Query psy3774
Match_columns 963
No_of_seqs 345 out of 2785
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 16:58:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h8g_F Cytosol aminopeptidase; 100.0 1E-142 5E-147 1224.5 51.9 491 458-958 1-496 (497)
2 3jru_B Probable cytosol aminop 100.0 2E-142 7E-147 1219.9 52.5 486 456-957 1-489 (490)
3 1gyt_A Cytosol aminopeptidase; 100.0 4E-142 1E-146 1230.8 51.3 493 458-959 1-499 (503)
4 3pei_A Cytosol aminopeptidase; 100.0 7E-141 2E-145 1206.0 39.6 482 457-962 1-485 (486)
5 3kzw_A Cytosol aminopeptidase; 100.0 3E-139 9E-144 1192.2 49.8 484 456-956 23-515 (515)
6 3kr4_A M17 leucyl aminopeptida 100.0 8E-138 3E-142 1178.8 49.1 475 470-957 36-521 (528)
7 1lam_A Leucine aminopeptidase; 100.0 1E-135 5E-140 1168.7 44.1 456 477-957 2-483 (484)
8 3h8g_F Cytosol aminopeptidase; 100.0 9E-128 3E-132 1102.5 43.7 441 3-448 13-483 (497)
9 3jru_B Probable cytosol aminop 100.0 2E-127 7E-132 1096.3 44.5 435 3-448 15-477 (490)
10 1gyt_A Cytosol aminopeptidase; 100.0 1E-127 5E-132 1109.7 42.3 441 4-448 14-485 (503)
11 3ij3_A Cytosol aminopeptidase; 100.0 1E-126 4E-131 1079.0 34.7 422 498-956 55-480 (482)
12 3pei_A Cytosol aminopeptidase; 100.0 7E-126 2E-130 1082.6 33.5 429 3-448 12-467 (486)
13 3kzw_A Cytosol aminopeptidase; 100.0 1E-124 5E-129 1070.9 41.1 436 3-448 35-504 (515)
14 3kr4_A M17 leucyl aminopeptida 100.0 2E-124 7E-129 1068.6 41.9 441 2-448 39-512 (528)
15 1lam_A Leucine aminopeptidase; 100.0 5E-123 2E-127 1064.7 37.9 427 5-448 1-471 (484)
16 2hc9_A Leucine aminopeptidase 100.0 1E-119 5E-124 1030.1 37.5 454 473-959 15-486 (491)
17 3ij3_A Cytosol aminopeptidase; 100.0 2E-116 5E-121 996.7 34.5 399 27-447 55-468 (482)
18 4efd_A Aminopeptidase; structu 100.0 4E-116 1E-120 997.2 36.5 412 523-956 94-522 (522)
19 2hc9_A Leucine aminopeptidase 100.0 3E-111 9E-116 962.0 34.2 425 3-449 16-476 (491)
20 4efd_A Aminopeptidase; structu 100.0 1E-107 4E-112 927.7 29.2 311 136-450 197-516 (522)
21 4h2k_A Succinyl-diaminopimelat 91.2 1.3 4.6E-05 46.9 12.0 117 143-284 6-138 (269)
22 4h2k_A Succinyl-diaminopimelat 90.7 1.5 5.1E-05 46.5 11.8 117 640-782 6-139 (269)
23 3rza_A Tripeptidase; phosphory 90.0 1.4 4.7E-05 49.3 11.3 129 643-781 27-163 (396)
24 1cg2_A Carboxypeptidase G2; me 89.4 2.5 8.4E-05 47.1 12.7 121 640-782 19-155 (393)
25 1cg2_A Carboxypeptidase G2; me 89.1 2.3 8E-05 47.2 12.3 125 143-284 19-154 (393)
26 3pfo_A Putative acetylornithin 88.8 3.3 0.00011 46.5 13.4 124 640-782 26-180 (433)
27 3khx_A Putative dipeptidase sa 88.3 1.8 6.2E-05 50.1 11.0 113 640-782 34-174 (492)
28 3ct9_A Acetylornithine deacety 88.0 4.7 0.00016 44.3 13.7 122 641-782 12-139 (356)
29 3gb0_A Peptidase T; NP_980509. 88.0 4.2 0.00014 44.7 13.4 129 145-284 8-142 (373)
30 3t68_A Succinyl-diaminopimelat 87.4 1.1 3.7E-05 47.5 7.7 115 642-782 8-139 (268)
31 3gb0_A Peptidase T; NP_980509. 86.8 6 0.0002 43.5 13.6 129 642-781 8-142 (373)
32 2pok_A Peptidase, M20/M25/M40 86.6 4.4 0.00015 46.4 12.8 117 641-781 45-182 (481)
33 3tx8_A Succinyl-diaminopimelat 86.0 4 0.00014 44.8 11.7 120 642-783 15-139 (369)
34 1vhe_A Aminopeptidase/glucanas 86.0 9.2 0.00031 42.4 14.7 62 642-711 9-70 (373)
35 3pfo_A Putative acetylornithin 85.9 4.8 0.00016 45.2 12.5 129 143-284 26-179 (433)
36 3ct9_A Acetylornithine deacety 85.9 7.4 0.00025 42.7 13.7 122 144-284 12-138 (356)
37 3khx_A Putative dipeptidase sa 85.8 2.9 0.0001 48.3 10.8 113 143-284 34-173 (492)
38 1lfw_A PEPV; hydrolase, dipept 85.5 5.5 0.00019 45.3 12.8 120 144-284 15-154 (470)
39 1lfw_A PEPV; hydrolase, dipept 84.9 7.7 0.00026 44.1 13.7 116 641-781 15-154 (470)
40 1q7l_A Aminoacylase-1; catalys 84.7 3.9 0.00013 41.2 9.9 126 146-284 13-148 (198)
41 1q7l_A Aminoacylase-1; catalys 84.1 5.2 0.00018 40.3 10.6 125 642-781 12-148 (198)
42 1vhe_A Aminopeptidase/glucanas 84.0 6.1 0.00021 43.9 12.0 62 145-214 9-70 (373)
43 2zog_A Cytosolic non-specific 83.4 11 0.00038 42.8 14.2 130 640-781 20-171 (479)
44 3rza_A Tripeptidase; phosphory 83.1 3.5 0.00012 45.9 9.6 130 145-284 26-163 (396)
45 3isz_A Succinyl-diaminopimelat 82.7 5.3 0.00018 43.6 10.7 116 642-783 5-137 (377)
46 1xmb_A IAA-amino acid hydrolas 82.3 6.5 0.00022 44.2 11.5 119 641-781 29-152 (418)
47 1vgy_A Succinyl-diaminopimelat 82.1 6.4 0.00022 43.7 11.3 116 642-783 8-140 (393)
48 2gre_A Deblocking aminopeptida 81.9 8.5 0.00029 42.2 12.0 63 144-214 7-69 (349)
49 1fno_A Peptidase T; metallo pe 81.7 12 0.00039 41.9 13.3 132 643-782 5-175 (417)
50 3isz_A Succinyl-diaminopimelat 81.7 4.7 0.00016 44.1 9.8 114 145-284 5-135 (377)
51 1vgy_A Succinyl-diaminopimelat 81.3 5.6 0.00019 44.1 10.4 126 145-285 8-139 (393)
52 2zog_A Cytosolic non-specific 81.0 13 0.00044 42.3 13.5 129 143-284 20-171 (479)
53 2pok_A Peptidase, M20/M25/M40 80.8 8.2 0.00028 44.1 11.9 117 144-284 45-182 (481)
54 2gre_A Deblocking aminopeptida 80.4 9.7 0.00033 41.7 11.8 62 642-711 8-69 (349)
55 3tx8_A Succinyl-diaminopimelat 79.2 6.8 0.00023 42.9 10.1 119 145-284 15-137 (369)
56 1fno_A Peptidase T; metallo pe 78.9 16 0.00055 40.7 13.2 131 146-284 5-174 (417)
57 3ife_A Peptidase T; metallopep 78.5 19 0.00066 40.5 13.8 137 641-785 28-205 (434)
58 1xmb_A IAA-amino acid hydrolas 77.5 8.4 0.00029 43.3 10.4 120 143-284 28-152 (418)
59 1ysj_A Protein YXEP; M20 famil 77.3 12 0.0004 41.8 11.4 121 641-782 33-159 (404)
60 3dlj_A Beta-Ala-His dipeptidas 77.0 23 0.0008 40.5 14.1 129 640-782 25-179 (485)
61 1ysj_A Protein YXEP; M20 famil 75.4 20 0.00067 40.0 12.6 120 144-284 33-158 (404)
62 3dlj_A Beta-Ala-His dipeptidas 75.2 10 0.00034 43.5 10.4 129 143-285 25-179 (485)
63 2fvg_A Endoglucanase; TM1049, 74.0 5.4 0.00019 43.6 7.4 59 148-214 3-61 (340)
64 3ife_A Peptidase T; metallopep 73.6 34 0.0012 38.4 14.1 133 144-284 28-201 (434)
65 2fvg_A Endoglucanase; TM1049, 72.9 7.6 0.00026 42.4 8.3 59 645-711 3-61 (340)
66 1y0y_A FRV operon protein FRVX 72.7 9.9 0.00034 41.7 9.1 59 643-711 9-68 (353)
67 3pfe_A Succinyl-diaminopimelat 71.9 15 0.0005 42.0 10.7 127 144-284 19-164 (472)
68 3pfe_A Succinyl-diaminopimelat 71.5 27 0.00094 39.8 12.8 126 641-781 19-164 (472)
69 3t68_A Succinyl-diaminopimelat 71.3 10 0.00035 39.9 8.5 114 145-284 8-138 (268)
70 3n5f_A L-carbamoylase, N-carba 70.8 22 0.00074 39.6 11.5 105 643-781 8-125 (408)
71 1vho_A Endoglucanase; structur 70.3 31 0.0011 37.5 12.4 61 643-712 8-68 (346)
72 1vho_A Endoglucanase; structur 68.9 34 0.0012 37.1 12.3 61 146-215 8-68 (346)
73 3n5f_A L-carbamoylase, N-carba 65.5 32 0.0011 38.2 11.5 105 146-284 8-125 (408)
74 3io1_A Aminobenzoyl-glutamate 65.3 41 0.0014 38.0 12.5 134 640-781 14-185 (445)
75 1y0y_A FRV operon protein FRVX 64.3 14 0.00047 40.6 8.0 59 146-214 9-68 (353)
76 2rb7_A Peptidase, M20/M25/M40 64.3 5.7 0.00019 43.7 4.9 118 144-284 7-140 (364)
77 1z2l_A Allantoate amidohydrola 63.5 22 0.00074 39.7 9.6 107 642-782 11-130 (423)
78 3r68_A Na(+)/H(+) exchange reg 62.4 3.4 0.00012 36.2 2.2 25 779-803 37-62 (95)
79 1ylo_A Hypothetical protein SF 60.1 40 0.0014 36.4 10.8 60 644-712 7-66 (348)
80 2wyr_A Cobalt-activated peptid 58.7 27 0.00093 37.7 9.1 58 146-214 5-62 (332)
81 1ylo_A Hypothetical protein SF 58.2 59 0.002 35.1 11.7 60 147-215 7-66 (348)
82 3io1_A Aminobenzoyl-glutamate 57.4 59 0.002 36.7 11.9 134 143-284 14-185 (445)
83 2dkr_A LIN-7 homolog B; LIN-7B 57.1 7.6 0.00026 33.8 3.5 26 281-306 37-64 (93)
84 2rb7_A Peptidase, M20/M25/M40 56.7 10 0.00034 41.7 5.2 116 641-781 7-140 (364)
85 2dkr_A LIN-7 homolog B; LIN-7B 55.5 7.6 0.00026 33.8 3.2 25 779-803 38-64 (93)
86 2wyr_A Cobalt-activated peptid 54.3 30 0.001 37.3 8.5 58 643-711 5-62 (332)
87 1z2l_A Allantoate amidohydrola 53.4 32 0.0011 38.3 8.7 107 145-285 11-130 (423)
88 1tkj_A Aminopeptidase, SGAP; d 52.1 30 0.001 36.7 7.9 94 661-781 36-132 (284)
89 2v8h_A Beta-alanine synthase; 51.5 45 0.0015 38.0 9.7 87 661-781 71-159 (474)
90 3r68_A Na(+)/H(+) exchange reg 51.0 7.8 0.00027 33.9 2.6 25 282-306 37-62 (95)
91 2kjp_A Uncharacterized protein 48.4 7.4 0.00025 34.5 2.0 26 778-803 8-33 (91)
92 2dx6_A Hypothetical protein TT 48.2 2E+02 0.0068 27.8 14.3 127 458-592 2-132 (159)
93 1tkj_A Aminopeptidase, SGAP; d 47.7 35 0.0012 36.2 7.5 94 163-283 35-131 (284)
94 3ram_A HMRA protein; two-domai 47.4 73 0.0025 35.3 10.4 111 640-781 16-129 (394)
95 2dls_A PDZ-rhogef, RHO guanine 47.1 13 0.00044 32.6 3.4 26 778-803 36-62 (93)
96 2hga_A Conserved protein MTH13 45.4 10 0.00036 35.7 2.6 27 777-803 31-57 (125)
97 2d90_A PDZ domain containing p 42.7 13 0.00044 33.1 2.6 27 777-803 36-63 (102)
98 2dls_A PDZ-rhogef, RHO guanine 41.9 15 0.00053 32.1 3.0 27 280-306 35-62 (93)
99 3ram_A HMRA protein; two-domai 41.6 94 0.0032 34.4 10.1 111 143-284 16-129 (394)
100 2hga_A Conserved protein MTH13 41.1 13 0.00043 35.1 2.4 27 280-306 31-57 (125)
101 2kjp_A Uncharacterized protein 41.1 11 0.00036 33.5 1.8 26 281-306 8-33 (91)
102 3kh6_A Poly [ADP-ribose] polym 41.1 2.4E+02 0.0081 28.7 12.1 122 458-593 33-157 (199)
103 2f7v_A Aectylcitrulline deacet 40.9 69 0.0024 34.9 8.8 108 642-782 11-135 (369)
104 3i18_A LMO2051 protein; alpha- 40.8 12 0.00041 33.4 2.1 27 777-803 13-39 (100)
105 2eaq_A LIM domain only protein 40.8 8.7 0.0003 33.3 1.2 25 779-803 36-61 (90)
106 2v8h_A Beta-alanine synthase; 40.4 66 0.0023 36.6 8.8 87 163-284 70-159 (474)
107 3bpu_A Membrane-associated gua 40.0 18 0.0006 31.2 3.0 24 780-803 35-58 (88)
108 3mru_A Aminoacyl-histidine dip 39.5 65 0.0022 37.0 8.6 62 146-215 17-82 (490)
109 2jxo_A Ezrin-radixin-moesin-bi 39.1 7.1 0.00024 34.5 0.3 26 778-803 40-66 (98)
110 2kv8_A RGS12, regulator of G-p 39.0 16 0.00053 31.1 2.5 25 779-803 31-56 (83)
111 2pkt_A PDZ and LIM domain prot 38.7 8.9 0.0003 33.3 0.9 26 778-803 34-60 (91)
112 4abl_A Poly [ADP-ribose] polym 38.4 3.1E+02 0.011 27.3 13.5 142 458-622 22-166 (183)
113 2kl1_A YLBL protein; structure 38.3 12 0.0004 33.2 1.6 26 778-803 12-37 (94)
114 2eaq_A LIM domain only protein 37.8 9.9 0.00034 32.9 1.1 26 281-306 35-61 (90)
115 2v90_A PDZ domain-containing p 37.6 8.6 0.00029 33.8 0.6 26 778-803 37-63 (96)
116 2uzc_A Human pdlim5, PDZ and L 37.4 9.6 0.00033 32.8 0.9 25 779-803 35-60 (88)
117 1yd9_A Core histone macro-H2A. 37.4 3.3E+02 0.011 27.3 12.7 131 455-593 16-155 (193)
118 2pa1_A PDZ and LIM domain prot 37.3 9.3 0.00032 32.9 0.8 25 779-803 34-59 (87)
119 2qyv_A XAA-His dipeptidase; YP 36.8 1.4E+02 0.0049 33.8 10.9 62 642-711 13-77 (487)
120 2edz_A PDZ domain-containing p 36.5 12 0.00041 34.1 1.4 27 777-803 44-71 (114)
121 3q6z_A Poly [ADP-ribose] polym 36.4 3.7E+02 0.013 27.5 16.9 148 458-622 37-197 (214)
122 3i18_A LMO2051 protein; alpha- 36.3 13 0.00044 33.2 1.6 28 279-306 12-39 (100)
123 2pzd_A Serine protease HTRA2; 35.9 9.3 0.00032 34.7 0.6 26 778-803 42-68 (113)
124 2d90_A PDZ domain containing p 35.7 18 0.00063 32.0 2.5 27 280-306 36-63 (102)
125 2qyv_A XAA-His dipeptidase; YP 35.6 79 0.0027 36.0 8.5 63 145-215 13-79 (487)
126 2i6v_A General secretion pathw 35.4 12 0.0004 32.5 1.1 25 779-803 24-52 (87)
127 2l97_A HTRA, putative serine p 35.4 19 0.00066 34.0 2.7 29 775-803 61-89 (134)
128 3bpu_A Membrane-associated gua 35.4 20 0.0007 30.7 2.7 25 282-306 34-58 (88)
129 1x5n_A Harmonin; PDZ domain, u 35.0 25 0.00087 31.8 3.4 32 769-803 42-74 (114)
130 1mfg_A ERB-B2 interacting prot 34.9 29 0.001 30.2 3.7 26 778-803 42-67 (95)
131 3id1_A Regulator of sigma E pr 34.6 10 0.00034 33.7 0.6 25 779-803 10-35 (95)
132 2w4f_A Protein LAP4; structura 34.3 9.4 0.00032 33.5 0.3 32 769-803 35-67 (97)
133 3mru_A Aminoacyl-histidine dip 34.1 1.2E+02 0.0042 34.6 9.8 61 643-711 17-80 (490)
134 2jxo_A Ezrin-radixin-moesin-bi 33.9 10 0.00035 33.4 0.5 27 280-306 39-66 (98)
135 2v90_A PDZ domain-containing p 33.8 9.7 0.00033 33.4 0.3 27 280-306 36-63 (96)
136 1g9o_A NHE-RF; PDZ domain, com 33.8 12 0.00041 32.4 0.9 25 779-803 35-60 (91)
137 3gux_A Putative Zn-dependent e 33.7 1.4E+02 0.0046 32.5 9.5 123 147-284 31-162 (314)
138 2pkt_A PDZ and LIM domain prot 33.4 13 0.00044 32.3 1.1 27 280-306 33-60 (91)
139 2uzc_A Human pdlim5, PDZ and L 33.4 11 0.00037 32.5 0.6 26 281-306 34-60 (88)
140 2kl1_A YLBL protein; structure 33.2 14 0.00046 32.8 1.2 26 281-306 12-37 (94)
141 2kv8_A RGS12, regulator of G-p 33.1 19 0.00064 30.6 2.1 26 281-306 30-56 (83)
142 2ego_A General receptor for ph 33.0 12 0.00042 32.9 0.9 25 779-803 45-70 (96)
143 3tc8_A Leucine aminopeptidase; 33.0 1.1E+02 0.0037 33.1 8.6 107 163-284 48-160 (309)
144 2i4s_A General secretion pathw 33.0 13 0.00046 33.4 1.1 25 779-803 42-70 (105)
145 1qav_A Alpha-1 syntrophin (res 32.9 11 0.00039 32.6 0.6 27 777-803 36-64 (90)
146 2p3w_A Probable serine proteas 32.3 11 0.00039 34.1 0.5 26 778-803 42-68 (112)
147 2pzd_A Serine protease HTRA2; 32.2 11 0.00037 34.3 0.3 27 280-306 41-68 (113)
148 2q3g_A PDZ and LIM domain prot 31.9 13 0.00043 32.2 0.7 24 780-803 36-60 (89)
149 1vb7_A PDZ and LIM domain 2; P 31.8 8.8 0.0003 33.7 -0.3 25 779-803 38-63 (94)
150 1mfg_A ERB-B2 interacting prot 31.7 31 0.001 30.1 3.3 27 280-306 41-67 (95)
151 2pa1_A PDZ and LIM domain prot 31.6 14 0.00047 31.8 0.9 27 280-306 32-59 (87)
152 3cyy_A Tight junction protein 31.2 14 0.00048 31.9 0.9 25 779-803 31-57 (92)
153 1wh1_A KIAA1095 protein; PDZ d 31.1 13 0.00044 34.6 0.7 31 770-803 50-82 (124)
154 2h2b_A Tight junction protein 30.8 31 0.0011 30.7 3.2 26 778-803 46-71 (107)
155 2l97_A HTRA, putative serine p 30.8 23 0.0008 33.4 2.5 28 279-306 62-89 (134)
156 2cs5_A Tyrosine-protein phosph 30.7 28 0.00096 31.8 3.0 29 775-803 45-76 (119)
157 1ihj_A INAD; intermolecular di 30.7 12 0.0004 33.0 0.3 27 777-803 43-71 (98)
158 2eeh_A PDZ domain-containing p 30.4 12 0.00042 33.1 0.4 32 769-803 37-69 (100)
159 2f7v_A Aectylcitrulline deacet 29.9 93 0.0032 33.8 7.6 62 145-215 11-77 (369)
160 1v5l_A PDZ and LIM domain 3; a 29.9 19 0.00064 32.1 1.5 26 778-803 36-62 (103)
161 2edz_A PDZ domain-containing p 29.8 14 0.00049 33.6 0.8 27 280-306 44-71 (114)
162 3gux_A Putative Zn-dependent e 29.7 1.3E+02 0.0043 32.7 8.4 34 748-781 128-162 (314)
163 3id1_A Regulator of sigma E pr 29.7 12 0.00042 33.2 0.2 26 281-306 9-35 (95)
164 2yuy_A RHO GTPase activating p 29.5 5.8 0.0002 37.1 -2.0 81 200-306 2-94 (126)
165 1spv_A Putative polyprotein/ph 29.4 4.3E+02 0.015 26.2 13.4 127 457-592 2-140 (184)
166 1x5n_A Harmonin; PDZ domain, u 29.3 30 0.001 31.3 2.9 27 280-306 47-74 (114)
167 1uep_A Membrane associated gua 29.1 27 0.00091 31.1 2.4 32 769-803 35-68 (103)
168 2w4f_A Protein LAP4; structura 29.0 14 0.00047 32.4 0.5 27 280-306 40-67 (97)
169 2he4_A Na(+)/H(+) exchange reg 28.9 13 0.00045 32.1 0.3 25 779-803 36-61 (90)
170 2yt7_A Amyloid beta A4 precurs 28.8 32 0.0011 30.5 2.9 30 774-803 40-71 (101)
171 1g9o_A NHE-RF; PDZ domain, com 28.7 17 0.00059 31.4 1.1 26 281-306 34-60 (91)
172 2rcz_A Tight junction protein 28.6 36 0.0012 28.3 3.0 16 788-803 40-55 (81)
173 2ego_A General receptor for ph 28.4 17 0.00059 31.9 1.0 27 280-306 43-70 (96)
174 2qkv_A Inactivation-NO-after-p 28.2 18 0.0006 31.9 1.0 26 778-803 38-65 (96)
175 2jil_A GRIP1 protein, glutamat 27.9 15 0.0005 32.2 0.5 27 777-803 38-66 (97)
176 2vwr_A Ligand of NUMB protein 27.8 14 0.00048 32.3 0.3 25 779-803 37-63 (95)
177 1x5q_A LAP4 protein; PDZ domai 27.8 14 0.00048 33.3 0.3 31 770-803 48-79 (110)
178 2p3w_A Probable serine proteas 27.7 14 0.00048 33.5 0.3 27 280-306 41-68 (112)
179 2i6v_A General secretion pathw 27.7 20 0.00069 31.0 1.3 26 281-306 23-52 (87)
180 1uez_A KIAA1526 protein; PDZ d 27.5 13 0.00045 32.9 0.1 32 769-803 36-68 (101)
181 2vsp_A PDZ domain-containing p 27.4 11 0.00038 32.8 -0.5 24 780-803 36-60 (91)
182 3cyy_A Tight junction protein 27.4 16 0.00054 31.6 0.6 26 281-306 30-57 (92)
183 1qav_A Alpha-1 syntrophin (res 27.3 17 0.0006 31.3 0.8 27 280-306 36-64 (90)
184 2q3g_A PDZ and LIM domain prot 27.3 14 0.00049 31.8 0.3 25 282-306 35-60 (89)
185 2qg1_A Multiple PDZ domain pro 27.2 18 0.0006 31.4 0.8 16 788-803 48-63 (92)
186 1wh1_A KIAA1095 protein; PDZ d 27.1 14 0.00049 34.2 0.3 27 280-306 54-82 (124)
187 2eeh_A PDZ domain-containing p 27.1 14 0.00047 32.8 0.1 26 281-306 43-69 (100)
188 2h2b_A Tight junction protein 26.9 36 0.0012 30.2 3.0 27 280-306 45-71 (107)
189 2fcf_A Multiple PDZ domain pro 26.6 15 0.00053 32.5 0.3 26 778-803 46-73 (103)
190 2ehr_A INAD-like protein; PDZ 26.6 41 0.0014 30.6 3.3 32 769-803 51-84 (117)
191 1ihj_A INAD; intermolecular di 26.2 17 0.00056 32.0 0.5 27 280-306 43-71 (98)
192 3qik_A Phosphatidylinositol 3, 26.2 12 0.0004 34.5 -0.5 29 778-806 46-75 (101)
193 2vz5_A TAX1-binding protein 3; 25.9 16 0.00054 34.9 0.3 32 769-803 65-97 (139)
194 2opg_A Multiple PDZ domain pro 25.8 16 0.00055 32.0 0.3 25 779-803 38-64 (98)
195 2he4_A Na(+)/H(+) exchange reg 25.8 14 0.00049 31.9 -0.0 24 282-305 36-60 (90)
196 2i4s_A General secretion pathw 25.7 23 0.00077 31.9 1.3 25 282-306 42-70 (105)
197 3tc8_A Leucine aminopeptidase; 25.6 1.9E+02 0.0063 31.2 8.8 34 748-781 126-160 (309)
198 2yt7_A Amyloid beta A4 precurs 25.5 34 0.0012 30.3 2.5 45 278-330 41-87 (101)
199 1ujv_A Membrane associated gua 25.3 27 0.00093 30.8 1.8 30 770-803 34-63 (96)
200 2q9v_A Membrane-associated gua 25.1 19 0.00064 31.1 0.6 25 779-803 35-61 (90)
201 2i04_A Membrane-associated gua 25.1 17 0.00058 31.0 0.3 24 780-803 34-59 (85)
202 2qkv_A Inactivation-NO-after-p 24.8 23 0.0008 31.1 1.2 27 280-306 37-65 (96)
203 2i1n_A Discs, large homolog 3; 24.8 18 0.00062 32.0 0.5 25 779-803 42-68 (102)
204 2jil_A GRIP1 protein, glutamat 24.8 16 0.00055 32.0 0.1 27 280-306 38-66 (97)
205 2fe5_A Presynaptic protein SAP 24.8 17 0.00059 31.5 0.3 16 788-803 52-67 (94)
206 1x5q_A LAP4 protein; PDZ domai 24.7 15 0.00053 33.0 -0.0 26 281-306 53-79 (110)
207 1vb7_A PDZ and LIM domain 2; P 24.6 14 0.00046 32.5 -0.4 26 281-306 37-63 (94)
208 1v5l_A PDZ and LIM domain 3; a 24.4 23 0.00079 31.5 1.1 26 281-306 36-62 (103)
209 3khf_A Microtubule-associated 24.4 18 0.00061 31.9 0.3 25 779-803 42-67 (99)
210 2cs5_A Tyrosine-protein phosph 24.4 40 0.0014 30.7 2.8 29 278-306 45-76 (119)
211 1y8t_A Hypothetical protein RV 24.2 50 0.0017 35.6 3.9 27 777-803 248-275 (324)
212 2zpm_A Regulator of sigma E pr 24.1 29 0.00098 29.9 1.6 25 779-803 12-37 (91)
213 2la8_A Inactivation-NO-after-p 24.1 20 0.00067 32.5 0.6 27 777-803 31-59 (106)
214 2fcf_A Multiple PDZ domain pro 24.1 17 0.00057 32.3 0.1 27 280-306 45-73 (103)
215 1uez_A KIAA1526 protein; PDZ d 24.0 15 0.00052 32.5 -0.2 25 282-306 43-68 (101)
216 1uep_A Membrane associated gua 24.0 38 0.0013 30.1 2.5 26 281-306 41-68 (103)
217 3ngh_A PDZ domain-containing p 23.9 16 0.00053 32.7 -0.2 25 779-803 34-59 (106)
218 2koj_A Partitioning defective 23.7 18 0.00063 32.5 0.3 32 769-803 40-73 (111)
219 1n7t_A 99-MER peptide of densi 23.7 35 0.0012 30.2 2.1 26 778-803 50-75 (103)
220 2yub_A LIMK-2, LIM domain kina 23.5 19 0.00066 33.4 0.4 23 781-803 56-79 (118)
221 2vwr_A Ligand of NUMB protein 23.5 20 0.00068 31.3 0.5 27 280-306 35-63 (95)
222 2vsv_A Rhophilin-2; scaffold p 23.5 20 0.00067 33.0 0.4 24 780-803 53-77 (109)
223 1te0_A Protease DEGS; two doma 23.3 48 0.0016 35.7 3.6 28 776-803 249-277 (318)
224 2edp_A Fragment, shroom family 23.2 14 0.00048 32.9 -0.6 26 778-803 42-69 (100)
225 1v5q_A GRIP1 homolog, glutamat 23.1 18 0.00062 33.4 0.1 33 768-803 45-79 (122)
226 2k52_A Uncharacterized protein 22.9 48 0.0016 28.4 2.8 38 771-815 28-68 (80)
227 2edv_A FERM and PDZ domain-con 22.9 30 0.001 30.5 1.5 26 778-803 38-63 (96)
228 2q9v_A Membrane-associated gua 22.9 21 0.00072 30.7 0.5 26 281-306 34-61 (90)
229 1v1h_A Fibritin, fiber protein 22.6 23 0.00079 32.6 0.7 27 227-256 43-70 (103)
230 2rcz_A Tight junction protein 22.5 55 0.0019 27.1 3.1 16 291-306 40-55 (81)
231 1rgw_A ZAsp protein; PDZ, cyph 22.4 29 0.00098 29.4 1.3 32 769-803 26-58 (85)
232 2ehr_A INAD-like protein; PDZ 22.4 45 0.0015 30.3 2.7 27 280-306 56-84 (117)
233 3sfj_A TAX1-binding protein 3; 22.4 21 0.0007 31.7 0.3 26 778-803 52-78 (104)
234 1rgw_A ZAsp protein; PDZ, cyph 22.3 18 0.00061 30.8 -0.1 24 283-306 34-58 (85)
235 2vz5_A TAX1-binding protein 3; 22.0 22 0.00075 33.9 0.5 27 280-306 70-97 (139)
236 2kjd_A Sodium/hydrogen exchang 22.0 21 0.00072 33.0 0.3 26 778-803 40-66 (128)
237 1d5g_A Human phosphatase HPTP1 21.8 22 0.00076 31.0 0.4 32 769-803 34-67 (96)
238 2qbw_A PDZ-fibronectin fusion 21.8 61 0.0021 31.9 3.7 26 778-803 31-56 (195)
239 2vsp_A PDZ domain-containing p 21.7 15 0.0005 32.0 -0.8 25 282-306 35-60 (91)
240 3khf_A Microtubule-associated 21.7 19 0.00066 31.7 -0.0 26 281-306 41-67 (99)
241 1n7t_A 99-MER peptide of densi 21.6 36 0.0012 30.1 1.8 27 280-306 49-75 (103)
242 2i04_A Membrane-associated gua 21.5 19 0.00067 30.6 -0.0 25 282-306 33-59 (85)
243 2i1n_A Discs, large homolog 3; 21.5 21 0.0007 31.6 0.1 27 280-306 40-68 (102)
244 2opg_A Multiple PDZ domain pro 21.5 23 0.00079 31.0 0.5 26 281-306 37-64 (98)
245 2iwq_A Multiple PDZ domain pro 21.5 22 0.00075 33.1 0.3 31 770-803 61-93 (123)
246 3qik_A Phosphatidylinositol 3, 21.5 9.4 0.00032 35.1 -2.1 30 280-309 45-75 (101)
247 2eeg_A PDZ and LIM domain prot 21.4 29 0.001 30.2 1.1 24 780-803 41-65 (94)
248 1m5z_A GRIP, AMPA receptor int 21.4 32 0.0011 29.6 1.4 16 788-803 50-65 (91)
249 2z17_A Pleckstrin homology SEC 21.3 15 0.00052 32.7 -0.8 25 779-803 56-81 (104)
250 2fe5_A Presynaptic protein SAP 21.2 20 0.00068 31.1 -0.0 16 291-306 52-67 (94)
251 1uf1_A KIAA1526 protein; PDZ d 21.2 20 0.00068 33.3 -0.0 33 768-803 46-79 (128)
252 2awx_A Synapse associated prot 21.1 23 0.00077 31.7 0.3 16 788-803 52-67 (105)
253 2r4h_A Membrane-associated gua 20.9 28 0.00096 31.6 0.9 32 769-803 50-83 (112)
254 3kl9_A PEPA, glutamyl aminopep 20.8 2.4E+02 0.0082 31.0 8.7 63 641-711 4-67 (355)
255 2jre_A C60-1 PDZ domain peptid 20.8 17 0.00058 32.6 -0.6 16 788-803 63-78 (108)
256 2edp_A Fragment, shroom family 20.8 16 0.00053 32.6 -0.9 26 280-305 41-68 (100)
257 1q7x_A PDZ2B domain of PTP-BAS 20.7 27 0.00094 31.2 0.8 25 779-803 50-76 (108)
258 2hc8_A PACS, cation-transporti 20.7 42 0.0015 31.0 2.1 64 759-840 2-66 (113)
259 2qg1_A Multiple PDZ domain pro 20.7 17 0.00058 31.5 -0.6 26 281-306 36-63 (92)
260 2koj_A Partitioning defective 20.6 26 0.00088 31.5 0.6 40 281-328 46-87 (111)
261 1v1h_A Fibritin, fiber protein 20.6 30 0.001 31.9 1.0 11 724-734 59-69 (103)
262 1wha_A KIAA0147 protein, scrib 20.5 30 0.001 30.8 1.0 25 779-803 46-72 (105)
263 2la8_A Inactivation-NO-after-p 20.5 21 0.00072 32.3 -0.0 27 280-306 31-59 (106)
264 1uhp_A Hypothetical protein KI 20.5 24 0.00081 31.7 0.3 32 769-803 42-75 (107)
265 1y8t_A Hypothetical protein RV 20.4 60 0.002 35.0 3.6 28 279-306 247-275 (324)
266 1n7e_A AMPA receptor interacti 20.4 20 0.00069 31.4 -0.2 24 780-803 39-64 (97)
267 2f5y_A Regulator of G-protein 20.2 36 0.0012 29.5 1.4 16 788-803 42-57 (91)
268 2jik_A Synaptojanin-2 binding 20.2 26 0.00087 30.9 0.5 24 780-803 46-71 (101)
269 2ejy_A 55 kDa erythrocyte memb 20.0 23 0.00077 31.8 0.1 26 778-803 43-70 (97)
No 1
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=100.00 E-value=1.5e-142 Score=1224.47 Aligned_cols=491 Identities=46% Similarity=0.780 Sum_probs=461.0
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEE
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLV 535 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllv 535 (963)
|+|+++ +..+.+.+.|+|||+|+++..+++..+.+| +.+.|+++++..+|+||.||++.++.+++...+|+++|
T Consensus 1 M~~~~~----~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~rv~lv 76 (497)
T 3h8g_F 1 MELVVK----SVAAASVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLV 76 (497)
T ss_dssp CEEEEE----CSCGGGCCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEE
T ss_pred CEEEEE----cCChhhccCCEEEEEEecCCccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEE
Confidence 899998 677888999999999999877777777777 78999999999999999999999998887788999999
Q ss_pred EcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccch-HHHHHHHHHHHhcCcccCCCccCCCCCCccCc
Q psy3774 536 NLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNL-SCLIIRTIIIISDNLYRSDAQKSKKKPIKINI 614 (963)
Q Consensus 536 GLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l 614 (963)
|||+ .++++.+.+|++++.++|.+++.+++++.+.++.......+. .+.++++++|+.++.|+|++||++++++ +++
T Consensus 77 GlG~-~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~~~-~~l 154 (497)
T 3h8g_F 77 GSGK-DEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVEP-RAL 154 (497)
T ss_dssp EEES-SSCBCHHHHHHHHHHHHHHHHHSCCSEEEECCTTCCBTTSCTTTHHHHHHHHHHHHTTCCCCTTCSSCCCC-CSC
T ss_pred ECCC-cccCCHHHHHHHHHHHHHHHhhCCCceEEEecccccccccchhhHHHHHHHHHHHhcCccccccccCccCC-Ccc
Confidence 9999 888999999999999999999999999999888765444443 5678999999999999999999987543 357
Q ss_pred eEEEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhC-CCeEEEeCHHHHHhcCCCeE
Q psy3774 615 KKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSL 693 (963)
Q Consensus 615 ~~l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~-g~~v~V~d~~~l~~~gmg~~ 693 (963)
+++.++....+.++.++++++++++++++++||||+|+|||+|||++||++++++++++ |++|+|+|+++|+++|||+|
T Consensus 155 ~~l~l~~~~~~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~ 234 (497)
T 3h8g_F 155 KKVTLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAF 234 (497)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHH
T ss_pred cEEEEEcCCcchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcE
Confidence 78888764333456788999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred eeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEE
Q psy3774 694 LSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNII 773 (963)
Q Consensus 694 laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~ 773 (963)
|+|||||.+|||||+|+|+|+++.++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++||||+
T Consensus 235 laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~ 314 (497)
T 3h8g_F 235 YAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLV 314 (497)
T ss_dssp HHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHTCSSEEE
T ss_pred EEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcCCCeEEE
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEee
Q psy3774 774 GVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFS 853 (963)
Q Consensus 774 ~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~s 853 (963)
++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+||
T Consensus 315 ~~i~~~ENm~~g~A~rPgDVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~~~~g~~s 394 (497)
T 3h8g_F 315 CLLACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYAERFKPQAVIDIATLTGACIVALGSHTTGLMG 394 (497)
T ss_dssp EEEEEEEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTTTSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCCchhhhhhHHHHHHHHhcCCCEEEEecccHHHHHHHhCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeeccCCc
Q psy3774 854 RNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAW 933 (963)
Q Consensus 854 n~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~ 933 (963)
||| +|+++|++||+.+||++||||||++|+++|||++|||+|+|+|+||+||||+||++||+++||+|||||||+|
T Consensus 395 n~d----~l~~~l~~ag~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~ 470 (497)
T 3h8g_F 395 NND----DLVGQLLDAGKRADDRAWQLPLFDEYQEQLDSPFADMGNIGGPKAGTITAGCFLSRFAKAYNWAHMDIAGTAW 470 (497)
T ss_dssp SCH----HHHHHHHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSSSHHHHHHHHHHTTCTTSCEEEEECTTTSE
T ss_pred CCH----HHHHHHHHHHHHhCCCeEeCCCCHHHHHhcCCCeeceeCCCCCchhhHHHHHHHHHhCCCCCEEEEeCCCCCc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCcchHHHHHHHHHhhCC
Q psy3774 934 KS-GDKKGATGRPVTLLTYYLMLKSP 958 (963)
Q Consensus 934 ~~-~~~kGaTG~gvr~L~~~l~~~~~ 958 (963)
.+ +.++|+||+|||||++||+++++
T Consensus 471 ~~~~~~~g~TG~~vr~L~~~l~~~~~ 496 (497)
T 3h8g_F 471 ISGGKDKGATGRPVPLLTQYLLDRAG 496 (497)
T ss_dssp ECSSTTCEECCTTHHHHHHHHHHHHT
T ss_pred cCCCCCCCcccHHHHHHHHHHHHhhc
Confidence 76 45799999999999999998753
No 2
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=100.00 E-value=1.9e-142 Score=1219.93 Aligned_cols=486 Identities=43% Similarity=0.724 Sum_probs=458.8
Q ss_pred cceeEeeecccccccccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEE
Q psy3774 456 IIMDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRIL 533 (963)
Q Consensus 456 ~~M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vl 533 (963)
+.|+|+++ +....+.+.|+|||||+++..+++..+.+| +++.|+++++..+|+||.||++.++.+++...+|++
T Consensus 1 m~M~~~~~----~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~~v~ 76 (490)
T 3jru_B 1 MALQFTLN----QDAPASAAVDCIVVGAFADKTLSPAAQALDSASQGRLTALLARGDVAGKTGSTTLLHDLPGVAAPRVL 76 (490)
T ss_dssp CCCEEEEE----CCCTTTCCSSEEEEEECTTSCBCHHHHHHHHHTTSHHHHHHHHTCSCCSTTCEEEEECCTTCSSSEEE
T ss_pred CceEEEEE----cCCcccccCCEEEEEEeCCCccchhHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEccCCCCCccEEE
Confidence 35899998 677888899999999999887777777777 788999999999999999999999988777889999
Q ss_pred EEEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccC
Q psy3774 534 LVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKIN 613 (963)
Q Consensus 534 lvGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~ 613 (963)
+||||+ .++++.+.+|++++.++|.+++.+++++.+.++.......+..+.+++++||+.++.|+|++||+++++..+.
