Your job contains 1 sequence.
>psy3772
MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN
FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3772
(119 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9KUF7 - symbol:rplS "50S ribosomal protein L19... 368 7.4e-34 1
TIGR_CMR|VC_0564 - symbol:VC_0564 "ribosomal protein L19"... 368 7.4e-34 1
TIGR_CMR|CBU_0442 - symbol:CBU_0442 "ribosomal protein L1... 361 4.1e-33 1
TIGR_CMR|SO_1360 - symbol:SO_1360 "ribosomal protein L19"... 345 2.0e-31 1
UNIPROTKB|P0A7K6 - symbol:rplS "50S ribosomal subunit pro... 344 2.6e-31 1
TIGR_CMR|CPS_4066 - symbol:CPS_4066 "ribosomal protein L1... 331 6.2e-30 1
TIGR_CMR|SPO_3257 - symbol:SPO_3257 "ribosomal protein L1... 327 1.6e-29 1
TIGR_CMR|CHY_1428 - symbol:CHY_1428 "ribosomal protein L1... 319 1.2e-28 1
TIGR_CMR|GSU_0648 - symbol:GSU_0648 "ribosomal protein L1... 315 3.1e-28 1
TIGR_CMR|BA_3978 - symbol:BA_3978 "ribosomal protein L19"... 301 9.4e-27 1
UNIPROTKB|P66080 - symbol:rplS "50S ribosomal protein L19... 279 2.0e-24 1
TIGR_CMR|ECH_0004 - symbol:ECH_0004 "ribosomal protein L1... 278 2.6e-24 1
TIGR_CMR|CJE_0814 - symbol:CJE_0814 "ribosomal protein L1... 274 6.8e-24 1
TIGR_CMR|APH_1266 - symbol:APH_1266 "ribosomal protein L1... 272 1.1e-23 1
TIGR_CMR|DET_0338 - symbol:DET_0338 "ribosomal protein L1... 248 3.9e-21 1
TIGR_CMR|NSE_0895 - symbol:NSE_0895 "ribosomal protein L1... 232 1.9e-19 1
TAIR|locus:2181975 - symbol:AT5G11750 species:3702 "Arabi... 188 8.8e-15 1
TAIR|locus:2032457 - symbol:AT1G24240 species:3702 "Arabi... 187 1.1e-14 1
TAIR|locus:2139757 - symbol:AT4G11630 species:3702 "Arabi... 187 1.1e-14 1
TAIR|locus:2171609 - symbol:AT5G47190 species:3702 "Arabi... 179 7.9e-14 1
TAIR|locus:2129186 - symbol:AT4G17560 species:3702 "Arabi... 177 1.3e-13 1
UNIPROTKB|F1NEW6 - symbol:MRPL19 "Uncharacterized protein... 122 2.3e-07 1
FB|FBgn0037608 - symbol:mRpL19 "mitochondrial ribosomal p... 120 6.1e-07 1
UNIPROTKB|P49406 - symbol:MRPL19 "39S ribosomal protein L... 119 7.1e-07 1
UNIPROTKB|F1MMM8 - symbol:MRPL19 "39S ribosomal protein L... 117 1.2e-06 1
UNIPROTKB|Q2HJI0 - symbol:MRPL19 "39S ribosomal protein L... 117 1.2e-06 1
ZFIN|ZDB-GENE-040801-55 - symbol:mrpl19 "mitochondrial ri... 115 1.9e-06 1
UNIPROTKB|E2R077 - symbol:MRPL19 "Uncharacterized protein... 115 2.0e-06 1
UNIPROTKB|I3LNJ0 - symbol:MRPL19 "Uncharacterized protein... 115 2.0e-06 1
MGI|MGI:1926274 - symbol:Mrpl19 "mitochondrial ribosomal ... 107 1.5e-05 1
RGD|1587381 - symbol:Mrpl19 "mitochondrial ribosomal prot... 101 6.8e-05 1
WB|WBGene00022470 - symbol:mrpl-19 species:6239 "Caenorha... 99 0.00011 1
POMBASE|SPAC343.02 - symbol:img1 "mitochondrial ribosomal... 93 0.00017 1
>UNIPROTKB|Q9KUF7 [details] [associations]
symbol:rplS "50S ribosomal protein L19" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857
InterPro:IPR018257 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
PIR:D82307 RefSeq:NP_230215.1 ProteinModelPortal:Q9KUF7 SMR:Q9KUF7
DNASU:2615241 GeneID:2615241 KEGG:vch:VC0564 PATRIC:20080246
Uniprot:Q9KUF7
Length = 117
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 73/118 (61%), Positives = 95/118 (80%)
Query: 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNF 61
N+I+ +EQE+ +K+++P F GDT++V + V EG R+R+QA+EGIVI+ RN+GL+S F
Sbjct: 3 NIIKALEQEQ---MKQDLPQFAPGDTVVVQVKVKEGDRERLQAFEGIVIAIRNRGLHSAF 59
Query: 62 IVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
VRKIS EG+ERTFQ +SP++ SI VKRRG VRRAKLYYLR SGK+ARIKEKL KK
Sbjct: 60 TVRKISNGEGVERTFQTHSPVVDSIEVKRRGAVRRAKLYYLRDLSGKAARIKEKLAKK 117
>TIGR_CMR|VC_0564 [details] [associations]
symbol:VC_0564 "ribosomal protein L19" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
PIR:D82307 RefSeq:NP_230215.1 ProteinModelPortal:Q9KUF7 SMR:Q9KUF7
DNASU:2615241 GeneID:2615241 KEGG:vch:VC0564 PATRIC:20080246
Uniprot:Q9KUF7
Length = 117
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 73/118 (61%), Positives = 95/118 (80%)
Query: 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNF 61
N+I+ +EQE+ +K+++P F GDT++V + V EG R+R+QA+EGIVI+ RN+GL+S F
