vl~EKPla~~~~e~~~l~~~a~--~~g~~~~ 142 (357)
T 3ec7_A 104 AVAALNAN-KYVFCEKPLAVTAADCQRVIEAEQ--KNGKRMV 142 (357)
T ss_dssp HHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHH--HHTSCCE
T ss_pred HHHHHHCC-CCEEeecCccCCHHHHHHHHHHHH--HhCCeEE
Confidence 99999999 55454332 344556788999999 8888663
No 125
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=94.52 E-value=0.033 Score=63.07 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=73.1
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+|.-...|..+++.+.+. +++ .+..+.+.... + +-.|+++|.|++|+.+...+|+++|++|+..-.+.+.+
T Consensus 7 iiG~G~~~~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~ 83 (387)
T 3moi_A 7 ICGLGFAGSVLMAPAMRHHPDAQ---IVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQ 83 (387)
T ss_dssp EECCSHHHHTTHHHHHHHCTTEE---EEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHhCCCeE---EEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHH
Confidence 4553224566667776654 344 45555554200 1 12389999999999865579999999999999999999
Q ss_pred HHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 398 AIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 398 ~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+++| |++++=-. ....++.++|.+.|+ ++|+.+
T Consensus 84 al~aG-k~Vl~EKP~a~~~~e~~~l~~~a~--~~g~~~ 118 (387)
T 3moi_A 84 ASEQG-LHIIVEKPLTLSRDEADRMIEAVE--RAGVHL 118 (387)
T ss_dssp HHHTT-CEEEECSCCCSCHHHHHHHHHHHH--HHTCCE
T ss_pred HHHCC-CceeeeCCccCCHHHHHHHHHHHH--HhCCeE
Confidence 99999 55444322 334556778999999 888764
No 126
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.49 E-value=0.078 Score=58.70 Aligned_cols=106 Identities=17% Similarity=0.266 Sum_probs=71.1
Q ss_pred cccccCcccccchhhhh-cc-CCCCceEEEEecCCCCCc----ccccc-ccccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCL-NY-GNGKKAFVAGVNPKKNGQ----KFEEI-PIFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~-~~-g~~g~~~V~pVnP~~~g~----~i~G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+|. +..|..+++.+. +. +++ .+..+.++.... +-.|. ++|.+++++.+...+|++++++|+....+.+
T Consensus 13 iiG~-G~ig~~~~~~l~~~~~~~~---~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 88 (346)
T 3cea_A 13 IIGL-GRLGERHARHLVNKIQGVK---LVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMT 88 (346)
T ss_dssp EECC-STTHHHHHHHHHHTCSSEE---EEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHH
T ss_pred EEcC-CHHHHHHHHHHHhcCCCcE---EEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHH
Confidence 4553 566777777766 43 444 344445543001 12366 6899999987544799999999999999999
Q ss_pred HHHHHcCCcEEEEEc-CCCChHHHHHHHHHHhcCCC-CceEE
Q psy3769 396 WEAIESELELVICIT-EGIPVRDMLILKNKMKKNNS-KTLLL 435 (974)
Q Consensus 396 ~e~~~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~-gi~vi 435 (974)
.+|+++| +.+++-. .....++.++|.+.|+ ++ |+.+.
T Consensus 89 ~~al~~G-~~v~~eKp~~~~~~~~~~l~~~a~--~~~~~~~~ 127 (346)
T 3cea_A 89 IYAMNAG-LNVFCEKPLGLDFNEVDEMAKVIK--SHPNQIFQ 127 (346)
T ss_dssp HHHHHTT-CEEEECSCCCSCHHHHHHHHHHHH--TCTTSCEE
T ss_pred HHHHHCC-CEEEEcCCCCCCHHHHHHHHHHHH--hCCCCeEE
Confidence 9999999 4544421 1334456678999999 88 87764
No 127
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=94.44 E-value=0.05 Score=61.00 Aligned_cols=106 Identities=14% Similarity=0.196 Sum_probs=71.6
Q ss_pred cccccCccccc-chhhhhcc-CCCCceEEEEecCCC--CCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRF-HTNLCLNY-GNGKKAFVAGVNPKK--NGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~-v~~~l~~~-g~~g~~~V~pVnP~~--~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|+|. +..|.. +++.+.+. +++ .+..+.+.. ......|.++|.|++++.+...+|+++|++|...-.+.+.+|
T Consensus 12 iiG~-G~~g~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~a 87 (364)
T 3e82_A 12 LIGY-GFVGKTFHAPLIRSVPGLN---LAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLA 87 (364)
T ss_dssp EECC-SHHHHHTHHHHHHTSTTEE---EEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHH
T ss_pred EECC-CHHHHHHHHHHHhhCCCeE---EEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHH
Confidence 3452 445553 45555543 444 344445542 001234789999999998656899999999999999999999
Q ss_pred HHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 399 IESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 399 ~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+++| |.+++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 88 l~aG-k~Vl~EKPla~~~~e~~~l~~~a~--~~g~~~~ 122 (364)
T 3e82_A 88 LNAG-KHVVVDKPFTLDMQEARELIALAE--EKQRLLS 122 (364)
T ss_dssp HHTT-CEEEECSCSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHCC-CcEEEeCCCcCCHHHHHHHHHHHH--HhCCeEE
Confidence 9999 55444222 344556778999999 8887653
No 128
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=94.43 E-value=0.06 Score=59.45 Aligned_cols=105 Identities=10% Similarity=-0.058 Sum_probs=72.2
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-c---ccccc-ccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. +..|..+++.+.+. +++ .+..++++... + +-.|. ++|.+++++.+...+|++++++|+..-.+.+.
T Consensus 10 iiG~-G~~g~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 85 (330)
T 3e9m_A 10 IMST-AQIVPRFVAGLRESAQAE---VRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAK 85 (330)
T ss_dssp ECSC-CTTHHHHHHHHHHSSSEE---EEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHH
T ss_pred EECc-hHHHHHHHHHHHhCCCcE---EEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHH
Confidence 3552 55677777777654 343 34445554310 1 12366 58999999976557999999999999999999
Q ss_pred HHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 397 EAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 397 e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+|+++|.. +++=-. +...++.++|.+.|+ ++|+.+
T Consensus 86 ~al~~gk~-vl~EKP~~~~~~e~~~l~~~a~--~~g~~~ 121 (330)
T 3e9m_A 86 LALSQGKP-VLLEKPFTLNAAEAEELFAIAQ--EQGVFL 121 (330)
T ss_dssp HHHHTTCC-EEECSSCCSSHHHHHHHHHHHH--HTTCCE
T ss_pred HHHHCCCe-EEEeCCCCCCHHHHHHHHHHHH--HcCCeE
Confidence 99999954 444322 445566788999999 888754
No 129
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=94.42 E-value=0.044 Score=61.31 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=71.3
Q ss_pred cccccCccccc-chhhhhcc-CCCCceEEEEecCCC--CCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRF-HTNLCLNY-GNGKKAFVAGVNPKK--NGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~-v~~~l~~~-g~~g~~~V~pVnP~~--~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|+|. +..|.. +.+.+.+. +++ .+..+.+.. ..++..+.++|.|++++.+...+|+++|++|...-.+.+.+|
T Consensus 10 iiG~-G~~g~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~a 85 (358)
T 3gdo_A 10 ILGY-GLSGSVFHGPLLDVLDEYQ---ISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMAC 85 (358)
T ss_dssp EECC-SHHHHHTTHHHHTTCTTEE---EEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHH
T ss_pred EEcc-CHHHHHHHHHHHhhCCCeE---EEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 3452 345553 45555543 343 344444442 001234789999999998656899999999999999999999
Q ss_pred HHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 399 IESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 399 ~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+++| |++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 86 l~aG-khVl~EKPla~~~~e~~~l~~~a~--~~g~~~~ 120 (358)
T 3gdo_A 86 IQAG-KHVVMEKPMTATAEEGETLKRAAD--EKGVLLS 120 (358)
T ss_dssp HHTT-CEEEEESSCCSSHHHHHHHHHHHH--HHTCCEE
T ss_pred HHcC-CeEEEecCCcCCHHHHHHHHHHHH--HcCCeEE
Confidence 9999 55555322 344556778999999 8887643
No 130
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=94.38 E-value=0.054 Score=59.59 Aligned_cols=109 Identities=11% Similarity=0.129 Sum_probs=71.5
Q ss_pred cccccCcccccc-hhhhhccCCCCceEEEEecCCCCCc----cccccc-cccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFH-TNLCLNYGNGKKAFVAGVNPKKNGQ----KFEEIP-IFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v-~~~l~~~g~~g~~~V~pVnP~~~g~----~i~G~~-~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. +..|..+ ++.+.+.+++ .+..++++.... +-.|.+ +|.+++++.+...+|++++++|+....+.+.
T Consensus 5 iiG~-G~~g~~~~~~~l~~~~~~---~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 5 LIGA-STIAREWVIGAIRATGGE---VVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp EESC-CHHHHHTHHHHHHHTTCE---EEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred EEcc-cHHHHHhhhHHhhcCCCe---EEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 3452 4566665 5566554444 344555543001 123665 8999999875446999999999999999999
Q ss_pred HHHHcCCcEEEEEc-CCCChHHHHHHHHHHhcCCCCceE-EccC
Q psy3769 397 EAIESELELVICIT-EGIPVRDMLILKNKMKKNNSKTLL-LGPN 438 (974)
Q Consensus 397 e~~~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~v-iGPn 438 (974)
+|+++| +++++-. .....++.++|.+.|+ ++|+.+ +|++
T Consensus 81 ~al~~G-k~v~~ekP~~~~~~~~~~l~~~a~--~~g~~~~~~~~ 121 (332)
T 2glx_A 81 AAIRAG-KHVLCEKPLAMTLEDAREMVVAAR--EAGVVLGTNHH 121 (332)
T ss_dssp HHHHTT-CEEEECSSSCSSHHHHHHHHHHHH--HHTCCEEECCC
T ss_pred HHHHCC-CeEEEeCCCcCCHHHHHHHHHHHH--HcCCEEEEeeh
Confidence 999999 4544432 2334556678899998 788764 4444
No 131
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=94.36 E-value=0.081 Score=56.19 Aligned_cols=98 Identities=10% Similarity=0.044 Sum_probs=74.1
Q ss_pred cCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEE
Q psy3769 327 TGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELV 406 (974)
Q Consensus 327 ~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~ 406 (974)
+|..|..+++. . +++ .++....|. .++ |+.+..+++++.. .+|++|-+.+.+.+.+.+..++++|+..
T Consensus 20 ~GaIG~~v~~~--~-~le---Lv~v~~~k~--gel-gv~a~~d~d~lla--~pD~VVe~A~~~av~e~~~~iL~aG~dv- 87 (253)
T 1j5p_A 20 MGNIGKKLVEL--G-NFE---KIYAYDRIS--KDI-PGVVRLDEFQVPS--DVSTVVECASPEAVKEYSLQILKNPVNY- 87 (253)
T ss_dssp CSHHHHHHHHH--S-CCS---EEEEECSSC--CCC-SSSEECSSCCCCT--TCCEEEECSCHHHHHHHHHHHTTSSSEE-
T ss_pred cCHHHHHHHhc--C-CcE---EEEEEeccc--ccc-CceeeCCHHHHhh--CCCEEEECCCHHHHHHHHHHHHHCCCCE-
Confidence 45677777776 3 676 344444443 355 8889999999985 8999999999999999999999999884
Q ss_pred EEEcCC-CChHH-HHHHHHHHhcCCCCceEEccC
Q psy3769 407 ICITEG-IPVRD-MLILKNKMKKNNSKTLLLGPN 438 (974)
Q Consensus 407 vi~s~G-~~e~~-~~~l~~~a~~~~~gi~viGPn 438 (974)
++.|.| +...+ .++|.++|+ ++|-++..|.
T Consensus 88 v~~S~gaLad~~l~~~L~~aA~--~gg~~l~vpS 119 (253)
T 1j5p_A 88 IIISTSAFADEVFRERFFSELK--NSPARVFFPS 119 (253)
T ss_dssp EECCGGGGGSHHHHHHHHHHHH--TCSCEEECCC
T ss_pred EEcChhhhcCHHHHHHHHHHHH--HCCCeEEecC
Confidence 677766 33333 478899999 9999987664
No 132
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=94.15 E-value=0.091 Score=57.54 Aligned_cols=104 Identities=12% Similarity=0.092 Sum_probs=69.9
Q ss_pred cccccCccccc-chhhhhcc-CCCCceEEEEecCCCCCc----cccccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRF-HTNLCLNY-GNGKKAFVAGVNPKKNGQ----KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~-v~~~l~~~-g~~g~~~V~pVnP~~~g~----~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. +..|.. +++.+.+. +++ .+..+++..... +-.|.++|.+.+++. ..+|++++++|+....+.+.
T Consensus 10 iiG~-G~~g~~~~~~~l~~~~~~~---lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~--~~~D~V~i~tp~~~h~~~~~ 83 (319)
T 1tlt_A 10 VVGL-GGIAQKAWLPVLAAASDWT---LQGAWSPTRAKALPICESWRIPYADSLSSLA--ASCDAVFVHSSTASHFDVVS 83 (319)
T ss_dssp EECC-STHHHHTHHHHHHSCSSEE---EEEEECSSCTTHHHHHHHHTCCBCSSHHHHH--TTCSEEEECSCTTHHHHHHH
T ss_pred EECC-CHHHHHHHHHHHHhCCCeE---EEEEECCCHHHHHHHHHHcCCCccCcHHHhh--cCCCEEEEeCCchhHHHHHH
Confidence 3553 556664 55666543 444 344555543111 123778899999883 37999999999999999999
Q ss_pred HHHHcCCcEEEEEc-CCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 397 EAIESELELVICIT-EGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 397 e~~~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+|+++|. .+++-. .....++.++|.+.|+ ++|+.+.
T Consensus 84 ~al~~G~-~v~~eKP~~~~~~~~~~l~~~a~--~~g~~~~ 120 (319)
T 1tlt_A 84 TLLNAGV-HVCVDKPLAENLRDAERLVELAA--RKKLTLM 120 (319)
T ss_dssp HHHHTTC-EEEEESSSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHHHcCC-eEEEeCCCCCCHHHHHHHHHHHH--HcCCeEE
Confidence 9999995 445432 2445566778999999 8887653
No 133
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.14 E-value=0.069 Score=58.98 Aligned_cols=109 Identities=11% Similarity=0.183 Sum_probs=71.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-Cc---ccccc-ccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQ---KFEEI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~---~i~G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+| .+..|..+++.+.+.+..+-..+....++.. .+ +-.|+ ++|.|++++.+...+|+++|++|...-.+.+.+
T Consensus 7 iiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~ 85 (334)
T 3ohs_X 7 IVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVML 85 (334)
T ss_dssp EEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHH
T ss_pred EEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHH
Confidence 455 3556666666666543211003444444420 01 12366 489999999865679999999999999999999
Q ss_pred HHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 398 AIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 398 ~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
|+++| |++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 86 al~~G-khVl~EKP~a~~~~e~~~l~~~a~--~~~~~~~ 121 (334)
T 3ohs_X 86 CLAAG-KAVLCEKPMGVNAAEVREMVTEAR--SRGLFLM 121 (334)
T ss_dssp HHHTT-CEEEEESSSSSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHhcC-CEEEEECCCCCCHHHHHHHHHHHH--HhCCEEE
Confidence 99999 55444322 334556778999999 8887654
No 134
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=93.94 E-value=0.063 Score=58.57 Aligned_cols=102 Identities=14% Similarity=0.059 Sum_probs=70.5
Q ss_pred ccccCccccc-chhhhhcc-CCCCceEEEEecCCCCC-c---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 324 FGITGKTGRF-HTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 324 ~G~~~k~G~~-v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
+|. +..|.. +++.+.+. +++ .+..+++.... + +-.|.+.|.|++++.+ .+|++++++|...-.+.+.+
T Consensus 12 IG~-G~~g~~~~~~~l~~~~~~~---l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~--~~D~V~i~tp~~~h~~~~~~ 85 (308)
T 3uuw_A 12 IGL-GSIAQKAYLPILTKSERFE---FVGAFTPNKVKREKICSDYRIMPFDSIESLAK--KCDCIFLHSSTETHYEIIKI 85 (308)
T ss_dssp ECC-SHHHHHHTHHHHTSCSSSE---EEEEECSCHHHHHHHHHHHTCCBCSCHHHHHT--TCSEEEECCCGGGHHHHHHH
T ss_pred Eec-CHHHHHHHHHHHHhCCCeE---EEEEECCCHHHHHHHHHHcCCCCcCCHHHHHh--cCCEEEEeCCcHhHHHHHHH
Confidence 452 456664 66666653 444 34455555300 1 1248888999999987 89999999999999999999
Q ss_pred HHHcCCcEEEEE-cCCCChHHHHHHHHHHhcCCCCceE
Q psy3769 398 AIESELELVICI-TEGIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 398 ~~~~gv~~~vi~-s~G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+++|.. +++= ......++.++|.+.|+ ++|+.+
T Consensus 86 al~~gk~-vl~EKP~~~~~~~~~~l~~~a~--~~g~~~ 120 (308)
T 3uuw_A 86 LLNLGVH-VYVDKPLASTVSQGEELIELST--KKNLNL 120 (308)
T ss_dssp HHHTTCE-EEECSSSSSSHHHHHHHHHHHH--HHTCCE
T ss_pred HHHCCCc-EEEcCCCCCCHHHHHHHHHHHH--HcCCEE
Confidence 9999955 3332 12344556778999999 888665
No 135
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=93.69 E-value=0.13 Score=56.79 Aligned_cols=70 Identities=3% Similarity=0.032 Sum_probs=55.1
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.++|.|++++.+...+|+++|++|...-.+.+.+|+++|. ++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 51 ~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~a~~~~e~~~l~~~a~--~~g~~~~ 121 (336)
T 2p2s_A 51 SVPFAASAEQLITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKPPLTTLEQLDAVQRRVA--ETGRKFA 121 (336)
T ss_dssp TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSCCSCHHHHHHHHHHHH--HHCCCEE
T ss_pred CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCCCCCCHHHHHHHHHHHH--HcCCEEE
Confidence 67899999999765579999999999999999999999994 5444221 234456678999999 8887654
No 136
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=93.52 E-value=0.062 Score=59.26 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=71.4
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCCccc-cccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNGQKF-EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIE 400 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g~~i-~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~ 400 (974)
|+| .++.|..+++.+.+. +++ .+..+.++.. ..+ .|+++|.+++++.. .+|++++++|+....+.+..|++
T Consensus 8 IiG-~G~mG~~~~~~l~~~~~~e---lvav~d~~~~-~~~~~gv~~~~d~~~ll~--~~DvViiatp~~~h~~~~~~al~ 80 (320)
T 1f06_A 8 IVG-YGNLGRSVEKLIAKQPDMD---LVGIFSRRAT-LDTKTPVFDVADVDKHAD--DVDVLFLCMGSATDIPEQAPKFA 80 (320)
T ss_dssp EEC-CSHHHHHHHHHHTTCSSEE---EEEEEESSSC-CSSSSCEEEGGGGGGTTT--TCSEEEECSCTTTHHHHHHHHHT
T ss_pred EEe-ecHHHHHHHHHHhcCCCCE---EEEEEcCCHH-HhhcCCCceeCCHHHHhc--CCCEEEEcCCcHHHHHHHHHHHH
Confidence 456 367788888888765 343 4455555421 111 37888999998863 79999999999988889999999
Q ss_pred cCCcEEEEEcC-CCChHHH-HHHHHHHhcCCCC-ceEEcc
Q psy3769 401 SELELVICITE-GIPVRDM-LILKNKMKKNNSK-TLLLGP 437 (974)
Q Consensus 401 ~gv~~~vi~s~-G~~e~~~-~~l~~~a~~~~~g-i~viGP 437 (974)
+|.. +++-.. +...++. ++|.+.|+ +++ +.+++.
T Consensus 81 aG~~-Vv~ekp~~~~~~~~~~~l~~~a~--~~~~v~v~~~ 117 (320)
T 1f06_A 81 QFAC-TVDTYDNHRDIPRHRQVMNEAAT--AAGNVALVST 117 (320)
T ss_dssp TTSE-EECCCCCGGGHHHHHHHHHHHHH--HHTCEEECSC
T ss_pred CCCE-EEECCCCcCCHHHHHHHHHHHHH--hCCCEEEEec
Confidence 9965 344333 3444454 67888888 666 455554
No 137
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=93.50 E-value=0.11 Score=60.44 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=69.8
Q ss_pred Ccccccchhhhhcc--CCCCceEEEEecCCCCC-c---cccccc---cccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 328 GKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNG-Q---KFEEIP---IFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 328 ~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g-~---~i~G~~---~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
+..|..+++.+.+. +++ .+..+.+.... + +-.|++ +|.|++++.+...+|+++|++|...-.+.+.+|
T Consensus 52 G~~g~~h~~~l~~~~~~~~---lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 52 SWVAKTHFLAIQQLSSQFQ---IVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNI 128 (479)
T ss_dssp SHHHHTHHHHHHHTTTTEE---EEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCeE---EEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 45566666666653 343 33444443200 0 123555 899999998655799999999999999999999
Q ss_pred HHcCC-----cEEEEEcC-CCChHHHHHHHHHHhcCCCC-ceE
Q psy3769 399 IESEL-----ELVICITE-GIPVRDMLILKNKMKKNNSK-TLL 434 (974)
Q Consensus 399 ~~~gv-----~~~vi~s~-G~~e~~~~~l~~~a~~~~~g-i~v 434 (974)
+++|. |.+++=-. ....++.++|.+.|+ ++| +.+
T Consensus 129 l~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~--~~g~~~~ 169 (479)
T 2nvw_A 129 LEHSSQNLNLRYLYVEWALAASVQQAEELYSISQ--QRANLQT 169 (479)
T ss_dssp HHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHH--TCTTCEE
T ss_pred HHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHH--HcCCeEE
Confidence 99994 77655332 234556688999999 888 654
No 138
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=93.33 E-value=0.11 Score=58.03 Aligned_cols=69 Identities=7% Similarity=0.087 Sum_probs=54.1
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
.++|.+++++.+...+|++++++|+....+.+.+|+++|. ++++--. ....++.++|.+.|+ ++|+.+.
T Consensus 57 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP~a~~~~e~~~l~~~a~--~~g~~~~ 126 (362)
T 1ydw_A 57 TKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKPVAMNVTEFDKIVDACE--ANGVQIM 126 (362)
T ss_dssp CEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSSCSSSHHHHHHHHHHHH--TTTCCEE
T ss_pred CeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecCCcCCHHHHHHHHHHHH--HcCCEEE
Confidence 4789999998754479999999999999999999999994 5454221 344556788999999 8887654
No 139
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=93.31 E-value=0.1 Score=57.91 Aligned_cols=114 Identities=14% Similarity=0.089 Sum_probs=74.6
Q ss_pred cCCeEEEEEccccccCcccccchhhhhcc--CCCCceEEEEecCCCCCc----ccccc-ccccchhhhcccCCCcEEEEE
Q psy3769 313 QNNLKTILVNIFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNGQ----KFEEI-PIFDTVKNAKNETGATVSVIY 385 (974)
Q Consensus 313 ~~~~~~i~vni~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g~----~i~G~-~~y~sl~dip~~~~vDlavi~ 385 (974)
+..+++- |+|.-...|..+++.+.+. +++ .+.-+.+..... +-.|. ++|.|++++.+..++|+++|+
T Consensus 16 ~~~irvg---iIG~G~~~g~~~~~~l~~~~~~~~---lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~ 89 (340)
T 1zh8_A 16 LRKIRLG---IVGCGIAARELHLPALKNLSHLFE---ITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLT 89 (340)
T ss_dssp CCCEEEE---EECCSHHHHHTHHHHHHTTTTTEE---EEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEEC
T ss_pred CCceeEE---EEecCHHHHHHHHHHHHhCCCceE---EEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEe
Confidence 4445543 4562214566667777654 233 344455442000 12355 789999999765579999999
Q ss_pred ecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 386 VPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 386 vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+|...-.+.+.+|+++| +.+++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 90 tp~~~H~~~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~--~~g~~~~ 137 (340)
T 1zh8_A 90 LPVELNLPFIEKALRKG-VHVICEKPISTDVETGKKVVELSE--KSEKTVY 137 (340)
T ss_dssp CCGGGHHHHHHHHHHTT-CEEEEESSSSSSHHHHHHHHHHHH--HCSSCEE
T ss_pred CCchHHHHHHHHHHHCC-CcEEEeCCCCCCHHHHHHHHHHHH--HcCCeEE
Confidence 99999999999999999 45455322 234556678999999 8887643
No 140
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=93.26 E-value=0.13 Score=57.25 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=57.3
Q ss_pred ccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 361 FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 361 i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
..|.++|.|++++.+..++|+++|++|...-.+.+.+|+++| |++++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 50 ~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKPla~~~~e~~~l~~~a~--~~g~~~~ 122 (352)
T 3kux_A 50 WPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKPFTVTLSQANALKEHAD--DAGLLLS 122 (352)
T ss_dssp CSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSSCCSCHHHHHHHHHHHH--HTTCCEE
T ss_pred CCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECCCcCCHHHHHHHHHHHH--HcCCeEE
Confidence 347889999999987557999999999999999999999999 55554322 344556788999999 8887653
No 141
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=93.23 E-value=0.16 Score=55.21 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=66.6
Q ss_pred Ccccccchhhhhcc----CCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCC
Q psy3769 328 GKTGRFHTNLCLNY----GNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESEL 403 (974)
Q Consensus 328 ~k~G~~v~~~l~~~----g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv 403 (974)
+..|..+++.+.+. +++ .+....++. -.+-.|.+ |.|++++.+...+|++++++|...-.+.+.+|+++|.
T Consensus 16 G~iG~~~~~~l~~~~~~~~~~---lvav~d~~~-~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk 90 (294)
T 1lc0_A 16 GRAGSVRLRDLKDPRSAAFLN---LIGFVSRRE-LGSLDEVR-QISLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGK 90 (294)
T ss_dssp SHHHHHHHHHHTSHHHHTTEE---EEEEECSSC-CCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHhccccCCCEE---EEEEECchH-HHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCC
Confidence 44566666666541 233 233333332 12345776 6899998765579999999999999999999999995
Q ss_pred cEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 404 ELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 404 ~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
++++=-. ....++.++|.+.|+ ++|+.+
T Consensus 91 -hVl~EKPla~~~~ea~~l~~~a~--~~g~~~ 119 (294)
T 1lc0_A 91 -HVLVEYPMTLSFAAAQELWELAA--QKGRVL 119 (294)
T ss_dssp -EEEEESCSCSCHHHHHHHHHHHH--HTTCCE
T ss_pred -cEEEeCCCCCCHHHHHHHHHHHH--HhCCEE
Confidence 5555322 233456688999999 888763
No 142
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=93.01 E-value=0.12 Score=56.67 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=68.7
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC----ccccc-cccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG----QKFEE-IPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g----~~i~G-~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. +..|..+++.+.+. +++ .+..+.++... .+-.| .++|.+.+++. ...+|++++++|+....+.+.
T Consensus 6 iiG~-G~~g~~~~~~l~~~~~~~---~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~D~V~i~tp~~~h~~~~~ 80 (325)
T 2ho3_A 6 VIGT-GAISHHFIEAAHTSGEYQ---LVAIYSRKLETAATFASRYQNIQLFDQLEVFF-KSSFDLVYIASPNSLHFAQAK 80 (325)
T ss_dssp EECC-SHHHHHHHHHHHHTTSEE---EEEEECSSHHHHHHHGGGSSSCEEESCHHHHH-TSSCSEEEECSCGGGHHHHHH
T ss_pred EEeC-CHHHHHHHHHHHhCCCeE---EEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHh-CCCCCEEEEeCChHHHHHHHH
Confidence 3452 45566666666654 333 33444443200 01224 37899999987 348999999999999999999
Q ss_pred HHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 397 EAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 397 e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+|+++|. ++++-.. ....++.++|.+.|+ ++|+.+
T Consensus 81 ~al~~gk-~V~~EKP~~~~~~~~~~l~~~a~--~~g~~~ 116 (325)
T 2ho3_A 81 AALSAGK-HVILEKPAVSQPQEWFDLIQTAE--KNNCFI 116 (325)
T ss_dssp HHHHTTC-EEEEESSCCSSHHHHHHHHHHHH--HTTCCE
T ss_pred HHHHcCC-cEEEecCCcCCHHHHHHHHHHHH--HcCCEE
Confidence 9999994 5555432 344556678999999 888764
No 143
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=92.70 E-value=0.12 Score=59.29 Aligned_cols=105 Identities=14% Similarity=0.117 Sum_probs=71.0
Q ss_pred cccccCcccc-cchhhhhcc-CCCCceEEEEecCCCCC-c---cccccc-----cccchhhhcccCCCcEEEEEecchhH
Q psy3769 323 IFGITGKTGR-FHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIP-----IFDTVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 323 i~G~~~k~G~-~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~-----~y~sl~dip~~~~vDlavi~vp~~~v 391 (974)
|+|. +..|. .+++.+.+. +++ .+..+.+.... + +-.|++ +|.+++++.+...+|+++|++|....
T Consensus 88 iIG~-G~~g~~~~~~~l~~~~~~~---lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 88 IVGL-GKYALNQILPGFAGCQHSR---IEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp EECC-SHHHHHTHHHHTTTCSSEE---EEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred EECC-cHHHHHHHHHHHhhCCCcE---EEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhH
Confidence 4563 56675 667777654 333 34555554300 1 123554 79999999765579999999999999
Q ss_pred HHHHHHHHHcCCcEEEEEc-CCCChHHHHHHHHHHhcCCCCceE
Q psy3769 392 TSAIWEAIESELELVICIT-EGIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 392 ~~~v~e~~~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
.+.+.+|+++|. ++++=- -....++.++|.+.|+ ++|+.+
T Consensus 164 ~~~~~~al~aGk-~Vl~EKPla~~~~e~~~l~~~a~--~~g~~~ 204 (433)
T 1h6d_A 164 AEFAIRAFKAGK-HVMCEKPMATSVADCQRMIDAAK--AANKKL 204 (433)
T ss_dssp HHHHHHHHHTTC-EEEECSSCCSSHHHHHHHHHHHH--HHTCCE
T ss_pred HHHHHHHHHCCC-cEEEcCCCCCCHHHHHHHHHHHH--HhCCeE
Confidence 999999999995 544422 2344556678999998 778664
No 144
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=92.54 E-value=0.2 Score=52.22 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=67.7
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCC
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESEL 403 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv 403 (974)
.|.++|.|..+.+-..+.|++ .+..+.+.. . +++ . ++|++|=++.|+.+.+.++.|.+.|+
T Consensus 18 ~Ga~GrMG~~i~~~~~~~~~e---lv~~id~~~--~-----------~~l-~--~~DVvIDFT~P~a~~~~~~~~~~~g~ 78 (228)
T 1vm6_A 18 VGYSGRMGQEIQKVFSEKGHE---LVLKVDVNG--V-----------EEL-D--SPDVVIDFSSPEALPKTVDLCKKYRA 78 (228)
T ss_dssp ETTTSHHHHHHHHHHHHTTCE---EEEEEETTE--E-----------EEC-S--CCSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred EEecCHHHHHHHHHHhCCCCE---EEEEEcCCC--c-----------ccc-c--CCCEEEECCCHHHHHHHHHHHHHcCC
Confidence 577788898886654455665 455555431 1 233 2 57988889999999999999999999
Q ss_pred cEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC-Cccc
Q psy3769 404 ELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN-CPGL 442 (974)
Q Consensus 404 ~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn-c~G~ 442 (974)
+. |+-|.|+.+++.+++.+.++ + ---++.|| ++|+
T Consensus 79 ~~-ViGTTG~~~~~~~~l~~~a~--~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 79 GL-VLGTTALKEEHLQMLRELSK--E-VPVVQAYNFSIGI 114 (228)
T ss_dssp EE-EECCCSCCHHHHHHHHHHTT--T-SEEEECSCCCHHH
T ss_pred CE-EEeCCCCCHHHHHHHHHHHh--h-CCEEEeccccHHH
Confidence 85 78889999877666777665 3 23356777 4443
No 145
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=92.15 E-value=0.17 Score=56.09 Aligned_cols=72 Identities=13% Similarity=0.052 Sum_probs=56.5
Q ss_pred ccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 361 FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 361 i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
..|.++|.|++++.+...+|+++|++|...-.+.+.+|+++| +++++--. ....++.++|.+.|+ ++|+.+.
T Consensus 48 ~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~a~~~~e~~~l~~~a~--~~g~~~~ 120 (345)
T 3f4l_A 48 YSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPFTPTLAQAKELFALAK--SKGLTVT 120 (345)
T ss_dssp GTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHH--HHTCCEE
T ss_pred cCCCceECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCCCCCHHHHHHHHHHHH--HcCCeEE
Confidence 347899999999987556999999999999999999999999 55444221 334556778999999 8887653
No 146
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=92.01 E-value=0.14 Score=55.94 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=62.6
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES 401 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~ 401 (974)
|+|. +..|..+++.+.+. +++ .+..+.+.....+..|++ |.+.+++.+...+|++++++|+....+.+.+|+++
T Consensus 14 IIG~-G~iG~~~~~~l~~~~~~e---lvav~d~~~~~~~~~g~~-~~~~~~l~~~~~~DvViiatp~~~h~~~~~~al~a 88 (304)
T 3bio_A 14 IVGY-GNIGRYALQALREAPDFE---IAGIVRRNPAEVPFELQP-FRVVSDIEQLESVDVALVCSPSREVERTALEILKK 88 (304)
T ss_dssp EECC-SHHHHHHHHHHHHCTTEE---EEEEECC-------CCTT-SCEESSGGGSSSCCEEEECSCHHHHHHHHHHHHTT
T ss_pred EECC-hHHHHHHHHHHhcCCCCE---EEEEEcCCHHHHHHcCCC-cCCHHHHHhCCCCCEEEECCCchhhHHHHHHHHHc
Confidence 3452 45666677777653 343 233333332011225665 44444333223799999999999999999999999
Q ss_pred CCcEEEEEcC--CCChHHHHHHHHHHhcCCCCce-EEc
Q psy3769 402 ELELVICITE--GIPVRDMLILKNKMKKNNSKTL-LLG 436 (974)
Q Consensus 402 gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~-viG 436 (974)
|.. +++-.. +...++.++|.+.|+ ++|.. ++|
T Consensus 89 G~~-Vi~ekP~~a~~~~~~~~l~~~a~--~~g~~~~v~ 123 (304)
T 3bio_A 89 GIC-TADSFDIHDGILALRRSLGDAAG--KSGAAAVIA 123 (304)
T ss_dssp TCE-EEECCCCGGGHHHHHHHHHHHHH--HHTCEEECS
T ss_pred CCe-EEECCCCCCCCHHHHHHHHHHHH--hCCCEEEEe
Confidence 965 455432 333345578888898 77854 444
No 147
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.92 E-value=0.4 Score=51.97 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=70.3
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCc-cc--cccccccchhhhcccCCCcEEEEEecc-hhHHHHHHHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ-KF--EEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIWEAI 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~-~i--~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~e~~ 399 (974)
+| .+..|..+.+++.+.|++ |+.++++.... .. .|.....|++++.+ .|++++++|. ..+.+++++..
T Consensus 21 IG-~G~mG~~~A~~l~~~G~~----V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~~l~ 92 (296)
T 3qha_A 21 IG-LGNMGAPMATRMTEWPGG----VTVYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVGELA 92 (296)
T ss_dssp EC-CSTTHHHHHHHHTTSTTC----EEEECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHHHHH
T ss_pred EC-cCHHHHHHHHHHHHCCCe----EEEEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHHHHH
Confidence 56 467888889999999987 56666654111 11 37888899999853 8999999995 57777887766
Q ss_pred Hc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 400 ES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 400 ~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+. .-..+++-.+.......+++.+.++ ++|++++.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~--~~g~~~~~ 128 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLK--ARDIHIVD 128 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHG--GGTCEEEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHH--HcCCEEEe
Confidence 53 2334455555555455566777777 67777664
No 148
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.62 E-value=0.38 Score=53.74 Aligned_cols=70 Identities=7% Similarity=0.012 Sum_probs=55.4
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.++|.|++++.+..++|+++|++|...-.+.+.+|+++| |.+++=-. ....++.++|.+.|+ ++|+.+.
T Consensus 73 ~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~--~~g~~l~ 143 (361)
T 3u3x_A 73 DARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPGMTSFDQLAKLRRVQA--ETGRIFS 143 (361)
T ss_dssp SCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCSCSSHHHHHHHHHHHH--TTCCCEE
T ss_pred CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCCCCCHHHHHHHHHHHH--HcCCEEE
Confidence 3678999999987557999999999999999999999999 45444222 334556788999999 8887653
No 149
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.41 E-value=0.17 Score=54.49 Aligned_cols=103 Identities=12% Similarity=-0.010 Sum_probs=71.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEec-chhHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVP-AIFATSAI- 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp-~~~v~~~v- 395 (974)
|+| .+.+|..+.+++.+.|++ |+.++++. +.. .|...+.|++++.+ ..|++++++| +..+.+++
T Consensus 6 iIG-~G~mG~~~a~~l~~~G~~----V~~~dr~~--~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~ 76 (287)
T 3pef_A 6 FIG-LGIMGSAMAKNLVKAGCS----VTIWNRSP--EKAEELAALGAERAATPCEVVE--SCPVTFAMLADPAAAEEVCF 76 (287)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSSG--GGGHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEe-ecHHHHHHHHHHHHCCCe----EEEEcCCH--HHHHHHHHCCCeecCCHHHHHh--cCCEEEEEcCCHHHHHHHHc
Confidence 456 467888888999988876 66777764 322 37888899999876 7899999999 56777777
Q ss_pred --HHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 --WEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 --~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++..+. .-..+++-.++......+++.+.++ ++|++++.
T Consensus 77 ~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~--~~g~~~~~ 118 (287)
T 3pef_A 77 GKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVV--AKGGRFLE 118 (287)
T ss_dssp STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred CcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHH--HhCCEEEE
Confidence 554432 2334455556655555566777777 67777664
No 150
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.76 E-value=0.22 Score=55.83 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=72.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhccc-CCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNE-TGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~-~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+..|..+.++|.+.|++ |..+|+.. +.. .|...+.|++|+.+. ..+|++++++|+..+.++++
T Consensus 27 iIG-lG~mG~~~A~~L~~~G~~----V~v~dr~~--~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~ 99 (358)
T 4e21_A 27 MIG-LGRMGADMVRRLRKGGHE----CVVYDLNV--NAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQ 99 (358)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHH
T ss_pred EEC-chHHHHHHHHHHHhCCCE----EEEEeCCH--HHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHH
Confidence 356 467888899999999976 66777764 222 377888899987641 24599999999998888887
Q ss_pred HHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 EAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+.... .-..+++-.+........++.+.++ ++|+++++
T Consensus 100 ~l~~~l~~g~iiId~st~~~~~~~~~~~~l~--~~g~~~vd 138 (358)
T 4e21_A 100 RMTPLLAANDIVIDGGNSHYQDDIRRADQMR--AQGITYVD 138 (358)
T ss_dssp HHGGGCCTTCEEEECSSCCHHHHHHHHHHHH--TTTCEEEE
T ss_pred HHHhhCCCCCEEEeCCCCChHHHHHHHHHHH--HCCCEEEe
Confidence 76553 2234444444444444556667777 78888765
No 151
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.66 E-value=0.31 Score=53.53 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=69.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecc-hhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~ 396 (974)
|+| .|..|..+.+++.+.|++ |+.+++.. +.. .|...+.|++++.+ ..|++++++|. ..+.+++.
T Consensus 36 iIG-~G~mG~~~a~~l~~~G~~----V~~~dr~~--~~~~~l~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v~~ 106 (320)
T 4dll_A 36 FLG-TGSMGLPMARRLCEAGYA----LQVWNRTP--ARAASLAALGATIHEQARAAAR--DADIVVSMLENGAVVQDVLF 106 (320)
T ss_dssp EEC-CTTTHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHTTTCEEESSHHHHHT--TCSEEEECCSSHHHHHHHHT
T ss_pred EEC-ccHHHHHHHHHHHhCCCe----EEEEcCCH--HHHHHHHHCCCEeeCCHHHHHh--cCCEEEEECCCHHHHHHHHc
Confidence 356 367888888999988886 66777764 221 37888899999876 79999999995 56666664
Q ss_pred --HHHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 --EAIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 --e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+..+ ..-+.+++-.+.......+++.+.++ +.|++++.
T Consensus 107 ~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~--~~g~~~~~ 147 (320)
T 4dll_A 107 AQGVAAAMKPGSLFLDMASITPREARDHAARLG--ALGIAHLD 147 (320)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred chhHHhhCCCCCEEEecCCCCHHHHHHHHHHHH--HcCCEEEe
Confidence 3333 23334455555554455566667777 67777664
No 152
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.64 E-value=0.47 Score=51.02 Aligned_cols=88 Identities=18% Similarity=0.091 Sum_probs=63.5
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc------ccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK------FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~------i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
+|. +.+|..+.+.+.+.|++. ..|+.++++. +. -.|+.++.+..++.+ ..|++++++|+..+.+++++
T Consensus 9 IG~-G~mG~aia~~l~~~g~~~-~~V~v~dr~~--~~~~~l~~~~gi~~~~~~~~~~~--~aDvVilav~p~~~~~vl~~ 82 (280)
T 3tri_A 9 IGG-GNMARNIVVGLIANGYDP-NRICVTNRSL--DKLDFFKEKCGVHTTQDNRQGAL--NADVVVLAVKPHQIKMVCEE 82 (280)
T ss_dssp ESC-SHHHHHHHHHHHHTTCCG-GGEEEECSSS--HHHHHHHHTTCCEEESCHHHHHS--SCSEEEECSCGGGHHHHHHH
T ss_pred Ecc-cHHHHHHHHHHHHCCCCC-CeEEEEeCCH--HHHHHHHHHcCCEEeCChHHHHh--cCCeEEEEeCHHHHHHHHHH
Confidence 563 678888889999888832 1377777764 22 138888888888765 78999999999999999988
Q ss_pred HHHc--CCc-EEEEEcCCCChHH
Q psy3769 398 AIES--ELE-LVICITEGIPVRD 417 (974)
Q Consensus 398 ~~~~--gv~-~~vi~s~G~~e~~ 417 (974)
.... .-+ .++-+++|++.+.
T Consensus 83 l~~~~l~~~~iiiS~~agi~~~~ 105 (280)
T 3tri_A 83 LKDILSETKILVISLAVGVTTPL 105 (280)
T ss_dssp HHHHHHTTTCEEEECCTTCCHHH
T ss_pred HHhhccCCCeEEEEecCCCCHHH
Confidence 7653 334 4444568887543
No 153
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=90.63 E-value=0.92 Score=51.36 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=70.3
Q ss_pred CCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEE-ccCCCchHHHHHHHHh
Q psy3769 461 GRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIG-EIGGLDEIYAANWIKK 539 (974)
Q Consensus 461 G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~-E~~g~~~~~~~~f~~~ 539 (974)
|+|+.++-+|+++...++.+...|.-..-++-+|+.+ ..-.+.+.++.+..||+.++|++-+ -++-+-+.-++...++
T Consensus 264 G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a-~~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii~a 342 (395)
T 2fp4_B 264 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGV-KESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKA 342 (395)
T ss_dssp SSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSC-CHHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHHHH
T ss_pred CeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCC-CHHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHHHH
Confidence 8999999999999999999999998888999999886 3455677899999999999999854 3331111233444444
Q ss_pred ----cCCCCEEEEecccC
Q psy3769 540 ----NMKKPVIGFIAGIT 553 (974)
Q Consensus 540 ----~~~KPVv~lk~Grs 553 (974)
..+||||+--.|..
T Consensus 343 ~~~~~~~~Pivvrl~G~n 360 (395)
T 2fp4_B 343 CRELELKVPLVVRLEGTN 360 (395)
T ss_dssp HHHHTCCSCEEEEEEETT
T ss_pred HHhcCCCCeEEEEcCCCC
Confidence 36899999766654
No 154
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=90.44 E-value=0.25 Score=56.90 Aligned_cols=109 Identities=14% Similarity=0.094 Sum_probs=70.3
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCCCCC-cc------ccc---ccccc----chhhhcccCCCcEEEEEec
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPKKNG-QK------FEE---IPIFD----TVKNAKNETGATVSVIYVP 387 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~~~g-~~------i~G---~~~y~----sl~dip~~~~vDlavi~vp 387 (974)
|+| .+..|..+++.+.+. +++ .+..+.+.... ++ -.| .++|. |++++.+...+|+++|++|
T Consensus 25 iIG-~G~~g~~h~~~l~~~~~~~---lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 25 FIA-VGLRGQTHVENMARRDDVE---IVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEC-CSHHHHHHHHHHHTCTTEE---EEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred EEe-cCHHHHHHHHHHHhCCCcE---EEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 345 344556666666643 343 33444443200 11 124 57898 9999986557999999999
Q ss_pred chhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE-EccC
Q psy3769 388 AIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL-LGPN 438 (974)
Q Consensus 388 ~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v-iGPn 438 (974)
...-.+.+.+|+++|. ++++=-. ....++.++|.+.|+ ++|..+ +|-|
T Consensus 101 ~~~h~~~~~~al~aGk-hV~~EKP~a~~~~ea~~l~~~a~--~~g~~~~v~~~ 150 (444)
T 2ixa_A 101 WEWHHEHGVAAMKAGK-IVGMEVSGAITLEECWDYVKVSE--QTGVPLMALEN 150 (444)
T ss_dssp GGGHHHHHHHHHHTTC-EEEECCCCCSSHHHHHHHHHHHH--HHCCCEEECCG
T ss_pred cHHHHHHHHHHHHCCC-eEEEeCCCcCCHHHHHHHHHHHH--HhCCeEEEEec
Confidence 9999999999999994 5444211 233456678999998 788764 4544
No 155
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.31 E-value=0.62 Score=50.61 Aligned_cols=105 Identities=13% Similarity=0.060 Sum_probs=67.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-Ccc--ccccccccchhhhcccCCCcEEEEEecchhHH-HHHH-H
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQK--FEEIPIFDTVKNAKNETGATVSVIYVPAIFAT-SAIW-E 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~--i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~-~~v~-e 397 (974)
++| .+..|.-+.++|++.||+ |+..|+... -+. -.|.....|++|+.+ ..|++++++|..... +++. +
T Consensus 10 fIG-LG~MG~~mA~~L~~~G~~----V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~~dvvi~~l~~~~~~~~v~~~~ 82 (297)
T 4gbj_A 10 FLG-LGNLGTPIAEILLEAGYE----LVVWNRTASKAEPLTKLGATVVENAIDAIT--PGGIVFSVLADDAAVEELFSME 82 (297)
T ss_dssp EEC-CSTTHHHHHHHHHHTTCE----EEEC-------CTTTTTTCEECSSGGGGCC--TTCEEEECCSSHHHHHHHSCHH
T ss_pred EEe-cHHHHHHHHHHHHHCCCe----EEEEeCCHHHHHHHHHcCCeEeCCHHHHHh--cCCceeeeccchhhHHHHHHHH
Confidence 345 357888899999999997 444454320 111 238888899999976 899999999976543 3332 2
Q ss_pred HHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 398 AIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 398 ~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
... ..-..++|-.+-...+..+++.+.++ ++|++++.
T Consensus 83 ~~~~~~~~~iiid~sT~~p~~~~~~~~~~~--~~g~~~ld 120 (297)
T 4gbj_A 83 LVEKLGKDGVHVSMSTISPETSRQLAQVHE--WYGAHYVG 120 (297)
T ss_dssp HHHHHCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred HHhhcCCCeEEEECCCCChHHHHHHHHHHH--hcCCceec
Confidence 222 23334555555555555677888888 88988874
No 156
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.30 E-value=0.21 Score=54.43 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=69.1
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchh-HHHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAIW- 396 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~- 396 (974)
+| .+..|..+.++|.+.|++ |+.+|++. +.. .|...+.|++++.+ ..|++++++|... +.+++.
T Consensus 15 IG-~G~mG~~~A~~l~~~G~~----V~~~dr~~--~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 15 IG-LGAMGTIMAQVLLKQGKR----VAIWNRSP--GKAAALVAAGAHLCESVKAALS--ASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp EC-CSHHHHHHHHHHHHTTCC----EEEECSSH--HHHHHHHHHTCEECSSHHHHHH--HSSEEEECCSSHHHHHHHHTS
T ss_pred EC-CCHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHCCCeecCCHHHHHh--cCCEEEEEeCCHHHHHHHhcc
Confidence 46 467888889999999987 66667664 222 27778899999876 7899999999764 666664
Q ss_pred -HHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 -EAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 -e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
......-..+++-.+.......+++.+.++ +.|++++.