T Consensus 77 lvGlG~-~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aeg~~l~~Y~f~~yks~~~~~~~~ 155 (490)
T 3jru_B 77 VVGLGD-AGKFGVAPYLKAIGDATRALKTGAVGTALLTLTELTVKARDAAWNIRQAVTVSDHAAYRYTATLGKKKVDETG 155 (490)
T ss_dssp EEECCC-GGGCSHHHHHHHHHHHHHHHSSSSCSEEEECGGGSCCTTCCHHHHHHHHHHHHHHHHCCCCTTCSSCCCCCCS
T ss_pred EEecCC-cccCCHHHHHHHHHHHHHHHhhCCCceEEEECcccccccccHHHHHHHHHHHHHhcccchhhhccCCccccCC
Confidence 999999 8889999999999999999999999999998887665556666789999999999999999999987644456
Q ss_pred ceEEEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhC-CCeEEEeCHHHHHhcCCCe
Q psy3774 614 IKKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGS 692 (963)
Q Consensus 614 l~~l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~-g~~v~V~d~~~l~~~gmg~ 692 (963)
++++.++... .+.+++++++++++++||||+|+|||+|||++||++++++++++ |++|+|+|+++|+++|||+
T Consensus 156 l~~l~l~~~~------~~~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~ 229 (490)
T 3jru_B 156 LTTLAIAGDD------ARALAVGVATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGS 229 (490)
T ss_dssp CCEEEEEBCC------HHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHH
T ss_pred ccEEEEecCC------HHHHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCc
Confidence 7888876531 26789999999999999999999999999999999999999998 9999999999999999999
Q ss_pred EeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEE
Q psy3774 693 LLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNI 772 (963)
Q Consensus 693 ~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV 772 (963)
||+|||||.+|||||+|+|+|++ .++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++||||
T Consensus 230 ~laVg~gS~~pPrli~l~y~g~~-~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv 308 (490)
T 3jru_B 230 LLSVARGSANRPRLIVLKWNGGG-DARPYVLVGKGITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAELPINL 308 (490)
T ss_dssp HHHHHHTCSSCCEEEEEEEETTT-TSCCEEEEECEEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTTCSSEE
T ss_pred EEEEccCCCCCCEEEEEEEcCCC-CCCcEEEEcCeeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999999987 67899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEe
Q psy3774 773 IGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLF 852 (963)
Q Consensus 773 ~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~ 852 (963)
+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|
T Consensus 309 ~~~i~~~ENm~sg~A~rPgDVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~~~~g~~ 388 (490)
T 3jru_B 309 VVVVPAVENAIDGNAYRPSDVITSMSGKTIEVGNTDAEGRLILCDALTYAERFNPEALVDVATLTGACMVALGHQTAGLM 388 (490)
T ss_dssp EEEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTTTCEEEE
T ss_pred EEEEEeeccCCCCCCCCCCCEEEecCCcEEEecCCCchHhHHHHHHHHHHhhcCCCEEEEEcchHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeeccCC
Q psy3774 853 SRNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVA 932 (963)
Q Consensus 853 sn~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a 932 (963)
|||| +|+++|++||+.+||++||||||++|+++|||++|||+|+|+|+||+||||+||++||+++||+|||||||+
T Consensus 389 sn~d----~l~~~l~~ag~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a 464 (490)
T 3jru_B 389 SKHD----DLANELLAAGEHVFDRAWRLPLWDEYQGLLDSTFADVYNIGGRWGGAITAGCFLSRFTENQRWAHLDIAGVA 464 (490)
T ss_dssp ESCH----HHHHHHHHHHHHTTCCEEECCCCGGGGGGGCCSSSSEESCCCSSCHHHHHHHHHHTTCTTSCEEEEECTTTS
T ss_pred eCCH----HHHHHHHHHHHHhCCceEeCCCCHHHHhhcCCCeeeeeCCCCCchHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcchHHHHHHHHHhhC
Q psy3774 933 WKSGDKKGATGRPVTLLTYYLMLKS 957 (963)
Q Consensus 933 ~~~~~~kGaTG~gvr~L~~~l~~~~ 957 (963)
|.++.++|+||||||||++||++++
T Consensus 465 ~~~~~~kG~TG~~vr~L~~~l~~~a 489 (490)
T 3jru_B 465 SDEGKRGMATGRPVGLLTQWLLDRA 489 (490)
T ss_dssp BCSSTTCCBCCTTHHHHHHHHHHHH
T ss_pred cCCCCCCCCcchHHHHHHHHHHHhc
Confidence 9877799999999999999999864
No 3
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=100.00 E-value=3.8e-142 Score=1230.84 Aligned_cols=493 Identities=44% Similarity=0.796 Sum_probs=453.4
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEE
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLV 535 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllv 535 (963)
|+|+++ ...+.+.+.|++||+++++..+++....+| +.+.++++++..+|+||.|+++.++.+++.+.+|+++|
T Consensus 1 m~~~~~----~~~~~~~~~~~lvv~v~~~~~l~~~~~~~~~~~~~~l~~~~~~~~f~gk~g~~~~~~~~~~~~~~~v~lv 76 (503)
T 1gyt_A 1 MEFSVK----SGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLI 76 (503)
T ss_dssp CEEEEE----CCCGGGCCSSCEEEEEETTTEECHHHHHHHTTSSSHHHHHHHHTSCCCCTTCEEEEESCTTCSSSEEEEE
T ss_pred CEEEEe----cCcccccCCCEEEEEEecCCccchHHHHHhHHhHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEE
Confidence 678887 445556788999999999877666555566 78899999999999999999999998777778999999
Q ss_pred EcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCce
Q psy3774 536 NLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIK 615 (963)
Q Consensus 536 GLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~ 615 (963)
|||+ .++++.+.+|++++.++|.+++.+++++.+.++.+.....+..+..+++++|+.++.|+|++||+++++.+..++
T Consensus 77 GlG~-~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~g~~l~~Y~f~~~k~~~~~~~~~~~ 155 (503)
T 1gyt_A 77 GCGK-ERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLR 155 (503)
T ss_dssp ECCS-TTCCCHHHHHHHHHHHHHHHHHSCCSEEEECGGGSCBTTBCHHHHHHHHHHHHHHHHCCCCTTCSSCCCCCCCCC
T ss_pred EcCc-hhhcCHHHHHHHHHHHHHHHHhcCCceEEEEcccccccccccHHHHHHHHHHHHHhCcccccccccccccccccc
Confidence 9999 778999999999999999999999999998887653332222456789999999999999999998643333467
Q ss_pred EEEEEecC-cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCC--CeEEEeCHHHHHhcCCCe
Q psy3774 616 KIIFALDE-KNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK--MDIEIINREQMQRLKMGS 692 (963)
Q Consensus 616 ~l~l~~~~-~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g--~~v~V~d~~~l~~~gmg~ 692 (963)
++.++... .+.+..++++++++++++|+++||||+|+|||+|||++||++++++++++| ++|+|+|+++|+++|||+
T Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~ 235 (503)
T 1gyt_A 156 KMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHS 235 (503)
T ss_dssp EEEEECSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHH
T ss_pred EEEEEecCccchHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCc
Confidence 88887642 123456789999999999999999999999999999999999999999999 999999999999999999
Q ss_pred EeeecCCCCCCCeEEEEEEcCCCC-CCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcE
Q psy3774 693 LLSVTHGSSEPPKLIIIKYMNGKF-KEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELN 771 (963)
Q Consensus 693 ~laVg~GS~~~Prli~l~Y~g~~~-~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vn 771 (963)
||+|||||.+|||||+|+|+|+++ .++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++|||
T Consensus 236 ~laVg~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~l~vn 315 (503)
T 1gyt_A 236 YLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPIN 315 (503)
T ss_dssp HHHHHHTSSSCCEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSE
T ss_pred eeeecccCCCCCeEEEEEECCCCCCCCCcEEEEcCceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcCCCee
Confidence 999999999999999999999765 5789999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEE
Q psy3774 772 IIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGL 851 (963)
Q Consensus 772 V~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~ 851 (963)
|+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+
T Consensus 316 V~~~i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~P~~iID~ATLTGA~~vALG~~~ag~ 395 (503)
T 1gyt_A 316 VIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGL 395 (503)
T ss_dssp EEEEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHGGGGCCSEEEEEECCCHHHHHHHTTTSEEE
T ss_pred EEEEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCCcchhhHhHHHHHHHHHcCCCEEEEhhhhHHHHHHHhCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeeccC
Q psy3774 852 FSRNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGV 931 (963)
Q Consensus 852 ~sn~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~ 931 (963)
||||| +|+++|++||+.+||++||||||++|+++|||++|||+|+|+|+||+||||+||++||+++||+|||||||
T Consensus 396 ~sn~d----~l~~~l~~Ag~~~ge~~WrmPl~~~y~~~l~S~~ADl~N~g~~~~GsitAA~FL~~Fv~~~~WaHlDIAG~ 471 (503)
T 1gyt_A 396 MANHN----PLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGT 471 (503)
T ss_dssp EESCH----HHHHHHHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTT
T ss_pred EeCCH----HHHHHHHHHHHHhCCceeeCCCCHHHHHHcCCchhhhcCCCCCCCchhHHHHHHHHhCCCCCEEEEecCcc
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCcchHHHHHHHHHhhCCC
Q psy3774 932 AWKSGDKKGATGRPVTLLTYYLMLKSPN 959 (963)
Q Consensus 932 a~~~~~~kGaTG~gvr~L~~~l~~~~~~ 959 (963)
+|.++.++|+||+|||||++|++++++.
T Consensus 472 a~~~~~~kg~TG~~vrtL~~~l~~~~~~ 499 (503)
T 1gyt_A 472 AWRSGKAKGATGRPVALLAQFLLNRAGF 499 (503)
T ss_dssp SEECGGGCEECCTTHHHHHHHHHHHTTC
T ss_pred CcCCCCCCCcEeHHHHHHHHHHHHHhhh
Confidence 9977778999999999999999988653
No 4
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=100.00 E-value=7.1e-141 Score=1206.03 Aligned_cols=482 Identities=37% Similarity=0.599 Sum_probs=420.0
Q ss_pred ceeEeeecccccccccccCCCEEEEEEecCCCccccccccCchHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEEE
Q psy3774 457 IMDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDIDKYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVN 536 (963)
Q Consensus 457 ~M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllvG 536 (963)
.|+|+++ +.. +.+.|++||+|+++..+++... .+.++++++..+|+||.||++.++.++ +|+++||
T Consensus 1 mM~~~~~----~~~--~~~~d~lvv~v~~~~~l~~~~~----~~~l~~~~~~~~f~gk~G~~~~l~~~~----~~v~lvG 66 (486)
T 3pei_A 1 MMKIVVN----NQS--TLAAELMIVAQENLQKLVEQTK----CPNSKALLDRRIFKAKSGEVLPLLHGD----KIVILLG 66 (486)
T ss_dssp CCEEEEE----SSC--CSSEEEEEECGGGHHHHHHHC------------CTTTSCCCCTTCEEEECCSS----SEEEEEE
T ss_pred CeEEEEe----cCC--CCcCCEEEEEEeCCCccCcccc----hHHHHHHHHhCCCCCCCCCEEEEeCCC----CeEEEEE
Confidence 3899998 333 6789999999998754433222 577889999999999999999998654 7999999
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCceE
Q psy3774 537 LGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKK 616 (963)
Q Consensus 537 LG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~~ 616 (963)
||+ .++++.+.+|++++.++|.+++.+.+++.+.++.+.. ..+..+.+++++||+.++.|+|++||++++ ++++++
T Consensus 67 lG~-~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~--~~~~~~ 142 (486)
T 3pei_A 67 LGL-RQDFIASEYDKIIAKAAEQLKKLAIKEISVDIDYAFE-NDNVKQFTLDTVRALISETYVFDQLKTEKE--NYSLEQ 142 (486)
T ss_dssp CCC-GGGCCGGGHHHHHHHHHHHHHHTTCCEEEEECTTSCS-SSCHHHHHHHHHHHHHHHTCCCCTTCSSCC--CCCCCE
T ss_pred cCC-cccCCHHHHHHHHHHHHHHHhhcCceEEEEEeccccc-ccchHHHHHHHHHHHHHcCcccccccCCCC--CCcccE
Confidence 999 8889999999999999999999999999998876543 334567789999999999999999999863 235778
Q ss_pred EEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhC-CCeEEEeCHHHHHhcCCCeEee
Q psy3774 617 IIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSLLS 695 (963)
Q Consensus 617 l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~-g~~v~V~d~~~l~~~gmg~~la 695 (963)
++++.... .+.++++++++++++|+++||||+|+|||+|||++||++++++++++ |++|+|+|+++|+++|||+||+
T Consensus 143 ~~l~~~~~--~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~la 220 (486)
T 3pei_A 143 IELVYSGD--QDIEDSAKIGSAIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALA 220 (486)
T ss_dssp EEEECCSS--SCCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHH
T ss_pred EEEecCCh--HHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEE
Confidence 88874321 45678899999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred ecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEE
Q psy3774 696 VTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGV 775 (963)
Q Consensus 696 Vg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~v 775 (963)
|||||.+|||||+|+|+|++++++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++||||+++
T Consensus 221 Vg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~ 300 (486)
T 3pei_A 221 VGRGSYMSNYTVCMEYKGGNEGDAPIVLVGKGLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLNLPVNVVGV 300 (486)
T ss_dssp HHTTCSSCCEEEEEEEECSCTTSCCEEEEEEEEETEECC------------EECSHHHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred eccCCCCCCEEEEEEECCCCCCCCcEEEEccceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99999999999999999987778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCC
Q psy3774 776 IVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRN 855 (963)
Q Consensus 776 i~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~ 855 (963)
||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+||||
T Consensus 301 i~~~ENm~sg~A~rPgDVits~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGA~~vALG~~~~g~~sn~ 380 (486)
T 3pei_A 301 MGLAENAVDARSYRPGDVLKSMKGITVEVSNTDAEGRLVLCDTLTYIGKYKPKAVIDLATLTGAMIISLGDAYSGMFANS 380 (486)
T ss_dssp EEEEEC------CCTTEEEECTTCCEEEECCGGGHHHHHHHHHHHHGGGGCCSEEEEEECCCTHHHHHHTTSCEEEEESC
T ss_pred EEeeccCCCCCCCCCCCEEEeCCCcEEEEeccCcccceeehhHHHHHHhhCCCEEEEehhhHHHHHHHhCCCceEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCC-CCCcchhHHHHHHHhccCCCCeEEEeeccCCcc
Q psy3774 856 DEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIG-NSSADSITAACFLENFTKKYVWAHLDIAGVAWK 934 (963)
Q Consensus 856 ~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g-~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~~ 934 (963)
| +|+++|++||+.+||++||||||++|+++|||++|||+|+| +|+||+||||+||++||+++||+|||||||+|.
T Consensus 381 d----~l~~~l~~ag~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~~ 456 (486)
T 3pei_A 381 D----KLANSLEQAANASNDLIWRLPLHKPYLKKIESKVADMDNCGRDRSAGSIVAALFLSKFTEDYEWAHLDIAGSAMG 456 (486)
T ss_dssp H----HHHHHHHHHHHHHCCCEEECCCCGGGGGGGCCSSSSEESSCSSSTTHHHHHHHHHHTTCTTSCEEEEECHHHHHC
T ss_pred H----HHHHHHHHHHHHHCCCeEeCCCCHHHHHHCCCCeeeeeCCCCCCCcchHHHHHHHHHhCCCCCEEEEecCCCCcC
Confidence 9 99999999999999999999999999999999999999999 899999999999999999999999999999998
Q ss_pred CCCCCCCCcchHHHHHHHHHhhCC-CCCC
Q psy3774 935 SGDKKGATGRPVTLLTYYLMLKSP-NINF 962 (963)
Q Consensus 935 ~~~~kGaTG~gvr~L~~~l~~~~~-~~~~ 962 (963)
++.++|+||+|||||++||+++++ |.-|
T Consensus 457 ~~~~~g~TG~~vr~L~~~l~~~~~~~~~~ 485 (486)
T 3pei_A 457 DFASCKASGRPVPLLVHYLISQAKENLYF 485 (486)
T ss_dssp C-CCCCCCCTTHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCcccHHHHHHHHHHHHHhhhcccc
Confidence 878999999999999999999863 5555
No 5
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.6e-139 Score=1192.19 Aligned_cols=484 Identities=29% Similarity=0.450 Sum_probs=445.3
Q ss_pred cceeEeeecccccccccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEE
Q psy3774 456 IIMDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRIL 533 (963)
Q Consensus 456 ~~M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vl 533 (963)
..|+|++. +. .....|++||+++++..+.+....+| +++.|++++++++|+||.|++..++.+.+...+||+
T Consensus 23 ~~m~~~~~----~~--~~~~~d~lvig~~~~~~~~~~~~~~Deal~g~L~~l~~~~~F~gk~G~~~~~~~~~~~~~~rvl 96 (515)
T 3kzw_A 23 NAMNFKLN----NT--LSNEINTLIIGIPEHLNQLERISFNHIDITESLERLKHQHIIGSKVGKIYTTAFDVQDQTYRLI 96 (515)
T ss_dssp CSEEEEES----CC--CCTTCCEEEEEEESCGGGSCCCEETTEECHHHHHHHHHTTSSCCSBTCEEEEEEEETTEEEEEE
T ss_pred hceeEEec----cC--CCCCCCEEEEEEeCCcccccchHHHHHHHHHHHHHHHhcCccCCCCCCeEEEEecCCCCcCEEE
Confidence 35889887 32 23678999999999876666667788 899999999999999999998876644445789999
Q ss_pred EEEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccC
Q psy3774 534 LVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKIN 613 (963)
Q Consensus 534 lvGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~ 613 (963)
+||||+ .++++.+++|++++++++.+++.+++++.+.++.+.....+.++.++++++++.++.|+|++||++++++ .
T Consensus 97 lvGlGk-~~~~~~~~~r~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~Y~f~~yks~~~~~--~ 173 (515)
T 3kzw_A 97 TVGLGN-LKTRSYQDMLKIWGHLFQYIKSEHIEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAP--F 173 (515)
T ss_dssp EEEEEC-STTCCHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCCSSSCHHHHHHHHHHHHHHTTCCCCTTCTTCCCC--C
T ss_pred EEEcCC-cccCCHHHHHHHHHHHHHHHhhcCCceEEEEcccccccccCHHHHHHHHHHHHHhCceecccccCCCCCC--c
Confidence 999999 8999999999999999999999999999999987766556677889999999999999999999986543 2
Q ss_pred ceEEEEEecCcchhhHH-HHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCe
Q psy3774 614 IKKIIFALDEKNYIDGK-NAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGS 692 (963)
Q Consensus 614 l~~l~l~~~~~~~~~~~-~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~ 692 (963)
..++.+... +..+ +++++++++++++++||||+|+|||+|||++||++++++++++|++|+|+|+++|+++|||+
T Consensus 174 ~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~ 249 (515)
T 3kzw_A 174 KTNLNLISE----SLIELDFIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGL 249 (515)
T ss_dssp CEEEEEECS----SCCCCHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHH
T ss_pred ceEEEEcCc----chhHHHHHHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCc
Confidence 223444221 2333 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEE
Q psy3774 693 LLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNI 772 (963)
Q Consensus 693 ~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV 772 (963)
||+|||||.+|||||+|+|+|+++.++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++|+||
T Consensus 250 ~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~lpvnv 329 (515)
T 3kzw_A 250 LQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQLPVNI 329 (515)
T ss_dssp HHHHHTTSSSCCEEEEEEEESSCSSCCCEEEEEEEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEccCCCCCCEEEEEEECCCCCCCCcEEEecCceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcCCCceE
Confidence 99999999999999999999987778999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEe
Q psy3774 773 IGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLF 852 (963)
Q Consensus 773 ~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~ 852 (963)
+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|
T Consensus 330 ~~~i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLvLADaL~yA~~~~p~~iiD~ATLTGA~~vALG~~~ag~~ 409 (515)
T 3kzw_A 330 VGVLACAENMINEASMKPDDVFTALSGETVEVMNTDAEGRLVLADAVFYANQYQPSVIMDFATLTGAAIVALGDDKAAAF 409 (515)
T ss_dssp EEEEEEEEECCCTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHTTCCSEEEEEECCCHHHHHHHCTTCEEEE
T ss_pred EEEEEeeccCCCCCCCCCCCEEEeCCCCEEEecCCCcchheehHHHHHHHhhcCCCEEEEeecchHHHHHHcCCceeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC-CccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhc-CCCcccccCCCCCCcchhHHHHHHHhccCCCCeEEEeecc
Q psy3774 853 SR-NDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQL-KSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAG 930 (963)
Q Consensus 853 sn-~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~l-kS~vADl~N~g~~~~GaitAA~FL~~Fv~~~pWaHLDIAG 930 (963)
+| || +|++++.+||+.+||++||||||++|++++ +|++|||+|+|+|+||+||||+||++||+++||+||||||
T Consensus 410 ~~n~d----~l~~~l~~a~~~~ge~~WrlPl~~~y~~~l~~S~vADl~N~g~~~ggaitAA~FL~~Fv~~~~W~HlDIAG 485 (515)
T 3kzw_A 410 ESNSK----VILNDILQISSEVDEMVFELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSGQTPHIHFDIAG 485 (515)
T ss_dssp EESCH----HHHHHHHHHHHHTTCCEEECCCCHHHHHHTTCCSSSSEESCCSSSCHHHHHHHHHHGGGTTSCEEEEECTT
T ss_pred eCChH----HHHHHHHHHHHHhCCceecCCCCHHHHHhhcCCCcccccCCCCCchhhHHHHHHHHHhCCCCCEEEEECCc
Confidence 96 57 899999999999999999999999999998 7999999999999999999999999999999999999999
Q ss_pred CCccCCC----CCCCCcchHHHHHHHHHhh
Q psy3774 931 VAWKSGD----KKGATGRPVTLLTYYLMLK 956 (963)
Q Consensus 931 ~a~~~~~----~kGaTG~gvr~L~~~l~~~ 956 (963)
|||.++. |+|+||||||||++||+++
T Consensus 486 ~a~~~~~~~~~~kGaTG~~vrtL~~~l~~~ 515 (515)
T 3kzw_A 486 PATTNKASYNGPKGPTGFMIPTIVQWLKQQ 515 (515)
T ss_dssp TTEESSCBTTBSSEECCTTHHHHHHHHTTC
T ss_pred cCccCCCCCCCCCCcccccHHHHHHHHHhC
Confidence 9997652 7999999999999999864
No 6
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=100.00 E-value=7.6e-138 Score=1178.76 Aligned_cols=475 Identities=31% Similarity=0.486 Sum_probs=439.3
Q ss_pred cccccCCCEEEEEEecCCCccccccccC--chHHHHHHHHcC---CCCCCCCCEEEEcccC-CCCccEEEEEEcCCCCCc
Q psy3774 470 SIMSLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSG---DLNEKLGSTLLLRNIQ-KINAKRILLVNLGDKKKK 543 (963)
Q Consensus 470 ~~~~~~~d~lVv~v~e~~~l~~~~~~ld--~~g~l~~~i~~~---~f~gk~ge~~~l~~~~-~~~~~~vllvGLG~~~~~ 543 (963)
..-+...|++||+|+++..++.....+| +++.|+++++.+ +|+||.||++.++.++ ....+||++||||+ .++
T Consensus 36 ~~~~~~~~l~Vv~V~e~~~l~G~ak~lD~as~G~Is~llk~G~~~~f~Gk~g~~~~l~~~~~~~~~~rvllVGlGk-~~~ 114 (528)
T 3kr4_A 36 GGCNVEEGLTIFLVNNPGKENGPVKISSKVNDKQVSEFLKDENMEKFNVKLGTSKHFYMFNDNKNSVAVGYVGCGS-VAD 114 (528)
T ss_dssp GCBCCCSSEEEEEECCSSSTTCBCCCCSCBSCHHHHHHTSHHHHTTSBCCTTCEEEEEEECTTSCEEEEEEEECCS-CSS
T ss_pred ccccCCCCeEEEEecCCcccCccHHHHHHHHHHHHHHHHHcCCcCcceeCCCCEEEEecCCCCCCccEEEEEECCC-ccc
Confidence 4446678999999999988888888898 899999999996 8999999999998654 34678999999999 889
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCC-ccCceEEEEEec
Q psy3774 544 IKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPI-KINIKKIIFALD 622 (963)
Q Consensus 544 ~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~-~~~l~~l~l~~~ 622 (963)
++.+.+|+++++++|.+++.+.+++.+.++.. . .....++++||++++.|+|++||+++++. ...+++++++..
T Consensus 115 l~~~~~r~a~~~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~~eg~~l~~y~f~~yks~~~~~~~~~l~~~~~~~~ 189 (528)
T 3kr4_A 115 LSEADMKRVVLSLVTMLHDNKLSKLTVVFEIN-V----DKNLFRFFLETLFYEYMTDERFKSTDKNVNMEYIKHLGVYIN 189 (528)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCSEEEEEECSC-C----CHHHHHHHHHHHHHHHCCCCTTCSTTCCC-CCCCSEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHhhcCccEEEEeccCC-C----cHHHHHHHHHHHHhhhccccccccCCCcccccCceEEEEEeC
Confidence 99999999999999999999998887766432 1 12456889999999999999999976543 245778888764
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCC
Q psy3774 623 EKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE 702 (963)
Q Consensus 623 ~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~ 702 (963)
. .+..++++++++++++|+++||||+|+|||+|||++||++|+++++++|++|+|+|+++|+++|||+||+|||||.+
T Consensus 190 ~--~~~~~~~~~~~~~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~ 267 (528)
T 3kr4_A 190 N--ADTYKEEVEKARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMY 267 (528)
T ss_dssp T--GGGTTHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSS
T ss_pred C--hHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCC
Confidence 2 34667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCC--hhhhcccchhhhHHHHHHHHHHhcCC-CcEEEEEEEee
Q psy3774 703 PPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYS--MDEMKYDMCGAASILGTLYAISEMNL-ELNIIGVIVAS 779 (963)
Q Consensus 703 ~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~--M~~MK~DM~GAAaVlga~~aia~l~l-~vnV~~vi~~~ 779 (963)
|||||+|+|+|+++.++||+|||||||||||||||||+.+ |++||+||+|||+|+|+|+|+++|++ ||||++++|+|
T Consensus 268 pPrli~l~y~g~~~~~~~iaLVGKGITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~~~~vnv~~vi~~~ 347 (528)
T 3kr4_A 268 PNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVC 347 (528)
T ss_dssp CCEEEEEEEECSSCCCEEEEEEEEEEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHCCSSEEEEEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCcEEEecCceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcCCCCceEEEEEEee
Confidence 9999999999987777899999999999999999999865 99999999999999999999999999 69999999999
Q ss_pred ccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCCccch
Q psy3774 780 ENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKH 859 (963)
Q Consensus 780 ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~~~~ 859 (963)
||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|||||
T Consensus 348 ENm~sg~A~rPgDVit~~~GkTVEV~NTDAEGRLvLADaL~yA~~~~p~~iID~ATLTGA~~vALG~~~agv~sn~d--- 424 (528)
T 3kr4_A 348 ENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKLGVDYIVDIATLTGAMLYSLGTSYAGVFGNNE--- 424 (528)
T ss_dssp EECCSTTSCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHHTCCSEEEEEECCCTTHHHHTTTTCEEEEESCH---
T ss_pred ccCCCCCCCCCCCEEEeCCCcEEEEecCCchhhhhhHHHHHHHHhhCCCEEEEeecchHHHHHHhCCCceEEEeCCH---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccccCCC-CCCcchhHHHHHHHhccCCCCeEEEeeccCCccCCCC
Q psy3774 860 TKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIG-NSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDK 938 (963)
Q Consensus 860 ~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl~N~g-~~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~~~~~~ 938 (963)
+|+++|.+||+.+||++||||||++|+++|||++|||+|+| +|+||+||||+||++||+++||+|||||||||.. .+
T Consensus 425 -~l~~~l~~Ag~~~ge~~WrlPl~~~y~~~l~S~vADl~N~g~~~~agsitAA~FL~~Fv~~~~WaHlDIAG~a~~~-~~ 502 (528)
T 3kr4_A 425 -ELINKILQSSKTSNEPVWWLPIINEYRATLNSKYADINQISSSVKASSIVASLFLKEFVQNTAWAHIDIAGVSWNF-KA 502 (528)
T ss_dssp -HHHHHHHHHHHHHTCCEEECCCCGGGGGGGCCSSSSEESSCSSCCCHHHHHHHHHHTTCSSSEEEEEECTTTSEET-TT
T ss_pred -HHHHHHHHHHHHcCCcEEeCCCCHHHHhhcCCceeccccCCCCCCcHHHHHHHHHHHhCCCCCEEEEECCCCccCC-CC
Confidence 99999999999999999999999999999999999999998 5899999999999999999999999999999975 46
Q ss_pred CCCCcchHHHHHHHHHhhC
Q psy3774 939 KGATGRPVTLLTYYLMLKS 957 (963)
Q Consensus 939 kGaTG~gvr~L~~~l~~~~ 957 (963)
+|+||||||+|++|+++-+
T Consensus 503 ~gaTG~gVr~L~~~~~~~~ 521 (528)
T 3kr4_A 503 RKPKGFGVRLLTEFVLNDA 521 (528)
T ss_dssp TEECCTTHHHHHHHHHHC-
T ss_pred CCceehhHHHHHHHHHhhh
Confidence 7999999999999998754
No 7
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=100.00 E-value=1.3e-135 Score=1168.71 Aligned_cols=456 Identities=36% Similarity=0.528 Sum_probs=417.9
Q ss_pred CEEEEEEecCCC------ccccccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEEEcCCCCCc-----
Q psy3774 477 DCLVVGIFKKNK------LSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGDKKKK----- 543 (963)
Q Consensus 477 d~lVv~v~e~~~------l~~~~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllvGLG~~~~~----- 543 (963)
+++||+|+++.. +++..+.+| +.+.++++++..+|+||.|+++.++.+++ ..+|+++||||+ ..+
T Consensus 2 ~~lvvgv~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~f~gk~g~~~~~~~~~~-~~~~v~lvGlG~-~~~~~~~~ 79 (484)
T 1lam_A 2 KGLVLGIYSKEKEEDEPQFTSAGENFNKLVSGKLREILNISGPPLKAGKTRTFYGLHE-DFPSVVVVGLGK-KTAGIDEQ 79 (484)
T ss_dssp EEEEEEECCCCTTCSSCCBCHHHHHHHHHTTTHHHHHHHHTCSCCCTTCEEEEEEEET-TEEEEEEEECCC-TTCCEETT
T ss_pred cEEEEEEecCCccccccccCHHHHHHhHHhHHHHHHHHHhCCCCCCCCcEEEEeCCCC-CcCEEEEEEeCc-chhcccch
Confidence 689999998642 445555566 78889999999999999999999987654 678999999999 543
Q ss_pred ----CCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCceEEEE
Q psy3774 544 ----IKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIF 619 (963)
Q Consensus 544 ----~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~~l~l 619 (963)
++.+.+|++++.++|.+++.+...+.+... +..+++++|+.++.|+|++||+++++ +.++.+
T Consensus 80 ~~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~~~----------~~~~~~a~G~~l~~Y~f~~~k~~~~~----~~~~~~ 145 (484)
T 1lam_A 80 ENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPC----------GDAQAAAEGAVLGLYEYDDLKQKRKV----VVSAKL 145 (484)
T ss_dssp TTEEHHHHHHHHHHHHHHHHHHHTTCSEEEECCT----------TCHHHHHHHHHHHHCCCCTTCSSCCC----CCEEEE
T ss_pred hccccCHHHHHHHHHHHHHHHhhcCCeEEEeCCc----------hHHHHHHHHHHHhCcccCccccCCCC----CceEEE
Confidence 366899999999999999988887765211 12578999999999999999976532 345666
Q ss_pred EecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCC--CeEEEeCHHHHHhcCCCeEeeec
Q psy3774 620 ALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK--MDIEIINREQMQRLKMGSLLSVT 697 (963)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g--~~v~V~d~~~l~~~gmg~~laVg 697 (963)
+.. ..++.+++++++++++++||||+|+|||+|||++||++++++++++| ++|+|+|+++|+++|||+||+||
T Consensus 146 ~~~-----~~~~~~~~~~~~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg 220 (484)
T 1lam_A 146 HGS-----EDQEAWQRGVLFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVA 220 (484)
T ss_dssp SSS-----SCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHH
T ss_pred ecc-----hhHHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeec
Confidence 432 24677999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCCeEEEEEEcCCC-CCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEEE
Q psy3774 698 HGSSEPPKLIIIKYMNGK-FKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVI 776 (963)
Q Consensus 698 ~GS~~~Prli~l~Y~g~~-~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~vi 776 (963)
|||.+|||||+|+|+|.+ +.++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++||||+++|
T Consensus 221 ~GS~~pPrli~l~y~g~~~~~~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~l~vnv~~~i 300 (484)
T 1lam_A 221 KGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLA 300 (484)
T ss_dssp TTSSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred cCCCCCCeEEEEEECCCCCCCCCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcCCCeeEEEEE
Confidence 999999999999999976 4568999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCCc
Q psy3774 777 VASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRND 856 (963)
Q Consensus 777 ~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~ 856 (963)
|+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|||||
T Consensus 301 ~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d 380 (484)
T 1lam_A 301 PLCENMPSGKANKPGDVVRARNGKTIQVDNTDAEGRLILADALCYAHTFNPKVIINAATLTGAMDIALGSGATGVFTNSS 380 (484)
T ss_dssp EEEEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHHTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCH
T ss_pred EeeccCCCCCCCCCCCEEEeCCCcEEEeecCCccceeeehhHHHHhhhcCCCEEEEecchHHHHHHHhCCCceEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCC-cccccCCCC-CCcchhHHHHHHHhccCCCCeEEEeeccCCcc
Q psy3774 857 EKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSN-FADISNIGN-SSADSITAACFLENFTKKYVWAHLDIAGVAWK 934 (963)
Q Consensus 857 ~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~-vADl~N~g~-~~~GaitAA~FL~~Fv~~~pWaHLDIAG~a~~ 934 (963)
+|+++|++||+.+||++||||||++|+++|+|+ +|||+|+|+ |+||+||||+||++||+++||+|||||||+|.