Sbjct: 3 NIIKALEQEQ---MKQDLPQFAPGDTVVVQVKVKEGDRERLQAFEGIVIAIRNRGLHSAF 59
Query: 62 IVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
VRKIS EG+ERTFQ +SP++ SI VKRRG VRRAKLYYLR SGK+ARIKEKL KK
Sbjct: 60 TVRKISNGEGVERTFQTHSPVVDSIEVKRRGAVRRAKLYYLRDLSGKAARIKEKLAKK 117
>TIGR_CMR|CBU_0442 [details] [associations]
symbol:CBU_0442 "ribosomal protein L19" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857
InterPro:IPR018257 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024
KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338 HOGENOM:HOG000016264
RefSeq:NP_819479.1 ProteinModelPortal:Q83E85 SMR:Q83E85
GeneID:1208326 KEGG:cbu:CBU_0442 PATRIC:17929575
BioCyc:CBUR227377:GJ7S-440-MONOMER Uniprot:Q83E85
Length = 115
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 70/115 (60%), Positives = 91/115 (79%)
Query: 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNF 61
N+IQ +E E+ K IPDF GDT+ V + V EG R+R+QA+EG+VI+RR++GLNS+F
Sbjct: 3 NIIQLLETEQT--QGKEIPDFRAGDTVTVQVKVKEGNRERLQAFEGVVIARRHRGLNSSF 60
Query: 62 IVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
VRK+S+ EG+ER FQLYSP+I+SI V RRGDVRRAKLYYLR G+ A+IKEK+
Sbjct: 61 TVRKVSHGEGVERVFQLYSPLIASIKVNRRGDVRRAKLYYLRNLRGRKAKIKEKI 115
>TIGR_CMR|SO_1360 [details] [associations]
symbol:SO_1360 "ribosomal protein L19" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_716980.1 ProteinModelPortal:Q8EH70
SMR:Q8EH70 GeneID:1169181 KEGG:son:SO_1360 PATRIC:23522374
Uniprot:Q8EH70
Length = 117
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 70/119 (58%), Positives = 94/119 (78%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MN I K+ +E ++K+++P F GDT++V + V EG ++R+QA+EG+VI++RN+GL+S
Sbjct: 1 MNNIIKMLNDE--QMKQDVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSA 58
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
F VRKIS EG+ER FQ +SP+I+SI VKRRG VRRAKLYYLR SGKSARI+EKL K
Sbjct: 59 FTVRKISNGEGVERAFQTHSPLIASIEVKRRGRVRRAKLYYLRDRSGKSARIREKLATK 117
>UNIPROTKB|P0A7K6 [details] [associations]
symbol:rplS "50S ribosomal subunit protein L19"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 EMBL:X01818 TIGRFAMs:TIGR01024
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX KO:K02884 OMA:TLKVHVR
ProtClustDB:PRK05338 HOGENOM:HOG000016264 PIR:S07951
RefSeq:NP_417097.1 RefSeq:YP_490829.1 ProteinModelPortal:P0A7K6
SMR:P0A7K6 DIP:DIP-35793N IntAct:P0A7K6 MINT:MINT-1245288
PhosSite:P0810432 PaxDb:P0A7K6 PRIDE:P0A7K6
EnsemblBacteria:EBESCT00000002329 EnsemblBacteria:EBESCT00000018082
GeneID:12931612 GeneID:947096 KEGG:ecj:Y75_p2554 KEGG:eco:b2606
PATRIC:32120611 EchoBASE:EB0873 EcoGene:EG10880
BioCyc:EcoCyc:EG10880-MONOMER BioCyc:ECOL316407:JW2587-MONOMER
EvolutionaryTrace:P0A7K6 Genevestigator:P0A7K6 Uniprot:P0A7K6
Length = 115
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 66/115 (57%), Positives = 95/115 (82%)
Query: 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNF 61
N+I+++EQE+ +K+++P F GDT+ V + V+EG++KR+QA+EG+VI+ RN+GL+S F
Sbjct: 3 NIIKQLEQEQ---MKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAF 59
Query: 62 IVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKL 116
VRKIS EG+ER FQ +SP++ SI VKRRG VR+AKLYYLR+ +GK+ARIKE+L
Sbjct: 60 TVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERL 114
>TIGR_CMR|CPS_4066 [details] [associations]
symbol:CPS_4066 "ribosomal protein L19" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_270721.1 ProteinModelPortal:Q47WV1
SMR:Q47WV1 STRING:Q47WV1 GeneID:3521778 KEGG:cps:CPS_4066
PATRIC:21471007 BioCyc:CPSY167879:GI48-4079-MONOMER Uniprot:Q47WV1
Length = 117
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 64/117 (54%), Positives = 90/117 (76%)
Query: 3 LIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFI 62
+++ +EQE+ +K ++P F GDT++V + V E + R+QA+EG+VI+ +++GL+S F
Sbjct: 4 ILEMLEQEQ---MKTDLPAFAPGDTVVVQVKVTEADKSRLQAFEGVVIAVKSRGLHSAFT 60
Query: 63 VRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
VRKIS G+ER FQ +SPI+ SI VKRRGDVR+AKLYYLR+ SG+ ARIKEKL KK
Sbjct: 61 VRKISNGVGVERVFQTHSPIVDSIEVKRRGDVRQAKLYYLRELSGRKARIKEKLAKK 117
