BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3772
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G2T8|RL19_HERAR 50S ribosomal protein L19 OS=Herminiimonas arsenicoxydans GN=rplS
PE=3 SV=1
Length = 128
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 108/119 (90%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ +EQEEI RL KNIPDF GDT+IVN+NV+EGTRKR QAYEG+VISRRN+GLNSN
Sbjct: 1 MDLIQTLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL ++
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQR 119
>sp|A2SES9|RL19_METPP 50S ribosomal protein L19 OS=Methylibium petroleiphilum (strain
PM1) GN=rplS PE=3 SV=1
Length = 117
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 105/116 (90%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ +EQEEI RL K IP F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLNS+
Sbjct: 1 MDLIQTLEQEEIARLNKTIPAFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRQRSGKSARIKEKL 116
>sp|A1WG50|RL19_VEREI 50S ribosomal protein L19 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rplS PE=3 SV=1
Length = 128
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 103/116 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +E EEI RL K IPDF GDT+IVN+NV+EG+RKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQTLEAEEIARLNKTIPDFSAGDTVIVNVNVVEGSRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQ YSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKL 116
>sp|A1WB49|RL19_ACISJ 50S ribosomal protein L19 OS=Acidovorax sp. (strain JS42) GN=rplS
PE=3 SV=1
Length = 127
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 102/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
F VRKIS EG+ERTFQ YSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKL 116
>sp|B9ME96|RL19_ACIET 50S ribosomal protein L19 OS=Acidovorax ebreus (strain TPSY)
GN=rplS PE=3 SV=1
Length = 127
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 102/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
F VRKIS EG+ERTFQ YSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKL 116
>sp|B2U8L3|RL19_RALPJ 50S ribosomal protein L19 OS=Ralstonia pickettii (strain 12J)
GN=rplS PE=3 SV=1
Length = 128
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 106/118 (89%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI++IEQEEI RL N IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIEQIEQEEIKRLTANKTIPPFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
S+FIVRKIS EG+ERTFQLYSP+++SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 SSFIVRKISSGEGVERTFQLYSPLLASIEVKRRGDVRRAKLYYLRQRSGKSARIKEKL 118
>sp|A6SVI7|RL19_JANMA 50S ribosomal protein L19 OS=Janthinobacterium sp. (strain
Marseille) GN=rplS PE=3 SV=1
Length = 128
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 109/119 (91%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ++EQEEI RL KNIPDF GDT++VN+NV+EGTRKR QAYEG+VISRRN+GLNSN
Sbjct: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVVVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL ++
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQR 119
>sp|Q13VF1|RL19_BURXL 50S ribosomal protein L19 OS=Burkholderia xenovorans (strain LB400)
GN=rplS PE=3 SV=1
Length = 128
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R +K IP+F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIARALGEKTIPEFAPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRDRSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|B1Y0H8|RL19_LEPCP 50S ribosomal protein L19 OS=Leptothrix cholodnii (strain ATCC
51168 / LMG 8142 / SP-6) GN=rplS PE=3 SV=1
Length = 117
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/116 (76%), Positives = 106/116 (91%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ++EQEEI RL K IP F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLNS+
Sbjct: 1 MDLIQQLEQEEIARLNKVIPVFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRQRSGKSARIKEKL 116
>sp|Q0BH66|RL19_BURCM 50S ribosomal protein L19 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rplS PE=3 SV=1
Length = 130
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EGTRKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|B4EAN3|RL19_BURCJ 50S ribosomal protein L19 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rplS PE=3 SV=1
Length = 130
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A0K5P8|RL19_BURCH 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain
HI2424) GN=rplS PE=3 SV=1
Length = 130