T Consensus 381 ----~l~~~l~~Ag~~~ge~~WrlPl~~~y~~~l~s~~~ADl~N~g~~~~~GsitAA~FL~~Fv~~~~WaHlDIAG~a~~ 456 (484)
T 1lam_A 381 ----WLWNKLFEASIETGDRVWRMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTN 456 (484)
T ss_dssp ----HHHHHHHHHHHHHSCCEEECCCCHHHHHHHHCCSSSSEESSCSSSTTHHHHHHHHHHTTCCCSSEEEEECGGGSEE
T ss_pred ----HHHHHHHHHHHHHCCcEeecCCCHHHHHhcCCCCEeeeeCCCCCCCcchHHHHHHHHHhCCCCCEEEEEcCccccc
Confidence 999999999999999999999999999999997 999999986 88999999999999999999999999999997
Q ss_pred CC----CCCCCCcchHHHHHHHHHhhC
Q psy3774 935 SG----DKKGATGRPVTLLTYYLMLKS 957 (963)
Q Consensus 935 ~~----~~kGaTG~gvr~L~~~l~~~~ 957 (963)
++ .|+|+||+|||||++||++++
T Consensus 457 ~~~~~~~~kG~TG~~vrtL~~~l~~~~ 483 (484)
T 1lam_A 457 KDEVPYLRKGMAGRPTRTLIEFLFRFS 483 (484)
T ss_dssp SSSSTTSCSEECCTTHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcEeHHHHHHHHHHHHhc
Confidence 64 378999999999999998864
No 8
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=100.00 E-value=8.5e-128 Score=1102.46 Aligned_cols=441 Identities=47% Similarity=0.798 Sum_probs=405.9
Q ss_pred cCCCEEEEEEecCCCcCcccccCC--cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc----------
Q psy3774 3 LKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN---------- 70 (963)
Q Consensus 3 ~~ad~lVvgV~e~~~l~~~~~~ld--~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~---------- 70 (963)
.++|+|||||+++..+++.++.+| +.+.|.++++..+|+||.|+++.++.+++...+||++||||+.+
T Consensus 13 ~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlG~~~~~~~~~~r~a 92 (497)
T 3h8g_F 13 VKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLVGSGKDEALGDRTWRKL 92 (497)
T ss_dssp CCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEEEEESSSCBCHHHHHHH
T ss_pred ccCCEEEEEEecCCccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEEECCCcccCCHHHHHHH
Confidence 468999999999877888888888 88999999999999999999999998887788999999999864
Q ss_pred ---------------cccccCcccccccch-hHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecCCChhhHHH
Q psy3774 71 ---------------LLLMLPFNKIEKYNL-SCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKN 134 (963)
Q Consensus 71 ---------------~~~~l~~~~~~~~d~-~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~~ 134 (963)
+.+.++.+.+...+. .|.++++++|+.++.|+|++||+++++ ++.+++++++.+..+.+..++
T Consensus 93 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~~-~~~l~~l~l~~~~~~~~~~~~ 171 (497)
T 3h8g_F 93 VASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVE-PRALKKVTLLADKAGQAEVER 171 (497)
T ss_dssp HHHHHHHHHHSCCSEEEECCTTCCBTTSCTTTHHHHHHHHHHHHTTCCCCTTCSSCCC-CCSCCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHhhCCCceEEEecccccccccchhhHHHHHHHHHHHhcCccccccccCccC-CCcccEEEEEcCCcchHHHHH
Confidence 011222222222333 577899999999999999999997653 345788888764334456678
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcC-CCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEE
Q psy3774 135 AIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIK 213 (963)
Q Consensus 135 ~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~-gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~ 213 (963)
.+++++++++++++||||+|+|||+|||++||++++++++++ |++|+|++++||+++|||+||+|||||++|||||+|+
T Consensus 172 ~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~ 251 (497)
T 3h8g_F 172 AVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLN 251 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEE
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCC
Q psy3774 214 YMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKP 293 (963)
Q Consensus 214 y~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~p 293 (963)
|+|.++.++||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||+++||+|||||||+||||
T Consensus 252 y~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~~~i~~~ENm~~g~A~rP 331 (497)
T 3h8g_F 252 YQGGKKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLVCLLACAENMPSGGATRP 331 (497)
T ss_dssp EECSCTTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTSCCT
T ss_pred ECCCCCCCCcEEEEcCceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcCCCeEEEEEEEeeccCCCCCCCCC
Confidence 99977777999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHHH
Q psy3774 294 GDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAG 373 (963)
Q Consensus 294 gDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a~ 373 (963)
|||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+++|++||
T Consensus 332 gDVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~~~~g~~sn~d----~l~~~l~~ag 407 (497)
T 3h8g_F 332 GDIVTTMSGQTVEILNTDAEGRLVLCDTLTYAERFKPQAVIDIATLTGACIVALGSHTTGLMGNND----DLVGQLLDAG 407 (497)
T ss_dssp TEEEECTTSCEEEESCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCH----HHHHHHHHHH
T ss_pred CCEEEeCCCcEEEecCCCchhhhhhHHHHHHHHhcCCCEEEEecccHHHHHHHhCCCceEEEECCH----HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred hHcCCceeecCCchhhHhhcCCCccccccCCCCCccchHHHHHHHhccCCCCeEEEeeccCcccC-CCCCCchhhh
Q psy3774 374 KMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKS-GDKKGATVEL 448 (963)
Q Consensus 374 ~~~ge~~W~lPl~~~y~~~l~s~~ADl~N~~~~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~-~~~~g~~~~l 448 (963)
+.+||++||||||++|+++++|++|||+|+++|.||+||||+||++||+++||+|||||||+|.+ +.++|+|+..
T Consensus 408 ~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~~~~~~~~g~TG~~ 483 (497)
T 3h8g_F 408 KRADDRAWQLPLFDEYQEQLDSPFADMGNIGGPKAGTITAGCFLSRFAKAYNWAHMDIAGTAWISGGKDKGATGRP 483 (497)
T ss_dssp HHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSSSHHHHHHHHHHTTCTTSCEEEEECTTTSEECSSTTCEECCTT
T ss_pred HHhCCCeEeCCCCHHHHHhcCCCeeceeCCCCCchhhHHHHHHHHHhCCCCCEEEEeCCCCCccCCCCCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999976 5567776543
No 9
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=100.00 E-value=2e-127 Score=1096.25 Aligned_cols=435 Identities=45% Similarity=0.751 Sum_probs=403.0
Q ss_pred cCCCEEEEEEecCCCcCcccccCC--cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc----------
Q psy3774 3 LKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN---------- 70 (963)
Q Consensus 3 ~~ad~lVvgV~e~~~l~~~~~~ld--~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~---------- 70 (963)
.++|+|||||+++..+++.++.+| +.+.|.++++..+|+||.|+++.++.+++..++||++||||+.+
T Consensus 15 ~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~~v~lvGlG~~~~~~~~~~r~a 94 (490)
T 3jru_B 15 AAVDCIVVGAFADKTLSPAAQALDSASQGRLTALLARGDVAGKTGSTTLLHDLPGVAAPRVLVVGLGDAGKFGVAPYLKA 94 (490)
T ss_dssp CCSSEEEEEECTTSCBCHHHHHHHHHTTSHHHHHHHHTCSCCSTTCEEEEECCTTCSSSEEEEEECCCGGGCSHHHHHHH
T ss_pred ccCCEEEEEEeCCCccchhHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEccCCCCCccEEEEEecCCcccCCHHHHHHH
Confidence 468999999999888888888888 88999999999999999999999998877788999999999865
Q ss_pred ---------------cccccCcccccccchhHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecCCChhhHHHH
Q psy3774 71 ---------------LLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNA 135 (963)
Q Consensus 71 ---------------~~~~l~~~~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~~~ 135 (963)
+.+.++.+.++..+..+.++++++|+.++.|+|++||++++++++.++++.++.. + .+.
T Consensus 95 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aeg~~l~~Y~f~~yks~~~~~~~~l~~l~l~~~--~----~~~ 168 (490)
T 3jru_B 95 IGDATRALKTGAVGTALLTLTELTVKARDAAWNIRQAVTVSDHAAYRYTATLGKKKVDETGLTTLAIAGD--D----ARA 168 (490)
T ss_dssp HHHHHHHHSSSSCSEEEECGGGSCCTTCCHHHHHHHHHHHHHHHHCCCCTTCSSCCCCCCSCCEEEEEBC--C----HHH
T ss_pred HHHHHHHHhhCCCceEEEECcccccccccHHHHHHHHHHHHHhcccchhhhccCCccccCCccEEEEecC--C----HHH
Confidence 0112222223333456778999999999999999999987644456788888653 2 267
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcC-CCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 136 IIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 136 ~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~-gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
+++++++++++++||||+|+|||+|||++||++++++++++ |++|+|++++||+++|||+||+|||||++|||||+|+|
T Consensus 169 ~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y 248 (490)
T 3jru_B 169 LAVGVATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKW 248 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEE
Confidence 99999999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred ccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCC
Q psy3774 215 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPG 294 (963)
Q Consensus 215 ~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pg 294 (963)
+|.+ .++||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||+++||+|||||||+|||||
T Consensus 249 ~g~~-~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~~~i~~~ENm~sg~A~rPg 327 (490)
T 3jru_B 249 NGGG-DARPYVLVGKGITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAELPINLVVVVPAVENAIDGNAYRPS 327 (490)
T ss_dssp ETTT-TSCCEEEEECEEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTCCCTT
T ss_pred cCCC-CCCcEEEEcCeeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcCCCcEEEEEEEeeccCCCCCCCCCC
Confidence 9987 678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHHHh
Q psy3774 295 DIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGK 374 (963)
Q Consensus 295 DVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a~~ 374 (963)
||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+++|++||+
T Consensus 328 DVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~~~~g~~sn~d----~l~~~l~~ag~ 403 (490)
T 3jru_B 328 DVITSMSGKTIEVGNTDAEGRLILCDALTYAERFNPEALVDVATLTGACMVALGHQTAGLMSKHD----DLANELLAAGE 403 (490)
T ss_dssp CEEECTTSCEEECSCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTTTCEEEEESCH----HHHHHHHHHHH
T ss_pred CEEEecCCcEEEecCCCchHhHHHHHHHHHHhhcCCCEEEEEcchHHHHHHHhCCCcEEEEeCCH----HHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HcCCceeecCCchhhHhhcCCCccccccCCCCCccchHHHHHHHhccCCCCeEEEeeccCcccCCCCCCchhhh
Q psy3774 375 MSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDKKGATVEL 448 (963)
Q Consensus 375 ~~ge~~W~lPl~~~y~~~l~s~~ADl~N~~~~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~~~~g~~~~l 448 (963)
++||++||||||++|+++++|++|||+|+++++||+||||+||++||+++||+|||||||+|.++.++|+|+.+
T Consensus 404 ~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~~~~~~kG~TG~~ 477 (490)
T 3jru_B 404 HVFDRAWRLPLWDEYQGLLDSTFADVYNIGGRWGGAITAGCFLSRFTENQRWAHLDIAGVASDEGKRGMATGRP 477 (490)
T ss_dssp HTTCCEEECCCCGGGGGGGCCSSSSEESCCCSSCHHHHHHHHHHTTCTTSCEEEEECTTTSBCSSTTCCBCCTT
T ss_pred HhCCceEeCCCCHHHHhhcCCCeeeeeCCCCCchHHHHHHHHHHHhCCCCCEEEEecCCcCcCCCCCCCCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999887788877654
No 10
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=100.00 E-value=1.3e-127 Score=1109.74 Aligned_cols=441 Identities=46% Similarity=0.812 Sum_probs=399.6
Q ss_pred CCCEEEEEEecCCCcCcccccCC--cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc-----------
Q psy3774 4 KTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN----------- 70 (963)
Q Consensus 4 ~ad~lVvgV~e~~~l~~~~~~ld--~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~----------- 70 (963)
+.|+|||+|++++.+++..+.+| +.+.+.++++..+|+||.|+++.++.+++...+|+++||+|+.+
T Consensus 14 ~~~~lvv~v~~~~~l~~~~~~~~~~~~~~l~~~~~~~~f~gk~g~~~~~~~~~~~~~~~v~lvGlG~~~~~~~~~~r~a~ 93 (503)
T 1gyt_A 14 RSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVI 93 (503)
T ss_dssp CSSCEEEEEETTTEECHHHHHHHTTSSSHHHHHHHHTSCCCCTTCEEEEESCTTCSSSEEEEEECCSTTCCCHHHHHHHH
T ss_pred CCCEEEEEEecCCccchHHHHHhHHhHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEEEcCchhhcCHHHHHHHH
Confidence 56999999999877777666677 88999999999999999999999998777678999999999874
Q ss_pred --c------------ccccCcccccccchhHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecC-CChhhHHHH
Q psy3774 71 --L------------LLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDE-KNYIDGKNA 135 (963)
Q Consensus 71 --~------------~~~l~~~~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~-~~~~~~~~~ 135 (963)
+ .+.+..+..+..+..+..+++++|+.++.|+|++||+++++++..++++.++.+. .+.+..++.
T Consensus 94 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~g~~l~~Y~f~~~k~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 173 (503)
T 1gyt_A 94 QKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERA 173 (503)
T ss_dssp HHHHHHHHHSCCSEEEECGGGSCBTTBCHHHHHHHHHHHHHHHHCCCCTTCSSCCCCCCCCCEEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHhcCCceEEEEcccccccccccHHHHHHHHHHHHHhCccccccccccccccccccEEEEEecCccchHHHHHH
Confidence 0 0111111111111245678999999999999999999764333457788887642 113456788
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCC--CeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEE
Q psy3774 136 IIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK--MDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIK 213 (963)
Q Consensus 136 ~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~g--v~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~ 213 (963)
+++++++++++++||||+|+|||+|||++||++++++++++| ++|+|++++||+++|||+||+|||||++|||||+|+
T Consensus 174 ~~~~~~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~ 253 (503)
T 1gyt_A 174 IQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIE 253 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEE
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred EccCCC-CCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCC
Q psy3774 214 YMNGKF-KEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTK 292 (963)
Q Consensus 214 y~~~~~-~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~ 292 (963)
|+|.++ .++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++|+||+++||+|||||||+|||
T Consensus 254 Y~g~~~~~~~~i~LVGKGITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~l~vnV~~~i~~~ENm~sg~A~r 333 (503)
T 1gyt_A 254 YKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYR 333 (503)
T ss_dssp EECCCCTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCC
T ss_pred ECCCCCCCCCcEEEEcCceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcCCCeeEEEEEEeeccCCCCCCCC
Confidence 999765 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHH
Q psy3774 293 PGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRA 372 (963)
Q Consensus 293 pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a 372 (963)
||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+++|++|
T Consensus 334 PgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~P~~iID~ATLTGA~~vALG~~~ag~~sn~d----~l~~~l~~A 409 (503)
T 1gyt_A 334 PGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHN----PLAHELIAA 409 (503)
T ss_dssp TTCEEECTTSCEEECSCTTCCHHHHHHHHHHHGGGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCH----HHHHHHHHH
T ss_pred CCCEEEeCCCcEEEecCCCcchhhHhHHHHHHHHHcCCCEEEEhhhhHHHHHHHhCCCceEEEeCCH----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HhHcCCceeecCCchhhHhhcCCCccccccCCCCCccchHHHHHHHhccCCCCeEEEeeccCcccCCCCCCchhhh
Q psy3774 373 GKMSGDTAWNMPIEDRYQKQLKSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDKKGATVEL 448 (963)
Q Consensus 373 ~~~~ge~~W~lPl~~~y~~~l~s~~ADl~N~~~~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~~~~g~~~~l 448 (963)
|+.+||++||||||++|+++|+|++|||+|+++|.||+||||+||++||+++||+|||||||+|..+.++|+|+.+
T Consensus 410 g~~~ge~~WrmPl~~~y~~~l~S~~ADl~N~g~~~~GsitAA~FL~~Fv~~~~WaHlDIAG~a~~~~~~kg~TG~~ 485 (503)
T 1gyt_A 410 SEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRP 485 (503)
T ss_dssp HHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSEECGGGCEECCTT
T ss_pred HHHhCCceeeCCCCHHHHHHcCCchhhhcCCCCCCCchhHHHHHHHHhCCCCCEEEEecCccCcCCCCCCCcEeHH
Confidence 9999999999999999999999999999999989999999999999999999999999999999877777777553
No 11
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=100.00 E-value=1.3e-126 Score=1078.97 Aligned_cols=422 Identities=29% Similarity=0.396 Sum_probs=377.7
Q ss_pred chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEEEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcc
Q psy3774 498 KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKI 577 (963)
Q Consensus 498 ~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllvGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~ 577 (963)
+.+.++++++..+|+||.||++.++..++ ..++++||||+ ..+ |.+++.++|.|.. ....+.++..
T Consensus 55 ~~~~~~~~l~~~~f~gk~G~~~~lp~~~g--~~~~~lvGlG~-~~~------r~a~g~~ar~L~~---g~~~~~~~~~-- 120 (482)
T 3ij3_A 55 QDARTQQWVKASGFVGLAGTICSIPESTG--ALQRVLLGVSD-YEY------SWDFGGLSKVLPP---GAFQLNRDDF-- 120 (482)
T ss_dssp SCHHHHHHHHHHTCCCCTTCEEEEECTTS--SEEEEEEECSS-TTC------CGGGGGHHHHCCS---EEEECCGGGS--
T ss_pred hhHHHHHHHHhCCCCCCCCCEEEEecCCC--ceEEEEEEeCC-hhH------HHHHHHHHHhccc---CcEEEecccc--
Confidence 67889999999999999999999997654 34679999998 442 5677788887762 2233322211
Q ss_pred cccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCceEEEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy3774 578 EKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANIC 657 (963)
Q Consensus 578 ~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~l 657 (963)
. .....++++||+.|+.|+|++||+++++. .++ ... +.. . ++++++++++++||||+|+|||+|
T Consensus 121 --~-~~~~~~~~aeG~~Lg~Y~f~~yks~~~~~----~~l--~~~----~~~-~--~~~~~~a~~~~laRdLvn~P~N~~ 184 (482)
T 3ij3_A 121 --E-DDEYYERALLAFGLGSYQFNAYRKRSPYL----AKL--FLP----QAH-R--KRVTDWLTTIYLIRDLINTPAEDM 184 (482)
T ss_dssp --S-SHHHHHHHHHHHHHTTCCCCSSSCCCCCS----EEE--ECC----HHH-H--HHHHHHHHHHHHHHHHHHSCGGGS
T ss_pred --C-ChHHHHHHHHHHHhcceecccccCCCCCC----cEE--Eec----chh-H--HHHHHHHHHHHHHHHHhcCCcccc
Confidence 0 12357899999999999999999986432 233 332 111 1 789999999999999999999999
Q ss_pred ChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCC
Q psy3774 658 TPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISI 737 (963)
Q Consensus 658 tP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGisl 737 (963)
||++||++++++++++|++|+|+++++ +++|||+||+|||||++|||||+|+|.+ +++++|+|||||||||||||||
T Consensus 185 tP~~~A~~a~~la~~~g~~v~V~~~~~-~~~gmg~~laVg~GS~~pPrli~l~y~~--~~~~~i~LVGKGITFDsGGlsl 261 (482)
T 3ij3_A 185 GPSELAQAVKHVAKEFEAKVKIIESKD-LETEFPAIYAVGRAGSRPPLLIDLKWGD--IKAPKVTLVGKGVCFDSGGLDI 261 (482)
T ss_dssp SHHHHHHHHHHHHHHHTCEEEEEEHHH-HHHHCHHHHHHHTTSSSCCEEEEEEESC--TTSCEEEEEECEEEEECCTTSC
T ss_pred CHHHHHHHHHHHHHHcCCeEEEEchHH-HHcCCCcEEEEccCCCCCCEEEEEEeCC--CCCCeEEEEccceEeecCCccC
Confidence 999999999999999999999999999 8899999999999999999999999943 3468999999999999999999
Q ss_pred CCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhh
Q psy3774 738 KPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCD 817 (963)
Q Consensus 738 Kp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLAD 817 (963)
||+.+|++||+||+|||+|+|+|++++++++|+||+++||+|||||||+|||||||||+||||||||.||||||||||||
T Consensus 262 Kp~~~M~~MK~DMgGAAaVlg~~~aia~l~lpvnv~~ii~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLAD 341 (482)
T 3ij3_A 262 KTPGGMLLMKKDMGGAAHALGLARMIMLQQLPVRLRLLIPAVENAIGSRSYRPGDVVQTRARKTIEITNTDAEGRVVLAD 341 (482)
T ss_dssp CCHHHHTTGGGGGHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHH
T ss_pred cCccchhhccccchHHHHHHHHHHHHHHcCCCceEEEEEEeeccCCCCCCCCCCCEEEeCCCCEEEEecCCcchhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCcEEEEecchhHHHHHhhCCCceEEeeCCccchHHHHHHHHHHHhHcCCcEeeCCCChhhHhhcCCCcccc
Q psy3774 818 ALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADI 897 (963)
Q Consensus 818 aL~Ya~~~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~~~lkS~vADl 897 (963)
+|+||++++|+.|||+|||||||++|||++++|+||||| +|+++|++||+.+||++||||||++|+++|||++|||
T Consensus 342 aL~yA~~~~P~~iID~ATLTGA~~vALG~~~agv~sn~d----~l~~~l~~Ag~~~ge~~WrlPl~~~y~~~l~S~vADl 417 (482)
T 3ij3_A 342 ALAEAVKEDPDLIIDFSTLTGAARIALGPNLPALFANQD----SLAQALIDASLKTDDPLWRLPLFQPYRNYLKSEVADL 417 (482)
T ss_dssp HHHHHHTTCCSEEEEEEECCSGGGCTTCTTSCEEEESSH----HHHHHHHHHHHHHTCCCEECCCCGGGGGGGCCSSSSE
T ss_pred HHHHHHhcCCCEEEEecchhhhHHHHhCCCceEEEeCCH----HHHHHHHHHHHHHCCceeeCCCCHHHHHhcCCCeeee
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred cCCC-CCCcchhHHHHHHHhccCC-CCeEEEeeccCCccC--CCCCCCCcchHHHHHHHHHhh
Q psy3774 898 SNIG-NSSADSITAACFLENFTKK-YVWAHLDIAGVAWKS--GDKKGATGRPVTLLTYYLMLK 956 (963)
Q Consensus 898 ~N~g-~~~~GaitAA~FL~~Fv~~-~pWaHLDIAG~a~~~--~~~kGaTG~gvr~L~~~l~~~ 956 (963)
+|+| +|+||+||||+||++||++ +||+||||||.+... ..|+|+||+|||+|++||+++
T Consensus 418 ~N~g~~~~~GsitAA~FL~~Fv~~~~~WaHlDIAg~~~~~~~~~p~GatG~gvR~l~~~l~~~ 480 (482)
T 3ij3_A 418 TNSSQNRMAGAITAALFLQHFVSDQIPWAHFDIFAWNLEDLPGRPIGGEAMALRAVFHYLEQQ 480 (482)
T ss_dssp ESSCSSSSCHHHHHHHHHHTTSCTTSCEEEEEECCEESSCBTTBCSEECCCSHHHHHHHHHHH
T ss_pred eCCCCCCCcchhHHHHHHHHHcCCCCCeEEEEcccccCCCCCCCCCCchhHHHHHHHHHHHHh
Confidence 9998 6999999999999999986 599999999743322 248999999999999999876
No 12
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=100.00 E-value=7e-126 Score=1082.58 Aligned_cols=429 Identities=37% Similarity=0.603 Sum_probs=365.2
Q ss_pred cCCCEEEEEEecCCCcCcccccCCcHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc------------
Q psy3774 3 LKTDCLVVGIFKKNKLSSIVKDIDKYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN------------ 70 (963)
Q Consensus 3 ~~ad~lVvgV~e~~~l~~~~~~ld~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~------------ 70 (963)
.++|+|||||+++.++++.+. .+.+.++++..+|+||.|+++.++.++ +||++||||+.+
T Consensus 12 ~~~d~lvv~v~~~~~l~~~~~----~~~l~~~~~~~~f~gk~G~~~~l~~~~----~~v~lvGlG~~~~~~~~~~r~a~~ 83 (486)
T 3pei_A 12 LAAELMIVAQENLQKLVEQTK----CPNSKALLDRRIFKAKSGEVLPLLHGD----KIVILLGLGLRQDFIASEYDKIIA 83 (486)
T ss_dssp SSEEEEEECGGGHHHHHHHC------------CTTTSCCCCTTCEEEECCSS----SEEEEEECCCGGGCCGGGHHHHHH
T ss_pred CcCCEEEEEEeCCCccCcccc----hHHHHHHHHhCCCCCCCCCEEEEeCCC----CeEEEEEcCCcccCCHHHHHHHHH
Confidence 568999999998755544332 778999999999999999999998754 799999999864
Q ss_pred -------------cccccCcccccccchhHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecCCChhhHHHHHH
Q psy3774 71 -------------LLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAII 137 (963)
Q Consensus 71 -------------~~~~l~~~~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~~~~~ 137 (963)
+.+.++.+.. ..+..+.++++++|+.++.|+|++||++++ ++.+++++++.... ...++.++
T Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~--~~~~~~~~l~~~~~--~~~~~~~~ 158 (486)
T 3pei_A 84 KAAEQLKKLAIKEISVDIDYAFE-NDNVKQFTLDTVRALISETYVFDQLKTEKE--NYSLEQIELVYSGD--QDIEDSAK 158 (486)
T ss_dssp HHHHHHHHTTCCEEEEECTTSCS-SSCHHHHHHHHHHHHHHHTCCCCTTCSSCC--CCCCCEEEEECCSS--SCCHHHHH
T ss_pred HHHHHHhhcCceEEEEEeccccc-ccchHHHHHHHHHHHHHcCcccccccCCCC--CCcccEEEEecCCh--HHHHHHHH
Confidence 0111121111 124456788999999999999999999763 34577888874211 34578899
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcC-CCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEcc
Q psy3774 138 YGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDY-KMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMN 216 (963)
Q Consensus 138 ~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~-gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~~ 216 (963)
+++++++++++||||+|+|||+|||++||++++++++++ |++|+|++++||+++|||+||+|||||++|||||+|+|+|
T Consensus 159 ~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g 238 (486)
T 3pei_A 159 IGSAIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKG 238 (486)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECC
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCCcE
Q psy3774 217 GKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDI 296 (963)
Q Consensus 217 ~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pgDV 296 (963)
.++.++||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||+++||+|||||||+|||||||
T Consensus 239 ~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~i~~~ENm~sg~A~rPgDV 318 (486)
T 3pei_A 239 GNEGDAPIVLVGKGLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLNLPVNVVGVMGLAENAVDARSYRPGDV 318 (486)
T ss_dssp SCTTSCCEEEEEEEEETEECC------------EECSHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEC------CCTTEE
T ss_pred CCCCCCcEEEEccceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHcCCCcEEEEEEEeeccCCCCCCCCCCCE
Confidence 77777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHHHhHc
Q psy3774 297 VVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMS 376 (963)
Q Consensus 297 i~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a~~~~ 376 (963)
||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+++|++||+.+
T Consensus 319 its~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGA~~vALG~~~~g~~sn~d----~l~~~l~~ag~~~ 394 (486)
T 3pei_A 319 LKSMKGITVEVSNTDAEGRLVLCDTLTYIGKYKPKAVIDLATLTGAMIISLGDAYSGMFANSD----KLANSLEQAANAS 394 (486)
T ss_dssp EECTTCCEEEECCGGGHHHHHHHHHHHHGGGGCCSEEEEEECCCTHHHHHHTTSCEEEEESCH----HHHHHHHHHHHHH
T ss_pred EEeCCCcEEEEeccCcccceeehhHHHHHHhhCCCEEEEehhhHHHHHHHhCCCceEEEeCCH----HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCceeecCCchhhHhhcCCCccccccCC-CCCccchHHHHHHHhccCCCCeEEEeeccCcccCCCCCCchhhh
Q psy3774 377 GDTAWNMPIEDRYQKQLKSNFADISNIG-NSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGDKKGATVEL 448 (963)
Q Consensus 377 ge~~W~lPl~~~y~~~l~s~~ADl~N~~-~~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~~~~g~~~~l 448 (963)
||++||||||++|+++++|++|||+|++ +|.||+||||+||++||++.||+|||||||+|.++.++|+|+..
T Consensus 395 ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~~g~itAA~FL~~Fv~~~~W~HlDIAG~a~~~~~~~g~TG~~ 467 (486)
T 3pei_A 395 NDLIWRLPLHKPYLKKIESKVADMDNCGRDRSAGSIVAALFLSKFTEDYEWAHLDIAGSAMGDFASCKASGRP 467 (486)
T ss_dssp CCCEEECCCCGGGGGGGCCSSSSEESSCSSSTTHHHHHHHHHHTTCTTSCEEEEECHHHHHCC-CCCCCCCTT
T ss_pred CCCeEeCCCCHHHHHHCCCCeeeeeCCCCCCCcchHHHHHHHHHhCCCCCEEEEecCCCCcCCCCCCCcccHH
Confidence 9999999999999999999999999998 78999999999999999999999999999999888788877553
No 13
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-124 Score=1070.92 Aligned_cols=436 Identities=30% Similarity=0.463 Sum_probs=392.9
Q ss_pred cCCCEEEEEEecCCCcCcccccCC--cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc----------
Q psy3774 3 LKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN---------- 70 (963)
Q Consensus 3 ~~ad~lVvgV~e~~~l~~~~~~ld--~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~---------- 70 (963)
...|+|||+++++..+.+....+| +.+.|++++++++|+++.|++..++...+...+||++||||+.+
T Consensus 35 ~~~d~lvig~~~~~~~~~~~~~~Deal~g~L~~l~~~~~F~gk~G~~~~~~~~~~~~~~rvllvGlGk~~~~~~~~~r~~ 114 (515)
T 3kzw_A 35 NEINTLIIGIPEHLNQLERISFNHIDITESLERLKHQHIIGSKVGKIYTTAFDVQDQTYRLITVGLGNLKTRSYQDMLKI 114 (515)
T ss_dssp TTCCEEEEEEESCGGGSCCCEETTEECHHHHHHHHHTTSSCCSBTCEEEEEEEETTEEEEEEEEEEECSTTCCHHHHHHH
T ss_pred CCCCEEEEEEeCCcccccchHHHHHHHHHHHHHHHhcCccCCCCCCeEEEEecCCCCcCEEEEEEcCCcccCCHHHHHHH
Confidence 357999999999866666778888 99999999999999999999887765445578999999999975
Q ss_pred ---------------cccccCcccccccchhHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecCCChhhHH-H
Q psy3774 71 ---------------LLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGK-N 134 (963)
Q Consensus 71 ---------------~~~~l~~~~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~-~ 134 (963)
+.+.++.+.....+..+.++.+++|+.++.|+|++||++++++ ...++.+. . . ...+ +
T Consensus 115 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~Y~f~~yks~~~~~--~~~~l~~~-~-~--~~~~~~ 188 (515)
T 3kzw_A 115 WGHLFQYIKSEHIEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAP--FKTNLNLI-S-E--SLIELD 188 (515)
T ss_dssp HHHHHHHHHHTTCCEEEEEGGGTCCSSSCHHHHHHHHHHHHHHTTCCCCTTCTTCCCC--CCEEEEEE-C-S--SCCCCH
T ss_pred HHHHHHHHhhcCCceEEEEcccccccccCHHHHHHHHHHHHHhCceecccccCCCCCC--cceEEEEc-C-c--chhHHH
Confidence 1122233333334556788899999999999999999976432 22234442 2 1 1233 7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 135 AIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 135 ~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
.|++++++++++++||||+|+|||+|||++||++++++++++|++|+|++++||+++|||+||+|||||++|||||+|+|
T Consensus 189 ~~~~~~~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y 268 (515)
T 3kzw_A 189 FIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITY 268 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCC
Q psy3774 215 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPG 294 (963)
Q Consensus 215 ~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pg 294 (963)
+|.++.++||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||++++|+|||||||+|||||
T Consensus 269 ~g~~~~~~~i~LVGKGiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~lpvnv~~~i~~~ENm~sg~A~rPg 348 (515)
T 3kzw_A 269 NGKDKDEAPIALVGKGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPD 348 (515)
T ss_dssp ESSCSSCCCEEEEEEEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTTCSCEEEEEEEEEEECCCTTCCCTT
T ss_pred CCCCCCCCcEEEecCceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcCCCceEEEEEEeeccCCCCCCCCCC
Confidence 99877779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeC-ChhchHHHHHHHHHHH
Q psy3774 295 DIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSR-NDEKHTKLVLDLLRAG 373 (963)
Q Consensus 295 DVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n-~~~~~~~l~~~l~~a~ 373 (963)
||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+| || +|++++.+||
T Consensus 349 DVits~~GkTVEV~NTDAEGRLvLADaL~yA~~~~p~~iiD~ATLTGA~~vALG~~~ag~~~~n~d----~l~~~l~~a~ 424 (515)
T 3kzw_A 349 DVFTALSGETVEVMNTDAEGRLVLADAVFYANQYQPSVIMDFATLTGAAIVALGDDKAAAFESNSK----VILNDILQIS 424 (515)
T ss_dssp CEEECTTSCEEECSCTTCCHHHHHHHHHHHHHTTCCSEEEEEECCCHHHHHHHCTTCEEEEEESCH----HHHHHHHHHH
T ss_pred CEEEeCCCCEEEecCCCcchheehHHHHHHHhhcCCCEEEEeecchHHHHHHcCCceeEEeeCChH----HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986 57 8999999999
Q ss_pred hHcCCceeecCCchhhHhhc-CCCccccccCCCCCccchHHHHHHHhccCCCCeEEEeeccCcccCCC----CCCchhhh
Q psy3774 374 KMSGDTAWNMPIEDRYQKQL-KSNFADISNIGNSSADSITAACFLENFTKKYVWAHLDIAGVAWKSGD----KKGATVEL 448 (963)
Q Consensus 374 ~~~ge~~W~lPl~~~y~~~l-~s~~ADl~N~~~~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~~----~~g~~~~l 448 (963)
+.+||++||||||++|++++ +|++|||+|+++++||+||||+||++||+++||+|||||||+|.++. |+|+|+..