>TIGR_CMR|SPO_3257 [details] [associations]
symbol:SPO_3257 "ribosomal protein L19" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 OMA:EAKRTLP RefSeq:YP_168460.1
ProteinModelPortal:Q5LNE8 GeneID:3195464 KEGG:sil:SPO3257
PATRIC:23379959 Uniprot:Q5LNE8
Length = 127
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 70/115 (60%), Positives = 82/115 (71%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRN-KGLNS 59
M+LI ++E E+I L K+IPDF GDTI V V EGTR R+Q YEG+ ISR+N G+
Sbjct: 1 MDLIAQLEAEQIAALGKDIPDFKAGDTIRVGYKVTEGTRSRVQNYEGVCISRKNGSGIAG 60
Query: 60 NFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKE 114
+F VRKIS+ EG+ER F LYS I SI V RRG VRRAKLYYLR GKSARI E
Sbjct: 61 SFTVRKISFGEGVERVFPLYSTNIDSITVVRRGRVRRAKLYYLRARRGKSARIAE 115
>TIGR_CMR|CHY_1428 [details] [associations]
symbol:CHY_1428 "ribosomal protein L19" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257
Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR
ProtClustDB:PRK05338 HOGENOM:HOG000016264 RefSeq:YP_360260.1
ProteinModelPortal:Q3AC74 SMR:Q3AC74 STRING:Q3AC74 GeneID:3728543
KEGG:chy:CHY_1428 PATRIC:21275987
BioCyc:CHYD246194:GJCN-1427-MONOMER Uniprot:Q3AC74
Length = 113
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 63/115 (54%), Positives = 87/115 (75%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+L++ +E+E+ L+K++P+F GDT+ V VIEG R+RIQ YEG+VI +R GL++
Sbjct: 1 MDLLKSLEEEQ---LRKDLPEFRPGDTVKVYFKVIEGNRERIQPYEGVVIRKRGSGLSAT 57
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
F VR++SY G+ERTF L+SP I I V RRG VRRA+LYYLRK +GK+ARI E+
Sbjct: 58 FTVRRVSYGIGVERTFPLHSPRIEKIEVIRRGKVRRARLYYLRKLTGKAARIAER 112
>TIGR_CMR|GSU_0648 [details] [associations]
symbol:GSU_0648 "ribosomal protein L19" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_951705.1 ProteinModelPortal:Q74FG1
SMR:Q74FG1 GeneID:2687158 KEGG:gsu:GSU0648 PATRIC:22024043
BioCyc:GSUL243231:GH27-658-MONOMER Uniprot:Q74FG1
Length = 118
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 61/112 (54%), Positives = 84/112 (75%)
Query: 4 IQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+ KI+ E+ ++KKNIP F GDT+ V++ ++EG + RIQA++G+ ISR+N G+ +F V
Sbjct: 1 MNKIDAIELEQMKKNIPPFKPGDTLKVHVKIVEGDKSRIQAFQGVCISRQNGGIRESFTV 60
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
RKIS N G+ER F L+SP + +I V RG VRRAKLYYLRK GK+ARI+EK
Sbjct: 61 RKISNNIGVERVFPLHSPTVDAIEVITRGHVRRAKLYYLRKLRGKAARIREK 112
>TIGR_CMR|BA_3978 [details] [associations]
symbol:BA_3978 "ribosomal protein L19" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024
RefSeq:NP_846220.1 RefSeq:YP_020617.1 RefSeq:YP_029942.1
ProteinModelPortal:Q81WJ6 SMR:Q81WJ6 DNASU:1086794
EnsemblBacteria:EBBACT00000009389 EnsemblBacteria:EBBACT00000014058
EnsemblBacteria:EBBACT00000023738 GeneID:1086794 GeneID:2820046
GeneID:2848344 KEGG:ban:BA_3978 KEGG:bar:GBAA_3978 KEGG:bat:BAS3691
HOGENOM:HOG000016265 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
BioCyc:BANT260799:GJAJ-3749-MONOMER
BioCyc:BANT261594:GJ7F-3866-MONOMER Uniprot:Q81WJ6
Length = 114
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 14 RLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIE 73
+LK ++P F GDT+ V++ V+EGTR+RIQ +EG+VI RR G++ F VRKISY G+E
Sbjct: 12 QLKTDLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVE 71
Query: 74 RTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKE 114
RTF +++P I+ I V RRG VRRAKLYYLR GK ARIKE
Sbjct: 72 RTFPVHTPRIAKIEVLRRGKVRRAKLYYLRNLRGKKARIKE 112
>UNIPROTKB|P66080 [details] [associations]
symbol:rplS "50S ribosomal protein L19" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BX842581 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 TIGRFAMs:TIGR01024 HOGENOM:HOG000016265 KO:K02884
OMA:TLKVHVR ProtClustDB:PRK05338 PIR:C70927 RefSeq:NP_217420.1
RefSeq:NP_337484.1 RefSeq:YP_006516357.1 ProteinModelPortal:P66080
SMR:P66080 PRIDE:P66080 EnsemblBacteria:EBMYCT00000003311
EnsemblBacteria:EBMYCT00000069725 GeneID:13317697 GeneID:887356
GeneID:925306 KEGG:mtc:MT2972 KEGG:mtu:Rv2904c KEGG:mtv:RVBD_2904c