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~--~~g~~~vd 124 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVN--QAGGHYVK 124 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHH--HTTCEEEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHH--HcCCeEEe
Confidence 332222334455455554445566677777 77887764
No 157
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=90.23 E-value=0.31 Score=53.90 Aligned_cols=68 Identities=12% Similarity=0.170 Sum_probs=52.9
Q ss_pred cc-ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE
Q psy3769 363 EI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 363 G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+ ++|.|++|+-+...+|+++|++|...-.+.+.+|+++| |++++ -- ....++.++|.+.|+ ++|+.+
T Consensus 70 g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~-EKPla~~~~ea~~l~~~a~--~~~~~l 140 (350)
T 4had_A 70 SVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVC-EKPLALKAGDIDAVIAARD--RNKVVV 140 (350)
T ss_dssp TCSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEE-CSCCCSSGGGGHHHHHHHH--HHTCCE
T ss_pred CCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEE-eCCcccchhhHHHHHHHHH--HcCCce
Confidence 55 48999999876568999999999999999999999999 45333 32 233445678899998 888654
No 158
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=89.70 E-value=0.33 Score=54.17 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=54.3
Q ss_pred cccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 362 EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 362 ~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
.+.++|.|++++.+..++|+++|++|...-.+.+.+|+++|. .+++=-. ....++.++|.+.|+ ++|+.+
T Consensus 52 ~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPla~~~~e~~~l~~~a~--~~g~~~ 122 (359)
T 3m2t_A 52 SDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKPPCATLEELETLIDAAR--RSDVVS 122 (359)
T ss_dssp CSCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSCSCSSHHHHHHHHHHHH--HHTCCE
T ss_pred CCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECCCcCCHHHHHHHHHHHH--HcCCEE
Confidence 367889999999865579999999999999999999999994 4443211 334456678899998 778654
No 159
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.58 E-value=0.34 Score=52.14 Aligned_cols=103 Identities=10% Similarity=-0.020 Sum_probs=69.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecch-hHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI- 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v- 395 (974)
++| .+..|..+.+++.+.|++ |+.++++. +.. .|.....|++++.+ ..|++++++|.. .+.+++
T Consensus 6 iiG-~G~mG~~~a~~l~~~G~~----V~~~dr~~--~~~~~~~~~g~~~~~~~~~~~~--~advvi~~v~~~~~~~~v~~ 76 (287)
T 3pdu_A 6 FLG-LGIMGGPMAANLVRAGFD----VTVWNRNP--AKCAPLVALGARQASSPAEVCA--ACDITIAMLADPAAAREVCF 76 (287)
T ss_dssp EEC-CSTTHHHHHHHHHHHTCC----EEEECSSG--GGGHHHHHHTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEc-cCHHHHHHHHHHHHCCCe----EEEEcCCH--HHHHHHHHCCCeecCCHHHHHH--cCCEEEEEcCCHHHHHHHHc
Confidence 356 567888889999999987 66667664 222 27788889999876 789999999986 666666
Q ss_pred --HHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 --WEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 --~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++..+. .-+.+++-.+.......+++.+.++ ++|++++.
T Consensus 77 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~--~~g~~~~~ 118 (287)
T 3pdu_A 77 GANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVT--ARGGRFLE 118 (287)
T ss_dssp STTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred CchhhhhcccCCCEEEECCCCCHHHHHHHHHHHH--HcCCEEEE
Confidence 444332 2234455555554444556667777 67777664
No 160
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=89.43 E-value=1.4 Score=49.78 Aligned_cols=92 Identities=18% Similarity=0.263 Sum_probs=70.0
Q ss_pred CCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCc--hHHHHHHH
Q psy3769 460 KGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLD--EIYAANWI 537 (974)
Q Consensus 460 ~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~--~~~~~~f~ 537 (974)
.|+|+.++-+|+++...++.+...|.-..-++-+|+.+ ..-.+.+.++.+..||+.++|++.+=+ |.. +.-++..+
T Consensus 256 ~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a-~~~~~~~~~~~il~d~~v~~ilvni~g-gi~~~~~vA~gii 333 (388)
T 2nu8_B 256 DGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGA-TKERVTEAFKIILSDDKVKAVLVNIFG-GIVRCDLIADGII 333 (388)
T ss_dssp SSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCC-CHHHHHHHHHHHHTSTTCCEEEEEEES-CSSCHHHHHHHHH
T ss_pred CCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCC-CHHHHHHHHHHHhcCCCCCEEEEEecC-CcCCchHHHHHHH
Confidence 38999999999999999999999998888999999886 345567788888999999999997621 222 12233344
Q ss_pred Hh----cCCCCEEEEecccC
Q psy3769 538 KK----NMKKPVIGFIAGIT 553 (974)
Q Consensus 538 ~~----~~~KPVv~lk~Grs 553 (974)
++ ..+||||+-..|..
T Consensus 334 ~a~~~~~~~~pivvrl~G~n 353 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGNN 353 (388)
T ss_dssp HHHHHHTCCSCEEEEEESTT
T ss_pred HHHHhcCCCCeEEEEeCCCC
Confidence 44 36899999666654
No 161
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=89.41 E-value=0.5 Score=52.70 Aligned_cols=68 Identities=12% Similarity=0.062 Sum_probs=53.7
Q ss_pred cc-ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE
Q psy3769 363 EI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 363 G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|+ ++|.|.+|+-+...+|+++|++|...-.+.+.+|+++|. ++ ++-- ....++.++|++.|+ ++|+.+
T Consensus 78 g~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGk-hV-l~EKPla~~~~ea~~l~~~a~--~~g~~l 148 (393)
T 4fb5_A 78 GFEKATADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGK-HV-WCEKPMAPAYADAERMLATAE--RSGKVA 148 (393)
T ss_dssp TCSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EE-EECSCSCSSHHHHHHHHHHHH--HSSSCE
T ss_pred CCCeecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCC-eE-EEccCCcccHHHHHHhhhhHH--hcCCcc
Confidence 55 489999999866689999999999999999999999994 43 3332 234456778999999 888754
No 162
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.95 E-value=0.42 Score=51.44 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=65.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEec-chhHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVP-AIFATSAI- 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp-~~~v~~~v- 395 (974)
|+| .+..|..+.+.+.+.|++ |+.++++. +.. .|+..+.+++++.+ ..|++++++| +..+.+++
T Consensus 10 iiG-~G~~G~~~a~~l~~~g~~----V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~~~~~ 80 (299)
T 1vpd_A 10 FIG-LGIMGKPMSKNLLKAGYS----LVVSDRNP--EAIADVIAAGAETASTAKAIAE--QCDVIITMLPNSPHVKEVAL 80 (299)
T ss_dssp EEC-CSTTHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEC-chHHHHHHHHHHHhCCCE----EEEEeCCH--HHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHHh
Confidence 467 577888888888888875 66676653 211 27788889888765 6899999999 55667676
Q ss_pred --HHHHH---cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 --WEAIE---SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 --~e~~~---~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++..+ .|. .++-++.|.+ ...+++.+.+. +.|+.++.
T Consensus 81 ~~~~l~~~l~~~~-~vv~~s~~~~-~~~~~l~~~~~--~~g~~~~~ 122 (299)
T 1vpd_A 81 GENGIIEGAKPGT-VLIDMSSIAP-LASREISDALK--AKGVEMLD 122 (299)
T ss_dssp STTCHHHHCCTTC-EEEECSCCCH-HHHHHHHHHHH--TTTCEEEE
T ss_pred CcchHhhcCCCCC-EEEECCCCCH-HHHHHHHHHHH--HcCCeEEE
Confidence 33322 332 3344445544 33455667777 66777664
No 163
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=88.80 E-value=0.8 Score=50.51 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=70.6
Q ss_pred cccc--chhhhcccCCCcEEEEEecchh----HHHHHHHHHHcCCcEEEEEcCC-CChHHHHHHHHHHhcCCCCceEEcc
Q psy3769 365 PIFD--TVKNAKNETGATVSVIYVPAIF----ATSAIWEAIESELELVICITEG-IPVRDMLILKNKMKKNNSKTLLLGP 437 (974)
Q Consensus 365 ~~y~--sl~dip~~~~vDlavi~vp~~~----v~~~v~e~~~~gv~~~vi~s~G-~~e~~~~~l~~~a~~~~~gi~viGP 437 (974)
+.|. +++++-+..++|++++++|... +.+.+.+|+++|.. +++-.-+ ++ ....+|.+.|+ ++|.++.-.
T Consensus 65 ~~~~~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkh-Vv~~NKkpla-~~~~eL~~~A~--~~g~~~~~e 140 (327)
T 3do5_A 65 MLRDDAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKH-VVTSNKGPLV-AEFHGLMSLAE--RNGVRLMYE 140 (327)
T ss_dssp SCSBCCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCE-EEECCSHHHH-HHHHHHHHHHH--HTTCCEECG
T ss_pred cccCCCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCe-EEecCchhhH-HHHHHHHHHHH--hhCCcEEEE
Confidence 4565 8888876557999999999875 47889999999955 3442212 22 23468899999 999887744
Q ss_pred CCccccccCccccccCCCCCCCCCCEEEEe--CChhhHHHHHHHHHHcCCceEEE
Q psy3769 438 NCPGLIVPEEIKIGIMPGNIHKKGRIGVVS--RSGTLTYEVVCQLTELGFGQSSA 490 (974)
Q Consensus 438 nc~G~~~~~~~~~~~~~~~~~~~G~va~vS--QSG~~~~~~~~~~~~~g~g~s~~ 490 (974)
-+.|-..|.-...- .....+.|.=|. .||+..+ ++....+.|..|+.+
T Consensus 141 a~v~~g~Pii~~l~----~~l~~~~I~~I~GIlnGT~ny-ilt~m~~~g~~f~~~ 190 (327)
T 3do5_A 141 ATVGGAMPVVKLAK----RYLALCEIESVKGIFNGTCNY-ILSRMEEERLPYEHI 190 (327)
T ss_dssp GGSSTTSCCHHHHH----TTTTTSCEEEEEEECCHHHHH-HHHHHHHHCCCHHHH
T ss_pred EEeeecCHHHHHHH----HHhhCCCccEEEEEECCCcCc-chhhcCcCCcCHHHH
Confidence 44433334311100 112335666555 3888655 444444456655543
No 164
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.40 E-value=0.55 Score=54.91 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=67.9
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc----------cccccccchhhhccc-CCCcEEEEEecc-hhH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF----------EEIPIFDTVKNAKNE-TGATVSVIYVPA-IFA 391 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i----------~G~~~y~sl~dip~~-~~vDlavi~vp~-~~v 391 (974)
+| .+.+|..+..+|.+.||+ |+..|+.. +.+ .|+....|++++.+. ..+|+++++||+ ..+
T Consensus 16 IG-lG~MG~~lA~~La~~G~~----V~v~dr~~--~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 16 IG-LAVMGQNLILNAADHGFT----VCAYNRTQ--SKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp EC-CSHHHHHHHHHHHHTTCC----EEEECSSS--HHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred Ee-eHHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 45 456888888999999987 66677654 221 367778899887651 138999999999 578
Q ss_pred HHHHHHHHHc-CCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 392 TSAIWEAIES-ELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 392 ~~~v~e~~~~-gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
.+++++.... .-..+|+ .+.+.+ ....++.+.++ +.|+++++
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~~~~-~~~~~l~~~l~--~~g~~~v~ 132 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGNSHF-PDSNRRYEELK--KKGILFVG 132 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHHH--HTTCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCh-hHHHHHHHHHH--HcCCceeC
Confidence 8888776543 2223333 344443 33444556666 66888774
No 165
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=88.37 E-value=0.57 Score=53.12 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=54.0
Q ss_pred cc-ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 363 EI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 363 G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
|. ++|.|.+++.+...+|+++|++|...-.+.+.+|+++| |++++=-. ....++.++|++.|+ ++|..+
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~a~~~~ea~~l~~~a~--~~g~~~ 150 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPLAVNEQQAQEMAQAAR--RAGVKT 150 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCSCSSHHHHHHHHHHHH--HHTCCE
T ss_pred CCCeEECCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCCcCCHHHHHHHHHHHH--HhCCee
Confidence 44 58999999986668999999999999999999999999 45444222 334556778999998 788654
No 166
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.94 E-value=0.83 Score=48.96 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=64.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEec-CCCCCccc--cccccccchhhhcccCCCcEEEEEecchh-HHHHHH--
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVN-PKKNGQKF--EEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAIW-- 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVn-P~~~g~~i--~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~-- 396 (974)
|+| .+..|..+.+.+.+.|++ |+.++ |.. -+.+ .|+..+.+++++.+ ..|++++++|... +.+++.
T Consensus 8 iiG-~G~~G~~~a~~l~~~g~~----V~~~~~~~~-~~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~~~~ 79 (295)
T 1yb4_A 8 FIG-LGIMGSPMAINLARAGHQ----LHVTTIGPV-ADELLSLGAVNVETARQVTE--FADIIFIMVPDTPQVEDVLFGE 79 (295)
T ss_dssp ECC-CSTTHHHHHHHHHHTTCE----EEECCSSCC-CHHHHTTTCBCCSSHHHHHH--TCSEEEECCSSHHHHHHHHHST
T ss_pred EEc-cCHHHHHHHHHHHhCCCE----EEEEcCHHH-HHHHHHcCCcccCCHHHHHh--cCCEEEEECCCHHHHHHHHhCc
Confidence 467 567888888888888876 44444 332 1111 27778889988765 7999999998776 566665
Q ss_pred -HHHH-cCCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 -EAIE-SELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 -e~~~-~gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+..+ ..-..+++ ++.+.+ ...+++.+.++ ++|++++.
T Consensus 80 ~~l~~~l~~~~~vv~~s~~~~-~~~~~l~~~~~--~~g~~~~~ 119 (295)
T 1yb4_A 80 HGCAKTSLQGKTIVDMSSISP-IETKRFAQRVN--EMGADYLD 119 (295)
T ss_dssp TSSTTSCCTTEEEEECSCCCH-HHHHHHHHHHH--TTTEEEEE
T ss_pred hhHhhcCCCCCEEEECCCCCH-HHHHHHHHHHH--HcCCeEEE
Confidence 2222 12233333 344432 33456677777 67777763
No 167
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.93 E-value=0.94 Score=49.56 Aligned_cols=97 Identities=10% Similarity=0.020 Sum_probs=65.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----ccc--ccccchhh-hcccCCCcEEEEEecchhHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEI--PIFDTVKN-AKNETGATVSVIYVPAIFATSA 394 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~--~~y~sl~d-ip~~~~vDlavi~vp~~~v~~~ 394 (974)
|+| .|..|..+.+.+.+.|+.. .|+.++++. +.. .|. ..+.++++ +.+ ..|++++++|+..+.++
T Consensus 38 IIG-~G~mG~slA~~l~~~G~~~--~V~~~dr~~--~~~~~a~~~G~~~~~~~~~~~~~~~--~aDvVilavp~~~~~~v 110 (314)
T 3ggo_A 38 IVG-VGFMGGSFAKSLRRSGFKG--KIYGYDINP--ESISKAVDLGIIDEGTTSIAKVEDF--SPDFVMLSSPVRTFREI 110 (314)
T ss_dssp EES-CSHHHHHHHHHHHHTTCCS--EEEEECSCH--HHHHHHHHTTSCSEEESCTTGGGGG--CCSEEEECSCGGGHHHH
T ss_pred EEe-eCHHHHHHHHHHHhCCCCC--EEEEEECCH--HHHHHHHHCCCcchhcCCHHHHhhc--cCCEEEEeCCHHHHHHH
Confidence 457 5678888899999999854 588888874 221 244 45677887 655 79999999999999999
Q ss_pred HHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 395 IWEAIES-ELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 395 v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+++.... .-..+++-.++....-.+++.+...
T Consensus 111 l~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~ 143 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQGSVKGKLVYDLENILG 143 (314)
T ss_dssp HHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG
T ss_pred HHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC
Confidence 9888763 4445444444444333344444443
No 168
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=87.91 E-value=0.49 Score=53.05 Aligned_cols=69 Identities=10% Similarity=0.002 Sum_probs=54.6
Q ss_pred ccc-ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE
Q psy3769 362 EEI-PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 362 ~G~-~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
.|. ++|.|++++.+...+|+++|++|...-.+.+.+|+++| |+++ +-- +...++.++|.+.|+ ++|+.+
T Consensus 66 ~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~-~EKP~a~~~~~~~~l~~~a~--~~~~~~ 137 (383)
T 3oqb_A 66 FNIARWTTDLDAALADKNDTMFFDAATTQARPGLLTQAINAG-KHVY-CEKPIATNFEEALEVVKLAN--SKGVKH 137 (383)
T ss_dssp TTCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEE-ECSCSCSSHHHHHHHHHHHH--HTTCCE
T ss_pred hCCCcccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEE-EcCCCCCCHHHHHHHHHHHH--HcCCeE
Confidence 477 48999999987567999999999999999999999999 4544 322 344556788999999 888753
No 169
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=87.82 E-value=0.72 Score=52.55 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=52.6
Q ss_pred ccccchhhhccc-----CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceE
Q psy3769 365 PIFDTVKNAKNE-----TGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 365 ~~y~sl~dip~~-----~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
++|.|++++.+. ..+|+++|++|...-.+.+.+|+++|. ++++=-. ....++.++|.+.|+ ++|+.+
T Consensus 92 ~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKPla~~~~ea~~l~~~a~--~~g~~~ 164 (417)
T 3v5n_A 92 RVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKPLTSTLADAKKLKKAAD--ESDALF 164 (417)
T ss_dssp GBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESSSCSSHHHHHHHHHHHH--HCSSCE
T ss_pred cccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECCCcCCHHHHHHHHHHHH--HcCCEE
Confidence 689999998764 469999999999999999999999994 4444222 344556778999999 888754
No 170
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=87.80 E-value=0.77 Score=50.18 Aligned_cols=103 Identities=7% Similarity=0.002 Sum_probs=62.7
Q ss_pred cccccCcccc-cchhhhhcc-CCCCceEEEEecCCCCC-c---ccccccc-ccc-hhhhcccCCCcEEEEEecchhHHHH
Q psy3769 323 IFGITGKTGR-FHTNLCLNY-GNGKKAFVAGVNPKKNG-Q---KFEEIPI-FDT-VKNAKNETGATVSVIYVPAIFATSA 394 (974)
Q Consensus 323 i~G~~~k~G~-~v~~~l~~~-g~~g~~~V~pVnP~~~g-~---~i~G~~~-y~s-l~dip~~~~vDlavi~vp~~~v~~~ 394 (974)
|+|. +..|. .+++.+.+. +++ .+ .+.++... + +-.|.+. |.+ .+.+ ...+|++++++|+....+.
T Consensus 7 iIG~-G~ig~~~~~~~l~~~~~~~---l~-v~d~~~~~~~~~a~~~g~~~~~~~~~~~l--~~~~D~V~i~tp~~~h~~~ 79 (323)
T 1xea_A 7 MIGL-GDIAQKAYLPVLAQWPDIE---LV-LCTRNPKVLGTLATRYRVSATCTDYRDVL--QYGVDAVMIHAATDVHSTL 79 (323)
T ss_dssp EECC-CHHHHHTHHHHHTTSTTEE---EE-EECSCHHHHHHHHHHTTCCCCCSSTTGGG--GGCCSEEEECSCGGGHHHH
T ss_pred EECC-CHHHHHHHHHHHHhCCCce---EE-EEeCCHHHHHHHHHHcCCCccccCHHHHh--hcCCCEEEEECCchhHHHH
Confidence 3452 45555 355666543 333 33 44444200 0 1235553 444 4444 2379999999999999999
Q ss_pred HHHHHHcCCcEEEEEc-CCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 395 IWEAIESELELVICIT-EGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 395 v~e~~~~gv~~~vi~s-~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.+|+++|.. +++=- .....++.++|.+.|+ ++|+.+.
T Consensus 80 ~~~al~~Gk~-V~~EKP~~~~~~~~~~l~~~a~--~~g~~~~ 118 (323)
T 1xea_A 80 AAFFLHLGIP-TFVDKPLAASAQECENLYELAE--KHHQPLY 118 (323)
T ss_dssp HHHHHHTTCC-EEEESCSCSSHHHHHHHHHHHH--HTTCCEE
T ss_pred HHHHHHCCCe-EEEeCCCcCCHHHHHHHHHHHH--hcCCeEE
Confidence 9999999954 34422 2334556678999999 8887654
No 171
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.80 E-value=0.7 Score=49.54 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=66.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----ccc--ccccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEI--PIFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~--~~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .|..|..+.+.+.+.|+.- .|+.++++. +.. .|. ..+.+++++.+ ..|++++++|+....+++
T Consensus 11 iIG-~G~mG~~~a~~l~~~g~~~--~V~~~d~~~--~~~~~~~~~g~~~~~~~~~~~~~~--~aDvVilavp~~~~~~v~ 83 (290)
T 3b1f_A 11 IAG-LGLIGASLALGIKRDHPHY--KIVGYNRSD--RSRDIALERGIVDEATADFKVFAA--LADVIILAVPIKKTIDFI 83 (290)
T ss_dssp EEC-CSHHHHHHHHHHHHHCTTS--EEEEECSSH--HHHHHHHHTTSCSEEESCTTTTGG--GCSEEEECSCHHHHHHHH
T ss_pred EEe-eCHHHHHHHHHHHhCCCCc--EEEEEcCCH--HHHHHHHHcCCcccccCCHHHhhc--CCCEEEEcCCHHHHHHHH
Confidence 456 5678888888888775422 577777763 221 344 35667777654 789999999999999999
Q ss_pred HHHHHc--CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 WEAIES--ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 ~e~~~~--gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++.... .-+.+++..++......+++.+... +.+.++++
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~--~~~~~~v~ 124 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLK--DKPVQFVG 124 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHT--TSSCEEEE
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhcc--ccCCEEEE
Confidence 887653 2344444444444333344555554 34778775
No 172
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.75 E-value=0.51 Score=50.99 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=68.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecc-hhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~ 396 (974)
|+| .+..|..+.+++.+.|++ |+.++++. +.. .|...+.+.+++.+ ..|++++++|. ..+.+++.
T Consensus 8 iiG-~G~mG~~~a~~l~~~G~~----V~~~d~~~--~~~~~~~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~ 78 (302)
T 2h78_A 8 FIG-LGHMGAPMATNLLKAGYL----LNVFDLVQ--SAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYL 78 (302)
T ss_dssp EEC-CSTTHHHHHHHHHHTTCE----EEEECSSH--HHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHHHH
T ss_pred EEe-ecHHHHHHHHHHHhCCCe----EEEEcCCH--HHHHHHHHCCCeEcCCHHHHHh--CCCeEEEECCCHHHHHHHHc
Confidence 356 467888888999988876 67777764 222 37888899999876 78999999984 45666665
Q ss_pred ---HHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 ---EAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 ---e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+..+. .-..+++-.+.......+++.+.++ ++|++++.
T Consensus 79 ~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~--~~g~~~~~ 120 (302)
T 2h78_A 79 DDDGLLAHIAPGTLVLECSTIAPTSARKIHAAAR--ERGLAMLD 120 (302)
T ss_dssp SSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHH--HTTCCEEE
T ss_pred CchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHH--HcCCEEEE
Confidence 44332 2233444444444444456667776 66777653
No 173
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.68 E-value=0.47 Score=55.20 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=67.8
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---c------cccccccchhhhccc-CCCcEEEEEecc-hhHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---F------EEIPIFDTVKNAKNE-TGATVSVIYVPA-IFAT 392 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i------~G~~~y~sl~dip~~-~~vDlavi~vp~-~~v~ 392 (974)
+| .+.+|..+..+|.+.|++ |...|+.. +. + .|+....|++++.+. .++|+++++||+ ..+.
T Consensus 21 IG-lG~MG~~lA~~La~~G~~----V~v~~r~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 93 (480)
T 2zyd_A 21 VG-MAVMGRNLALNIESRGYT----VSIFNRSR--EKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTD 93 (480)
T ss_dssp EC-CSHHHHHHHHHHHTTTCC----EEEECSSH--HHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHH
T ss_pred Ec-cHHHHHHHHHHHHhCCCe----EEEEeCCH--HHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHH
Confidence 46 457888888999999987 66677653 21 1 167788899887651 138999999999 5788
Q ss_pred HHHHHHHHc-CCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 393 SAIWEAIES-ELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 393 ~~v~e~~~~-gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+++++.... .-..+|+ .+.|.+. +..++.+.++ +.|+++++
T Consensus 94 ~vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~~~l~--~~g~~~v~ 136 (480)
T 2zyd_A 94 AAIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRNRELS--AEGFNFIG 136 (480)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHH--HTTCEEEE
T ss_pred HHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHH--HCCCCeeC
Confidence 888876543 2223333 3445543 3344556666 66888763
No 174
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.25 E-value=0.57 Score=51.16 Aligned_cols=106 Identities=9% Similarity=-0.054 Sum_probs=71.7
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCC--CCCc---cccccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPK--KNGQ---KFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~--~~g~---~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+| .+..|..+.++|.+.|+. .|+.++++ .... .-.|...+.|++++.+ ..|++++++|+....+++++
T Consensus 29 iIG-~G~mG~~~A~~L~~~G~~---~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~--~aDvVi~~vp~~~~~~~~~~ 102 (312)
T 3qsg_A 29 FIG-FGEAASAIASGLRQAGAI---DMAAYDAASAESWRPRAEELGVSCKASVAEVAG--ECDVIFSLVTAQAALEVAQQ 102 (312)
T ss_dssp EEC-CSHHHHHHHHHHHHHSCC---EEEEECSSCHHHHHHHHHHTTCEECSCHHHHHH--HCSEEEECSCTTTHHHHHHH
T ss_pred EEC-ccHHHHHHHHHHHHCCCC---eEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHh--cCCEEEEecCchhHHHHHHh
Confidence 356 467888889999999984 47777774 1001 1247888889998866 78999999999998888877
Q ss_pred HHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCC--CceEEc
Q psy3769 398 AIES-ELELVICITEGIPVRDMLILKNKMKKNNS--KTLLLG 436 (974)
Q Consensus 398 ~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~--gi~viG 436 (974)
..+. .-+.+++-.+.......+++.+.++ +. |++++.
T Consensus 103 l~~~l~~~~ivvd~st~~~~~~~~~~~~~~--~~~~g~~~vd 142 (312)
T 3qsg_A 103 AGPHLCEGALYADFTSCSPAVKRAIGDVIS--RHRPSAQYAA 142 (312)
T ss_dssp HGGGCCTTCEEEECCCCCHHHHHHHHHHHH--HHCTTCEEEE
T ss_pred hHhhcCCCCEEEEcCCCCHHHHHHHHHHHH--hhcCCCeEEe
Confidence 7653 2334455455555444555556565 44 666553
No 175
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=87.20 E-value=0.86 Score=51.45 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=52.0
Q ss_pred ccccchhhhccc-----CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE
Q psy3769 365 PIFDTVKNAKNE-----TGATVSVIYVPAIFATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 365 ~~y~sl~dip~~-----~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
++|.|++++.+. ..+|+++|++|...-.+.+.+|+++|. ++++ -- ....++.++|.+.|+ ++|+.+
T Consensus 67 ~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~-EKPla~~~~ea~~l~~~a~--~~g~~~ 139 (398)
T 3dty_A 67 RCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGL-HVVC-EKPLCFTVEQAENLRELSH--KHNRIV 139 (398)
T ss_dssp GBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEE-CSCSCSCHHHHHHHHHHHH--HTTCCE
T ss_pred eeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEE-eCCCcCCHHHHHHHHHHHH--HcCCeE
Confidence 699999998653 259999999999999999999999994 5444 22 334556788999999 888765
No 176
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.05 E-value=0.65 Score=53.92 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=67.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---c------cccccccchhhhccc-CCCcEEEEEecc-hhH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---F------EEIPIFDTVKNAKNE-TGATVSVIYVPA-IFA 391 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i------~G~~~y~sl~dip~~-~~vDlavi~vp~-~~v 391 (974)
++| .+.+|..+..++.+.|++ |..+|+.. +. + .|+..+.|++++.+. .++|++++++|+ ..+
T Consensus 10 vIG-~G~mG~~lA~~L~~~G~~----V~v~dr~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v 82 (474)
T 2iz1_A 10 VVG-MAVMGKNLALNVESRGYT----VAIYNRTT--SKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAAT 82 (474)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSSH--HHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHH
T ss_pred EEe-eHHHHHHHHHHHHhCCCE----EEEEcCCH--HHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHH
Confidence 356 467888888899988987 66677653 21 1 167788899887641 138999999999 478
Q ss_pred HHHHHHHHHc-CCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 392 TSAIWEAIES-ELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 392 ~~~v~e~~~~-gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
.+++++.... .-+.+++ .+.+.+ .+..++.+.++ +.|+++++
T Consensus 83 ~~vl~~l~~~l~~g~iiId~s~~~~-~~~~~l~~~l~--~~g~~~v~ 126 (474)
T 2iz1_A 83 DATIKSLLPLLDIGDILIDGGNTHF-PDTMRRNAELA--DSGINFIG 126 (474)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHTT--TSSCEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCCH-HHHHHHHHHHH--HCCCeEEC
Confidence 8888766542 2223333 334443 33445566676 67888764
No 177
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.95 E-value=0.47 Score=51.71 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=69.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecch-hHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI- 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v- 395 (974)
|+| .+..|..+.++|.+.|++ |+.+|+.. +.. .|.....|++++.+ ..|++++++|.. .+.+++
T Consensus 26 iIG-~G~mG~~~A~~l~~~G~~----V~~~dr~~--~~~~~l~~~g~~~~~~~~~~~~--~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 26 FLG-LGIMGKAMSMNLLKNGFK----VTVWNRTL--SKCDELVEHGASVCESPAEVIK--KCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSSG--GGGHHHHHTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEC-ccHHHHHHHHHHHHCCCe----EEEEeCCH--HHHHHHHHCCCeEcCCHHHHHH--hCCEEEEEcCCHHHHHHHHh
Confidence 356 467888888999998986 66677764 322 37788899999876 789999999864 566666
Q ss_pred --HHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 --WEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 --~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++..+. .-..+++-.+.......+++.+.++ +.|++++.
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~--~~g~~~v~ 138 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKINEAIT--GKGGRFVE 138 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHHHHHH--HcCCEEEe
Confidence 443332 2234455555555555566777777 67777664
No 178
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=86.53 E-value=0.52 Score=51.93 Aligned_cols=78 Identities=9% Similarity=0.098 Sum_probs=56.6
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC--CCChHHHHHHHHHHhcCCCCceE-EccCCc
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE--GIPVRDMLILKNKMKKNNSKTLL-LGPNCP 440 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~--G~~e~~~~~l~~~a~~~~~gi~v-iGPnc~ 440 (974)
.++|.|++++.+..++|+++|++|...-.+.+.+|+++|. ++ ++-- ....++.++|.+.|+ ++|..+ +..+..
T Consensus 53 ~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hV-l~EKPla~~~~ea~~l~~~a~--~~g~~~~~~v~~~ 128 (337)
T 3ip3_A 53 PKKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKI-HA-FVEKPIATTFEDLEKIRSVYQ--KVRNEVFFTAMFG 128 (337)
T ss_dssp CEECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EE-EECSSSCSSHHHHHHHHHHHH--HHTTTCCEEECCG
T ss_pred CcccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cE-EEeCCCCCCHHHHHHHHHHHH--HhCCceEEEeccc
Confidence 4789999999764579999999999999999999999994 43 3332 233456778999999 888652 333343
Q ss_pred ccccc
Q psy3769 441 GLIVP 445 (974)
Q Consensus 441 G~~~~ 445 (974)
--++|
T Consensus 129 ~R~~p 133 (337)
T 3ip3_A 129 IRYRP 133 (337)
T ss_dssp GGGSH
T ss_pred ccCCH
Confidence 33333
No 179
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=86.35 E-value=0.73 Score=50.13 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=66.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEec-chhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVP-AIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp-~~~v~~~v~ 396 (974)
|+| .|..|..+.+.+.+.|++ |+.++++. +.. .|...+.+..++.+ ..|++++++| +..+.+++.
T Consensus 35 iIG-~G~mG~~~a~~l~~~g~~----V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~--~~DvVi~av~~~~~~~~v~~ 105 (316)
T 2uyy_A 35 FLG-LGLMGSGIVSNLLKMGHT----VTVWNRTA--EKCDLFIQEGARLGRTPAEVVS--TCDITFACVSDPKAAKDLVL 105 (316)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSSG--GGGHHHHHTTCEECSCHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEc-ccHHHHHHHHHHHhCCCE----EEEEeCCH--HHHHHHHHcCCEEcCCHHHHHh--cCCEEEEeCCCHHHHHHHHc
Confidence 356 467888888888888886 56666653 222 36777888888765 6899999999 777777776
Q ss_pred HHH---H-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 EAI---E-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 e~~---~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+.. + ..-+.+++-.+.......+++.+.+. +.+.++++
T Consensus 106 ~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~--~~~~~~v~ 147 (316)
T 2uyy_A 106 GPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIV--SRGGRFLE 147 (316)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEE
T ss_pred CchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHH--HcCCEEEE
Confidence 531 1 22233444334444333455666665 55777764
No 180
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.30 E-value=1.7 Score=46.30 Aligned_cols=101 Identities=11% Similarity=-0.094 Sum_probs=63.9
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchh-HHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~ 396 (974)
|+| .+..|..+.+.+.+ |++ |+.++++. +.. .|...+. ++++.+ ..|++++++|... +.++++
T Consensus 6 iiG-~G~~G~~~a~~l~~-g~~----V~~~~~~~--~~~~~~~~~g~~~~~-~~~~~~--~~D~vi~~v~~~~~~~~v~~ 74 (289)
T 2cvz_A 6 FIG-LGAMGYPMAGHLAR-RFP----TLVWNRTF--EKALRHQEEFGSEAV-PLERVA--EARVIFTCLPTTREVYEVAE 74 (289)
T ss_dssp EEC-CSTTHHHHHHHHHT-TSC----EEEECSST--HHHHHHHHHHCCEEC-CGGGGG--GCSEEEECCSSHHHHHHHHH
T ss_pred EEc-ccHHHHHHHHHHhC-CCe----EEEEeCCH--HHHHHHHHCCCcccC-HHHHHh--CCCEEEEeCCChHHHHHHHH
Confidence 356 46788888888888 876 56666653 221 2555555 666654 7899999999775 777776
Q ss_pred HHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 EAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+..+. .-+..++..+.......+++.+.++ +.|+++++
T Consensus 75 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~--~~g~~~~~ 113 (289)
T 2cvz_A 75 ALYPYLREGTYWVDATSGEPEASRRLAERLR--EKGVTYLD 113 (289)
T ss_dssp HHTTTCCTTEEEEECSCCCHHHHHHHHHHHH--TTTEEEEE
T ss_pred HHHhhCCCCCEEEECCCCCHHHHHHHHHHHH--HcCCEEEE
Confidence 65442 2334444334444344456777777 66777664
No 181
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=85.69 E-value=1.5 Score=48.70 Aligned_cols=67 Identities=10% Similarity=0.069 Sum_probs=49.3
Q ss_pred ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC-CCChHHHHHH---HHHHhcCCCCceE
Q psy3769 365 PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITE-GIPVRDMLIL---KNKMKKNNSKTLL 434 (974)
Q Consensus 365 ~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~-G~~e~~~~~l---~~~a~~~~~gi~v 434 (974)
++|.|.+++-+...+|+++|++|...-.+.+.+|+++| |++++==. +...++.++| .++++ ++|+.+
T Consensus 62 ~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPla~t~~ea~~l~~~~~~~~--~~g~~~ 132 (390)
T 4h3v_A 62 TTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPLANTVAEAEAMAAAAAKAA--AGGIRS 132 (390)
T ss_dssp EEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHHH--HTTCCE
T ss_pred cccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCcccchhHHHHHHHHHHHHH--hcCCce
Confidence 58999999986668999999999999999999999999 55443211 2334455666 44466 677654
No 182
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=85.65 E-value=0.94 Score=49.30 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=68.0
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchhHH-HHHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIFAT-SAIWE 397 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~v~-~~v~e 397 (974)
+| .+..|.-+.+||++.||+ |+..|... +.. .|.....|++|+.+ ..|++++++|..... +++..
T Consensus 9 IG-lG~MG~~mA~~L~~~G~~----v~v~dr~~--~~~~~l~~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~v~~V~~~ 79 (300)
T 3obb_A 9 IG-LGHMGAPMATNLLKAGYL----LNVFDLVQ--SAVDGLVAAGASAARSARDAVQ--GADVVISMLPASQHVEGLYLD 79 (300)
T ss_dssp EC-CSTTHHHHHHHHHHTTCE----EEEECSSH--HHHHHHHHTTCEECSSHHHHHT--TCSEEEECCSCHHHHHHHHHS
T ss_pred ee-ehHHHHHHHHHHHhCCCe----EEEEcCCH--HHHHHHHHcCCEEcCCHHHHHh--cCCceeecCCchHHHHHHHhc
Confidence 44 357888899999999997 55556553 222 37888899999976 899999999976433 33322
Q ss_pred H---HHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 398 A---IES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 398 ~---~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
. .+. .-..++|-.+-...+..+++.+.++ ++|++++
T Consensus 80 ~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~--~~G~~~l 119 (300)
T 3obb_A 80 DDGLLAHIAPGTLVLECSTIAPTSARKIHAAAR--ERGLAML 119 (300)
T ss_dssp SSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHH--TTTCEEE
T ss_pred hhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHH--HcCCEEE
Confidence 1 111 1123444444455556677888898 9999887
No 183
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.61 E-value=0.71 Score=48.58 Aligned_cols=88 Identities=18% Similarity=0.183 Sum_probs=62.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES- 401 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~- 401 (974)
|+|. +..|..+.+.+.+.|+..+..|+.++++. +. .|+..+.+.+++.+ ..|++++++|+..+.+++++....
T Consensus 9 iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~--~~-~g~~~~~~~~~~~~--~~D~vi~~v~~~~~~~v~~~l~~~l 82 (262)
T 2rcy_A 9 FMGL-GQMGSALAHGIANANIIKKENLFYYGPSK--KN-TTLNYMSSNEELAR--HCDIIVCAVKPDIAGSVLNNIKPYL 82 (262)
T ss_dssp EECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSC--CS-SSSEECSCHHHHHH--HCSEEEECSCTTTHHHHHHHSGGGC
T ss_pred EECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCc--cc-CceEEeCCHHHHHh--cCCEEEEEeCHHHHHHHHHHHHHhc
Confidence 3563 67888888888888831000367777765 33 68888888888765 789999999999999999876542
Q ss_pred CCcEEEEEcCCCChH
Q psy3769 402 ELELVICITEGIPVR 416 (974)
Q Consensus 402 gv~~~vi~s~G~~e~ 416 (974)
.-+.++..++|+..+
T Consensus 83 ~~~~vv~~~~gi~~~ 97 (262)
T 2rcy_A 83 SSKLLISICGGLNIG 97 (262)
T ss_dssp TTCEEEECCSSCCHH
T ss_pred CCCEEEEECCCCCHH
Confidence 223456667888764
No 184
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.02 E-value=1.3 Score=51.52 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=67.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc----------cccccccchhhhccc-CCCcEEEEEecch-h
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF----------EEIPIFDTVKNAKNE-TGATVSVIYVPAI-F 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i----------~G~~~y~sl~dip~~-~~vDlavi~vp~~-~ 390 (974)
|+| .+.+|..+..+|.+.|++ |..+|+.. +.. .|+..+.|++++.+. ..+|+++++||+. .
T Consensus 7 vIG-~G~mG~~lA~~La~~G~~----V~v~dr~~--~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~ 79 (482)
T 2pgd_A 7 LIG-LAVMGQNLILNMNDHGFV----VCAFNRTV--SKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQA 79 (482)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHH
T ss_pred EEC-hHHHHHHHHHHHHHCCCe----EEEEeCCH--HHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHH
Confidence 356 467888888899988987 66666653 211 457778888887521 1689999999995 7
Q ss_pred HHHHHHHHHHc-CCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 391 ATSAIWEAIES-ELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 391 v~~~v~e~~~~-gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+.+++++.... .-..+|+ .+.|.+. +..++.+.++ +.|+++++
T Consensus 80 v~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l~--~~g~~~v~ 124 (482)
T 2pgd_A 80 VDNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDLK--DKGILFVG 124 (482)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHHH--HTTCEEEE
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHH--HcCCeEeC
Confidence 88888776542 2223333 3445543 3344556666 56777663
No 185
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=84.17 E-value=0.84 Score=43.19 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=50.4
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEecCC--CCCccccccccccchhhhc---ccCCCcEEEEEecch---hHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGVNPK--KNGQKFEEIPIFDTVKNAK---NETGATVSVIYVPAI---FATS 393 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pVnP~--~~g~~i~G~~~y~sl~dip---~~~~vDlavi~vp~~---~v~~ 393 (974)
|+|. +..|..+.+.+.+. ||+ .+..+.+. ..+..+.|+|+|. .++++ ++..+|.+++++|.. ...+
T Consensus 9 IiGa-G~~g~~l~~~l~~~~g~~---vvg~~d~~~~~~g~~i~g~pV~g-~~~l~~~~~~~~id~viia~~~~~~~~~~~ 83 (141)
T 3nkl_A 9 IYGA-GSAGLQLANMLRQGKEFH---PIAFIDDDRKKHKTTMQGITIYR-PKYLERLIKKHCISTVLLAVPSASQVQKKV 83 (141)
T ss_dssp EECC-SHHHHHHHHHHHHSSSEE---EEEEECSCGGGTTCEETTEEEEC-GGGHHHHHHHHTCCEEEECCTTSCHHHHHH
T ss_pred EECC-CHHHHHHHHHHHhCCCcE---EEEEEECCcccCCCEecCeEEEC-HHHHHHHHHHCCCCEEEEeCCCCCHHHHHH
Confidence 3562 34555566666543 565 45444332 2245678999987 66664 234789999999853 3477
Q ss_pred HHHHHHHcCCcE
Q psy3769 394 AIWEAIESELEL 405 (974)
Q Consensus 394 ~v~e~~~~gv~~ 405 (974)
+++.|.+.|++.
T Consensus 84 i~~~l~~~gv~v 95 (141)
T 3nkl_A 84 IIESLAKLHVEV 95 (141)
T ss_dssp HHHHHHTTTCEE
T ss_pred HHHHHHHcCCeE
Confidence 888999999984
No 186
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.99 E-value=1 Score=48.25 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=66.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecc-hhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~ 396 (974)
|+| .+..|..+.+.+.+.|++ |+.++++. +.. .|+..+.+.+++.+ ..|++++++|. ..+.+++.
T Consensus 5 iiG-~G~mG~~~a~~l~~~g~~----V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~~vp~~~~~~~v~~ 75 (296)
T 2gf2_A 5 FIG-LGNMGNPMAKNLMKHGYP----LIIYDVFP--DACKEFQDAGEQVVSSPADVAE--KADRIITMLPTSINAIEAYS 75 (296)
T ss_dssp EEC-CSTTHHHHHHHHHHTTCC----EEEECSST--HHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEe-ccHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHcCCeecCCHHHHHh--cCCEEEEeCCCHHHHHHHHh
Confidence 456 467888888899888876 66676654 221 37778889888765 68999999964 56677776
Q ss_pred HH---HH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceE
Q psy3769 397 EA---IE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 397 e~---~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
+. .+ ..-+.+++-++|......+++.+.+. +.+..+
T Consensus 76 ~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~--~~g~~~ 115 (296)
T 2gf2_A 76 GANGILKKVKKGSLLIDSSTIDPAVSKELAKEVE--KMGAVF 115 (296)
T ss_dssp STTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEE
T ss_pred CchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHH--HcCCEE
Confidence 52 11 12234555577877666566666665 445444
No 187
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=83.84 E-value=0.52 Score=54.48 Aligned_cols=113 Identities=8% Similarity=0.109 Sum_probs=71.7
Q ss_pred ccccCcccccchhhhhcc------CCCCceEEEEecCCCCCc---ccccccc----ccchhhhcccCCCcEEEEEecchh
Q psy3769 324 FGITGKTGRFHTNLCLNY------GNGKKAFVAGVNPKKNGQ---KFEEIPI----FDTVKNAKNETGATVSVIYVPAIF 390 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~------g~~g~~~V~pVnP~~~g~---~i~G~~~----y~sl~dip~~~~vDlavi~vp~~~ 390 (974)
+| .|..|..+.++|++. |++ ++....+..... +-.|+.. ..+++|+.. ..|++++++|+..
T Consensus 60 IG-lGsMG~AmA~nLr~s~~~~g~G~~---ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~--~ADVVILaVP~~~ 133 (525)
T 3fr7_A 60 IG-WGSQGPAQAQNLRDSLAEAKSDIV---VKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVS--GSDLVLLLISDAA 133 (525)
T ss_dssp EC-CTTHHHHHHHHHHHHHHHTTCCCE---EEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHH--HCSEEEECSCHHH
T ss_pred Ee-EhHHHHHHHHHHHhcccccCCCCE---EEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHh--cCCEEEECCChHH
Confidence 46 457888899999988 876 555655432001 2357765 367888866 7899999999998
Q ss_pred HHHHHHHHHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCcccc
Q psy3769 391 ATSAIWEAIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLI 443 (974)
Q Consensus 391 v~~~v~e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~ 443 (974)
..+++++... ..-..++.++.||.....++-..... ....+-.+.||++|-.
T Consensus 134 ~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p-~dv~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 134 QADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP-KNISVIAVCPKGMGPS 186 (525)
T ss_dssp HHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC-TTSEEEEEEESSCHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC-CCCcEEEEecCCCchh
Confidence 8888887654 23456789999987433221000111 0223445579988754
No 188
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.77 E-value=1.3 Score=48.38 Aligned_cols=102 Identities=11% Similarity=0.000 Sum_probs=68.9
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCC----Cccc------ccccccc-chhhhcccCCCcEEEEEecchh
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKN----GQKF------EEIPIFD-TVKNAKNETGATVSVIYVPAIF 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~----g~~i------~G~~~y~-sl~dip~~~~vDlavi~vp~~~ 390 (974)
++| .+.+|..+.+++.+.| ++ |+.++++.. .++. .|. .. |++++.+ ..|++++++|+..
T Consensus 29 vIG-~G~mG~~lA~~L~~~G~~~----V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~--~aDvVi~avp~~~ 99 (317)
T 4ezb_A 29 FIG-FGEAAQSIAGGLGGRNAAR----LAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIA--CADVVLSLVVGAA 99 (317)
T ss_dssp EEC-CSHHHHHHHHHHHTTTCSE----EEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGG--GCSEEEECCCGGG
T ss_pred EEC-ccHHHHHHHHHHHHcCCCe----EEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHh--cCCEEEEecCCHH
Confidence 356 4678888888999888 75 666666520 0011 255 56 7888766 7899999999999
Q ss_pred HHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 391 ATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 391 v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
..+.+++..+. .-..+++-.++......+++.+..+ +.|++++
T Consensus 100 ~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~--~~g~~~~ 143 (317)
T 4ezb_A 100 TKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIA--TGKGSFV 143 (317)
T ss_dssp HHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHH--TSSCEEE
T ss_pred HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHH--HcCCeEE
Confidence 88888776653 2334555555665555566777777 7777655
No 189
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.06 E-value=0.83 Score=50.51 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=62.5
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHHH-H
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEAI-E 400 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~~-~ 400 (974)
+| .|..|..+.+.+...|++ |+..++.. +...|...+.+++++.. ..|++++++|.. .+...+ ++.. .
T Consensus 170 IG-~G~iG~~vA~~l~~~G~~----V~~~dr~~--~~~~g~~~~~~l~ell~--~aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 170 IG-LGRIGLAVAERAEAFDCP----ISYFSRSK--KPNTNYTYYGSVVELAS--NSDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp EC-CSHHHHHHHHHHHTTTCC----EEEECSSC--CTTCCSEEESCHHHHHH--TCSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred EC-CCHHHHHHHHHHHHCCCE----EEEECCCc--hhccCceecCCHHHHHh--cCCEEEEecCCChHHHHHhhHHHHhc
Confidence 45 357888888999888887 67777775 44457777889999866 799999999974 343333 1111 2
Q ss_pred cCCcEEEEE-cCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 401 SELELVICI-TEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 401 ~gv~~~vi~-s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
..-..+++- +.|. ..++++|.+..+ +.+++-.|
T Consensus 241 mk~gailIn~srG~-~vd~~aL~~aL~--~g~i~ga~ 274 (333)
T 3ba1_A 241 LGPKGVLINIGRGP-HVDEPELVSALV--EGRLGGAG 274 (333)
T ss_dssp HCTTCEEEECSCGG-GBCHHHHHHHHH--HTSSCEEE
T ss_pred CCCCCEEEECCCCc-hhCHHHHHHHHH--cCCCeEEE
Confidence 222333333 3343 233455666666 55555444
No 190
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=82.82 E-value=1.4 Score=51.21 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=67.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc--------cc--cccccchhhhccc-CCCcEEEEEecch-h
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF--------EE--IPIFDTVKNAKNE-TGATVSVIYVPAI-F 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i--------~G--~~~y~sl~dip~~-~~vDlavi~vp~~-~ 390 (974)
++| .+.+|..+..+|.+.||+ |...|+.. +.+ .| +..+.|++|+.+. ..+|++++++|+. .