T Consensus 425 ~~~ge~~WrlPl~~~y~~~l~~S~vADl~N~g~~~ggaitAA~FL~~Fv~~~~W~HlDIAG~a~~~~~~~~~~kGaTG~~ 504 (515)
T 3kzw_A 425 SEVDEMVFELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSGQTPHIHFDIAGPATTNKASYNGPKGPTGFM 504 (515)
T ss_dssp HHTTCCEEECCCCHHHHHHTTCCSSSSEESCCSSSCHHHHHHHHHHGGGTTSCEEEEECTTTTEESSCBTTBSSEECCTT
T ss_pred HHhCCceecCCCCHHHHHhhcCCCcccccCCCCCchhhHHHHHHHHHhCCCCCEEEEECCccCccCCCCCCCCCCccccc
Confidence 99999999999999999998 79999999999899999999999999999999999999999998753 67777553
No 14
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=100.00 E-value=2e-124 Score=1068.56 Aligned_cols=441 Identities=33% Similarity=0.490 Sum_probs=395.3
Q ss_pred CcCCCEEEEEEecCCCcCcccccCC--cHHHHHHHHHcC---CCCCCCCCEEEEcccCC-CcccEEEEEeccCcc-----
Q psy3774 2 SLKTDCLVVGIFKKNKLSSIVKDID--KYGEITNILKSG---DLNEKLGSTLLLRNIQK-INAKRILLVNLGASN----- 70 (963)
Q Consensus 2 ~~~ad~lVvgV~e~~~l~~~~~~ld--~~g~l~~~l~~~---~f~gk~G~~~~l~~~~~-~~~~rv~lvGlGk~~----- 70 (963)
+.+.|++||+|+++++++..++.+| ++|.|+++++++ +|+||.|+++.++.++. ...+||++||||+.+
T Consensus 39 ~~~~~l~Vv~V~e~~~l~G~ak~lD~as~G~Is~llk~G~~~~f~Gk~g~~~~l~~~~~~~~~~rvllVGlGk~~~l~~~ 118 (528)
T 3kr4_A 39 NVEEGLTIFLVNNPGKENGPVKISSKVNDKQVSEFLKDENMEKFNVKLGTSKHFYMFNDNKNSVAVGYVGCGSVADLSEA 118 (528)
T ss_dssp CCCSSEEEEEECCSSSTTCBCCCCSCBSCHHHHHHTSHHHHTTSBCCTTCEEEEEEECTTSCEEEEEEEECCSCSSCCHH
T ss_pred cCCCCeEEEEecCCcccCccHHHHHHHHHHHHHHHHHcCCcCcceeCCCCEEEEecCCCCCCccEEEEEECCCcccCCHH
Confidence 3567999999999999999999999 999999999995 89999999999986543 467899999999975
Q ss_pred --------cccccC-----cc--cccccchhHHHHHHHHHHHhccccccccccCCCCc-ccCccEEEEEecCCChhhHHH
Q psy3774 71 --------LLLMLP-----FN--KIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPI-KINIKKIIFALDEKNYIDGKN 134 (963)
Q Consensus 71 --------~~~~l~-----~~--~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~-~~~~~~l~l~~~~~~~~~~~~ 134 (963)
+.-.+. .+ ..+........+++++|++++.|+|++|||+++++ ++.+++++++... .+..++
T Consensus 119 ~~r~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~eg~~l~~y~f~~yks~~~~~~~~~l~~~~~~~~~--~~~~~~ 196 (528)
T 3kr4_A 119 DMKRVVLSLVTMLHDNKLSKLTVVFEINVDKNLFRFFLETLFYEYMTDERFKSTDKNVNMEYIKHLGVYINN--ADTYKE 196 (528)
T ss_dssp HHHHHHHHHHHHHTTSCCSEEEEEECSCCCHHHHHHHHHHHHHHHCCCCTTCSTTCCC-CCCCSEEEEEETT--GGGTTH
T ss_pred HHHHHHHHHHHHHhhcCccEEEEeccCCCcHHHHHHHHHHHHhhhccccccccCCCcccccCceEEEEEeCC--hHHHHH
Confidence 000111 01 01111112346788999999999999999976532 3457888887642 345678
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 135 AIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 135 ~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
.+++++++++|+++||||+|+|||+|||++||++++++++++|++|+|++++||+++|||+||+|||||++|||||+|+|
T Consensus 197 ~~~~~~~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y 276 (528)
T 3kr4_A 197 EVEKARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTY 276 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcEEEcccceEEecCCCCCCCCCC--ccccccchhhHHHHHHHHHHHHhcCC-CcEEEEEEEeeecCCCCCCC
Q psy3774 215 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYS--MDEMKYDMCGAASILGTLYAISEMNL-ELNIIGVIVASENMLSGNST 291 (963)
Q Consensus 215 ~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~--M~~Mk~Dm~GaAaV~g~~~a~a~l~l-~vnv~~~~~~~EN~~~~~a~ 291 (963)
+|.++.++||+|||||||||||||||||+.+ |++||+||||||+|+|+|+++++|++ |+||++++|+|||||||+||
T Consensus 277 ~g~~~~~~~iaLVGKGITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~~~~vnv~~vi~~~ENm~sg~A~ 356 (528)
T 3kr4_A 277 KSKGDVKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCENMVSKNSY 356 (528)
T ss_dssp ECSSCCCEEEEEEEEEEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHCCSSEEEEEEEEEEEECCSTTSC
T ss_pred cCCCCCCCcEEEecCceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcCCCCceEEEEEEeeccCCCCCCC
Confidence 9987777899999999999999999999865 99999999999999999999999999 59999999999999999999
Q ss_pred CCCcEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHH
Q psy3774 292 KPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLR 371 (963)
Q Consensus 292 ~pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~ 371 (963)
|||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+++|.+
T Consensus 357 rPgDVit~~~GkTVEV~NTDAEGRLvLADaL~yA~~~~p~~iID~ATLTGA~~vALG~~~agv~sn~d----~l~~~l~~ 432 (528)
T 3kr4_A 357 RPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKLGVDYIVDIATLTGAMLYSLGTSYAGVFGNNE----ELINKILQ 432 (528)
T ss_dssp CTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHHTCCSEEEEEECCCTTHHHHTTTTCEEEEESCH----HHHHHHHH
T ss_pred CCCCEEEeCCCcEEEEecCCchhhhhhHHHHHHHHhhCCCEEEEeecchHHHHHHhCCCceEEEeCCH----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHhHcCCceeecCCchhhHhhcCCCccccccCCC-CCccchHHHHHHHhccCCCCeEEEeeccCcccCC--CCCCchhhh
Q psy3774 372 AGKMSGDTAWNMPIEDRYQKQLKSNFADISNIGN-SSADSITAACFLENFTKKYVWAHLDIAGVAWKSG--DKKGATVEL 448 (963)
Q Consensus 372 a~~~~ge~~W~lPl~~~y~~~l~s~~ADl~N~~~-~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~--~~~g~~~~l 448 (963)
||+++||++||||||++|+++|+|++|||+|+++ ++||+||||+||++||+++||+|||||||+|... +++|.++.+
T Consensus 433 Ag~~~ge~~WrlPl~~~y~~~l~S~vADl~N~g~~~~agsitAA~FL~~Fv~~~~WaHlDIAG~a~~~~~~gaTG~gVr~ 512 (528)
T 3kr4_A 433 SSKTSNEPVWWLPIINEYRATLNSKYADINQISSSVKASSIVASLFLKEFVQNTAWAHIDIAGVSWNFKARKPKGFGVRL 512 (528)
T ss_dssp HHHHHTCCEEECCCCGGGGGGGCCSSSSEESSCSSCCCHHHHHHHHHHTTCSSSEEEEEECTTTSEETTTTEECCTTHHH
T ss_pred HHHHcCCcEEeCCCCHHHHhhcCCceeccccCCCCCCcHHHHHHHHHHHhCCCCCEEEEECCCCccCCCCCCceehhHHH
Confidence 9999999999999999999999999999999974 7899999999999999999999999999999653 345554444
No 15
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=100.00 E-value=4.9e-123 Score=1064.72 Aligned_cols=427 Identities=36% Similarity=0.544 Sum_probs=383.7
Q ss_pred CCEEEEEEecCC------CcCcccccCC--cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcccc----
Q psy3774 5 TDCLVVGIFKKN------KLSSIVKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASNLL---- 72 (963)
Q Consensus 5 ad~lVvgV~e~~------~l~~~~~~ld--~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~~~---- 72 (963)
.++|||||++++ .+++..+.+| +.+.+.++++..+|+||.|+++.++.+++ ..+||++||||+....
T Consensus 1 ~~~lvvgv~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~f~gk~g~~~~~~~~~~-~~~~v~lvGlG~~~~~~~~~ 79 (484)
T 1lam_A 1 TKGLVLGIYSKEKEEDEPQFTSAGENFNKLVSGKLREILNISGPPLKAGKTRTFYGLHE-DFPSVVVVGLGKKTAGIDEQ 79 (484)
T ss_dssp CEEEEEEECCCCTTCSSCCBCHHHHHHHHHTTTHHHHHHHHTCSCCCTTCEEEEEEEET-TEEEEEEEECCCTTCCEETT
T ss_pred CcEEEEEEecCCccccccccCHHHHHHhHHhHHHHHHHHHhCCCCCCCCcEEEEeCCCC-CcCEEEEEEeCcchhcccch
Confidence 378999999864 2566667777 88999999999999999999999987654 6799999999986310
Q ss_pred ------------------cccC-----cccccccchhHHHHHHHHHHHhccccccccccCCCCcccCccEEEEEecCCCh
Q psy3774 73 ------------------LMLP-----FNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNY 129 (963)
Q Consensus 73 ------------------~~l~-----~~~~~~~d~~~~~~~~~eg~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~ 129 (963)
-.+. .+.++ ..+..+++++|+.++.|+|++||+++++ +.++.++..
T Consensus 80 ~~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~---~~~~~~~~a~G~~l~~Y~f~~~k~~~~~----~~~~~~~~~---- 148 (484)
T 1lam_A 80 ENWHEGKENIRAAVAAGCRQIQDLEIPSVEVD---PCGDAQAAAEGAVLGLYEYDDLKQKRKV----VVSAKLHGS---- 148 (484)
T ss_dssp TTEEHHHHHHHHHHHHHHHHHHHTTCSEEEEC---CTTCHHHHHHHHHHHHCCCCTTCSSCCC----CCEEEESSS----
T ss_pred hccccCHHHHHHHHHHHHHHHhhcCCeEEEeC---CchHHHHHHHHHHHhCcccCccccCCCC----CceEEEecc----
Confidence 0011 11111 1234678999999999999999976432 345666432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCC--CeEEEeCHHHHHHhcCCeEeeecCCCCCCC
Q psy3774 130 IDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK--MDIEIINREQMQRLKMGSLLSVTHGSSEPP 207 (963)
Q Consensus 130 ~~~~~~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~g--v~v~v~~~~~l~~~gm~~~laVg~gS~~~p 207 (963)
..++.+++++++++++++||||+|+|||+|||++||++++++++++| ++|+|++++||+++|||+||+|||||++||
T Consensus 149 -~~~~~~~~~~~~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pP 227 (484)
T 1lam_A 149 -EDQEAWQRGVLFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPP 227 (484)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCC
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCC
Confidence 23677999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred eEEEEEEccCC-CCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCC
Q psy3774 208 KLIIIKYMNGK-FKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENML 286 (963)
Q Consensus 208 ~li~l~y~~~~-~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~ 286 (963)
|||+|+|+|.+ +.++||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||+++||+|||||
T Consensus 228 rli~l~y~g~~~~~~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~l~vnv~~~i~~~ENm~ 307 (484)
T 1lam_A 228 VFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMP 307 (484)
T ss_dssp EEEEEEEECSSSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECC
T ss_pred eEEEEEECCCCCCCCCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcCCCeeEEEEEEeeccCC
Confidence 99999999976 45688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHH
Q psy3774 287 SGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLV 366 (963)
Q Consensus 287 ~~~a~~pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~ 366 (963)
||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||| +|+
T Consensus 308 sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d----~l~ 383 (484)
T 1lam_A 308 SGKANKPGDVVRARNGKTIQVDNTDAEGRLILADALCYAHTFNPKVIINAATLTGAMDIALGSGATGVFTNSS----WLW 383 (484)
T ss_dssp STTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHHTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCH----HHH
T ss_pred CCCCCCCCCEEEeCCCcEEEeecCCccceeeehhHHHHhhhcCCCEEEEecchHHHHHHHhCCCceEEEeCCH----HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHhHcCCceeecCCchhhHhhcCCC-ccccccCCC-CCccchHHHHHHHhccCCCCeEEEeeccCcccCCC----
Q psy3774 367 LDLLRAGKMSGDTAWNMPIEDRYQKQLKSN-FADISNIGN-SSADSITAACFLENFTKKYVWAHLDIAGVAWKSGD---- 440 (963)
Q Consensus 367 ~~l~~a~~~~ge~~W~lPl~~~y~~~l~s~-~ADl~N~~~-~~~g~~~AA~FL~~Fv~~~~w~HlDiAG~a~~~~~---- 440 (963)
++|++||+.+||++||||||++|+++|+|+ +|||+|+++ +.||+||||+||++||+++||+|||||||+|.++.
T Consensus 384 ~~l~~Ag~~~ge~~WrlPl~~~y~~~l~s~~~ADl~N~g~~~~~GsitAA~FL~~Fv~~~~WaHlDIAG~a~~~~~~~~~ 463 (484)
T 1lam_A 384 NKLFEASIETGDRVWRMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYL 463 (484)
T ss_dssp HHHHHHHHHHSCCEEECCCCHHHHHHHHCCSSSSEESSCSSSTTHHHHHHHHHHTTCCCSSEEEEECGGGSEESSSSTTS
T ss_pred HHHHHHHHHHCCcEeecCCCHHHHHhcCCCCEeeeeCCCCCCCcchHHHHHHHHHhCCCCCEEEEEcCcccccCCCCCCC
Confidence 999999999999999999999999999987 999999986 78999999999999999999999999999997643
Q ss_pred CCCchhhh
Q psy3774 441 KKGATVEL 448 (963)
Q Consensus 441 ~~g~~~~l 448 (963)
|+|+|+..
T Consensus 464 ~kG~TG~~ 471 (484)
T 1lam_A 464 RKGMAGRP 471 (484)
T ss_dssp CSEECCTT
T ss_pred CCCcEeHH
Confidence 66666543
No 16
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=100.00 E-value=1.4e-119 Score=1030.13 Aligned_cols=454 Identities=24% Similarity=0.330 Sum_probs=373.7
Q ss_pred ccCCCEEEEEEecC---CCccccccccC--chH---HHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEEEEcCCCCCcC
Q psy3774 473 SLKTDCLVVGIFKK---NKLSSIVKDID--KYG---EITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGDKKKKI 544 (963)
Q Consensus 473 ~~~~d~lVv~v~e~---~~l~~~~~~ld--~~g---~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vllvGLG~~~~~~ 544 (963)
....++|||++++. ..+++....+| ..+ .++++++....++ +...++.. ..|.+ ||++....
T Consensus 15 ~~~~~vlVlG~~~~~~~~~~t~~~~k~~~r~~gk~~ll~~~l~~~~~~~---~~~~f~~~-----~~Vav--Lg~~~~~~ 84 (491)
T 2hc9_A 15 DGLTSLIIVGKKSVLKNVTFEGKFKEVAQKFVTDGDSWNSMISRIPASG---RHPLHYEL-----AHLIT--VPDASSRG 84 (491)
T ss_dssp SSCEEEEEEEEHHHHHHCCSCHHHHHHHTTTSCCHHHHHHHHHHSCSSE---EEESSSSS-----EEEEE--ECSCCCTT
T ss_pred CccCcEEEEEeeccccCCCccHHHHHhhHhhccchHHHHHHHHhhCCCC---ceeEEecc-----cEEEE--ECCcccCC
Confidence 45678999999986 34555555555 334 4888888877777 44444432 33443 77733334
Q ss_pred CHHHHHHHHHHHHHHHhhcC-CceE-EEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCceEEEEEec
Q psy3774 545 KESNFIKIIQSIMNVFCNIG-ASNL-LLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINIKKIIFALD 622 (963)
Q Consensus 545 ~~~~~r~a~~~a~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l~~l~l~~~ 622 (963)
+.........+.+|.....+ .... .+.+.+ ..+ ..+...++....|.|+. |++++ ++...+++++..
T Consensus 85 n~~~~~~~~~e~vr~a~~~g~~~~~~~v~v~~------~~e--~~a~~~a~~~~~~~f~~-k~~~~--~~~~~~~~~~~~ 153 (491)
T 2hc9_A 85 NTPTNAHSIYKELKPINYPEDTKNVHFVLFAE------YPD--VLSHVAAIARTFCKFSM-KTSGI--RELNVNIDVVCD 153 (491)
T ss_dssp SCTTCHHHHHHHHTTCCCCTTCCEEEEEEECC------GGG--HHHHHHHHHTTSCCCCC-CSSCC--CCCEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHhcccCcCCceEEEEcC------chh--HHHHHHHHHHhccchhc-ccccC--CCCCceeeeccC
Confidence 43333333344444432222 1122 112211 111 22333344445555664 54433 233556777643
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCC
Q psy3774 623 EKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE 702 (963)
Q Consensus 623 ~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~ 702 (963)
. ..++.++++.++++++++||||+|+|||+|||++||++++++++++|++|+|+++++|+++|||+||+|||||.+
T Consensus 154 ~----~~~~~~~~~~~~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~ 229 (491)
T 2hc9_A 154 K----LTNEDAVFLTDLSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPT 229 (491)
T ss_dssp T----CCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSS
T ss_pred c----ccHHHHHHHHHHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCC
Confidence 1 235678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcCCCcEEEEEEEeeccC
Q psy3774 703 PPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENM 782 (963)
Q Consensus 703 ~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm 782 (963)
|||||+|+|+|.+ .+++|+|||||||||||||||||+.+|++||+||||||+|+|+|++++++++|+||+++||+||||
T Consensus 230 pPrli~l~y~~~~-~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~l~~~ENm 308 (491)
T 2hc9_A 230 PPAFVVLSHEVPG-STEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHGFSQTLHACLCIVENN 308 (491)
T ss_dssp CCEEEEEEECCTT-CSCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTTCCSEEEEEEEEEEEC
T ss_pred CCEEEEEEeCCCC-CCCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcCCCceEEEEEEeeecC
Confidence 9999999999975 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhh-cCCcEEEEecchhHHHHHhhCCCceEEeeCCccchHH
Q psy3774 783 LSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVER-FKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTK 861 (963)
Q Consensus 783 ~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~-~~p~~iIDiATLTGA~~vALG~~~ag~~sn~~~~~~~ 861 (963)
|||+|||||||||+||||||||.||||||||||||+|+||++ ++|+.|||+|||||||++|||++++|+||||| +
T Consensus 309 ~sg~A~rPgDVits~~GkTVEV~NTDAEGRLvLADaL~yA~~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d----~ 384 (491)
T 2hc9_A 309 VSPIANKPDDIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATTIFDMATLTGAQAWLSGRLHGAAMTNDE----Q 384 (491)
T ss_dssp CSTTSCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHHTTCCSEEEEEECCCTTHHHHHTTTSEEEEESCH----H
T ss_pred CCCCCCCCCCEEEeCCCcEEEEecCCccceeeehhHHHHHhhhcCCCEEEEecchHHHHHHHhCCCcEEEEECcH----H
Confidence 999999999999999999999999999999999999999976 89999999999999999999999999999999 9
Q ss_pred HHHHHHHHHhHcCCcEeeCCCChh-hHhhcCCCcccccCC--CCCC-cchhHHHHHHHhccC---CCCeEEEeeccCCcc
Q psy3774 862 LVLDLLRAGKMSGDTAWNMPIEDR-YQKQLKSNFADISNI--GNSS-ADSITAACFLENFTK---KYVWAHLDIAGVAWK 934 (963)
Q Consensus 862 l~~~l~~ag~~~gE~~W~lPl~~~-y~~~lkS~vADl~N~--g~~~-~GaitAA~FL~~Fv~---~~pWaHLDIAG~a~~ 934 (963)
|+++|++||+.+||++||||||++ |+++++|++|||+|+ |+|. ||+||||+||++|++ ++||+|||||||+|.
T Consensus 385 l~~~l~~Ag~~~ge~~WrlPl~~~~~~~~l~S~~ADl~N~~~~~~~~~gs~tAa~FL~~fv~~~~~~~W~HlDIAG~a~~ 464 (491)
T 2hc9_A 385 LENEIIKAGKASGDLVAPMLFAPDLFFGDLKSSIADMKNSNLGKMDGPPSAVAGLLIGAHIGFGEGLRWLHLDIAAPAEV 464 (491)
T ss_dssp HHHHHHHHHHHHSCCEEECCCCHHHHGGGGCCSSSSEESCCSSCCSSCHHHHHHHHHHTTTGGGTTSEEEEEECTTTTEE
T ss_pred HHHHHHHHHHHhCCcEecCCCChHHHHHhcCCchhhhcCCCCCCCCCCcHHHHHHHHHhhCCCCCCCCeEEEecCcccCC
Confidence 999999999999999999999976 689999999999999 4564 799999999999985 689999999999996
Q ss_pred CCCCCCCCcchHHHHHHHHHhhCCC
Q psy3774 935 SGDKKGATGRPVTLLTYYLMLKSPN 959 (963)
Q Consensus 935 ~~~~kGaTG~gvr~L~~~l~~~~~~ 959 (963)
++|+||||||+|++|+++++++
T Consensus 465 ---~~gaTG~gvr~L~~~l~~~~~~ 486 (491)
T 2hc9_A 465 ---GDRGTGYGPALFSTLLGKYTSV 486 (491)
T ss_dssp ---TTEECCCSHHHHHHHHGGGSSC
T ss_pred ---CCCceehhHHHHHHHHHHhccC
Confidence 4789999999999999988764
No 17
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=100.00 E-value=1.5e-116 Score=996.73 Aligned_cols=399 Identities=30% Similarity=0.434 Sum_probs=354.4
Q ss_pred cHHHHHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc-------cccccCc----ccccccchhHHHHHHHHH
Q psy3774 27 KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN-------LLLMLPF----NKIEKYNLSCLIIRTIII 95 (963)
Q Consensus 27 ~~g~l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~-------~~~~l~~----~~~~~~d~~~~~~~~~eg 95 (963)
+.+.+.++++..+|+||.|+++.++.+++. .++++||+|+.. +.-.++. +.++.......+++++||
T Consensus 55 ~~~~~~~~l~~~~f~gk~G~~~~lp~~~g~--~~~~lvGlG~~~~r~a~g~~ar~L~~g~~~~~~~~~~~~~~~~~~aeG 132 (482)
T 3ij3_A 55 QDARTQQWVKASGFVGLAGTICSIPESTGA--LQRVLLGVSDYEYSWDFGGLSKVLPPGAFQLNRDDFEDDEYYERALLA 132 (482)
T ss_dssp SCHHHHHHHHHHTCCCCTTCEEEEECTTSS--EEEEEEECSSTTCCGGGGGHHHHCCSEEEECCGGGSSSHHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCCCCCCCEEEEecCCCc--eEEEEEEeCChhHHHHHHHHHHhcccCcEEEeccccCChHHHHHHHHH
Confidence 678999999999999999999999976543 467899999864 1112221 111100022357889999
Q ss_pred HHhccccccccccCCCCcccCccEEEEEecCCChhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhc
Q psy3774 96 ISDNLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFD 175 (963)
Q Consensus 96 ~~l~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~ 175 (963)
+.|+.|+|++||++++++ .+ +... + . . . ++++++++++++||||+|+|||+|||++||+++++++++
T Consensus 133 ~~Lg~Y~f~~yks~~~~~----~~--l~~~--~--~-~-~-~~~~~~a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~ 199 (482)
T 3ij3_A 133 FGLGSYQFNAYRKRSPYL----AK--LFLP--Q--A-H-R-KRVTDWLTTIYLIRDLINTPAEDMGPSELAQAVKHVAKE 199 (482)
T ss_dssp HHHTTCCCCSSSCCCCCS----EE--EECC--H--H-H-H-HHHHHHHHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHH
T ss_pred HHhcceecccccCCCCCC----cE--EEec--c--h-h-H-HHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHH
Confidence 999999999999976422 23 3332 1 1 1 2 789999999999999999999999999999999999999
Q ss_pred CCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhh
Q psy3774 176 YKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCG 255 (963)
Q Consensus 176 ~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~G 255 (963)
+|++|+|+++++ +++|||+||+|||||++|||||+|+|.+ +.+++|+|||||||||||||||||+.+|.+||+||+|
T Consensus 200 ~g~~v~V~~~~~-~~~gmg~~laVg~GS~~pPrli~l~y~~--~~~~~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgG 276 (482)
T 3ij3_A 200 FEAKVKIIESKD-LETEFPAIYAVGRAGSRPPLLIDLKWGD--IKAPKVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGG 276 (482)
T ss_dssp HTCEEEEEEHHH-HHHHCHHHHHHHTTSSSCCEEEEEEESC--TTSCEEEEEECEEEEECCTTSCCCHHHHTTGGGGGHH
T ss_pred cCCeEEEEchHH-HHcCCCcEEEEccCCCCCCEEEEEEeCC--CCCCeEEEEccceEeecCCccCcCccchhhccccchH
Confidence 999999999999 8999999999999999999999999943 3468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCCcEEEecCceEEEeecCCcccceeehhhhhhhhhcCCcEEEE
Q psy3774 256 AASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVID 335 (963)
Q Consensus 256 aAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p~~iiD 335 (963)
||+|+|+|++++++++|+||+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||
T Consensus 277 AAaVlg~~~aia~l~lpvnv~~ii~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~P~~iID 356 (482)
T 3ij3_A 277 AAHALGLARMIMLQQLPVRLRLLIPAVENAIGSRSYRPGDVVQTRARKTIEITNTDAEGRVVLADALAEAVKEDPDLIID 356 (482)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEEeeccCCCCCCCCCCCEEEeCCCCEEEEecCCcchhhhhHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHHHhHcCCceeecCCchhhHhhcCCCccccccCC-CCCccchHHH
Q psy3774 336 IATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQKQLKSNFADISNIG-NSSADSITAA 414 (963)
Q Consensus 336 ~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a~~~~ge~~W~lPl~~~y~~~l~s~~ADl~N~~-~~~~g~~~AA 414 (963)
+|||||||++|||++++|+|+||| +|+++|++||+.+||++||||||++|+++|+|++|||+|++ +|+||+||||
T Consensus 357 ~ATLTGA~~vALG~~~agv~sn~d----~l~~~l~~Ag~~~ge~~WrlPl~~~y~~~l~S~vADl~N~g~~~~~GsitAA 432 (482)
T 3ij3_A 357 FSTLTGAARIALGPNLPALFANQD----SLAQALIDASLKTDDPLWRLPLFQPYRNYLKSEVADLTNSSQNRMAGAITAA 432 (482)
T ss_dssp EEECCSGGGCTTCTTSCEEEESSH----HHHHHHHHHHHHHTCCCEECCCCGGGGGGGCCSSSSEESSCSSSSCHHHHHH
T ss_pred ecchhhhHHHHhCCCceEEEeCCH----HHHHHHHHHHHHHCCceeeCCCCHHHHHhcCCCeeeeeCCCCCCCcchhHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999998 5899999999
Q ss_pred HHHHhccCC-CCeEEEeeccCccc--CCCCCCchhh
Q psy3774 415 CFLENFTKK-YVWAHLDIAGVAWK--SGDKKGATVE 447 (963)
Q Consensus 415 ~FL~~Fv~~-~~w~HlDiAG~a~~--~~~~~g~~~~ 447 (963)
+||++||++ .||+||||||.... ...|+|+|+.
T Consensus 433 ~FL~~Fv~~~~~WaHlDIAg~~~~~~~~~p~GatG~ 468 (482)
T 3ij3_A 433 LFLQHFVSDQIPWAHFDIFAWNLEDLPGRPIGGEAM 468 (482)
T ss_dssp HHHHTTSCTTSCEEEEEECCEESSCBTTBCSEECCC
T ss_pred HHHHHHcCCCCCeEEEEcccccCCCCCCCCCCchhH
Confidence 999999986 69999999974422 2357777754
No 18
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=100.00 E-value=4.2e-116 Score=997.21 Aligned_cols=412 Identities=25% Similarity=0.374 Sum_probs=342.0
Q ss_pred ccCCCCccEEEEEEcCCCCCcCC----HHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcc
Q psy3774 523 NIQKINAKRILLVNLGDKKKKIK----ESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLY 598 (963)
Q Consensus 523 ~~~~~~~~~vllvGLG~~~~~~~----~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y 598 (963)
..++.+..++.+.=|..+.+..+ ++.+.+....+...... +...+.+.+.. .+ +-+.+-.+..+.+
T Consensus 94 ~~g~~~~~~v~v~~lP~~~SRhN~p~r~~~i~~~v~~~~~~~~~-~~~~~~v~~~~-----~~----~~a~a~AVARa~p 163 (522)
T 4efd_A 94 NAAGSKFVRVVVGEVPTKASRNNCPARPDVVTALVTAALDEVKE-PNTTVDVFVLS-----NA----VLPIAAAVARCGK 163 (522)
T ss_dssp BTTCCSEEEEEEEEECCCCCTTSCTTCHHHHHHHHHHHGGGCCC-SSCEEEEEECC-----CC----HHHHHHHHHHSSS
T ss_pred ccCCCCceEEEEEecCCccccCCCCCChHHHHHHHHhhccccCC-CceEEEEEEec-----cc----HHHHHHHHHhhcc
Confidence 33444677777777777333332 44444444333322211 22333222221 11 2233334444545
Q ss_pred c-CCCccCCCCCC---ccCceEEEEEecCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCC
Q psy3774 599 R-SDAQKSKKKPI---KINIKKIIFALDEKNYIDGKNAIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYK 674 (963)
Q Consensus 599 ~-f~~yk~~~~~~---~~~l~~l~l~~~~~~~~~~~~~~~~~~~ia~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g 674 (963)
+ |.. |+.+... +.....+.++...... . ..++.+++++++++||||+|+|||+|||++||++++++++++|
T Consensus 164 ~~ys~-k~~~~~~~~~~~~~~~~~v~~~~~~~-~---~~~~~~~ia~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g 238 (522)
T 4efd_A 164 HNFSA-KDGAAAAAYNSGKVSRLQVVFPEPPA-I---PPKDLEAVATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALG 238 (522)
T ss_dssp CSBCC-GGGGGGGTTBCSCCCEEEEEESSCCS-S---CHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred cccCc-ccCccccccccCCCCceEEEecCCch-H---hHHHHHHHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 3 553 3322211 1223345555532211 1 2356789999999999999999999999999999999999999
Q ss_pred CeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhh
Q psy3774 675 MDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAA 754 (963)
Q Consensus 675 ~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAA 754 (963)
++|+|+++++|+++|||+||+|||||.+|||||+|+|+|.++.+++|+|||||||||||||||||+.+|++||+||+|||
T Consensus 239 v~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGITFDSGGlsLKp~~~M~~MK~DMgGAA 318 (522)
T 4efd_A 239 FDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGIVYDCGGLALKPADYMKLMKHDMGGAA 318 (522)
T ss_dssp CEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEEETCCCCSSSCHHHHHHHGGGTTHHHH
T ss_pred CEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCceEeecCCccCCCccchhhcccccchHH
Confidence 99999999999999999999999999999999999999987777999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhh---cCCcEEE
Q psy3774 755 SILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVER---FKPSVVI 831 (963)
Q Consensus 755 aVlga~~aia~l~l~vnV~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~---~~p~~iI 831 (963)
+|+|+|++++++++|+||+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++ |+|+.||
T Consensus 319 aVlga~~a~a~l~lpvnV~~vl~~~ENm~sg~A~rPgDVits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~~~~P~~iI 398 (522)
T 4efd_A 319 AVFCGFLTAVRLQQPVQLSCTLCLAENAIGPKSYRNDDIIVMKSGKTVEVINTDAEGRIVLGDGVFHATNELSFTPDVVI 398 (522)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEEEEEECCC-CCSTTTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHHHTSSSCCSEEE
T ss_pred HHHHHHHHHHHcCCCceEEEEEEEeccCCCCCCCCCCCEEEecCCcEEEeccCCchhhhhHHHHHHHhhhccccCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964 6999999
Q ss_pred EecchhHHHHHhhCCCceEEeeCCccchHHHHHHHHHHHhHcCCcEeeCCCChhhH-hhcCCCcccccCCCC-C-Ccchh
Q psy3774 832 DIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAGKMSGDTAWNMPIEDRYQ-KQLKSNFADISNIGN-S-SADSI 908 (963)
Q Consensus 832 DiATLTGA~~vALG~~~ag~~sn~~~~~~~l~~~l~~ag~~~gE~~W~lPl~~~y~-~~lkS~vADl~N~g~-~-~~Gai 908 (963)
|+|||||||++|||++++|+|+||| +|+++|++||+.+||++||||||++|+ ++|||++|||+|+|+ | .||+|
T Consensus 399 DiATLTGA~~vALG~~~agvfsndd----~l~~~l~~Ag~~~gE~~WrlPl~~~y~~~~l~S~vADl~N~g~~~~~aGsi 474 (522)
T 4efd_A 399 DMATLTGAQGIATGRHHAGLYVNEE----GAEAAMLRAGRESGETCFPVLYCPEYHEPEFKSNHADMTNLMERRDNAGVS 474 (522)
T ss_dssp EEECCCTHHHHHHCSSCEEEEESCH----HHHHHHHHHHHHHSCCEEECCCCHHHHGGGGCCSSSSEESSCSSSSSCHHH
T ss_pred eeccchhhHHhhcCCCceEEeeCCH----HHHHHHHHHHHhhCCCCcccCCCHHHHHhhcCCCeeeeeCCCCCCCCccHH
Confidence 9999999999999999999999999 999999999999999999999999985 689999999999975 3 58999
Q ss_pred HHHHHHHhccCC---CCeEEEeeccCCccCCCCCCCCcchHHHHHHHHHhh
Q psy3774 909 TAACFLENFTKK---YVWAHLDIAGVAWKSGDKKGATGRPVTLLTYYLMLK 956 (963)
Q Consensus 909 tAA~FL~~Fv~~---~pWaHLDIAG~a~~~~~~kGaTG~gvr~L~~~l~~~ 956 (963)
|||+||++|+++ .||+|||||||+|. ++|+||||||+|++||+++
T Consensus 475 tAA~FL~~Fv~~~~~~~WaHlDIAG~a~~---~~GaTG~gVr~L~~~l~~~ 522 (522)
T 4efd_A 475 CAGYFITTHLSPKFTGAHIHVDLAYPVFN---SNGATGFGPALLTEYFRKL 522 (522)
T ss_dssp HHHHHHHTTSCTTCCSEEEEEECTTTTEE---TTEECCCSHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCCCeEEEECCCCCcC---CCCceeHHHHHHHHHHHhC
Confidence 999999999973 69999999999996 5899999999999999874
No 19
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=100.00 E-value=2.7e-111 Score=962.04 Aligned_cols=425 Identities=25% Similarity=0.328 Sum_probs=355.7
Q ss_pred cCCCEEEEEEecC---CCcCcccccCC--cHHH---HHHHHHcCCCCCCCCCEEEEcccCCCcccEEEEEeccCcc----
Q psy3774 3 LKTDCLVVGIFKK---NKLSSIVKDID--KYGE---ITNILKSGDLNEKLGSTLLLRNIQKINAKRILLVNLGASN---- 70 (963)
Q Consensus 3 ~~ad~lVvgV~e~---~~l~~~~~~ld--~~g~---l~~~l~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlGk~~---- 70 (963)
+..++||||+|+. ..+++..+.+| ..+. +.++++..+.++ +...++.. ..|.+ ||++.