PATRIC:18128304 TubercuList:Rv2904c Uniprot:P66080
Length = 113
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 56/101 (55%), Positives = 73/101 (72%)
Query: 15 LKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIER 74
L+ +IP F GDTI V++ VIEG ++R+Q ++G+VI R+ G+ F VRK SY G+ER
Sbjct: 12 LRDDIPAFNPGDTINVHVKVIEGAKERLQVFKGVVIRRQGGGIRETFTVRKESYGVGVER 71
Query: 75 TFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
TF ++SP I I V RGDVRRAKLYYLR+ GK A+IKEK
Sbjct: 72 TFPVHSPNIDHIEVVTRGDVRRAKLYYLRELRGKKAKIKEK 112
>TIGR_CMR|ECH_0004 [details] [associations]
symbol:ECH_0004 "ribosomal protein L19" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 Pfam:PF01245 PIRSF:PIRSF002191
PRINTS:PR00061 PROSITE:PS01015 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_506839.1 ProteinModelPortal:Q2GI94
STRING:Q2GI94 GeneID:3927864 KEGG:ech:ECH_0004 PATRIC:20575581
OMA:EAKRTLP BioCyc:ECHA205920:GJNR-4-MONOMER Uniprot:Q2GI94
Length = 125
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 55/115 (47%), Positives = 82/115 (71%)
Query: 2 NLIQKIEQEEIIRLK-KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
+L+++ ++++ L K IP F +GDT+ V++ + +G +R+Q +EG+ I R+N GL+S+
Sbjct: 3 DLLKEFNEQQMKLLSNKEIPKFSSGDTLRVSMKIFDGVSERLQVFEGVCIKRKNNGLHSS 62
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
F +RKISYNE I+ LYSPI+ SI V + G VRRAKLYY+ GKSARIKE+
Sbjct: 63 FTLRKISYNESIQLQVFLYSPIVESIEVIKFGRVRRAKLYYMLSLFGKSARIKER 117
>TIGR_CMR|CJE_0814 [details] [associations]
symbol:CJE_0814 "ribosomal protein L19" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
RefSeq:YP_178818.1 ProteinModelPortal:Q5HV67 STRING:Q5HV67
GeneID:3230764 KEGG:cjr:CJE0814 PATRIC:20043373
HOGENOM:HOG000016264 BioCyc:CJEJ195099:GJC0-829-MONOMER
Uniprot:Q5HV67
Length = 118
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 61/115 (53%), Positives = 80/115 (69%)
Query: 7 IEQEEIIRLK-KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRK 65
IEQ E +++ KN+PDF GDT+ + + + EG + RIQ +EGI I+RR G++ FIVRK
Sbjct: 6 IEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRK 65
Query: 66 ISYNE-GIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEKLLKK 119
I N G+ER F +YS + SI V RRG VRRA+L+YLR GK+ARIKE LKK
Sbjct: 66 IGANNVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDRRGKAARIKE--LKK 118
>TIGR_CMR|APH_1266 [details] [associations]
symbol:APH_1266 "ribosomal protein L19" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001857 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024 KO:K02884
OMA:TLKVHVR ProtClustDB:PRK05338 HOGENOM:HOG000016264
RefSeq:YP_505785.1 ProteinModelPortal:Q2GIL6 STRING:Q2GIL6
GeneID:3931108 KEGG:aph:APH_1266 PATRIC:20951322
BioCyc:APHA212042:GHPM-1269-MONOMER Uniprot:Q2GIL6
Length = 128
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 57/117 (48%), Positives = 82/117 (70%)
Query: 3 LIQKIEQEEI--IRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
L++K ++I +RL N IP+F GDT+ VN+NV +G RIQ +EG+ I +RN+GL+
Sbjct: 4 LLEKFNNKQIEQLRLATNLDIPEFRPGDTVKVNINVFDGVGWRIQTFEGVCIKKRNRGLH 63
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
S+F +RKIS+NE I+ +SP + S+ + R G VRRAKLYYL + GK+ARIKE+
Sbjct: 64 SSFTLRKISHNESIQLQVFTHSPNLKSVELVRTGKVRRAKLYYLLELFGKAARIKER 120
>TIGR_CMR|DET_0338 [details] [associations]
symbol:DET_0338 "ribosomal protein L19" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_181085.1 ProteinModelPortal:Q3Z9L4
STRING:Q3Z9L4 GeneID:3230381 KEGG:det:DET0338 PATRIC:21607745
BioCyc:DETH243164:GJNF-338-MONOMER Uniprot:Q3Z9L4
Length = 136
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 49/98 (50%), Positives = 68/98 (69%)
Query: 17 KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTF 76
K +P F GDTI V+ + EG ++RIQ ++G+V+ + NF VR+ISY G+ERTF
Sbjct: 33 KVLPSFGPGDTIKVHARIKEGDKERIQMFQGVVLKVKQAADGGNFTVRRISYGVGVERTF 92
Query: 77 QLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKE 114
SP ++ + V +RG VRRA+L+YLRK SGK+ARIKE
Sbjct: 93 PFLSPNVTKVEVIKRGRVRRARLFYLRKLSGKAARIKE 130
>TIGR_CMR|NSE_0895 [details] [associations]
symbol:NSE_0895 "ribosomal protein L19" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 OMA:EAKRTLP RefSeq:YP_506761.1