T Consensus 9 iIG-lG~MG~~lA~~L~~~G~~----V~v~dr~~--~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 9 LIG-LAVMGQNLILNMNDHGFV----VCAFNRTV--SKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA 81 (484)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH
T ss_pred EEC-hhHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH
Confidence 356 467888889999999987 66666664 221 12 2346788887641 1489999999995 7
Q ss_pred HHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEcc
Q psy3769 391 ATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGP 437 (974)
Q Consensus 391 v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGP 437 (974)
+.+++++.... .-..+++-.+.....+..++.+.++ +.|++.++.
T Consensus 82 v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~--~~Gi~fvd~ 127 (484)
T 4gwg_A 82 VDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLK--AKGILFVGS 127 (484)
T ss_dssp HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHH--HTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHH--hhccccccC
Confidence 77888777653 2233333333333334445556666 678887763
No 191
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.79 E-value=1.2 Score=47.04 Aligned_cols=86 Identities=13% Similarity=0.137 Sum_probs=60.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------cccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+|. |..|..+.+.+.+.|++ .|+.++++. +.. .|+..+.+++++.+ ..|++++++|+..+.++++
T Consensus 15 iiG~-G~mG~~~a~~l~~~g~~---~v~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~--~~Dvvi~av~~~~~~~v~~ 86 (266)
T 3d1l_A 15 LIGA-GNLATNLAKALYRKGFR---IVQVYSRTE--ESARELAQKVEAEYTTDLAEVNP--YAKLYIVSLKDSAFAELLQ 86 (266)
T ss_dssp EECC-SHHHHHHHHHHHHHTCC---EEEEECSSH--HHHHHHHHHTTCEEESCGGGSCS--CCSEEEECCCHHHHHHHHH
T ss_pred EEcC-CHHHHHHHHHHHHCCCe---EEEEEeCCH--HHHHHHHHHcCCceeCCHHHHhc--CCCEEEEecCHHHHHHHHH
Confidence 4573 67888888888888887 567776653 221 27778888888765 7999999999999888888
Q ss_pred HHHHc-CCc-EEEEEcCCCChH
Q psy3769 397 EAIES-ELE-LVICITEGIPVR 416 (974)
Q Consensus 397 e~~~~-gv~-~~vi~s~G~~e~ 416 (974)
++.+. .-. .++-.++|.+.+
T Consensus 87 ~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HHHTTCCTTCEEEECCTTSCGG
T ss_pred HHHhhcCCCcEEEECCCCCchH
Confidence 77652 122 334455677643
No 192
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=82.72 E-value=0.85 Score=52.32 Aligned_cols=70 Identities=11% Similarity=0.003 Sum_probs=50.6
Q ss_pred ccccccchhhhcccCCCcEEEEEecc-hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.++|.+.+++-+...+|++++++|. +.-.+.+.+|+++| |++++.......++..+|.+.|+ ++|+.+.
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AG-KHVv~~nk~l~~~eg~eL~~~A~--e~Gvvl~ 162 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNG-KHLVMMNVEADVTIGPYLKAQAD--KQGVIYS 162 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTT-CEEEECCHHHHHHHHHHHHHHHH--HHTCCEE
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcC-CcEEecCcccCHHHHHHHHHHHH--HhCCeee
Confidence 35689999998765579999999975 45688999999999 55555443221223467888888 7776654
No 193
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=82.53 E-value=1.7 Score=48.21 Aligned_cols=85 Identities=15% Similarity=0.115 Sum_probs=55.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCC-CCcccc-------c--cccccchhhhcccCCCcEEEEEecchhHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKK-NGQKFE-------E--IPIFDTVKNAKNETGATVSVIYVPAIFAT 392 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~-~g~~i~-------G--~~~y~sl~dip~~~~vDlavi~vp~~~v~ 392 (974)
|.|.+|..|..+++.|.+++.- .+..++... .|..+. | -..+.+++++ . .+|+++.++|.....
T Consensus 9 IiGAtG~iG~~llr~L~~~p~~---elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~--~vDvV~~a~g~~~s~ 82 (345)
T 2ozp_A 9 IVGASGYAGGEFLRLALSHPYL---EVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEKL-E--PADILVLALPHGVFA 82 (345)
T ss_dssp EETTTSHHHHHHHHHHHTCTTE---EEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGGC-C--CCSEEEECCCTTHHH
T ss_pred EECCCCHHHHHHHHHHHcCCCc---EEEEEECchhhCchhHHhCchhcCcccccccchhHh-c--CCCEEEEcCCcHHHH
Confidence 4677788888888888765432 355555432 122221 1 0112233333 2 799999999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCC
Q psy3769 393 SAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 393 ~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
+.+..+.++|++ +|.+|+-|.
T Consensus 83 ~~a~~~~~aG~~-VId~Sa~~r 103 (345)
T 2ozp_A 83 REFDRYSALAPV-LVDLSADFR 103 (345)
T ss_dssp HTHHHHHTTCSE-EEECSSTTS
T ss_pred HHHHHHHHCCCE-EEEcCcccc
Confidence 999999999988 677777564
No 194
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.05 E-value=0.99 Score=48.90 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=67.4
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----ccccc-ccchhhhcccCCCcEEEEEecch-hHHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPI-FDTVKNAKNETGATVSVIYVPAI-FATSAI- 395 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~-y~sl~dip~~~~vDlavi~vp~~-~v~~~v- 395 (974)
+| .+..|..+.+++.+.|++ |..++++. +.. .|... ..|++|+.+ ..|++++++|.. .+..++
T Consensus 13 IG-~G~mG~~~a~~l~~~G~~----V~~~dr~~--~~~~~~~~~g~~~~~~~~~e~~~--~aDvvi~~vp~~~~~~~v~~ 83 (303)
T 3g0o_A 13 VG-LGSMGMGAARSCLRAGLS----TWGADLNP--QACANLLAEGACGAAASAREFAG--VVDALVILVVNAAQVRQVLF 83 (303)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHHTTCSEEESSSTTTTT--TCSEEEECCSSHHHHHHHHC
T ss_pred EC-CCHHHHHHHHHHHHCCCe----EEEEECCH--HHHHHHHHcCCccccCCHHHHHh--cCCEEEEECCCHHHHHHHHh
Confidence 56 467888888899988886 66677664 221 26665 788888865 789999999985 455555
Q ss_pred --HHHHHc-CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 396 --WEAIES-ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 396 --~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++..+. .-..+++-.+.......+++.+.++ +.|+.++.
T Consensus 84 ~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~--~~g~~~~~ 125 (303)
T 3g0o_A 84 GEDGVAHLMKPGSAVMVSSTISSADAQEIAAALT--ALNLNMLD 125 (303)
T ss_dssp --CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHH--TTTCEEEE
T ss_pred ChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHH--HcCCeEEe
Confidence 333321 2234555555555555566777777 77877664
No 195
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=82.01 E-value=0.93 Score=50.29 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=59.9
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhccc--CCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNE--TGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~--~~vDlavi~vp~~~v~~~v 395 (974)
|+| .|.+|..+.+.+.+.|++ |+..+++. +.. .|..++.+++++... ...|++++++|+..+.+++
T Consensus 13 IIG-~G~mG~slA~~L~~~G~~----V~~~dr~~--~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl 85 (341)
T 3ktd_A 13 ILG-LGLIGGSLLRDLHAANHS----VFGYNRSR--SGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLL 85 (341)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSCH--HHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred EEe-ecHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHH
Confidence 356 467888888999988876 77787764 222 366667787776431 1479999999999999999
Q ss_pred HHHHHcCCcEEEEEcCCCCh
Q psy3769 396 WEAIESELELVICITEGIPV 415 (974)
Q Consensus 396 ~e~~~~gv~~~vi~s~G~~e 415 (974)
++.....-..+++-.++...
T Consensus 86 ~~l~~~~~~~iv~Dv~Svk~ 105 (341)
T 3ktd_A 86 DAVHTHAPNNGFTDVVSVKT 105 (341)
T ss_dssp HHHHHHCTTCCEEECCSCSH
T ss_pred HHHHccCCCCEEEEcCCCCh
Confidence 88776544444444455553
No 196
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.53 E-value=1.6 Score=50.67 Aligned_cols=104 Identities=18% Similarity=0.126 Sum_probs=66.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------cc-------cccccchhhhccc-CCCcEEEEEecc
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------EE-------IPIFDTVKNAKNE-TGATVSVIYVPA 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------~G-------~~~y~sl~dip~~-~~vDlavi~vp~ 388 (974)
|+| .+.+|..+..+|.+.|++ |..+|+.. +.. .| +..+.|++++.+. .++|++++++|+
T Consensus 6 VIG-~G~mG~~lA~~La~~G~~----V~v~dr~~--~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 6 VVG-LGVMGANLALNIAEKGFK----VAVFNRTY--SKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEECSSH--HHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCC
T ss_pred EEC-hHHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCC
Confidence 356 467888888888888887 66666653 211 14 6677888887541 148999999999
Q ss_pred h-hHHHHHHHHHHc-CCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 389 I-FATSAIWEAIES-ELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 389 ~-~v~~~v~e~~~~-gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
. .+.+++++.... .-..+|+ .+.|.+ .+..++.+.++ +.|++.++
T Consensus 79 ~~~v~~vl~~l~~~l~~g~iIId~sng~~-~~~~~l~~~l~--~~g~~~v~ 126 (478)
T 1pgj_A 79 GAATDSTIEQLKKVFEKGDILVDTGNAHF-KDQGRRAQQLE--AAGLRFLG 126 (478)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEECCCCCH-HHHHHHHHHHH--TTTCEEEE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECCCCCh-HHHHHHHHHHH--HCCCeEEE
Confidence 5 788888776542 2223333 344543 33345566677 67777664
No 197
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.37 E-value=1.5 Score=47.07 Aligned_cols=101 Identities=9% Similarity=0.127 Sum_probs=64.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecc-hhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~ 396 (974)
|+| .+..|..+.+.+.+.|++ |+.++++. +.. .|+..+.+.+++.+ ..|++++++|. ..+.+++.
T Consensus 9 iiG-~G~~G~~~a~~l~~~g~~----V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~--~~D~vi~~vp~~~~~~~v~~ 79 (301)
T 3cky_A 9 FIG-LGAMGKPMAINLLKEGVT----VYAFDLME--ANVAAVVAQGAQACENNQKVAA--ASDIIFTSLPNAGIVETVMN 79 (301)
T ss_dssp EEC-CCTTHHHHHHHHHHTTCE----EEEECSSH--HHHHHHHTTTCEECSSHHHHHH--HCSEEEECCSSHHHHHHHHH
T ss_pred EEC-ccHHHHHHHHHHHHCCCe----EEEEeCCH--HHHHHHHHCCCeecCCHHHHHh--CCCEEEEECCCHHHHHHHHc
Confidence 456 467888888888888875 66666653 211 27778888888765 68999999975 44666664
Q ss_pred ---HHHH-cCC-cEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 397 ---EAIE-SEL-ELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 397 ---e~~~-~gv-~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+..+ ..- +.++-++.|.++ ..+++.+.++ +.|++++
T Consensus 80 ~~~~l~~~l~~~~~vv~~~~~~~~-~~~~l~~~~~--~~g~~~~ 120 (301)
T 3cky_A 80 GPGGVLSACKAGTVIVDMSSVSPS-STLKMAKVAA--EKGIDYV 120 (301)
T ss_dssp STTCHHHHSCTTCEEEECCCCCHH-HHHHHHHHHH--HTTCEEE
T ss_pred CcchHhhcCCCCCEEEECCCCCHH-HHHHHHHHHH--HcCCeEE
Confidence 3322 222 233444556543 3345666666 5677776
No 198
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=81.04 E-value=1.8 Score=48.51 Aligned_cols=112 Identities=7% Similarity=0.016 Sum_probs=68.2
Q ss_pred ccccccCcccccchh-hhhccCCCCceEEEEecCCCCCcccc---cc-ccccch---hhhcccCCCcEEEEEecchhHHH
Q psy3769 322 NIFGITGKTGRFHTN-LCLNYGNGKKAFVAGVNPKKNGQKFE---EI-PIFDTV---KNAKNETGATVSVIYVPAIFATS 393 (974)
Q Consensus 322 ni~G~~~k~G~~v~~-~l~~~g~~g~~~V~pVnP~~~g~~i~---G~-~~y~sl---~dip~~~~vDlavi~vp~~~v~~ 393 (974)
.|+|.||-.|..+++ -|.++.|..- .+..+..+..|+.+. |. ..+... +++ + .+|+++.++|.....+
T Consensus 4 aIvGATG~vG~ellr~lL~~hp~~~~-~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~~-~--~~Dvvf~a~~~~~s~~ 79 (370)
T 3pzr_A 4 GLVGWRGMVGSVLMQRMVEERDFDLI-EPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESL-K--QLDAVITCQGGSYTEK 79 (370)
T ss_dssp EEESCSSHHHHHHHHHHHHTTGGGGS-EEEEEESSSTTSBCCCSSSCCCBCEETTCHHHH-T--TCSEEEECSCHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhcCCCCce-EEEEEeccccCcCHHHhCCCceEEEecCChhHh-c--cCCEEEECCChHHHHH
Confidence 457989888999888 6667776311 455554443454432 21 112222 222 2 7999999999999999
Q ss_pred HHHHHHHcCCcEEE-EEcCCCChH----------HHHHHHHHHhcCCCCc-eEEccCCc
Q psy3769 394 AIWEAIESELELVI-CITEGIPVR----------DMLILKNKMKKNNSKT-LLLGPNCP 440 (974)
Q Consensus 394 ~v~e~~~~gv~~~v-i~s~G~~e~----------~~~~l~~~a~~~~~gi-~viGPnc~ 440 (974)
.+..+.++|+|.+| =.++.|.-+ -.++ .+.++ ++++ .|..|||.
T Consensus 80 ~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~-i~~~~--~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 80 VYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQ-ILHGI--HHGTKTFVGGNCT 135 (370)
T ss_dssp HHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHH-HHHHH--HTTCCEEEECCHH
T ss_pred HHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHH-Hhhhh--hcCCcEEEcCChH
Confidence 99999999996433 333433211 1222 23343 3566 47799996
No 199
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=80.77 E-value=1.2 Score=40.14 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=57.6
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCCCccc-----ccccc-------ccchhhhcccCCCcEEEEEecch
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKNGQKF-----EEIPI-------FDTVKNAKNETGATVSVIYVPAI 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~g~~i-----~G~~~-------y~sl~dip~~~~vDlavi~vp~~ 389 (974)
|+|. +..|..+.+.+.+.| ++ |+.+..+. +.. .|... ..++.++.+ .+|+++.++|..
T Consensus 10 I~G~-G~iG~~~~~~l~~~g~~~----v~~~~r~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 10 VVGA-GKIGQMIAALLKTSSNYS----VTVADHDL--AALAVLNRMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp EECC-SHHHHHHHHHHHHCSSEE----EEEEESCH--HHHHHHHTTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred EECC-CHHHHHHHHHHHhCCCce----EEEEeCCH--HHHHHHHhCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 3566 677777777777777 44 55554432 111 12211 134444544 799999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 390 FATSAIWEAIESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 390 ~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
....+++.|.+.|++. +.+++... ..+++.+.++
T Consensus 81 ~~~~~~~~~~~~g~~~-~~~~~~~~--~~~~~~~~~~ 114 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHY-FDLTEDVA--ATNAVRALVE 114 (118)
T ss_dssp GHHHHHHHHHHTTCEE-ECCCSCHH--HHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCE-EEecCcHH--HHHHHHHHHH
Confidence 9999999999999986 45554433 2334455554
No 200
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=79.98 E-value=1.7 Score=48.75 Aligned_cols=113 Identities=10% Similarity=0.084 Sum_probs=69.5
Q ss_pred ccccccCcccccchh-hhhccCCCCceEEEEecCCCCCcccc---ccc-cccch---hhhcccCCCcEEEEEecchhHHH
Q psy3769 322 NIFGITGKTGRFHTN-LCLNYGNGKKAFVAGVNPKKNGQKFE---EIP-IFDTV---KNAKNETGATVSVIYVPAIFATS 393 (974)
Q Consensus 322 ni~G~~~k~G~~v~~-~l~~~g~~g~~~V~pVnP~~~g~~i~---G~~-~y~sl---~dip~~~~vDlavi~vp~~~v~~ 393 (974)
.|+|.|+-.|..+++ -|.++.|..- .+..+..+..|+.+. |.. .+... +++ . .+|+++.++|.....+
T Consensus 8 aIvGATG~vG~ellr~lL~~hp~~~~-~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~-~--~vDvvf~a~~~~~s~~ 83 (377)
T 3uw3_A 8 GLVGWRGMVGSVLMQRMQEEGDFDLI-EPVFFSTSNAGGKAPSFAKNETTLKDATSIDDL-K--KCDVIITCQGGDYTND 83 (377)
T ss_dssp EEESTTSHHHHHHHHHHHHTTGGGGS-EEEEEESSCTTSBCCTTCCSCCBCEETTCHHHH-H--TCSEEEECSCHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhhCCCCce-EEEEEechhcCCCHHHcCCCceEEEeCCChhHh-c--CCCEEEECCChHHHHH
Confidence 457999989999998 6667776321 455555444454432 211 12222 222 2 7999999999999999
Q ss_pred HHHHHHHcCCcE-EEEEcCCCChH----------HHHHHHHHHhcCCCCc-eEEccCCcc
Q psy3769 394 AIWEAIESELEL-VICITEGIPVR----------DMLILKNKMKKNNSKT-LLLGPNCPG 441 (974)
Q Consensus 394 ~v~e~~~~gv~~-~vi~s~G~~e~----------~~~~l~~~a~~~~~gi-~viGPnc~G 441 (974)
.+.++.++|+|. +|=.++.|.-. -.+++ +.++ ++++ .|..|||.-
T Consensus 84 ~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~--~~~i~~Ianp~C~t 140 (377)
T 3uw3_A 84 VFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVI-KDAL--VNGTKNFIGGNCTV 140 (377)
T ss_dssp HHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHH-HHHH--HTTCCEEEECCHHH
T ss_pred HHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHH-hhhh--hcCCcEEEcCCHHH
Confidence 999999999963 33344434321 12223 3343 3566 477999963
No 201
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=79.97 E-value=3.3 Score=44.71 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=55.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES- 401 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~- 401 (974)
|+|-.|..|..+.+.+.+.|++ |+.++++. . .+..++.. ..|++++++|+..+.+++++....
T Consensus 26 iIGg~G~mG~~la~~l~~~G~~----V~~~~~~~--~--------~~~~~~~~--~aDvVilavp~~~~~~vl~~l~~~l 89 (298)
T 2pv7_A 26 IVGGYGKLGGLFARYLRASGYP----ISILDRED--W--------AVAESILA--NADVVIVSVPINLTLETIERLKPYL 89 (298)
T ss_dssp EETTTSHHHHHHHHHHHTTTCC----EEEECTTC--G--------GGHHHHHT--TCSEEEECSCGGGHHHHHHHHGGGC
T ss_pred EEcCCCHHHHHHHHHHHhCCCe----EEEEECCc--c--------cCHHHHhc--CCCEEEEeCCHHHHHHHHHHHHhhc
Confidence 3565567888888889888886 66777764 2 25556554 789999999999999999987542
Q ss_pred CCcEEEEEcCCCChH
Q psy3769 402 ELELVICITEGIPVR 416 (974)
Q Consensus 402 gv~~~vi~s~G~~e~ 416 (974)
.-..+|+..++....
T Consensus 90 ~~~~iv~~~~svk~~ 104 (298)
T 2pv7_A 90 TENMLLADLTSVKRE 104 (298)
T ss_dssp CTTSEEEECCSCCHH
T ss_pred CCCcEEEECCCCCcH
Confidence 333455555666543
No 202
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.93 E-value=0.89 Score=47.85 Aligned_cols=83 Identities=10% Similarity=0.101 Sum_probs=58.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc------ccccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK------FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~------i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+..|..+.+.+.+.|+. |..++++. +. -.|+..+.+.+++.+ ..|++++++|+..+.++++
T Consensus 8 iiG-~G~mG~~~a~~l~~~g~~----v~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~--~~D~Vi~~v~~~~~~~v~~ 78 (259)
T 2ahr_A 8 IIG-VGKMASAIIKGLKQTPHE----LIISGSSL--ERSKEIAEQLALPYAMSHQDLID--QVDLVILGIKPQLFETVLK 78 (259)
T ss_dssp EEC-CSHHHHHHHHHHTTSSCE----EEEECSSH--HHHHHHHHHHTCCBCSSHHHHHH--TCSEEEECSCGGGHHHHHT
T ss_pred EEC-CCHHHHHHHHHHHhCCCe----EEEECCCH--HHHHHHHHHcCCEeeCCHHHHHh--cCCEEEEEeCcHhHHHHHH
Confidence 456 567888888888887753 77777653 22 137888889988766 7999999999998888887
Q ss_pred HHHHcCCcEEEEEcCCCChH
Q psy3769 397 EAIESELELVICITEGIPVR 416 (974)
Q Consensus 397 e~~~~gv~~~vi~s~G~~e~ 416 (974)
++. .|. .++-.+.|.+.+
T Consensus 79 ~l~-~~~-~vv~~~~~~~~~ 96 (259)
T 2ahr_A 79 PLH-FKQ-PIISMAAGISLQ 96 (259)
T ss_dssp TSC-CCS-CEEECCTTCCHH
T ss_pred Hhc-cCC-EEEEeCCCCCHH
Confidence 653 342 223344677654
No 203
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=79.89 E-value=0.4 Score=52.83 Aligned_cols=49 Identities=12% Similarity=0.319 Sum_probs=34.8
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChH
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVR 416 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~ 416 (974)
+++..+.++ .+ ..|++++++|+..+.+++++....+ +.+|.++.|+...
T Consensus 69 ~~~~~~~~~-~~--~aDvVil~vk~~~~~~v~~~l~~~~-~~vv~~~nGi~~~ 117 (335)
T 1z82_A 69 VRATNDLEE-IK--KEDILVIAIPVQYIREHLLRLPVKP-SMVLNLSKGIEIK 117 (335)
T ss_dssp SEEESCGGG-CC--TTEEEEECSCGGGHHHHHTTCSSCC-SEEEECCCCCCTT
T ss_pred EEEeCCHHH-hc--CCCEEEEECCHHHHHHHHHHhCcCC-CEEEEEeCCCCCC
Confidence 566677777 44 7899999999999998887654322 3456666687643
No 204
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=79.46 E-value=1.9 Score=45.33 Aligned_cols=94 Identities=12% Similarity=0.070 Sum_probs=59.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+| .+.+|..+.++|.+.|++ |+..++....+.. .|.. .+.+++.+ ..|++++++|+....+.+++
T Consensus 5 iIG-~G~mG~~la~~l~~~g~~----V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~--~aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 5 FIG-FGEVAQTLASRLRSRGVE----VVTSLEGRSPSTIERARTVGVT--ETSEEDVY--SCPVVISAVTPGVALGAARR 75 (264)
T ss_dssp EES-CSHHHHHHHHHHHHTTCE----EEECCTTCCHHHHHHHHHHTCE--ECCHHHHH--TSSEEEECSCGGGHHHHHHH
T ss_pred EEe-chHHHHHHHHHHHHCCCe----EEEeCCccCHHHHHHHHHCCCc--CCHHHHHh--cCCEEEEECCCHHHHHHHHH
Confidence 456 467888888888888876 5556763100111 2554 67777655 78999999999877777776
Q ss_pred HHHcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 398 AIESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 398 ~~~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
..+. .+.+++-.++......+++.+.+.
T Consensus 76 ~~~~-~~~~vi~~s~~~~~~~~~l~~~~~ 103 (264)
T 1i36_A 76 AGRH-VRGIYVDINNISPETVRMASSLIE 103 (264)
T ss_dssp HHTT-CCSEEEECSCCCHHHHHHHHHHCS
T ss_pred HHHh-cCcEEEEccCCCHHHHHHHHHHHh
Confidence 6553 232455555665444455666665
No 205
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=78.69 E-value=3.1 Score=46.73 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=58.8
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEe--cCCCCCcccccc---------------ccccchhh--hcccCCCcEE
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGV--NPKKNGQKFEEI---------------PIFDTVKN--AKNETGATVS 382 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pV--nP~~~g~~i~G~---------------~~y~sl~d--ip~~~~vDla 382 (974)
.|.|.||-.|..+++.|.++.+- .+..+ ..+..|+.+... ..+..+++ .. ..+|++
T Consensus 23 aIvGAtG~vG~ell~lL~~hp~~---el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~--~~~Dvv 97 (381)
T 3hsk_A 23 GVLGATGSVGQRFILLLSKHPEF---EIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNF--LECDVV 97 (381)
T ss_dssp EEETTTSHHHHHHHHHHTTCSSE---EEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTG--GGCSEE
T ss_pred EEECCCChHHHHHHHHHHcCCCc---eEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhc--ccCCEE
Confidence 46799988999988877776644 45544 354445544210 01111111 11 268999
Q ss_pred EEEecchhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 383 VIYVPAIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 383 vi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
+.++|.....+.+.++.++|++ +|-+|+.|.
T Consensus 98 f~alp~~~s~~~~~~~~~~G~~-VIDlSa~fR 128 (381)
T 3hsk_A 98 FSGLDADVAGDIEKSFVEAGLA-VVSNAKNYR 128 (381)
T ss_dssp EECCCHHHHHHHHHHHHHTTCE-EEECCSTTT
T ss_pred EECCChhHHHHHHHHHHhCCCE-EEEcCCccc
Confidence 9999999999999999999998 577787664
No 206
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.23 E-value=2.7 Score=44.56 Aligned_cols=87 Identities=10% Similarity=0.100 Sum_probs=58.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccc--cccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIP--IFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~--~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .+.+|..+.+.+.+.|++ |+.++++. +.. .|.+ ++.+++++ . ..|++++++|+..+.+++
T Consensus 5 iiG-~G~~G~~~a~~l~~~g~~----V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~-~--~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 5 VVG-LGLIGASLAGDLRRRGHY----LIGVSRQQ--STCEKAVERQLVDEAGQDLSLL-Q--TAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHHTTSCSEEESCGGGG-T--TCSEEEECSCHHHHHHHH
T ss_pred EEc-CcHHHHHHHHHHHHCCCE----EEEEECCH--HHHHHHHhCCCCccccCCHHHh-C--CCCEEEEECCHHHHHHHH
Confidence 456 567888888888888875 66677653 221 2442 46778887 5 799999999999999999
Q ss_pred HHHHHc-CCcEEEEEcCCCChHHHH
Q psy3769 396 WEAIES-ELELVICITEGIPVRDML 419 (974)
Q Consensus 396 ~e~~~~-gv~~~vi~s~G~~e~~~~ 419 (974)
++.... .-..+++-.++......+
T Consensus 75 ~~l~~~~~~~~~vv~~~~~~~~~~~ 99 (279)
T 2f1k_A 75 EKLIPHLSPTAIVTDVASVKTAIAE 99 (279)
T ss_dssp HHHGGGSCTTCEEEECCSCCHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCcHHHHH
Confidence 887543 233444444555544333
No 207
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=76.65 E-value=2.6 Score=46.66 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=49.7
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecc-hhHHHHH-HHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAI-WEAIE- 400 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v-~e~~~- 400 (974)
+| .|..|..+.+.+..+|++ |+..+|.. ..-.+...+.|++++-+ ..|++++++|. +.+...+ ++..+
T Consensus 177 IG-lG~IG~~vA~~l~~~G~~----V~~~dr~~--~~~~~~~~~~sl~ell~--~aDvVil~vP~t~~t~~li~~~~l~~ 247 (340)
T 4dgs_A 177 LG-LGQIGRALASRAEAFGMS----VRYWNRST--LSGVDWIAHQSPVDLAR--DSDVLAVCVAASAATQNIVDASLLQA 247 (340)
T ss_dssp EC-CSHHHHHHHHHHHTTTCE----EEEECSSC--CTTSCCEECSSHHHHHH--TCSEEEECC----------CHHHHHH
T ss_pred EC-CCHHHHHHHHHHHHCCCE----EEEEcCCc--ccccCceecCCHHHHHh--cCCEEEEeCCCCHHHHHHhhHHHHhc
Confidence 44 256888899999888876 77778775 34455666789999977 89999999994 3344444 23322
Q ss_pred cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 401 SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 401 ~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
..-.++++-.+--+-.+++.|.+..+ +..+.
T Consensus 248 mk~gailIN~aRG~vvde~aL~~aL~--~g~i~ 278 (340)
T 4dgs_A 248 LGPEGIVVNVARGNVVDEDALIEALK--SGTIA 278 (340)
T ss_dssp TTTTCEEEECSCC----------------CCSS
T ss_pred CCCCCEEEECCCCcccCHHHHHHHHH--cCCce
Confidence 33334333332222334555666666 55443
No 208
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=75.97 E-value=1.9 Score=49.49 Aligned_cols=120 Identities=10% Similarity=0.059 Sum_probs=74.1
Q ss_pred ccccccchhhhcccCCCcEEEEEecc-hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCcc
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPA-IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPG 441 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G 441 (974)
+.+.|.+++++.+..++|++++++|. +...+.+.+|+++|. ++++-.......+..+|.+.|+ ++|..+.-..+.|
T Consensus 63 ~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenkal~a~~~~eL~~~A~--~~gv~l~~Ea~V~ 139 (444)
T 3mtj_A 63 GLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANKHLVAKYGNEIFAAAQ--AKGVMVTFEAAVA 139 (444)
T ss_dssp TCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCHHHHHHHHHHHHHHHH--HHTCCEECGGGSS
T ss_pred cCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCcccCHHHHHHHHHHHH--HhCCeEEEEEeee
Confidence 56788999998765679999999996 788899999999994 4444222211223468999999 8998885222222
Q ss_pred ccccCcc-ccccCCCCCCCCCCEEEEe--CChhhHHHHHHHHHHcCCceEEEe
Q psy3769 442 LIVPEEI-KIGIMPGNIHKKGRIGVVS--RSGTLTYEVVCQLTELGFGQSSAV 491 (974)
Q Consensus 442 ~~~~~~~-~~~~~~~~~~~~G~va~vS--QSG~~~~~~~~~~~~~g~g~s~~v 491 (974)
-..|.-+ +. .....|.|+=|. -||+..+-+ ....+.|..|+.++
T Consensus 140 ~giPii~~Lr-----elL~~~~Ig~I~GIlnGT~nyil-t~m~~~g~~f~~~l 186 (444)
T 3mtj_A 140 GGIPIIKALR-----EGLTANRIEWLAGIINGTSNFIL-SEMRDKGAAFDDVL 186 (444)
T ss_dssp TTSCHHHHHH-----TTTTTSCEEEEEEECCHHHHHHH-HHHHHHCCCHHHHH
T ss_pred CChHHHHHHH-----HHHhCCCCceEEEEEcCCccccc-ccCCCCCCCHHHHH
Confidence 2223211 11 112345665554 477766544 33444566665544
No 209
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=75.80 E-value=5.4 Score=44.23 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=49.9
Q ss_pred ccccccchhhhcccCCCcEEEEEe-cc-----hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYV-PA-----IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~v-p~-----~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
|+|.+.|++++.+ ..+|++++.+ |. +...+.+++|+++|..- +-.......+..++.+.|+ ++|..+++
T Consensus 75 gipv~~d~~~al~-~~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nV--vsglh~~l~~~pel~~~A~--~~Gv~i~d 149 (350)
T 2g0t_A 75 DVPVVSSVEKAKE-MGAEVLIIGVSNPGGYLEEQIATLVKKALSLGMDV--ISGLHFKISQQTEFLKIAH--ENGTRIID 149 (350)
T ss_dssp CCBEESSHHHHHH-TTCCEEEECCCSCCHHHHHHHHHHHHHHHHTTCEE--EECCCC--CCHHHHHHHHH--HHTCCEEE
T ss_pred CceeeCCHHHHHh-cCCCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcE--EeCChhhhhCCHHHHHHHH--HCCCEEEE
Confidence 6999999999874 3699999986 22 24558899999999873 3222323344456888899 88888876
Q ss_pred c
Q psy3769 437 P 437 (974)
Q Consensus 437 P 437 (974)
=
T Consensus 150 v 150 (350)
T 2g0t_A 150 I 150 (350)
T ss_dssp S
T ss_pred e
Confidence 3
No 210
>1pm3_A MTH1895; unknown function, structural genomics, PSI, protein structure initiative; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.41.1.2
Probab=75.40 E-value=2 Score=38.60 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=24.7
Q ss_pred Cceee-ccccCeEEEecCCcEeEEEEEeecC
Q psy3769 937 DTFYW-FNLIDCIVENIHGKLLGTVTEIIQN 966 (974)
Q Consensus 937 ~e~y~-~DLiG~~V~d~~g~~lG~V~~v~~~ 966 (974)
..... ++|.|.+|+|.+|+.||+|.|+.=.
T Consensus 19 ~~Mr~~seL~Gk~Vin~dG~~LG~V~Dv~iD 49 (97)
T 1pm3_A 19 SHMRIVEEMVGKEVLDSSAKVIGKVKDVEVD 49 (97)
T ss_dssp -CEETTTTSSSCEEECTTSCEEEEEEEEEEE
T ss_pred eEEEeehhCCCCEeECCCCCEEeEEEEEEEE
Confidence 34555 7999999999999999999998643
No 211
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=74.58 E-value=26 Score=36.85 Aligned_cols=98 Identities=10% Similarity=0.019 Sum_probs=62.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccc--cccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIP--IFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~--~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .|.+|..+.+.+.+.|+.. .|+.++++. +.. .|.. .+.+++++.+. ..|++++++|+....+++
T Consensus 6 iIG-~G~mG~~~a~~l~~~g~~~--~V~~~d~~~--~~~~~~~~~g~~~~~~~~~~~~~~~-~aDvVilavp~~~~~~v~ 79 (281)
T 2g5c_A 6 IVG-VGFMGGSFAKSLRRSGFKG--KIYGYDINP--ESISKAVDLGIIDEGTTSIAKVEDF-SPDFVMLSSPVRTFREIA 79 (281)
T ss_dssp EES-CSHHHHHHHHHHHHTTCCS--EEEEECSCH--HHHHHHHHTTSCSEEESCGGGGGGT-CCSEEEECSCHHHHHHHH
T ss_pred EEe-cCHHHHHHHHHHHhcCCCc--EEEEEeCCH--HHHHHHHHCCCcccccCCHHHHhcC-CCCEEEEcCCHHHHHHHH
Confidence 456 5678888888888888742 477787763 221 2443 35566555321 589999999999999998
Q ss_pred HHHHH-cCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 396 WEAIE-SELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 396 ~e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
++... ..-+.+++..++......+++.+...
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILG 111 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcc
Confidence 88764 23344555545554433344555554
No 212
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=74.56 E-value=1.2 Score=46.58 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=59.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc------ccccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK------FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~------i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+..|..+.+.+.+.|+..+..|+.++++. +. -.|+..+.+..++.+ ..|++++++|+..+.++++
T Consensus 7 iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~--~~~~~~~~~~g~~~~~~~~e~~~--~aDvVilav~~~~~~~v~~ 81 (247)
T 3gt0_A 7 FIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNT--ANLKNASEKYGLTTTTDNNEVAK--NADILILSIKPDLYASIIN 81 (247)
T ss_dssp EEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCH--HHHHHHHHHHCCEECSCHHHHHH--HCSEEEECSCTTTHHHHC-
T ss_pred EEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCH--HHHHHHHHHhCCEEeCChHHHHH--hCCEEEEEeCHHHHHHHHH
Confidence 356 567888888999988971111377777763 21 238888889988766 6899999999999999988
Q ss_pred HHHHc-CCcEEEE-EcCCCChH
Q psy3769 397 EAIES-ELELVIC-ITEGIPVR 416 (974)
Q Consensus 397 e~~~~-gv~~~vi-~s~G~~e~ 416 (974)
+.... .-..+++ .++|.+.+
T Consensus 82 ~l~~~l~~~~~vvs~~~gi~~~ 103 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAGKSIE 103 (247)
T ss_dssp --CCSSCTTCEEEECSCCSCHH
T ss_pred HHHhhcCCCCEEEEecCCCCHH
Confidence 76542 2233333 66788744
No 213
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=72.64 E-value=4 Score=44.53 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=59.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC---Cccc--cccccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN---GQKF--EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~---g~~i--~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|+| .|.+|..+..+|.+.|+..+..|+.++++.. -+.+ .|+....+..++.+ ..|++++++|+..+.+++++
T Consensus 27 iIG-~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~--~aDvVilav~~~~~~~vl~~ 103 (322)
T 2izz_A 27 FIG-AGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQ--HSDVLFLAVKPHIIPFILDE 103 (322)
T ss_dssp EES-CSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHH--HCSEEEECSCGGGHHHHHHH
T ss_pred EEC-CCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhc--cCCEEEEEeCHHHHHHHHHH
Confidence 357 4678888888998888310003677777641 0111 37777777777765 68999999999999999988
Q ss_pred HHHc-CCc-EEEEEcCCCChH
Q psy3769 398 AIES-ELE-LVICITEGIPVR 416 (974)
Q Consensus 398 ~~~~-gv~-~~vi~s~G~~e~ 416 (974)
.... .-. .++-++.|.+.+
T Consensus 104 l~~~l~~~~ivvs~s~gi~~~ 124 (322)
T 2izz_A 104 IGADIEDRHIVVSCAAGVTIS 124 (322)
T ss_dssp HGGGCCTTCEEEECCTTCCHH
T ss_pred HHhhcCCCCEEEEeCCCCCHH
Confidence 7542 222 334455788754
No 214
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=72.21 E-value=4.6 Score=44.60 Aligned_cols=86 Identities=13% Similarity=0.127 Sum_probs=56.3
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCC---CCCcccc-------c---ccccc--chhhhcccCCCcEEEEEe
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPK---KNGQKFE-------E---IPIFD--TVKNAKNETGATVSVIYV 386 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~---~~g~~i~-------G---~~~y~--sl~dip~~~~vDlavi~v 386 (974)
|.|.||..|..+++.|.++. |+ .+.....+ ..|+.+. | +++-+ +.+++.+ .+|+++.++
T Consensus 9 IvGatG~vG~~l~~~L~~~p~~e---l~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~--~~Dvvf~a~ 83 (337)
T 3dr3_A 9 IVGASGYAGAELVTYVNRHPHMN---ITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSP--GVDVVFLAT 83 (337)
T ss_dssp EETTTSHHHHHHHHHHHHCTTEE---EEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCT--TCSEEEECS
T ss_pred EECCCChHHHHHHHHHHhCCCCc---EEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhc--CCCEEEECC
Confidence 57888888888888777643 33 22222222 2233322 2 11111 3334423 799999999
Q ss_pred cchhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 387 PAIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 387 p~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
|.....+.+.++.++|++ +|-+|+.|.
T Consensus 84 p~~~s~~~~~~~~~~g~~-vIDlSa~fR 110 (337)
T 3dr3_A 84 AHEVSHDLAPQFLEAGCV-VFDLSGAFR 110 (337)
T ss_dssp CHHHHHHHHHHHHHTTCE-EEECSSTTS
T ss_pred ChHHHHHHHHHHHHCCCE-EEEcCCccc
Confidence 999999999999999998 578888775
No 215
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=71.34 E-value=1.8 Score=46.26 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=51.3
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
.|+|.+|..|..+.+.+.+.|++ |+.++++. +.. .|+.+. +..++.+ ..|++++++|+..+.++++
T Consensus 15 ~iIG~tG~mG~~la~~l~~~g~~----V~~~~r~~--~~~~~~~~~g~~~~-~~~~~~~--~aDvVi~av~~~~~~~v~~ 85 (286)
T 3c24_A 15 AILGAGGKMGARITRKIHDSAHH----LAAIEIAP--EGRDRLQGMGIPLT-DGDGWID--EADVVVLALPDNIIEKVAE 85 (286)
T ss_dssp EEETTTSHHHHHHHHHHHHSSSE----EEEECCSH--HHHHHHHHTTCCCC-CSSGGGG--TCSEEEECSCHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhCCCE----EEEEECCH--HHHHHHHhcCCCcC-CHHHHhc--CCCEEEEcCCchHHHHHHH
Confidence 35787788999999999988875 66777653 221 254443 5556554 7899999999999998888
Q ss_pred HHHH
Q psy3769 397 EAIE 400 (974)
Q Consensus 397 e~~~ 400 (974)
+...
T Consensus 86 ~l~~ 89 (286)
T 3c24_A 86 DIVP 89 (286)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 7754
No 216
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=71.09 E-value=1.5 Score=45.98 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=55.2
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCCCcc---c---cccccccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKNGQK---F---EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~g~~---i---~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .+..|..+.+.+.+.| ++ |+.++++. +. . .|+..+.+..++. ..|++++++|+..+.+++
T Consensus 5 iiG-~G~mG~~~a~~l~~~g~~~----v~~~~r~~--~~~~~~~~~~g~~~~~~~~~~~---~~D~vi~~v~~~~~~~v~ 74 (263)
T 1yqg_A 5 FLG-GGNMAAAVAGGLVKQGGYR----IYIANRGA--EKRERLEKELGVETSATLPELH---SDDVLILAVKPQDMEAAC 74 (263)
T ss_dssp EEC-CSHHHHHHHHHHHHHCSCE----EEEECSSH--HHHHHHHHHTCCEEESSCCCCC---TTSEEEECSCHHHHHHHH
T ss_pred EEC-chHHHHHHHHHHHHCCCCe----EEEECCCH--HHHHHHHHhcCCEEeCCHHHHh---cCCEEEEEeCchhHHHHH
Confidence 456 4678888888888888 54 67777653 21 1 2777777776653 589999999988888887
Q ss_pred HHHHHcCCcEEEE-EcCCCCh
Q psy3769 396 WEAIESELELVIC-ITEGIPV 415 (974)
Q Consensus 396 ~e~~~~gv~~~vi-~s~G~~e 415 (974)
++... . +.+++ +++|.+.
T Consensus 75 ~~l~~-~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 75 KNIRT-N-GALVLSVAAGLSV 93 (263)
T ss_dssp TTCCC-T-TCEEEECCTTCCH
T ss_pred HHhcc-C-CCEEEEecCCCCH
Confidence 76543 3 44333 3478775
No 217
>1sqr_A 50S ribosomal protein L35AE; PFR48, structure, autostructure, northeast structural genomics consortium, beta-barrel; NMR {Pyrococcus furiosus} SCOP: b.43.3.3 PDB: 2lp6_A
Probab=71.06 E-value=4.1 Score=36.20 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=24.5
Q ss_pred CCEEEEEecCCCCHHHHHhhcCCEEEE
Q psy3769 899 GNYVLANLYGITDRNLATKLQGYYLKI 925 (974)
Q Consensus 899 ~~~~lvkf~gi~~re~Ae~L~g~~l~v 925 (974)
.+..|+|+||++|+|+|+.+.|..+..
T Consensus 19 ~~~aLlkIegV~~k~~a~fYlGKrvay 45 (95)
T 1sqr_A 19 NNVMIIKPLDVNSREEASKLIGRLVLW 45 (95)
T ss_dssp CCEEEEEESCCCCHHHHHHHTTCEEEE
T ss_pred CceEEEEEcCCCCHHHHHhhcCCeEEE
Confidence 567899999999999999999998765
No 218
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=70.25 E-value=6 Score=45.16 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=41.4
Q ss_pred cccccchhhhcccCCCcEEEEEecch-----------hHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAI-----------FATSAIWEAIESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~-----------~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+.+-.+++++.+ ..|++++++|.. .+.+++++..+..-..+|+..+..+....+++.+.+.
T Consensus 97 l~~ttd~~ea~~--~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~ 168 (432)
T 3pid_A 97 FRATTDKHDAYR--NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLG 168 (432)
T ss_dssp EEEESCHHHHHT--TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHT
T ss_pred eEEEcCHHHHHh--CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHh
Confidence 455566666655 789999999986 4677776666544455677777776545566666666
No 219
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=70.05 E-value=4.7 Score=44.69 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=54.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEec--CCCCCcccc---c-----------cc-ccc--chhhhcccCCCcEEE
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVN--PKKNGQKFE---E-----------IP-IFD--TVKNAKNETGATVSV 383 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVn--P~~~g~~i~---G-----------~~-~y~--sl~dip~~~~vDlav 383 (974)
|.|.+|..|..+++.|.++..- .+..++ .+..|+.+. + .. .+. +.+++ . .+|+++
T Consensus 9 IiGAtG~iG~~llr~L~~~p~~---elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~vDvVf 82 (350)
T 2ep5_A 9 LLGSTGMVGQKMVKMLAKHPYL---ELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYEDH-K--DVDVVL 82 (350)
T ss_dssp EESCSSHHHHHHHHHHTTCSSE---EEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGGG-T--TCSEEE
T ss_pred EECcCCHHHHHHHHHHHhCCCc---EEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHHh-c--CCCEEE
Confidence 5677888888888887765432 466665 222122221 1 10 112 22333 2 799999
Q ss_pred EEecchhHHHHHHHHHHcCCcEEEEEcCCC
Q psy3769 384 IYVPAIFATSAIWEAIESELELVICITEGI 413 (974)
Q Consensus 384 i~vp~~~v~~~v~e~~~~gv~~~vi~s~G~ 413 (974)
+++|.....+.+..+.++|++ +|-.++.|
T Consensus 83 ~atp~~~s~~~a~~~~~aG~~-VId~s~~~ 111 (350)
T 2ep5_A 83 SALPNELAESIELELVKNGKI-VVSNASPF 111 (350)
T ss_dssp ECCCHHHHHHHHHHHHHTTCE-EEECSSTT
T ss_pred ECCChHHHHHHHHHHHHCCCE-EEECCccc
Confidence 999999999999999999998 56666554
No 220
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=69.02 E-value=3.8 Score=42.05 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=53.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------cccccccchhhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|+| .+.+|..+.+.+.+.|++ ++..++++. +.. .|...+.+..+..+ ..|++++++|+..+.++++
T Consensus 28 IIG-~G~mG~~la~~l~~~g~~---V~~v~~r~~--~~~~~l~~~~g~~~~~~~~~~~~--~aDvVilavp~~~~~~v~~ 99 (220)
T 4huj_A 28 IIG-AGAIGSALAERFTAAQIP---AIIANSRGP--ASLSSVTDRFGASVKAVELKDAL--QADVVILAVPYDSIADIVT 99 (220)
T ss_dssp EEE-CHHHHHHHHHHHHHTTCC---EEEECTTCG--GGGHHHHHHHTTTEEECCHHHHT--TSSEEEEESCGGGHHHHHT
T ss_pred EEC-CCHHHHHHHHHHHhCCCE---EEEEECCCH--HHHHHHHHHhCCCcccChHHHHh--cCCEEEEeCChHHHHHHHH
Confidence 356 567888888889888887 333266553 221 25555555544443 6899999999999999888
Q ss_pred HHHHcCCcEEEEEcCCC
Q psy3769 397 EAIESELELVICITEGI 413 (974)
Q Consensus 397 e~~~~gv~~~vi~s~G~ 413 (974)
+.....-+.++-++.|+
T Consensus 100 ~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 100 QVSDWGGQIVVDASNAI 116 (220)
T ss_dssp TCSCCTTCEEEECCCCB
T ss_pred HhhccCCCEEEEcCCCC
Confidence 76432223445555566
No 221
>3j21_c 50S ribosomal protein L35AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} PDB: 1sqr_A 2lp6_A
Probab=68.84 E-value=4.2 Score=35.60 Aligned_cols=28 Identities=25% Similarity=0.360 Sum_probs=25.1
Q ss_pred eCCEEEEEecCCCCHHHHHhhcCCEEEE
Q psy3769 898 HGNYVLANLYGITDRNLATKLQGYYLKI 925 (974)
Q Consensus 898 ~~~~~lvkf~gi~~re~Ae~L~g~~l~v 925 (974)
+.+..|+|+||++|+|+|+-+.|..+..