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|B1JXU6|RL19_BURCC 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain
MC0-3) GN=rplS PE=3 SV=1
Length = 130
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q1BY01|RL19_BURCA 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain AU
1054) GN=rplS PE=3 SV=1
Length = 130
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A1TND3|RL19_ACIAC 50S ribosomal protein L19 OS=Acidovorax citrulli (strain AAC00-1)
GN=rplS PE=3 SV=1
Length = 128
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP+F GDT+IV++NV+EG RKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
F VRKIS EG+ERTFQ YSP+I+SI VKRRGDVRRAKLYYLR SGKSARIKEKL
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRDRSGKSARIKEKL 116
>sp|A9ADS8|RL19_BURM1 50S ribosomal protein L19 OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=rplS PE=3 SV=1
Length = 130
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q2SXZ8|RL19_BURTA 50S ribosomal protein L19 OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rplS
PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q63S33|RL19_BURPS 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
K96243) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A3NC04|RL19_BURP6 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain 668)
GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q3JQ09|RL19_BURP1 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
1710b) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A3NXU0|RL19_BURP0 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
1106a) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A1V6J1|RL19_BURMS 50S ribosomal protein L19 OS=Burkholderia mallei (strain SAVP1)
GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q62M53|RL19_BURMA 50S ribosomal protein L19 OS=Burkholderia mallei (strain ATCC
23344) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A2S4N7|RL19_BURM9 50S ribosomal protein L19 OS=Burkholderia mallei (strain NCTC
10229) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A3MHS0|RL19_BURM7 50S ribosomal protein L19 OS=Burkholderia mallei (strain NCTC
10247) GN=rplS PE=3 SV=1
Length = 129
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A4JCK0|RL19_BURVG 50S ribosomal protein L19 OS=Burkholderia vietnamiensis (strain G4
/ LMG 22486) GN=rplS PE=3 SV=1
Length = 130
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|B1YV60|RL19_BURA4 50S ribosomal protein L19 OS=Burkholderia ambifaria (strain MC40-6)
GN=rplS PE=3 SV=1
Length = 130
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q8Y0V7|RL19_RALSO 50S ribosomal protein L19 OS=Ralstonia solanacearum (strain
GMI1000) GN=rplS PE=3 SV=1
Length = 128
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/118 (75%), Positives = 105/118 (88%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI++IEQEEI RL N IP F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIEQIEQEEIKRLTANKTIPPFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
S+FIVRKIS EG+ERTFQLYSP+++SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 SSFIVRKISSGEGVERTFQLYSPLLASIEVKRRGDVRRAKLYYLRERSGKSARIKEKL 118
>sp|B2JF32|RL19_BURP8 50S ribosomal protein L19 OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=rplS PE=3 SV=1
Length = 127
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IV++NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|Q12CW3|RL19_POLSJ 50S ribosomal protein L19 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rplS PE=3 SV=1
Length = 121
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 104/119 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP + GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQTLEQEEISRLNKTIPAYAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
FIVRK+S EG+ERTFQ+YSP+I+ I VKRRGDVRRAKLYYLR SGKSARIKEKL K
Sbjct: 61 FIVRKVSNGEGVERTFQVYSPLIAKIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLGAK 119
>sp|Q39ID3|RL19_BURS3 50S ribosomal protein L19 OS=Burkholderia sp. (strain 383) GN=rplS
PE=3 SV=1
Length = 130
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ R++GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRSRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR+ SGKSARIKEKL+
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|B2T604|RL19_BURPP 50S ribosomal protein L19 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rplS PE=3 SV=1
Length = 129