T Consensus 16 ~~~~vlVlG~~~~~~~~~~t~~~~k~~~r~~gk~~ll~~~l~~~~~~~---~~~~f~~~-----~~Vav--Lg~~~~~~n 85 (491)
T 2hc9_A 16 GLTSLIIVGKKSVLKNVTFEGKFKEVAQKFVTDGDSWNSMISRIPASG---RHPLHYEL-----AHLIT--VPDASSRGN 85 (491)
T ss_dssp SCEEEEEEEEHHHHHHCCSCHHHHHHHTTTSCCHHHHHHHHHHSCSSE---EEESSSSS-----EEEEE--ECSCCCTTS
T ss_pred ccCcEEEEEeeccccCCCccHHHHHhhHhhccchHHHHHHHHhhCCCC---ceeEEecc-----cEEEE--ECCcccCCC
Confidence 4568999999986 45777777777 5564 888999877776 55555532 44554 66653
Q ss_pred -----------cccccC-c--ccccccchhHHHHHHHHHHHh--ccccccccccCCCCcccCccEEEEEecCCChhhHHH
Q psy3774 71 -----------LLLMLP-F--NKIEKYNLSCLIIRTIIIISD--NLYRSDAQKSKKKPIKINIKKIIFALDEKNYIDGKN 134 (963)
Q Consensus 71 -----------~~~~l~-~--~~~~~~d~~~~~~~~~eg~~l--~~Y~f~~~ks~~~~~~~~~~~l~l~~~~~~~~~~~~ 134 (963)
+...+. . ............+++++|+.+ ..|.|++ |++++ ++...++.++.+.. .++
T Consensus 86 ~~~~~~~~~e~vr~a~~~g~~~~~~~v~v~~~~e~~a~~~a~~~~~~~f~~-k~~~~--~~~~~~~~~~~~~~----~~~ 158 (491)
T 2hc9_A 86 TPTNAHSIYKELKPINYPEDTKNVHFVLFAEYPDVLSHVAAIARTFCKFSM-KTSGI--RELNVNIDVVCDKL----TNE 158 (491)
T ss_dssp CTTCHHHHHHHHTTCCCCTTCCEEEEEEECCGGGHHHHHHHHHTTSCCCCC-CSSCC--CCCEEEEEEECTTC----CHH
T ss_pred CHHHHHHHHHHHHHHhcccCcCCceEEEEcCchhHHHHHHHHHHhccchhc-ccccC--CCCCceeeeccCcc----cHH
Confidence 111111 0 000000001112344444444 4444553 44432 22345677764321 256
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 135 AIIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 135 ~~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
.++++.++++++++||||+|+|||+|||+.||++++++++++|++|+|++++||+++|||+||+|||||++|||||+|+|
T Consensus 159 ~~~~~~~~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y 238 (491)
T 2hc9_A 159 DAVFLTDLSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSH 238 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEe
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCC
Q psy3774 215 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPG 294 (963)
Q Consensus 215 ~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pg 294 (963)
+|.++ +++|+|||||||||||||||||+.+|.+||+||||||+|+|+|++++++++|+||++++|+|||||||+|||||
T Consensus 239 ~~~~~-~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~l~~~ENm~sg~A~rPg 317 (491)
T 2hc9_A 239 EVPGS-TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHGFSQTLHACLCIVENNVSPIANKPD 317 (491)
T ss_dssp CCTTC-SCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTTCCSEEEEEEEEEEECCSTTSCCTT
T ss_pred CCCCC-CCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcCCCceEEEEEEeeecCCCCCCCCCC
Confidence 99754 57999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCceEEEeecCCcccceeehhhhhhhhh-cCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHHH
Q psy3774 295 DIVVSMSGKTIEVLDTDAEGRLILCDALTYVER-FKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRAG 373 (963)
Q Consensus 295 DVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~-~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a~ 373 (963)
||||+||||||||.||||||||||||+|+||++ ++|+.|||+|||||||++|||++++|+|+||| +|+++|++||
T Consensus 318 DVits~~GkTVEV~NTDAEGRLvLADaL~yA~~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d----~l~~~l~~Ag 393 (491)
T 2hc9_A 318 DIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATTIFDMATLTGAQAWLSGRLHGAAMTNDE----QLENEIIKAG 393 (491)
T ss_dssp CEEECTTSCEEECSCTTCCHHHHHHHHHHHHHHTTCCSEEEEEECCCTTHHHHHTTTSEEEEESCH----HHHHHHHHHH
T ss_pred CEEEeCCCcEEEEecCCccceeeehhHHHHHhhhcCCCEEEEecchHHHHHHHhCCCcEEEEECcH----HHHHHHHHHH
Confidence 999999999999999999999999999999975 89999999999999999999999999999999 9999999999
Q ss_pred hHcCCceeecCCchh-hHhhcCCCccccccC--CCC-CccchHHHHHHHhccC---CCCeEEEeeccCcccCCCCCCchh
Q psy3774 374 KMSGDTAWNMPIEDR-YQKQLKSNFADISNI--GNS-SADSITAACFLENFTK---KYVWAHLDIAGVAWKSGDKKGATV 446 (963)
Q Consensus 374 ~~~ge~~W~lPl~~~-y~~~l~s~~ADl~N~--~~~-~~g~~~AA~FL~~Fv~---~~~w~HlDiAG~a~~~~~~~g~~~ 446 (963)
+.+||++||||||++ |+++++|++|||+|+ ++| .+|+||||+||++|++ +.||+|||||||+|.++.++|.++
T Consensus 394 ~~~ge~~WrlPl~~~~~~~~l~S~~ADl~N~~~~~~~~~gs~tAa~FL~~fv~~~~~~~W~HlDIAG~a~~~~gaTG~gv 473 (491)
T 2hc9_A 394 KASGDLVAPMLFAPDLFFGDLKSSIADMKNSNLGKMDGPPSAVAGLLIGAHIGFGEGLRWLHLDIAAPAEVGDRGTGYGP 473 (491)
T ss_dssp HHHSCCEEECCCCHHHHGGGGCCSSSSEESCCSSCCSSCHHHHHHHHHHTTTGGGTTSEEEEEECTTTTEETTEECCCSH
T ss_pred HHhCCcEecCCCChHHHHHhcCCchhhhcCCCCCCCCCCcHHHHHHHHHhhCCCCCCCCeEEEecCcccCCCCCceehhH
Confidence 999999999999975 689999999999999 345 4799999999999985 689999999999998777777766
Q ss_pred hhh
Q psy3774 447 ELY 449 (963)
Q Consensus 447 ~l~ 449 (963)
.+.
T Consensus 474 r~L 476 (491)
T 2hc9_A 474 ALF 476 (491)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 20
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=100.00 E-value=1.3e-107 Score=927.67 Aligned_cols=311 Identities=30% Similarity=0.463 Sum_probs=294.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 136 IIYGCAISKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 215 (963)
Q Consensus 136 ~~~~~~ia~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~ 215 (963)
.++.+++++++++||||+|+|||+|||++|+++++++++++|++|+|++++||+++|||+||+|||||.+|||||+|+|+
T Consensus 197 ~~~~~~ia~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~ 276 (522)
T 4efd_A 197 PKDLEAVATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYT 276 (522)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEEC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcCCCcEEEEEEEeeecCCCCCCCCCCc
Q psy3774 216 NGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMNLELNIIGVIVASENMLSGNSTKPGD 295 (963)
Q Consensus 216 ~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN~~~~~a~~pgD 295 (963)
|.++.+++|+|||||||||||||||||+.+|.+||+||+|||+|+|+|++++++++|+||+++||+|||||||+||||||
T Consensus 277 g~~~~~~~iaLVGKGITFDSGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~lpvnV~~vl~~~ENm~sg~A~rPgD 356 (522)
T 4efd_A 277 PKGTPVKKVSLVGKGIVYDCGGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQQPVQLSCTLCLAENAIGPKSYRNDD 356 (522)
T ss_dssp CSSCCSEEEEEEEEEEETCCCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHTCSEEEEEEEEEEECCC-CCSTTTTE
T ss_pred CCCCCCCcEEEecCceEeecCCccCCCccchhhcccccchHHHHHHHHHHHHHcCCCceEEEEEEEeccCCCCCCCCCCC
Confidence 98766789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCceEEEeecCCcccceeehhhhhhhhh---cCCcEEEEeccchhhhhhhcCCCceEEeeCChhchHHHHHHHHHH
Q psy3774 296 IVVSMSGKTIEVLDTDAEGRLILCDALTYVER---FKPSVVIDIATLTGACVVALGHHNSGLFSRNDEKHTKLVLDLLRA 372 (963)
Q Consensus 296 Vi~~~~G~tvEi~NTDAEGRLvLADal~ya~~---~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~~l~~a 372 (963)
|||+||||||||.||||||||||||+|+||++ |+|+.|||+|||||||++|||++++|+|+||| +|+++|++|
T Consensus 357 Vits~~GkTVEV~NTDAEGRLVLADaL~yA~~~~~~~P~~iIDiATLTGA~~vALG~~~agvfsndd----~l~~~l~~A 432 (522)
T 4efd_A 357 IIVMKSGKTVEVINTDAEGRIVLGDGVFHATNELSFTPDVVIDMATLTGAQGIATGRHHAGLYVNEE----GAEAAMLRA 432 (522)
T ss_dssp EEECTTSCEEEESCTTCCHHHHHHHHHHHHHHTSSSCCSEEEEEECCCTHHHHHHCSSCEEEEESCH----HHHHHHHHH
T ss_pred EEEecCCcEEEeccCCchhhhhHHHHHHHhhhccccCCCEEEeeccchhhHHhhcCCCceEEeeCCH----HHHHHHHHH
Confidence 99999999999999999999999999999964 79999999999999999999999999999999 999999999
Q ss_pred HhHcCCceeecCCchhhH-hhcCCCccccccCCC-C-CccchHHHHHHHhccCC---CCeEEEeeccCcccCCCCCCchh
Q psy3774 373 GKMSGDTAWNMPIEDRYQ-KQLKSNFADISNIGN-S-SADSITAACFLENFTKK---YVWAHLDIAGVAWKSGDKKGATV 446 (963)
Q Consensus 373 ~~~~ge~~W~lPl~~~y~-~~l~s~~ADl~N~~~-~-~~g~~~AA~FL~~Fv~~---~~w~HlDiAG~a~~~~~~~g~~~ 446 (963)
|+.+||++||||||++|+ ++++|++|||+|+++ + .||+||||+||++|+++ .||+|||||||+|.+...+|.++
T Consensus 433 g~~~gE~~WrlPl~~~y~~~~l~S~vADl~N~g~~~~~aGsitAA~FL~~Fv~~~~~~~WaHlDIAG~a~~~~GaTG~gV 512 (522)
T 4efd_A 433 GRESGETCFPVLYCPEYHEPEFKSNHADMTNLMERRDNAGVSCAGYFITTHLSPKFTGAHIHVDLAYPVFNSNGATGFGP 512 (522)
T ss_dssp HHHHSCCEEECCCCHHHHGGGGCCSSSSEESSCSSSSSCHHHHHHHHHHTTSCTTCCSEEEEEECTTTTEETTEECCCSH
T ss_pred HHhhCCCCcccCCCHHHHHhhcCCCeeeeeCCCCCCCCccHHHHHHHHHHhcCCCCCCCeEEEECCCCCcCCCCceeHHH
Confidence 999999999999999885 689999999999975 3 57999999999999973 69999999999998766666666
Q ss_pred hhhh
Q psy3774 447 ELYL 450 (963)
Q Consensus 447 ~l~l 450 (963)
.+.+
T Consensus 513 r~L~ 516 (522)
T 4efd_A 513 ALLT 516 (522)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 21
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=91.16 E-value=1.3 Score=46.88 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=73.9
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEccCCCC--
Q psy3774 143 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFK-- 220 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~~~~~~-- 220 (963)
.+.+.+.|+|++.|+-.-.....+++.++.++++|++++..... +.+.+++.- |+..|..++.-+|.--+..
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~ 79 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFN-----DTLNLWAKH-GTSEPVIAFAGHTDVVPTGDE 79 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBT-----TBCEEEEEE-CSSSCEEEEEEECCBCCCCCG
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcC-----CceEEEEEe-CCCCCEEEEEeeecccCCCCc
Confidence 45678899999999876666778899999999999999876432 345566653 5543333333344322111
Q ss_pred ----CCcE-------EEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 221 ----EAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 221 ----~~~i-------~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
..|. .+-|.|. .|| +|.|+++.+++++.+.+ ++.+|+.++-..|=
T Consensus 80 ~~w~~~pf~~~~~~g~~~grG~-------------------~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 138 (269)
T 4h2k_A 80 NQWSSPPFSAEIIDGMLYGRGA-------------------ADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEE 138 (269)
T ss_dssp GGCSSCTTSCCEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSS
T ss_pred ccccCCCCCeEEECCEEEeCCc-------------------ccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccc
Confidence 0111 1222221 444 78888999999988764 46777776655553
No 22
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=90.74 E-value=1.5 Score=46.53 Aligned_cols=117 Identities=18% Similarity=0.155 Sum_probs=76.7
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcC---CCC
Q psy3774 640 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMN---GKF 716 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g---~~~ 716 (963)
.+-+.+.|+|++.|+---.....++...+.+++.|++++..... +.+.+++.- |+. .|+++..-+.- ...
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~-~~~i~l~~H~D~vp~~~ 78 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFN-----DTLNLWAKH-GTS-EPVIAFAGHTDVVPTGD 78 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBT-----TBCEEEEEE-CSS-SCEEEEEEECCBCCCCC
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcC-----CceEEEEEe-CCC-CCEEEEEeeecccCCCC
Confidence 45678999999999876666778888899999999999986532 345666653 554 35544444321 111
Q ss_pred ----CCCcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEEeeccC
Q psy3774 717 ----KEAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASENM 782 (963)
Q Consensus 717 ----~~~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~~~ENm 782 (963)
...|. .+-|.|. .|| +|.|+++.+++++.+.+ ++.+|+.+.-..|=.
T Consensus 79 ~~~w~~~pf~~~~~~g~~~grG~-------------------~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 139 (269)
T 4h2k_A 79 ENQWSSPPFSAEIIDGMLYGRGA-------------------ADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEA 139 (269)
T ss_dssp GGGCSSCTTSCCEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSS
T ss_pred cccccCCCCCeEEECCEEEeCCc-------------------ccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEecccc
Confidence 01111 1233332 455 67888899999998774 568888887777753
No 23
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=90.03 E-value=1.4 Score=49.25 Aligned_cols=129 Identities=19% Similarity=0.257 Sum_probs=78.4
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC---CCCCeEEEE-EEcCC--CC
Q psy3774 643 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS---SEPPKLIII-KYMNG--KF 716 (963)
Q Consensus 643 ~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS---~~~Prli~l-~Y~g~--~~ 716 (963)
+.+-|+|++.|+---.-...++..++.++++|+++++.....-...+.+.+++.=+|+ ...|+++.. +|.-= ..
T Consensus 27 ~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~ 106 (396)
T 3rza_A 27 LNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAI 106 (396)
T ss_dssp HHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCS
T ss_pred HHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCC
Confidence 6788999999986555667888888888999999987543221223567888887776 334555444 44311 11
Q ss_pred CCCcEEEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcCC-CcEEEEEEEeecc
Q psy3774 717 KEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNL-ELNIIGVIVASEN 781 (963)
Q Consensus 717 ~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~l-~vnV~~vi~~~EN 781 (963)
.-+|+ ..+-|..|=.| . + .|=.|| +|.|+.+++++++.+.+. +.+|.-+.-..|=
T Consensus 107 ~~~p~-~~~~g~~~g~G-------~-~-~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 163 (396)
T 3rza_A 107 NVKPI-VKDDGYIYSDG-------T-T-ILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEE 163 (396)
T ss_dssp SCCCE-ECTTSEEECCS-------S-S-CCCHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEESCGG
T ss_pred CcceE-EecCCEEECCC-------c-c-ccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccc
Confidence 11121 11112222111 1 0 122476 899999999999988775 4777777766664
No 24
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=89.38 E-value=2.5 Score=47.06 Aligned_cols=121 Identities=18% Similarity=0.177 Sum_probs=76.5
Q ss_pred HHHHHHHHHhccCCCCCCCh---HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCC-eEeeecCCCCCCCeEEEEEEcCCC
Q psy3774 640 SKGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMG-SLLSVTHGSSEPPKLIIIKYMNGK 715 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP---~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg-~~laVg~GS~~~Prli~l~Y~g~~ 715 (963)
-+-+.+.++|++.|+-.-.+ ...++..++.+++.|+++++.+... .+++ .+++.=+|+..|+-++.-+|.-=+
T Consensus 19 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~---~~~~~~v~a~~~g~~~~~i~l~aH~D~vp 95 (393)
T 1cg2_A 19 PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAG---LVVGDNIVGKIKGRGGKNLLLMSHMDTVY 95 (393)
T ss_dssp HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECST---TCCSEEEEEEEECSSCCCEEEEEECCBSC
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCc---CCCCCeEEEEECCCCCceEEEEEecCcCC
Confidence 45678899999999855445 4678888888899999998875321 1244 666664554434444444443211
Q ss_pred C-C---CCcEE-----EeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcCC--CcEEEEEEEeeccC
Q psy3774 716 F-K---EAPIV-----LVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNL--ELNIIGVIVASENM 782 (963)
Q Consensus 716 ~-~---~~~i~-----LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~l--~vnV~~vi~~~ENm 782 (963)
. . ..|.. |.|+|. .|| +|.|+.+++++++.+.+. +.+|.-+.-..|-.
T Consensus 96 ~~~~~~~~Pf~~~~g~l~grG~-------------------~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 155 (393)
T 1cg2_A 96 LKGILAKAPFRVEGDKAYGPGI-------------------ADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEK 155 (393)
T ss_dssp CTTHHHHSCCEEETTEEECTTT-------------------TTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG
T ss_pred CCCccccCCeeeeCCEEEcCCc-------------------ccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEccccc
Confidence 1 0 11332 222332 455 477899999999998874 35888888887764
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=89.15 E-value=2.3 Score=47.25 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=76.0
Q ss_pred HHHHHHHHHhccCCCCCCCH---HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCC-eEeeecCCCCCCCeEEEEEEccCC
Q psy3774 143 SKGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMG-SLLSVTHGSSEPPKLIIIKYMNGK 218 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP---~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~-~~laVg~gS~~~p~li~l~y~~~~ 218 (963)
.+.+.+.++|++.|+-.-.+ ...+++.++.++++|+++++.+... .+++ .+++.=+|+..|+.++.-+|.--+
T Consensus 19 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~---~~~~~~v~a~~~g~~~~~i~l~aH~D~vp 95 (393)
T 1cg2_A 19 PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAG---LVVGDNIVGKIKGRGGKNLLLMSHMDTVY 95 (393)
T ss_dssp HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECST---TCCSEEEEEEEECSSCCCEEEEEECCBSC
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCc---CCCCCeEEEEECCCCCceEEEEEecCcCC
Confidence 35678899999999855555 5678899999999999998765321 1233 566654454434445555554322
Q ss_pred CCC----CcEEEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcCCC--cEEEEEEEeeec
Q psy3774 219 FKE----APIVLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNLE--LNIIGVIVASEN 284 (963)
Q Consensus 219 ~~~----~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~l~--vnv~~~~~~~EN 284 (963)
... .|....+ |..|=-| ..|| +|.|+.+++++++.+.+.+ .+|..+.-..|-
T Consensus 96 ~~~~~~~~Pf~~~~-g~l~grG-------------~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 154 (393)
T 1cg2_A 96 LKGILAKAPFRVEG-DKAYGPG-------------IADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEE 154 (393)
T ss_dssp CTTHHHHSCCEEET-TEEECTT-------------TTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGG
T ss_pred CCCccccCCeeeeC-CEEEcCC-------------cccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccc
Confidence 111 1332111 1111100 1355 5789999999999987743 477777766665
No 26
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=88.80 E-value=3.3 Score=46.51 Aligned_cols=124 Identities=10% Similarity=0.096 Sum_probs=79.1
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCH--HHHH------------hcCCCeEeeecCCCCCCCe
Q psy3774 640 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINR--EQMQ------------RLKMGSLLSVTHGSSEPPK 705 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~--~~l~------------~~gmg~~laVg~GS~~~Pr 705 (963)
-+-+.+-|+|++.|+=--.....++..++.++++|++++.+.. ..++ ..+.+.++++=+|+...|.
T Consensus 26 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~~~~~ 105 (433)
T 3pfo_A 26 NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRS 105 (433)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCCCSCC
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCCCCCE
Confidence 4567899999999987667778899999999999999988642 2221 1345677777665443344
Q ss_pred -EEEEEEcCCCCC------CCcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--C
Q psy3774 706 -LIIIKYMNGKFK------EAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--L 768 (963)
Q Consensus 706 -li~l~Y~g~~~~------~~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l 768 (963)
++.-+|.-=+.. ..|. .+-|.| .+|| +|.|+.+++++++.+.+ +
T Consensus 106 v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G-------------------~~D~k~~~a~~l~a~~~l~~~~~~~ 166 (433)
T 3pfo_A 106 LILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRG-------------------AQDMKGGVSAMIFALDAIRTAGYAP 166 (433)
T ss_dssp EEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTT-------------------TTTTHHHHHHHHHHHHHHHHTTEEE
T ss_pred EEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecc-------------------hhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 444444311100 0111 111222 2566 78899999999999875 4
Q ss_pred CcEEEEEEEeeccC
Q psy3774 769 ELNIIGVIVASENM 782 (963)
Q Consensus 769 ~vnV~~vi~~~ENm 782 (963)
+.+|.-+.-..|=.
T Consensus 167 ~~~v~~~~~~~EE~ 180 (433)
T 3pfo_A 167 DARVHVQTVTEEES 180 (433)
T ss_dssp SSCEEEEEESCTTT
T ss_pred CccEEEEEEecCcc
Confidence 66777776666653
No 27
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=88.29 E-value=1.8 Score=50.09 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=73.4
Q ss_pred HHHHHHHHHhccCCCCCCCh------------HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecC-CCCCCCeE
Q psy3774 640 SKGIELTKNLGNLSANICTP------------TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTH-GSSEPPKL 706 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP------------~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~-GS~~~Prl 706 (963)
-+-+.+.|+|++.|+---.+ ...++...+.+++.|++++.++ +. .++.+ |+. .|.+
T Consensus 34 ~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~-------~~---~~~~~~g~~-~~~i 102 (492)
T 3khx_A 34 DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD-------HI---AGRIEAGKG-NDVL 102 (492)
T ss_dssp HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-------TT---EEEEEEECS-SCEE
T ss_pred HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC-------CE---EEEEEeCCC-CCEE
Confidence 34578899999999865543 3788899999999999998873 22 22322 433 4555
Q ss_pred EEEEEcC---CCC-C-CCcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--CCcE
Q psy3774 707 IIIKYMN---GKF-K-EAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELN 771 (963)
Q Consensus 707 i~l~Y~g---~~~-~-~~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vn 771 (963)
+.+-+.- ..+ . ..|. .|.|.|. .|| +|.|+.+.+++++.+.+ ++.+
T Consensus 103 ~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~-------------------~D~Kg~~a~~l~a~~~l~~~~~~~~~~ 163 (492)
T 3khx_A 103 GILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGT-------------------LDDKGPTIAAYYAIKILEDMNVDWKKR 163 (492)
T ss_dssp EEEEECCCCCCCSCCSSCTTSCEECSSEEESTTT-------------------TTTHHHHHHHHHHHHHHHHTTCCCSSE
T ss_pred EEEEeccCCCCCCCcccCCCceEEECCEEEecCC-------------------ccCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5544432 111 0 0111 1233333 455 78899999999999885 5689
Q ss_pred EEEEEEeeccC
Q psy3774 772 IIGVIVASENM 782 (963)
Q Consensus 772 V~~vi~~~ENm 782 (963)
|+-++-..|=.
T Consensus 164 i~~~~~~~EE~ 174 (492)
T 3khx_A 164 IHMIIGTDEES 174 (492)
T ss_dssp EEEEEECCTTC
T ss_pred EEEEEECCccC
Confidence 99888888753
No 28
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.04 E-value=4.7 Score=44.30 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=77.6
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC-CCCCeEEEEEEcCCCCCCC
Q psy3774 641 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS-SEPPKLIIIKYMNGKFKEA 719 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS-~~~Prli~l~Y~g~~~~~~ 719 (963)
+-+.+.|+|++.|+---.-...++..++.+++.|+++++. .+.+++.=+|+ ...|.++...+.-.-..
T Consensus 12 ~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~---------~~nv~a~~~g~~~~~~~i~l~aH~D~vp~-- 80 (356)
T 3ct9_A 12 EAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK---------GNNVWCLSPMFDLKKPTILLNSHIDTVKP-- 80 (356)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE---------TTEEEEECSSCCTTSCEEEEEEECCBCCC--
T ss_pred HHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE---------eeeEEEEEecCCCCCCeEEEEccccccCC--
Confidence 4578899999999866666778888899999999999875 57788876663 33455555444321100
Q ss_pred cEEEeccCeeeccCCCCCCCC--CC-hhhhc-ccc-hhhhHHHHHHHHHHhcCCCcEEEEEEEeeccC
Q psy3774 720 PIVLVGKGVTFDTGGISIKPS--YS-MDEMK-YDM-CGAASILGTLYAISEMNLELNIIGVIVASENM 782 (963)
Q Consensus 720 ~i~LVGKGiTFDsGGislKp~--~~-M~~MK-~DM-~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm 782 (963)
|-+-+.|- .+|. ++ |+.=- .|| +|.|+.+++++++.+.+++.+|.-+.-..|=.
T Consensus 81 -----~~~w~~~p----~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~v~~~~~~~EE~ 139 (356)
T 3ct9_A 81 -----VNGWRKDP----FTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTSQNYNLIYLASCEEEV 139 (356)
T ss_dssp -----C-----------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSCCSSEEEEEEECCGGG
T ss_pred -----CCCCCCCC----CccEEECCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCEEEEEEeCccc
Confidence 00011110 0000 11 11000 355 58899999999999988889999888888753
No 29
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=88.03 E-value=4.2 Score=44.66 Aligned_cols=129 Identities=12% Similarity=0.079 Sum_probs=79.6
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC--CCCCeEEEEEEccCCCCC-
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS--SEPPKLIIIKYMNGKFKE- 221 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS--~~~p~li~l~y~~~~~~~- 221 (963)
-+.+.|+|++.|+---.-...+++.++.++++|+++++.........+.+.+++.=+|+ ..|+.++.-+|.--+...
T Consensus 8 ~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~ 87 (373)
T 3gb0_A 8 LVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNG 87 (373)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSS
T ss_pred HHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCC
Confidence 45778999999886667788999999999999999987553222233457788876676 234445555554322111
Q ss_pred -CcEEEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcCC-CcEEEEEEEeeec
Q psy3774 222 -APIVLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNL-ELNIIGVIVASEN 284 (963)
Q Consensus 222 -~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~l-~vnv~~~~~~~EN 284 (963)
+|+ +=.|..|=. + .+ .|-.|| +|.|+.+++++++.+.+. +.+|.-+.-..|=
T Consensus 88 ~~p~--~~~g~~~g~-------G-~~-~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 142 (373)
T 3gb0_A 88 IKPS--IKDGYIVSD-------G-TT-ILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGEE 142 (373)
T ss_dssp CCCE--EETTEEECC-------S-SS-CCCHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEESCGG
T ss_pred cCcE--EECCEEECC-------C-cc-ccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeccc
Confidence 121 111222211 1 11 133466 788999999999988764 3666665555553
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=87.40 E-value=1.1 Score=47.54 Aligned_cols=115 Identities=16% Similarity=0.143 Sum_probs=73.2
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcC---CCC--
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMN---GKF-- 716 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g---~~~-- 716 (963)
-+.+.|+|++.|+---.....++..++.+++.|+++++.+.. +.+.+++.- |+. .|+++..-+.- ...
T Consensus 8 ~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~-~~~i~l~~H~D~vp~~~~~ 80 (268)
T 3t68_A 8 VLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFE-----DTTNFWARR-GTQ-SPLFVFAGHTDVVPAGPLS 80 (268)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEET-----TEEC-CEEE-CSS-SCEEEEEEECCBCCCCCGG
T ss_pred HHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecC-----CccEEEEEe-CCC-CCeEEEEccccccCCCCcc
Confidence 467889999999876666778889999999999998865322 234555543 554 45555444432 111
Q ss_pred --CCCcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEEeeccC
Q psy3774 717 --KEAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASENM 782 (963)
Q Consensus 717 --~~~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~~~ENm 782 (963)
...|. -+.|.|. .|| +|.|+++.+++++.+.+ ++.+|+.+.-..|=.
T Consensus 81 ~w~~~pf~~~~~~g~~~g~G~-------------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 139 (268)
T 3t68_A 81 QWHTPPFEPTVIDGFLHGRGA-------------------ADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEG 139 (268)
T ss_dssp GCSSCTTSCEEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTS
T ss_pred cCCCCCCccEEECCEEEecCc-------------------ccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCcc
Confidence 01121 1223322 444 67888899999998764 568888888777764
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=86.78 E-value=6 Score=43.46 Aligned_cols=129 Identities=12% Similarity=0.083 Sum_probs=79.7
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC-CCCCeEEEE-EEcCCCC--C
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS-SEPPKLIII-KYMNGKF--K 717 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS-~~~Prli~l-~Y~g~~~--~ 717 (963)
-+.+.|+|++.|+---.-...++..++.++++|+++++.........+.+.+++.=+|+ ...|+++.. +|.-=+. .
T Consensus 8 ~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~ 87 (373)
T 3gb0_A 8 LVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNG 87 (373)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSS
T ss_pred HHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCC
Confidence 46788999999986666678888899999999999987553222233457788887776 334555444 4432111 1
Q ss_pred CCcEEEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcCC-CcEEEEEEEeecc
Q psy3774 718 EAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNL-ELNIIGVIVASEN 781 (963)
Q Consensus 718 ~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~l-~vnV~~vi~~~EN 781 (963)
-+|+ +=.|..|=. + .+ .|-.|| +|.|+.+++++++.+.+. +.+|.-+.-..|=
T Consensus 88 ~~p~--~~~g~~~g~-------G-~~-~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 142 (373)
T 3gb0_A 88 IKPS--IKDGYIVSD-------G-TT-ILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGEE 142 (373)
T ss_dssp CCCE--EETTEEECC-------S-SS-CCCHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEESCGG
T ss_pred cCcE--EECCEEECC-------C-cc-ccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeccc
Confidence 0121 111222211 1 11 123466 788999999999998775 4777777666663
No 32
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=86.58 E-value=4.4 Score=46.42 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=76.3
Q ss_pred HHHHHHHHhccCCCCCCCh---HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC-CCCCeEEEEEEcCC--
Q psy3774 641 KGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS-SEPPKLIIIKYMNG-- 714 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP---~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS-~~~Prli~l~Y~g~-- 714 (963)
+-+.+-|+|++.|+=--.. ...++..++.+++.|+++++.+. .+.+.+++.=+|+ ...|.++...+.-.
T Consensus 45 ~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~-----~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp 119 (481)
T 2pok_A 45 HYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDES-----YTAPFVMAHFKSSRPDAKTLIFYNHYDTVP 119 (481)
T ss_dssp HHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECS-----SSSCEEEEEECCSSTTCCEEEEEEECCCCC
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecC-----CCCcEEEEEecCCCCCCCeEEEEEeccCcC
Confidence 4578899999998744333 66888888988999999998762 3567787765554 33455555444321
Q ss_pred -CC-C---CCcEE-------EeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhc--CCCcEEEEEEEee
Q psy3774 715 -KF-K---EAPIV-------LVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEM--NLELNIIGVIVAS 779 (963)
Q Consensus 715 -~~-~---~~~i~-------LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l--~l~vnV~~vi~~~ 779 (963)
.. + ..|.. +.|+|. .|| +|.|+.+++++++.+. .++.+|.-+.-..