T Consensus 18 ~~~taLlkieGV~~~~~a~fylGKrvay 45 (87)
T 3j21_c 18 HNNVMIIKPLDVNSREEASKLIGRLVLW 45 (87)
T ss_dssp CTTCEEEEESSCCSHHHHGGGTTCEEEE
T ss_pred CCCeEEEEEcCcCCHHHHHhhcCceEEE
Confidence 4567899999999999999999998766
No 222
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=67.25 E-value=9 Score=42.77 Aligned_cols=113 Identities=12% Similarity=0.061 Sum_probs=67.7
Q ss_pred ccccccCcccccchh-hhhccCCCCceEEEEecCCCCCcccc---cc--cccc--chhhhcccCCCcEEEEEecchhHHH
Q psy3769 322 NIFGITGKTGRFHTN-LCLNYGNGKKAFVAGVNPKKNGQKFE---EI--PIFD--TVKNAKNETGATVSVIYVPAIFATS 393 (974)
Q Consensus 322 ni~G~~~k~G~~v~~-~l~~~g~~g~~~V~pVnP~~~g~~i~---G~--~~y~--sl~dip~~~~vDlavi~vp~~~v~~ 393 (974)
.|.|.+|..|..+++ -+.+++|.-- .++.+..+..|+.+. |. ++.. +.++. . .+|+++.++|.....+
T Consensus 5 aIvGAtG~vG~~llr~ll~~~~~~~v-~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~~-~--~~DvVf~a~g~~~s~~ 80 (367)
T 1t4b_A 5 GFIGWRGMVGSVLMQRMVEERDFDAI-RPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEAL-K--ALDIIVTCQGGDYTNE 80 (367)
T ss_dssp EEESTTSHHHHHHHHHHHHTTGGGGS-EEEEEESSSTTSBCCGGGTCCCBCEETTCHHHH-H--TCSEEEECSCHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhcCCCCeE-EEEEEEeCCCCCCccccCCCceEEEecCChHHh-c--CCCEEEECCCchhHHH
Confidence 357888899999999 4445565421 466665543344432 22 1211 12232 2 6999999999999999
Q ss_pred HHHHHHHcCCcEEEEE-cCCCC----------hHHHHHHHHHHhcCCCCc-eEEccCCcc
Q psy3769 394 AIWEAIESELELVICI-TEGIP----------VRDMLILKNKMKKNNSKT-LLLGPNCPG 441 (974)
Q Consensus 394 ~v~e~~~~gv~~~vi~-s~G~~----------e~~~~~l~~~a~~~~~gi-~viGPnc~G 441 (974)
....+.++|+|.+||= ++.|. |--.+++. .++ ..|+ .+..|||.-
T Consensus 81 ~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~-~~~--~~g~~~Ianp~Ctt 137 (367)
T 1t4b_A 81 IYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT-DGL--NNGIRTFVGGNCTV 137 (367)
T ss_dssp HHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHH-HHH--HTTCCEEEECCHHH
T ss_pred HHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHh-hhh--hcCCCEEEeCCHHH
Confidence 9999999999753333 23332 11123332 332 2464 577999963
No 223
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=66.83 E-value=3.2 Score=45.45 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=59.2
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccc---cchhhhcccCCCcEEEEEecc-hhHHHHH-HHHHH-c
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIF---DTVKNAKNETGATVSVIYVPA-IFATSAI-WEAIE-S 401 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y---~sl~dip~~~~vDlavi~vp~-~~v~~~v-~e~~~-~ 401 (974)
|..|..+.+.+..+|++ |...++.. ....+...+ .+++++-+ ..|++++++|. +.+...+ ++..+ .
T Consensus 148 G~IG~~vA~~l~~~G~~----V~~~dr~~--~~~~~~~~~~~~~~l~ell~--~aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 148 GVLGAKVAESLQAWGFP----LRCWSRSR--KSWPGVESYVGREELRAFLN--QTRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp SHHHHHHHHHHHTTTCC----EEEEESSC--CCCTTCEEEESHHHHHHHHH--TCSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CHHHHHHHHHHHHCCCE----EEEEcCCc--hhhhhhhhhcccCCHHHHHh--hCCEEEEecCCchhhhhhccHHHHhhC
Confidence 56888899999988987 66676654 344555544 57888876 78999999995 3455555 33333 2
Q ss_pred CCcEEEEEcCCC-ChHHHHHHHHHHhcCCCCce
Q psy3769 402 ELELVICITEGI-PVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 402 gv~~~vi~s~G~-~e~~~~~l~~~a~~~~~gi~ 433 (974)
.-.+ +++..+- +-.+++.|.+..+ +..+.
T Consensus 220 k~ga-ilIN~aRG~~vd~~aL~~aL~--~g~i~ 249 (315)
T 3pp8_A 220 PDGA-YVLNLARGVHVQEADLLAALD--SGKLK 249 (315)
T ss_dssp CTTE-EEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred CCCC-EEEECCCChhhhHHHHHHHHH--hCCcc
Confidence 3344 4444332 2234555666666 55444
No 224
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=66.76 E-value=4.8 Score=44.28 Aligned_cols=47 Identities=9% Similarity=0.007 Sum_probs=37.7
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCC
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGI 413 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~ 413 (974)
++++|.+.+++.. .+|++++++|.....+..+.|+++|.+ |+++...
T Consensus 66 ~~~v~~d~~~l~~--~vDvV~~aTp~~~h~~~a~~~l~aGk~--Vi~sap~ 112 (334)
T 2czc_A 66 GFEVAGTLNDLLE--KVDIIVDATPGGIGAKNKPLYEKAGVK--AIFQGGE 112 (334)
T ss_dssp TCCCSCBHHHHHT--TCSEEEECCSTTHHHHHHHHHHHHTCE--EEECTTS
T ss_pred ceEEcCcHHHhcc--CCCEEEECCCccccHHHHHHHHHcCCc--eEeeccc
Confidence 4577888999876 899999999998878888899999954 4466544
No 225
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=66.49 E-value=3.5 Score=45.78 Aligned_cols=65 Identities=15% Similarity=0.333 Sum_probs=48.7
Q ss_pred ccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCC
Q psy3769 367 FDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNC 439 (974)
Q Consensus 367 y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc 439 (974)
..++.++.. ..|+++.++|+..-..+++.|++.|+.. +=+| ... +...++.+.|+ ++|++++ |.|
T Consensus 68 ~~~l~~~~~--~~DvVi~~~p~~~~~~v~~~~~~~g~~y-vD~s-~~~-~~~~~l~~~a~--~~g~~~i-~~~ 132 (365)
T 3abi_A 68 FDKLVEVMK--EFELVIGALPGFLGFKSIKAAIKSKVDM-VDVS-FMP-ENPLELRDEAE--KAQVTIV-FDA 132 (365)
T ss_dssp HHHHHHHHT--TCSEEEECCCGGGHHHHHHHHHHHTCEE-EECC-CCS-SCGGGGHHHHH--HTTCEEE-CCC
T ss_pred HHHHHHHHh--CCCEEEEecCCcccchHHHHHHhcCcce-Eeee-ccc-hhhhhhhhhhc--cCCceee-ecC
Confidence 346666655 7899999999999999999999999875 3333 222 23455678888 8899888 555
No 226
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=66.31 E-value=4.4 Score=44.56 Aligned_cols=68 Identities=10% Similarity=-0.059 Sum_probs=47.6
Q ss_pred chhhhcccCCCcEEEEEecch----hHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCc
Q psy3769 369 TVKNAKNETGATVSVIYVPAI----FATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCP 440 (974)
Q Consensus 369 sl~dip~~~~vDlavi~vp~~----~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~ 440 (974)
+.+++- ..++|++++++|.. ...+.+.+|+++|. ++++-....--.+..+|.+.|+ ++|+++.-..+.
T Consensus 78 d~~~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk-hVvtanK~pla~~~~eL~~~A~--~~gv~~~~ea~v 149 (331)
T 3c8m_A 78 SASEAL-ARDFDIVVDATPASADGKKELAFYKETFENGK-DVVTANKSGLANFWPEIMEYAR--SNNRRIRYEATV 149 (331)
T ss_dssp CHHHHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC-EEEECCCHHHHHHHHHHHHHHH--HHTCCEECGGGS
T ss_pred CHHHHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCC-eEEecCchhhHHHHHHHHHHHH--HcCCEEEEEeec
Confidence 788776 45899999999985 67789999999994 4444322211133468899999 888876543333
No 227
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=66.01 E-value=4 Score=45.09 Aligned_cols=42 Identities=14% Similarity=0.084 Sum_probs=33.5
Q ss_pred chhhhc-ccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 369 TVKNAK-NETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 369 sl~dip-~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+.+++| ....+|+++.++|.....+....++++|+|.+ +++.
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~V-VIs~ 125 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKV-VISA 125 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEE-EESS
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEE-EEec
Confidence 566664 11279999999999999999999999999874 5554
No 228
>1eys_H Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: b.41.1.1 f.23.10.1
Probab=66.01 E-value=3.8 Score=43.23 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=21.4
Q ss_pred ccccCeEEEecCCcEeEEEEEee
Q psy3769 942 FNLIDCIVENIHGKLLGTVTEII 964 (974)
Q Consensus 942 ~DLiG~~V~d~~g~~lG~V~~v~ 964 (974)
.||+|++|++.+|+.+|+|.+++
T Consensus 149 ~dl~G~~Vya~DGekIG~V~Dv~ 171 (259)
T 1eys_H 149 PDPRGMTVVGLDGEVAGTVSDVW 171 (259)
T ss_dssp CCCTTCEEECSSSCEEEEEEEEE
T ss_pred CCCcCCEEEeCCCCeeEEEEEEE
Confidence 57999999999999999999987
No 229
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=65.71 E-value=2.4 Score=45.91 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=61.1
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecc-hhHHHHH-HHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAI-WEAIE- 400 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v-~e~~~- 400 (974)
+| .|..|..+.+.+...|++ |...+|.. +.........+++++-+ ..|++++++|. +.+...+ ++..+
T Consensus 128 IG-lG~IG~~vA~~l~~~G~~----V~~~dr~~--~~~~~~~~~~~l~ell~--~aDiV~l~~P~t~~t~~li~~~~l~~ 198 (290)
T 3gvx_A 128 LG-YGGIGRRVAHLAKAFGMR----VIAYTRSS--VDQNVDVISESPADLFR--QSDFVLIAIPLTDKTRGMVNSRLLAN 198 (290)
T ss_dssp EC-CSHHHHHHHHHHHHHTCE----EEEECSSC--CCTTCSEECSSHHHHHH--HCSEEEECCCCCTTTTTCBSHHHHTT
T ss_pred ec-cCchhHHHHHHHHhhCcE----EEEEeccc--cccccccccCChHHHhh--ccCeEEEEeeccccchhhhhHHHHhh
Confidence 45 356888899999988986 77788875 44444556679999876 78999999995 3444333 23332
Q ss_pred cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 401 SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 401 ~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
..-.++++-.+--+..++++|.+..+ +.++.
T Consensus 199 mk~gailIN~aRG~~vd~~aL~~aL~--~g~i~ 229 (290)
T 3gvx_A 199 ARKNLTIVNVARADVVSKPDMIGFLK--ERSDV 229 (290)
T ss_dssp CCTTCEEEECSCGGGBCHHHHHHHHH--HCTTC
T ss_pred hhcCceEEEeehhcccCCcchhhhhh--hccce
Confidence 23334344333222234455666666 55444
No 230
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=65.04 E-value=9.2 Score=42.54 Aligned_cols=86 Identities=17% Similarity=0.058 Sum_probs=55.7
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEe-cCCCCCccccc----------------ccccc-chhhhcccCCCcEEE
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGV-NPKKNGQKFEE----------------IPIFD-TVKNAKNETGATVSV 383 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pV-nP~~~g~~i~G----------------~~~y~-sl~dip~~~~vDlav 383 (974)
.|.|.||-.|..+++.|.++.+- .+..+ .++..|+.+.. +.+.. +.+++ ..+|+++
T Consensus 11 aIvGATGyvG~eLlrlL~~hP~~---el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~---~~vDvvf 84 (359)
T 4dpl_A 11 AILGATGLVGIEYVRMLSNHPYI---KPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM---DDVDIIF 84 (359)
T ss_dssp EETTTTSTTHHHHHHHHTTCSSE---EEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC---TTCCEEE
T ss_pred EEECCCCHHHHHHHHHHHhCCCc---eEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh---cCCCEEE
Confidence 35788888888888876665533 34433 33333433321 11110 11122 2789999
Q ss_pred EEecchhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 384 IYVPAIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 384 i~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
.|+|.....+.+.++.++|++ +|-+|+-|.
T Consensus 85 ~a~p~~~s~~~a~~~~~~G~~-vIDlSa~~R 114 (359)
T 4dpl_A 85 SPLPQGAAGPVEEQFAKEGFP-VISNSPDHR 114 (359)
T ss_dssp ECCCTTTHHHHHHHHHHTTCE-EEECSSTTT
T ss_pred ECCChHHHHHHHHHHHHCCCE-EEEcCCCcc
Confidence 999999999999999999998 578887664
No 231
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=65.04 E-value=9.2 Score=42.54 Aligned_cols=86 Identities=17% Similarity=0.058 Sum_probs=55.7
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEe-cCCCCCccccc----------------ccccc-chhhhcccCCCcEEE
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGV-NPKKNGQKFEE----------------IPIFD-TVKNAKNETGATVSV 383 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pV-nP~~~g~~i~G----------------~~~y~-sl~dip~~~~vDlav 383 (974)
.|.|.||-.|..+++.|.++.+- .+..+ .++..|+.+.. +.+.. +.+++ ..+|+++
T Consensus 11 aIvGATGyvG~eLlrlL~~hP~~---el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~---~~vDvvf 84 (359)
T 4dpk_A 11 AILGATGLVGIEYVRMLSNHPYI---KPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLM---DDVDIIF 84 (359)
T ss_dssp EETTTTSTTHHHHHHHHTTCSSE---EEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGC---TTCCEEE
T ss_pred EEECCCCHHHHHHHHHHHhCCCc---eEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHh---cCCCEEE
Confidence 35788888888888876665533 34433 33333433321 11110 11122 2789999
Q ss_pred EEecchhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 384 IYVPAIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 384 i~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
.|+|.....+.+.++.++|++ +|-+|+-|.
T Consensus 85 ~a~p~~~s~~~a~~~~~~G~~-vIDlSa~~R 114 (359)
T 4dpk_A 85 SPLPQGAAGPVEEQFAKEGFP-VISNSPDHR 114 (359)
T ss_dssp ECCCTTTHHHHHHHHHHTTCE-EEECSSTTT
T ss_pred ECCChHHHHHHHHHHHHCCCE-EEEcCCCcc
Confidence 999999999999999999998 578887664
No 232
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=64.89 E-value=5.5 Score=44.27 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=53.9
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCC-Cccc----------------cccccccchhhhcccCCCcEEEEEe
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQKF----------------EEIPIFDTVKNAKNETGATVSVIYV 386 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~i----------------~G~~~y~sl~dip~~~~vDlavi~v 386 (974)
+| .+.+|..+...|.+.|++ |..++.+.. -+.+ .++.+..+++++.+ ..|++++++
T Consensus 35 IG-aG~mG~alA~~La~~G~~----V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~--~aDvVilaV 107 (356)
T 3k96_A 35 LG-AGSWGTALALVLARKGQK----VRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE--GVTDILIVV 107 (356)
T ss_dssp EC-CSHHHHHHHHHHHTTTCC----EEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT--TCCEEEECC
T ss_pred EC-ccHHHHHHHHHHHHCCCe----EEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh--cCCEEEECC
Confidence 46 356777777777777776 444444310 0000 12345567777655 789999999
Q ss_pred cchhHHHHHHHHHHc-CC-cEEEEEcCCCChH
Q psy3769 387 PAIFATSAIWEAIES-EL-ELVICITEGIPVR 416 (974)
Q Consensus 387 p~~~v~~~v~e~~~~-gv-~~~vi~s~G~~e~ 416 (974)
|+..+.+++++.... .- ..++.++.|+...
T Consensus 108 p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 108 PSFAFHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 999999998887653 21 2356667787643
No 233
>3htr_A Uncharacterized PRC-barrel domain protein; beta-barrel, photo-reaction-center domain, structural genomics, PSI-2; HET: MSE; 2.06A {Rhodopseudomonas palustris}
Probab=64.19 E-value=3.6 Score=38.39 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=25.0
Q ss_pred CceeeccccCeEEEecCCcEeEEEEEeec
Q psy3769 937 DTFYWFNLIDCIVENIHGKLLGTVTEIIQ 965 (974)
Q Consensus 937 ~e~y~~DLiG~~V~d~~g~~lG~V~~v~~ 965 (974)
.-+-.+||+|.+|++.+|+.||+|.+++-
T Consensus 13 ~l~~~~~l~G~~V~~~dG~~iG~V~dv~i 41 (120)
T 3htr_A 13 KLIGSDKVQGTAVYGPDGEKIGSIERVMI 41 (120)
T ss_dssp SEEEHHHHTTCEEECTTSCEEEEEEEEEE
T ss_pred ceEehhhccCCEEEcCCCCEEEEEEEEEE
Confidence 33556899999999999999999999874
No 234
>4a18_H RPL35A; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_H 4a1b_H 4a1d_H
Probab=64.11 E-value=6 Score=36.23 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=24.1
Q ss_pred eCCEEEEEecCCCCHHHHHhhcCCEEEE
Q psy3769 898 HGNYVLANLYGITDRNLATKLQGYYLKI 925 (974)
Q Consensus 898 ~~~~~lvkf~gi~~re~Ae~L~g~~l~v 925 (974)
+.+..|+|+||++|+|+|+-+.|..+..
T Consensus 31 ~~~taLlKIeGV~~~~~a~fylGKrvay 58 (113)
T 4a18_H 31 NSNQALLKLQNVNTKEDVAFYQGKRVVY 58 (113)
T ss_dssp EEEEEEEEETTCCSHHHHHTTTTCEEEE
T ss_pred CCCeEEEEEcCcCCHHHHHhhcCCeEEE
Confidence 3567899999999999999999997654
No 235
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=63.67 E-value=8.2 Score=41.17 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=54.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc-------ccccccccchhhhcccCCCcEEEEEecc-------
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK-------FEEIPIFDTVKNAKNETGATVSVIYVPA------- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~-------i~G~~~y~sl~dip~~~~vDlavi~vp~------- 388 (974)
|.|.++..|..+.+.|++.|++ |+.+..+.+..+ ...+. ..++.++.+ .+|.++-+...
T Consensus 7 VtGatG~iG~~l~~~L~~~g~~----V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~~~~~ 79 (311)
T 3m2p_A 7 VTGGTGFLGQYVVESIKNDGNT----PIILTRSIGNKAINDYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGSQGKI 79 (311)
T ss_dssp EETTTSHHHHHHHHHHHHTTCE----EEEEESCCC-----CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCSSSCG
T ss_pred EECCCcHHHHHHHHHHHhCCCE----EEEEeCCCCcccCCceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCCCChH
Confidence 5788889999999999998886 444432221111 12333 556677765 89988876532
Q ss_pred -------hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 -------IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 -------~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
..+..+++.|.+.|++.+|.+|+
T Consensus 80 ~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 80 SEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 12467788888899998777775
No 236
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=61.98 E-value=5.7 Score=43.72 Aligned_cols=80 Identities=20% Similarity=0.183 Sum_probs=55.1
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc------ccccccccchhhhcccCCCcEEEEEecchhHHHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK------FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW- 396 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~------i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~- 396 (974)
+| .|..|..+...+.+.|++ |...+++. +. -.|+.++ +++++.. ..|++++++|+....++++
T Consensus 22 IG-~G~mG~alA~~L~~~G~~----V~~~~~~~--~~~~~~a~~~G~~~~-~~~e~~~--~aDvVilavp~~~~~~v~~~ 91 (338)
T 1np3_A 22 IG-YGSQGHAHACNLKDSGVD----VTVGLRSG--SATVAKAEAHGLKVA-DVKTAVA--AADVVMILTPDEFQGRLYKE 91 (338)
T ss_dssp EC-CSHHHHHHHHHHHHTTCC----EEEECCTT--CHHHHHHHHTTCEEE-CHHHHHH--TCSEEEECSCHHHHHHHHHH
T ss_pred EC-chHHHHHHHHHHHHCcCE----EEEEECCh--HHHHHHHHHCCCEEc-cHHHHHh--cCCEEEEeCCcHHHHHHHHH
Confidence 56 467888888899888876 55566653 22 1366666 7877765 7999999999999988887
Q ss_pred HHHH-cCCcEEEEEcCCC
Q psy3769 397 EAIE-SELELVICITEGI 413 (974)
Q Consensus 397 e~~~-~gv~~~vi~s~G~ 413 (974)
+... ..-..+++..+|+
T Consensus 92 ~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 92 EIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp HTGGGCCTTCEEEESCCH
T ss_pred HHHhhCCCCCEEEEcCCc
Confidence 5543 2233455555554
No 237
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=61.56 E-value=5.2 Score=45.33 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=64.5
Q ss_pred ecCCCCCHHHHHHHHHHHhhcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEec--CCCCCccccccccccch
Q psy3769 293 DIGGGATIKTITEAFKIMMQQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVN--PKKNGQKFEEIPIFDTV 370 (974)
Q Consensus 293 d~GG~a~~~~v~~a~~~il~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVn--P~~~g~~i~G~~~y~sl 370 (974)
+-+.+- .+.+.+.++.+ +.+.+++ |+|. +..|..+++.+.+.||+ .+..+. |...|..+.|+|+|..
T Consensus 33 ~~~~gy-~~~l~~~i~~i--~~~~~v~---IiGA-G~~G~~l~~~l~~~g~~---ivgfiDdd~~~~g~~i~GipV~~~- 101 (409)
T 2py6_A 33 DPMFGI-PANVREVIARR--GNATRLV---ILGT-KGFGAHLMNVRHERPCE---VIAAVDDFRYHSGELYYGLPIIST- 101 (409)
T ss_dssp CTTTTS-CHHHHHHHHHH--GGGCEEE---EECS-SSTHHHHHSCSSSCSSE---EEEEECTTTTTSCCEETTEEEECH-
T ss_pred CCCCCh-HHHHHHHHHHh--CCCCeEE---EEeC-CHHHHHHHHHHHHCCCE---EEEEEeCCcccccCEECCEEEECH-
Confidence 334555 56777888888 3334444 4673 45677777777676777 565554 5544678999999975
Q ss_pred hhhcc--cCCCcEEEEEecchhHHHHHHHHHHcCCcE
Q psy3769 371 KNAKN--ETGATVSVIYVPAIFATSAIWEAIESELEL 405 (974)
Q Consensus 371 ~dip~--~~~vDlavi~vp~~~v~~~v~e~~~~gv~~ 405 (974)
+++++ ...++.+++++ . ...++++.|.+.|++.
T Consensus 102 ~~l~~~~~~~~~~viiai-~-~r~~i~~~l~~~g~~~ 136 (409)
T 2py6_A 102 DRFTELATHDRDLVALNT-C-RYDGPKRFFDQICRTH 136 (409)
T ss_dssp HHHHHHHHTCTTEEEEEC-C-CSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEec-c-HHHHHHHHHHhcCCCE
Confidence 55543 34678888887 2 3356777776666554
No 238
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=61.25 E-value=4.8 Score=44.42 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=34.9
Q ss_pred chhhhcc-cCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCC
Q psy3769 369 TVKNAKN-ETGATVSVIYVPAIFATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 369 sl~dip~-~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G 412 (974)
+.+++|- ...+|+++.++|.....+....++++|+|. |++|+.
T Consensus 81 d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~-V~iSap 124 (335)
T 1u8f_O 81 DPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKR-VIISAP 124 (335)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSE-EEESSC
T ss_pred CHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeE-EEeccC
Confidence 5677751 137999999999999999999999999997 666754
No 239
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=59.75 E-value=14 Score=40.57 Aligned_cols=129 Identities=13% Similarity=0.005 Sum_probs=74.6
Q ss_pred chhhhcccCCCcEEEEEecchh----HHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccccc
Q psy3769 369 TVKNAKNETGATVSVIYVPAIF----ATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGLIV 444 (974)
Q Consensus 369 sl~dip~~~~vDlavi~vp~~~----v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~~~ 444 (974)
+..++-...++|+++.++|+.. ..+.+.+|+++|.. ++.-..+.-.+...+|.+.|+ ++|.++.=.-+.|--.
T Consensus 73 d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkh-VVtaNK~~la~~~~eL~~lA~--~~g~~~~~Ea~vg~gi 149 (325)
T 3ing_A 73 SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMN-VVTANKSGLANKWHDIMDSAN--QNSKYIRYEATVAGGV 149 (325)
T ss_dssp CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCE-EEECCCHHHHHHHHHHHHHHH--HHTCCEECGGGSSTTS
T ss_pred CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCe-EEEcCchhHHHHHHHHHHHHH--HcCCeEEEEeeecccC
Confidence 5556554457999999999753 25889999999965 344333221234568899999 8898876544444333
Q ss_pred cCcc-ccccCCCCCCCCCCEEEEe--CChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCcc
Q psy3769 445 PEEI-KIGIMPGNIHKKGRIGVVS--RSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTD 517 (974)
Q Consensus 445 ~~~~-~~~~~~~~~~~~G~va~vS--QSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~ 517 (974)
|--. +.-. ...+.|.-|. -||+..+ +++.. +.|..|+.+ +..++-+-|...||.-.
T Consensus 150 Pii~~l~~~-----l~g~~I~~i~Gi~nGT~ny-il~~m-~~g~~f~~~----------l~~Aq~~GyaE~DP~~D 208 (325)
T 3ing_A 150 PLFSVLDYS-----ILPSKVKRFRGIVSSTINY-VIRNM-ANGRSLRDV----------VDDAIKKGIAESNPQDD 208 (325)
T ss_dssp CCHHHHHHT-----CTTCCEEEEEEECCHHHHH-HHHHH-HTTCCHHHH----------HHHHHHHTCSCSSTHHH
T ss_pred HHHHHHHHH-----hhCCCeeEEEEEEEeeeeE-Eeecc-cCCCCHHHH----------HHHHHHcCCCCCCcccc
Confidence 4321 1111 2235666664 6888654 44433 455544332 22334445666688764
No 240
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=59.71 E-value=1.4 Score=47.89 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCCCCceeeCCHH------------HHHH-HHHHcCCCcEEEEe
Q psy3769 6 YQGKEILRKFNVTIPKGILCMNVD------------EAIK-AAKKIGGNSWVIKA 47 (974)
Q Consensus 6 ~~ak~lL~~~GIpvp~~~~~~s~e------------ea~~-~a~~ig~~PvVvK~ 47 (974)
..+.++|+++|||||++.++.... ++.+ ..+.++ +|+|.||
T Consensus 99 ~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~-kPfVeKP 152 (330)
T 3t7a_A 99 REVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQ-KPFVEKP 152 (330)
T ss_dssp HHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEE-SSEEEEE
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccchhhhhcccccc-CCeeEcc
Confidence 457899999999999999987522 1111 234567 8999999
No 241
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=58.69 E-value=7.7 Score=42.83 Aligned_cols=46 Identities=13% Similarity=0.026 Sum_probs=34.8
Q ss_pred ccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCC
Q psy3769 365 PIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGI 413 (974)
Q Consensus 365 ~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~ 413 (974)
++..+++++.+ .+|+++.++|.....+..+.+.++|++. +..++.+
T Consensus 66 ~v~~~~e~l~~--~vDvV~~aTp~~~s~~~a~~~~~aG~kv-V~~sa~~ 111 (340)
T 1b7g_O 66 PVAGTVEDLIK--TSDIVVDTTPNGVGAQYKPIYLQLQRNA-IFQGGEK 111 (340)
T ss_dssp CCCCCHHHHHH--HCSEEEECCSTTHHHHHHHHHHHTTCEE-EECTTSC
T ss_pred ccccCHhHhhc--CCCEEEECCCCchhHHHHHHHHHcCCeE-EEeCCCC
Confidence 33344455533 6999999999999999999999999984 6666553
No 242
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=58.60 E-value=4.9 Score=43.65 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=60.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHHH-HHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW-EAIE 400 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~-e~~~ 400 (974)
|+| .|..|..+.+.+...|++ |+..+|... +. |...+.+++++.. ..|++++++|.. .+...+. +..+
T Consensus 129 IIG-~G~IG~~~A~~l~~~G~~----V~~~dr~~~-~~--~~~~~~~l~ell~--~aDvV~l~~P~~~~t~~~i~~~~l~ 198 (303)
T 1qp8_A 129 VLG-LGEIGTRVGKILAALGAQ----VRGFSRTPK-EG--PWRFTNSLEEALR--EARAAVCALPLNKHTRGLVKYQHLA 198 (303)
T ss_dssp EES-CSTHHHHHHHHHHHTTCE----EEEECSSCC-CS--SSCCBSCSHHHHT--TCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred EEc-cCHHHHHHHHHHHHCCCE----EEEECCCcc-cc--CcccCCCHHHHHh--hCCEEEEeCcCchHHHHHhCHHHHh
Confidence 345 367888889999888875 777887752 22 4455678888876 799999999986 3444443 2222
Q ss_pred -cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCc
Q psy3769 401 -SELELVICITEGIPVRDMLILKNKMKKNNSKT 432 (974)
Q Consensus 401 -~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi 432 (974)
..-.++++-.+--+-.++.+|.+..+ +..+
T Consensus 199 ~mk~gailin~srg~~vd~~aL~~aL~--~g~i 229 (303)
T 1qp8_A 199 LMAEDAVFVNVGRAEVLDRDGVLRILK--ERPQ 229 (303)
T ss_dssp TSCTTCEEEECSCGGGBCHHHHHHHHH--HCTT
T ss_pred hCCCCCEEEECCCCcccCHHHHHHHHH--hCCc
Confidence 23334344333222233455666666 4443
No 243
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=58.41 E-value=6 Score=43.54 Aligned_cols=59 Identities=10% Similarity=0.072 Sum_probs=42.4
Q ss_pred ccccchhhhcccCCCcEEEEEecch-hHHHHHHHHHHcCCcEEEEEcCC-CChHHHHHHHHHHhcCCC
Q psy3769 365 PIFDTVKNAKNETGATVSVIYVPAI-FATSAIWEAIESELELVICITEG-IPVRDMLILKNKMKKNNS 430 (974)
Q Consensus 365 ~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~e~~~~gv~~~vi~s~G-~~e~~~~~l~~~a~~~~~ 430 (974)
..|.|++++. .+|++++++|.. ...+.+++|+++|.. +++-... ++ ++..+|.+.|+ ++
T Consensus 56 ~~~~d~~~ll---~iDvVve~t~~~~~a~~~~~~AL~aGKh-VVtaNkkpla-~~~~eL~~~A~--~~ 116 (332)
T 2ejw_A 56 LLRAEPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIP-LITANKALLA-EAWESLRPFAE--EG 116 (332)
T ss_dssp GEESSCCCCT---TCSEEEECCCCSHHHHHHHHHHHHTTCC-EEECCHHHHH-HSHHHHHHHHH--TT
T ss_pred cccCCHHHHh---CCCEEEECCCCcHHHHHHHHHHHHcCCe-EEECCchhHH-HHHHHHHHHHH--hC
Confidence 4677888775 699999999976 567899999999955 4442221 22 23467899999 66
No 244
>3izc_j 60S ribosomal protein RPL33 (L35AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_j 3u5e_f 3u5i_f 4b6a_f
Probab=57.79 E-value=5.2 Score=36.34 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=25.3
Q ss_pred eCCEEEEEecCCCCHHHHHhhcCCEEE-EeCC
Q psy3769 898 HGNYVLANLYGITDRNLATKLQGYYLK-ISIN 928 (974)
Q Consensus 898 ~~~~~lvkf~gi~~re~Ae~L~g~~l~-v~~~ 928 (974)
+.+..|+|+||++|+|+|+-+.|..+. |.+.
T Consensus 24 ~~~taLlKIeGV~~~~~a~fylGKrvayvyka 55 (107)
T 3izc_j 24 NPNVSLIKIEGVATPQDAQFYLGKRIAYVYRA 55 (107)
T ss_dssp CCCEEEEEESSCSTTHHHHTTCCCCCCCCCCC
T ss_pred CCCeEEEEEcCcCCHHHHHhhcCCEEEEEEec
Confidence 356789999999999999999998654 4443
No 245
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=57.72 E-value=4 Score=45.18 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=50.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---c----------------cccccccchhhhcccCCCcEEE
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---F----------------EEIPIFDTVKNAKNETGATVSV 383 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i----------------~G~~~y~sl~dip~~~~vDlav 383 (974)
|+| .|.+|..+...|.+.|++ |+.+++.. +. + .++.+..+++++.+ ..|+++
T Consensus 20 iIG-~G~mG~~la~~L~~~G~~----V~~~~r~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~aDvVi 90 (366)
T 1evy_A 20 VFG-SGAFGTALAMVLSKKCRE----VCVWHMNE--EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN--GAEIIL 90 (366)
T ss_dssp EEC-CSHHHHHHHHHHTTTEEE----EEEECSCH--HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT--TCSSEE
T ss_pred EEC-CCHHHHHHHHHHHhCCCE----EEEEECCH--HHHHHHHHcCcccccccccccccceeeeCCHHHHHc--CCCEEE
Confidence 355 245666666666666654 55555432 11 0 13455567777654 789999
Q ss_pred EEecchhHHHHHHH----HHH---c-CCcEEEEEcCCCCh
Q psy3769 384 IYVPAIFATSAIWE----AIE---S-ELELVICITEGIPV 415 (974)
Q Consensus 384 i~vp~~~v~~~v~e----~~~---~-gv~~~vi~s~G~~e 415 (974)
+++|+..+.+++++ ... . +. .++.++.|+..
T Consensus 91 lav~~~~~~~v~~~~~~gl~~~l~~~~~-ivv~~~~gi~~ 129 (366)
T 1evy_A 91 FVIPTQFLRGFFEKSGGNLIAYAKEKQV-PVLVCTKGIER 129 (366)
T ss_dssp ECCCHHHHHHHHHHHCHHHHHHHHHHTC-CEEECCCSCCT
T ss_pred ECCChHHHHHHHHHhHHHHHHhcCccCC-EEEEECCcCCC
Confidence 99999888888877 432 2 32 24555667654
No 246
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=56.82 E-value=15 Score=40.98 Aligned_cols=89 Identities=11% Similarity=0.107 Sum_probs=58.0
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEe-cCCCCCcccc--ccccccchhhhc-c-cCCCcEEEEEecchhHHHHHH
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGV-NPKKNGQKFE--EIPIFDTVKNAK-N-ETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pV-nP~~~g~~i~--G~~~y~sl~dip-~-~~~vDlavi~vp~~~v~~~v~ 396 (974)
.|+|.||..|..+++.|.+++|..- .+..+ .++..|+.+. |.. ..+.++. + -..+|+++.++|.....+.+.
T Consensus 6 aIvGATG~vG~eLlrlL~~~~~p~~-el~~~as~~saG~~~~~~~~~--~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a~ 82 (366)
T 3pwk_A 6 AVVGATGAVGAQMIKMLEESTLPID-KIRYLASARSAGKSLKFKDQD--ITIEETTETAFEGVDIALFSAGSSTSAKYAP 82 (366)
T ss_dssp EEETTTSHHHHHHHHHHHTCCCCEE-EEEEEECTTTTTCEEEETTEE--EEEEECCTTTTTTCSEEEECSCHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHhcCCCCcE-EEEEEEccccCCCcceecCCC--ceEeeCCHHHhcCCCEEEECCChHhHHHHHH
Confidence 3579999999999988888766521 33333 4444343332 110 1111111 0 126899999999999999999
Q ss_pred HHHHcCCcEEEEEcCCCC
Q psy3769 397 EAIESELELVICITEGIP 414 (974)
Q Consensus 397 e~~~~gv~~~vi~s~G~~ 414 (974)
.+.++|++ +|-+|+-|.
T Consensus 83 ~~~~~G~~-vIDlSa~~R 99 (366)
T 3pwk_A 83 YAVKAGVV-VVDNTSYFR 99 (366)
T ss_dssp HHHHTTCE-EEECSSTTT
T ss_pred HHHHCCCE-EEEcCCccc
Confidence 99999997 577777663
No 247
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=56.41 E-value=5.5 Score=44.36 Aligned_cols=55 Identities=7% Similarity=0.050 Sum_probs=37.5
Q ss_pred CcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCC-CC--hHHHHHHHHHHhcCCCCceEEcc
Q psy3769 379 ATVSVIYVPAIFATSAIWEAIESELELVICITEG-IP--VRDMLILKNKMKKNNSKTLLLGP 437 (974)
Q Consensus 379 vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G-~~--e~~~~~l~~~a~~~~~gi~viGP 437 (974)
+|++++|+|.....+...+|+++|. ++++.... ++ .++..+|. .|+ ++|.++.=.
T Consensus 85 ~DvVV~~t~~~~~a~~~~~AL~aGk-hVVtaNkkpla~~~~~~~eL~-~A~--~~gv~~~~E 142 (358)
T 1ebf_A 85 PVILVDNTSSAYIAGFYTKFVENGI-SIATPNKKAFSSDLATWKALF-SNK--PTNGFVYHE 142 (358)
T ss_dssp CEEEEECSCCHHHHTTHHHHHHTTC-EEECCCCGGGSSCHHHHHHHT-CCC--TTCCCEECG
T ss_pred CcEEEEcCCChHHHHHHHHHHHCCC-eEEecCcccccCCHHHHHHHH-HHH--HcCCEEEEc
Confidence 3899999998766666679999994 44443332 33 13446788 898 888776533
No 248
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=56.20 E-value=11 Score=41.02 Aligned_cols=62 Identities=18% Similarity=0.316 Sum_probs=54.8
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCC-HHHHHHHHHHHhhcCCeEEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGAT-IKTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~-~~~v~~a~~~il~~~~~~~i~v 321 (974)
..|+||++.-.++++...+|.+...|---..|.-+|+.+. .-.+.+.++.+..||++++|++
T Consensus 151 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l 213 (305)
T 2fp4_A 151 KKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIIL 213 (305)
T ss_dssp CEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEE
T ss_pred CCCCEEEEecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEE
Confidence 3699999999999999999999999988999999999973 3457788999999999999853
No 249
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=56.18 E-value=14 Score=40.64 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=56.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecC-CCCCcc--ccccc-cccch--hhhcccCCCcEEEEEecchhHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNP-KKNGQK--FEEIP-IFDTV--KNAKNETGATVSVIYVPAIFATSAIW 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP-~~~g~~--i~G~~-~y~sl--~dip~~~~vDlavi~vp~~~v~~~v~ 396 (974)
|.|.+|..|..+++.|.+.+++.. .+..++. +..|+. +.|.. .+.+. ++. . .+|+++.++|.....+.+.
T Consensus 11 IiGAtG~iG~~llr~L~~~~~~~~-elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~-~--~~DvV~~a~g~~~s~~~a~ 86 (340)
T 2hjs_A 11 VVGATGSVGEALVGLLDERDFPLH-RLHLLASAESAGQRMGFAESSLRVGDVDSFDF-S--SVGLAFFAAAAEVSRAHAE 86 (340)
T ss_dssp EETTTSHHHHHHHHHHHHTTCCCS-CEEEEECTTTTTCEEEETTEEEECEEGGGCCG-G--GCSEEEECSCHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHhCCCCcE-EEEEEecCCCCCCccccCCcceEEecCCHHHh-c--CCCEEEEcCCcHHHHHHHH
Confidence 468888999999998885554321 3555553 222222 12211 11111 121 2 6899999999999999999
Q ss_pred HHHHcCCcEEEEEcCCCC
Q psy3769 397 EAIESELELVICITEGIP 414 (974)
Q Consensus 397 e~~~~gv~~~vi~s~G~~ 414 (974)
.+.++|++ +|.+|+-|.
T Consensus 87 ~~~~aG~k-vId~Sa~~r 103 (340)
T 2hjs_A 87 RARAAGCS-VIDLSGALE 103 (340)
T ss_dssp HHHHTTCE-EEETTCTTT
T ss_pred HHHHCCCE-EEEeCCCCC
Confidence 99999998 577777665
No 250
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=56.01 E-value=13 Score=38.74 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=47.9
Q ss_pred CCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh-
Q psy3769 461 GRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK- 539 (974)
Q Consensus 461 G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~- 539 (974)
.+|++|.-+|.+...-- ..+ .. |...+.--++.+.++.+.+||++|+|++.+++-|..-.....+.++
T Consensus 3 ~~iavi~i~G~I~~~~~----~~~-----~~--~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l 71 (240)
T 3rst_A 3 SKIAVLEVSGTIQDNGD----SSS-----LL--GADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKL 71 (240)
T ss_dssp CEEEEEEEESCBCCC--------------------CCCCHHHHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHH
T ss_pred CeEEEEEEEEEEcCCCC----cCc-----cc--ccCCcCHHHHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHH
Confidence 56888888888753210 001 11 1121011235566777788999999999999765443333333222
Q ss_pred ----c-CCCCEEEEecccC
Q psy3769 540 ----N-MKKPVIGFIAGIT 553 (974)
Q Consensus 540 ----~-~~KPVv~lk~Grs 553 (974)
. .+||||+.-.|..
T Consensus 72 ~~~~~~~~kPVia~v~g~a 90 (240)
T 3rst_A 72 EEIKKETKKPIYVSMGSMA 90 (240)
T ss_dssp HHHHHHHCCCEEEEEEEEE
T ss_pred HHHHHhCCCeEEEEECCee
Confidence 2 5899999877764
No 251
>3iz5_j 60S ribosomal protein L35A (L35AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_j
Probab=55.33 E-value=7 Score=35.69 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=27.2
Q ss_pred eCCEEEEEecCCCCHHHHHhhcCCEE-EEeCCCC
Q psy3769 898 HGNYVLANLYGITDRNLATKLQGYYL-KISINDF 930 (974)
Q Consensus 898 ~~~~~lvkf~gi~~re~Ae~L~g~~l-~v~~~~l 930 (974)
+.+..|+|+||++|+|+|+-+.|..+ |+.+..-
T Consensus 28 ~~~taLlKIeGV~~~~~a~fylGKrvayvykak~ 61 (111)
T 3iz5_j 28 YENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKT 61 (111)
T ss_dssp CCCEEEEEESSCSTTHHHHTTSCCCCEECCCCCS
T ss_pred CCCeEEEEEcCcCCHHHHHhhcCcEEEEEEeccc
Confidence 35688999999999999999999976 5666543
No 252
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=55.27 E-value=9.4 Score=42.21 Aligned_cols=105 Identities=15% Similarity=0.074 Sum_probs=62.0
Q ss_pred cccccCcccccchhhhh-ccCCCCceEEEEecCCCCCccc---cccccccchhhhcccCCCcEEEEEecchh-HHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCL-NYGNGKKAFVAGVNPKKNGQKF---EEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAIW- 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~-~~g~~g~~~V~pVnP~~~g~~i---~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v~- 396 (974)
|+| .|..|..+.+.+. ..|++ |+.++|.....+. .|.....+++++.. ..|++++++|... +...+.
T Consensus 168 IIG-~G~IG~~vA~~l~~~~G~~----V~~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvVil~vp~~~~t~~li~~ 240 (348)
T 2w2k_A 168 AVG-LGAIQKEIARKAVHGLGMK----LVYYDVAPADAETEKALGAERVDSLEELAR--RSDCVSVSVPYMKLTHHLIDE 240 (348)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCCE----EEEECSSCCCHHHHHHHTCEECSSHHHHHH--HCSEEEECCCCSGGGTTCBCH
T ss_pred EEE-ECHHHHHHHHHHHHhcCCE----EEEECCCCcchhhHhhcCcEEeCCHHHHhc--cCCEEEEeCCCChHHHHHhhH
Confidence 355 3678888889998 88875 7777776411111 26655558888765 7899999999853 443331
Q ss_pred HHH-HcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 397 EAI-ESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 397 e~~-~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
+.. ...-..+++-.+.-+..++++|.+..+ +..+.-.|
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~--~~~i~gag 279 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALK--SGKLLSAG 279 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEE
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHH--hCCceEEE
Confidence 222 234445444443333334455667777 55444333
No 253
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=55.23 E-value=5 Score=44.47 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=63.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~ 398 (974)
|+| .|..|..+.+.+...|++ |+..+|+.... .-.|...+.+++++.. ..|++++++|.. .+..++ ++.
T Consensus 173 IIG-~G~IG~~vA~~l~~~G~~----V~~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~ 245 (347)
T 1mx3_A 173 IIG-LGRVGQAVALRAKAFGFN----VLFYDPYLSDGVERALGLQRVSTLQDLLF--HSDCVTLHCGLNEHNHHLINDFT 245 (347)
T ss_dssp EEC-CSHHHHHHHHHHHTTTCE----EEEECTTSCTTHHHHHTCEECSSHHHHHH--HCSEEEECCCCCTTCTTSBSHHH
T ss_pred EEe-ECHHHHHHHHHHHHCCCE----EEEECCCcchhhHhhcCCeecCCHHHHHh--cCCEEEEcCCCCHHHHHHhHHHH
Confidence 355 357888899999988876 66778764111 1236655668988876 789999999974 344444 333
Q ss_pred HH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 399 IE-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 399 ~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
.+ ..-.++++-.+--+..++++|.+..+ +.++.
T Consensus 246 l~~mk~gailIN~arg~~vd~~aL~~aL~--~g~i~ 279 (347)
T 1mx3_A 246 VKQMRQGAFLVNTARGGLVDEKALAQALK--EGRIR 279 (347)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHH--HTSEE
T ss_pred HhcCCCCCEEEECCCChHHhHHHHHHHHH--hCCCc
Confidence 33 23344444333223334556777777 66665
No 254
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=55.13 E-value=8.2 Score=43.67 Aligned_cols=97 Identities=13% Similarity=0.043 Sum_probs=60.3
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHH-H-HHHHcCCc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-W-EAIESELE 404 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~-e~~~~gv~ 404 (974)
|..|..+.+.+...|++ |+..+|.. .....+...+.|++++-. ..|++++++|.. .+...+ + ......-.
T Consensus 154 G~IG~~vA~~l~~~G~~----V~~~d~~~-~~~~~~~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~l~~mk~g 226 (404)
T 1sc6_A 154 GHIGTQLGILAESLGMY----VYFYDIEN-KLPLGNATQVQHLSDLLN--MSDVVSLHVPENPSTKNMMGAKEISLMKPG 226 (404)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSC-CCCCTTCEECSCHHHHHH--HCSEEEECCCSSTTTTTCBCHHHHHHSCTT
T ss_pred CHHHHHHHHHHHHCCCE----EEEEcCCc-hhccCCceecCCHHHHHh--cCCEEEEccCCChHHHHHhhHHHHhhcCCC
Confidence 56788888999888876 77888865 122234556679999876 789999999985 333333 2 22233444
Q ss_pred EEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 405 LVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 405 ~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
++++-.+--.-.+++.|.+..+ +..+.
T Consensus 227 a~lIN~aRg~~vd~~aL~~aL~--~g~i~ 253 (404)
T 1sc6_A 227 SLLINASRGTVVDIPALADALA--SKHLA 253 (404)
T ss_dssp EEEEECSCSSSBCHHHHHHHHH--TTSEE
T ss_pred eEEEECCCChHHhHHHHHHHHH--cCCcc
Confidence 5444443222234456677777 55443
No 255
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=55.11 E-value=4.6 Score=42.12 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=48.3
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc--------------------ccccccccchhhhcccCCCcEEE
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK--------------------FEEIPIFDTVKNAKNETGATVSV 383 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~--------------------i~G~~~y~sl~dip~~~~vDlav 383 (974)
+| .+.+|..+.++|.+.|++ |+..+++. +. -.|...+.+..++.+ ..|+++
T Consensus 25 IG-~G~mG~alA~~L~~~G~~----V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~aDvVi 95 (245)
T 3dtt_A 25 LG-TGTVGRTMAGALADLGHE----VTIGTRDP--KATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA--GAELVV 95 (245)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEEESCH--HHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH--HCSEEE
T ss_pred EC-CCHHHHHHHHHHHHCCCE----EEEEeCCh--hhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh--cCCEEE
Confidence 56 567888888999988876 55556553 21 124455677777765 689999
Q ss_pred EEecchhHHHHHHHH
Q psy3769 384 IYVPAIFATSAIWEA 398 (974)
Q Consensus 384 i~vp~~~v~~~v~e~ 398 (974)
+++|+....+++++.
T Consensus 96 lavp~~~~~~~~~~i 110 (245)
T 3dtt_A 96 NATEGASSIAALTAA 110 (245)
T ss_dssp ECSCGGGHHHHHHHH
T ss_pred EccCcHHHHHHHHHh
Confidence 999999999888776
No 256
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=54.81 E-value=13 Score=37.22 Aligned_cols=83 Identities=13% Similarity=0.108 Sum_probs=53.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-Cccccc-------ccc-ccchhhhcccCCCcEEEEEecch----
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQKFEE-------IPI-FDTVKNAKNETGATVSVIYVPAI---- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~i~G-------~~~-y~sl~dip~~~~vDlavi~vp~~---- 389 (974)
|.|.++..|..+.+.|++.|++ |+.+..+.. .....+ +.- ..++.++.+ .+|.++-+....