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI +EQEEI R +K IP+F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAILEQEEIGRALGEKTIPEFAPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGDVRRAKLYYLR SGKSARIKEKL+
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRDRSGKSARIKEKLVA 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|C1DBG1|RL19_LARHH 50S ribosomal protein L19 OS=Laribacter hongkongensis (strain
HLHK9) GN=rplS PE=3 SV=1
Length = 123
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 105/119 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V + V EG R+R+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQQLEQEEIARLGKTIPEFAPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
FIVRKIS EG+ERTFQ YSP+++SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL++K
Sbjct: 61 FIVRKISSGEGVERTFQAYSPLVASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLVRK 119
>sp|A1VMA0|RL19_POLNA 50S ribosomal protein L19 OS=Polaromonas naphthalenivorans (strain
CJ2) GN=rplS PE=3 SV=1
Length = 130
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 103/116 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP + GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQTLEQEEIARLNKTIPVYAPGDTVIVSVNVVEGTRKRLQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQ+YSP+I+ I VKR+GDVRRAKLYYLR SGKSARIKEKL
Sbjct: 61 FIVRKISNGEGVERTFQVYSPLIAKIEVKRKGDVRRAKLYYLRSRSGKSARIKEKL 116
>sp|Q5NXM4|RL19_AROAE 50S ribosomal protein L19 OS=Aromatoleum aromaticum (strain EbN1)
GN=rplS PE=3 SV=1
Length = 128
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 102/118 (86%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLIQ++EQEEI RL +N IP F GDT+IV + V EGTR+R+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIQQLEQEEIARLTQNKTIPAFAPGDTVIVQVKVKEGTRERLQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
SNFIVRKIS EG+ERTFQ YSP++ SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLVDSIEVKRRGDVRRAKLYYLRERSGKSARIKEKL 118
>sp|Q47BI8|RL19_DECAR 50S ribosomal protein L19 OS=Dechloromonas aromatica (strain RCB)
GN=rplS PE=3 SV=1
Length = 126
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 103/119 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++EQEEI RL K IP+F GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIEQLEQEEIARLGKTIPEFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
F VRKIS EG+ERTFQ YSP+++SI VKRRGDVRRAKLYYLR+ SGKSARIKEKL++K
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLVASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLVRK 119
>sp|Q3SGC1|RL19_THIDA 50S ribosomal protein L19 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=rplS PE=3 SV=1
Length = 126
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 100/116 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MN+I+++EQEEI RL K +PDF GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MNIIEQLEQEEIARLGKTVPDFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSA 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
F VRKIS EG+ERTFQ YSP+++S+ VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 FTVRKISAGEGVERTFQTYSPLVASVEVKRRGDVRRAKLYYLRERSGKSARIKEKL 116
>sp|Q82U36|RL19_NITEU 50S ribosomal protein L19 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rplS PE=3 SV=1
Length = 132
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/116 (69%), Positives = 102/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++E+EEI RL K IPDF GDT++VN+NV+EG RKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIEQLEREEIERLGKTIPDFSPGDTLVVNVNVVEGDRKRVQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS E +ERTFQ YSP+I+S+ VKRRG VRRAKLYYLR SGK+ARI+EKL
Sbjct: 61 FIVRKISSGEAVERTFQTYSPLIASMEVKRRGAVRRAKLYYLRDRSGKAARIREKL 116
>sp|Q7NRV7|RL19_CHRVO 50S ribosomal protein L19 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=rplS PE=3 SV=1
Length = 122
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 99/116 (85%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQK+EQEEI RL K +P+F GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MDLIQKLEQEEIARLGKTLPEFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSA 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
F VRK+S EG+ERTFQ YSP+++S+ VKRRGDVRRAKLYYLR +GKSARIKEKL
Sbjct: 61 FTVRKMSAGEGVERTFQTYSPLVASVEVKRRGDVRRAKLYYLRGRTGKSARIKEKL 116
>sp|Q9JVL1|RL19_NEIMA 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=rplS PE=3 SV=1
Length = 121