ProteinModelPortal:Q2GCN5 STRING:Q2GCN5 GeneID:3931562
KEGG:nse:NSE_0895 PATRIC:22681781
BioCyc:NSEN222891:GHFU-898-MONOMER Uniprot:Q2GCN5
Length = 120
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 50/118 (42%), Positives = 78/118 (66%)
Query: 1 MNLIQKIE--QEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
M ++ K Q + + +N P+F G T+ V V +GT R Q ++G+ I + NKG++
Sbjct: 1 MGILAKFNEAQRKALSEGRNYPEFRAGYTMSVEFYV-QGTSGRTQVFKGLCIGKSNKGVH 59
Query: 59 SNFIVRKISYNEG-IERTFQLYSPIISSIIVKRRGDVRRAKLYYLRKCSGKSARIKEK 115
S+F +RK+S ++ +ERTF+LY P I SI V+R G VRRAKLYY+R +GK+ RI+++
Sbjct: 60 SSFTLRKLSVHDVYVERTFRLYWPSIKSISVEREGKVRRAKLYYIRALTGKATRIRKE 117
>TAIR|locus:2181975 [details] [associations]
symbol:AT5G11750 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL163814
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
HOGENOM:HOG000016266 TIGRFAMs:TIGR01024 ProtClustDB:CLSN2685510
EMBL:AF375449 EMBL:AY060543 IPI:IPI00521915 PIR:T48534
RefSeq:NP_196736.1 UniGene:At.27374 ProteinModelPortal:Q9LYF5
SMR:Q9LYF5 STRING:Q9LYF5 EnsemblPlants:AT5G11750.1 GeneID:831047
KEGG:ath:AT5G11750 TAIR:At5g11750 InParanoid:Q9LYF5
PhylomeDB:Q9LYF5 Genevestigator:Q9LYF5 Uniprot:Q9LYF5
Length = 229
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/103 (41%), Positives = 62/103 (60%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M ++ K EE+ L++ IP+ G + + + V E R R+ +G+VI+RRN GLNS
Sbjct: 120 MQIVDKEAVEEVRNLRE-IPEIKPGYIVQLKVEVPENKR-RVSIVKGVVIARRNAGLNST 177
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
F +R++ G+E F LYSP + I V + VRRAKLYYLR
Sbjct: 178 FRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLR 220
>TAIR|locus:2032457 [details] [associations]
symbol:AT1G24240 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC002396 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 HOGENOM:HOG000016266
TIGRFAMs:TIGR01024 EMBL:AY044318 EMBL:AY049255 EMBL:AY090278
IPI:IPI00541442 PIR:T00654 RefSeq:NP_564213.1 UniGene:At.33552
UniGene:At.62626 ProteinModelPortal:O48691 SMR:O48691 STRING:O48691
EnsemblPlants:AT1G24240.1 GeneID:839038 KEGG:ath:AT1G24240
TAIR:At1g24240 InParanoid:O48691 PhylomeDB:O48691
ProtClustDB:CLSN2685510 Genevestigator:O48691 Uniprot:O48691
Length = 222
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M ++ K EE+ R + IP+ G + + + V E R R+ +G+VI+RRN GLNS
Sbjct: 113 MQIVDKEAVEEV-RTLREIPEIKPGYIVQLKVEVPENKR-RVSIVKGVVIARRNAGLNST 170
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLRK 104
F +R++ G+E F LYSP + I V + VRRAKLYYLR+
Sbjct: 171 FRIRRLVAGVGVESMFPLYSPNLRVIKVVDKKKVRRAKLYYLRE 214
>TAIR|locus:2139757 [details] [associations]
symbol:AT4G11630 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL161532
EMBL:AL049500 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 HOGENOM:HOG000016266 TIGRFAMs:TIGR01024
UniGene:At.33552 ProtClustDB:CLSN2685510 EMBL:BT012188
EMBL:AK221452 IPI:IPI00535492 PIR:T04210 RefSeq:NP_192900.1
ProteinModelPortal:Q9T0D0 SMR:Q9T0D0 STRING:Q9T0D0
EnsemblPlants:AT4G11630.1 GeneID:826768 KEGG:ath:AT4G11630
TAIR:At4g11630 InParanoid:Q9T0D0 OMA:CGSWSEN PhylomeDB:Q9T0D0
Genevestigator:Q9T0D0 Uniprot:Q9T0D0
Length = 225
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/103 (41%), Positives = 62/103 (60%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M ++ K EE+ L++ IP+ G + + + V E R R+ +G+VI+RRN GLNS
Sbjct: 116 MQIVDKEAVEEVRSLRE-IPEIKPGYIVQLKVEVPENKR-RVSIVKGVVIARRNAGLNST 173
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
F +R++ G+E F LYSP + I V + VRRAKLYYLR
Sbjct: 174 FRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLR 216
>TAIR|locus:2171609 [details] [associations]
symbol:AT5G47190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AB018117 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 HOGENOM:HOG000016266
ProtClustDB:CLSN2689487 TIGRFAMs:TIGR01024 EMBL:AY080626
EMBL:AY117181 EMBL:AY086970 IPI:IPI00525994 RefSeq:NP_568677.1
UniGene:At.29908 ProteinModelPortal:Q8RXX5 SMR:Q8RXX5 STRING:Q8RXX5
PaxDb:Q8RXX5 PRIDE:Q8RXX5 EnsemblPlants:AT5G47190.1 GeneID:834765