T Consensus 5 ItGatG~iG~~l~~~L~~~g~~----V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 5 IVGSTGRVGKSLLKSLSTTDYQ----IYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGKSL 78 (219)
T ss_dssp EESTTSHHHHHHHHHHTTSSCE----EEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTSSC
T ss_pred EECCCCHHHHHHHHHHHHCCCE----EEEEECCccchhhcCCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCCCc
Confidence 5788888999999999988876 444433210 011112 222 334445544 799888776543
Q ss_pred ------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 ------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 ------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+..+++.|.+.|++.+|.+|+
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 2567888888889998887775
No 257
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=53.83 E-value=5 Score=43.54 Aligned_cols=83 Identities=16% Similarity=0.191 Sum_probs=47.8
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecC--CCC-Cccc--c------c-----ccccc--chhhhcccCCCcEEEEE
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNP--KKN-GQKF--E------E-----IPIFD--TVKNAKNETGATVSVIY 385 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP--~~~-g~~i--~------G-----~~~y~--sl~dip~~~~vDlavi~ 385 (974)
+| .|..|..+...|.+.|++ |+.+++ +.. -+.+ . | +.+.. +++++.+ ..|+++++
T Consensus 6 iG-~G~mG~~~a~~L~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~D~vi~~ 78 (335)
T 1txg_A 6 LG-AGAMGSALSVPLVDNGNE----VRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE--NAEVVLLG 78 (335)
T ss_dssp ES-CCHHHHHHHHHHHHHCCE----EEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT--TCSEEEEC
T ss_pred EC-cCHHHHHHHHHHHhCCCe----EEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHh--cCCEEEEc
Confidence 45 245666666666666654 555555 210 0000 0 1 13444 6666544 78999999
Q ss_pred ecchhHHHHHHHHHHcCCcE-EEEEcCCC
Q psy3769 386 VPAIFATSAIWEAIESELEL-VICITEGI 413 (974)
Q Consensus 386 vp~~~v~~~v~e~~~~gv~~-~vi~s~G~ 413 (974)
+|+..+.+++++.....-+. ++.++.|+
T Consensus 79 v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 79 VSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp SCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred CChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 99999999888765411123 34444577
No 258
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=53.37 E-value=12 Score=40.26 Aligned_cols=62 Identities=18% Similarity=0.340 Sum_probs=54.4
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCCH-HHHHHHHHHHhhcCCeEEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGATI-KTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~~-~~v~~a~~~il~~~~~~~i~v 321 (974)
..|+||++.-.++|+.+.+|.+...|---..|.-+|+.+.. -...+.++.+..||++++|++
T Consensus 149 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l 211 (294)
T 2yv1_A 149 KEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVM 211 (294)
T ss_dssp CEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEE
Confidence 36999999999999999999999999888999999999842 346778999999999999853
No 259
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=53.29 E-value=12 Score=40.29 Aligned_cols=62 Identities=13% Similarity=0.288 Sum_probs=54.5
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCC-HHHHHHHHHHHhhcCCeEEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGAT-IKTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~-~~~v~~a~~~il~~~~~~~i~v 321 (974)
..|+||++.-.++|+.+.+|.+...|---..|.-+|+.+. .-...+.++.+..||++++|++
T Consensus 143 ~~G~va~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l 205 (288)
T 1oi7_A 143 KRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVL 205 (288)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEE
Confidence 3699999999999999999999999988999999999984 2356778999999999999853
No 260
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.28 E-value=13 Score=37.31 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=46.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc----cc-------cccccchhhhcccCCCcEEEEEecch--
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF----EE-------IPIFDTVKNAKNETGATVSVIYVPAI-- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i----~G-------~~~y~sl~dip~~~~vDlavi~vp~~-- 389 (974)
|.|.++..|..+.+.|++.|++ |+.+..+. ... .+ +.-..++.++.+ .+|.++-+....
T Consensus 9 ItGatG~iG~~l~~~L~~~g~~----V~~~~r~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 9 LIGASGFVGSALLNEALNRGFE----VTAVVRHP--EKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGWN 80 (227)
T ss_dssp EETCCHHHHHHHHHHHHTTTCE----EEEECSCG--GGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC---
T ss_pred EEcCCchHHHHHHHHHHHCCCE----EEEEEcCc--ccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCCC
Confidence 5788888999999999998875 55554432 111 11 112223334433 567666554332
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 ----------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 ----------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+..+++.|.+.|++.+|.+|+
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 2344556666666666555554
No 261
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=52.37 E-value=17 Score=40.17 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=54.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEec--CCCCCccc---ccc-------------ccc-cchhhhcccCCCcEEE
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVN--PKKNGQKF---EEI-------------PIF-DTVKNAKNETGATVSV 383 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVn--P~~~g~~i---~G~-------------~~y-~sl~dip~~~~vDlav 383 (974)
|.|.+|..|..+++.|.+++.- .|..++ +...|+.+ .+. .+- .+.+++.+ ..+|+++
T Consensus 13 IiGAtG~iG~~llr~L~~~p~~---ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvV~ 88 (354)
T 1ys4_A 13 VLGATGSVGQRFVQLLADHPMF---ELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-EDVDIVF 88 (354)
T ss_dssp EETTTSHHHHHHHHHHTTCSSE---EEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-TTCCEEE
T ss_pred EECcCCHHHHHHHHHHhcCCCC---EEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-CCCCEEE
Confidence 5788888899988888766522 465564 33323332 110 010 12233211 1699999
Q ss_pred EEecchhHHHHHHHHHHcCCcEEEEEcCCC
Q psy3769 384 IYVPAIFATSAIWEAIESELELVICITEGI 413 (974)
Q Consensus 384 i~vp~~~v~~~v~e~~~~gv~~~vi~s~G~ 413 (974)
+++|.....+.+..+.++|++ +|=.++-|
T Consensus 89 ~atp~~~~~~~a~~~~~aG~~-VId~s~~~ 117 (354)
T 1ys4_A 89 SALPSDLAKKFEPEFAKEGKL-IFSNASAY 117 (354)
T ss_dssp ECCCHHHHHHHHHHHHHTTCE-EEECCSTT
T ss_pred ECCCchHHHHHHHHHHHCCCE-EEECCchh
Confidence 999999999999999999988 44444433
No 262
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=51.76 E-value=11 Score=41.30 Aligned_cols=100 Identities=18% Similarity=0.156 Sum_probs=59.8
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHHH-HcCCc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEAI-ESELE 404 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~~-~~gv~ 404 (974)
|..|..+.+.+...|++ |+.++|... ......-.|.+++++.. ..|++++++|... +...+ ++.. ...-.
T Consensus 154 G~IG~~~A~~l~~~G~~----V~~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~P~~~~t~~li~~~~l~~mk~g 226 (333)
T 1dxy_A 154 GHIGQVAIKLFKGFGAK----VIAYDPYPM-KGDHPDFDYVSLEDLFK--QSDVIDLHVPGIEQNTHIINEAAFNLMKPG 226 (333)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSCC-SSCCTTCEECCHHHHHH--HCSEEEECCCCCGGGTTSBCHHHHHHSCTT
T ss_pred CHHHHHHHHHHHHCCCE----EEEECCCcc-hhhHhccccCCHHHHHh--cCCEEEEcCCCchhHHHHhCHHHHhhCCCC
Confidence 56888889999888876 777777641 11222234668888876 7899999999743 22222 1222 23334
Q ss_pred EEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 405 LVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 405 ~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
++++-.+--+-.+++.|.+..+ +.++.=.|
T Consensus 227 a~lIn~srg~~vd~~aL~~aL~--~g~i~gA~ 256 (333)
T 1dxy_A 227 AIVINTARPNLIDTQAMLSNLK--SGKLAGVG 256 (333)
T ss_dssp EEEEECSCTTSBCHHHHHHHHH--TTSEEEEE
T ss_pred cEEEECCCCcccCHHHHHHHHH--hCCccEEE
Confidence 4444443222334566778787 66655443
No 263
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=51.54 E-value=9.8 Score=38.22 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=54.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------cc-------cccccchhhhcccCCCcEEEEEecch
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------EE-------IPIFDTVKNAKNETGATVSVIYVPAI 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------~G-------~~~y~sl~dip~~~~vDlavi~vp~~ 389 (974)
|+|..+..|..+.+.+.+.|++ |+.++++. +.. .| +. +.+++++.+ ..|++++++|+.
T Consensus 5 iiGa~G~~G~~ia~~l~~~g~~----V~~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~D~Vi~~~~~~ 75 (212)
T 1jay_A 5 LLGGTGNLGKGLALRLATLGHE----IVVGSRRE--EKAEAKAAEYRRIAGDASIT-GMKNEDAAE--ACDIAVLTIPWE 75 (212)
T ss_dssp EETTTSHHHHHHHHHHHTTTCE----EEEEESSH--HHHHHHHHHHHHHHSSCCEE-EEEHHHHHH--HCSEEEECSCHH
T ss_pred EEcCCCHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHHhccccccCCCC-hhhHHHHHh--cCCEEEEeCChh
Confidence 4576678888888888888875 55565542 111 12 33 356666654 689999999999
Q ss_pred hHHHHHHHHHH--cCCcEEEEEcCCCC
Q psy3769 390 FATSAIWEAIE--SELELVICITEGIP 414 (974)
Q Consensus 390 ~v~~~v~e~~~--~gv~~~vi~s~G~~ 414 (974)
.+.+++++..+ .+ +.++-++.|+.
T Consensus 76 ~~~~~~~~l~~~~~~-~~vi~~~~g~~ 101 (212)
T 1jay_A 76 HAIDTARDLKNILRE-KIVVSPLVPVS 101 (212)
T ss_dssp HHHHHHHHTHHHHTT-SEEEECCCCEE
T ss_pred hHHHHHHHHHHHcCC-CEEEEcCCCcC
Confidence 98888876543 23 34455566765
No 264
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=51.51 E-value=16 Score=41.61 Aligned_cols=61 Identities=11% Similarity=-0.035 Sum_probs=35.9
Q ss_pred cccccchhhhcccCCCcEEEEEecchh----------HHHHHHHHHHc-CC---cEEEEEcCCCC-hHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIF----------ATSAIWEAIES-EL---ELVICITEGIP-VRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~----------v~~~v~e~~~~-gv---~~~vi~s~G~~-e~~~~~l~~~a~ 426 (974)
+.+..+++++.. ..|++++++|... +.+++++..+. .- ..+|+..+..+ ....+++.+..+
T Consensus 64 l~~t~~~~~~~~--~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~ 139 (436)
T 1mv8_A 64 LSGTTDFKKAVL--DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIE 139 (436)
T ss_dssp EEEESCHHHHHH--TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHH
T ss_pred eEEeCCHHHHhc--cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHH
Confidence 555667776554 7899999998755 78887776542 22 34455544443 331333444443
No 265
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=50.97 E-value=12 Score=41.77 Aligned_cols=62 Identities=16% Similarity=0.349 Sum_probs=46.9
Q ss_pred ccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 367 FDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 367 y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+.+++++.+ .+|+++.++|.....+++++|++.|+.. +-++. .++ +..++.+.|+ ++|+.++
T Consensus 68 ~~~l~~ll~--~~DvVIn~~P~~~~~~v~~a~l~~G~~~-vD~s~-~~~-~~~~l~~~Ak--~aG~~~l 129 (365)
T 2z2v_A 68 FDKLVEVMK--EFELVIGALPGFLGFKSIKAAIKSKVDM-VDVSF-MPE-NPLELRDEAE--KAQVTIV 129 (365)
T ss_dssp HHHHHHHHT--TCSCEEECCCHHHHHHHHHHHHHTTCCE-EECCC-CSS-CGGGGHHHHH--HTTCEEE
T ss_pred HHHHHHHHh--CCCEEEECCChhhhHHHHHHHHHhCCeE-EEccC-CcH-HHHHHHHHHH--HcCCEEE
Confidence 456777765 7999999999988888999999999874 44443 222 2345678888 8899887
No 266
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=50.11 E-value=23 Score=35.84 Aligned_cols=70 Identities=20% Similarity=0.189 Sum_probs=49.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHH-c
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIE-S 401 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~-~ 401 (974)
|+| .+..|..+.+.+.+.|++ |+.++++. + .+ + ..|++++++|+..+.+++++... .
T Consensus 24 iiG-~G~mG~~la~~l~~~g~~----V~~~~~~~--~------------~~-~--~aD~vi~av~~~~~~~v~~~l~~~~ 81 (209)
T 2raf_A 24 IFG-KGNMGQAIGHNFEIAGHE----VTYYGSKD--Q------------AT-T--LGEIVIMAVPYPALAALAKQYATQL 81 (209)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECTTC--C------------CS-S--CCSEEEECSCHHHHHHHHHHTHHHH
T ss_pred EEC-CCHHHHHHHHHHHHCCCE----EEEEcCCH--H------------Hh-c--cCCEEEEcCCcHHHHHHHHHHHHhc
Confidence 467 577888888888888865 77777764 2 22 2 68999999999888888887653 2
Q ss_pred CCcEEEEEcCCCC
Q psy3769 402 ELELVICITEGIP 414 (974)
Q Consensus 402 gv~~~vi~s~G~~ 414 (974)
.=+.++-++.|++
T Consensus 82 ~~~~vi~~~~g~~ 94 (209)
T 2raf_A 82 KGKIVVDITNPLN 94 (209)
T ss_dssp TTSEEEECCCCBC
T ss_pred CCCEEEEECCCCC
Confidence 3123344567775
No 267
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=50.08 E-value=21 Score=39.31 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=56.9
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEec-CCCCCccccccc-cccchhhhc-c-cCCCcEEEEEecchhHHHHHHH
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGVN-PKKNGQKFEEIP-IFDTVKNAK-N-ETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVn-P~~~g~~i~G~~-~y~sl~dip-~-~~~vDlavi~vp~~~v~~~v~e 397 (974)
.|.|.|+-.|..+++.|.++.|..- .+..+. ++..|+.+. .. .--.+.++. + -..+|+++.++|.....+.+..
T Consensus 5 aIvGatG~vG~el~~lL~~h~fp~~-el~~~~s~~~aG~~~~-~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a~~ 82 (344)
T 3tz6_A 5 GIVGATGQVGQVMRTLLDERDFPAS-AVRFFASARSQGRKLA-FRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPR 82 (344)
T ss_dssp EEETTTSHHHHHHHHHHHHTTCCEE-EEEEEECTTTSSCEEE-ETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHhCCCCce-EEEEEECcccCCCcee-ecCCceEEEeCCHHHhccCCEEEECCChHHHHHHHHH
Confidence 4578888889888887777766521 344443 444344332 10 001111111 0 1268999999999999999999
Q ss_pred HHHcCCcEEEEEcCCC
Q psy3769 398 AIESELELVICITEGI 413 (974)
Q Consensus 398 ~~~~gv~~~vi~s~G~ 413 (974)
+.++|++ +|-.|+.|
T Consensus 83 ~~~~G~~-vID~Sa~~ 97 (344)
T 3tz6_A 83 FAAAGVT-VIDNSSAW 97 (344)
T ss_dssp HHHTTCE-EEECSSTT
T ss_pred HHhCCCE-EEECCCcc
Confidence 9999997 56667655
No 268
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=49.87 E-value=15 Score=40.36 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=35.3
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCC
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G 412 (974)
++++-.+.+++.. .+|+++.++|.....+....+.++|.+ ++..++.
T Consensus 65 ~l~v~~~~~~~~~--~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~ 111 (337)
T 1cf2_P 65 GIEVAGTVDDMLD--EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGE 111 (337)
T ss_dssp TCCCCEEHHHHHH--TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTS
T ss_pred ceEEcCCHHHHhc--CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCC
Confidence 3444446666655 799999999999999999999999977 4444443
No 269
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=49.62 E-value=15 Score=40.56 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=32.0
Q ss_pred CCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 378 GATVSVIYVPAIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 378 ~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
.+|+++.++|.....+......++|+|. |++|+.+.
T Consensus 91 gvDiV~eatg~~~s~e~a~~~l~~Gak~-V~iSap~r 126 (337)
T 1rm4_O 91 GIDLVIEGTGVFVDRDGAGKHLQAGAKK-VLITAPGK 126 (337)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSE-EEESSCCB
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCEE-EEECCccc
Confidence 6999999999999999999999999996 77887765
No 270
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=49.30 E-value=17 Score=38.04 Aligned_cols=83 Identities=22% Similarity=0.221 Sum_probs=52.0
Q ss_pred cccccCcccccchhhhhcc-CCCCceEEEEe-cCCCCCccc--cccc-------cccchhhhcccCCCcEEEEEecc---
Q psy3769 323 IFGITGKTGRFHTNLCLNY-GNGKKAFVAGV-NPKKNGQKF--EEIP-------IFDTVKNAKNETGATVSVIYVPA--- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~-g~~g~~~V~pV-nP~~~g~~i--~G~~-------~y~sl~dip~~~~vDlavi~vp~--- 388 (974)
|.|.++..|..+++.|.+. |++ ++..+ +|.. .... .|+. -..++.++.+ .+|.++.+.+.
T Consensus 5 VtGatG~iG~~l~~~L~~~~g~~---V~~~~R~~~~-~~~~~~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~ 78 (289)
T 3e48_A 5 LTGATGHLGTHITNQAIANHIDH---FHIGVRNVEK-VPDDWRGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIHP 78 (289)
T ss_dssp EETTTSHHHHHHHHHHHHTTCTT---EEEEESSGGG-SCGGGBTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCS
T ss_pred EEcCCchHHHHHHHHHhhCCCCc---EEEEECCHHH-HHHhhhCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCcc
Confidence 4788888999999998876 777 23332 2221 0111 1222 2234445544 78988877653
Q ss_pred -----hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 -----IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 -----~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.....+++.|.+.|++.+|.+|+
T Consensus 79 ~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 79 SFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred chhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 34567788888899998777775
No 271
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=49.25 E-value=11 Score=42.16 Aligned_cols=57 Identities=18% Similarity=0.094 Sum_probs=38.7
Q ss_pred hhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHH---HHHHHHHHhcCCCCceEE
Q psy3769 372 NAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRD---MLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 372 dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~---~~~l~~~a~~~~~gi~vi 435 (974)
++... ++|+++.+++...-.....+|+++| |.+++ .. .|.. -.++.+.|+ ++|+.++
T Consensus 88 el~~~-~iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl-AN--KE~lv~~G~~l~~~A~--~~gv~li 147 (388)
T 1r0k_A 88 EAAMM-GADWTMAAIIGCAGLKATLAAIRKG-KTVAL-AN--KESLVSAGGLMIDAVR--EHGTTLL 147 (388)
T ss_dssp HHHTS-CCSEEEECCCSGGGHHHHHHHHHTT-SEEEE-CC--SHHHHTTHHHHHHHHH--HHTCEEE
T ss_pred HHHcC-CCCEEEEeCCCHHHHHHHHHHHHCC-CEEEE-eC--cHHHHhhHHHHHHHHH--HcCCEEE
Confidence 34433 3899999998766667778899999 55443 21 1221 246778899 8898884
No 272
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=49.06 E-value=14 Score=39.85 Aligned_cols=62 Identities=16% Similarity=0.324 Sum_probs=54.2
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCCH-HHHHHHHHHHhhcCCeEEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGATI-KTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~~-~~v~~a~~~il~~~~~~~i~v 321 (974)
..|+||++.-.++|+.+.+|.+...|---..|.-+|+.+.. -...+.++.+..||++++|++
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l 212 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVL 212 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEE
Confidence 36999999999999999999999999888999999999842 346778999999999999853
No 273
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=49.03 E-value=9.9 Score=42.84 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=59.9
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCcc---ccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHHHH-c
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---FEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEAIE-S 401 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~~~-~ 401 (974)
|..|..+.+.+..+|++ |+..++.....+ -.|...+.+++++.. ..|++++++|.. .+...+ ++..+ .
T Consensus 200 G~IG~~vA~~l~a~G~~----V~~~d~~~~~~~~~~~~G~~~~~~l~ell~--~aDvV~l~~Plt~~t~~li~~~~l~~m 273 (393)
T 2nac_A 200 GRIGLAVLRRLAPFDVH----LHYTDRHRLPESVEKELNLTWHATREDMYP--VCDVVTLNCPLHPETEHMINDETLKLF 273 (393)
T ss_dssp SHHHHHHHHHHGGGTCE----EEEECSSCCCHHHHHHHTCEECSSHHHHGG--GCSEEEECSCCCTTTTTCBSHHHHTTS
T ss_pred CHHHHHHHHHHHhCCCE----EEEEcCCccchhhHhhcCceecCCHHHHHh--cCCEEEEecCCchHHHHHhhHHHHhhC
Confidence 56888889999988876 777777641122 237666778999876 799999999953 334444 23332 2
Q ss_pred CCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 402 ELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 402 gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
.-.++++-.+--+-.+++.|.+..+ +..+.
T Consensus 274 k~gailIN~aRG~~vde~aL~~aL~--~g~i~ 303 (393)
T 2nac_A 274 KRGAYIVNTARGKLCDRDAVARALE--SGRLA 303 (393)
T ss_dssp CTTEEEEECSCGGGBCHHHHHHHHH--TTSEE
T ss_pred CCCCEEEECCCchHhhHHHHHHHHH--cCCee
Confidence 3344333333222234556777777 55444
No 274
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=48.96 E-value=13 Score=40.99 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=60.8
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc-ccccccccchhhhcccCCCcEEEEEecc-hhHHHHH-HHH-H
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK-FEEIPIFDTVKNAKNETGATVSVIYVPA-IFATSAI-WEA-I 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~-i~G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v-~e~-~ 399 (974)
+| .|..|..+.+.+..+|++ |...+|.....+ -.|...+.+++++-+ ..|++++++|. +.+...+ ++. .
T Consensus 179 IG-lG~IG~~vA~~l~~~G~~----V~~~dr~~~~~~~~~g~~~~~~l~ell~--~sDvV~l~~Plt~~T~~li~~~~l~ 251 (345)
T 4g2n_A 179 FG-MGRIGRAIATRARGFGLA----IHYHNRTRLSHALEEGAIYHDTLDSLLG--ASDIFLIAAPGRPELKGFLDHDRIA 251 (345)
T ss_dssp ES-CSHHHHHHHHHHHTTTCE----EEEECSSCCCHHHHTTCEECSSHHHHHH--TCSEEEECSCCCGGGTTCBCHHHHH
T ss_pred EE-eChhHHHHHHHHHHCCCE----EEEECCCCcchhhhcCCeEeCCHHHHHh--hCCEEEEecCCCHHHHHHhCHHHHh
Confidence 44 356888899999988876 777888641111 226655579999977 79999999995 3333333 222 2
Q ss_pred HcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 400 ESELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 400 ~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
...-.+++|-.+--+-.+++.|.+..+ +..+.
T Consensus 252 ~mk~gailIN~aRG~~vde~aL~~aL~--~g~i~ 283 (345)
T 4g2n_A 252 KIPEGAVVINISRGDLINDDALIEALR--SKHLF 283 (345)
T ss_dssp HSCTTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hCCCCcEEEECCCCchhCHHHHHHHHH--hCCce
Confidence 334445444333222234555666666 55444
No 275
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=48.92 E-value=18 Score=39.70 Aligned_cols=83 Identities=16% Similarity=0.063 Sum_probs=62.9
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCC--CCHHHHHHHHHHHhhcCCeEEEEEc--cccccCcccccch
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGG--ATIKTITEAFKIMMQQNNLKTILVN--IFGITGKTGRFHT 335 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~--a~~~~v~~a~~~il~~~~~~~i~vn--i~G~~~k~G~~v~ 335 (974)
..|+||++.-.++|+...+|.+...|---..|.-+||. +.. .+.+.++.+..||++++|++= +-|... ...+
T Consensus 167 ~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~-~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e---~~~~ 242 (334)
T 3mwd_B 167 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGS-TFMDHVLRYQDTPGVKMIVVLGEIGGTEE---YKIC 242 (334)
T ss_dssp SCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSS-CHHHHHHHHHTCTTCCEEEEEEESSSSHH---HHHH
T ss_pred CCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCC-CHHHHHHHHhcCCCCCEEEEEEecCChHH---HHHH
Confidence 47999999999999999999999999888889999998 553 467889999999999998653 333221 3344
Q ss_pred hhhhccCCCCc
Q psy3769 336 NLCLNYGNGKK 346 (974)
Q Consensus 336 ~~l~~~g~~g~ 346 (974)
+.+.+...+.|
T Consensus 243 ~~~r~~~~~KP 253 (334)
T 3mwd_B 243 RGIKEGRLTKP 253 (334)
T ss_dssp HHHHTTSCCSC
T ss_pred HHHHhhcCCCC
Confidence 55554334444
No 276
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=48.06 E-value=25 Score=37.88 Aligned_cols=87 Identities=9% Similarity=0.017 Sum_probs=51.7
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---c------cc-------cccccchhhhcccCCCcEEEEEe
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---F------EE-------IPIFDTVKNAKNETGATVSVIYV 386 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i------~G-------~~~y~sl~dip~~~~vDlavi~v 386 (974)
|.|.++..|..+++.|++.|++- .|+.++....... + .+ +.-..++.++.+...+|.++-+.
T Consensus 29 VtGatG~iG~~l~~~L~~~g~~~--~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A 106 (346)
T 4egb_A 29 VTGGAGFIGSNFVHYMLQSYETY--KIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFA 106 (346)
T ss_dssp EETTTSHHHHHHHHHHHHHCTTE--EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEECC
T ss_pred EECCccHHHHHHHHHHHhhCCCc--EEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEECC
Confidence 57888899999999999988543 4665543210011 1 11 11222344444312488877654
Q ss_pred cch------------------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 387 PAI------------------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 387 p~~------------------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
... .+..+++.|.+.|++.+|.+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 107 AESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp CCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred cccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 311 1356788888889998777775
No 277
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=47.69 E-value=26 Score=40.06 Aligned_cols=61 Identities=13% Similarity=0.189 Sum_probs=39.9
Q ss_pred cccccchhhhcccCCCcEEEEEecch----------hHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAI----------FATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~----------~v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+.+..+++++.+ ..|++++++|.. .+.+++++..+. .-..+|+..+..+....+++.+..+
T Consensus 66 l~~t~d~~ea~~--~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~ 137 (450)
T 3gg2_A 66 LRFGTEIEQAVP--EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQ 137 (450)
T ss_dssp EEEESCHHHHGG--GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEECCHHHHHh--cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHH
Confidence 455667777554 689999999887 788888877663 3345666666665433344444443
No 278
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=47.61 E-value=3 Score=47.50 Aligned_cols=103 Identities=11% Similarity=0.162 Sum_probs=69.8
Q ss_pred cccccchhhhhccCCCCceEEEEecCCC---C-----CccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHH
Q psy3769 329 KTGRFHTNLCLNYGNGKKAFVAGVNPKK---N-----GQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIE 400 (974)
Q Consensus 329 k~G~~v~~~l~~~g~~g~~~V~pVnP~~---~-----g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~ 400 (974)
..|+....||++.|.+ ++++..|.. + ..+-.|..++ +++|+.. ..|++.+.+|.+.-+++.++ ++
T Consensus 47 sQG~AqAlNLRDSGv~---V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~--~ADvV~~L~PD~~q~~vy~~-I~ 119 (491)
T 3ulk_A 47 AQGLNQGLNMRDSGLD---ISYALRKEAIAEKRASWRKATENGFKVG-TYEELIP--QADLVINLTPDKQHSDVVRT-VQ 119 (491)
T ss_dssp HHHHHHHHHHHHTTCE---EEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGG--GCSEEEECSCGGGHHHHHHH-HG
T ss_pred hHhHHHHhHHHhcCCc---EEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHH--hCCEEEEeCChhhHHHHHHH-HH
Confidence 4677788899999998 788886431 0 1245688887 5777765 79999999999998888876 65
Q ss_pred c--CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccCCccc
Q psy3769 401 S--ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPNCPGL 442 (974)
Q Consensus 401 ~--gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPnc~G~ 442 (974)
. .-..++.++-||.-.... ...-. .-++-++-|.|+|-
T Consensus 120 p~lk~G~~L~faHGFnI~~~~--i~pp~--dvdVimVAPKgpG~ 159 (491)
T 3ulk_A 120 PLMKDGAALGYSHGFNIVEVG--EQIRK--DITVVMVAPKCPGT 159 (491)
T ss_dssp GGSCTTCEEEESSCHHHHTTC--CCCCT--TSEEEEEEESSCHH
T ss_pred hhCCCCCEEEecCcccccccc--cccCC--CcceEEeCCCCCcH
Confidence 4 345779999998643210 00011 23455667777763
No 279
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=46.38 E-value=7 Score=39.87 Aligned_cols=81 Identities=12% Similarity=0.112 Sum_probs=52.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----cccccccchhhhcccCCCcEEEEEecchhHHHHHH-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIW- 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~- 396 (974)
|+| .|..|..+.+.+.+.|++ |+.++++. +.. .|+... +++++.+ ..|++++++|+....++++
T Consensus 33 iiG-~G~~G~~la~~l~~~g~~----V~~~~r~~--~~~~~~~~~g~~~~-~~~~~~~--~~DvVi~av~~~~~~~v~~l 102 (215)
T 2vns_A 33 ILG-SGDFARSLATRLVGSGFK----VVVGSRNP--KRTARLFPSAAQVT-FQEEAVS--SPEVIFVAVFREHYSSLCSL 102 (215)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEEESSH--HHHHHHSBTTSEEE-EHHHHTT--SCSEEEECSCGGGSGGGGGG
T ss_pred EEc-cCHHHHHHHHHHHHCCCE----EEEEeCCH--HHHHHHHHcCCcee-cHHHHHh--CCCEEEECCChHHHHHHHHH
Confidence 457 678888888899888876 55566553 211 155554 6777655 7999999999877666553
Q ss_pred -HHHHcCCcEEEEEcCCCCh
Q psy3769 397 -EAIESELELVICITEGIPV 415 (974)
Q Consensus 397 -e~~~~gv~~~vi~s~G~~e 415 (974)
... .+ +.++-++.|.+.
T Consensus 103 ~~~~-~~-~~vv~~s~g~~~ 120 (215)
T 2vns_A 103 SDQL-AG-KILVDVSNPTEQ 120 (215)
T ss_dssp HHHH-TT-CEEEECCCCCHH
T ss_pred HHhc-CC-CEEEEeCCCccc
Confidence 222 33 334556677653
No 280
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=46.38 E-value=17 Score=38.93 Aligned_cols=62 Identities=13% Similarity=0.300 Sum_probs=53.6
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCCC-HHHHHHHHHHHhhcCCeEEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGAT-IKTITEAFKIMMQQNNLKTILV 321 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a~-~~~v~~a~~~il~~~~~~~i~v 321 (974)
..|+||++.--++++...+|.+...|---..|.-+||.+. .-...+.++.+..||++++|++
T Consensus 143 ~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l 205 (288)
T 2nu8_A 143 KPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVM 205 (288)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEE
Confidence 3699999999999999999999999888888999999874 2456788999999999999853
No 281
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=45.74 E-value=35 Score=36.01 Aligned_cols=82 Identities=9% Similarity=-0.008 Sum_probs=48.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-----Cccccccccccc----hhhhcccCCCcEEEEEecch----
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-----GQKFEEIPIFDT----VKNAKNETGATVSVIYVPAI---- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-----g~~i~G~~~y~s----l~dip~~~~vDlavi~vp~~---- 389 (974)
|.|.++..|..+.+.|++.|++ |+.+..+.. ...+......+. ..|+. .+|.++-+....
T Consensus 12 VtGatG~iG~~l~~~L~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~d~vi~~a~~~~~~~ 84 (321)
T 3vps_A 12 ITGGAGFIGGHLARALVASGEE----VTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---DVRLVYHLASHKSVPR 84 (321)
T ss_dssp EETTTSHHHHHHHHHHHHTTCC----EEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---TEEEEEECCCCCCHHH
T ss_pred EECCCChHHHHHHHHHHHCCCE----EEEEecCCcccccchhhhhhhccCCCeeEEeCccc---cCCEEEECCccCChHH
Confidence 5798899999999999999987 444433220 011111100111 12332 577766554211
Q ss_pred -------------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 -------------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 -------------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+..+++.|.+.|++.+|.+|+
T Consensus 85 ~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 85 SFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 2355788888889998777775
No 282
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=45.70 E-value=9.7 Score=42.29 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=34.3
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHH----c-CCc-EEEEEcCCCCh
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIE----S-ELE-LVICITEGIPV 415 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~----~-gv~-~~vi~s~G~~e 415 (974)
++.+..+.+++.+ ..|++++++|+..+.+++++... . +-. .++.++.|+..
T Consensus 90 ~i~~~~~~~ea~~--~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 90 NIVAHSDLASVIN--DADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp TEEEESSTHHHHT--TCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred CeEEECCHHHHHc--CCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 3455667777654 78999999999999998887654 1 112 34455557653
No 283
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=45.10 E-value=16 Score=40.50 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=54.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCC-CCcccc-------cc----ccccchhhhcccCCCcEEEEEecchh
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKK-NGQKFE-------EI----PIFDTVKNAKNETGATVSVIYVPAIF 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~-~g~~i~-------G~----~~y~sl~dip~~~~vDlavi~vp~~~ 390 (974)
|.|.+|..|..+++.|.+++.- .+..++-.. .|..+. |. -.+.+ ++... .+|+++.++|...
T Consensus 21 IiGAtG~iG~~llr~L~~~p~~---elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~--~vDvVf~atp~~~ 94 (359)
T 1xyg_A 21 LLGASGYTGAEIVRLLANHPHF---QVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFS--TVDAVFCCLPHGT 94 (359)
T ss_dssp EECCSSHHHHHHHHHHHTCSSE---EEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGG--GCSEEEECCCTTT
T ss_pred EECcCCHHHHHHHHHHHcCCCc---EEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhc--CCCEEEEcCCchh
Confidence 5688888999999998876532 455665432 121111 11 00111 22222 6899999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 391 ATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 391 v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
..+.+..+ ++|++ +|-.|+.|.
T Consensus 95 s~~~a~~~-~aG~~-VId~sa~~R 116 (359)
T 1xyg_A 95 TQEIIKEL-PTALK-IVDLSADFR 116 (359)
T ss_dssp HHHHHHTS-CTTCE-EEECSSTTT
T ss_pred HHHHHHHH-hCCCE-EEECCcccc
Confidence 99999999 99987 567776664
No 284
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=44.88 E-value=20 Score=39.03 Aligned_cols=45 Identities=24% Similarity=0.233 Sum_probs=31.6
Q ss_pred cccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-CCcEEEEEcCC
Q psy3769 366 IFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES-ELELVICITEG 412 (974)
Q Consensus 366 ~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~-gv~~~vi~s~G 412 (974)
.+.+++++.+ +.|++++++|+....+++++.... .-+.+++...|
T Consensus 65 ~~~~~~~~~~--~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 65 LTSDIGLAVK--DADVILIVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp EESCHHHHHT--TCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred ecCCHHHHHh--cCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 5667777654 799999999999999888877542 22343444445
No 285
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=44.80 E-value=22 Score=39.98 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=35.4
Q ss_pred cccchhhhcccCCCcEEEEEecch-----------hHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 366 IFDTVKNAKNETGATVSVIYVPAI-----------FATSAIWEAIESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 366 ~y~sl~dip~~~~vDlavi~vp~~-----------~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+..+.++..+ ..|++++++|.. .+.+++++..+.+-..+|+..+..+....+++.+...
T Consensus 63 ~t~~~~~~~~--~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~ 132 (402)
T 1dlj_A 63 ATLDSKAAYK--EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQ 132 (402)
T ss_dssp EESCHHHHHH--HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTT
T ss_pred EeCCHHHHhc--CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhC
Confidence 3445555444 689999999987 5888887776644445566533333222344555444
No 286
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=44.67 E-value=32 Score=38.32 Aligned_cols=52 Identities=27% Similarity=0.350 Sum_probs=34.4
Q ss_pred EEEEeeeecCcccccC-eEEEeCCHHHHHHHHHHHHhccccccccCCCCCceeEEEEEEEec
Q psy3769 43 WVIKAQIHAGGRGKCG-GIKLAQSLEQVEKYTKKILGMQLITSQTNQEGENVFCVLIEEYID 103 (974)
Q Consensus 43 vVvK~qi~~ggrgk~G-GV~l~~s~ee~~~a~~~~l~~~~~t~q~~~~g~~~~~vLVee~v~ 103 (974)
|+||++- |--| ||..++|.+|+..--++-.++-. ..+.|.+++.|+|||-+.
T Consensus 280 V~VKADa-----GTYGMGImtV~s~~ev~~LNrK~RnKM~----~~Keg~~v~~VIIQEGV~ 332 (432)
T 3k1t_A 280 VIVKADA-----GTYGMGIMTVKSADDVRDLNRKQRNKMS----VVKEGLKVSEVILQEGVY 332 (432)
T ss_dssp EEEEEEC-----GGGCEEEEEESSGGGGSSCCHHHHHHHH----CSSSSSCCCEEEEEECCC
T ss_pred EEEEcCC-----CCCCceEEEecCHHHHHHHhHHhhhhhh----hccCCCccceEEEecCcc
Confidence 6899974 3334 89889999998652222111111 224688999999999765
No 287
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=44.62 E-value=10 Score=41.89 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=55.5
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHH--HHHHHcCCc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI--WEAIESELE 404 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v--~e~~~~gv~ 404 (974)
|..|..+.+.+..+|++ |...+|.. ..+..+.-.|.+++++-+ ..|++++++|.. .+...+ +......-.
T Consensus 157 G~IG~~vA~~l~~~G~~----V~~~d~~~-~~~~~~~~~~~~l~ell~--~aDvV~l~~Plt~~t~~li~~~~l~~mk~g 229 (343)
T 2yq5_A 157 GHIGSAVAEIFSAMGAK----VIAYDVAY-NPEFEPFLTYTDFDTVLK--EADIVSLHTPLFPSTENMIGEKQLKEMKKS 229 (343)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSC-CGGGTTTCEECCHHHHHH--HCSEEEECCCCCTTTTTCBCHHHHHHSCTT
T ss_pred CHHHHHHHHHHhhCCCE----EEEECCCh-hhhhhccccccCHHHHHh--cCCEEEEcCCCCHHHHHHhhHHHHhhCCCC
Confidence 56888888999988876 78888875 123333345669999876 789999999952 222222 122223444
Q ss_pred EEEEEcCCCChHHHHHHHHHHh
Q psy3769 405 LVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 405 ~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
++++-.+--+-.+++.|.+..+
T Consensus 230 ailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 230 AYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp CEEEECSCGGGBCHHHHHHHHH
T ss_pred cEEEECCCChhhhHHHHHHHHH
Confidence 4444333222234455666666
No 288
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=44.26 E-value=19 Score=41.12 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=58.7
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCC-Cccc----cccc-------cccchhhhcccCCCcEEEEEecchhH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQKF----EEIP-------IFDTVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~i----~G~~-------~y~sl~dip~~~~vDlavi~vp~~~v 391 (974)
+| ++..|..+.+.|.+.|++ |..++.... .+++ .+.. -+.++.++.+ .+|+++.++|....
T Consensus 9 iG-aG~iG~~ia~~L~~~G~~----V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~~~~~ 81 (450)
T 1ff9_A 9 LG-SGFVTRPTLDVLTDSGIK----VTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPYTFH 81 (450)
T ss_dssp EC-CSTTHHHHHHHHHTTTCE----EEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC--CH
T ss_pred EC-CCHHHHHHHHHHHhCcCE----EEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCccccc
Confidence 46 566777777777776654 444443310 0011 1111 1234445544 79999999998766
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 392 TSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 392 ~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
..+.++|.+.|.. ++.. .....+..++.+.|+ ++|++++
T Consensus 82 ~~i~~a~l~~g~~-vvd~--~~~~~~~~~l~~aA~--~aGv~~i 120 (450)
T 1ff9_A 82 ATVIKSAIRQKKH-VVTT--SYVSPAMMELDQAAK--DAGITVM 120 (450)
T ss_dssp HHHHHHHHHHTCE-EEES--SCCCHHHHHTHHHHH--HTTCEEE
T ss_pred hHHHHHHHhCCCe-EEEe--ecccHHHHHHHHHHH--HCCCeEE
Confidence 7778889888854 3332 232344567888899 8888755
No 289
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=44.05 E-value=8.7 Score=41.97 Aligned_cols=99 Identities=8% Similarity=0.093 Sum_probs=58.1
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecC-CCCCccc----cccccccchhhhcccCCCcEEEEEecch-hHHHHHH-
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNP-KKNGQKF----EEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW- 396 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP-~~~g~~i----~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~- 396 (974)
+| .|..|..+.+.+...|++ |+.++| .. +.. .|.....+++++.. ..|++++++|.. .+..++.
T Consensus 152 IG-~G~IG~~~A~~l~~~G~~----V~~~d~~~~--~~~~~~~~g~~~~~~l~ell~--~aDvVil~~p~~~~t~~~i~~ 222 (320)
T 1gdh_A 152 YG-FGSIGQALAKRAQGFDMD----IDYFDTHRA--SSSDEASYQATFHDSLDSLLS--VSQFFSLNAPSTPETRYFFNK 222 (320)
T ss_dssp EC-CSHHHHHHHHHHHTTTCE----EEEECSSCC--CHHHHHHHTCEECSSHHHHHH--HCSEEEECCCCCTTTTTCBSH
T ss_pred EC-cCHHHHHHHHHHHHCCCE----EEEECCCCc--ChhhhhhcCcEEcCCHHHHHh--hCCEEEEeccCchHHHhhcCH
Confidence 45 356888888899888865 788888 64 221 36654458888876 789999999964 2444442
Q ss_pred HHHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 397 EAIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 397 e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
+..+ ..-.++++-.+.-.-.++..|.+..+ +.++.
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~~aL~~aL~--~g~i~ 258 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDNELVVAALE--AGRLA 258 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHH--hCCCc
Confidence 2222 23344433333222223445566666 44443
No 290
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=44.02 E-value=23 Score=34.71 Aligned_cols=83 Identities=17% Similarity=0.175 Sum_probs=46.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCC-cc--ccc-------cccccchhhhcccCCCcEEEEEecch---
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QK--FEE-------IPIFDTVKNAKNETGATVSVIYVPAI--- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~--i~G-------~~~y~sl~dip~~~~vDlavi~vp~~--- 389 (974)
|.|.++..|..+.+.|++.|++ |+.+..+... .+ -.+ +.-..++.++.+ .+|.++.+....
T Consensus 8 VtGatG~iG~~l~~~l~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 8 IFGATGQTGLTTLAQAVQAGYE----VTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTRNDL 81 (206)
T ss_dssp EESTTSHHHHHHHHHHHHTTCE----EEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCTTCC
T ss_pred EEcCCcHHHHHHHHHHHHCCCe----EEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHc--CCCEEEECccCCCCC
Confidence 4788888999999999988875 5544333200 00 011 111223444433 577766665432
Q ss_pred --------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 --------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 --------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
....+++.|.+.+++.++.+|+
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 2455666666667776666654
No 291
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=43.99 E-value=12 Score=41.57 Aligned_cols=86 Identities=12% Similarity=0.117 Sum_probs=55.8
Q ss_pred cccccCcccccchhhhhccC-CC--CceEEEEecC-CCCCcccc-------cc---cccc-chhhhcccCCCcEEEEEec
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NG--KKAFVAGVNP-KKNGQKFE-------EI---PIFD-TVKNAKNETGATVSVIYVP 387 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~--g~~~V~pVnP-~~~g~~i~-------G~---~~y~-sl~dip~~~~vDlavi~vp 387 (974)
|+|.||..|..+++.|.+++ |. .- .+..++. +..|+.+. |. .+-. +.+++ . .+|+++.++|
T Consensus 14 IvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~-~--~~DvVf~alg 89 (352)
T 2nqt_A 14 VAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVL-G--GHDAVFLALP 89 (352)
T ss_dssp EETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHH-T--TCSEEEECCT
T ss_pred EECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECCCcCCCchhhhcccccccceeeeccCCHHHh-c--CCCEEEECCC
Confidence 57999999999999998876 21 10 3555542 22223221 11 1100 11122 1 6899999999
Q ss_pred chhHHHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 388 AIFATSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 388 ~~~v~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
.....+.+..+ ++|++ +|.+|+-|.
T Consensus 90 ~~~s~~~~~~~-~~G~~-vIDlSa~~R 114 (352)
T 2nqt_A 90 HGHSAVLAQQL-SPETL-IIDCGADFR 114 (352)
T ss_dssp TSCCHHHHHHS-CTTSE-EEECSSTTT
T ss_pred CcchHHHHHHH-hCCCE-EEEECCCcc
Confidence 99999999999 99987 678887775
No 292
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=43.97 E-value=12 Score=40.92 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=58.3
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCcccc---ccccccchhhhcccCCCcEEEEEecc-hhHHHHH-HHHHH-c
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFE---EIPIFDTVKNAKNETGATVSVIYVPA-IFATSAI-WEAIE-S 401 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~---G~~~y~sl~dip~~~~vDlavi~vp~-~~v~~~v-~e~~~-~ 401 (974)
|..|..+.+.+..+|++ |..+++.. +... ....+.+++++-+ ..|++++++|. +.+...+ ++..+ .
T Consensus 146 G~IG~~vA~~l~~~G~~----V~~~dr~~--~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPlt~~t~~li~~~~l~~m 217 (324)
T 3evt_A 146 GQIGQSLAAKASALGMH----VIGVNTTG--HPADHFHETVAFTATADALA--TANFIVNALPLTPTTHHLFSTELFQQT 217 (324)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEEESSC--CCCTTCSEEEEGGGCHHHHH--HCSEEEECCCCCGGGTTCBSHHHHHTC
T ss_pred CHHHHHHHHHHHhCCCE----EEEECCCc--chhHhHhhccccCCHHHHHh--hCCEEEEcCCCchHHHHhcCHHHHhcC
Confidence 56788889999988886 66677654 2222 2233568888876 78999999995 3344433 23333 2
Q ss_pred CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 402 ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 402 gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
.-.++++-.+--+-.+++.|.+..+ +..+.-.+
T Consensus 218 k~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~ 250 (324)
T 3evt_A 218 KQQPMLINIGRGPAVDTTALMTALD--HHQLSMAA 250 (324)
T ss_dssp CSCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEE
T ss_pred CCCCEEEEcCCChhhhHHHHHHHHH--hCCceEEE
Confidence 3334333333222234556777777 66554333
No 293
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=43.70 E-value=30 Score=37.94 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=56.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecC-CCCCccc--cccc-cccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNP-KKNGQKF--EEIP-IFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP-~~~g~~i--~G~~-~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|.|.+|..|..+++.|.+++|..- .+..++. +..|+.+ .|.. .+.+++.-+- ..+|+++.++|.....+.+..+
T Consensus 8 I~GAtG~iG~~llr~L~~~~~p~~-elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~-~~vDvVf~a~g~~~s~~~a~~~ 85 (336)
T 2r00_A 8 IFGATGAVGETMLEVLQEREFPVD-ELFLLASERSEGKTYRFNGKTVRVQNVEEFDW-SQVHIALFSAGGELSAKWAPIA 85 (336)
T ss_dssp EETTTSHHHHHHHHHHHHTTCCEE-EEEEEECTTTTTCEEEETTEEEEEEEGGGCCG-GGCSEEEECSCHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHhcCCCCCE-EEEEEECCCCCCCceeecCceeEEecCChHHh-cCCCEEEECCCchHHHHHHHHH
Confidence 578888899999998887755431 4566664 2222221 1211 1112211110 2689999999999999999999
Q ss_pred HHcCCcEEEEEcCCC
Q psy3769 399 IESELELVICITEGI 413 (974)
Q Consensus 399 ~~~gv~~~vi~s~G~ 413 (974)
.++|++ +|..|+-|
T Consensus 86 ~~~G~~-vId~s~~~ 99 (336)
T 2r00_A 86 AEAGVV-VIDNTSHF 99 (336)
T ss_dssp HHTTCE-EEECSSTT
T ss_pred HHcCCE-EEEcCCcc
Confidence 999986 46666655
No 294
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=43.53 E-value=30 Score=37.90 Aligned_cols=44 Identities=16% Similarity=0.105 Sum_probs=35.3
Q ss_pred chhhhcc-cCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCC
Q psy3769 369 TVKNAKN-ETGATVSVIYVPAIFATSAIWEAIESELELVICITEGI 413 (974)
Q Consensus 369 sl~dip~-~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~ 413 (974)
+.+++|- ...+|+++.++|.....+......++|+|. |++|+.+
T Consensus 78 dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~Gakv-VdlSa~~ 122 (330)
T 1gad_O 78 DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKK-VVMTGPS 122 (330)
T ss_dssp SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSE-EEESSCC
T ss_pred ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEE-EEECCCC
Confidence 3556541 127999999999999999999999999996 7888776
No 295
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=43.38 E-value=11 Score=42.24 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=83.1
Q ss_pred ecCcchhhHHHHHHHhcCCCCceeeecCCCCCHHHHH-HHHHHHhhc-----CCeEEEEEccccccCcccccchhhhhcc
Q psy3769 268 VNGAGLAMATMDTIKLFGGEPANFLDIGGGATIKTIT-EAFKIMMQQ-----NNLKTILVNIFGITGKTGRFHTNLCLNY 341 (974)
Q Consensus 268 ~nGaGlam~t~D~i~~~gg~panfld~GG~a~~~~v~-~a~~~il~~-----~~~~~i~vni~G~~~k~G~~v~~~l~~~ 341 (974)
..|+|.--.-+|.+...|=.-+| ..| .+.+.|. .++-.++.. .....-=|.|+| .|..|..+.+.+...