T Consensus 120 ~~~~~~w~~~pf~~~~~~g~l~grG~-------------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 180 (481)
T 2pok_A 120 ADGDQVWTEDPFTLSVRNGFMYGRGV-------------------DDDKGHITARLSALRKYMQHHDDLPVNISFIMEGA 180 (481)
T ss_dssp SCSSCCCSSCTTSCEEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESC
T ss_pred CCCccccccCCCCceeeCCeEEcccc-------------------ccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 10 0 01110 122221 454 6789999999999987 5678888888777
Q ss_pred cc
Q psy3774 780 EN 781 (963)
Q Consensus 780 EN 781 (963)
|=
T Consensus 181 EE 182 (481)
T 2pok_A 181 EE 182 (481)
T ss_dssp GG
T ss_pred cc
Confidence 64
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=86.04 E-value=4 Score=44.76 Aligned_cols=120 Identities=13% Similarity=0.200 Sum_probs=74.2
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCC-eEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCC-CCCCC
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKM-DIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNG-KFKEA 719 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~-~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~-~~~~~ 719 (963)
-+.+.|+|++.|+---.....++..++.++++|+ .+++.. .+ +.+++.-.|+. .|.++...+.-. +..+
T Consensus 15 ~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~------~~-~~~~a~~~~~~-~~~v~l~~H~D~vp~~~- 85 (369)
T 3tx8_A 15 PIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFR------FN-NNVLARTNRGL-ASRVMLAGHIDTVPIAD- 85 (369)
T ss_dssp HHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEE------ET-TEEEEECCCCC-SCEEEEEEECCBSCCCS-
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEec------cC-CcEEEEecCCC-CCeEEEEcccCccCCCC-
Confidence 3678899999998777778888999999999876 255432 12 46777766653 455544443321 1111
Q ss_pred cEEEeccCeeeccCCCCCCCCCChhhhc-ccc-hhhhHHHHHHHHHHhc-CCCcEEEEEEEeeccCC
Q psy3774 720 PIVLVGKGVTFDTGGISIKPSYSMDEMK-YDM-CGAASILGTLYAISEM-NLELNIIGVIVASENML 783 (963)
Q Consensus 720 ~i~LVGKGiTFDsGGislKp~~~M~~MK-~DM-~GAAaVlga~~aia~l-~l~vnV~~vi~~~ENm~ 783 (963)
+ ..|. ++. +-|+.=- .|| +|.|+.+++++++.+. +++.+|.-+.-..|=.-
T Consensus 86 ~-------~~~~-----~~~-g~~~g~G~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~g 139 (369)
T 3tx8_A 86 N-------LPSR-----VED-GIMYGCGTVDMKSGLAVYLHTFATLATSTELKHDLTLIAYECEEVA 139 (369)
T ss_dssp C-------CSCE-----ECS-SEEESSSTTTTHHHHHHHHHHHHHHTSCTTCCSEEEEEEECCCSSC
T ss_pred C-------CCCe-----EEC-CEEEcCCcccchHHHHHHHHHHHHHHhhcCCCccEEEEEEeccccC
Confidence 1 1111 110 0111111 377 8899999999999875 56789988888777643
No 34
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=85.97 E-value=9.2 Score=42.40 Aligned_cols=62 Identities=16% Similarity=0.306 Sum_probs=45.3
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEE
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 711 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y 711 (963)
-+.+.++|++.|+---....+++..++.++++|+++++ | .+|.+++.-+|+...|+++...+
T Consensus 9 ~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~~~~~~vll~aH 70 (373)
T 1vhe_A 9 TLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTT-D-------RLGSLIAKKTGAENGPKIMIAGH 70 (373)
T ss_dssp HHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEE-C-------TTCCEEEEEESSTTSCEEEEEEE
T ss_pred HHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-c-------CCCcEEEEecCCCCCceEEEEec
Confidence 35678999999886556678999999999999999875 2 35678886566534466655444
No 35
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=85.92 E-value=4.8 Score=45.21 Aligned_cols=129 Identities=9% Similarity=0.032 Sum_probs=78.4
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCH--HHHH------------HhcCCeEeeecCCCCC-CC
Q psy3774 143 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINR--EQMQ------------RLKMGSLLSVTHGSSE-PP 207 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~--~~l~------------~~gm~~~laVg~gS~~-~p 207 (963)
-+.+.+-|+|++.|+=--.-...++++++.++++|++++.... ..++ ..+.+.++++=+|+.. |+
T Consensus 26 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~~~~~ 105 (433)
T 3pfo_A 26 NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRS 105 (433)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCCCSCC
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCCCCCE
Confidence 4567899999999987777788999999999999999987632 2221 1345677777555433 44
Q ss_pred eEEEEEEccCCCC------CCcEEEcccceEEecCCCCCCCCCCcccc-ccch-hhHHHHHHHHHHHHhcCC--CcEEEE
Q psy3774 208 KLIIIKYMNGKFK------EAPIVLVGKGVTFDTGGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEMNL--ELNIIG 277 (963)
Q Consensus 208 ~li~l~y~~~~~~------~~~i~lVGKGiTFDtGG~~lK~~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~l--~vnv~~ 277 (963)
.++.-+|.--+.. ..|.... ++ ...|..= ..|| +|.|+++++++++.+.+. +.+|+-
T Consensus 106 v~l~aH~D~vp~~~~~~w~~~pf~~~------------~~-~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~ 172 (433)
T 3pfo_A 106 LILQGHIDVVPEGPVDLWSDPPYEAK------------VR-DGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHV 172 (433)
T ss_dssp EEEEEECCBCCCCCGGGCSSCTTTCC------------EE-TTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCEEE
T ss_pred EEEEcccCCcCCCCcccCCCCCCCcE------------EE-CCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccEEE
Confidence 4555555432211 0111000 00 0111110 2465 789999999999998764 566666
Q ss_pred EEEeeec
Q psy3774 278 VIVASEN 284 (963)
Q Consensus 278 ~~~~~EN 284 (963)
+.-..|=
T Consensus 173 ~~~~~EE 179 (433)
T 3pfo_A 173 QTVTEEE 179 (433)
T ss_dssp EEESCTT
T ss_pred EEEecCc
Confidence 5555553
No 36
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.86 E-value=7.4 Score=42.68 Aligned_cols=122 Identities=12% Similarity=0.100 Sum_probs=76.4
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC-CCCCeEEEE-EEccCCCCC
Q psy3774 144 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS-SEPPKLIII-KYMNGKFKE 221 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS-~~~p~li~l-~y~~~~~~~ 221 (963)
+-+.+.|+|++.|+=.-.-...+++.++.++++|+++++. .+.+++.=+|+ ...|.++.. +|.--+..+
T Consensus 12 ~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~---------~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~ 82 (356)
T 3ct9_A 12 EAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK---------GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN 82 (356)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE---------TTEEEEECSSCCTTSCEEEEEEECCBCCCC-
T ss_pred HHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE---------eeeEEEEEecCCCCCCeEEEEccccccCCCC
Confidence 4578899999999866677788999999999999999875 56777775663 234544444 443222110
Q ss_pred CcEEEcccceEEecCCCCCCC-CCCcccc-ccch-hhHHHHHHHHHHHHhcCCCcEEEEEEEeeec
Q psy3774 222 APIVLVGKGVTFDTGGISIKP-SYSMDEM-KYDM-CGAASILGTLYAISEMNLELNIIGVIVASEN 284 (963)
Q Consensus 222 ~~i~lVGKGiTFDtGG~~lK~-~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN 284 (963)
+-+.|- +..+- ...|..= ..|| +|.|+.+++++++.+.+++.+|+-+.-..|=
T Consensus 83 --------~w~~~p--~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~v~~~~~~~EE 138 (356)
T 3ct9_A 83 --------GWRKDP--FTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTSQNYNLIYLASCEEE 138 (356)
T ss_dssp ----------------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSCCSSEEEEEEECCGG
T ss_pred --------CCCCCC--CccEEECCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCEEEEEEeCcc
Confidence 111110 00000 0111111 1244 5899999999999988888888887777775
No 37
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=85.78 E-value=2.9 Score=48.32 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=72.0
Q ss_pred HHHHHHHHHhccCCCCCCCH------------HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEE
Q psy3774 143 SKGIELTKNLGNLSANICTP------------TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLI 210 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP------------~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li 210 (963)
.+-+.+.|+|++.|+-.-.+ ...++++++.++++|++++.++ +.-+++-. |+. .|.++
T Consensus 34 ~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~-------~~~~~~~~--g~~-~~~i~ 103 (492)
T 3khx_A 34 DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD-------HIAGRIEA--GKG-NDVLG 103 (492)
T ss_dssp HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-------TTEEEEEE--ECS-SCEEE
T ss_pred HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC-------CEEEEEEe--CCC-CCEEE
Confidence 35678899999999855543 4889999999999999998763 22222222 333 35555
Q ss_pred EE-EEccCCCCC----CcE-------EEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcC--CCcEE
Q psy3774 211 II-KYMNGKFKE----API-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNI 275 (963)
Q Consensus 211 ~l-~y~~~~~~~----~~i-------~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~--l~vnv 275 (963)
.+ +|.--+..+ .|. .|.|+|. .|| +|.|+++.+++++.+.+ ++.+|
T Consensus 104 l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~-------------------~D~Kg~~a~~l~a~~~l~~~~~~~~~~i 164 (492)
T 3khx_A 104 ILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGT-------------------LDDKGPTIAAYYAIKILEDMNVDWKKRI 164 (492)
T ss_dssp EEEECCCCCCCSCCSSCTTSCEECSSEEESTTT-------------------TTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred EEEeccCCCCCCCcccCCCceEEECCEEEecCC-------------------ccCcHHHHHHHHHHHHHHHcCCCCCCCE
Confidence 44 443211110 111 1223331 354 78899999999999875 46788
Q ss_pred EEEEEeeec
Q psy3774 276 IGVIVASEN 284 (963)
Q Consensus 276 ~~~~~~~EN 284 (963)
+-++-..|=
T Consensus 165 ~~~~~~~EE 173 (492)
T 3khx_A 165 HMIIGTDEE 173 (492)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCcc
Confidence 888877775
No 38
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=85.52 E-value=5.5 Score=45.31 Aligned_cols=120 Identities=13% Similarity=-0.003 Sum_probs=70.6
Q ss_pred HHHHHHHHhccCCCCCCCH------------HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEE
Q psy3774 144 KGIELTKNLGNLSANICTP------------TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLII 211 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP------------~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~ 211 (963)
+-+.+-|+|+..|+-.-.+ ...+++.++.++++|++++..+ +.+.+.-. |+..|+.++.
T Consensus 15 ~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~~-------~~~~~~~~--g~~~~~i~l~ 85 (470)
T 1lfw_A 15 AILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFA-------NYAGRVNF--GAGDKRLGII 85 (470)
T ss_dssp HHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-------TTEEEEEE--CCCSSEEEEE
T ss_pred HHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEec-------CeEEEEEe--CCCCCeEEEE
Confidence 4467889999999765544 5778889999999999998753 23333223 3333334444
Q ss_pred EEEccCCCCC----CcEEEcccceEEecCCCCCCCCCCccccc-cch-hhHHHHHHHHHHHHhcC--CCcEEEEEEEeee
Q psy3774 212 IKYMNGKFKE----APIVLVGKGVTFDTGGISIKPSYSMDEMK-YDM-CGAASILGTLYAISEMN--LELNIIGVIVASE 283 (963)
Q Consensus 212 l~y~~~~~~~----~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk-~Dm-~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~E 283 (963)
-+|.--+..+ .|... ++|-+|. |..== .|| +|.|+.+++++++.+.+ ++.+|..++-..|
T Consensus 86 ~H~D~vp~~~~w~~~Pf~~-----~~~~~g~-------l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~E 153 (470)
T 1lfw_A 86 GHMDVVPAGEGWTRDPFKM-----EIDEEGR-------IYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNE 153 (470)
T ss_dssp EECCBCCCCSCCSSCTTSC-----EECTTCE-------EESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCT
T ss_pred EeecccCCCCCccCCCcce-----eEeeCCE-------EECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCc
Confidence 4443221110 11100 0001111 11100 565 89999999999998876 5678888777776
Q ss_pred c
Q psy3774 284 N 284 (963)
Q Consensus 284 N 284 (963)
=
T Consensus 154 E 154 (470)
T 1lfw_A 154 E 154 (470)
T ss_dssp T
T ss_pred c
Confidence 4
No 39
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=84.92 E-value=7.7 Score=44.08 Aligned_cols=116 Identities=14% Similarity=0.062 Sum_probs=70.8
Q ss_pred HHHHHHHHhccCCCCCCCh------------HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEE
Q psy3774 641 KGIELTKNLGNLSANICTP------------TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLII 708 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP------------~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~ 708 (963)
+-+.+-|+|+..|+---.+ ...++..++.+++.|++++..+ +.+.+.-. |+. .|.++.
T Consensus 15 ~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~~-------~~~~~~~~--g~~-~~~i~l 84 (470)
T 1lfw_A 15 AILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFA-------NYAGRVNF--GAG-DKRLGI 84 (470)
T ss_dssp HHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-------TTEEEEEE--CCC-SSEEEE
T ss_pred HHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEec-------CeEEEEEe--CCC-CCeEEE
Confidence 3477899999999765444 4678888889999999998753 23332222 433 354544
Q ss_pred EEEcC---CCC--CCCcEEEeccCeeeccCCCCCCCCCChhhhc----ccc-hhhhHHHHHHHHHHhcC--CCcEEEEEE
Q psy3774 709 IKYMN---GKF--KEAPIVLVGKGVTFDTGGISIKPSYSMDEMK----YDM-CGAASILGTLYAISEMN--LELNIIGVI 776 (963)
Q Consensus 709 l~Y~g---~~~--~~~~i~LVGKGiTFDsGGislKp~~~M~~MK----~DM-~GAAaVlga~~aia~l~--l~vnV~~vi 776 (963)
..+.- ... ...|... ++|-+|. |. .|| +|.|+.+++++++.+.+ ++.+|.-+.
T Consensus 85 ~~H~D~vp~~~~w~~~Pf~~-----~~~~~g~----------l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~ 149 (470)
T 1lfw_A 85 IGHMDVVPAGEGWTRDPFKM-----EIDEEGR----------IYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVL 149 (470)
T ss_dssp EEECCBCCCCSCCSSCTTSC-----EECTTCE----------EESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEE
T ss_pred EEeecccCCCCCccCCCcce-----eEeeCCE----------EECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 44421 111 0011100 0001111 22 677 88999999999998876 568888888
Q ss_pred Eeecc
Q psy3774 777 VASEN 781 (963)
Q Consensus 777 ~~~EN 781 (963)
-..|=
T Consensus 150 ~~~EE 154 (470)
T 1lfw_A 150 GTNEE 154 (470)
T ss_dssp ESCTT
T ss_pred ecCcc
Confidence 87775
No 40
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=84.67 E-value=3.9 Score=41.22 Aligned_cols=126 Identities=6% Similarity=-0.050 Sum_probs=71.4
Q ss_pred HHHHHHhccCCCCCC--CHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCC-CCeEEEEEEc-cCCCCC
Q psy3774 146 IELTKNLGNLSANIC--TPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIKYM-NGKFKE 221 (963)
Q Consensus 146 ~~~aRdL~n~P~N~l--tP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~-~p~li~l~y~-~~~~~~ 221 (963)
+.+-|+|++.|+-.- .-...+++.++.++++|+++++..-. .|.+.+++.-+|+.. .|+++...+. --+..
T Consensus 13 ~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~- 87 (198)
T 1q7l_A 13 VTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVA----PGYVVTVLTWPGTNPTLSSILLNSHTDVVPVF- 87 (198)
T ss_dssp HHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEE----TTEEEEEEEECCSSTTSCEEEEEEECCBCCCC-
T ss_pred HHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcC----CCCeEEEEEEccCCCCCCeEEEEeeecccCCC-
Confidence 567888999887544 23678899999999999998876421 133456655456542 2444444442 21110
Q ss_pred CcEEEcccceEEecCCCCCCC--CCCccc--cccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 222 APIVLVGKGVTFDTGGISIKP--SYSMDE--MKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 222 ~~i~lVGKGiTFDtGG~~lK~--~~~M~~--Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
+.+.++| =++.+- ...+.. ---|++|.|+++.+++++.+.+ ++.+|+.++-..|=
T Consensus 88 ------~~~w~~~--pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 148 (198)
T 1q7l_A 88 ------KEHWSHD--PFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEE 148 (198)
T ss_dssp ------GGGCSSC--TTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGG
T ss_pred ------cccCccC--CCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccc
Confidence 0111111 011000 000110 1234589999999999999875 56777776666653
No 41
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=84.14 E-value=5.2 Score=40.27 Aligned_cols=125 Identities=9% Similarity=0.027 Sum_probs=73.0
Q ss_pred HHHHHHHhccCCCCCCC--hHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCC-CCeEEEEEEcCCCCCC
Q psy3774 642 GIELTKNLGNLSANICT--PTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIKYMNGKFKE 718 (963)
Q Consensus 642 g~~~aRdL~n~P~N~lt--P~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~-~Prli~l~Y~g~~~~~ 718 (963)
.+.+-|+|++.|+---+ -...++..++.++++|+++++.+.. .|-..+++.-+|+.. .|+++...+.-.-...
T Consensus 12 ~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~ 87 (198)
T 1q7l_A 12 SVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVA----PGYVVTVLTWPGTNPTLSSILLNSHTDVVPVF 87 (198)
T ss_dssp HHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEE----TTEEEEEEEECCSSTTSCEEEEEEECCBCCCC
T ss_pred HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcC----CCCeEEEEEEccCCCCCCeEEEEeeecccCCC
Confidence 36678999999875442 3567888888899999999876522 133456665456542 3555555443210000
Q ss_pred CcEEEeccCeeec-------cCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcC--CCcEEEEEEEeecc
Q psy3774 719 APIVLVGKGVTFD-------TGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 781 (963)
Q Consensus 719 ~~i~LVGKGiTFD-------sGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~--l~vnV~~vi~~~EN 781 (963)
+.+.++| .+|. |. +.+-.+| .+|.|+.+.+++++.+.+ ++.+|..++-..|=
T Consensus 88 ------~~~w~~~pf~~~~~~~g~-l~-GrGa~D~---K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 148 (198)
T 1q7l_A 88 ------KEHWSHDPFEAFKDSEGY-IY-ARGAQDM---KCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEE 148 (198)
T ss_dssp ------GGGCSSCTTTCCBCTTSE-EE-CTTTTTT---HHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGG
T ss_pred ------cccCccCCCeeeEccCCE-EE-eCcchhc---hHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccc
Confidence 0011111 1110 00 0111233 378899999999999875 56788888777764
No 42
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=84.00 E-value=6.1 Score=43.86 Aligned_cols=62 Identities=16% Similarity=0.274 Sum_probs=44.7
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
-+.+.++|++.|+-.-+...+++..++.++++|+++++- .++.+++.=+|+...|+++...+
T Consensus 9 ~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d--------~~gnlia~~~g~~~~~~vll~aH 70 (373)
T 1vhe_A 9 TLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD--------RLGSLIAKKTGAENGPKIMIAGH 70 (373)
T ss_dssp HHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC--------TTCCEEEEEESSTTSCEEEEEEE
T ss_pred HHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc--------CCCcEEEEecCCCCCceEEEEec
Confidence 356788999988766667889999999999999998752 35667775456534465555444
No 43
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=83.44 E-value=11 Score=42.83 Aligned_cols=130 Identities=10% Similarity=0.035 Sum_probs=75.4
Q ss_pred HHHHHHHHHhccCCCCCCCh------HHHHHHHHHhhhhCCCeEEEeCHHHH-HhcCC-----CeEeeecCCCCCCCeEE
Q psy3774 640 SKGIELTKNLGNLSANICTP------TYLENISKKLSFDYKMDIEIINREQM-QRLKM-----GSLLSVTHGSSEPPKLI 707 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP------~~la~~a~~l~~~~g~~v~V~d~~~l-~~~gm-----g~~laVg~GS~~~Prli 707 (963)
-+-+.+-|+|++.|+---.+ ...++..++.+++.|+++++..-..- ...|. +.+++.=.|....|.++
T Consensus 20 ~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~i~ 99 (479)
T 2zog_A 20 DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVC 99 (479)
T ss_dssp HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCTTSCEEE
T ss_pred HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCCCCCeEE
Confidence 34678899999999855554 46788888888999999987642100 00133 56666544433334444
Q ss_pred EEEEcCCCCCCCcEEEeccCeeeccCCCCCCCC-----CC-hhhhc-ccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEE
Q psy3774 708 IIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPS-----YS-MDEMK-YDM-CGAASILGTLYAISEMN--LELNIIGVIV 777 (963)
Q Consensus 708 ~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~-----~~-M~~MK-~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~ 777 (963)
...+.-.-. +|- -++.+-.|- ++ |+.== .|| +|.|+.+++++++.+.+ +|.+|..+.-
T Consensus 100 l~aH~D~vp-------~~~-----~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~ 167 (479)
T 2zog_A 100 IYGHLDVQP-------AAL-----EDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLE 167 (479)
T ss_dssp EEEECCBCC-------CCG-----GGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEE
T ss_pred EEEecCCCC-------CCc-----cccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEe
Confidence 443321100 000 001111111 11 11100 677 89999999999999875 6678888877
Q ss_pred eecc
Q psy3774 778 ASEN 781 (963)
Q Consensus 778 ~~EN 781 (963)
..|=
T Consensus 168 ~~EE 171 (479)
T 2zog_A 168 GMEE 171 (479)
T ss_dssp SCGG
T ss_pred cccc
Confidence 7664
No 44
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=83.13 E-value=3.5 Score=45.93 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=78.2
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC---CC-CCeEEEEEEccCCCC
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS---SE-PPKLIIIKYMNGKFK 220 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS---~~-~p~li~l~y~~~~~~ 220 (963)
-+.+-|+|++.|+--..-...+++.++.++++|+++++.........+.+.+++.=+|+ .. |+.++.-+|.--+..
T Consensus 26 ~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g 105 (396)
T 3rza_A 26 LLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPA 105 (396)
T ss_dssp HHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSC
T ss_pred HHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCC
Confidence 35778999999886666678889999999999999987543221223467788876775 33 444455555432211
Q ss_pred C--CcEEEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcCCC-cEEEEEEEeeec
Q psy3774 221 E--APIVLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNLE-LNIIGVIVASEN 284 (963)
Q Consensus 221 ~--~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~l~-vnv~~~~~~~EN 284 (963)
. +|+ ..+-|..|=.| .+ .|-.|| +|.|+.+++++++.+.+.+ -+|..+.-..|=
T Consensus 106 ~~~~p~-~~~~g~~~g~G-~~--------~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 163 (396)
T 3rza_A 106 INVKPI-VKDDGYIYSDG-TT--------ILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEE 163 (396)
T ss_dssp SSCCCE-ECTTSEEECCS-SS--------CCCHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEESCGG
T ss_pred CCcceE-EecCCEEECCC-cc--------ccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccc
Confidence 1 121 11112222211 10 122466 8999999999999887653 677666655553
No 45
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=82.68 E-value=5.3 Score=43.63 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=74.3
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCC---CC--
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNG---KF-- 716 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~---~~-- 716 (963)
-+.+.|+|++.|+---.-...++..++..+++|++++....+ +.+.+++.- |+. .|+++...+.-. .+
T Consensus 5 ~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~-----~~~n~~a~~-g~~-~~~i~l~aH~D~vp~~~~~ 77 (377)
T 3isz_A 5 VVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFN-----DTLNLWAKH-GTS-EPVIAFAGHTDVVPTGDEN 77 (377)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBT-----TBCEEEEEE-ESS-SCEEEEEEECCBCCCCCGG
T ss_pred HHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecC-----CCceEEEEe-CCC-CCEEEEeccccccCCCCcc
Confidence 467899999999765555667888888889999999976432 467787764 543 455555444321 10
Q ss_pred --CCCc----E---EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEEeeccCC
Q psy3774 717 --KEAP----I---VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASENML 783 (963)
Q Consensus 717 --~~~~----i---~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~~~ENm~ 783 (963)
...| + .+-|.|. .|| +|.++.+.+++++.+.+ ++.+|.-+.-..|-..
T Consensus 78 ~w~~~pf~~~~~~g~~~g~G~-------------------~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~ 137 (377)
T 3isz_A 78 QWSSPPFSAEIIDGMLYGRGA-------------------ADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEAT 137 (377)
T ss_dssp GCSSCTTSCCEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSC
T ss_pred cCCCCCCCcEEECCEEEeCCh-------------------hhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccC
Confidence 0011 1 1222222 366 56788888888887654 5688888887777643
No 46
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=82.28 E-value=6.5 Score=44.17 Aligned_cols=119 Identities=8% Similarity=0.077 Sum_probs=76.9
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCC-CCCCC
Q psy3774 641 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNG-KFKEA 719 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~-~~~~~ 719 (963)
+-+.+.|+|+..|+---.-...++..++.++++|++|++.+ +.+.+++.=+|+.. |.++...+.-. +..+.
T Consensus 29 ~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-------~~~~l~a~~~~~~~-~~i~l~aH~D~vp~~~~ 100 (418)
T 1xmb_A 29 WMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPV-------AITGVIGYIGTGEP-PFVALRADMDALPIQEG 100 (418)
T ss_dssp HHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEE-------TTTEEEEEEESSSS-CEEEEEEECCCBSCCCC
T ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEecc-------CCcEEEEEEcCCCC-CEEEEEecccccCCCCC
Confidence 45889999999997555566788888898999999998753 25677776555433 55555544321 10000
Q ss_pred cEEEeccCeeecc--CCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcC--CCcEEEEEEEeecc
Q psy3774 720 PIVLVGKGVTFDT--GGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 781 (963)
Q Consensus 720 ~i~LVGKGiTFDs--GGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~--l~vnV~~vi~~~EN 781 (963)
.+.-|.+ +|. +- +.+ | | +|.|+.+++++++.+.+ ++.+|.-+.-..|=
T Consensus 101 ------~~~pf~~~~~g~-~~-g~G---~--d-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 152 (418)
T 1xmb_A 101 ------VEWEHKSKIAGK-MH-ACG---H--D-GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE 152 (418)
T ss_dssp ------CCSTTCCSSTTC-BC-CSS---H--H-HHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT
T ss_pred ------CCCCcccCCCCc-eE-eCC---c--h-HHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 1112321 121 00 112 3 3 79999999999999876 67899888877775
No 47
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=82.15 E-value=6.4 Score=43.67 Aligned_cols=116 Identities=15% Similarity=0.114 Sum_probs=72.8
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCC-CCCC--
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNG-KFKE-- 718 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~-~~~~-- 718 (963)
-+.+-|+|++.|+=--.-...++..++.++++|+++++...+ +.+.+++.= |+. .|.++...+.-. +...
T Consensus 8 ~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~-~~~i~l~~H~D~Vp~~~~~ 80 (393)
T 1vgy_A 8 SLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFG-----NTKNIWLRR-GTK-APVVCFAGHTDVVPTGPVE 80 (393)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBT-----TBCEEEEEE-CSS-SSEEEEEEECCBCCCCCGG
T ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecC-----CCcEEEEEE-CCC-CCEEEEEcccCCcCCCCcc
Confidence 367889999999744444557788888889999999986531 356777763 543 355554444321 1100
Q ss_pred ----CcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEEeeccCC
Q psy3774 719 ----API-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASENML 783 (963)
Q Consensus 719 ----~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~~~ENm~ 783 (963)
.|. .|-|+|. .|| +|.|+.+.+++++.+.+ ++.+|.-+.-..|=..
T Consensus 81 ~w~~~Pf~~~~~~g~l~grG~-------------------~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~ 140 (393)
T 1vgy_A 81 KWDSPPFEPAERDGRLYGRGA-------------------ADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGD 140 (393)
T ss_dssp GSSSCTTSCEEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSC
T ss_pred cCCCCCCceEEECCEEEecCc-------------------ccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccC
Confidence 011 1112211 377 56788889998887654 6789988888887654
No 48
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=81.91 E-value=8.5 Score=42.22 Aligned_cols=63 Identities=13% Similarity=0.246 Sum_probs=45.8
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 144 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
+.+.+-++|++.|+-.-....++++.++.++++|+++++. ..+.+++.-+|+...|+++...+
T Consensus 7 ~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d--------~~gnl~a~~~g~~~~~~ill~~H 69 (349)
T 2gre_A 7 ETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN--------NKGALILTVKGKNDAQHRLLTAH 69 (349)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC--------SSSCEEEEECCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe--------cCCcEEEEecCCCCCceEEEEec
Confidence 3456789999999876777889999999999999998874 24567776566533355554443
No 49
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=81.68 E-value=12 Score=41.92 Aligned_cols=132 Identities=16% Similarity=0.158 Sum_probs=74.4
Q ss_pred HHHHHHhccCCCCCC----------ChHHHHHHHHHhhhhCCCe-EEEeCHHHHHhcCCCeEeeecCCCC--CCCeEEEE
Q psy3774 643 IELTKNLGNLSANIC----------TPTYLENISKKLSFDYKMD-IEIINREQMQRLKMGSLLSVTHGSS--EPPKLIII 709 (963)
Q Consensus 643 ~~~aRdL~n~P~N~l----------tP~~la~~a~~l~~~~g~~-v~V~d~~~l~~~gmg~~laVg~GS~--~~Prli~l 709 (963)
+.+-++|++.|+--- .-...++..++.++++|++ +++-+ .+.+++.=+|+. ..|.++..
T Consensus 5 ~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~--------~~nvia~~~g~~~~~~~~i~l~ 76 (417)
T 1fno_A 5 LERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSE--------KGTLMATLPANVEGDIPAIGFI 76 (417)
T ss_dssp HHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECT--------TCCEEEEECCSSCSCCCCEEEE
T ss_pred HHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECC--------CceEEEEECCCCCCCCCceEEE
Confidence 456788999886332 1245677788888889998 76632 567888766653 23555544
Q ss_pred EEcCC---C-CC-CCcEEE---eccCeeeccCCCCCCCCCC-----------hhhh-----cccc-hhhhHHHHHHHHHH
Q psy3774 710 KYMNG---K-FK-EAPIVL---VGKGVTFDTGGISIKPSYS-----------MDEM-----KYDM-CGAASILGTLYAIS 764 (963)
Q Consensus 710 ~Y~g~---~-~~-~~~i~L---VGKGiTFDsGGislKp~~~-----------M~~M-----K~DM-~GAAaVlga~~aia 764 (963)
.+.-. . .. ..|... =|+.|.+=-|.+-++|..- |..= =.|| +|.|+.+++++++.
T Consensus 77 aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~ 156 (417)
T 1fno_A 77 SHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLK 156 (417)
T ss_dssp EECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHH
Confidence 44321 1 11 123332 1221211111111111110 1100 1676 78999999999999
Q ss_pred hcC-CCcEEEEEEEeeccC
Q psy3774 765 EMN-LELNIIGVIVASENM 782 (963)
Q Consensus 765 ~l~-l~vnV~~vi~~~ENm 782 (963)
+.+ ++.+|..+.-..|=.
T Consensus 157 ~~~~~~~~v~~~~~~~EE~ 175 (417)
T 1fno_A 157 GNPIPHGDIKVAFTPDEEV 175 (417)
T ss_dssp SSSCCCCCEEEEEESCGGG
T ss_pred hCCCCCCcEEEEEEecccc
Confidence 876 567888888777753
No 50
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=81.68 E-value=4.7 Score=44.06 Aligned_cols=114 Identities=18% Similarity=0.150 Sum_probs=71.6
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEE-EEccCCCCC--
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIII-KYMNGKFKE-- 221 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l-~y~~~~~~~-- 221 (963)
-+.+.|+|++.|+-.-.-...+++.++.++++|++++....+ +.+.+++.- |+. .|+++.. +|.--+..+
T Consensus 5 ~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~-----~~~n~~a~~-g~~-~~~i~l~aH~D~vp~~~~~ 77 (377)
T 3isz_A 5 VVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFN-----DTLNLWAKH-GTS-EPVIAFAGHTDVVPTGDEN 77 (377)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBT-----TBCEEEEEE-ESS-SCEEEEEEECCBCCCCCGG
T ss_pred HHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecC-----CCceEEEEe-CCC-CCEEEEeccccccCCCCcc
Confidence 467889999999765556678888889999999999975422 467777763 543 4555444 443211100
Q ss_pred ----Cc----E---EEcccceEEecCCCCCCCCCCccccccch-hhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 222 ----AP----I---VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 222 ----~~----i---~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
.| + .+-|.| ..|| +|.|+.+.+++++.+.+ ++.+|+.+.-..|-
T Consensus 78 ~w~~~pf~~~~~~g~~~g~G-------------------~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 135 (377)
T 3isz_A 78 QWSSPPFSAEIIDGMLYGRG-------------------AADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEE 135 (377)
T ss_dssp GCSSCTTSCCEETTEEESTT-------------------TTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSS
T ss_pred cCCCCCCCcEEECCEEEeCC-------------------hhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccc
Confidence 01 1 122222 1265 67788888888877654 46778777766665
No 51
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=81.29 E-value=5.6 Score=44.12 Aligned_cols=126 Identities=10% Similarity=-0.018 Sum_probs=70.7
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEccCCCCCCcE
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPI 224 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~~~~~~~~~i 224 (963)
-+.+-|+|++.|+=.-.-...+++.++.++++|+++++...+ +.+.+++.= |+..|+.++.-+|.--+..+.
T Consensus 8 ~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~~~~i~l~~H~D~Vp~~~~-- 79 (393)
T 1vgy_A 8 SLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFG-----NTKNIWLRR-GTKAPVVCFAGHTDVVPTGPV-- 79 (393)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBT-----TBCEEEEEE-CSSSSEEEEEEECCBCCCCCG--
T ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecC-----CCcEEEEEE-CCCCCEEEEEcccCCcCCCCc--
Confidence 356788999998744444567888888889999999886421 356677763 543333344444432221110
Q ss_pred EEcccceEEecCCCC--CCCCCCcccc-ccch-hhHHHHHHHHHHHHhcC--CCcEEEEEEEeeecC
Q psy3774 225 VLVGKGVTFDTGGIS--IKPSYSMDEM-KYDM-CGAASILGTLYAISEMN--LELNIIGVIVASENM 285 (963)
Q Consensus 225 ~lVGKGiTFDtGG~~--lK~~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN~ 285 (963)
.+.+.|- ++ ++ ...|..= ..|| +|.|+++.+++++.+.+ ++.+|+.+.-..|=.
T Consensus 80 ----~~w~~~P--f~~~~~-~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 139 (393)
T 1vgy_A 80 ----EKWDSPP--FEPAER-DGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEG 139 (393)
T ss_dssp ----GGSSSCT--TSCEEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSS
T ss_pred ----ccCCCCC--CceEEE-CCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEecccc
Confidence 0000000 00 00 0011110 1366 66788888888887653 567888777777653
No 52
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=81.04 E-value=13 Score=42.32 Aligned_cols=129 Identities=9% Similarity=-0.003 Sum_probs=75.5
Q ss_pred HHHHHHHHHhccCCCCCCCH------HHHHHHHHHhhhcCCCeEEEeCHHHH-HHhcC-----CeEeeecCCCCCCCeEE
Q psy3774 143 SKGIELTKNLGNLSANICTP------TYLENISKKLSFDYKMDIEIINREQM-QRLKM-----GSLLSVTHGSSEPPKLI 210 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP------~~~a~~a~~l~~~~gv~v~v~~~~~l-~~~gm-----~~~laVg~gS~~~p~li 210 (963)
.+-+.+-|+|++.|+-...+ ...+++.++.++++|+++++..-..- ...|. +.+++.=.|....|.++
T Consensus 20 ~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~i~ 99 (479)
T 2zog_A 20 DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVC 99 (479)
T ss_dssp HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCTTSCEEE
T ss_pred HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCCCCCeEE
Confidence 34578899999999865555 57889999999999999987642100 01133 56666533333334443
Q ss_pred -EEEEccCCCCCCcEEEcccceEEecCCCCCCCC-----CC-ccccc-cch-hhHHHHHHHHHHHHhcC--CCcEEEEEE
Q psy3774 211 -IIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPS-----YS-MDEMK-YDM-CGAASILGTLYAISEMN--LELNIIGVI 279 (963)
Q Consensus 211 -~l~y~~~~~~~~~i~lVGKGiTFDtGG~~lK~~-----~~-M~~Mk-~Dm-~GaAaV~g~~~a~a~l~--l~vnv~~~~ 279 (963)
.-+|.--+... -++.+-.|- .+ |..== .|| +|.|+.+++++++.+.+ ++.+|..++
T Consensus 100 l~aH~D~vp~~~-------------~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 100 IYGHLDVQPAAL-------------EDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEEECCBCCCCG-------------GGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEEecCCCCCCc-------------cccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 33443211100 001111111 11 11110 566 89999999999999875 567888777
Q ss_pred Eeeec
Q psy3774 280 VASEN 284 (963)
Q Consensus 280 ~~~EN 284 (963)
-..|=
T Consensus 167 ~~~EE 171 (479)
T 2zog_A 167 EGMEE 171 (479)
T ss_dssp ESCGG
T ss_pred ecccc
Confidence 76665
No 53
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=80.85 E-value=8.2 Score=44.13 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=75.5
Q ss_pred HHHHHHHHhccCCCCCCCH---HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC-CCCCeEEEEE-EccCC
Q psy3774 144 KGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS-SEPPKLIIIK-YMNGK 218 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP---~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS-~~~p~li~l~-y~~~~ 218 (963)
+.+.+-|+|++.|+=.-.. ...+++.++.+++.|+++++.+. .+.+.+++.=+|+ ...|.++... |.--+
T Consensus 45 ~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~-----~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp 119 (481)
T 2pok_A 45 HYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDES-----YTAPFVMAHFKSSRPDAKTLIFYNHYDTVP 119 (481)
T ss_dssp HHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECS-----SSSCEEEEEECCSSTTCCEEEEEEECCCCC
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecC-----CCCcEEEEEecCCCCCCCeEEEEEeccCcC
Confidence 4578899999998744333 77899999999999999998752 3567777765554 3334444443 33211
Q ss_pred CCC------CcE-------EEcccceEEecCCCCCCCCCCccccccc-hhhHHHHHHHHHHHHhc--CCCcEEEEEEEee
Q psy3774 219 FKE------API-------VLVGKGVTFDTGGISIKPSYSMDEMKYD-MCGAASILGTLYAISEM--NLELNIIGVIVAS 282 (963)
Q Consensus 219 ~~~------~~i-------~lVGKGiTFDtGG~~lK~~~~M~~Mk~D-m~GaAaV~g~~~a~a~l--~l~vnv~~~~~~~ 282 (963)
... .|. .+.|+|. .| ++|.|+.+.+++++.+. .++.+|..+.-..