KEGG:ath:AT5G47190 GeneFarm:194 TAIR:At5g47190 InParanoid:Q8RXX5
OMA:DIMGLLN PhylomeDB:Q8RXX5 Genevestigator:Q8RXX5
GermOnline:AT5G47190 Uniprot:Q8RXX5
Length = 229
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 41/103 (39%), Positives = 60/103 (58%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M L+ K + E+ + +P TGD + + L V E R R+ Y+GIV+SR+N G+++
Sbjct: 119 MGLLNK-KAIEVAETVRPVPGLRTGDIVEIKLEVPENKR-RLSIYKGIVMSRQNAGIHTT 176
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
+R+I G+E F +YSP I I V VRRA+LYYLR
Sbjct: 177 IRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLR 219
>TAIR|locus:2129186 [details] [associations]
symbol:AT4G17560 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735 EMBL:Z97343
GO:GO:0019843 EMBL:AL161546 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 EMBL:AY062821 EMBL:AY081625
EMBL:AY086121 IPI:IPI00545108 PIR:C71445 RefSeq:NP_567531.1
UniGene:At.27419 ProteinModelPortal:Q8W463 SMR:Q8W463 STRING:Q8W463
PaxDb:Q8W463 PRIDE:Q8W463 EnsemblPlants:AT4G17560.1 GeneID:827471
KEGG:ath:AT4G17560 TAIR:At4g17560 HOGENOM:HOG000016266
InParanoid:Q8W463 OMA:VHTTIRV PhylomeDB:Q8W463
ProtClustDB:CLSN2689487 Genevestigator:Q8W463 GermOnline:AT4G17560
TIGRFAMs:TIGR01024 Uniprot:Q8W463
Length = 225
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 11 EIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNE 70
E+ + +P+ TGD + + L V E R R+ Y+GIV+SR+N G+++ +R+I
Sbjct: 124 EVAEKVRPVPEIRTGDIVEIKLEVPENKR-RLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 182
Query: 71 GIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
G+E F +YSP I I V VRRA+LYYLR
Sbjct: 183 GVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLR 215
>UNIPROTKB|F1NEW6 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AADN02018161
IPI:IPI00592787 Ensembl:ENSGALT00000026999 Uniprot:F1NEW6
Length = 253
Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 7 IEQEEIIRLKK--NIPDFVTGDTIIVNLN--VIEGTRKRIQAYEGIVISRRNKGLNSNFI 62
+E++++I+ +K NIP+F G + V +G R + GI I R +GL + F+
Sbjct: 57 MERKDMIQRRKVFNIPEFYVGSILAVTTADPYADGKTNR---FVGICIQRGGRGLGATFV 113
Query: 63 VRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
+R + ++G+E ++LYSP I I V + L YLR
Sbjct: 114 LRNVIEDQGVEICYELYSPRIQEITVLKLEKRLDDNLTYLR 154
>FB|FBgn0037608 [details] [associations]
symbol:mRpL19 "mitochondrial ribosomal protein L19"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015
EMBL:AE014297 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680 CTD:9801
eggNOG:NOG247570 GeneTree:ENSGT00390000009415 OMA:DLYNPTI
EMBL:AY061413 RefSeq:NP_524284.1 UniGene:Dm.2462
ProteinModelPortal:Q9VHN6 SMR:Q9VHN6 DIP:DIP-23691N
MINT:MINT-996971 STRING:Q9VHN6 PaxDb:Q9VHN6 PRIDE:Q9VHN6
EnsemblMetazoa:FBtr0081901 GeneID:41028 KEGG:dme:Dmel_CG8039
FlyBase:FBgn0037608 InParanoid:Q9VHN6 OrthoDB:EOG4XKSQ1
PhylomeDB:Q9VHN6 GenomeRNAi:41028 NextBio:821796 Bgee:Q9VHN6
GermOnline:CG8039 Uniprot:Q9VHN6
Length = 306
Score = 120 (47.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 2 NLI-QKIEQEEIIRLKKNI--PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
NL+ +K+E+ +++ +K I P+F G + V + K + + GI I+R GL
Sbjct: 79 NLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSR-FVGICINRDRCGLR 137
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
+ FI+R + ++G+E ++LY P I I V R L+YLR
Sbjct: 138 ARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLR 182
>UNIPROTKB|P49406 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 PROSITE:PS01015 EMBL:AC005034 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CleanEx:HS_MRPL15 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
OrthoDB:EOG4G4GR6 EMBL:BC030144 EMBL:D14660 EMBL:AB051621
IPI:IPI00027096 RefSeq:NP_055578.2 UniGene:Hs.44024
ProteinModelPortal:P49406 SMR:P49406 IntAct:P49406
MINT:MINT-6492165 STRING:P49406 PhosphoSite:P49406 DMDM:92090636
PaxDb:P49406 PRIDE:P49406 DNASU:9801 Ensembl:ENST00000393909
Ensembl:ENST00000409374 GeneID:9801 KEGG:hsa:9801 UCSC:uc002snl.3
GeneCards:GC02P075873 HGNC:HGNC:14052 MIM:611832 neXtProt:NX_P49406