T Consensus 64 ~~~~G~D~iD~~~~~~~gI~v~n---~pg-~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIG-lG~IG~~vA~~l~~~ 138 (380)
T 2o4c_A 64 TCTIGTDHLDLDYFAEAGIAWSS---APG-CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVG-AGQVGGRLVEVLRGL 138 (380)
T ss_dssp ECSSCSTTBCHHHHHHHTCEEEC---CTT-TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEC-CSHHHHHHHHHHHHT
T ss_pred EcCcccchhhHHHHHhCCCEEEe---CCC-cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEe-CCHHHHHHHHHHHHC
Confidence 56777776667777777654444 223 2333332 233333321 111111122355 457888889999888
Q ss_pred CCCCceEEEEecCCCCCccc-cccccccchhhhcccCCCcEEEEEecchh-----HHHHH-HHHHH-cCCcEEEEEcCCC
Q psy3769 342 GNGKKAFVAGVNPKKNGQKF-EEIPIFDTVKNAKNETGATVSVIYVPAIF-----ATSAI-WEAIE-SELELVICITEGI 413 (974)
Q Consensus 342 g~~g~~~V~pVnP~~~g~~i-~G~~~y~sl~dip~~~~vDlavi~vp~~~-----v~~~v-~e~~~-~gv~~~vi~s~G~ 413 (974)
|++ |+..+|.. ... .|. .+.+++++.+ ..|++++++|... +...+ ++..+ ..-.++++-.+--
T Consensus 139 G~~----V~~~d~~~--~~~~~g~-~~~~l~ell~--~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG 209 (380)
T 2o4c_A 139 GWK----VLVCDPPR--QAREPDG-EFVSLERLLA--EADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRG 209 (380)
T ss_dssp TCE----EEEECHHH--HHHSTTS-CCCCHHHHHH--HCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCG
T ss_pred CCE----EEEEcCCh--hhhccCc-ccCCHHHHHH--hCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCC
Confidence 876 77777753 211 233 4678999876 7899999998644 22333 12222 3444544433322
Q ss_pred ChHHHHHHHHHHhcCCCCceEE
Q psy3769 414 PVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 414 ~e~~~~~l~~~a~~~~~gi~vi 435 (974)
+-.+++.|.+..+ +.++.-.
T Consensus 210 ~vvd~~aL~~aL~--~g~i~~A 229 (380)
T 2o4c_A 210 AVVDNQALRRLLE--GGADLEV 229 (380)
T ss_dssp GGBCHHHHHHHHH--TTCCEEE
T ss_pred cccCHHHHHHHHH--hCCCceE
Confidence 2234566777777 6655433
No 296
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=43.16 E-value=22 Score=40.35 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=59.9
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchh-HHHHH--HHHHHcCCc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI--WEAIESELE 404 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v--~e~~~~gv~ 404 (974)
|..|..+.+.+...|++ |+..+|.. .....+...+.|++++-+ ..|++++++|... +...+ +......-.
T Consensus 165 G~IG~~vA~~l~~~G~~----V~~yd~~~-~~~~~~~~~~~sl~ell~--~aDvV~lhvPlt~~T~~li~~~~l~~mk~g 237 (416)
T 3k5p_A 165 GNIGSQVGNLAESLGMT----VRYYDTSD-KLQYGNVKPAASLDELLK--TSDVVSLHVPSSKSTSKLITEAKLRKMKKG 237 (416)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECTTC-CCCBTTBEECSSHHHHHH--HCSEEEECCCC-----CCBCHHHHHHSCTT
T ss_pred CHHHHHHHHHHHHCCCE----EEEECCcc-hhcccCcEecCCHHHHHh--hCCEEEEeCCCCHHHhhhcCHHHHhhCCCC
Confidence 56788888899888876 77788764 123334556789999976 7999999999743 33333 222234444
Q ss_pred EEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 405 LVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 405 ~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
++++=.+--+-.+++.|.+..+ +..+.-.
T Consensus 238 ailIN~aRG~vvd~~aL~~aL~--~g~i~gA 266 (416)
T 3k5p_A 238 AFLINNARGSDVDLEALAKVLQ--EGHLAGA 266 (416)
T ss_dssp EEEEECSCTTSBCHHHHHHHHH--TTSEEEE
T ss_pred cEEEECCCChhhhHHHHHHHHH--cCCccEE
Confidence 5444433222234556677777 6655533
No 297
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=42.20 E-value=11 Score=40.96 Aligned_cols=101 Identities=15% Similarity=0.082 Sum_probs=59.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~ 398 (974)
|+| .|..|..+.+.+...|++ |+.++|..... .-.|.. +.+++++.. ..|++++++|... +..++ ++.
T Consensus 147 IIG-~G~IG~~~A~~l~~~G~~----V~~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvVvl~~P~~~~t~~li~~~~ 218 (313)
T 2ekl_A 147 IVG-FGRIGTKVGIIANAMGMK----VLAYDILDIREKAEKINAK-AVSLEELLK--NSDVISLHVTVSKDAKPIIDYPQ 218 (313)
T ss_dssp EES-CSHHHHHHHHHHHHTTCE----EEEECSSCCHHHHHHTTCE-ECCHHHHHH--HCSEEEECCCCCTTSCCSBCHHH
T ss_pred EEe-eCHHHHHHHHHHHHCCCE----EEEECCCcchhHHHhcCce-ecCHHHHHh--hCCEEEEeccCChHHHHhhCHHH
Confidence 345 356888888999988875 77788765111 123554 348888766 7899999999643 32222 222
Q ss_pred H-HcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 399 I-ESELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 399 ~-~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
. ...-.++++-.+--+-.++..|.+..+ +.++.
T Consensus 219 l~~mk~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 252 (313)
T 2ekl_A 219 FELMKDNVIIVNTSRAVAVNGKALLDYIK--KGKVY 252 (313)
T ss_dssp HHHSCTTEEEEESSCGGGBCHHHHHHHHH--TTCEE
T ss_pred HhcCCCCCEEEECCCCcccCHHHHHHHHH--cCCCc
Confidence 2 223344444333322234556777777 66553
No 298
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=41.82 E-value=18 Score=40.12 Aligned_cols=101 Identities=11% Similarity=0.116 Sum_probs=60.9
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---ccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---FEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEA 398 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~ 398 (974)
+| .|..|..+.+.+..+|++ |...+++....+ -.|...+.+++++-. ..|++++++|.. .+...+ ++.
T Consensus 170 IG-~G~IG~~vA~~l~~~G~~----V~~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~Plt~~t~~li~~~~ 242 (351)
T 3jtm_A 170 VG-AGRIGKLLLQRLKPFGCN----LLYHDRLQMAPELEKETGAKFVEDLNEMLP--KCDVIVINMPLTEKTRGMFNKEL 242 (351)
T ss_dssp EC-CSHHHHHHHHHHGGGCCE----EEEECSSCCCHHHHHHHCCEECSCHHHHGG--GCSEEEECSCCCTTTTTCBSHHH
T ss_pred EE-eCHHHHHHHHHHHHCCCE----EEEeCCCccCHHHHHhCCCeEcCCHHHHHh--cCCEEEECCCCCHHHHHhhcHHH
Confidence 44 356888899999988876 677776531111 236666779999976 799999999953 333332 222
Q ss_pred H-HcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 399 I-ESELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 399 ~-~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
. ...-.+++|-++--+-.+++.|.+..+ +..+.
T Consensus 243 l~~mk~gailIN~aRG~~vde~aL~~aL~--~g~i~ 276 (351)
T 3jtm_A 243 IGKLKKGVLIVNNARGAIMERQAVVDAVE--SGHIG 276 (351)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred HhcCCCCCEEEECcCchhhCHHHHHHHHH--hCCcc
Confidence 2 234445444443222234556667666 55555
No 299
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=41.64 E-value=48 Score=35.57 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=50.7
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc-c------------cc-------cccccchhhhcccCCCcEE
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK-F------------EE-------IPIFDTVKNAKNETGATVS 382 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~-i------------~G-------~~~y~sl~dip~~~~vDla 382 (974)
|.|.++..|..+++.|++.|++ ++..+.......+ . .+ +.-..++.++.+ .+|.+
T Consensus 30 VtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~V 104 (351)
T 3ruf_A 30 ITGVAGFIGSNLLEKLLKLNQV---VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDHV 104 (351)
T ss_dssp EETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred EECCCcHHHHHHHHHHHHCCCE---EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCEE
Confidence 4798899999999999998986 3333332210000 0 11 222234445544 78988
Q ss_pred EEEecch------------------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 383 VIYVPAI------------------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 383 vi~vp~~------------------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+-+.... .+..+++.|.+.|++.+|.+|+
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 7665321 1234678888889988777764
No 300
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=41.59 E-value=22 Score=40.97 Aligned_cols=60 Identities=12% Similarity=0.234 Sum_probs=42.4
Q ss_pred chhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 369 TVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 369 sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
++.++.. .+|++|.++|.....++.+.|.+.|+.. +..+ -+. ....++.+.|+ ++|++++
T Consensus 81 ~l~~~l~--~~DvVIn~tp~~~~~~v~~a~l~~g~~v-vd~~-~~~-p~~~~Ll~~Ak--~aGv~~i 140 (467)
T 2axq_A 81 ALDKVLA--DNDVVISLIPYTFHPNVVKSAIRTKTDV-VTSS-YIS-PALRELEPEIV--KAGITVM 140 (467)
T ss_dssp HHHHHHH--TSSEEEECSCGGGHHHHHHHHHHHTCEE-EECS-CCC-HHHHHHHHHHH--HHTCEEE
T ss_pred HHHHHHc--CCCEEEECCchhhhHHHHHHHHhcCCEE-EEee-cCC-HHHHHHHHHHH--HcCCEEE
Confidence 4555544 7999999999987778889999988664 3332 222 34466778888 8888765
No 301
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=41.45 E-value=28 Score=38.42 Aligned_cols=121 Identities=16% Similarity=0.130 Sum_probs=71.7
Q ss_pred ccccccchhhhcccCCCcEEEEEecc------hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPA------IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~------~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
|+|.+.|++++.+ ..+|.+++.+.+ +...+.+.+|+++|..- +-.-..+-.+..++.+.|+ + |..+..
T Consensus 59 gipi~~~l~~al~-~~~d~lvig~a~~gG~l~~~~~~~i~~Al~~G~~V--vsglh~~l~~~pel~~~A~--~-g~~i~d 132 (349)
T 2obn_A 59 YVPIVKSVEAALE-YKPQVLVIGIAPKGGGIPDDYWIELKTALQAGMSL--VNGLHTPLANIPDLNALLQ--P-GQLIWD 132 (349)
T ss_dssp CCCEESSHHHHGG-GCCSEEEECCCCCCC-SCGGGHHHHHHHHHTTCEE--EECSSSCCTTCHHHHHHCC--T-TCCEEE
T ss_pred CCCccCCHHHHHh-CCCCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcE--EeCccchhhCCHHHHHHHH--c-CCEEEE
Confidence 5999999999974 479999999721 35668999999999873 3333333334455788898 7 888875
Q ss_pred cCCccccccCccccccCCCC--CCCCCCEEEEeCChhh-----HHHHHHHHHHcCCceEEEeecCCC
Q psy3769 437 PNCPGLIVPEEIKIGIMPGN--IHKKGRIGVVSRSGTL-----TYEVVCQLTELGFGQSSAVGIGGD 496 (974)
Q Consensus 437 Pnc~G~~~~~~~~~~~~~~~--~~~~G~va~vSQSG~~-----~~~~~~~~~~~g~g~s~~vs~Gn~ 496 (974)
=.- +| ..+. .+... ..+.-.+.++.-.-++ +.++...++++|+-... +.+|..
T Consensus 133 vr~----pp-~~l~-~~~g~~~~v~~k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~-~~tgqt 192 (349)
T 2obn_A 133 VRK----EP-ANLD-VASGAARTLPCRRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKF-LATGQT 192 (349)
T ss_dssp TTC----CC-SSCC-CCCSGGGGCSSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEE-ECCSHH
T ss_pred ecc----Cc-cccc-ccccceeeecceEEEEcCCCccccceeHHHHHHHHHHhcCCcEEE-Eeccch
Confidence 221 11 1110 00100 0011124444443333 34566777788885554 556654
No 302
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=41.20 E-value=19 Score=40.48 Aligned_cols=66 Identities=6% Similarity=0.080 Sum_probs=44.8
Q ss_pred ccchhhhcccCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCC-------hHHHHHHHHHHhcCCCCceEE
Q psy3769 367 FDTVKNAKNETGATVSVIYVPAIFATSAIWEAIESELELVICITEGIP-------VRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 367 y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~-------e~~~~~l~~~a~~~~~gi~vi 435 (974)
..+++++.+...+|+++.+.|+....++++.|.+.|++. +-++.-.+ -..+.++.+.|+ ++|+.++
T Consensus 65 ~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~v-vD~a~~~~~~~~~~~~~~~~~l~~~a~--~aG~~~i 137 (405)
T 4ina_A 65 IEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPY-LDTANYEHPDLAKFEYKEQWAFHDRYK--EKGVMAL 137 (405)
T ss_dssp HHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCE-EESSCCBCTTCSCBCSHHHHTTHHHHH--HHTCEEE
T ss_pred HHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCE-EEecCCCCcccchhhhHHHHHHHHHHH--HhCCEEE
Confidence 455666654224899999999988889999999999985 33332211 122346778888 7887754
No 303
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=41.17 E-value=23 Score=39.13 Aligned_cols=85 Identities=20% Similarity=0.222 Sum_probs=54.1
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEecCC-CCCccccc--------ccccc-chhhhcccCCCcEEEEEecchhH
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPK-KNGQKFEE--------IPIFD-TVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~-~~g~~i~G--------~~~y~-sl~dip~~~~vDlavi~vp~~~v 391 (974)
.|.|.||-.|..+++.|.++..- .+..++.+ ..|+.+.. +++-+ +.+++.. .+|+++.+.|....
T Consensus 17 ~IvGAtG~vG~ellrlL~~hP~~---el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~--~~Dvvf~alp~~~s 91 (351)
T 1vkn_A 17 GIIGATGYTGLELVRLLKNHPEA---KITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSK--NCDVLFTALPAGAS 91 (351)
T ss_dssp EEESTTSHHHHHHHHHHHHCTTE---EEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHH--HCSEEEECCSTTHH
T ss_pred EEECCCCHHHHHHHHHHHcCCCc---EEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhc--CCCEEEECCCcHHH
Confidence 46788888888888888876543 56666553 22333321 11111 1222212 58999999999999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCC
Q psy3769 392 TSAIWEAIESELELVICITEGIP 414 (974)
Q Consensus 392 ~~~v~e~~~~gv~~~vi~s~G~~ 414 (974)
.+.+.++ +|++ +|=.|+.|.
T Consensus 92 ~~~~~~~--~g~~-VIDlSsdfR 111 (351)
T 1vkn_A 92 YDLVREL--KGVK-IIDLGADFR 111 (351)
T ss_dssp HHHHTTC--CSCE-EEESSSTTT
T ss_pred HHHHHHh--CCCE-EEECChhhh
Confidence 9998888 7877 455666664
No 304
>2ey4_C Small nucleolar RNP similar to GAR1; trimeric complex, structural genomics, PSI, protein structur initiative; 2.11A {Pyrococcus furiosus} SCOP: b.43.3.5 PDB: 3mqk_C 2rfk_C
Probab=40.78 E-value=33 Score=29.65 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=19.7
Q ss_pred cCeEEEecCCcEeEEEEEeecC
Q psy3769 945 IDCIVENIHGKLLGTVTEIIQN 966 (974)
Q Consensus 945 iG~~V~d~~g~~lG~V~~v~~~ 966 (974)
+|..|+|++.+.+|+|.||+=.
T Consensus 33 ~na~Vy~e~~~~IGkV~dIfGP 54 (82)
T 2ey4_C 33 LNDRVVDKRLQFVGIVKDVFGP 54 (82)
T ss_dssp TTCEEECTTCCCCEEEEEEEEE
T ss_pred CCCEeEcCCCCEeEEEEEEECC
Confidence 3899999999999999999854
No 305
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=40.62 E-value=49 Score=30.47 Aligned_cols=93 Identities=13% Similarity=0.060 Sum_probs=55.7
Q ss_pred cccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecc-------h-hHHHHHH
Q psy3769 325 GITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPA-------I-FATSAIW 396 (974)
Q Consensus 325 G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~-------~-~v~~~v~ 396 (974)
|.|.+....+.+.+.+.|++- .++.+... +.+++. ..|.+++..|- + .+.+.++
T Consensus 10 GnT~~iA~~ia~~l~~~g~~v--~~~~~~~~-------------~~~~l~---~~d~iiig~pty~~g~~p~~~~~~fl~ 71 (138)
T 5nul_A 10 GNTEKMAELIAKGIIESGKDV--NTINVSDV-------------NIDELL---NEDILILGCSAMTDEVLEESEFEPFIE 71 (138)
T ss_dssp SHHHHHHHHHHHHHHHTTCCC--EEEEGGGC-------------CHHHHT---TCSEEEEEECCBTTTBCCTTTHHHHHH
T ss_pred chHHHHHHHHHHHHHHCCCeE--EEEEhhhC-------------CHHHHh---hCCEEEEEcCccCCCCCChHHHHHHHH
Confidence 444455666666666667653 34444221 123553 46888888773 2 4566666
Q ss_pred HHHH--cCCcEEEEEcCCCC-hHHHHHHHHHHhcCCCCceEEcc
Q psy3769 397 EAIE--SELELVICITEGIP-VRDMLILKNKMKKNNSKTLLLGP 437 (974)
Q Consensus 397 e~~~--~gv~~~vi~s~G~~-e~~~~~l~~~a~~~~~gi~viGP 437 (974)
.... .|-+.+++-+.|.. .....++.+..+ +.|.+++|+
T Consensus 72 ~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~--~~G~~~v~~ 113 (138)
T 5nul_A 72 EISTKISGKKVALFGSYGWGDGKWMRDFEERMN--GYGCVVVET 113 (138)
T ss_dssp HHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHH--HTTCEECSC
T ss_pred HHHhhcCCCEEEEEEecCCCCChHHHHHHHHHH--HCCCEEECC
Confidence 6654 46666555555543 334566778888 889999986
No 306
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=40.49 E-value=42 Score=34.84 Aligned_cols=85 Identities=9% Similarity=0.040 Sum_probs=53.2
Q ss_pred ccccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc
Q psy3769 322 NIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES 401 (974)
Q Consensus 322 ni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~ 401 (974)
.|+| .|.+|..+.+.|.+.|++ |..++.. +++. ..| ++++|.+.+.+++++....
T Consensus 10 ~IIG-~G~~G~sLA~~L~~~G~~----V~~~~~~---------------~~~~---~aD--ilavP~~ai~~vl~~l~~~ 64 (232)
T 3dfu_A 10 GIFD-DGSSTVNMAEKLDSVGHY----VTVLHAP---------------EDIR---DFE--LVVIDAHGVEGYVEKLSAF 64 (232)
T ss_dssp EEEC-CSCCCSCHHHHHHHTTCE----EEECSSG---------------GGGG---GCS--EEEECSSCHHHHHHHHHTT
T ss_pred EEEe-eCHHHHHHHHHHHHCCCE----EEEecCH---------------HHhc---cCC--EEEEcHHHHHHHHHHHHHh
Confidence 3467 478888888999988875 6666542 3342 467 9999999999999888753
Q ss_pred -CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEc
Q psy3769 402 -ELELVICITEGIPVRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 402 -gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viG 436 (974)
.-..+++-.+|--..+ +.+.++ +.|.+++|
T Consensus 65 l~~g~ivvd~sgs~~~~---vl~~~~--~~g~~fvg 95 (232)
T 3dfu_A 65 ARRGQMFLHTSLTHGIT---VMDPLE--TSGGIVMS 95 (232)
T ss_dssp CCTTCEEEECCSSCCGG---GGHHHH--HTTCEEEE
T ss_pred cCCCCEEEEECCcCHHH---HHHHHH--hCCCcEEE
Confidence 2344455445532221 223333 45666554
No 307
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=39.79 E-value=12 Score=41.85 Aligned_cols=154 Identities=15% Similarity=0.082 Sum_probs=82.6
Q ss_pred ecCcchhhHHHHHHHhcCCCCceeeecCCCCCHHHHHH-HHHHHhhc-----CCeEEEEEccccccCcccccchhhhhcc
Q psy3769 268 VNGAGLAMATMDTIKLFGGEPANFLDIGGGATIKTITE-AFKIMMQQ-----NNLKTILVNIFGITGKTGRFHTNLCLNY 341 (974)
Q Consensus 268 ~nGaGlam~t~D~i~~~gg~panfld~GG~a~~~~v~~-a~~~il~~-----~~~~~i~vni~G~~~k~G~~v~~~l~~~ 341 (974)
..|+|.--.-.|.....|=.-+|--+ .+.+.|.+ ++-.++.- .....-=|.|+| .|..|..+.+.+...
T Consensus 67 ~~~~G~D~iD~~~~~~~gI~v~n~pg----~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIG-lG~IG~~vA~~l~a~ 141 (381)
T 3oet_A 67 TATAGTDHVDEAWLKQAGIGFSAAPG----CNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVG-VGNVGSRLQTRLEAL 141 (381)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCTT----TTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEC-CSHHHHHHHHHHHHT
T ss_pred EccccccccCHHHHHhCCEEEEECCC----cCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEe-ECHHHHHHHHHHHHC
Confidence 55677666666666666644444222 22333332 33333221 011100112345 357888899999988
Q ss_pred CCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecchh-----HHHHH--HHHHHcCCcEEEEEcCCCC
Q psy3769 342 GNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIF-----ATSAI--WEAIESELELVICITEGIP 414 (974)
Q Consensus 342 g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-----v~~~v--~e~~~~gv~~~vi~s~G~~ 414 (974)
|++ |...+|.. +...+...+.+++++-+ ..|++++++|... +...+ +......-.+++|=++--+
T Consensus 142 G~~----V~~~d~~~--~~~~~~~~~~sl~ell~--~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 142 GIR----TLLCDPPR--AARGDEGDFRTLDELVQ--EADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp TCE----EEEECHHH--HHTTCCSCBCCHHHHHH--HCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred CCE----EEEECCCh--HHhccCcccCCHHHHHh--hCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 886 77778753 22223346789999876 7899999999432 22222 1222334445444333222
Q ss_pred hHHHHHHHHHHhcCCCCceEEc
Q psy3769 415 VRDMLILKNKMKKNNSKTLLLG 436 (974)
Q Consensus 415 e~~~~~l~~~a~~~~~gi~viG 436 (974)
-.+++.|.+..+ +.++.-.+
T Consensus 214 vvde~aL~~aL~--~g~i~gA~ 233 (381)
T 3oet_A 214 VVDNAALLARLN--AGQPLSVV 233 (381)
T ss_dssp GBCHHHHHHHHH--TTCCEEEE
T ss_pred ccCHHHHHHHHH--hCCCeEEE
Confidence 234566777777 66555433
No 308
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=39.29 E-value=14 Score=40.60 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=58.0
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHHHH-cCCc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEAIE-SELE 404 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~~~-~gv~ 404 (974)
|..|..+.+.+...|++ |+.++|... ......-.|.+++++.. ..|++++++|.. .+...+ ++..+ ..-.
T Consensus 155 G~IG~~~A~~l~~~G~~----V~~~d~~~~-~~~~~~~~~~~l~ell~--~aDvV~~~~p~t~~t~~li~~~~l~~mk~g 227 (331)
T 1xdw_A 155 GRIGRVAAQIFHGMGAT----VIGEDVFEI-KGIEDYCTQVSLDEVLE--KSDIITIHAPYIKENGAVVTRDFLKKMKDG 227 (331)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSCC-CSCTTTCEECCHHHHHH--HCSEEEECCCCCTTTCCSBCHHHHHTSCTT
T ss_pred CHHHHHHHHHHHHCCCE----EEEECCCcc-HHHHhccccCCHHHHHh--hCCEEEEecCCchHHHHHhCHHHHhhCCCC
Confidence 56888888999888876 777777641 11221234668888866 789999999964 233333 22222 2334
Q ss_pred EEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 405 LVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 405 ~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
++++-.+--+-.+++.|.+..+ +.++.=.
T Consensus 228 a~lin~srg~~vd~~aL~~aL~--~g~i~gA 256 (331)
T 1xdw_A 228 AILVNCARGQLVDTEAVIEAVE--SGKLGGY 256 (331)
T ss_dssp EEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred cEEEECCCcccccHHHHHHHHH--hCCceEE
Confidence 4444443222234556777777 6555533
No 309
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=39.10 E-value=25 Score=35.26 Aligned_cols=83 Identities=14% Similarity=0.039 Sum_probs=50.3
Q ss_pred cccccCcccccchhhhh-ccCCCCceEEEEecCCCC--Cccc----cc-------cccccchhhhcccCCCcEEEEEecc
Q psy3769 323 IFGITGKTGRFHTNLCL-NYGNGKKAFVAGVNPKKN--GQKF----EE-------IPIFDTVKNAKNETGATVSVIYVPA 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~-~~g~~g~~~V~pVnP~~~--g~~i----~G-------~~~y~sl~dip~~~~vDlavi~vp~ 388 (974)
|.|.++..|..+.+.|. +.|++ |..+..+.. .++. .+ +.-..++.++.+ .+|+++.+...
T Consensus 10 VtGasg~iG~~~~~~l~~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag~ 83 (221)
T 3r6d_A 10 ILGAAGQIAQXLTATLLTYTDMH----ITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAME 83 (221)
T ss_dssp EESTTSHHHHHHHHHHHHHCCCE----EEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCCC
T ss_pred EEeCCcHHHHHHHHHHHhcCCce----EEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCCC
Confidence 47888889999999998 78886 444433210 0111 11 111234444444 78988877654
Q ss_pred hh--HHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 IF--ATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 ~~--v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.. +..+++.|.+.|++.+|.+|+
T Consensus 84 ~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 84 SGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CChhHHHHHHHHHhcCCCeEEEEee
Confidence 11 556677777788888777775
No 310
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=38.94 E-value=23 Score=38.84 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=31.8
Q ss_pred chhhhcc-cCCCcEEEEEecchhHHHHHHHHHHcCCcEEEE
Q psy3769 369 TVKNAKN-ETGATVSVIYVPAIFATSAIWEAIESELELVIC 408 (974)
Q Consensus 369 sl~dip~-~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi 408 (974)
+.+++|- +..+|+++.++|.....+.....+++|+|.+|+
T Consensus 76 dp~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVI 116 (331)
T 2g82_O 76 DPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVII 116 (331)
T ss_dssp SGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence 4555652 126899999999999999999999999998554
No 311
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=38.84 E-value=17 Score=40.51 Aligned_cols=103 Identities=8% Similarity=-0.016 Sum_probs=61.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---ccccccccchhhhcccCCCcEEEEEecch-hHHHHHH-H
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---FEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW-E 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~-e 397 (974)
|+| .|..|..+.+.+..+|++ .|+..++.....+ -.|...+.+++++.. ..|++++++|.. .+..++. +
T Consensus 169 IIG-~G~IG~~vA~~l~~~G~~---~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~ 242 (364)
T 2j6i_A 169 TIG-AGRIGYRVLERLVPFNPK---ELLYYDYQALPKDAEEKVGARRVENIEELVA--QADIVTVNAPLHAGTKGLINKE 242 (364)
T ss_dssp EEC-CSHHHHHHHHHHGGGCCS---EEEEECSSCCCHHHHHHTTEEECSSHHHHHH--TCSEEEECCCCSTTTTTCBCHH
T ss_pred EEC-cCHHHHHHHHHHHhCCCc---EEEEECCCccchhHHHhcCcEecCCHHHHHh--cCCEEEECCCCChHHHHHhCHH
Confidence 345 357888899999988886 3677776531111 236665678999876 799999999985 3333332 2
Q ss_pred HHH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 398 AIE-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 398 ~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
..+ ..-.++++-.+--+-.++++|.+..+ +.++.
T Consensus 243 ~l~~mk~ga~lIn~arG~~vd~~aL~~aL~--~g~i~ 277 (364)
T 2j6i_A 243 LLSKFKKGAWLVNTARGAICVAEDVAAALE--SGQLR 277 (364)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred HHhhCCCCCEEEECCCCchhCHHHHHHHHH--cCCCc
Confidence 222 23344333333222234566777777 55554
No 312
>2hvy_B GAR1, small nucleolar RNP similar to GAR1; H/ACA RNA, RNP, pseudouridine synthase, guide RNA, isomerase biosynthetic protein-RNA complex; HET: ATP; 2.30A {Pyrococcus furiosus} SCOP: b.43.3.5 PDB: 3hay_B*
Probab=38.80 E-value=40 Score=30.50 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=19.7
Q ss_pred cCeEEEecCCcEeEEEEEeecC
Q psy3769 945 IDCIVENIHGKLLGTVTEIIQN 966 (974)
Q Consensus 945 iG~~V~d~~g~~lG~V~~v~~~ 966 (974)
+|..|+|++.+.+|+|.||+=.
T Consensus 33 ~na~Vy~enk~~IGKV~DIfGP 54 (104)
T 2hvy_B 33 LNDRVVDKRLQFVGIVKDVFGP 54 (104)
T ss_dssp TTCEEECTTCCEEEEEEEEEEE
T ss_pred CCCEeEcCCCCEeEEEEEEECC
Confidence 3899999999999999999854
No 313
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=38.75 E-value=31 Score=35.35 Aligned_cols=50 Identities=14% Similarity=0.188 Sum_probs=37.4
Q ss_pred HHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh--cCCCCEEEEecccC
Q psy3769 504 IDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK--NMKKPVIGFIAGIT 553 (974)
Q Consensus 504 ~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~--~~~KPVv~lk~Grs 553 (974)
.+.|.++.+|+..+.|.+|+.+-|..-..+....+. ..+|||+++..|..
T Consensus 63 ~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~~~~pV~t~v~G~A 114 (218)
T 1y7o_A 63 IAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMA 114 (218)
T ss_dssp HHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEccEe
Confidence 345667788999999999999876544455555555 56799999998875
No 314
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=37.89 E-value=19 Score=39.11 Aligned_cols=84 Identities=14% Similarity=0.012 Sum_probs=53.2
Q ss_pred cccccCcccccchhhhhc-c-CCCCceEEEEecCCCC--Ccc---cccccc-ccchhhhccc---CCCcEEEEEecchhH
Q psy3769 323 IFGITGKTGRFHTNLCLN-Y-GNGKKAFVAGVNPKKN--GQK---FEEIPI-FDTVKNAKNE---TGATVSVIYVPAIFA 391 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~-~-g~~g~~~V~pVnP~~~--g~~---i~G~~~-y~sl~dip~~---~~vDlavi~vp~~~v 391 (974)
|+| ++..|..+++.+.+ . +.+ .+.-+.++.. +.. -.|.+. +.+++++.+. ..+|++++++|.+..
T Consensus 9 IIG-~G~iG~~~~~~l~~~~~~~e---lvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~~h 84 (312)
T 1nvm_B 9 IIG-SGNIGTDLMIKVLRNAKYLE---MGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH 84 (312)
T ss_dssp EEC-CSHHHHHHHHHHHHHCSSEE---EEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred EEc-CcHHHHHHHHHHHhhCcCeE---EEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChHHH
Confidence 456 56677777777754 2 232 3344444320 111 345553 5667777432 368999999999999
Q ss_pred HHHHHHHHHc--CCcEEEEEcC
Q psy3769 392 TSAIWEAIES--ELELVICITE 411 (974)
Q Consensus 392 ~~~v~e~~~~--gv~~~vi~s~ 411 (974)
.+...+|.++ |.. +++.+.
T Consensus 85 ~~~a~~al~a~~Gk~-Vi~ekp 105 (312)
T 1nvm_B 85 VQNEALLRQAKPGIR-LIDLTP 105 (312)
T ss_dssp HHHHHHHHHHCTTCE-EEECST
T ss_pred HHHHHHHHHhCCCCE-EEEcCc
Confidence 9999999999 855 566554
No 315
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=37.55 E-value=41 Score=38.41 Aligned_cols=61 Identities=16% Similarity=0.140 Sum_probs=39.4
Q ss_pred cccccchhhhcccCCCcEEEEEecch-----------hHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAI-----------FATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~-----------~v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+.+-.+++++.+ ..|+++++||.. .+.+++++..+. .-..+|+..++++....+++.+..+
T Consensus 72 l~~ttd~~ea~~--~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~ 144 (446)
T 4a7p_A 72 LSFTTDLAEGVK--DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIA 144 (446)
T ss_dssp EEEESCHHHHHT--TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEECCHHHHHh--cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHH
Confidence 445567766655 789999997644 477888776653 2335566667776544555555555
No 316
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=37.46 E-value=16 Score=39.96 Aligned_cols=96 Identities=9% Similarity=0.001 Sum_probs=53.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc---ccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---FEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e 397 (974)
|+|. |..|..+.+.+...|++ |+.++++....+ -.|.... +++++.. ..|++++++|... +...+ ++
T Consensus 160 IIG~-G~iG~~iA~~l~~~G~~----V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~--~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 160 IIGL-GRIGQAIARRLKPFGVQ----RFLYTGRQPRPEEAAEFQAEFV-STPELAA--QSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp EECC-SHHHHHHHHHHGGGTCC----EEEEESSSCCHHHHHTTTCEEC-CHHHHHH--HCSEEEECCCCCTTTTTCBSHH
T ss_pred EECc-CHHHHHHHHHHHHCCCE----EEEECCCCcchhHHHhcCceeC-CHHHHHh--hCCEEEEeCCCChHHHHhhCHH
Confidence 4553 67888888999988987 666665531011 1244433 8888765 7899999999742 33333 12
Q ss_pred HH-HcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 398 AI-ESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 398 ~~-~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
.. ...-..+++-.+..+..++.+|.+..+
T Consensus 232 ~~~~mk~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 22 222234344333222223445566666
No 317
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=36.87 E-value=1.2e+02 Score=30.99 Aligned_cols=205 Identities=9% Similarity=0.028 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHhhcCCeEEEEEccccccCcccccchhhhhccCCCCceEEEEecCCCCCccc--cccccccchhhhccc
Q psy3769 299 TIKTITEAFKIMMQQNNLKTILVNIFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF--EEIPIFDTVKNAKNE 376 (974)
Q Consensus 299 ~~~~v~~a~~~il~~~~~~~i~vni~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i--~G~~~y~sl~dip~~ 376 (974)
-..++.+.++..+..-+...++.+.- .. ..-...++.+.+.+.+| .|.+.++.. ..+ .|+|+.--=.+.+..
T Consensus 19 ~~~~~~~gi~~~a~~~g~~~~~~~~~-~~-~~~~~~~~~l~~~~vdg--iI~~~~~~~--~~~~~~~iPvV~~~~~~~~~ 92 (280)
T 3gyb_A 19 WFIDLIQSLSDVLTPKGYRLSVIDSL-TS-QAGTDPITSALSMRPDG--IIIAQDIPD--FTVPDSLPPFVIAGTRITQA 92 (280)
T ss_dssp GGHHHHHHHHHHHGGGTCEEEEECSS-SS-CSSSCHHHHHHTTCCSE--EEEESCC----------CCCEEEESCCCSSS
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCC-Cc-hHHHHHHHHHHhCCCCE--EEecCCCCh--hhHhhcCCCEEEECCCCCCC
Confidence 34667778888888778887765544 22 22344667788888998 553333221 222 466654221222111
Q ss_pred CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHH---HHHHHHhcCCCCceEEccCCccccccCccc---c
Q psy3769 377 TGATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDML---ILKNKMKKNNSKTLLLGPNCPGLIVPEEIK---I 450 (974)
Q Consensus 377 ~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~---~l~~~a~~~~~gi~viGPnc~G~~~~~~~~---~ 450 (974)
...+. |..=..+....+++.+.++|.+.+.+++..... ..+ -..+.++ ++|+.+.-.-..+-.+..... .
T Consensus 93 ~~~~~-V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~-~~~R~~gf~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (280)
T 3gyb_A 93 STHDS-VANDDFRGAEIATKHLIDLGHTHIAHLRVGSGA-GLRRFESFEATMR--AHGLEPLSNDYLGPAVEHAGYTETL 168 (280)
T ss_dssp CSTTE-EEECHHHHHHHHHHHHHHTTCCSEEEECCSSHH-HHHHHHHHHHHHH--HTTCCCEECCCCSCCCHHHHHHHHH
T ss_pred CCCCE-EEechHHHHHHHHHHHHHCCCCeEEEEeCCCch-HHHHHHHHHHHHH--HcCcCCCcccccCCCCHHHHHHHHH
Confidence 12332 333345566778888889999988777754332 222 2355566 666654311111111111110 0
Q ss_pred ccCCCCCCCCCCEEEEeCChhhHHHHHHHHHHcCCc---eEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccC
Q psy3769 451 GIMPGNIHKKGRIGVVSRSGTLTYEVVCQLTELGFG---QSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIG 526 (974)
Q Consensus 451 ~~~~~~~~~~G~va~vSQSG~~~~~~~~~~~~~g~g---~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~ 526 (974)
..+. ..+..-|+++.+..++..++..++++|+. =-.+++.+|. ++.+++ +|....|..-.+.+
T Consensus 169 ~~l~---~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~--------~~~~~~--~p~lttv~~~~~~~ 234 (280)
T 3gyb_A 169 ALLK---EHPEVTAIFSSNDITAIGALGAARELGLRVPEDLSIIGYDNT--------PLAQTR--LINLTTIDDNSIGV 234 (280)
T ss_dssp HHHH---HCTTCCEEEESSHHHHHHHHHHHHHHTCCTTTTCEEEEESCC--------HHHHST--TTCCCEEECCHHHH
T ss_pred HHHh---CCCCCCEEEECChHHHHHHHHHHHHcCCCCCCeeEEEEECCc--------hHhhcc--CCCceEEecCHHHH
Confidence 0110 11345799999999999999999998874 2357777776 233333 56665555545544
No 318
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=36.34 E-value=13 Score=40.36 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=43.9
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEecch-hHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v 395 (974)
|+| .|..|..+.+.+...|++ |+..+|.. +... . .+.+++++.. ..|++++++|.. .+...+
T Consensus 149 IIG-~G~IG~~~A~~l~~~G~~----V~~~d~~~--~~~~-~-~~~~l~ell~--~aDvV~l~~p~~~~t~~li 211 (311)
T 2cuk_A 149 LVG-MGRIGQAVAKRALAFGMR----VVYHARTP--KPLP-Y-PFLSLEELLK--EADVVSLHTPLTPETHRLL 211 (311)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSSC--CSSS-S-CBCCHHHHHH--HCSEEEECCCCCTTTTTCB
T ss_pred EEE-ECHHHHHHHHHHHHCCCE----EEEECCCC--cccc-c-ccCCHHHHHh--hCCEEEEeCCCChHHHhhc
Confidence 345 356888888999888875 77788875 2222 2 3678888866 789999999986 344444
No 319
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.99 E-value=20 Score=38.81 Aligned_cols=50 Identities=6% Similarity=0.178 Sum_probs=37.5
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-CC-cEEEEEcCCCCh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES-EL-ELVICITEGIPV 415 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~-gv-~~~vi~s~G~~e 415 (974)
++++.+.+++.+ +.|++++++|+..+.+++++.... +- ..++.++.|+..
T Consensus 59 ~~~~~~~~~~~~--~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~ 110 (320)
T 3i83_A 59 AAVVRSAAELET--KPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDI 110 (320)
T ss_dssp SCEESCGGGCSS--CCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSC
T ss_pred eeeECCHHHcCC--CCCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCCh
Confidence 456677778764 789999999999999888887542 21 346778889863
No 320
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=35.96 E-value=37 Score=34.43 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHHcCCceEEEeecCCCCCCCCC---HHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh--cCCCCE
Q psy3769 471 TLTYEVVCQLTELGFGQSSAVGIGGDPINGLK---YIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK--NMKKPV 545 (974)
Q Consensus 471 ~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~---~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~--~~~KPV 545 (974)
.-...+.+.+.+.. +|.+++.- .+.+ +.+.|.++.+|+..+.|.+|+.+-|..-..+....++ ..+|||
T Consensus 15 ~~~~~~~~~l~~~r-----ii~l~G~I-~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~~~pV 88 (208)
T 2cby_A 15 SLTDSVYERLLSER-----IIFLGSEV-NDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDI 88 (208)
T ss_dssp CHHHHHHHHHHTTT-----EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHCSSCE
T ss_pred cchhhHHHHhhcCc-----EEEEcCEE-CHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhcCCCE
Confidence 33455555544332 45666651 1222 3444556688899999999999987765555665555 566999
Q ss_pred EEEecccC
Q psy3769 546 IGFIAGIT 553 (974)
Q Consensus 546 v~lk~Grs 553 (974)
+++..|..
T Consensus 89 ~~~v~g~A 96 (208)
T 2cby_A 89 ATYAMGMA 96 (208)
T ss_dssp EEEEEEEE
T ss_pred EEEECcEe
Confidence 99988875
No 321
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=35.89 E-value=15 Score=40.78 Aligned_cols=52 Identities=17% Similarity=0.371 Sum_probs=38.1
Q ss_pred CCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChH---HHHHHHHHHhcCCCCceEE
Q psy3769 378 GATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVR---DMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 378 ~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~---~~~~l~~~a~~~~~gi~vi 435 (974)
++|+++.+++...-..-..+|+++| |. |.++.- |. +-..+.+.|+ ++|.+++
T Consensus 85 ~~D~Vv~AivG~aGL~ptlaAi~aG-K~-vaLANK--EsLV~aG~li~~~a~--~~g~~ll 139 (376)
T 3a06_A 85 KPDITMVAVSGFSGLRAVLASLEHS-KR-VCLANK--ESLVCGGFLVKKKLK--EKGTELI 139 (376)
T ss_dssp CCSEEEECCCSTTHHHHHHHHHHHC-SE-EEECCS--HHHHHHHHHHHHHHH--HHCCEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCC-CE-EEEeCh--HHHHhhHHHHHHHHH--HcCCEEE
Confidence 5899999999988888888899999 54 344322 22 1245677888 8888876
No 322
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=35.89 E-value=27 Score=37.99 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=33.9
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-CC-cEEEEEcCCCC
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES-EL-ELVICITEGIP 414 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~-gv-~~~vi~s~G~~ 414 (974)
+....+++++.+ ..|++++++|+..+.+++++.... .- ..++.++.|+.
T Consensus 78 ~~~~~~~~~~~~--~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 78 VVAVPDVVQAAE--DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp EEEESSHHHHHT--TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred eEEEcCHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 445567777654 789999999999999988876542 11 23455566765
No 323
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=35.60 E-value=6.4e+02 Score=30.73 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=31.9
Q ss_pred CCChhhHHHHHHHHHHHHhhcccCCeeEEeeceeEEcc-CCcEEEEEEEE
Q psy3769 168 SIPKNSLINFYEEIQNIYKSYWETDSLLLEINPLVINS-KNKIISLDIKF 216 (974)
Q Consensus 168 g~~~~~~~~l~~~l~~L~~l~~~~d~~~lEINPL~v~~-~g~~~alDaki 216 (974)
-++.+...+|.++..++-+.|.+ -.-+| +.+.. +|+++.|.+|=
T Consensus 291 ~L~d~~~~~L~~~~~~lE~~yg~--pqDIE---wai~~~~g~L~iLQaRP 335 (794)
T 2ols_A 291 SITDEEITELAHYALTIEKHYGR--PMDIE---WGRDGLDGKLYILQARP 335 (794)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTS--CEEEE---EEECTTTCCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHcCC--CeEEE---EEEECCCCeEEEEEecC
Confidence 45667788888888888887764 34456 66665 46899999984
No 324
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=35.32 E-value=19 Score=39.50 Aligned_cols=103 Identities=13% Similarity=0.179 Sum_probs=59.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc--ccccccccchhhhcccCCCcEEEEEecch-hHHHHHH---
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK--FEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW--- 396 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~--i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~--- 396 (974)
|+| .|..|..+.+.+.+.|++ |+.++|....+. -.|.. +.+++++.. ..|++++++|.. .+...+.
T Consensus 151 IIG-~G~iG~~vA~~l~~~G~~----V~~~d~~~~~~~~~~~g~~-~~~l~e~l~--~aDiVil~vp~~~~t~~~i~~~~ 222 (333)
T 2d0i_A 151 ILG-MGAIGKAIARRLIPFGVK----LYYWSRHRKVNVEKELKAR-YMDIDELLE--KSDIVILALPLTRDTYHIINEER 222 (333)
T ss_dssp EEC-CSHHHHHHHHHHGGGTCE----EEEECSSCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCCCTTTTTSBCHHH
T ss_pred EEc-cCHHHHHHHHHHHHCCCE----EEEECCCcchhhhhhcCce-ecCHHHHHh--hCCEEEEcCCCChHHHHHhCHHH
Confidence 356 367888888899888875 777777651111 12544 347888765 689999999987 4444432
Q ss_pred -HHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEEccC
Q psy3769 397 -EAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLLGPN 438 (974)
Q Consensus 397 -e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~viGPn 438 (974)
...+.| .++-.+.|. ..++.+|.+..+ +..+.-.|-.
T Consensus 223 ~~~mk~g--ilin~srg~-~vd~~aL~~aL~--~~~i~gaglD 260 (333)
T 2d0i_A 223 VKKLEGK--YLVNIGRGA-LVDEKAVTEAIK--QGKLKGYATD 260 (333)
T ss_dssp HHHTBTC--EEEECSCGG-GBCHHHHHHHHH--TTCBCEEEES
T ss_pred HhhCCCC--EEEECCCCc-ccCHHHHHHHHH--cCCceEEEec
Confidence 222334 223333332 223445666666 5555544433
No 325
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=35.05 E-value=18 Score=39.83 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=60.3
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~ 398 (974)
|+| .|..|..+.+.+...|++ |+.++|..... .-.|.. +.+++++.+ ..|++++++|... +...+ ++.
T Consensus 170 IIG-lG~IG~~vA~~l~~~G~~----V~~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~ 241 (335)
T 2g76_A 170 ILG-LGRIGREVATRMQSFGMK----TIGYDPIISPEVSASFGVQ-QLPLEEIWP--LCDFITVHTPLLPSTTGLLNDNT 241 (335)
T ss_dssp EEC-CSHHHHHHHHHHHTTTCE----EEEECSSSCHHHHHHTTCE-ECCHHHHGG--GCSEEEECCCCCTTTTTSBCHHH
T ss_pred EEe-ECHHHHHHHHHHHHCCCE----EEEECCCcchhhhhhcCce-eCCHHHHHh--cCCEEEEecCCCHHHHHhhCHHH
Confidence 345 256888888999888865 78888875111 123554 458888876 7999999999863 44444 233
Q ss_pred HH-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 399 IE-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 399 ~~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
.+ ..-.++++-.+.-+-.++++|.+..+ +..+.
T Consensus 242 l~~mk~gailIN~arg~vvd~~aL~~aL~--~g~i~ 275 (335)
T 2g76_A 242 FAQCKKGVRVVNCARGGIVDEGALLRALQ--SGQCA 275 (335)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHH--HTSEE
T ss_pred HhhCCCCcEEEECCCccccCHHHHHHHHH--hCCcc
Confidence 33 23345444443322234455666666 55443
No 326
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=34.87 E-value=40 Score=38.59 Aligned_cols=95 Identities=13% Similarity=0.163 Sum_probs=53.6
Q ss_pred cccccCcccccchhhhhcc--CCCCceEEEEecCCCCCccc------------------------cccccccchhhhccc
Q psy3769 323 IFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNGQKF------------------------EEIPIFDTVKNAKNE 376 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g~~i------------------------~G~~~y~sl~dip~~ 376 (974)
++| .|..|..+...+.+. |++ |..++.+. +.+ .++.+..+++++.+
T Consensus 10 VIG-~G~mG~~lA~~La~~g~G~~----V~~~d~~~--~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~- 81 (467)
T 2q3e_A 10 CIG-AGYVGGPTCSVIAHMCPEIR----VTVVDVNE--SRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK- 81 (467)
T ss_dssp EEC-CSTTHHHHHHHHHHHCTTSE----EEEECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH-
T ss_pred EEC-CCHHHHHHHHHHHhcCCCCE----EEEEECCH--HHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHh-
Confidence 345 456677777777766 454 66665542 111 24555567666554
Q ss_pred CCCcEEEEEecchh---------------HHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 377 TGATVSVIYVPAIF---------------ATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 377 ~~vDlavi~vp~~~---------------v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
..|++++++|... +.++.++..+. .-..+|+..+..+....+++.+..+
T Consensus 82 -~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~ 146 (467)
T 2q3e_A 82 -EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFD 146 (467)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHH
T ss_pred -cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHH
Confidence 6899999987533 45666666553 3345555544444333344555555
No 327
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=34.27 E-value=42 Score=38.64 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=39.2
Q ss_pred cccccchhhhcccCCCcEEEEEecc----------hhHHHHHHHHHH-cCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPA----------IFATSAIWEAIE-SELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~----------~~v~~~v~e~~~-~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+.+..++++..+ ..|+++++||. ..+.+++++..+ ..-..+|+..++.+....+++.+...