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 102/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K+IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|A9M2D0|RL19_NEIM0 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup C
(strain 053442) GN=rplS PE=3 SV=1
Length = 121
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 102/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K+IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|A1KSJ8|RL19_NEIMF 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=rplS PE=3
SV=1
Length = 121
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|Q9K0K5|RL19_NEIMB 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rplS PE=1 SV=1
Length = 121
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|B4RIW2|RL19_NEIG2 50S ribosomal protein L19 OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=rplS PE=3 SV=1
Length = 121
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|Q5FA60|RL19_NEIG1 50S ribosomal protein L19 OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=rplS PE=3 SV=1
Length = 121
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS EG+ERTFQLYSP + I VKRRGDVRRAKLYYLR +GK+ARIKEKL
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKL 116
>sp|Q2L2Q1|RL19_BORA1 50S ribosomal protein L19 OS=Bordetella avium (strain 197N) GN=rplS
PE=3 SV=1
Length = 129
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
Query: 1 MNLIQKIEQEEIIRLKKNIP--DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI +EQEEI RL + P +F GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLN
Sbjct: 1 MNLIALLEQEEIKRLTGDKPVTEFAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLK 118
S FIVRKIS E +ERTFQLYSP I+SI VKRRGDVRRAKLYYLR SGKSARIKEKL+
Sbjct: 61 SAFIVRKISSGEAVERTFQLYSPQIASIEVKRRGDVRRAKLYYLRNRSGKSARIKEKLVS 120
Query: 119 K 119
K
Sbjct: 121 K 121
>sp|A1K9L2|RL19_AZOSB 50S ribosomal protein L19 OS=Azoarcus sp. (strain BH72) GN=rplS
PE=3 SV=1
Length = 128
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/118 (70%), Positives = 100/118 (84%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLK--KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLIQ +EQEEI RL K IP F GDT++V + V EG R+R+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIQLLEQEEIARLTAGKTIPAFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
S+FIVRKIS EG+ERTFQ YSP++++I VKRRGDVRRAKLYYLR+ SGKSARIKEKL
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLVATIEVKRRGDVRRAKLYYLRQRSGKSARIKEKL 118
>sp|Q0AIV2|RL19_NITEC 50S ribosomal protein L19 OS=Nitrosomonas eutropha (strain C91)
GN=rplS PE=3 SV=1
Length = 129
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 101/116 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++E+EEI RL K IPDF GDT++VN+NV+EG RKR QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIEQLEREEIERLGKIIPDFSPGDTLVVNVNVVEGDRKRTQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
FIVRKIS E +ERTFQ YSP+I+S+ VKRRG VRRAKLYYLR +GK+ARI+EKL
Sbjct: 61 FIVRKISSGEAVERTFQTYSPLIASMEVKRRGAVRRAKLYYLRDRTGKAARIREKL 116
>sp|B1XVN0|RL19_POLNS 50S ribosomal protein L19 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rplS PE=3 SV=1
Length = 131
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/118 (72%), Positives = 103/118 (87%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI+KIEQEE+ RL N +P F GDT++V++NV+EGTRKR QA+EG+VI++RN+GLN
Sbjct: 1 MNLIEKIEQEEVARLSANKVLPSFAPGDTVVVSVNVVEGTRKRTQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
S+FIVRKIS EG+ERTFQ YSP+I+S+ VKRRGDVRRAKLYYLR SGKSARIKEKL
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLIASVEVKRRGDVRRAKLYYLRDRSGKSARIKEKL 118
>sp|A4SW76|RL19_POLSQ 50S ribosomal protein L19 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rplS PE=3 SV=1
Length = 129
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 101/118 (85%), Gaps = 2/118 (1%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI+KIEQEEI RL N +P F GDT++V +NV+EG RKR QA+EG+VI++RN+GLN
Sbjct: 1 MNLIEKIEQEEIARLSANKTLPSFAPGDTVVVGVNVVEGARKRTQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
S+FIVRKIS EG+ERTFQ YSP+I+SI VKRRGDVRRAKLYYLR SGKSARIKEKL
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRDRSGKSARIKEKL 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,042,633
Number of Sequences: 539616
Number of extensions: 1479532
Number of successful extensions: 5303
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4361
Number of HSP's gapped (non-prelim): 800
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)