T Consensus 120 ~~~~~~w~~~pf~~~~~~g~l~grG~-------------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 180 (481)
T 2pok_A 120 ADGDQVWTEDPFTLSVRNGFMYGRGV-------------------DDDKGHITARLSALRKYMQHHDDLPVNISFIMEGA 180 (481)
T ss_dssp SCSSCCCSSCTTSCEEETTEEESTTT-------------------TTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESC
T ss_pred CCCccccccCCCCceeeCCeEEcccc-------------------ccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 110 011 0112220 34 57889999999999987 5678888877777
Q ss_pred ec
Q psy3774 283 EN 284 (963)
Q Consensus 283 EN 284 (963)
|=
T Consensus 181 EE 182 (481)
T 2pok_A 181 EE 182 (481)
T ss_dssp GG
T ss_pred cc
Confidence 65
No 54
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=80.42 E-value=9.7 Score=41.75 Aligned_cols=62 Identities=13% Similarity=0.244 Sum_probs=45.9
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEE
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 711 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y 711 (963)
.+.+-++|++.|+---....+++..++.++++|+++++. ..+.+++.-+|+...|+++...+
T Consensus 8 ~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d--------~~gnl~a~~~g~~~~~~ill~~H 69 (349)
T 2gre_A 8 TMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN--------NKGALILTVKGKNDAQHRLLTAH 69 (349)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC--------SSSCEEEEECCSEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe--------cCCcEEEEecCCCCCceEEEEec
Confidence 467789999999866677889999999999999998874 35568887667633455554444
No 55
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=79.20 E-value=6.8 Score=42.92 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=73.3
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCC-eEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEccCCCCCCc
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKM-DIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAP 223 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv-~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~~~~~~~~~ 223 (963)
-+.+.|+|++.|+=.-.....++++++.++++|+ .+++.. .+ +.+++.-+|+..|+.++.-+|.--+..+ +
T Consensus 15 ~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~------~~-~~~~a~~~~~~~~~v~l~~H~D~vp~~~-~ 86 (369)
T 3tx8_A 15 PIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFR------FN-NNVLARTNRGLASRVMLAGHIDTVPIAD-N 86 (369)
T ss_dssp HHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEE------ET-TEEEEECCCCCSCEEEEEEECCBSCCCS-C
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEec------cC-CcEEEEecCCCCCeEEEEcccCccCCCC-C
Confidence 3578899999998777778899999999999876 255432 12 4677765555434444444443322211 1
Q ss_pred EEEcccceEEecCCCCCCCCCCcccc-ccch-hhHHHHHHHHHHHHhc-CCCcEEEEEEEeeec
Q psy3774 224 IVLVGKGVTFDTGGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEM-NLELNIIGVIVASEN 284 (963)
Q Consensus 224 i~lVGKGiTFDtGG~~lK~~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l-~l~vnv~~~~~~~EN 284 (963)
..| .++ ...|..= ..|| +|.|+.+++++++.+. +++.+|+.+.-..|=
T Consensus 87 -------~~~-----~~~-~g~~~g~G~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 137 (369)
T 3tx8_A 87 -------LPS-----RVE-DGIMYGCGTVDMKSGLAVYLHTFATLATSTELKHDLTLIAYECEE 137 (369)
T ss_dssp -------CSC-----EEC-SSEEESSSTTTTHHHHHHHHHHHHHHTSCTTCCSEEEEEEECCCS
T ss_pred -------CCC-----eEE-CCEEEcCCcccchHHHHHHHHHHHHHHhhcCCCccEEEEEEeccc
Confidence 111 111 1112221 1376 8999999999999765 457788777766665
No 56
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=78.88 E-value=16 Score=40.73 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=73.6
Q ss_pred HHHHHHhccCCCCCC----------CHHHHHHHHHHhhhcCCCe-EEEeCHHHHHHhcCCeEeeecCCCC---CCCeEEE
Q psy3774 146 IELTKNLGNLSANIC----------TPTYLENISKKLSFDYKMD-IEIINREQMQRLKMGSLLSVTHGSS---EPPKLII 211 (963)
Q Consensus 146 ~~~aRdL~n~P~N~l----------tP~~~a~~a~~l~~~~gv~-v~v~~~~~l~~~gm~~~laVg~gS~---~~p~li~ 211 (963)
+.+-++|++.|+-.- .-...+++.++.++++|++ +++-. .+.+++.=+|+. .|+.++.
T Consensus 5 ~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~--------~~nvia~~~g~~~~~~~~i~l~ 76 (417)
T 1fno_A 5 LERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSE--------KGTLMATLPANVEGDIPAIGFI 76 (417)
T ss_dssp HHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECT--------TCCEEEEECCSSCSCCCCEEEE
T ss_pred HHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECC--------CceEEEEECCCCCCCCCceEEE
Confidence 456788888876332 2246788888888999998 76532 467777755553 3444444
Q ss_pred EEEccCCCCC----CcEEE---cccceEEecCCCCCCCCC-----------Ccccc-----ccch-hhHHHHHHHHHHHH
Q psy3774 212 IKYMNGKFKE----APIVL---VGKGVTFDTGGISIKPSY-----------SMDEM-----KYDM-CGAASILGTLYAIS 267 (963)
Q Consensus 212 l~y~~~~~~~----~~i~l---VGKGiTFDtGG~~lK~~~-----------~M~~M-----k~Dm-~GaAaV~g~~~a~a 267 (963)
-++.--+... +|... =|+.|.+=-|.+-++|.. -|..= -.|| +|.|+.+.+++.+.
T Consensus 77 aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~ 156 (417)
T 1fno_A 77 SHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLK 156 (417)
T ss_dssp EECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHH
Confidence 4443322111 23322 122221111111111110 11111 1566 88999999999999
Q ss_pred hcC-CCcEEEEEEEeeec
Q psy3774 268 EMN-LELNIIGVIVASEN 284 (963)
Q Consensus 268 ~l~-l~vnv~~~~~~~EN 284 (963)
+.+ ++.+|..+.-..|=
T Consensus 157 ~~~~~~~~v~~~~~~~EE 174 (417)
T 1fno_A 157 GNPIPHGDIKVAFTPDEE 174 (417)
T ss_dssp SSSCCCCCEEEEEESCGG
T ss_pred hCCCCCCcEEEEEEeccc
Confidence 876 45788877777765
No 57
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=78.54 E-value=19 Score=40.49 Aligned_cols=137 Identities=12% Similarity=0.154 Sum_probs=79.1
Q ss_pred HHHHHHHHhccCCCCCCC----------hHHHHHHHHHhhhhCCCe-EEEeCHHHHHhcCCCeEeeecCCCC--CCCeEE
Q psy3774 641 KGIELTKNLGNLSANICT----------PTYLENISKKLSFDYKMD-IEIINREQMQRLKMGSLLSVTHGSS--EPPKLI 707 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~lt----------P~~la~~a~~l~~~~g~~-v~V~d~~~l~~~gmg~~laVg~GS~--~~Prli 707 (963)
+-+.+.++|++.|+-.-. -..+++...+.+++.|++ |++ |+ .+.+++.=.|+. ..|.++
T Consensus 28 ~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d~-------~~nv~a~~~g~~~~~~~~v~ 99 (434)
T 3ife_A 28 ELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-DD-------NGYVMATLPANTDKDVPVIG 99 (434)
T ss_dssp HHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CT-------TSCEEEEECCBSSSCCCCEE
T ss_pred HHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-CC-------CcEEEEEeCCCCCCCCCeEE
Confidence 446788899998863321 157888888888999997 877 32 455777655553 235555
Q ss_pred EEEEcCC-C----CCCCcEEEe---ccCeeeccC-CCCCCCCCC--hhhhc--------------ccc-hhhhHHHHHHH
Q psy3774 708 IIKYMNG-K----FKEAPIVLV---GKGVTFDTG-GISIKPSYS--MDEMK--------------YDM-CGAASILGTLY 761 (963)
Q Consensus 708 ~l~Y~g~-~----~~~~~i~LV---GKGiTFDsG-GislKp~~~--M~~MK--------------~DM-~GAAaVlga~~ 761 (963)
...+.-. + ...+|...- |+-|.++.+ |.-+.|... ...+. .|| +|.|+.+++++
T Consensus 100 l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~ 179 (434)
T 3ife_A 100 FLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMN 179 (434)
T ss_dssp EEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHH
Confidence 5444321 1 112343322 333433322 122333311 11111 455 78899999999
Q ss_pred HHHhcC--CCcEEEEEEEeeccCCCC
Q psy3774 762 AISEMN--LELNIIGVIVASENMLSG 785 (963)
Q Consensus 762 aia~l~--l~vnV~~vi~~~ENm~~g 785 (963)
++.+.+ ++.+|.-+.-..|=.-+|
T Consensus 180 ~L~~~~~~~~~~i~~if~~~EE~g~G 205 (434)
T 3ife_A 180 YLIHNPQIKHGKIRVAFTPDEEIGRG 205 (434)
T ss_dssp HHHTCTTSCBCCEEEEEESCGGGTCT
T ss_pred HHHhCCCCCCCCEEEEEECCcccChH
Confidence 999875 567888777777643344
No 58
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=77.52 E-value=8.4 Score=43.25 Aligned_cols=120 Identities=8% Similarity=0.003 Sum_probs=75.8
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEE-EEccCCCCC
Q psy3774 143 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIII-KYMNGKFKE 221 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l-~y~~~~~~~ 221 (963)
.+-+.+.|+|+..|+=-..-...+++.++.++++|++++... +.+.+++.=+|+.. |.++.. +|.--+..+
T Consensus 28 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-------~~~~l~a~~~~~~~-~~i~l~aH~D~vp~~~ 99 (418)
T 1xmb_A 28 DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPV-------AITGVIGYIGTGEP-PFVALRADMDALPIQE 99 (418)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEE-------TTTEEEEEEESSSS-CEEEEEEECCCBSCCC
T ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEecc-------CCcEEEEEEcCCCC-CEEEEEecccccCCCC
Confidence 356788999999997666667888999999999999988753 24567776455433 555444 443211110
Q ss_pred CcEEEcccceEEecCCCCCCCCCCc--cccccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 222 APIVLVGKGVTFDTGGISIKPSYSM--DEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 222 ~~i~lVGKGiTFDtGG~~lK~~~~M--~~Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
. .+.-|.+ .+ ...| .+| | +|.|+.+++++++.+.+ ++.+|..+.-..|=
T Consensus 100 ~------~~~pf~~----~~-~g~~~g~G~--d-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 152 (418)
T 1xmb_A 100 G------VEWEHKS----KI-AGKMHACGH--D-GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE 152 (418)
T ss_dssp C------CCSTTCC----SS-TTCBCCSSH--H-HHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT
T ss_pred C------CCCCccc----CC-CCceEeCCc--h-HHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 0 1111221 01 1111 224 3 79999999999999876 56788877766665
No 59
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=77.28 E-value=12 Score=41.84 Aligned_cols=121 Identities=12% Similarity=0.163 Sum_probs=75.4
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCC---CC-
Q psy3774 641 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNG---KF- 716 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~---~~- 716 (963)
+-+.+.|+|+..|+---.-...++..++.+++.|+++++.+. |-..+++.=+|+...|.++...+.-. .+
T Consensus 33 ~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~------~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~ 106 (404)
T 1ysj_A 33 RLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQ------LKTGVIAEIKGREDGPVIAIRADIDALPIQEQ 106 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTT------CSSCEEEEEECSSCCCEEEEEEECCCBSCCCC
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEecc------CCceEEEEEeCCCCCCEEEEEEecccccCCCC
Confidence 347889999999986666678889999999999998865431 23367776556533355544443221 11
Q ss_pred CCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhc--CCCcEEEEEEEeeccC
Q psy3774 717 KEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEM--NLELNIIGVIVASENM 782 (963)
Q Consensus 717 ~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l--~l~vnV~~vi~~~ENm 782 (963)
...|.... -+|. + ....|| +|.|+.+++++++.+. +++.+|.-+.-..|=.
T Consensus 107 ~~~Pf~~~-------~~g~-l----~g~G~k---g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 159 (404)
T 1ysj_A 107 TNLPFASK-------VDGT-M----HACGHD---FHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEI 159 (404)
T ss_dssp CCCTTCCS-------STTC-B----CTTSHH---HHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTT
T ss_pred CCCCcccC-------CCCc-e----EcCcCh---HHHHHHHHHHHHHHhccccCCceEEEEEeccccc
Confidence 11221111 0121 0 011232 8999999999999986 4678888887766653
No 60
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=77.04 E-value=23 Score=40.45 Aligned_cols=129 Identities=11% Similarity=0.059 Sum_probs=73.0
Q ss_pred HHHHHHHHHhccCCCC--CCCh------HHHHHHHHHhhhhCCCeEEEeCHHH--HHhcC-----CCeEeeecCCCCCCC
Q psy3774 640 SKGIELTKNLGNLSAN--ICTP------TYLENISKKLSFDYKMDIEIINREQ--MQRLK-----MGSLLSVTHGSSEPP 704 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N--~ltP------~~la~~a~~l~~~~g~~v~V~d~~~--l~~~g-----mg~~laVg~GS~~~P 704 (963)
-+-+.+-|+|++.|+= --.| ...++..++.+++.|+++++.+... +. .| -..+++.=.|....|
T Consensus 25 ~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~-~g~~~~~~~~v~a~~~~~~~~~ 103 (485)
T 3dlj_A 25 DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLP-DGQSLPIPPVILAELGSDPTKG 103 (485)
T ss_dssp HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC---CCEEECCCEEEEEECCCTTSC
T ss_pred HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCccccc-CCCccCCCcEEEEEECCCCCCC
Confidence 4567899999999986 6665 3677788888889999998875210 00 12 123444433322233
Q ss_pred eEEEE-EEcC--CCC----CCCcEEEeccCeeeccCCCCCCCCCChhhh-cccc-hhhhHHHHHHHHHHhcC--CCcEEE
Q psy3774 705 KLIII-KYMN--GKF----KEAPIVLVGKGVTFDTGGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEMN--LELNII 773 (963)
Q Consensus 705 rli~l-~Y~g--~~~----~~~~i~LVGKGiTFDsGGislKp~~~M~~M-K~DM-~GAAaVlga~~aia~l~--l~vnV~ 773 (963)
.++.. +|.- ..+ ...|...+ . .+|. |+.= ..|| +|.|+.+++++++.+.+ ++.+|.
T Consensus 104 ~i~l~aH~D~vp~~~~~~w~~~Pf~~~-----~-~~g~-------l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 170 (485)
T 3dlj_A 104 TVCFYGHLDVQPADRGDGWLTDPYVLT-----E-VDGK-------LYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIK 170 (485)
T ss_dssp EEEEEEECCBCCCCGGGTCSSCTTSCE-----E-ETTE-------EESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred EEEEEeeecCCCCCCcccCCCCCCccE-----E-ECCE-------EEecccccCcHHHHHHHHHHHHHHHhCCCCCccEE
Confidence 33333 2221 100 00111000 0 0110 1110 1466 78899999999999875 578999
Q ss_pred EEEEeeccC
Q psy3774 774 GVIVASENM 782 (963)
Q Consensus 774 ~vi~~~ENm 782 (963)
-+.-..|=.
T Consensus 171 ~~~~~~EE~ 179 (485)
T 3dlj_A 171 FIIEGMEEA 179 (485)
T ss_dssp EEEESCGGG
T ss_pred EEEEccccc
Confidence 888888764
No 61
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=75.37 E-value=20 Score=39.99 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=73.7
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEE-EEEEccCCCC--
Q psy3774 144 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLI-IIKYMNGKFK-- 220 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li-~l~y~~~~~~-- 220 (963)
+-+.+.|+|+..|+-.-.-...+++.++.++++|+++++.+. |-..+++.=+|+...|.++ .-+|.--+..
T Consensus 33 ~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~------~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~ 106 (404)
T 1ysj_A 33 RLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQ------LKTGVIAEIKGREDGPVIAIRADIDALPIQEQ 106 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTT------CSSCEEEEEECSSCCCEEEEEEECCCBSCCCC
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEecc------CCceEEEEEeCCCCCCEEEEEEecccccCCCC
Confidence 457889999999986667788999999999999998865431 2235666655553334444 4444322211
Q ss_pred -CCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhc--CCCcEEEEEEEeeec
Q psy3774 221 -EAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEM--NLELNIIGVIVASEN 284 (963)
Q Consensus 221 -~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l--~l~vnv~~~~~~~EN 284 (963)
..|... + -+| .|.. +...+|.|+++++++++.+. +++.+|+-+.-..|=
T Consensus 107 ~~~Pf~~--~-----~~g-------~l~g-~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 158 (404)
T 1ysj_A 107 TNLPFAS--K-----VDG-------TMHA-CGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEE 158 (404)
T ss_dssp CCCTTCC--S-----STT-------CBCT-TSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTT
T ss_pred CCCCccc--C-----CCC-------ceEc-CcChHHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 112111 0 011 1111 21248999999999999986 466777776655554
No 62
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=75.21 E-value=10 Score=43.53 Aligned_cols=129 Identities=10% Similarity=0.023 Sum_probs=74.1
Q ss_pred HHHHHHHHHhccCCCC--CCCH------HHHHHHHHHhhhcCCCeEEEeCHHH--HHHhc-----CCeEeeecCCCCCCC
Q psy3774 143 SKGIELTKNLGNLSAN--ICTP------TYLENISKKLSFDYKMDIEIINREQ--MQRLK-----MGSLLSVTHGSSEPP 207 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N--~ltP------~~~a~~a~~l~~~~gv~v~v~~~~~--l~~~g-----m~~~laVg~gS~~~p 207 (963)
.+-+.+-|+|++.|+= .-+| ...++++++.++++|+++++..... +. .| -+.+++.=.+....|
T Consensus 25 ~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~-~g~~~~~~~~v~a~~~~~~~~~ 103 (485)
T 3dlj_A 25 DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLP-DGQSLPIPPVILAELGSDPTKG 103 (485)
T ss_dssp HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC---CCEEECCCEEEEEECCCTTSC
T ss_pred HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCccccc-CCCccCCCcEEEEEECCCCCCC
Confidence 4567889999999986 6665 4678888899999999998865210 00 12 123444422222223
Q ss_pred e-EEEEEEccCCCC------CCcEEEcccceEEecCCCCCCCCCCcccc-ccch-hhHHHHHHHHHHHHhcC--CCcEEE
Q psy3774 208 K-LIIIKYMNGKFK------EAPIVLVGKGVTFDTGGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEMN--LELNII 276 (963)
Q Consensus 208 ~-li~l~y~~~~~~------~~~i~lVGKGiTFDtGG~~lK~~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~--l~vnv~ 276 (963)
. ++.-+|.--+.. ..|...+ ++ ...|..= ..|| +|.|+.+++++++.+.+ ++.+|.
T Consensus 104 ~i~l~aH~D~vp~~~~~~w~~~Pf~~~------------~~-~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 170 (485)
T 3dlj_A 104 TVCFYGHLDVQPADRGDGWLTDPYVLT------------EV-DGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIK 170 (485)
T ss_dssp EEEEEEECCBCCCCGGGTCSSCTTSCE------------EE-TTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred EEEEEeeecCCCCCCcccCCCCCCccE------------EE-CCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEE
Confidence 3 333344321110 0111000 00 0111111 2365 88999999999999875 568898
Q ss_pred EEEEeeecC
Q psy3774 277 GVIVASENM 285 (963)
Q Consensus 277 ~~~~~~EN~ 285 (963)
-++-..|=.
T Consensus 171 ~~~~~~EE~ 179 (485)
T 3dlj_A 171 FIIEGMEEA 179 (485)
T ss_dssp EEEESCGGG
T ss_pred EEEEccccc
Confidence 888877764
No 63
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=73.99 E-value=5.4 Score=43.57 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=42.5
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 148 LTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 148 ~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
+-++|++.|+-.-+...+++..++.++++|+++++- .++.+++.-+|+...|+++...+
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d--------~~gnlia~~~g~~~~~~v~l~aH 61 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD--------VLGNLIALKRGRDSSKKLLVSAH 61 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC--------TTSCEEEEECCSEEEEEEEEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe--------CCCcEEEEecCCCCCceEEEEec
Confidence 357888888866677889999999999999998872 24667776566533455555444
No 64
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=73.56 E-value=34 Score=38.37 Aligned_cols=133 Identities=11% Similarity=0.109 Sum_probs=77.5
Q ss_pred HHHHHHHHhccCCCCCCC----------HHHHHHHHHHhhhcCCCe-EEEeCHHHHHHhcCCeEeeecCCCC---CCCeE
Q psy3774 144 KGIELTKNLGNLSANICT----------PTYLENISKKLSFDYKMD-IEIINREQMQRLKMGSLLSVTHGSS---EPPKL 209 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~lt----------P~~~a~~a~~l~~~~gv~-v~v~~~~~l~~~gm~~~laVg~gS~---~~p~l 209 (963)
+.+.+-++|+..|+-.-. -..++++..+.++++|++ +++ |+ .+-+++.=+|+. .|+.+
T Consensus 28 ~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d~-------~~nv~a~~~g~~~~~~~~v~ 99 (434)
T 3ife_A 28 ELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-DD-------NGYVMATLPANTDKDVPVIG 99 (434)
T ss_dssp HHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CT-------TSCEEEEECCBSSSCCCCEE
T ss_pred HHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-CC-------CcEEEEEeCCCCCCCCCeEE
Confidence 456778889888753331 268899999999999997 877 31 455667645543 34455
Q ss_pred EEEEEccCCC----CCCcEEEc---ccceEEecCC-CCCCCCCC--ccccc--------------cc-hhhHHHHHHHHH
Q psy3774 210 IIIKYMNGKF----KEAPIVLV---GKGVTFDTGG-ISIKPSYS--MDEMK--------------YD-MCGAASILGTLY 264 (963)
Q Consensus 210 i~l~y~~~~~----~~~~i~lV---GKGiTFDtGG-~~lK~~~~--M~~Mk--------------~D-m~GaAaV~g~~~ 264 (963)
+.-+|.--+. ..+|...- |+-|.++.++ .-+.|... ...+. .| ++|.|+.+++++
T Consensus 100 l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~ 179 (434)
T 3ife_A 100 FLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMN 179 (434)
T ss_dssp EEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHH
Confidence 5555543321 12343322 3334443221 22222210 11111 34 478999999999
Q ss_pred HHHhcC--CCcEEEEEEEeeec
Q psy3774 265 AISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 265 a~a~l~--l~vnv~~~~~~~EN 284 (963)
++.+.+ ++.+|.-+.-..|=
T Consensus 180 ~L~~~~~~~~~~i~~if~~~EE 201 (434)
T 3ife_A 180 YLIHNPQIKHGKIRVAFTPDEE 201 (434)
T ss_dssp HHHTCTTSCBCCEEEEEESCGG
T ss_pred HHHhCCCCCCCCEEEEEECCcc
Confidence 999875 45778777777765
No 65
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=72.89 E-value=7.6 Score=42.38 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=43.1
Q ss_pred HHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEE
Q psy3774 645 LTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 711 (963)
Q Consensus 645 ~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y 711 (963)
+-++|++.|+---....+++..++.++++|+++++ | .+|.+++.-.|+...|+++...+
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~~~~~~v~l~aH 61 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYT-D-------VLGNLIALKRGRDSSKKLLVSAH 61 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEE-C-------TTSCEEEEECCSEEEEEEEEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-e-------CCCcEEEEecCCCCCceEEEEec
Confidence 35788999886667778999999999999999887 2 35678887666544455555444
No 66
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=72.66 E-value=9.9 Score=41.71 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=44.3
Q ss_pred HHHHHHhccCCCCCCCh-HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEE
Q psy3774 643 IELTKNLGNLSANICTP-TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 711 (963)
Q Consensus 643 ~~~aRdL~n~P~N~ltP-~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y 711 (963)
+.+-++|++.|+---.. ..+++..++.++++|+++++ | +++.+++.-.|+ +|+++..-+
T Consensus 9 ~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~--~~~i~l~aH 68 (353)
T 1y0y_A 9 YELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKV-D-------KLGNVIAHKKGE--GPKVMIAAH 68 (353)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEE-C-------TTCCEEEEECCS--SCEEEEEEE
T ss_pred HHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEE-c-------CCCCEEEEecCC--CccEEEEec
Confidence 46788999999865555 67899999999999999876 2 467788876666 466665544
No 67
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=71.95 E-value=15 Score=42.02 Aligned_cols=127 Identities=14% Similarity=-0.005 Sum_probs=72.1
Q ss_pred HHHHHHHHhccCCCCCCC----------HHHHHHHHHHhhhcCCC---eEEEeCHHHHHHhcCCeEeeecCCCCCCCeEE
Q psy3774 144 KGIELTKNLGNLSANICT----------PTYLENISKKLSFDYKM---DIEIINREQMQRLKMGSLLSVTHGSSEPPKLI 210 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~lt----------P~~~a~~a~~l~~~~gv---~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li 210 (963)
+-+.+-|+|++.|+-..+ -...++++.+.++++|+ ++++++.. -+-+.+++.=+|+..++.++
T Consensus 19 ~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~----~~~~~v~a~~~g~~~~~i~l 94 (472)
T 3pfe_A 19 EILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLK----NRTPLLFMEIPGQIDDTVLL 94 (472)
T ss_dssp THHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCT----TSCCEEEEEECCSEEEEEEE
T ss_pred HHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecC----CCCcEEEEEEcCCCCCeEEE
Confidence 457889999999984432 35677788888888887 47776532 12457777656633333344
Q ss_pred EEEEccCCCCCCcEEEcccceEEecCCCCCCC---CCCcccc-ccch-hhHHHHHHHHHHHHhcCCC-cEEEEEEEeeec
Q psy3774 211 IIKYMNGKFKEAPIVLVGKGVTFDTGGISIKP---SYSMDEM-KYDM-CGAASILGTLYAISEMNLE-LNIIGVIVASEN 284 (963)
Q Consensus 211 ~l~y~~~~~~~~~i~lVGKGiTFDtGG~~lK~---~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~l~-vnv~~~~~~~EN 284 (963)
.-+|.--+. +.+-+. +.--.++ ...|..= ..|| +|.|+.+++++++.+.+.+ -||+-++-..|=
T Consensus 95 ~~H~D~vp~--------~~~w~~--~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE 164 (472)
T 3pfe_A 95 YGHLDKQPE--------MSGWSD--DLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCILIIEACEE 164 (472)
T ss_dssp EEECCBCCC--------CSCCCT--TCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCEEEEEEEESCGG
T ss_pred EccccCCCC--------cCCCCc--CCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCC
Confidence 444432111 111110 0000000 1112221 1465 8899999999999987653 277776666655
No 68
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=71.54 E-value=27 Score=39.76 Aligned_cols=126 Identities=13% Similarity=0.007 Sum_probs=71.0
Q ss_pred HHHHHHHHhccCCCCCCC----------hHHHHHHHHHhhhhCCC---eEEEeCHHHHHhcCCCeEeeecCCCCCCCeEE
Q psy3774 641 KGIELTKNLGNLSANICT----------PTYLENISKKLSFDYKM---DIEIINREQMQRLKMGSLLSVTHGSSEPPKLI 707 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~lt----------P~~la~~a~~l~~~~g~---~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli 707 (963)
+-+.+-|+|++.|+--.+ -...++...+..++.|+ ++++++.. .+-+.+++.=+|+. .|.++
T Consensus 19 ~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~----~~~~~v~a~~~g~~-~~~i~ 93 (472)
T 3pfe_A 19 EILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLK----NRTPLLFMEIPGQI-DDTVL 93 (472)
T ss_dssp THHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCT----TSCCEEEEEECCSE-EEEEE
T ss_pred HHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecC----CCCcEEEEEEcCCC-CCeEE
Confidence 457899999999984432 24566777778888887 47776532 12457777766632 34444
Q ss_pred EE-EEcCCCCCCCcEEEeccCeeeccCCCCCCC---CCChhhh-cccc-hhhhHHHHHHHHHHhcCCC-cEEEEEEEeec
Q psy3774 708 II-KYMNGKFKEAPIVLVGKGVTFDTGGISIKP---SYSMDEM-KYDM-CGAASILGTLYAISEMNLE-LNIIGVIVASE 780 (963)
Q Consensus 708 ~l-~Y~g~~~~~~~i~LVGKGiTFDsGGislKp---~~~M~~M-K~DM-~GAAaVlga~~aia~l~l~-vnV~~vi~~~E 780 (963)
.. +|.-=+ + +.+-+. +.--.+| .+-|+.= ..|| +|.|+.+++++++.+.+.+ -||.-++-..|
T Consensus 94 l~~H~D~vp-----~---~~~w~~--~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~E 163 (472)
T 3pfe_A 94 LYGHLDKQP-----E---MSGWSD--DLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCILIIEACE 163 (472)
T ss_dssp EEEECCBCC-----C---CSCCCT--TCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCEEEEEEEESCG
T ss_pred EEccccCCC-----C---cCCCCc--CCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCC
Confidence 33 332100 0 111110 0000000 0011111 1466 8889999999999988753 27887777775
Q ss_pred c
Q psy3774 781 N 781 (963)
Q Consensus 781 N 781 (963)
=
T Consensus 164 E 164 (472)
T 3pfe_A 164 E 164 (472)
T ss_dssp G
T ss_pred C
Confidence 5
No 69
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=71.27 E-value=10 Score=39.92 Aligned_cols=114 Identities=15% Similarity=0.111 Sum_probs=70.0
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEE-EEccCCCCC--
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIII-KYMNGKFKE-- 221 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l-~y~~~~~~~-- 221 (963)
-+.+.|+|++.|+-.-.....+++.++.++++|+++++.... +.+.+++.= |+. .|+++.. +|.--+..+
T Consensus 8 ~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~nv~a~~-g~~-~~~i~l~~H~D~vp~~~~~ 80 (268)
T 3t68_A 8 VLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFE-----DTTNFWARR-GTQ-SPLFVFAGHTDVVPAGPLS 80 (268)
T ss_dssp HHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEET-----TEEC-CEEE-CSS-SCEEEEEEECCBCCCCCGG
T ss_pred HHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecC-----CccEEEEEe-CCC-CCeEEEEccccccCCCCcc
Confidence 457889999999876666778999999999999998865322 234455542 554 4544444 443221110
Q ss_pred ----CcE-------EEcccceEEecCCCCCCCCCCccccccc-hhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 222 ----API-------VLVGKGVTFDTGGISIKPSYSMDEMKYD-MCGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 222 ----~~i-------~lVGKGiTFDtGG~~lK~~~~M~~Mk~D-m~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
.|. -+.|.| -.| ++|.|+++.+++++.+.+ ++.+|+.++-..|=
T Consensus 81 ~w~~~pf~~~~~~g~~~g~G-------------------~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 138 (268)
T 3t68_A 81 QWHTPPFEPTVIDGFLHGRG-------------------AADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEE 138 (268)
T ss_dssp GCSSCTTSCEEETTEEESTT-------------------TTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTT
T ss_pred cCCCCCCccEEECCEEEecC-------------------cccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCc
Confidence 111 122222 134 478888999999988764 45777776655554
No 70
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=70.76 E-value=22 Score=39.58 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=68.5
Q ss_pred HHHHHHhccCCCCC--------CChHH--HHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCC-CCeEEEEEE
Q psy3774 643 IELTKNLGNLSANI--------CTPTY--LENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIKY 711 (963)
Q Consensus 643 ~~~aRdL~n~P~N~--------ltP~~--la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~-~Prli~l~Y 711 (963)
..+-++|++.|+.. +++.+ .++...+.++++|+++++ | .++.+++.=+|+.. .|+++...+
T Consensus 8 ~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnv~a~~~g~~~~~~~i~l~aH 79 (408)
T 3n5f_A 8 WQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE-D-------AAGNLIGRKEGTNPDATVVLVGSH 79 (408)
T ss_dssp HHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEE-C-------TTCCEEEEECCSSTTSCEEEEEEE
T ss_pred HHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEE-c-------CCCCEEEEecCCCCCCCEEEEEec
Confidence 56678899888722 34433 455667777888999887 2 24678887777653 466655555
Q ss_pred cCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcC--CCcEEEEEEEeecc
Q psy3774 712 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 781 (963)
Q Consensus 712 ~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~--l~vnV~~vi~~~EN 781 (963)
.-.- |. || ..+|| +|.|+.+++++.+.+.+ ++.+|.-+.-..|=
T Consensus 80 ~D~v----~~-----------~g--------~~d~~---~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 125 (408)
T 3n5f_A 80 LDSV----YN-----------GG--------CFDGP---LGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEE 125 (408)
T ss_dssp SCCC----TT-----------BC--------SSTTH---HHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSS
T ss_pred CCCC----CC-----------CC--------ccCCH---HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcc
Confidence 4221 10 22 12344 68899999999999876 56777777777764
No 71
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=70.33 E-value=31 Score=37.46 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=45.6
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 643 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 712 (963)
Q Consensus 643 ~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~ 712 (963)
+.+.++|++.|+---.-..+++..++.++++|+++++ | .+|.+++.-.|+ .+|+++...+.
T Consensus 8 ~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~-~~~~i~l~aH~ 68 (346)
T 1vho_A 8 GKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKT-T-------RHGSLIGYKKGK-GIGKLAFFAHV 68 (346)
T ss_dssp HHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEE-C-------TTSCEEEEECCS-SSCEEEEEEEC
T ss_pred HHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEE-e-------cCCcEEEEEcCC-CCceEEEEecC
Confidence 5688999999985555567899999999999999887 2 366788875565 34677666554
No 72
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=68.85 E-value=34 Score=37.10 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=45.2
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 146 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 215 (963)
Q Consensus 146 ~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~ 215 (963)
+.+.++|++.|+-.-.-..+++..++.++++|+++++ | .+|.+++.=.|+ ..|+++...+.