T Consensus 72 l~~ttd~~~a~~--~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 72 LRFSTDIEAAVA--HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EEEECCHHHHHH--HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEECCHHHHhh--cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 344556655544 68999999998 788888887765 33346666667765333334444444
No 328
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=34.14 E-value=22 Score=38.94 Aligned_cols=96 Identities=18% Similarity=0.077 Sum_probs=59.1
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCccc---cccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHHH-Hc
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF---EEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEAI-ES 401 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i---~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~~-~~ 401 (974)
|..|..+.+.+..+|++ |...+|.. ... .|.. |.+++++-+ ..|++++++|.. .+...+ ++.. ..
T Consensus 150 G~IG~~vA~~l~~~G~~----V~~~d~~~--~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~l~~m 220 (334)
T 2pi1_A 150 GRIGSRVAMYGLAFGMK----VLCYDVVK--REDLKEKGCV-YTSLDELLK--ESDVISLHVPYTKETHHMINEERISLM 220 (334)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSC--CHHHHHTTCE-ECCHHHHHH--HCSEEEECCCCCTTTTTCBCHHHHHHS
T ss_pred CHHHHHHHHHHHHCcCE----EEEECCCc--chhhHhcCce-ecCHHHHHh--hCCEEEEeCCCChHHHHhhCHHHHhhC
Confidence 56888889999988875 78888875 222 2543 556888876 789999999953 333332 2222 23
Q ss_pred CCcEEEEEcCCCChHHHHHHHHHHhcCCCCceE
Q psy3769 402 ELELVICITEGIPVRDMLILKNKMKKNNSKTLL 434 (974)
Q Consensus 402 gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~v 434 (974)
.-.++++=.+--+..+++.|.+..+ +..+.=
T Consensus 221 k~gailIN~aRg~~vd~~aL~~aL~--~g~i~g 251 (334)
T 2pi1_A 221 KDGVYLINTARGKVVDTDALYRAYQ--RGKFSG 251 (334)
T ss_dssp CTTEEEEECSCGGGBCHHHHHHHHH--TTCEEE
T ss_pred CCCcEEEECCCCcccCHHHHHHHHH--hCCceE
Confidence 4445444333222234566777777 666653
No 329
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=40.22 E-value=8.6 Score=38.92 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=43.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc--cccccccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF--EEIPIFDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i--~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .+..|..+.++|.+.|++ |+.++++...+.. .|.... +..++.+ ..|++++++|+..+.+++
T Consensus 24 iIG-~G~mG~~la~~L~~~G~~----V~~~~r~~~~~~~~~~g~~~~-~~~~~~~--~aDvVilav~~~~~~~v~ 90 (201)
T 2yjz_A 24 IFG-TGDFGKSLGLKMLQCGYS----VVFGSRNPQVSSLLPRGAEVL-CYSEAAS--RSDVIVLAVHREHYDFLA 90 (201)
Confidence 456 467888888889888876 4455554311111 255554 6666654 789999999998777665
No 330
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=33.91 E-value=27 Score=36.96 Aligned_cols=84 Identities=15% Similarity=0.104 Sum_probs=52.7
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------------------------------cccccccchhhh
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------------------------------EEIPIFDTVKNA 373 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------------------------------~G~~~y~sl~di 373 (974)
+| .+..|..+...+.+.|++ |..++++. +.. ..+....+++++
T Consensus 10 IG-aG~mG~~iA~~la~~G~~----V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 10 LG-TGVLGSQIAFQTAFHGFA----VTAYDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred EC-CCHHHHHHHHHHHhCCCe----EEEEeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 46 356778888888888876 55566553 211 113456677776
Q ss_pred cccCCCcEEEEEecch--hHHHHHHHHHHc-CCcEEEE-EcCCCChH
Q psy3769 374 KNETGATVSVIYVPAI--FATSAIWEAIES-ELELVIC-ITEGIPVR 416 (974)
Q Consensus 374 p~~~~vDlavi~vp~~--~v~~~v~e~~~~-gv~~~vi-~s~G~~e~ 416 (974)
.. ..|+++.++|.. ...+++++..+. .-..+++ .+++.+.+
T Consensus 83 ~~--~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~ 127 (283)
T 4e12_A 83 VK--DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS 127 (283)
T ss_dssp TT--TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred hc--cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 44 799999999986 556666666543 3344444 45777643
No 331
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.75 E-value=43 Score=33.82 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=52.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCC-ccc--ccc-ccc-----cchhhhcccCCCcEEEEEecch----
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QKF--EEI-PIF-----DTVKNAKNETGATVSVIYVPAI---- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~i--~G~-~~y-----~sl~dip~~~~vDlavi~vp~~---- 389 (974)
|.|.++..|..+.+.|++.|++ |+.+..+... ++. .++ ..+ .++.+... .+|.++-+....
T Consensus 26 VtGatG~iG~~l~~~L~~~G~~----V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~D~vi~~ag~~~~~~ 99 (236)
T 3e8x_A 26 VVGANGKVARYLLSELKNKGHE----PVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFA--SIDAVVFAAGSGPHTG 99 (236)
T ss_dssp EETTTSHHHHHHHHHHHHTTCE----EEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGT--TCSEEEECCCCCTTSC
T ss_pred EECCCChHHHHHHHHHHhCCCe----EEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHc--CCCEEEECCCCCCCCC
Confidence 5788889999999999998886 4444333200 010 022 111 44455544 799888776432
Q ss_pred ----------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 ----------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 ----------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
....+++.|.+.|++.+|.+|+
T Consensus 100 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 100 ADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 2456778888889998777775
No 332
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=33.44 E-value=44 Score=35.89 Aligned_cols=83 Identities=11% Similarity=-0.000 Sum_probs=53.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc----cccccccchhhhcccCCCcEEEEEecc----------
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF----EEIPIFDTVKNAKNETGATVSVIYVPA---------- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i----~G~~~y~sl~dip~~~~vDlavi~vp~---------- 388 (974)
|.|.++-.|..+.+.|++.|++ ++....... ...+ ..+.-..++.++.+ .+|.++-+...
T Consensus 24 VtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~ 97 (347)
T 4id9_A 24 VTGSAGRVGRAVVAALRTQGRT---VRGFDLRPS-GTGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSWAPADRDR 97 (347)
T ss_dssp EETTTSHHHHHHHHHHHHTTCC---EEEEESSCC-SSCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCSSGGGHHH
T ss_pred EECCCChHHHHHHHHHHhCCCE---EEEEeCCCC-CCCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCcchhhHHH
Confidence 5788889999999999999987 333333221 1111 12333344555554 78988765432
Q ss_pred ------hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 ------IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 ------~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
..+..+++.|.+.|++.+|.+|+
T Consensus 98 ~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 98 MFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 12355788888889988887776
No 333
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=33.40 E-value=39 Score=35.28 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=50.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCC-ccc--c---cc-----ccccchhhhcccCCCcEEEEEecchhH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QKF--E---EI-----PIFDTVKNAKNETGATVSVIYVPAIFA 391 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~i--~---G~-----~~y~sl~dip~~~~vDlavi~vp~~~v 391 (974)
|+|. |..|..+...|.+.|++ |+.++++... +.+ . |. ....+. +..+ +.|++++++|+..+
T Consensus 5 iiG~-G~~G~~~a~~l~~~g~~----V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 5 VLGC-GALGQLWLTALCKQGHE----VQGWLRVPQPYCSVNLVETDGSIFNESLTANDP-DFLA--TSDLLLVTLKAWQV 76 (291)
T ss_dssp EECC-SHHHHHHHHHHHHTTCE----EEEECSSCCSEEEEEEECTTSCEEEEEEEESCH-HHHH--TCSEEEECSCGGGH
T ss_pred EECc-CHHHHHHHHHHHhCCCC----EEEEEcCccceeeEEEEcCCCceeeeeeeecCc-cccC--CCCEEEEEecHHhH
Confidence 4563 66777777788877765 5556554310 111 1 11 012232 3323 68999999999999
Q ss_pred HHHHHHHHHc-CC-cEEEEEcCCCCh
Q psy3769 392 TSAIWEAIES-EL-ELVICITEGIPV 415 (974)
Q Consensus 392 ~~~v~e~~~~-gv-~~~vi~s~G~~e 415 (974)
.+++++.... +- ..++.++.|+..
T Consensus 77 ~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 77 SDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp HHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred HHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 9988877643 11 234556777743
No 334
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=33.05 E-value=19 Score=39.55 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=56.1
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCcccc-ccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHH-HHcCC
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFE-EIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEA-IESEL 403 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~-G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~-~~~gv 403 (974)
|..|..+.+.+...|++ |+.++|... .... +.....+++++.+ ..|++++++|... +..++ ++. ....-
T Consensus 155 G~IG~~~A~~l~~~G~~----V~~~d~~~~-~~~~~~~~~~~~l~ell~--~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 227 (333)
T 1j4a_A 155 GHIGQVFMQIMEGFGAK----VITYDIFRN-PELEKKGYYVDSLDDLYK--QADVISLHVPDVPANVHMINDESIAKMKQ 227 (333)
T ss_dssp SHHHHHHHHHHHHTTCE----EEEECSSCC-HHHHHTTCBCSCHHHHHH--HCSEEEECSCCCGGGTTCBSHHHHHHSCT
T ss_pred CHHHHHHHHHHHHCCCE----EEEECCCcc-hhHHhhCeecCCHHHHHh--hCCEEEEcCCCcHHHHHHHhHHHHhhCCC
Confidence 56888888999888876 777887651 1111 2222338888765 7899999999543 33333 122 22233
Q ss_pred cEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 404 ELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 404 ~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
.++++-.+--+-.+++.|.+..+ +.++.
T Consensus 228 ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 255 (333)
T 1j4a_A 228 DVVIVNVSRGPLVDTDAVIRGLD--SGKIF 255 (333)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred CcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 44434333222234566777777 55554
No 335
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=33.04 E-value=44 Score=33.87 Aligned_cols=83 Identities=16% Similarity=0.076 Sum_probs=48.3
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCC-Ccccc--cc-------ccccchhhhcccCCCcEEEEEecchh-
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKN-GQKFE--EI-------PIFDTVKNAKNETGATVSVIYVPAIF- 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~-g~~i~--G~-------~~y~sl~dip~~~~vDlavi~vp~~~- 390 (974)
|.|.++..|..+.+.|++.| ++ |..+..+.. ..+.. ++ .-..+++++.+ .+|.++.+.....
T Consensus 28 VtGatG~iG~~l~~~L~~~G~~~----V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 28 ILGAGGQIARHVINQLADKQTIK----QTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGEDL 101 (236)
T ss_dssp EETTTSHHHHHHHHHHTTCTTEE----EEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCSTTH
T ss_pred EEeCCcHHHHHHHHHHHhCCCce----EEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCch
Confidence 57888889999999999888 65 444332210 01111 11 11223334444 6788776665432
Q ss_pred ---HHHHHHHHHHcCCcEEEEEcC
Q psy3769 391 ---ATSAIWEAIESELELVICITE 411 (974)
Q Consensus 391 ---v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+..+++.|.+.|++.+|.+|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEec
Confidence 344566666778887777775
No 336
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=32.41 E-value=34 Score=37.99 Aligned_cols=100 Identities=9% Similarity=0.081 Sum_probs=61.0
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecch-hHHHHH-HHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAI-WEAI 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v-~e~~ 399 (974)
+| .|..|..+.+.+..+|++ |...+|....+ .-.|.. +.+++++-+ ..|++++++|.. .+...+ ++..
T Consensus 182 IG-lG~IG~~vA~~l~~fG~~----V~~~d~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~Plt~~T~~li~~~~l 253 (365)
T 4hy3_A 182 VG-FGDLGKALRRVLSGFRAR----IRVFDPWLPRSMLEENGVE-PASLEDVLT--KSDFIFVVAAVTSENKRFLGAEAF 253 (365)
T ss_dssp EC-CSHHHHHHHHHHTTSCCE----EEEECSSSCHHHHHHTTCE-ECCHHHHHH--SCSEEEECSCSSCC---CCCHHHH
T ss_pred ec-CCcccHHHHHhhhhCCCE----EEEECCCCCHHHHhhcCee-eCCHHHHHh--cCCEEEEcCcCCHHHHhhcCHHHH
Confidence 45 356888889999888875 77778764111 124554 679999977 899999999964 333333 2233
Q ss_pred H-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 400 E-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 400 ~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
+ .+-.++++-++--+-.+++.|.+..+ +..+.
T Consensus 254 ~~mk~gailIN~aRG~~vde~aL~~aL~--~g~i~ 286 (365)
T 4hy3_A 254 SSMRRGAAFILLSRADVVDFDALMAAVS--SGHIV 286 (365)
T ss_dssp HTSCTTCEEEECSCGGGSCHHHHHHHHH--TTSSE
T ss_pred hcCCCCcEEEECcCCchhCHHHHHHHHH--cCCce
Confidence 2 34444444443223334566778787 76666
No 337
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=32.03 E-value=66 Score=35.32 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=33.3
Q ss_pred chhhhccc-CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 369 TVKNAKNE-TGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 369 sl~dip~~-~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+.+++|-. ..+|+++.++|.....+......++|++.+ +++.
T Consensus 81 dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkV-VId~ 123 (339)
T 3b1j_A 81 NPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKV-LITA 123 (339)
T ss_dssp CGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEE-EESS
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEE-EEeC
Confidence 55676521 279999999999999999999999999984 5554
No 338
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=31.70 E-value=70 Score=34.20 Aligned_cols=50 Identities=4% Similarity=-0.003 Sum_probs=36.5
Q ss_pred cccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-CC-cEEEEEcCCCChH
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES-EL-ELVICITEGIPVR 416 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~-gv-~~~vi~s~G~~e~ 416 (974)
++++.+.+++. +.|++++++|+..+.+++++.... +- ..++.++.|+...
T Consensus 58 ~~~~~~~~~~~---~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~ 109 (312)
T 3hn2_A 58 VKGYRAPEEIG---PMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE 109 (312)
T ss_dssp CCEESCHHHHC---CCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH
T ss_pred ceeecCHHHcC---CCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH
Confidence 44566776653 689999999999999999887653 22 3467778898643
No 339
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=31.58 E-value=93 Score=27.09 Aligned_cols=66 Identities=18% Similarity=0.073 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCCCCCceeeCCHHHHHHHHHHc-CC--CcEEEEeeeecCcccccCeEEEeCCHHHHHHHHHHHHhcc
Q psy3769 6 YQGKEILRKFNVTIPKGILCMNVDEAIKAAKKI-GG--NSWVIKAQIHAGGRGKCGGIKLAQSLEQVEKYTKKILGMQ 80 (974)
Q Consensus 6 ~~ak~lL~~~GIpvp~~~~~~s~eea~~~a~~i-g~--~PvVvK~qi~~ggrgk~GGV~l~~s~ee~~~a~~~~l~~~ 80 (974)
..+|++|++.||+--.--+-.+++......+.. |. -|+|+ .+ - |-+...-+++|++++.+++.+-.
T Consensus 18 ~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-----i~-D---g~~l~~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 18 LRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-----FA-D---GSTLTNPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp HHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-----ET-T---SCEEESCCHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-----Ee-C---CEEEeCCCHHHHHHHHHHhcCCc
Confidence 368999999999865444445555444433322 31 24433 21 1 12333458999999988887643
No 340
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=31.50 E-value=8.9 Score=40.31 Aligned_cols=96 Identities=16% Similarity=-0.002 Sum_probs=57.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc------cccccccchhhhcccCCCcEEEEEecchhHH---H
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF------EEIPIFDTVKNAKNETGATVSVIYVPAIFAT---S 393 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i------~G~~~y~sl~dip~~~~vDlavi~vp~~~v~---~ 393 (974)
++|. +..|..+.+.|.+.|++ |+.+|++. +.. .|.. +.+++++ . ..|++++++|....+ +
T Consensus 121 iiG~-G~~g~~~a~~l~~~g~~----v~v~~r~~--~~~~~l~~~~~~~-~~~~~~~-~--~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 121 VLGA-GGAGRAVAFALREAGLE----VWVWNRTP--QRALALAEEFGLR-AVPLEKA-R--EARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp EECC-SHHHHHHHHHHHHTTCC----EEEECSSH--HHHHHHHHHHTCE-ECCGGGG-G--GCSEEEECSSTTTTCTTCC
T ss_pred EECC-cHHHHHHHHHHHHCCCE----EEEEECCH--HHHHHHHHHhccc-hhhHhhc-c--CCCEEEEccCCCCCCCCCC
Confidence 3563 45777788888887874 67777764 211 1333 6677777 5 799999999987532 2
Q ss_pred HH-HHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 394 AI-WEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 394 ~v-~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
.+ .++.+.|. +++.-++...+. ++.+.++ +.|.+++
T Consensus 190 ~l~~~~l~~g~---~viD~~~~p~~t-~l~~~a~--~~g~~~v 226 (263)
T 2d5c_A 190 PLPAELFPEEG---AAVDLVYRPLWT-RFLREAK--AKGLKVQ 226 (263)
T ss_dssp SSCGGGSCSSS---EEEESCCSSSSC-HHHHHHH--HTTCEEE
T ss_pred CCCHHHcCCCC---EEEEeecCCccc-HHHHHHH--HCcCEEE
Confidence 22 23333332 333433321122 4677788 7888877
No 341
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=31.49 E-value=49 Score=33.07 Aligned_cols=50 Identities=8% Similarity=0.039 Sum_probs=37.6
Q ss_pred HHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh--cCCCCEEEEecccC
Q psy3769 504 IDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK--NMKKPVIGFIAGIT 553 (974)
Q Consensus 504 ~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~--~~~KPVv~lk~Grs 553 (974)
...|.++.+|+..+.|.+|+.+-|..-..+....++ ..++||+++..|..
T Consensus 44 ~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g~A 95 (193)
T 1yg6_A 44 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQA 95 (193)
T ss_dssp HHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEeeeH
Confidence 345556777888999999999987765556666555 55689999998875
No 342
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=31.48 E-value=15 Score=40.17 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=58.5
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCC-ccccccccccchhhhcccCCCcEEEEEecch-hHHHHHH-HHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QKFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW-EAIE 400 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~-e~~~ 400 (974)
+| .|..|..+.+.+..+|++ |...++.... ....+...+.+++++-+ ..|++++++|.. .+...+. +..+
T Consensus 146 IG-lG~IG~~vA~~l~~~G~~----V~~~dr~~~~~~~~~~~~~~~~l~ell~--~aDvV~l~lPlt~~T~~li~~~~l~ 218 (324)
T 3hg7_A 146 LG-TGSIGQHIAHTGKHFGMK----VLGVSRSGRERAGFDQVYQLPALNKMLA--QADVIVSVLPATRETHHLFTASRFE 218 (324)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEECSSCCCCTTCSEEECGGGHHHHHH--TCSEEEECCCCCSSSTTSBCTTTTT
T ss_pred EE-ECHHHHHHHHHHHhCCCE----EEEEcCChHHhhhhhcccccCCHHHHHh--hCCEEEEeCCCCHHHHHHhHHHHHh
Confidence 44 356888899999988886 7777765411 12223334678999876 899999999953 3333332 2222
Q ss_pred -cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 401 -SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 401 -~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
..-.+++|-.+--+-.+++.|.+..+ +..+.
T Consensus 219 ~mk~gailIN~aRG~~vde~aL~~aL~--~g~i~ 250 (324)
T 3hg7_A 219 HCKPGAILFNVGRGNAINEGDLLTALR--TGKLG 250 (324)
T ss_dssp CSCTTCEEEECSCGGGBCHHHHHHHHH--TTSSS
T ss_pred cCCCCcEEEECCCchhhCHHHHHHHHH--cCCce
Confidence 23334333333222234556677777 55553
No 343
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=31.13 E-value=23 Score=39.22 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=31.9
Q ss_pred chhhhcc-cCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 369 TVKNAKN-ETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 369 sl~dip~-~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+.+++|- +..+|+++.++|.....+.....+++|+|.+ |++.
T Consensus 95 dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~Gakkv-VId~ 137 (354)
T 3cps_A 95 DPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKV-IISA 137 (354)
T ss_dssp CGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEE-EESS
T ss_pred ChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEE-EEeC
Confidence 4455541 0279999999999999999999999999984 5553
No 344
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=31.05 E-value=27 Score=39.61 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=68.7
Q ss_pred CCEEEEeCChhhHHHHHHHHHHcCC--ceEEEeecCCCCCCCCCHHH----HHHHhhhCCCccEEEEEEccCCCchH-HH
Q psy3769 461 GRIGVVSRSGTLTYEVVCQLTELGF--GQSSAVGIGGDPINGLKYID----ILKLFNEDQNTDAVIMIGEIGGLDEI-YA 533 (974)
Q Consensus 461 G~va~vSQSG~~~~~~~~~~~~~g~--g~s~~vs~Gn~a~~dv~~~d----~l~~l~~Dp~t~~I~ly~E~~g~~~~-~~ 533 (974)
|+|+.+.-.++++.+.++.....|- -..-|.-+|+.+ ..-.+.+ .++-+..||+.++|++-+=+.=.... -+
T Consensus 273 G~Ig~mvNGaGlamat~D~i~~~Gg~~~pANflD~gG~a-~~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~cd~vA 351 (425)
T 3mwd_A 273 GRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAP-SEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVA 351 (425)
T ss_dssp CSEEECCBSHHHHHHHHHHHHHTTCGGGBCEEEEEESCC-CHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSSCHH
T ss_pred CeEEEEecCchHHHHHHHHHHHcCCCcCCcceEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccHHHHH
Confidence 8999999999999999999998887 478899999875 1112333 37788889999999885432111112 23
Q ss_pred ---HHHHHh---------cCCCCEEEEecccCCCCCCC
Q psy3769 534 ---ANWIKK---------NMKKPVIGFIAGITAPPGKR 559 (974)
Q Consensus 534 ---~~f~~~---------~~~KPVv~lk~Grs~~~g~~ 559 (974)
+-.+++ ..++|||+=..|...+.|++
T Consensus 352 ~t~~GIi~A~~~~~~~~~~~~~PivVRl~Gtn~~eg~~ 389 (425)
T 3mwd_A 352 ATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLR 389 (425)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTEEEEEECBSTTHHHHHH
T ss_pred HHHhHHHHHHHHhhhccccCCCcEEEECCcCCHHHHHH
Confidence 333444 14799999888877545554
No 345
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=31.04 E-value=42 Score=35.24 Aligned_cols=83 Identities=20% Similarity=0.100 Sum_probs=50.7
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCCCcc-----cccccc-------ccchhhhcccCCCcEEEEEecc-
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKNGQK-----FEEIPI-------FDTVKNAKNETGATVSVIYVPA- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~g~~-----i~G~~~-------y~sl~dip~~~~vDlavi~vp~- 388 (974)
|.|.++..|..+.+.|++.| ++ |..+..+..... -.|+.. ..++.++.+ .+|.++.+.+.
T Consensus 10 VtGatG~iG~~l~~~L~~~g~~~----V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~ 83 (299)
T 2wm3_A 10 VFGGTGAQGGSVARTLLEDGTFK----VRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN--GAYATFIVTNYW 83 (299)
T ss_dssp EETTTSHHHHHHHHHHHHHCSSE----EEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCHH
T ss_pred EECCCchHHHHHHHHHHhcCCce----EEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh--cCCEEEEeCCCC
Confidence 47988999999999999877 66 444432210110 112222 234445544 78988877642
Q ss_pred ---------hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 ---------IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 ---------~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.....+++.|.+.|++.+|..|+
T Consensus 84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 13446677788889998666543
No 346
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=30.98 E-value=52 Score=35.91 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=52.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCc---cc---ccc--------ccccchhhhcccCCCcEEEEEecc
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ---KF---EEI--------PIFDTVKNAKNETGATVSVIYVPA 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~---~i---~G~--------~~y~sl~dip~~~~vDlavi~vp~ 388 (974)
|.|.++..|..+.+.|++.|++ ++..+.... .. .. .++ .-..++.++.+ .+|.++.+...
T Consensus 10 VtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~-~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~~ 83 (352)
T 1xgk_A 10 VVGATGRQGASLIRVAAAVGHH---VRAQVHSLK-GLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTTS 83 (352)
T ss_dssp EESTTSHHHHHHHHHHHHTTCC---EEEEESCSC-SHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCCS
T ss_pred EECCCCHHHHHHHHHHHhCCCE---EEEEECCCC-hhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEcCCC
Confidence 4798999999999999988887 343332221 01 00 122 12223444444 78988866543
Q ss_pred h------hHHHHHHHHHHcC-CcEEEEEcCC
Q psy3769 389 I------FATSAIWEAIESE-LELVICITEG 412 (974)
Q Consensus 389 ~------~v~~~v~e~~~~g-v~~~vi~s~G 412 (974)
. ....+++.|.+.| ++.+|.+|+.
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 2 2355777787889 9988888764
No 347
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=30.61 E-value=51 Score=35.46 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=36.7
Q ss_pred ccccccchhhhcccCCCcEEEEEecchhHHHHHHHHHHc-CC-cEEEEEcCCCChH
Q psy3769 363 EIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEAIES-EL-ELVICITEGIPVR 416 (974)
Q Consensus 363 G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~~~~-gv-~~~vi~s~G~~e~ 416 (974)
.+++..+.+++ + +.|++++++|+..+.+++++.... +- ..++.++.|+...
T Consensus 74 ~~~~~~~~~~~-~--~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~ 126 (318)
T 3hwr_A 74 KVSASSDPSAV-Q--GADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENA 126 (318)
T ss_dssp CCEEESCGGGG-T--TCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHH
T ss_pred eeeeeCCHHHc-C--CCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcH
Confidence 44556666665 2 689999999999999999887542 21 2456788998754
No 348
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=30.59 E-value=63 Score=33.83 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.8
Q ss_pred cccccCcccccchhhhhccCCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNG 344 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~ 344 (974)
|.|.++..|..+++.|++.|++
T Consensus 9 VtGatG~iG~~l~~~L~~~g~~ 30 (308)
T 1qyc_A 9 LIGATGYIGRHVAKASLDLGHP 30 (308)
T ss_dssp EESTTSTTHHHHHHHHHHTTCC
T ss_pred EEcCCcHHHHHHHHHHHhCCCC
Confidence 5799999999999999998987
No 349
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=30.50 E-value=49 Score=36.20 Aligned_cols=100 Identities=10% Similarity=0.046 Sum_probs=55.8
Q ss_pred HHHHHHhhc--CCeEEEEEccccccCcccccchhhhhccC-CCCceEEEEecCCCCCccccc--ccccc--chhhhcc-c
Q psy3769 305 EAFKIMMQQ--NNLKTILVNIFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKNGQKFEE--IPIFD--TVKNAKN-E 376 (974)
Q Consensus 305 ~a~~~il~~--~~~~~i~vni~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~g~~i~G--~~~y~--sl~dip~-~ 376 (974)
+.+++++.+ |++..+.||=...+...++. +++=-.+| |.+ .|.+.+.+- .+.| ++++. +.+++|- +
T Consensus 14 ~llR~l~~~~~p~~eivain~~~~~~~~~~l-l~~ds~~g~~~~--~v~~~~~~l---~v~g~~i~v~~~~dp~~l~w~~ 87 (332)
T 1hdg_O 14 LVYRIIYERKNPDIEVVAINDLTDTKTLAHL-LKYDSVHKKFPG--KVEYTENSL---IVDGKEIKVFAEPDPSKLPWKD 87 (332)
T ss_dssp HHHHHHHHHTCTTCEEEEEECSSCHHHHHHH-HHCCTTTCCCSS--CEEECSSEE---EETTEEEEEECCSSGGGSCHHH
T ss_pred HHHHHHHhCCCCCeEEEEEEcCCChHHhhhh-ccCcCcCCCcCC--cEEEcCCEE---EECCeEEEEEecCChHHCcccc
Confidence 456677777 88888766654322112211 11111122 443 343321111 1122 34442 4555541 1
Q ss_pred CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 377 TGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 377 ~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
..+|+++.++|.....+......++|+|.+ |++.
T Consensus 88 ~~vDvV~~atg~~~s~e~a~~~l~aGakkv-VId~ 121 (332)
T 1hdg_O 88 LGVDFVIESTGVFRNREKAELHLQAGAKKV-IITA 121 (332)
T ss_dssp HTCCEEEECSSSCCBHHHHTHHHHTTCSEE-EESS
T ss_pred cCCCEEEECCccchhHHHHHHHHHcCCcEE-EEeC
Confidence 269999999999999999999999999984 5553
No 350
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=30.47 E-value=38 Score=35.09 Aligned_cols=83 Identities=13% Similarity=0.182 Sum_probs=50.3
Q ss_pred cccccCcccccchhhhhcc--CCCCceEEEEecCCC-CCccc--cccc-------cccchhhhcccCCCcEEEEEecc--
Q psy3769 323 IFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKK-NGQKF--EEIP-------IFDTVKNAKNETGATVSVIYVPA-- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~-~g~~i--~G~~-------~y~sl~dip~~~~vDlavi~vp~-- 388 (974)
|.|.++..|..+.+.|++. |++ |+.+..+. ..++. .++. -..++.++.+ .+|.++-+...
T Consensus 4 VtGatG~iG~~l~~~L~~~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~ 77 (286)
T 2zcu_A 4 ITGATGQLGHYVIESLMKTVPASQ----IVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQ--GVEKLLLISSSEV 77 (286)
T ss_dssp EESTTSHHHHHHHHHHTTTSCGGG----EEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECC----
T ss_pred EEcCCchHHHHHHHHHHhhCCCce----EEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc
Confidence 4688888999999999887 776 43332221 01111 1222 2234445544 68988766543
Q ss_pred ----hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 ----IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 ----~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
..+..+++.|.+.|++.+|.+|+
T Consensus 78 ~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 78 GQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ----CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 34566778888889998877775
No 351
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.28 E-value=55 Score=34.68 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=47.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc------cccccc-------ccchhhhcccCCCcEEEEEecc-
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK------FEEIPI-------FDTVKNAKNETGATVSVIYVPA- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~------i~G~~~-------y~sl~dip~~~~vDlavi~vp~- 388 (974)
|.|.++..|..+.+.|++.|++ ++..+.......+ -.|+.+ ..++.++.+ .+|.++.+.+.
T Consensus 16 VtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~~ 90 (318)
T 2r6j_A 16 IFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAFP 90 (318)
T ss_dssp EETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCGG
T ss_pred EECCCchHHHHHHHHHHHCCCc---EEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCchh
Confidence 4799999999999999998987 3333322110011 123222 223444443 67877776653
Q ss_pred --hhHHHHHHHHHHcC-CcEEE
Q psy3769 389 --IFATSAIWEAIESE-LELVI 407 (974)
Q Consensus 389 --~~v~~~v~e~~~~g-v~~~v 407 (974)
.....+++.|.+.| ++.+|
T Consensus 91 ~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 91 QILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp GSTTHHHHHHHHHHHCCCCEEE
T ss_pred hhHHHHHHHHHHHhcCCCCEEE
Confidence 33556777777777 88754
No 352
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=30.17 E-value=45 Score=39.53 Aligned_cols=79 Identities=19% Similarity=0.192 Sum_probs=50.0
Q ss_pred CCCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHH---HH
Q psy3769 459 KKGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYA---AN 535 (974)
Q Consensus 459 ~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~---~~ 535 (974)
..++|++|.-.|.... +.. ..+.. .--.+.+.|+.+.+||++|+|++.+++-|..-... ++
T Consensus 299 ~~~~VavI~l~g~i~~---------n~~-----~~~~~--~~~~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~~~~i~~ 362 (593)
T 3bf0_A 299 TGDSIGVVFANGAIMD---------GEE-----TQGNV--GGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRA 362 (593)
T ss_dssp CSCEEEEEEEEEEEES---------SSS-----CTTSE--EHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHH
T ss_pred CCCCEEEEEEeeeecC---------Ccc-----ccchh--HHHHHHHHHHHHHhCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 4567999998887531 110 01111 12346778888899999999999998755332222 22
Q ss_pred HHHh--cCCCCEEEEecccC
Q psy3769 536 WIKK--NMKKPVIGFIAGIT 553 (974)
Q Consensus 536 f~~~--~~~KPVv~lk~Grs 553 (974)
.++. ..+||||+.-.|..
T Consensus 363 ~i~~l~~~~kPVia~v~g~A 382 (593)
T 3bf0_A 363 ELAAARAAGKPVVVSMGGMA 382 (593)
T ss_dssp HHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEEECCCh
Confidence 2222 56799999987775
No 353
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=30.08 E-value=22 Score=41.65 Aligned_cols=99 Identities=14% Similarity=0.197 Sum_probs=60.6
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecch-hHHHHHHH-HH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIWE-AI 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~e-~~ 399 (974)
+| .|..|..+.+.+.+.|++ |+..+|..... .-.|.... +++++.. ..|++++++|.. .+..++.+ ..
T Consensus 148 IG-~G~IG~~vA~~l~~~G~~----V~~~d~~~~~~~a~~~g~~~~-~l~e~~~--~aDvV~l~~P~~~~t~~~i~~~~~ 219 (529)
T 1ygy_A 148 VG-LGRIGQLVAQRIAAFGAY----VVAYDPYVSPARAAQLGIELL-SLDDLLA--RADFISVHLPKTPETAGLIDKEAL 219 (529)
T ss_dssp EC-CSHHHHHHHHHHHTTTCE----EEEECTTSCHHHHHHHTCEEC-CHHHHHH--HCSEEEECCCCSTTTTTCBCHHHH
T ss_pred Ee-eCHHHHHHHHHHHhCCCE----EEEECCCCChhHHHhcCcEEc-CHHHHHh--cCCEEEECCCCchHHHHHhCHHHH
Confidence 45 356888888899888875 77788864111 12365544 8888766 789999999987 66666655 33
Q ss_pred H-cCCcEEEEEcCC-CChHHHHHHHHHHhcCCCCce
Q psy3769 400 E-SELELVICITEG-IPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 400 ~-~gv~~~vi~s~G-~~e~~~~~l~~~a~~~~~gi~ 433 (974)
+ ..-.. +++.-+ ....++.+|.+..+ +.++.
T Consensus 220 ~~~k~g~-ilin~arg~iv~~~aL~~al~--~g~i~ 252 (529)
T 1ygy_A 220 AKTKPGV-IIVNAARGGLVDEAALADAIT--GGHVR 252 (529)
T ss_dssp TTSCTTE-EEEECSCTTSBCHHHHHHHHH--TSSEE
T ss_pred hCCCCCC-EEEECCCCchhhHHHHHHHHH--cCCcc
Confidence 2 23334 444322 11223455666666 55554
No 354
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.71 E-value=1.7e+02 Score=27.41 Aligned_cols=84 Identities=19% Similarity=0.132 Sum_probs=45.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-Ccc---ccccccc-cc------hhhh-cccCCCcEEEEEecchh
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQK---FEEIPIF-DT------VKNA-KNETGATVSVIYVPAIF 390 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~---i~G~~~y-~s------l~di-p~~~~vDlavi~vp~~~ 390 (974)
|+| .+..|..+.+.|.+.|++ |..+.++.. -+. -.|...+ .+ +.+. .+ ..|++++++|...
T Consensus 24 IiG-~G~iG~~la~~L~~~g~~----V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 24 IFG-CGRLGSLIANLASSSGHS----VVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGME--KADMVFAFTNDDS 96 (155)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSSCHH
T ss_pred EEC-CCHHHHHHHHHHHhCCCe----EEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeCCcH
Confidence 356 356777777777777764 444433220 011 1133222 12 2222 12 6899999999877
Q ss_pred HHHHHHHHHH--cCCcEEEEEcCCC
Q psy3769 391 ATSAIWEAIE--SELELVICITEGI 413 (974)
Q Consensus 391 v~~~v~e~~~--~gv~~~vi~s~G~ 413 (974)
....+.++++ .+...++..+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 6666555554 4666666665553
No 355
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=29.52 E-value=7.8 Score=43.01 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=59.9
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecch-hHHHHHH-HHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW-EAI 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~-e~~ 399 (974)
+| .|..|..+.+.+..+|++ |...+|....+ .-.|...+.|++++-+ ..|++++++|.. .+...+. +..
T Consensus 166 IG-lG~IG~~vA~~l~~~G~~----V~~~d~~~~~~~~~~~g~~~~~~l~ell~--~aDiV~l~~Plt~~t~~li~~~~l 238 (352)
T 3gg9_A 166 FG-YGKIGQLVAGYGRAFGMN----VLVWGRENSKERARADGFAVAESKDALFE--QSDVLSVHLRLNDETRSIITVADL 238 (352)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEECSHHHHHHHHHTTCEECSSHHHHHH--HCSEEEECCCCSTTTTTCBCHHHH
T ss_pred Ee-ECHHHHHHHHHHHhCCCE----EEEECCCCCHHHHHhcCceEeCCHHHHHh--hCCEEEEeccCcHHHHHhhCHHHH
Confidence 45 356888889999988876 77777763001 1247776679999876 789999999954 2333332 222
Q ss_pred H-cCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 400 E-SELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 400 ~-~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
+ ..-.+++|-.+--+-.+++.|.+..+ +.++.
T Consensus 239 ~~mk~gailIN~aRg~~vd~~aL~~aL~--~g~i~ 271 (352)
T 3gg9_A 239 TRMKPTALFVNTSRAELVEENGMVTALN--RGRPG 271 (352)
T ss_dssp TTSCTTCEEEECSCGGGBCTTHHHHHHH--HTSSS
T ss_pred hhCCCCcEEEECCCchhhcHHHHHHHHH--hCCcc
Confidence 2 23344444333222223445566666 55544
No 356
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=29.39 E-value=1.4e+02 Score=31.28 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=76.4
Q ss_pred CcEEEEEecchhHHHHHHHHH-HcCCcEEEEEcCCC--ChHHH--HHHHHHHhcC--CCCceEEccCCccccccCccc--
Q psy3769 379 ATVSVIYVPAIFATSAIWEAI-ESELELVICITEGI--PVRDM--LILKNKMKKN--NSKTLLLGPNCPGLIVPEEIK-- 449 (974)
Q Consensus 379 vDlavi~vp~~~v~~~v~e~~-~~gv~~~vi~s~G~--~e~~~--~~l~~~a~~~--~~gi~viGPnc~G~~~~~~~~-- 449 (974)
.|..|..=..+....+.+.+. +.|-+.+.++++.- ....+ +-..+..++. ..++.++.+...+-.++....
T Consensus 98 ~~~~V~~D~~~~g~~a~~~L~~~~G~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (313)
T 3m9w_A 98 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 177 (313)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECGGGCHHHHHHH
T ss_pred ceEEEecCHHHHHHHHHHHHHHhCCCCcEEEEECCCCCccHHHHHHHHHHHHHhhccCCCEEEEeeccCCCcCHHHHHHH
Confidence 443444445566777888888 78999887776432 11111 1123333300 236777644321111211111
Q ss_pred -cccCCCCCCCCCCEEEEeCChhhHHHHHHHHHHcCCc-eEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccC
Q psy3769 450 -IGIMPGNIHKKGRIGVVSRSGTLTYEVVCQLTELGFG-QSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIG 526 (974)
Q Consensus 450 -~~~~~~~~~~~G~va~vSQSG~~~~~~~~~~~~~g~g-~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~ 526 (974)
...+. ...|..-|+++.+..++..++..++++|+. =-.+++.++. .+..+++...|....|..-.+.+
T Consensus 178 ~~~~l~--~~~~~~~ai~~~~d~~a~g~~~al~~~G~~~di~vig~d~~-------~~~~~~~~~~p~lttv~~~~~~~ 247 (313)
T 3m9w_A 178 MENALT--ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD-------LAGIKRIAAGTQTMTVYKPITLL 247 (313)
T ss_dssp HHHHHH--HTTTCCCEEEESSHHHHHHHHHHHHTTTCTTTSEECCCSCC-------HHHHHHHHHTSSCCEEECCHHHH
T ss_pred HHHHHH--hCCCCeeEEEECCCchHHHHHHHHHHcCCCCCcEEEecCCC-------HHHHHHHHcCCeEEEEecCHHHH
Confidence 00110 011456799999999999999989888875 1134444443 35556777778776666555544
No 357
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=29.31 E-value=81 Score=32.60 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=48.5
Q ss_pred CCCCEEEEeCChhhHHHHHHHHHHcCCceEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHH
Q psy3769 459 KKGRIGVVSRSGTLTYEVVCQLTELGFGQSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIK 538 (974)
Q Consensus 459 ~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~ 538 (974)
.+++|++|.-+|++...+.+. +.+.++.+.+ ++.|+|++|+.+-|..-..+.+..+
T Consensus 6 ~~~~V~vI~i~g~I~~~~~~~-----------------------l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~ 61 (230)
T 3viv_A 6 AKNIVYVAQIKGQITSYTYDQ-----------------------FDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQ 61 (230)
T ss_dssp CCCEEEEEEEESCBCHHHHHH-----------------------HHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHH
T ss_pred CCCeEEEEEEeCEECHHHHHH-----------------------HHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHH
Confidence 346788888887776554322 3355566655 4699999999987654455556555
Q ss_pred h--cCCCCEEEEe---cccC
Q psy3769 539 K--NMKKPVIGFI---AGIT 553 (974)
Q Consensus 539 ~--~~~KPVv~lk---~Grs 553 (974)
. ...|||+++. .|..
T Consensus 62 ~i~~~~~PVia~v~p~~G~A 81 (230)
T 3viv_A 62 RIQQSKIPVIIYVYPPGASA 81 (230)
T ss_dssp HHHTCSSCEEEEECSTTCEE
T ss_pred HHHhCCCCEEEEEecCCCEE
Confidence 5 6789999998 5654
No 358
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=29.03 E-value=67 Score=32.37 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=53.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcc--cCCCcEEEEEecchhH-HHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKN--ETGATVSVIYVPAIFA-TSAIWEAI 399 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~--~~~vDlavi~vp~~~v-~~~v~e~~ 399 (974)
|+|. +..|..+++.+.+.+|+ .+..+..+....++.|+|++.+.+++++ +..+|.+++++|.... ....+.+.
T Consensus 17 IiGA-Gg~g~~v~~~l~~~~~~---~vgfiDd~~~~~~~~g~~Vlg~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~l~ 92 (220)
T 4ea9_A 17 IIGG-GGHAKVVIESLRACGET---VAAIVDADPTRRAVLGVPVVGDDLALPMLREQGLSRLFVAIGDNRLRQKLGRKAR 92 (220)
T ss_dssp EECC-SHHHHHHHHHHHHTTCC---EEEEECSCC---CBTTBCEEESGGGHHHHHHTTCCEEEECCCCHHHHHHHHHHHH
T ss_pred EEcC-CHHHHHHHHHHHhCCCE---EEEEEeCCcccCcCCCeeEECCHHHHHHhhcccccEEEEecCCHHHHHHHHHHHH
Confidence 4663 23566677777777787 5666655432246889999988776542 1246778888886544 45667777
Q ss_pred HcCCcEEEEEc
Q psy3769 400 ESELELVICIT 410 (974)
Q Consensus 400 ~~gv~~~vi~s 410 (974)
+.|++...++.
T Consensus 93 ~~g~~~~~~i~ 103 (220)
T 4ea9_A 93 DHGFSLVNAIH 103 (220)
T ss_dssp HTTCEECCEEC
T ss_pred hcCCCcCCcCC
Confidence 78877654444
No 359
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=28.44 E-value=19 Score=39.01 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=54.5
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCc--cccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQ--KFEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEAI 399 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~--~i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~~ 399 (974)
+| .|..|..+.+.+...|++ |+.++|..... .-.|... .+++++.+ ..|++++++|... +...+ ++..
T Consensus 148 iG-~G~IG~~~A~~l~~~G~~----V~~~d~~~~~~~~~~~g~~~-~~l~ell~--~aDvV~l~~p~~~~t~~li~~~~l 219 (307)
T 1wwk_A 148 IG-FGRIGYQVAKIANALGMN----ILLYDPYPNEERAKEVNGKF-VDLETLLK--ESDVVTIHVPLVESTYHLINEERL 219 (307)
T ss_dssp EC-CSHHHHHHHHHHHHTTCE----EEEECSSCCHHHHHHTTCEE-CCHHHHHH--HCSEEEECCCCSTTTTTCBCHHHH
T ss_pred Ec-cCHHHHHHHHHHHHCCCE----EEEECCCCChhhHhhcCccc-cCHHHHHh--hCCEEEEecCCChHHhhhcCHHHH
Confidence 45 256888888999888875 77888765111 1235543 48888766 7899999999643 33333 1222
Q ss_pred -HcCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 400 -ESELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 400 -~~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
...-.++++-.+.-+-.++..|.+..+
T Consensus 220 ~~mk~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 220 KLMKKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hcCCCCeEEEECCCCcccCHHHHHHHHH
Confidence 223334334333222223455666666
No 360
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=28.42 E-value=76 Score=36.43 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=35.9
Q ss_pred cccccchhhhcccCCCcEEEEEecch---------------hHHHHHHHHHHc-CCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 364 IPIFDTVKNAKNETGATVSVIYVPAI---------------FATSAIWEAIES-ELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 364 ~~~y~sl~dip~~~~vDlavi~vp~~---------------~v~~~v~e~~~~-gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
+.+..++++..+ ..|++++++|.. .+.+++++..+. .-..+|+..+..+....+++.+..+
T Consensus 74 l~~t~~~~~~~~--~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~ 150 (481)
T 2o3j_A 74 LFFSSDIPKAIA--EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILR 150 (481)
T ss_dssp EEEESCHHHHHH--HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEECCHHHHhh--cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHH
Confidence 344445555444 689999998753 367777666552 3345666655554333344556555
No 361
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=28.30 E-value=47 Score=40.92 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=52.9
Q ss_pred cCCeEEEEecCcchhhHHHHHHHhcCCCCceeeecCCCC-CHHHHHHHHHHHhhcCCeEEEE
Q psy3769 260 LNGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDIGGGA-TIKTITEAFKIMMQQNNLKTIL 320 (974)
Q Consensus 260 l~G~Ig~~~nGaGlam~t~D~i~~~gg~panfld~GG~a-~~~~v~~a~~~il~~~~~~~i~ 320 (974)
..|+||++.-.++|+...+|.+...|---..|.-+||.+ .--.+.+.++.+..||++++|+
T Consensus 653 ~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Iv 714 (829)
T 3pff_A 653 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIV 714 (829)
T ss_dssp SCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEE
T ss_pred CCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEE
Confidence 479999999999999999999999987777899999984 2245778899999999999985
No 362
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=27.52 E-value=10 Score=40.77 Aligned_cols=106 Identities=15% Similarity=0.282 Sum_probs=61.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----ccccc--ccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPI--FDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~--y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .+..|..+.+.+...|++ |+.++|.. +.. .|..+ +.+++++.. ..|++++++|...+.+..
T Consensus 162 IiG-~G~iG~~~a~~l~~~G~~----V~~~d~~~--~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~~ 232 (300)
T 2rir_A 162 VLG-LGRTGMTIARTFAALGAN----VKVGARSS--AHLARITEMGLVPFHTDELKEHVK--DIDICINTIPSMILNQTV 232 (300)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEEESSH--HHHHHHHHTTCEEEEGGGHHHHST--TCSEEEECCSSCCBCHHH
T ss_pred EEc-ccHHHHHHHHHHHHCCCE----EEEEECCH--HHHHHHHHCCCeEEchhhHHHHhh--CCCEEEECCChhhhCHHH
Confidence 356 367888888999888875 77777764 221 25443 467777765 799999999986543322
Q ss_pred HHHHHcCCcEEEE-EcCCCChHHHHHHHHHHhcCCCCceEE-ccCCcccccc
Q psy3769 396 WEAIESELELVIC-ITEGIPVRDMLILKNKMKKNNSKTLLL-GPNCPGLIVP 445 (974)
Q Consensus 396 ~e~~~~gv~~~vi-~s~G~~e~~~~~l~~~a~~~~~gi~vi-GPnc~G~~~~ 445 (974)
-+..+.| .+++ ++.|-.+.+ + +.++ +.|++++ -||..|.+.+
T Consensus 233 ~~~mk~g--~~lin~a~g~~~~~---~-~~a~--~~G~~~i~~pg~~g~v~~ 276 (300)
T 2rir_A 233 LSSMTPK--TLILDLASRPGGTD---F-KYAE--KQGIKALLAPGLPGIVAP 276 (300)
T ss_dssp HTTSCTT--CEEEECSSTTCSBC---H-HHHH--HHTCEEEECCCHHHHHCH
T ss_pred HHhCCCC--CEEEEEeCCCCCcC---H-HHHH--HCCCEEEECCCCCCcHHH
Confidence 1222223 3233 222211111 2 4455 5688865 5776665544
No 363
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=27.27 E-value=42 Score=39.84 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=32.2
Q ss_pred HHHHHHHhhhCCCccEEEEEEccCC-CchHHHHHHHHh-----cCCCCEEEEe
Q psy3769 503 YIDILKLFNEDQNTDAVIMIGEIGG-LDEIYAANWIKK-----NMKKPVIGFI 549 (974)
Q Consensus 503 ~~d~l~~l~~Dp~t~~I~ly~E~~g-~~~~~~~~f~~~-----~~~KPVv~lk 549 (974)
+.+-|+++.+||+++.|++|+.+.| ..-..+.+..++ ..+|||+++-
T Consensus 75 i~~~L~~a~~d~~ik~I~L~inspGgG~v~~~~~I~~~i~~~k~~gkpvva~~ 127 (593)
T 3bf0_A 75 IVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVG 127 (593)
T ss_dssp HHHHHHHHHHCTTCCCEEEECTEEEECCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeCCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3445567778999999999999876 333333333332 4579999983
No 364
>1rzh_H Reaction center protein H chain; bacterial photosynthesis, proton TR pathway, revertant, integral membrane protein, photosynthes; HET: BCL BPH U10 HTO SPO LDA CDL; 1.80A {Rhodobacter sphaeroides} SCOP: b.41.1.1 f.23.10.1 PDB: 1e14_H* 1f6n_H* 1fnp_H* 1fnq_H* 1jgw_H* 1jgx_H* 1jgy_H* 1jgz_H* 1jh0_H* 1k6l_H* 1k6n_H* 1kby_H* 1l9b_H* 1l9j_H* 1m3x_H* 1mps_H* 1pcr_H* 1e6d_H* 1rg5_H* 1rgn_H* ...