PharmGKB:PA30948 InParanoid:P49406 OMA:KRWERPN ChiTaRS:MRPL19
GenomeRNAi:9801 NextBio:36904 ArrayExpress:P49406 Bgee:P49406
CleanEx:HS_MRPL19 Genevestigator:P49406 Uniprot:P49406
Length = 292
Score = 119 (46.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+++++ +K +IP+F G + V + K I + GI I R +GL + FI+
Sbjct: 93 QIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGK-ISQFLGICIQRSGRGLGATFIL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R + +G+E F+LY+P + I V + L YLR
Sbjct: 152 RNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLYLR 191
>UNIPROTKB|F1MMM8 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
IPI:IPI00715557 UniGene:Bt.55433 GeneTree:ENSGT00390000009415
OMA:KRWERPN EMBL:DAAA02031026 Ensembl:ENSBTAT00000003312
Uniprot:F1MMM8
Length = 292
Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+++++ +K +IP+F G + V K Q + GI I R KGL + FI+
Sbjct: 93 QIERKDMLERRKILHIPEFYVGSILRVTTADPYANGKTSQ-FLGICIQRSGKGLGATFIL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I V + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDSLLYLR 191
>UNIPROTKB|Q2HJI0 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 PDB:2FTC PDBsum:2FTC EMBL:BC105368
IPI:IPI00715557 RefSeq:NP_001039533.1 UniGene:Bt.55433
ProteinModelPortal:Q2HJI0 STRING:Q2HJI0 PRIDE:Q2HJI0 GeneID:510957
KEGG:bta:510957 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
InParanoid:Q2HJI0 OrthoDB:EOG4G4GR6 EvolutionaryTrace:Q2HJI0
NextBio:20869701 Uniprot:Q2HJI0
Length = 292
Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+++++ +K +IP+F G + V K Q + GI I R KGL + FI+
Sbjct: 93 QIERKDMLERRKILHIPEFYVGSILRVTTADPYANGKTSQ-FLGICIQRSGKGLGATFIL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I V + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDSLLYLR 191
>ZFIN|ZDB-GENE-040801-55 [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein L19"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
ZFIN:ZDB-GENE-040801-55 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:BX322665 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 IPI:IPI00490324
Ensembl:ENSDART00000124388 ArrayExpress:F1R7V6 Bgee:F1R7V6
Uniprot:F1R7V6
Length = 291
Score = 115 (45.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 7 IEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVR 64
IE++++I+ +K IP+F G + V + + + + GI R KGL + FI+R
Sbjct: 93 IERKDMIQRRKVLQIPEFYVGSILAVTMTDPYASGN-LNRFVGICTQRSGKGLGATFILR 151
Query: 65 KISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
+ +G+E ++LYSP + I V + L YLR
Sbjct: 152 NVIDGQGVEICYELYSPRMRKIEVLKLEKRLDDNLMYLR 190
>UNIPROTKB|E2R077 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
CTD:9801 GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AAEX03010959
RefSeq:XP_532990.2 Ensembl:ENSCAFT00000013000 GeneID:475780
KEGG:cfa:475780 Uniprot:E2R077
Length = 292
Score = 115 (45.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+++++ +K +IP+F G + V + K Q + GI I R GL + FI+
Sbjct: 93 QIERKDMLERRKILHIPEFYVGSILRVTTADLYANGKASQ-FLGICIQRSGAGLGATFIL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I V + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIQEIQVIKLEKRLDDSLLYLR 191
>UNIPROTKB|I3LNJ0 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:FP326655
RefSeq:XP_003354803.1 Ensembl:ENSSSCT00000023158 GeneID:100625069
KEGG:ssc:100625069 Uniprot:I3LNJ0
Length = 292
Score = 115 (45.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+++++ +K +IP+F G + V + K Q + GI I R GL + FI+
Sbjct: 93 QIERKDMLERRKILHIPEFYVGSILRVTTADPYASAKTSQ-FLGICIQRSGSGLGATFIL 151
Query: 64 RKISYNEGIERTFQLYSPIISSI-IVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I +VK + + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDNS-LLYLR 191
>MGI|MGI:1926274 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005761 "mitochondrial ribosome" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=ISO] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015 MGI:MGI:1926274
GO:GO:0006412 GO:GO:0031965 GO:GO:0003735 GO:GO:0005761
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CTD:9801 HOVERGEN:HBG023932 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AK018508
EMBL:AK050637 EMBL:BC020315 EMBL:BC043921 IPI:IPI00989172
RefSeq:NP_080766.1 UniGene:Mm.276293 ProteinModelPortal:Q9D338
SMR:Q9D338 STRING:Q9D338 PhosphoSite:Q9D338 PaxDb:Q9D338
PRIDE:Q9D338 Ensembl:ENSMUST00000032124 GeneID:56284 KEGG:mmu:56284
UCSC:uc009clf.1 InParanoid:Q9D338 NextBio:312188 Bgee:Q9D338
CleanEx:MM_MRPL19 Genevestigator:Q9D338
GermOnline:ENSMUSG00000030045 Uniprot:Q9D338
Length = 292
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
KIE+++++ +K IP+F G + V + K Q + GI I R GL + F +
Sbjct: 93 KIERKDMLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQ-FLGICIKRSGNGLGATFTL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I V + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDNLLYLR 191
>RGD|1587381 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA;ISO]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 RGD:1587381
GO:GO:0005739 GO:GO:0006412 GO:GO:0031965 GO:GO:0005840
GO:GO:0003735 EMBL:CH473957 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR15680 CTD:9801 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 IPI:IPI00190232 RefSeq:NP_001025069.1
UniGene:Rn.3438 Ensembl:ENSRNOT00000009308 GeneID:297372
KEGG:rno:297372 UCSC:RGD:1587381 Uniprot:D4A4A9
Length = 292
Score = 101 (40.6 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 6 KIEQEEIIRLKK--NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63
+IE+ +++ +K IP+F G + V + K Q + GI I R GL + F +
Sbjct: 93 QIERRDMLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQ-FLGICIKRSGSGLGATFTL 151
Query: 64 RKISYNEGIERTFQLYSPIISSIIVKRRGDVRRAKLYYLR 103
R +G+E F+LY+P I I V + L YLR
Sbjct: 152 RNTIEGQGVEICFELYNPRIHEIQVVKLEKRLDDSLLYLR 191
>WB|WBGene00022470 [details] [associations]
symbol:mrpl-19 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015 GO:GO:0005739
GO:GO:0009792 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
HOGENOM:HOG000020439 EMBL:FO080992 RefSeq:NP_491381.1
ProteinModelPortal:Q95Y83 SMR:Q95Y83 STRING:Q95Y83 PaxDb:Q95Y83
EnsemblMetazoa:Y119C1B.4 GeneID:172052 KEGG:cel:CELE_Y119C1B.4
UCSC:Y119C1B.4 CTD:172052 WormBase:Y119C1B.4 eggNOG:NOG247570
GeneTree:ENSGT00390000009415 InParanoid:Q95Y83 OMA:DLYNPTI
NextBio:873823 Uniprot:Q95Y83
Length = 288
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 3 LIQKIEQEEIIRLKKNI--PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
L +++E+++++ + NI P+F G + V + + + + GI I R +GL
Sbjct: 64 LKEELERQDMLERRMNIDIPEFYVGSIVAVTSSD-KNLGSKEHRFVGICIRREKEGLLHQ 122
Query: 61 FIVRKISYNEGIERTFQLYSPIISSI 86
F +R N G+E + LY+P I I
Sbjct: 123 FTLRNTIENIGVEVVYDLYNPTIKKI 148
>POMBASE|SPAC343.02 [details] [associations]
symbol:img1 "mitochondrial ribosomal protein subunit L19
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PomBase:SPAC343.02
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 InterPro:IPR008991 SUPFAM:SSF50104 PIR:T38651
RefSeq:NP_593422.1 ProteinModelPortal:Q9UT87 STRING:Q9UT87
EnsemblFungi:SPAC343.02.1 GeneID:2543125 KEGG:spo:SPAC343.02
eggNOG:COG0335 OrthoDB:EOG4004V1 NextBio:20804152 PANTHER:PTHR15680
Uniprot:Q9UT87
Length = 182
Score = 93 (37.8 bits), Expect = 0.00017, P = 0.00017
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 8 EQEEIIRL-KKNIPDFVT-GDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRK 65
EQ E ++ ++ P+ V G ++V ++ + + G ++ R++G S+ ++R
Sbjct: 57 EQSERFKMFHRSQPNRVRPGAVLLVESYSKYPSKDSVNRFAGYLLRIRHRGPKSSILLRN 116
Query: 66 ISYNEGIERTFQLYSPIISSIIVKRRGDV----RRAKLYYLRKCSGKSARIKEKLLKK 119
+ G+E +YSP I I+V + + RRA L YLR+ + + E L++K
Sbjct: 117 VVMGVGVEYLLPIYSPQIKRIVVLKENGLSKRPRRAYLSYLRQPRFRLPPV-ESLVRK 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 119 119 0.00091 102 3 11 22 0.46 30
29 0.47 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 471 (50 KB)
Total size of DFA: 90 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.84u 0.08s 12.92t Elapsed: 00:00:12
Total cpu time: 12.84u 0.08s 12.92t Elapsed: 00:00:12
Start: Thu Aug 15 11:17:22 2013 End: Thu Aug 15 11:17:34 2013