Probab=27.16 E-value=40 Score=35.43 Aligned_cols=24 Identities=25% Similarity=0.191 Sum_probs=21.6
Q ss_pred ccccCeEEEecCCcEeEEEEEeec
Q psy3769 942 FNLIDCIVENIHGKLLGTVTEIIQ 965 (974)
Q Consensus 942 ~DLiG~~V~d~~g~~lG~V~~v~~ 965 (974)
.|+.|+.|+..+|+.+|+|+|++=
T Consensus 146 ~d~~G~~Vyg~DGe~iGsV~Dl~V 169 (260)
T 1rzh_H 146 KNPIGLPVRGCDLEIAGKVVDIWV 169 (260)
T ss_dssp CCCTTCEEEETTSCEEEEEEEEEE
T ss_pred CCCCCCEeEcCCCCeeEEEEEEEE
Confidence 478999999999999999999863
No 365
>2wjn_H Reaction center protein H chain; bacteriochlorophyll, lipidic-sponge phase, photosynthesis, R center, electron transport, cell membrane; HET: HEM FME BCB BPB MPG MQ7 NS5; 1.86A {Rhodopseudomonas viridis} PDB: 1prc_H* 1r2c_H* 1vrn_H* 1dxr_H* 2jbl_H* 2prc_H* 2i5n_H* 2wjm_H* 2x5u_H* 2x5v_H* 3d38_H* 3prc_H* 3t6e_H* 4ac5_H* 5prc_H* 6prc_H* 7prc_H* 3t6d_H* 3g7f_H*
Probab=27.05 E-value=37 Score=35.65 Aligned_cols=24 Identities=25% Similarity=0.176 Sum_probs=21.7
Q ss_pred ccccCeEEEecCCcEeEEEEEeec
Q psy3769 942 FNLIDCIVENIHGKLLGTVTEIIQ 965 (974)
Q Consensus 942 ~DLiG~~V~d~~g~~lG~V~~v~~ 965 (974)
.|+.|+.|+..+|+.+|+|+|++=
T Consensus 150 ~D~~G~~Vyg~DGe~iGsV~Dl~V 173 (258)
T 2wjn_H 150 VDPRGLPVVAADGVEAGTVTDLWV 173 (258)
T ss_dssp CCCTTCEEECTTSCEEEEEEEEEE
T ss_pred CCCCCCEeEcCCCCeeEEEEEEEE
Confidence 589999999999999999999864
No 366
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=26.99 E-value=2e+02 Score=28.62 Aligned_cols=85 Identities=18% Similarity=0.147 Sum_probs=51.1
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCC-Cccc--c-------ccccccchhhhcccCCCcEEEEEecch---
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKN-GQKF--E-------EIPIFDTVKNAKNETGATVSVIYVPAI--- 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~-g~~i--~-------G~~~y~sl~dip~~~~vDlavi~vp~~--- 389 (974)
|.|.++..|..+.+.|.+.|+.. .|+.+..+.. .++. . .+.-..++.++.+ .+|.++-+....
T Consensus 23 VtGasg~iG~~l~~~L~~~G~~~--~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~~~ 98 (242)
T 2bka_A 23 ILGASGETGRVLLKEILEQGLFS--KVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGTTRGK 98 (242)
T ss_dssp EECTTSHHHHHHHHHHHHHTCCS--EEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCCCHHH
T ss_pred EECCCcHHHHHHHHHHHcCCCCC--EEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc--CCCEEEECCCccccc
Confidence 47888889999999999989821 2444432210 1110 1 1222234445444 789888776432
Q ss_pred ------------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 ------------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 ------------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+..+++.|.+.+++.+|.+|+
T Consensus 99 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 99 AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 2345666777788888777776
No 367
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=26.85 E-value=84 Score=35.03 Aligned_cols=43 Identities=12% Similarity=0.011 Sum_probs=33.4
Q ss_pred cchhhhccc-CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 368 DTVKNAKNE-TGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 368 ~sl~dip~~-~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+.+++|-. ..+|+++-++|.....+.....+++|+|.+ +++.
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkV-VIs~ 123 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKV-LITA 123 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEE-EESS
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEE-EEcC
Confidence 355666511 269999999999999999999999999984 5554
No 368
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=26.81 E-value=59 Score=35.61 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=56.0
Q ss_pred HHHHHHhhcCCeEEEEEccccccCcccccchhhhhc----cC-CCCceEEEEecCCCCCccccc--ccccc--chhhhcc
Q psy3769 305 EAFKIMMQQNNLKTILVNIFGITGKTGRFHTNLCLN----YG-NGKKAFVAGVNPKKNGQKFEE--IPIFD--TVKNAKN 375 (974)
Q Consensus 305 ~a~~~il~~~~~~~i~vni~G~~~k~G~~v~~~l~~----~g-~~g~~~V~pVnP~~~g~~i~G--~~~y~--sl~dip~ 375 (974)
+.+++++.+|++..+.||=.. +...+.++++ +| |.+ .+...+++- .+.| ++++. +.+++|-
T Consensus 15 ~l~R~l~~~~~veivain~~~-----~~~~~~~ll~~ds~~G~~~~--~v~~~~~~l---~v~g~~i~v~~~~dp~~i~w 84 (334)
T 3cmc_O 15 NVFRAALKNPDIEVVAVNDLT-----DANTLAHLLKYDSVHGRLDA--EVSVNGNNL---VVNGKEIIVKAERDPENLAW 84 (334)
T ss_dssp HHHHHHTTCTTEEEEEEECSS-----CHHHHHHHHHEETTTEECSS--CEEEETTEE---EETTEEEEEECCSSGGGCCT
T ss_pred HHHHHHhCCCCeEEEEEeCCC-----CHHHHHHHhccCCcCCCcCc--eEEEccCcE---EECCEEEEEEecCChhhcCc
Confidence 456777888998887666542 1111122221 12 333 333322221 1122 34442 4555641
Q ss_pred -cCCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 376 -ETGATVSVIYVPAIFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 376 -~~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
+..+|+++.++|.....+......++|+|.+ +++.
T Consensus 85 ~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~v-VId~ 120 (334)
T 3cmc_O 85 GEIGVDIVVESTGRFTKREDAAKHLEAGAKKV-IISA 120 (334)
T ss_dssp GGGTCCEEEECSSSCCBHHHHTHHHHTTCSEE-EESS
T ss_pred ccCccCEEEECCCchhhHHHHHHHHHCCCCEE-EEeC
Confidence 1269999999999999999999999999984 5553
No 369
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=26.80 E-value=63 Score=34.77 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=19.3
Q ss_pred cccccCcccccchhhhhccCCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNG 344 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~ 344 (974)
|.|.++..|..+.+.|++.|++
T Consensus 32 VtGatG~iG~~l~~~L~~~g~~ 53 (352)
T 1sb8_A 32 ITGVAGFIGSNLLETLLKLDQK 53 (352)
T ss_dssp EETTTSHHHHHHHHHHHHTTCE
T ss_pred EECCCcHHHHHHHHHHHHCCCE
Confidence 5788889999999999988876
No 370
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=26.70 E-value=25 Score=38.44 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=55.0
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcc--ccccccccchhhhcccCCCcEEEEEecchh-HHHHH-HHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK--FEEIPIFDTVKNAKNETGATVSVIYVPAIF-ATSAI-WEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~--i~G~~~y~sl~dip~~~~vDlavi~vp~~~-v~~~v-~e~ 398 (974)
|+| .|..|..+.+.+...|++ |+.+++....+. -.|.. +.+++++.. ..|++++++|... +...+ ++.
T Consensus 155 IIG-~G~iG~~iA~~l~~~G~~----V~~~d~~~~~~~~~~~g~~-~~~l~~~l~--~aDvVil~vp~~~~t~~~i~~~~ 226 (334)
T 2dbq_A 155 IIG-LGRIGQAIAKRAKGFNMR----ILYYSRTRKEEVERELNAE-FKPLEDLLR--ESDFVVLAVPLTRETYHLINEER 226 (334)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEECSSCCHHHHHHHCCE-ECCHHHHHH--HCSEEEECCCCCTTTTTCBCHHH
T ss_pred EEc-cCHHHHHHHHHHHhCCCE----EEEECCCcchhhHhhcCcc-cCCHHHHHh--hCCEEEECCCCChHHHHhhCHHH
Confidence 456 367888888899888875 777887651111 12444 458888765 7899999999865 33333 222
Q ss_pred HH-cCCcEEEEEcCCCChHHHHHHHHHHh
Q psy3769 399 IE-SELELVICITEGIPVRDMLILKNKMK 426 (974)
Q Consensus 399 ~~-~gv~~~vi~s~G~~e~~~~~l~~~a~ 426 (974)
.+ ..-..+++-.+-....++.+|.+..+
T Consensus 227 ~~~mk~~ailIn~srg~~v~~~aL~~aL~ 255 (334)
T 2dbq_A 227 LKLMKKTAILINIARGKVVDTNALVKALK 255 (334)
T ss_dssp HHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 22 22233333332222223445566665
No 371
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=26.66 E-value=56 Score=34.46 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=27.6
Q ss_pred CCcEEEEEecchhHHHHHHHHHHc-CC-cEEEEEcCCCCh
Q psy3769 378 GATVSVIYVPAIFATSAIWEAIES-EL-ELVICITEGIPV 415 (974)
Q Consensus 378 ~vDlavi~vp~~~v~~~v~e~~~~-gv-~~~vi~s~G~~e 415 (974)
..|++++++|+..+.+++++.... +- ..++.++.|+..
T Consensus 74 ~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 74 QVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp CCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 689999999999999888877543 21 234555677763
No 372
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=26.56 E-value=55 Score=29.76 Aligned_cols=35 Identities=9% Similarity=-0.009 Sum_probs=24.8
Q ss_pred CCcEEEEEecch--hHHHHHHHHHHcCCcEEEEEcCC
Q psy3769 378 GATVSVIYVPAI--FATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 378 ~vDlavi~vp~~--~v~~~v~e~~~~gv~~~vi~s~G 412 (974)
..|++++++|.. ....+.+.|.+.|++.++..+.+
T Consensus 70 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 70 NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 689999999864 33456666777888876655554
No 373
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=26.51 E-value=50 Score=36.07 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=52.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEe-cCCCCCccc--cc--cccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGV-NPKKNGQKF--EE--IPIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pV-nP~~~g~~i--~G--~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
|.|.+|..|..+++.|.+.+++-. .++.+ ..+..|+.+ .| +++.. . + |+...+|+++.++|.....+....
T Consensus 5 I~GAtG~iG~~llr~L~~~~~~~~-~l~~~~s~~~~g~~l~~~g~~i~v~~-~-~-~~~~~~DvV~~a~g~~~s~~~a~~ 80 (331)
T 2yv3_A 5 VVGATGAVGREILKVLEARNFPLS-ELRLYASPRSAGVRLAFRGEEIPVEP-L-P-EGPLPVDLVLASAGGGISRAKALV 80 (331)
T ss_dssp EETTTSHHHHHHHHHHHHTTCCCS-CCEEEECGGGSSCEEEETTEEEEEEE-C-C-SSCCCCSEEEECSHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHhCCCCcE-EEEEeeccccCCCEEEEcCceEEEEe-C-C-hhhcCCCEEEECCCccchHHHHHH
Confidence 568888889999988885555421 23322 212112221 12 12221 1 1 111158999999999999999999
Q ss_pred HHHcCCcEEEEEcCCC
Q psy3769 398 AIESELELVICITEGI 413 (974)
Q Consensus 398 ~~~~gv~~~vi~s~G~ 413 (974)
+.++|++ +|-.|+.|
T Consensus 81 ~~~~G~~-vId~s~~~ 95 (331)
T 2yv3_A 81 WAEGGAL-VVDNSSAW 95 (331)
T ss_dssp HHHTTCE-EEECSSSS
T ss_pred HHHCCCE-EEECCCcc
Confidence 9999987 46666655
No 374
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=26.46 E-value=2.3e+02 Score=31.18 Aligned_cols=85 Identities=11% Similarity=0.118 Sum_probs=51.7
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc---------------ccccc-ccchh------hhcccCCCc
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF---------------EEIPI-FDTVK------NAKNETGAT 380 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i---------------~G~~~-y~sl~------dip~~~~vD 380 (974)
|.|.++..|..+.+.|++.|+. .|+.+.... ... .++.. .-++. .+.....+|
T Consensus 40 VTGatG~IG~~l~~~L~~~g~~---~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 114 (399)
T 3nzo_A 40 VLGGAGSIGQAVTKEIFKRNPQ---KLHVVDISE--NNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYD 114 (399)
T ss_dssp EETTTSHHHHHHHHHHHTTCCS---EEEEECSCH--HHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCS
T ss_pred EEcCChHHHHHHHHHHHHCCCC---EEEEEECCc--chHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCC
Confidence 4698899999999999998843 466665432 110 11111 11222 222224789
Q ss_pred EEEEEecch-----h---------------HHHHHHHHHHcCCcEEEEEcCC
Q psy3769 381 VSVIYVPAI-----F---------------ATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 381 lavi~vp~~-----~---------------v~~~v~e~~~~gv~~~vi~s~G 412 (974)
.++-+.... . +..+++.|.+.|++.+|.+|+.
T Consensus 115 ~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~ 166 (399)
T 3nzo_A 115 YVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD 166 (399)
T ss_dssp EEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 887654321 1 2357888888999988888874
No 375
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=26.14 E-value=63 Score=34.36 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=19.2
Q ss_pred cccccCcccccchhhhhccCCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNG 344 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~ 344 (974)
|.|.++..|..+.+.|++.|++
T Consensus 18 VtGatG~iG~~l~~~L~~~g~~ 39 (342)
T 2x4g_A 18 VLGATGLLGHHAARAIRAAGHD 39 (342)
T ss_dssp EESTTSHHHHHHHHHHHHTTCE
T ss_pred EECCCcHHHHHHHHHHHHCCCE
Confidence 5788888999999999988876
No 376
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=26.12 E-value=25 Score=38.47 Aligned_cols=97 Identities=8% Similarity=-0.017 Sum_probs=57.8
Q ss_pred CcccccchhhhhccCCCCceEEEEecCCCCCcc---ccccccccchhhhcccCCCcEEEEEecch-hHHHHHH-HHHH-c
Q psy3769 328 GKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQK---FEEIPIFDTVKNAKNETGATVSVIYVPAI-FATSAIW-EAIE-S 401 (974)
Q Consensus 328 ~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~-~v~~~v~-e~~~-~ 401 (974)
|..|..+.+.+...|++ |+..+|.....+ -.|.. |.+++++-+ ..|++++++|.. .+...+. +..+ .
T Consensus 154 G~IG~~vA~~l~~~G~~----V~~~d~~~~~~~~~~~~g~~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~~~~l~~m 226 (330)
T 4e5n_A 154 GAIGLAMADRLQGWGAT----LQYHEAKALDTQTEQRLGLR-QVACSELFA--SSDFILLALPLNADTLHLVNAELLALV 226 (330)
T ss_dssp SHHHHHHHHHTTTSCCE----EEEECSSCCCHHHHHHHTEE-ECCHHHHHH--HCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CHHHHHHHHHHHHCCCE----EEEECCCCCcHhHHHhcCce-eCCHHHHHh--hCCEEEEcCCCCHHHHHHhCHHHHhhC
Confidence 56888888999888876 777777631111 23553 458999876 789999999953 3333332 3333 2
Q ss_pred CCcEEEEEcCCCChHHHHHHHHHHhcCCCCce
Q psy3769 402 ELELVICITEGIPVRDMLILKNKMKKNNSKTL 433 (974)
Q Consensus 402 gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~ 433 (974)
.-.++++-.+--+-.++..|.+..+ +.++.
T Consensus 227 k~gailIN~arg~~vd~~aL~~aL~--~g~i~ 256 (330)
T 4e5n_A 227 RPGALLVNPCRGSVVDEAAVLAALE--RGQLG 256 (330)
T ss_dssp CTTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred CCCcEEEECCCCchhCHHHHHHHHH--hCCcc
Confidence 3344433333222234555667776 66555
No 377
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=25.78 E-value=1.1e+02 Score=31.97 Aligned_cols=84 Identities=12% Similarity=0.117 Sum_probs=47.9
Q ss_pred cccccCcccccchhhhhccC-CCCceEEEEecCCCCCc---cccccc------cccchhhhccc---CCCcEEEEEecch
Q psy3769 323 IFGITGKTGRFHTNLCLNYG-NGKKAFVAGVNPKKNGQ---KFEEIP------IFDTVKNAKNE---TGATVSVIYVPAI 389 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g-~~g~~~V~pVnP~~~g~---~i~G~~------~y~sl~dip~~---~~vDlavi~vp~~ 389 (974)
|.|.++..|..+.+.|++.| ++ |+.+....... ...++. -..+++++.+. ..+|.++-+....
T Consensus 4 VtGatG~iG~~l~~~L~~~g~~~----V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 79 (310)
T 1eq2_A 4 VTGGAGFIGSNIVKALNDKGITD----ILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (310)
T ss_dssp EETTTSHHHHHHHHHHHTTTCCC----EEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred EEcCccHHHHHHHHHHHHCCCcE----EEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence 46888889999999999888 65 55444332111 111111 11233344331 1489887664321
Q ss_pred ----------------hHHHHHHHHHHcCCcEEEEEcC
Q psy3769 390 ----------------FATSAIWEAIESELELVICITE 411 (974)
Q Consensus 390 ----------------~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
.+..+++.|.+.|+ .+|.+|+
T Consensus 80 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 80 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 13457777877888 5566664
No 378
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=25.72 E-value=15 Score=39.26 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=62.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccc-----ccccc--ccchhhhcccCCCcEEEEEecchhHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF-----EEIPI--FDTVKNAKNETGATVSVIYVPAIFATSAI 395 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i-----~G~~~--y~sl~dip~~~~vDlavi~vp~~~v~~~v 395 (974)
|+| .|..|..+.+.+...|++ |+.++|.. +.. .|... +.+++++.. ..|++++++|...+.+..
T Consensus 160 IiG-~G~iG~~~a~~l~~~G~~----V~~~dr~~--~~~~~~~~~g~~~~~~~~l~~~l~--~aDvVi~~~p~~~i~~~~ 230 (293)
T 3d4o_A 160 VLG-LGRVGMSVARKFAALGAK----VKVGARES--DLLARIAEMGMEPFHISKAAQELR--DVDVCINTIPALVVTANV 230 (293)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCE----EEEEESSH--HHHHHHHHTTSEEEEGGGHHHHTT--TCSEEEECCSSCCBCHHH
T ss_pred EEe-eCHHHHHHHHHHHhCCCE----EEEEECCH--HHHHHHHHCCCeecChhhHHHHhc--CCCEEEECCChHHhCHHH
Confidence 356 367888888899888875 77777764 221 24443 356777655 799999999986543322
Q ss_pred HHHHHcCCcEEEEEcC-CCChHHHHHHHHHHhcCCCCceEE-ccCCccccccC
Q psy3769 396 WEAIESELELVICITE-GIPVRDMLILKNKMKKNNSKTLLL-GPNCPGLIVPE 446 (974)
Q Consensus 396 ~e~~~~gv~~~vi~s~-G~~e~~~~~l~~~a~~~~~gi~vi-GPnc~G~~~~~ 446 (974)
-++.+.| .+++-.+ |-.+.+ + +.++ +.|++++ -||..|.+.|.
T Consensus 231 l~~mk~~--~~lin~ar~~~~~~---~-~~a~--~~Gv~~~~~~~l~~~v~p~ 275 (293)
T 3d4o_A 231 LAEMPSH--TFVIDLASKPGGTD---F-RYAE--KRGIKALLVPGLPGIVAPK 275 (293)
T ss_dssp HHHSCTT--CEEEECSSTTCSBC---H-HHHH--HHTCEEEECCCHHHHHCHH
T ss_pred HHhcCCC--CEEEEecCCCCCCC---H-HHHH--HCCCEEEECCCCCcccCHH
Confidence 2222333 3333332 322222 2 4455 5688876 57766666453
No 379
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=25.65 E-value=52 Score=34.10 Aligned_cols=85 Identities=12% Similarity=0.164 Sum_probs=50.8
Q ss_pred cccccCcccccchhhhhcc--CCCCceEEEEecCCCCCccc--cccc-------cccchhhhcccCCCcEEEEEecc---
Q psy3769 323 IFGITGKTGRFHTNLCLNY--GNGKKAFVAGVNPKKNGQKF--EEIP-------IFDTVKNAKNETGATVSVIYVPA--- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~--g~~g~~~V~pVnP~~~g~~i--~G~~-------~y~sl~dip~~~~vDlavi~vp~--- 388 (974)
|.|.++..|..+.+.|++. |++ ++.........++. .++. -..++.++.+ .+|.++-+...
T Consensus 5 VtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~ 79 (287)
T 2jl1_A 5 VTGATGQLGGLVIQHLLKKVPASQ---IIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPHYD 79 (287)
T ss_dssp ETTTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCCSC
T ss_pred EEcCCchHHHHHHHHHHHhCCCCe---EEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCCcC
Confidence 5788888999999999987 776 33333221101111 1221 1234445544 68988766532
Q ss_pred -----hhHHHHHHHHHHcCCcEEEEEcCC
Q psy3769 389 -----IFATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 389 -----~~v~~~v~e~~~~gv~~~vi~s~G 412 (974)
.....+++.|.+.|++.+|.+|+.
T Consensus 80 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 80 NTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 234567788888899887777753
No 380
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.44 E-value=51 Score=34.34 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=49.4
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcccc-------ccccccchhhhcccCCCcEEEEEecc-------
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFE-------EIPIFDTVKNAKNETGATVSVIYVPA------- 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~-------G~~~y~sl~dip~~~~vDlavi~vp~------- 388 (974)
|.| ++..|..+.+.|++.|++ |+.+..+.. ..-. .+.-..++.++.+ ..+|.++-+...
T Consensus 8 VtG-aG~iG~~l~~~L~~~g~~----V~~~~r~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vih~a~~~~~~~~~ 80 (286)
T 3gpi_A 8 IAG-CGDLGLELARRLTAQGHE----VTGLRRSAQ-PMPAGVQTLIADVTRPDTLASIVH-LRPEILVYCVAASEYSDEH 80 (286)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCC----EEEEECTTS-CCCTTCCEEECCTTCGGGCTTGGG-GCCSEEEECHHHHHHC---
T ss_pred EEC-CCHHHHHHHHHHHHCCCE----EEEEeCCcc-ccccCCceEEccCCChHHHHHhhc-CCCCEEEEeCCCCCCCHHH
Confidence 358 578999999999998987 444433320 1111 2222334444443 148988766532
Q ss_pred ------hhHHHHHHHHHHcCCcEEEEEcC
Q psy3769 389 ------IFATSAIWEAIESELELVICITE 411 (974)
Q Consensus 389 ------~~v~~~v~e~~~~gv~~~vi~s~ 411 (974)
..+..+++.|.+.|++.+|.+|+
T Consensus 81 ~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 81 YRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp --CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 22556777777778888777765
No 381
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=25.25 E-value=11 Score=40.02 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=39.8
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCC-cc---ccccccccchhhhcccCCCcEEEEEecchhHHHHHHHH
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QK---FEEIPIFDTVKNAKNETGATVSVIYVPAIFATSAIWEA 398 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e~ 398 (974)
|+| .|..|..+.+.+.+. ++ .+..++++... ++ -.|. .+.+++++.+ ..|++++++|+....++++++
T Consensus 7 iIG-~G~mG~~la~~l~~~-~~---v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~--~~DvVilav~~~~~~~v~~~l 78 (276)
T 2i76_A 7 FVG-TGTLTRFFLECLKDR-YE---IGYILSRSIDRARNLAEVYGG-KAATLEKHPE--LNGVVFVIVPDRYIKTVANHL 78 (276)
T ss_dssp EES-CCHHHHHHHHTTC--------CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC-----CEEECSCTTTHHHHHTTT
T ss_pred EEe-CCHHHHHHHHHHHHc-Cc---EEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHh--cCCEEEEeCChHHHHHHHHHh
Confidence 456 367777777777766 55 22345554200 11 1244 6677777654 689999999999988888765
Q ss_pred H
Q psy3769 399 I 399 (974)
Q Consensus 399 ~ 399 (974)
.
T Consensus 79 ~ 79 (276)
T 2i76_A 79 N 79 (276)
T ss_dssp C
T ss_pred c
Confidence 4
No 382
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.98 E-value=76 Score=30.72 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=59.6
Q ss_pred CeEEEEEccccccCcccccchhhhh-ccCCCCceEEEE-ecCCCCCccccccccccchhhhcccCCCcEEEEEecc----
Q psy3769 315 NLKTILVNIFGITGKTGRFHTNLCL-NYGNGKKAFVAG-VNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPA---- 388 (974)
Q Consensus 315 ~~~~i~vni~G~~~k~G~~v~~~l~-~~g~~g~~~V~p-VnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~---- 388 (974)
+.++++-.+-|.....|..++..++ ..||+ +++. .+- ....+.+.-.+..+|++.++.-.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~e---Vi~lG~~~-----------p~e~lv~aa~~~~~diV~lS~~~~~~~ 83 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFE---VVYTGLRQ-----------TPEQVAMAAVQEDVDVIGVSILNGAHL 83 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCE---EECCCSBC-----------CHHHHHHHHHHTTCSEEEEEESSSCHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCE---EEECCCCC-----------CHHHHHHHHHhcCCCEEEEEeechhhH
Confidence 4455554454555567877777766 67887 2321 111 11233333334589999988743
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCce-EEccCCc
Q psy3769 389 IFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKTL-LLGPNCP 440 (974)
Q Consensus 389 ~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~-viGPnc~ 440 (974)
..++++++++-+.|.+.+.++-+|....+.. +.++ +.|+. +.+|++.
T Consensus 84 ~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~---~~l~--~~G~d~v~~~~~~ 131 (161)
T 2yxb_A 84 HLMKRLMAKLRELGADDIPVVLGGTIPIPDL---EPLR--SLGIREIFLPGTS 131 (161)
T ss_dssp HHHHHHHHHHHHTTCTTSCEEEEECCCHHHH---HHHH--HTTCCEEECTTCC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCchhcH---HHHH--HCCCcEEECCCCC
Confidence 4566677777777753233334454333222 2345 56775 6888773
No 383
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=24.70 E-value=1.1e+02 Score=33.26 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=50.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCccccccccccchhhhcccCCCcEEEEEec--------------c
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVP--------------A 388 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp--------------~ 388 (974)
|.|.++..|..+.+.|++.|+- .|+.+... .-..++.++.+ .+|.++-+.. .
T Consensus 5 VtGatG~iG~~l~~~L~~~g~~---~v~~~d~~---------~d~~~l~~~~~--~~d~Vih~a~~~~~~~~~~~~~~n~ 70 (369)
T 3st7_A 5 ITGAKGFVGKNLKADLTSTTDH---HIFEVHRQ---------TKEEELESALL--KADFIVHLAGVNRPEHDKEFSLGNV 70 (369)
T ss_dssp EETTTSHHHHHHHHHHHHHCCC---EEEECCTT---------CCHHHHHHHHH--HCSEEEECCCSBCTTCSTTCSSSCC
T ss_pred EECCCCHHHHHHHHHHHhCCCC---EEEEECCC---------CCHHHHHHHhc--cCCEEEECCcCCCCCCHHHHHHHHH
Confidence 5788899999999999998873 36665442 12245555554 5787775542 1
Q ss_pred hhHHHHHHHHHHcCCc-EEEEEcC
Q psy3769 389 IFATSAIWEAIESELE-LVICITE 411 (974)
Q Consensus 389 ~~v~~~v~e~~~~gv~-~~vi~s~ 411 (974)
..+..+++.|.+.|++ .+|.+|+
T Consensus 71 ~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 71 SYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp BHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCc
Confidence 2345678888888988 6666665
No 384
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.55 E-value=52 Score=32.46 Aligned_cols=29 Identities=28% Similarity=0.389 Sum_probs=22.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPK 355 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~ 355 (974)
|.|.++..|..+.+.|++.|++ |+.+..+
T Consensus 5 VtGatG~iG~~l~~~L~~~g~~----V~~~~R~ 33 (221)
T 3ew7_A 5 IIGATGRAGSRILEEAKNRGHE----VTAIVRN 33 (221)
T ss_dssp EETTTSHHHHHHHHHHHHTTCE----EEEEESC
T ss_pred EEcCCchhHHHHHHHHHhCCCE----EEEEEcC
Confidence 5788889999999999998876 5544433
No 385
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=24.22 E-value=97 Score=32.43 Aligned_cols=22 Identities=32% Similarity=0.442 Sum_probs=19.7
Q ss_pred cccccCcccccchhhhhccCCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNG 344 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~ 344 (974)
|.|.++..|..+++.|++.|++
T Consensus 9 VtGatG~iG~~l~~~L~~~g~~ 30 (313)
T 1qyd_A 9 IVGGTGYIGKRIVNASISLGHP 30 (313)
T ss_dssp EESTTSTTHHHHHHHHHHTTCC
T ss_pred EEcCCcHHHHHHHHHHHhCCCc
Confidence 5799999999999999998987
No 386
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=24.17 E-value=1.6e+02 Score=30.78 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=42.7
Q ss_pred CCCEEEEeCChhhHHHHHHHHHHcCCc-----eEEEeecCCCCCCCCCHHHHHHHhhhCCCccEEEEEEccC
Q psy3769 460 KGRIGVVSRSGTLTYEVVCQLTELGFG-----QSSAVGIGGDPINGLKYIDILKLFNEDQNTDAVIMIGEIG 526 (974)
Q Consensus 460 ~G~va~vSQSG~~~~~~~~~~~~~g~g-----~s~~vs~Gn~a~~dv~~~d~l~~l~~Dp~t~~I~ly~E~~ 526 (974)
+..-|+++.+..++..++..++++|+. ++.+++..+. ...+.++.+.|....|..-.+.+
T Consensus 203 ~~~~ai~~~nd~~A~g~~~al~~~g~~vP~d~i~vv~g~D~~-------~~~~~~i~~~~~lttv~~~~~~~ 267 (330)
T 3uug_A 203 AKVDAVLSPYDGLSIGIISSLKGVGYGTKDQPLPVVSGQDAE-------VPSVKSIIAGEQYSTIFKDTREL 267 (330)
T ss_dssp SCCCEEECSSHHHHHHHHHHHHHTTCSSSSSCCCEECCSSCC-------HHHHHHHHTTSSCCEEECCHHHH
T ss_pred CCeEEEEECCCchHHHHHHHHHHcCCCCCCCceEEEEecCCC-------HHHHHHHHcCCceEEEecCHHHH
Confidence 456799999999999999999999885 4444344333 24566677778877776666654
No 387
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=23.86 E-value=84 Score=32.84 Aligned_cols=22 Identities=36% Similarity=0.495 Sum_probs=19.7
Q ss_pred cccccCcccccchhhhhccCCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNG 344 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~ 344 (974)
|.|.++..|..+.+.|++.|++
T Consensus 7 VtGatG~iG~~l~~~L~~~g~~ 28 (307)
T 2gas_A 7 ILGPTGAIGRHIVWASIKAGNP 28 (307)
T ss_dssp EESTTSTTHHHHHHHHHHHTCC
T ss_pred EECCCchHHHHHHHHHHhCCCc
Confidence 4799999999999999998987
No 388
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=23.55 E-value=51 Score=30.97 Aligned_cols=107 Identities=16% Similarity=0.027 Sum_probs=56.0
Q ss_pred EEEEEccccccCcccccchhhhh-ccCCCCceEEEE-ecCCCCCccccccccccchhhhcccCCCcEEEEEecchh----
Q psy3769 317 KTILVNIFGITGKTGRFHTNLCL-NYGNGKKAFVAG-VNPKKNGQKFEEIPIFDTVKNAKNETGATVSVIYVPAIF---- 390 (974)
Q Consensus 317 ~~i~vni~G~~~k~G~~v~~~l~-~~g~~g~~~V~p-VnP~~~g~~i~G~~~y~sl~dip~~~~vDlavi~vp~~~---- 390 (974)
++++-.+-|.....|..++..++ ..||+ ++|. .+-. ...+.+.-.+..+|++.++.-...
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~G~~---Vi~lG~~~p-----------~e~~v~~a~~~~~d~v~lS~~~~~~~~~ 70 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNAGFN---VVNIGVLSP-----------QELFIKAAIETKADAILVSSLYGQGEID 70 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHTTCE---EEEEEEEEC-----------HHHHHHHHHHHTCSEEEEEECSSTHHHH
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHCCCE---EEECCCCCC-----------HHHHHHHHHhcCCCEEEEEecCcCcHHH
Confidence 44443443454557777776666 67888 4432 2111 122333332347898888864333
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCC---hHHHHHHHHHHhcCCCCc-eEEccCC
Q psy3769 391 ATSAIWEAIESELELVICITEGIP---VRDMLILKNKMKKNNSKT-LLLGPNC 439 (974)
Q Consensus 391 v~~~v~e~~~~gv~~~vi~s~G~~---e~~~~~l~~~a~~~~~gi-~viGPnc 439 (974)
+++.++++-++|.+.+.++-+|.+ .++..+..+.++ +.|+ .+.+|.+
T Consensus 71 ~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~--~~G~d~~~~~g~ 121 (137)
T 1ccw_A 71 CKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFK--DMGYDRVYAPGT 121 (137)
T ss_dssp HTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHH--HTTCSEECCTTC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHH--HCCCCEEECCCC
Confidence 455666776777643334444532 333222235566 6777 4556655
No 389
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=23.24 E-value=1e+02 Score=35.42 Aligned_cols=56 Identities=20% Similarity=0.294 Sum_probs=37.5
Q ss_pred CCCCceeeCCHHHHHHHHHHcCCCcEEEEeeeecCcccccCeEEE--eCCHHHHHHHHHHHHhc
Q psy3769 18 TIPKGILCMNVDEAIKAAKKIGGNSWVIKAQIHAGGRGKCGGIKL--AQSLEQVEKYTKKILGM 79 (974)
Q Consensus 18 pvp~~~~~~s~eea~~~a~~ig~~PvVvK~qi~~ggrgk~GGV~l--~~s~ee~~~a~~~~l~~ 79 (974)
|..++..|.++++.....+++. .+|+||-.-+||+ ||.+ ..|.+|.++..+++..+
T Consensus 342 ~~VpT~~c~~~~~~~~vl~~l~--~lViKp~~g~gg~----gv~iG~~~s~~e~~~~~~~i~~~ 399 (474)
T 3n6x_A 342 SNVPTYQLSKADDLKYVLDNLA--ELVVKEVQGSGGY----GMLVGPAASKQELEDFRQRILAN 399 (474)
T ss_dssp EECCCEETTSHHHHHHHHHSGG--GEEEEECCCE---------EEGGGCCHHHHHHHHHHHHHS
T ss_pred cCCCceecCCHHHHHHHHhchh--heEEEecCCCCCC----ceEECCcCCHHHHHHHHHHHHhC
Confidence 3334667888888888888875 7999995544443 7777 45888888877777654
No 390
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.09 E-value=93 Score=32.82 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=50.2
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCC-CCC--cc--------cccccc-------ccchhhhcccCCCcEEEE
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPK-KNG--QK--------FEEIPI-------FDTVKNAKNETGATVSVI 384 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~-~~g--~~--------i~G~~~-------y~sl~dip~~~~vDlavi 384 (974)
|.|.++..|..+++.|++.|++ ++..+... ... +. -.|+.. ..++.++.+ .+|.++.
T Consensus 9 VtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~ 83 (321)
T 3c1o_A 9 IYGGTGYIGKFMVRASLSFSHP---TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS 83 (321)
T ss_dssp EETTTSTTHHHHHHHHHHTTCC---EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred EEcCCchhHHHHHHHHHhCCCc---EEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence 5799999999999999988987 33333322 100 00 012222 234555544 6898887
Q ss_pred Eecc---hhHHHHHHHHHHcC-CcEEE
Q psy3769 385 YVPA---IFATSAIWEAIESE-LELVI 407 (974)
Q Consensus 385 ~vp~---~~v~~~v~e~~~~g-v~~~v 407 (974)
+... .....+++.|.+.| ++.+|
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEe
Confidence 7653 44667888888888 98854
No 391
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=21.77 E-value=30 Score=36.77 Aligned_cols=87 Identities=13% Similarity=-0.001 Sum_probs=49.2
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCCccc---ccc---ccccchhhhcccCCCcEEEEEecchhHHHHHHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKF---EEI---PIFDTVKNAKNETGATVSVIYVPAIFATSAIWE 397 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i---~G~---~~y~sl~dip~~~~vDlavi~vp~~~v~~~v~e 397 (974)
+| .|.+|......|.+.|++ |..+.++..+-+. .|. +...+..+.. ..+.|++++++|+..+.+++++
T Consensus 8 iG-aGa~G~~~a~~L~~~g~~----V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~ 81 (294)
T 3g17_A 8 IG-PGAVGTTIAYELQQSLPH----TTLIGRHAKTITYYTVPHAPAQDIVVKGYEDV-TNTFDVIIIAVKTHQLDAVIPH 81 (294)
T ss_dssp EC-CSHHHHHHHHHHHHHCTT----CEEEESSCEEEEEESSTTSCCEEEEEEEGGGC-CSCEEEEEECSCGGGHHHHGGG
T ss_pred EC-CCHHHHHHHHHHHHCCCe----EEEEEeccCcEEEEecCCeeccceecCchHhc-CCCCCEEEEeCCccCHHHHHHH
Confidence 45 345666666666666765 4444443211111 121 1111222321 0268999999999999999988
Q ss_pred HHHc-CC-cEEEEEcCCCChH
Q psy3769 398 AIES-EL-ELVICITEGIPVR 416 (974)
Q Consensus 398 ~~~~-gv-~~~vi~s~G~~e~ 416 (974)
.... +- ..++.++.|+...
T Consensus 82 l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 82 LTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp HHHHEEEEEEEEECCSSCCCG
T ss_pred HHHhhCCCCEEEEeccCcccH
Confidence 8653 22 2356777888643
No 392
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=21.74 E-value=95 Score=31.40 Aligned_cols=63 Identities=10% Similarity=0.124 Sum_probs=44.5
Q ss_pred EeecCCCCCCCC---CHHHHHHHhhhCCCccEEEEEEccCCCchHHHHHHHHh--cCCCCEEEEecccC
Q psy3769 490 AVGIGGDPINGL---KYIDILKLFNEDQNTDAVIMIGEIGGLDEIYAANWIKK--NMKKPVIGFIAGIT 553 (974)
Q Consensus 490 ~vs~Gn~a~~dv---~~~d~l~~l~~Dp~t~~I~ly~E~~g~~~~~~~~f~~~--~~~KPVv~lk~Grs 553 (974)
+|.+++.- .+- .+..-|.++.+|+..+.|.+|+.+-|..-..+....+. ..++||+++..|..
T Consensus 29 iI~l~g~I-~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~i~~~~~~V~t~~~G~A 96 (203)
T 3qwd_A 29 IIMLGSQI-DDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMA 96 (203)
T ss_dssp EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EEEEcCEE-CHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCcEEEEeeee
Confidence 66777761 121 23344667777888999999999988765566666555 56799999998875
No 393
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=21.40 E-value=36 Score=35.89 Aligned_cols=97 Identities=16% Similarity=0.099 Sum_probs=58.3
Q ss_pred ccccCcccccchhhhhccCCCCceEEEEecCCCCC-cc---ccccccccchhhhcccCCCcEEEEEecchhHHH---HHH
Q psy3769 324 FGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNG-QK---FEEIPIFDTVKNAKNETGATVSVIYVPAIFATS---AIW 396 (974)
Q Consensus 324 ~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g-~~---i~G~~~y~sl~dip~~~~vDlavi~vp~~~v~~---~v~ 396 (974)
+| .+..|..+...|.+.|++ |+.+|++... ++ -.|...++++.++.+ ..|+++.++|+...++ .+.
T Consensus 135 iG-aG~~g~aia~~L~~~g~~----V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~--~aDiVi~atp~~~~~~~~~~i~ 207 (275)
T 2hk9_A 135 LG-AGGASRAVIYALVKEGAK----VFLWNRTKEKAIKLAQKFPLEVVNSPEEVID--KVQVIVNTTSVGLKDEDPEIFN 207 (275)
T ss_dssp EC-CSHHHHHHHHHHHHHTCE----EEEECSSHHHHHHHTTTSCEEECSCGGGTGG--GCSEEEECSSTTSSTTCCCSSC
T ss_pred EC-chHHHHHHHHHHHHcCCE----EEEEECCHHHHHHHHHHcCCeeehhHHhhhc--CCCEEEEeCCCCCCCCCCCCCC
Confidence 56 356777788888887863 7777776310 11 125566667777765 7999999999876432 232
Q ss_pred -HHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCceEE
Q psy3769 397 -EAIESELELVICITEGIPVRDMLILKNKMKKNNSKTLLL 435 (974)
Q Consensus 397 -e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi~vi 435 (974)
++.+.| . +++.-... ..++.+.++ +.|.+++
T Consensus 208 ~~~l~~g--~-~viDv~~~---~t~ll~~a~--~~g~~~v 239 (275)
T 2hk9_A 208 YDLIKKD--H-VVVDIIYK---ETKLLKKAK--EKGAKLL 239 (275)
T ss_dssp GGGCCTT--S-EEEESSSS---CCHHHHHHH--HTTCEEE
T ss_pred HHHcCCC--C-EEEEcCCC---hHHHHHHHH--HCcCEEE
Confidence 222222 2 44444441 233556777 7788876
No 394
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=21.37 E-value=3e+02 Score=29.68 Aligned_cols=106 Identities=9% Similarity=0.068 Sum_probs=67.9
Q ss_pred CcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCCCChHHHHHHHHHHhcCCCCc--eEEccCCccccccCccccccCCCC
Q psy3769 379 ATVSVIYVPAIFATSAIWEAIESELELVICITEGIPVRDMLILKNKMKKNNSKT--LLLGPNCPGLIVPEEIKIGIMPGN 456 (974)
Q Consensus 379 vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G~~e~~~~~l~~~a~~~~~gi--~viGPnc~G~~~~~~~~~~~~~~~ 456 (974)
-|.++....+..+..+++.|.+.|-+.-|++.+.-|..+-.++....+ +.|+ .++=+|..|.+-......-.-...
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~--~~gI~vtli~Dsa~~~~m~~vd~VivGAd~ 199 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALC--HLNVPVTVVLDAAVGYIMEKADLVIVGAEG 199 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHH--TTTCCEEEECGGGHHHHGGGCSEEEEECSE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHH--HcCCCEEEEehhHHHHHHHhCCEEEECceE
Confidence 355556667788899999998888777788888877544445666666 6665 477777777554322211111111
Q ss_pred CCCCCCEEEEeCChhhHHHHHHHHHHcCCceEEE
Q psy3769 457 IHKKGRIGVVSRSGTLTYEVVCQLTELGFGQSSA 490 (974)
Q Consensus 457 ~~~~G~va~vSQSG~~~~~~~~~~~~~g~g~s~~ 490 (974)
....|. +++..|+...+++ |++.|+.|--+
T Consensus 200 i~~nG~--v~nkiGT~~iAl~--Ak~~~vP~~V~ 229 (315)
T 3ecs_A 200 VVENGG--IINKIGTNQMAVC--AKAQNKPFYVV 229 (315)
T ss_dssp ECTTSC--EEEETTHHHHHHH--HHHTTCCEEEE
T ss_pred EecCCC--eeehhhhHHHHHH--HHHhCCCEEEE
Confidence 233455 5689999887774 56788887643
No 395
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.23 E-value=1.2e+02 Score=31.80 Aligned_cols=26 Identities=19% Similarity=0.281 Sum_probs=18.3
Q ss_pred CCCEEEEeCChhhHHHHHHHHHHcCC
Q psy3769 460 KGRIGVVSRSGTLTYEVVCQLTELGF 485 (974)
Q Consensus 460 ~G~va~vSQSG~~~~~~~~~~~~~g~ 485 (974)
|.++-+||-||=-..+=+..+.+.|+
T Consensus 202 p~~~~~VsESGI~t~~dv~~l~~~G~ 227 (258)
T 4a29_A 202 PSNVVKVAKLGISERNEIEELRKLGV 227 (258)
T ss_dssp CTTSEEEEEESSCCHHHHHHHHHTTC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHCCC
Confidence 45677899999877776666665543
No 396
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=21.23 E-value=38 Score=36.13 Aligned_cols=85 Identities=11% Similarity=0.085 Sum_probs=49.6
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCCCCCcccc----------------------------------cccccc
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPKKNGQKFE----------------------------------EIPIFD 368 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~~~g~~i~----------------------------------G~~~y~ 368 (974)
|+|. +.+|..+...+.+.|++ |..++++. +... .+....
T Consensus 20 VIG~-G~mG~~iA~~la~~G~~----V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 20 VIGG-GLMGAGIAQVAAATGHT----VVLVDQTE--DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp EECC-SHHHHHHHHHHHHTTCE----EEEECSCH--HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred EECC-CHHHHHHHHHHHhCCCe----EEEEECCH--HHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 4563 56777777788877875 66666653 1111 234456
Q ss_pred chhhhcccCCCcEEEEEecchh--HHHHHHHHHHc-CCcEEEE-EcCCCChH
Q psy3769 369 TVKNAKNETGATVSVIYVPAIF--ATSAIWEAIES-ELELVIC-ITEGIPVR 416 (974)
Q Consensus 369 sl~dip~~~~vDlavi~vp~~~--v~~~v~e~~~~-gv~~~vi-~s~G~~e~ 416 (974)
++++... ..|++++++|... ..+++++..+. .-+.+++ .+++++.+
T Consensus 93 ~~~~~~~--~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~ 142 (302)
T 1f0y_A 93 DAASVVH--STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT 142 (302)
T ss_dssp CHHHHTT--SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH
T ss_pred CHHHhhc--CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 6665544 7899999999754 34455554332 2233333 35677643
No 397
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=20.75 E-value=78 Score=32.51 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=22.5
Q ss_pred cccccCcccccchhhhhccCCCCceEEEEecCC
Q psy3769 323 IFGITGKTGRFHTNLCLNYGNGKKAFVAGVNPK 355 (974)
Q Consensus 323 i~G~~~k~G~~v~~~l~~~g~~g~~~V~pVnP~ 355 (974)
|.|.++..|..+.+.|.+.|++ |+.+..+
T Consensus 7 VtGatG~iG~~l~~~L~~~g~~----V~~~~r~ 35 (267)
T 3ay3_A 7 VTGAAGGVGSAIRPHLGTLAHE----VRLSDIV 35 (267)
T ss_dssp EESTTSHHHHHHGGGGGGTEEE----EEECCSS
T ss_pred EECCCCHHHHHHHHHHHhCCCE----EEEEeCC
Confidence 5788888999999999988865 6655443
No 398
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=20.36 E-value=1.3e+02 Score=32.89 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=32.9
Q ss_pred chhhhccc-CCCcEEEEEecchhHHHHHHHHHHcCCcEEEEEcCC
Q psy3769 369 TVKNAKNE-TGATVSVIYVPAIFATSAIWEAIESELELVICITEG 412 (974)
Q Consensus 369 sl~dip~~-~~vDlavi~vp~~~v~~~v~e~~~~gv~~~vi~s~G 412 (974)
+.+++|-. ..+|+++.++|.....+......++|+|.+||=.++
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 44555411 269999999999999999999999999985443333
Done!