T Consensus 8 ~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~-~~~~i~l~aH~ 68 (346)
T 1vho_A 8 GKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKT-T-------RHGSLIGYKKGK-GIGKLAFFAHV 68 (346)
T ss_dssp HHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEE-C-------TTSCEEEEECCS-SSCEEEEEEEC
T ss_pred HHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEE-e-------cCCcEEEEEcCC-CCceEEEEecC
Confidence 4688999999985555678999999999999999886 2 356677764554 34667666554
No 73
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=65.52 E-value=32 Score=38.22 Aligned_cols=105 Identities=12% Similarity=0.124 Sum_probs=66.5
Q ss_pred HHHHHHhccCCCCC--------CCHH--HHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCC-CCeEEEEEE
Q psy3774 146 IELTKNLGNLSANI--------CTPT--YLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIKY 214 (963)
Q Consensus 146 ~~~aRdL~n~P~N~--------ltP~--~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~-~p~li~l~y 214 (963)
..+-++|++.|+.. +++. ..+++..+.++++|+++++ | .++.+++.=+|+.. .|+++...+
T Consensus 8 ~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~-d-------~~gnv~a~~~g~~~~~~~i~l~aH 79 (408)
T 3n5f_A 8 WQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE-D-------AAGNLIGRKEGTNPDATVVLVGSH 79 (408)
T ss_dssp HHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEE-C-------TTCCEEEEECCSSTTSCEEEEEEE
T ss_pred HHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEE-c-------CCCCEEEEecCCCCCCCEEEEEec
Confidence 45677888888722 2343 4567777888888999887 2 24678887677653 455555544
Q ss_pred ccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 215 MNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 215 ~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
.-.- + + ||. ..| ++|.|+.+++++.+.+.+ ++-+|.-+.-..|=
T Consensus 80 ~D~v----~---~--------~g~--------~d~---~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 125 (408)
T 3n5f_A 80 LDSV----Y---N--------GGC--------FDG---PLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEE 125 (408)
T ss_dssp SCCC----T---T--------BCS--------STT---HHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSS
T ss_pred CCCC----C---C--------CCc--------cCC---HHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcc
Confidence 3211 1 0 121 123 378999999999999876 55677666666664
No 74
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=65.34 E-value=41 Score=38.00 Aligned_cols=134 Identities=9% Similarity=0.039 Sum_probs=72.4
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeC------------------------------HHHHHhc-
Q psy3774 640 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIIN------------------------------REQMQRL- 688 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d------------------------------~~~l~~~- 688 (963)
-+-+.+.|+|...|.--..=..-++...+..+++|++|+... +++++..
T Consensus 14 ~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (445)
T 3io1_A 14 PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFE 93 (445)
T ss_dssp HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGT
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcccccccccccccc
Confidence 356889999999998766666677888888899999988741 1112211
Q ss_pred -CCCeEeeecCCCCCCCeEEE-EEEcCCCCCCCcEEEeccCeeecc--CCC-CCCCCCChhhhcccchhhhHHHHHHHHH
Q psy3774 689 -KMGSLLSVTHGSSEPPKLII-IKYMNGKFKEAPIVLVGKGVTFDT--GGI-SIKPSYSMDEMKYDMCGAASILGTLYAI 763 (963)
Q Consensus 689 -gmg~~laVg~GS~~~Prli~-l~Y~g~~~~~~~i~LVGKGiTFDs--GGi-slKp~~~M~~MK~DM~GAAaVlga~~ai 763 (963)
+-.+++++=+|+...|.++. -++.-=+..+. .+.++|- +++ |.++. -|+.-=.| ++.|+.+++++++
T Consensus 94 ~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~------~~~~~~Pf~~~~~s~~~G-~~h~cGhd-~~~a~~l~aa~~L 165 (445)
T 3io1_A 94 GGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQ------HDDSHRPHRDHFASCNAG-MMHACGHD-GHTAIGLGLAHVL 165 (445)
T ss_dssp TTCCCEEEEEECSSCCCEEEEEEECCCCCC--------------------------------CTTC-THHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCC------CCCCcCccccccccCCCC-ceEecCch-HHHHHHHHHHHHH
Confidence 34667776565543344443 33331110000 0111111 111 12221 12210012 5689999999999
Q ss_pred Hhc--CCCcEEEEEEEeecc
Q psy3774 764 SEM--NLELNIIGVIVASEN 781 (963)
Q Consensus 764 a~l--~l~vnV~~vi~~~EN 781 (963)
.+. +++-+|+-+.-..|=
T Consensus 166 ~~~~~~~~g~v~l~f~p~EE 185 (445)
T 3io1_A 166 KQYAAQLNGVIKLIFQPAEE 185 (445)
T ss_dssp HHTGGGCCSEEEEEEESCTT
T ss_pred HhCcCcCCceEEEEEecccc
Confidence 986 467788777766654
No 75
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=64.27 E-value=14 Score=40.59 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=43.5
Q ss_pred HHHHHHhccCCCCCCCH-HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 146 IELTKNLGNLSANICTP-TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 146 ~~~aRdL~n~P~N~ltP-~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
+.+-++|++.|+-.-+. ..+++..++.++++|.++++ | +++.+++.-+|+ .|+++...+
T Consensus 9 ~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~-d-------~~gnlia~~~g~--~~~i~l~aH 68 (353)
T 1y0y_A 9 YELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKV-D-------KLGNVIAHKKGE--GPKVMIAAH 68 (353)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEE-C-------TTCCEEEEECCS--SCEEEEEEE
T ss_pred HHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEE-c-------CCCCEEEEecCC--CccEEEEec
Confidence 46778899998765566 67899999999999998876 2 456777765665 466665544
No 76
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=64.26 E-value=5.7 Score=43.75 Aligned_cols=118 Identities=11% Similarity=0.034 Sum_probs=64.7
Q ss_pred HHHHHHHHhccCCCCCCCH---HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecC---CCCCCCeEEEE-EEcc
Q psy3774 144 KGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTH---GSSEPPKLIII-KYMN 216 (963)
Q Consensus 144 ~~~~~aRdL~n~P~N~ltP---~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~---gS~~~p~li~l-~y~~ 216 (963)
+-+.+.|+|++.|+-.-+| ...+++.++.++++|+++++.. +.+.+.=. |.. .|.++.. +|.-
T Consensus 7 ~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~---------~~~~~~~~~~~~~~-~~~i~l~aH~D~ 76 (364)
T 2rb7_A 7 HIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD---------HDGIPSVMVLPEKG-RAGLLLMAHIDV 76 (364)
T ss_dssp HHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE---------ETTEEEEEECSBTT-EEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec---------CCCceEEEEEcCCC-CCeEEEECccCc
Confidence 4567899999999755333 4567788888899999888741 22233212 222 3444444 4432
Q ss_pred CCCCCCcEEEcccceEEecCCCCCCCCCCcccc-ccch-hhHHHHHHHHHHHHhcCCCc-----E--EEEEEEeeec
Q psy3774 217 GKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEMNLEL-----N--IIGVIVASEN 284 (963)
Q Consensus 217 ~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~M-k~Dm-~GaAaV~g~~~a~a~l~l~v-----n--v~~~~~~~EN 284 (963)
-+....| |.+ .++ ...|..= ..|| +|.|+.+.+++++.+.+++. + |.-+.-..|=
T Consensus 77 vp~~~~p---------~~~---~~~-~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE 140 (364)
T 2rb7_A 77 VDAEDDL---------FVP---RVE-NDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEE 140 (364)
T ss_dssp CCCCGGG---------GSC---EEE-TTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGG
T ss_pred CCCCCCC---------Ccc---EEE-CCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccc
Confidence 1110011 100 000 0111111 1366 57899999999998866544 6 6666666654
No 77
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=63.55 E-value=22 Score=39.72 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=65.6
Q ss_pred HHHHHHHhccCCCCC--------CCh--HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCC-CCeEEEEE
Q psy3774 642 GIELTKNLGNLSANI--------CTP--TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIK 710 (963)
Q Consensus 642 g~~~aRdL~n~P~N~--------ltP--~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~-~Prli~l~ 710 (963)
.+.+-++|++.|+-. +++ ...++..++.++++|+++++- .++.+++.=+|+.. .|.++...
T Consensus 11 ~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~--------~~gnv~a~~~g~~~~~~~i~l~~ 82 (423)
T 1z2l_A 11 IEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD--------EVGNLYGRLNGTEYPQEVVLSGS 82 (423)
T ss_dssp HHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC--------TTSCEEEEECCSSEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe--------cCCcEEEEEcCCCCCCCEEEEEE
Confidence 456778888877643 112 334677788888899998762 24567776556532 24454444
Q ss_pred EcCCCCCCCcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhcC--CCcEEEEEEEeeccC
Q psy3774 711 YMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASENM 782 (963)
Q Consensus 711 Y~g~~~~~~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l~--l~vnV~~vi~~~ENm 782 (963)
+.-.- |. ||. .+|| +|.|+.+++++++.+.+ ++.+|.-+.-..|=.
T Consensus 83 H~D~V----p~-----------~g~--------~D~k---~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~ 130 (423)
T 1z2l_A 83 HIDTV----VN-----------GGN--------LDGQ---FGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEG 130 (423)
T ss_dssp ECCCC----TT-----------BCS--------STTH---HHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSC
T ss_pred ecCCC----CC-----------CCc--------cCCH---HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccc
Confidence 43211 10 121 2233 57789999999998865 667888877776653
No 78
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=62.42 E-value=3.4 Score=36.22 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=18.2
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| .+|||+|.+.||+.|.
T Consensus 37 ~~~spA~~aGl~~GD~I~~ing~~v~ 62 (95)
T 3r68_A 37 EPGSPAEAAGLKNNDLVVAVNGKSVE 62 (95)
T ss_dssp CTTSHHHHHTCCTTEEEEEETTEECT
T ss_pred CCCCHHHHCCCCCCCEEEEECCEECC
Confidence 344443333 8999999999998874
No 79
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=60.15 E-value=40 Score=36.45 Aligned_cols=60 Identities=22% Similarity=0.271 Sum_probs=44.1
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 644 ELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 712 (963)
Q Consensus 644 ~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~ 712 (963)
.+.++|++.|+---.-..+++..++.++++|+++++ | .+|.+++.-.|+ ..|+++...+.
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~-d-------~~gnlia~~~g~-~~~~vll~aH~ 66 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRF-D-------GLGSVLIRLNES-TGPKVMICAHM 66 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEE-C-------TTCCEEEECCCC-SSCEEEEEEEC
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-e-------cCCCEEEEecCC-CCceEEEEEcC
Confidence 578999999985555567888898989999998875 3 356788876665 34666665554
No 80
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=58.70 E-value=27 Score=37.72 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=42.3
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEE
Q psy3774 146 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 214 (963)
Q Consensus 146 ~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y 214 (963)
+.+-++|++.|+-.-+...+++..++.++++|+ +++ | +++.+++.-.| ..|+++...+
T Consensus 5 ~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d-------~~gnlia~~~~--~~~~i~l~aH 62 (332)
T 2wyr_A 5 IEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-D-------AIGNLIVELGE--GEERILFMAH 62 (332)
T ss_dssp HHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-C-------TTCCEEEEEES--SSEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-c-------CCCeEEEEecC--CCceEEEEec
Confidence 457889999988666778999999999999998 664 2 46777776445 2455555444
No 81
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=58.23 E-value=59 Score=35.10 Aligned_cols=60 Identities=22% Similarity=0.271 Sum_probs=43.9
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 147 ELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 215 (963)
Q Consensus 147 ~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~ 215 (963)
.+-++|++.|+-.-.-..++++.++.++++|+++++ | .+|.+++.-.|+ ..|+++...+.
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~-d-------~~gnlia~~~g~-~~~~vll~aH~ 66 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRF-D-------GLGSVLIRLNES-TGPKVMICAHM 66 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEE-C-------TTCCEEEECCCC-SSCEEEEEEEC
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEE-e-------cCCCEEEEecCC-CCceEEEEEcC
Confidence 578899999986666677899999999999998875 3 256677765565 34666665553
No 82
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=57.42 E-value=59 Score=36.72 Aligned_cols=134 Identities=8% Similarity=0.009 Sum_probs=71.8
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeC------------------------------HHHHHHh-
Q psy3774 143 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIIN------------------------------REQMQRL- 191 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~------------------------------~~~l~~~- 191 (963)
.+-+.+.|+|...|.--..=..-++++.+.++++|++|+... .++++..
T Consensus 14 ~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (445)
T 3io1_A 14 PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFE 93 (445)
T ss_dssp HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGT
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcccccccccccccc
Confidence 356789999999998777777778888898999999988631 1122222
Q ss_pred -cCCeEeeecCCCCCCCe-EEEEEEccCCCCCCcEEEcccceEEec--CCC-CCCCCCCccccccchhhHHHHHHHHHHH
Q psy3774 192 -KMGSLLSVTHGSSEPPK-LIIIKYMNGKFKEAPIVLVGKGVTFDT--GGI-SIKPSYSMDEMKYDMCGAASILGTLYAI 266 (963)
Q Consensus 192 -gm~~~laVg~gS~~~p~-li~l~y~~~~~~~~~i~lVGKGiTFDt--GG~-~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~ 266 (963)
+-.+++++=+|+...|. ++.-++.--+..+. .+.++|- +++ +.++ .-|+.-=.| ++.|+.+++++++
T Consensus 94 ~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~------~~~~~~Pf~~~~~s~~~-G~~h~cGhd-~~~a~~l~aa~~L 165 (445)
T 3io1_A 94 GGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQ------HDDSHRPHRDHFASCNA-GMMHACGHD-GHTAIGLGLAHVL 165 (445)
T ss_dssp TTCCCEEEEEECSSCCCEEEEEEECCCCCC--------------------------------CTTC-THHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCC------CCCCcCccccccccCCC-CceEecCch-HHHHHHHHHHHHH
Confidence 34667776555543344 44444543221100 0111111 111 1111 112211013 6789999999999
Q ss_pred HhcC--CCcEEEEEEEeeec
Q psy3774 267 SEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 267 a~l~--l~vnv~~~~~~~EN 284 (963)
.+.+ ++-+|+-+.--.|=
T Consensus 166 ~~~~~~~~g~v~l~f~p~EE 185 (445)
T 3io1_A 166 KQYAAQLNGVIKLIFQPAEE 185 (445)
T ss_dssp HHTGGGCCSEEEEEEESCTT
T ss_pred HhCcCcCCceEEEEEecccc
Confidence 8764 45566655554443
No 83
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.14 E-value=7.6 Score=33.79 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=19.9
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 37 V~~~spA~~aGgl~~GD~I~~vng~~v~ 64 (93)
T 2dkr_A 37 VIPGGVADRHGGLKRGDQLLSVNGVSVE 64 (93)
T ss_dssp ECTTSHHHHHCCCCTTCBEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3456555554 9999999999998774
No 84
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=56.74 E-value=10 Score=41.73 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=64.9
Q ss_pred HHHHHHHHhccCCCCCCCh---HHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecC---CCCCCCeEEEEEEcCC
Q psy3774 641 KGIELTKNLGNLSANICTP---TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTH---GSSEPPKLIIIKYMNG 714 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP---~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~---GS~~~Prli~l~Y~g~ 714 (963)
+-+.+.|+|++.|+---+| ...++..++.++++|+++++.+ +.+.+.=. |. ..|+++...+.-.
T Consensus 7 ~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~---------~~~~~~~~~~~~~-~~~~i~l~aH~D~ 76 (364)
T 2rb7_A 7 HIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD---------HDGIPSVMVLPEK-GRAGLLLMAHIDV 76 (364)
T ss_dssp HHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE---------ETTEEEEEECSBT-TEEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec---------CCCceEEEEEcCC-CCCeEEEECccCc
Confidence 4577899999999755333 3456777788888999988741 22333222 22 2344544444321
Q ss_pred CCCCCcEEEeccCeeecc---CCCCCCCCCChhhh-cccc-hhhhHHHHHHHHHHhcCCCc-----E--EEEEEEeecc
Q psy3774 715 KFKEAPIVLVGKGVTFDT---GGISIKPSYSMDEM-KYDM-CGAASILGTLYAISEMNLEL-----N--IIGVIVASEN 781 (963)
Q Consensus 715 ~~~~~~i~LVGKGiTFDs---GGislKp~~~M~~M-K~DM-~GAAaVlga~~aia~l~l~v-----n--V~~vi~~~EN 781 (963)
- | +.+-=|.+ ||. |+.= ..|| +|.|+.+++++++.+.+++. + |.-+.-..|=
T Consensus 77 v----p----~~~~p~~~~~~~g~-------~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE 140 (364)
T 2rb7_A 77 V----D----AEDDLFVPRVENDR-------LYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEE 140 (364)
T ss_dssp C----C----CCGGGGSCEEETTE-------EESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGG
T ss_pred C----C----CCCCCCccEEECCE-------EEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccc
Confidence 1 1 01100110 110 1110 1477 47899999999998876544 6 7776666664
No 85
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.55 E-value=7.6 Score=33.81 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=19.3
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 38 ~~~spA~~aGgl~~GD~I~~vng~~v~ 64 (93)
T 2dkr_A 38 IPGGVADRHGGLKRGDQLLSVNGVSVE 64 (93)
T ss_dssp CTTSHHHHHCCCCTTCBEEEETTEECT
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 345555543 9999999999998875
No 86
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=54.33 E-value=30 Score=37.31 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=42.8
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEE
Q psy3774 643 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKY 711 (963)
Q Consensus 643 ~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y 711 (963)
+.+-++|++.|+---....+++..++.++++|+ +++ | +++.+++.-.| ..|+++...+
T Consensus 5 ~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d-------~~gnlia~~~~--~~~~i~l~aH 62 (332)
T 2wyr_A 5 IEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-D-------AIGNLIVELGE--GEERILFMAH 62 (332)
T ss_dssp HHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-C-------TTCCEEEEEES--SSEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-c-------CCCeEEEEecC--CCceEEEEec
Confidence 467889999998666778899999999999998 664 3 57778886555 2466555444
No 87
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=53.37 E-value=32 Score=38.29 Aligned_cols=107 Identities=14% Similarity=-0.010 Sum_probs=64.6
Q ss_pred HHHHHHHhccCCCCC--------C--CHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCC-CCeEEEEE
Q psy3774 145 GIELTKNLGNLSANI--------C--TPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSE-PPKLIIIK 213 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~--------l--tP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~-~p~li~l~ 213 (963)
.+.+-++|++.|+-. + .-...+++.++.++++|+++++- .++.+++.=+|+.. .|.++...
T Consensus 11 ~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~--------~~gnv~a~~~g~~~~~~~i~l~~ 82 (423)
T 1z2l_A 11 IEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD--------EVGNLYGRLNGTEYPQEVVLSGS 82 (423)
T ss_dssp HHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC--------TTSCEEEEECCSSEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe--------cCCcEEEEEcCCCCCCCEEEEEE
Confidence 355667777776533 1 12445788888889999998762 24567776555532 24444443
Q ss_pred EccCCCCCCcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeecC
Q psy3774 214 YMNGKFKEAPIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASENM 285 (963)
Q Consensus 214 y~~~~~~~~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN~ 285 (963)
+.-.- | + ||. . .+++|.|+.+++++++.+.+ ++.+|+-+.-..|=.
T Consensus 83 H~D~V----p---~--------~g~--------~---D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~ 130 (423)
T 1z2l_A 83 HIDTV----V---N--------GGN--------L---DGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEG 130 (423)
T ss_dssp ECCCC----T---T--------BCS--------S---TTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSC
T ss_pred ecCCC----C---C--------CCc--------c---CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccc
Confidence 32111 1 0 111 1 22467889999999998765 567888777777653
No 88
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=52.13 E-value=30 Score=36.69 Aligned_cols=94 Identities=15% Similarity=0.061 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCC
Q psy3774 661 YLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPS 740 (963)
Q Consensus 661 ~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~ 740 (963)
..++..++.++++|++|++.....- ..+-..+++.=+|+...|.++...+.-.- + +|.|
T Consensus 36 ~~~~~i~~~l~~~g~~v~~~~~~~~-~~~~~nvi~~~~g~~~~~~i~l~aH~D~v----~---~g~G------------- 94 (284)
T 1tkj_A 36 ASVDYVKAKLDAAGYTTTLQQFTSG-GATGYNLIANWPGGDPNKVLMAGAHLDSV----S---SGAG------------- 94 (284)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEET-TEEEEEEEEECSCSEEEEEEEEEEECCCC----T---TSCC-------------
T ss_pred HHHHHHHHHHHHcCCeEEEEEeccC-CCCceeEEEEEeCCCCCCEEEEEeecCCC----C---CCCC-------------
Confidence 4677777888888998887432100 00112445544454222333333332110 0 0211
Q ss_pred CChhhhcccc-hhhhHHHHHHHHHHhcC--CCcEEEEEEEeecc
Q psy3774 741 YSMDEMKYDM-CGAASILGTLYAISEMN--LELNIIGVIVASEN 781 (963)
Q Consensus 741 ~~M~~MK~DM-~GAAaVlga~~aia~l~--l~vnV~~vi~~~EN 781 (963)
- .|| +|.|+++.+++++.+.+ ++.+|+.+.-..|=
T Consensus 95 --a----~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 132 (284)
T 1tkj_A 95 --I----NDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEE 132 (284)
T ss_dssp --T----TTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG
T ss_pred --C----ccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcc
Confidence 1 344 78899999999999875 56777777666654
No 89
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=51.46 E-value=45 Score=38.04 Aligned_cols=87 Identities=13% Similarity=0.156 Sum_probs=53.2
Q ss_pred HHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcCCCCCCCcEEEeccCeeeccCCCCCCCC
Q psy3774 661 YLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPS 740 (963)
Q Consensus 661 ~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g~~~~~~~i~LVGKGiTFDsGGislKp~ 740 (963)
..++...+.+++.|++|++ | ..|.+++.=.|+...|.++...+.-.- |+ ||.
T Consensus 71 ~~~~~l~~~l~~~G~~v~~-d-------~~gnvia~~~g~~~~~~i~l~~H~DtV----p~-----------~g~----- 122 (474)
T 2v8h_A 71 AMRDWFTNECESLGCKVKV-D-------KIGNMFAVYPGKNGGKPTATGSHLDTQ----PE-----------AGK----- 122 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEE-B-------TTCCEEEEECCSSCCSCEEEEECCCCC----SS-----------BCS-----
T ss_pred HHHHHHHHHHHHcCCEEEE-e-------cCceEEEEECCCCCCCeEEEEEecccC----CC-----------CCC-----
Confidence 3467778888889999885 2 244566665555433344443332110 11 121
Q ss_pred CChhhhcccchhhhHHHHHHHHHHhcC--CCcEEEEEEEeecc
Q psy3774 741 YSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 781 (963)
Q Consensus 741 ~~M~~MK~DM~GAAaVlga~~aia~l~--l~vnV~~vi~~~EN 781 (963)
.+|| +|.|+.+++++++.+.+ ++.+|.-+.-..|=
T Consensus 123 ---~D~k---~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE 159 (474)
T 2v8h_A 123 ---YDGI---LGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAE 159 (474)
T ss_dssp ---STTH---HHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCS
T ss_pred ---cCCH---HHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcc
Confidence 1333 68889999999998875 45788877766664
No 90
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=51.05 E-value=7.8 Score=33.87 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=18.3
Q ss_pred eecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.+|.|...| .++||+|.+.||+.|.
T Consensus 37 ~~~spA~~aGl~~GD~I~~ing~~v~ 62 (95)
T 3r68_A 37 EPGSPAEAAGLKNNDLVVAVNGKSVE 62 (95)
T ss_dssp CTTSHHHHHTCCTTEEEEEETTEECT
T ss_pred CCCCHHHHCCCCCCCEEEEECCEECC
Confidence 344443333 8999999999998864
No 91
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=48.44 E-value=7.4 Score=34.48 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=21.2
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....++|||+|++.||+.|.
T Consensus 8 V~~~spA~~GL~~GD~I~~InG~~v~ 33 (91)
T 2kjp_A 8 VVENMPAKGKIEVGDKIISADGKNYQ 33 (91)
T ss_dssp CCCSSCCSSCCCSSCEEEEETTBCCS
T ss_pred ECCCChHHHcCCCCCEEEEECCEECC
Confidence 34677766679999999999999874
No 92
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=48.18 E-value=2e+02 Score=27.80 Aligned_cols=127 Identities=12% Similarity=0.085 Sum_probs=76.0
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCcccc-ccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEE-
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSI-VKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRIL- 533 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~-~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vl- 533 (963)
|++++. ..+..+.+.|++|=+.......... ...+. .+..+.+..+... .-+.|+...... ...+.++|+
T Consensus 2 ~~i~i~----~GDI~~~~~daIVnaaN~~l~~ggGv~~aI~~~~G~~l~~~c~~~g-~~~~G~a~it~~-~~L~~~~Vih 75 (159)
T 2dx6_A 2 ARIRVV----QGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIG-KIRVGEAAVTGA-GNLPVRYVIH 75 (159)
T ss_dssp CEEEEE----ESCGGGCCSSEEEEEEETTCCCCSTTHHHHHHHHCTHHHHHHHHHC-CCCTTCEEEEEC-TTSSSSEEEE
T ss_pred eEEEEE----ECcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHhcC-CCCCCcEEEecC-CCCCCCEEEE
Confidence 678888 6788888999999998775433211 11111 2223333333211 245688776654 334556554
Q ss_pred EEEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHH
Q psy3774 534 LVNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIII 592 (963)
Q Consensus 534 lvGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg 592 (963)
++|.-- . +-+.+.++++...+.+.+.+.+++++++..-.........+...+.+.+.
T Consensus 76 ~vgp~~-~-~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~ 132 (159)
T 2dx6_A 76 AAVLGD-E-PASLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEE 132 (159)
T ss_dssp EEEESS-S-CCCHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHH
T ss_pred EeCCCC-C-CchHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHH
Confidence 355421 1 33578899999999999999999999886544444444444444444443
No 93
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=47.66 E-value=35 Score=36.19 Aligned_cols=94 Identities=14% Similarity=0.009 Sum_probs=51.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEE-EEccCCCCCCcEEEcccceEEecCCCCCC
Q psy3774 163 TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIII-KYMNGKFKEAPIVLVGKGVTFDTGGISIK 241 (963)
Q Consensus 163 ~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l-~y~~~~~~~~~i~lVGKGiTFDtGG~~lK 241 (963)
...++++++.++++|+++++..-..- ..+-..+++.=+|+...|.++.. +|.--+ +|.|
T Consensus 35 ~~~~~~i~~~l~~~g~~v~~~~~~~~-~~~~~nvi~~~~g~~~~~~i~l~aH~D~v~--------~g~G----------- 94 (284)
T 1tkj_A 35 KASVDYVKAKLDAAGYTTTLQQFTSG-GATGYNLIANWPGGDPNKVLMAGAHLDSVS--------SGAG----------- 94 (284)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEEET-TEEEEEEEEECSCSEEEEEEEEEEECCCCT--------TSCC-----------
T ss_pred HHHHHHHHHHHHHcCCeEEEEEeccC-CCCceeEEEEEeCCCCCCEEEEEeecCCCC--------CCCC-----------
Confidence 35778888888888998887432100 00112444443454222333333 332111 1221
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeee
Q psy3774 242 PSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASE 283 (963)
Q Consensus 242 ~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~E 283 (963)
. -.|.+|.|+++.+++++.+.+ ++.+|+.+.-..|
T Consensus 95 --a-----~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 131 (284)
T 1tkj_A 95 --I-----NDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAE 131 (284)
T ss_dssp --T-----TTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred --C-----ccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCc
Confidence 1 123488899999999999875 5566666555544
No 94
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=47.38 E-value=73 Score=35.28 Aligned_cols=111 Identities=9% Similarity=0.109 Sum_probs=69.7
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCC-CeEeeecCCCCCCCeEEEEEEcCCCCCC
Q psy3774 640 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKM-GSLLSVTHGSSEPPKLIIIKYMNGKFKE 718 (963)
Q Consensus 640 a~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gm-g~~laVg~GS~~~Prli~l~Y~g~~~~~ 718 (963)
-+-+.+.|+|.+.|.--..-...++...+.++++|++|+... .|+ .++++.=+|....|.++.....-.-
T Consensus 16 ~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~------~g~~~~via~~~g~~~g~~i~l~ah~D~v--- 86 (394)
T 3ram_A 16 YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEI------AGHATGFIATYDSGLDGPAIGFLAEYDAL--- 86 (394)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEE------TTEEEEEEEEEECSSSSCEEEEEECCCCC---
T ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCC------CCCceEEEEEEeCCCCCCEEEEEEecccC---
Confidence 456889999999998777777788888999999999988742 121 2566654554333544443332111
Q ss_pred CcEEEeccCeeeccCCCCCCCCCChhhhcccchhhhHHHHHHHHHHhc--CCCcEEEEEEEeecc
Q psy3774 719 APIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEM--NLELNIIGVIVASEN 781 (963)
Q Consensus 719 ~~i~LVGKGiTFDsGGislKp~~~M~~MK~DM~GAAaVlga~~aia~l--~l~vnV~~vi~~~EN 781 (963)
| |++ .+.+ .||-| |+.+++++++.+. .++-+|.-+.-..|=
T Consensus 87 -p----g~~-----------ha~G-----~d~~~-a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE 129 (394)
T 3ram_A 87 -P----GLG-----------HACG-----HNIIG-TASVLGAIGLKQVIDQIGGKVVVLGCPAEE 129 (394)
T ss_dssp -T----TTS-----------STTC-----HHHHH-HHHHHHHHHHHTTHHHHCSEEEEEECCCTT
T ss_pred -C----Ccc-----------eECC-----ccHHH-HHHHHHHHHHHHhHhhCCceEEEEEECCcc
Confidence 1 221 1122 25545 4578888888875 456777777766665
No 95
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=47.07 E-value=13 Score=32.57 Aligned_cols=26 Identities=15% Similarity=0.310 Sum_probs=21.6
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 36 V~~~spA~~aGL~~GD~I~~ing~~v~ 62 (93)
T 2dls_A 36 VRPGGAAMKAGVKEGDRIIKVNGTMVT 62 (93)
T ss_dssp ECSSSTTTTTTCCSSCEEEEETTEECS
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 4567777666 9999999999998875
No 96
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=45.39 E-value=10 Score=35.68 Aligned_cols=27 Identities=15% Similarity=0.241 Sum_probs=22.7
Q ss_pred EeeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
...+|.|...+++|||+|++.||+.|.
T Consensus 31 ~V~~~spA~~aL~~GD~Il~InG~~v~ 57 (125)
T 2hga_A 31 SVVPGSPASKVLTPGLVIESINGMPTS 57 (125)
T ss_dssp EECSSSGGGGTSCTTCEEEEETTEECS
T ss_pred EECCCChHHHhcCCCCEEEEECCEEcC
Confidence 445788877779999999999999874
No 97
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.72 E-value=13 Score=33.09 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=21.7
Q ss_pred EeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
-..+|.|.-.| ++|||+|.+.||+.|+
T Consensus 36 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 63 (102)
T 2d90_A 36 DIEPGSPAEAAGLKNNDLVVAVNGKSVE 63 (102)
T ss_dssp CCCTTSTTTTTTCCTTCEEEEESSCBCT
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 34567777666 9999999999998774
No 98
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=41.89 E-value=15 Score=32.06 Aligned_cols=27 Identities=15% Similarity=0.287 Sum_probs=22.4
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
-..+|.|...+ +++||+|.+.||+.|+
T Consensus 35 ~V~~~spA~~aGL~~GD~I~~ing~~v~ 62 (93)
T 2dls_A 35 SVRPGGAAMKAGVKEGDRIIKVNGTMVT 62 (93)
T ss_dssp EECSSSTTTTTTCCSSCEEEEETTEECS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 44578887777 9999999999998864
No 99
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=41.63 E-value=94 Score=34.38 Aligned_cols=111 Identities=8% Similarity=0.081 Sum_probs=67.1
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhc-CCeEeeecCCCCCCCeEEEEEEccCCCCC
Q psy3774 143 SKGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLK-MGSLLSVTHGSSEPPKLIIIKYMNGKFKE 221 (963)
Q Consensus 143 a~~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~g-m~~~laVg~gS~~~p~li~l~y~~~~~~~ 221 (963)
.+-+.+.|+|.+.|.--..-...++++.+.++++|++++.... | -..+++.=+|....|.++...+.-.
T Consensus 16 ~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~------g~~~~via~~~g~~~g~~i~l~ah~D~---- 85 (394)
T 3ram_A 16 YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIA------GHATGFIATYDSGLDGPAIGFLAEYDA---- 85 (394)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEET------TEEEEEEEEEECSSSSCEEEEEECCCC----
T ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCC------CCceEEEEEEeCCCCCCEEEEEEeccc----
Confidence 4568899999999987777788899999999999999886421 1 1256665444433344443333211
Q ss_pred CcEEEcccceEEecCCCCCCCCCCccccccchhhHHHHHHHHHHHHhc--CCCcEEEEEEEeeec
Q psy3774 222 APIVLVGKGVTFDTGGISIKPSYSMDEMKYDMCGAASILGTLYAISEM--NLELNIIGVIVASEN 284 (963)
Q Consensus 222 ~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l--~l~vnv~~~~~~~EN 284 (963)
-| |+ |+.--.||-|+ +.+++++++.+. .++-+|.-+.-..|=
T Consensus 86 vp----g~----------------~ha~G~d~~~a-~~l~aa~~L~~~~~~~~g~v~~~f~~~EE 129 (394)
T 3ram_A 86 LP----GL----------------GHACGHNIIGT-ASVLGAIGLKQVIDQIGGKVVVLGCPAEE 129 (394)
T ss_dssp CT----TT----------------SSTTCHHHHHH-HHHHHHHHHHTTHHHHCSEEEEEECCCTT
T ss_pred CC----Cc----------------ceECCccHHHH-HHHHHHHHHHHhHhhCCceEEEEEECCcc
Confidence 11 22 11111266554 567777777765 344566655555554
No 100
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=41.15 E-value=13 Score=35.13 Aligned_cols=27 Identities=15% Similarity=0.241 Sum_probs=23.0
Q ss_pred EeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
...+|.|...++++||+|++.||+.|.
T Consensus 31 ~V~~~spA~~aL~~GD~Il~InG~~v~ 57 (125)
T 2hga_A 31 SVVPGSPASKVLTPGLVIESINGMPTS 57 (125)
T ss_dssp EECSSSGGGGTSCTTCEEEEETTEECS
T ss_pred EECCCChHHHhcCCCCEEEEECCEEcC
Confidence 456888887779999999999998774
No 101
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=41.09 E-value=11 Score=33.48 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=21.5
Q ss_pred eeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
..+|.|....++|||+|++.||+.|.
T Consensus 8 V~~~spA~~GL~~GD~I~~InG~~v~ 33 (91)
T 2kjp_A 8 VVENMPAKGKIEVGDKIISADGKNYQ 33 (91)
T ss_dssp CCCSSCCSSCCCSSCEEEEETTBCCS
T ss_pred ECCCChHHHcCCCCCEEEEECCEECC
Confidence 45677776689999999999999874
No 102
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=41.08 E-value=2.4e+02 Score=28.71 Aligned_cols=122 Identities=15% Similarity=0.054 Sum_probs=69.7
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCcccc-ccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEE
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSI-VKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILL 534 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~-~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vll 534 (963)
+++++. ..+..+.+.|++|=+.......... ...+. .+..+.+..+... .-+.|+...... ...+.++|+=
T Consensus 33 ~~i~i~----~GDIt~~~vDaIVNaaN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~-~~~~G~a~iT~g-~~L~~k~VIH 106 (199)
T 3kh6_A 33 ITFQVA----TGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLA-AQPHRDFIITPG-GCLKCKIIIH 106 (199)
T ss_dssp EEEEEE----ESCGGGCCSSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH-TSCCCSSEEEEC-TTSSSSEEEE
T ss_pred EEEEEE----ecccccCcCCEEEECCCCCCCCCchHHHHHHHHhhHHHHHHHHHhC-CCCCCeEEEecC-CCCCCCEEEE
Confidence 456666 6778888999999998775433211 11111 2223333222210 124577665543 3456677665
Q ss_pred EEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHH
Q psy3774 535 VNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIII 593 (963)
Q Consensus 535 vGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~ 593 (963)
+ .|+ . .++++...+.+.+.+.+++++++..-....-....+..++.+++.+
T Consensus 107 ~-vgp-~------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v 157 (199)
T 3kh6_A 107 V-PGG-K------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAI 157 (199)
T ss_dssp E-ETT-S------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHH
T ss_pred e-CCC-H------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHH
Confidence 4 565 2 3788888888888899999998865444433444444444444433
No 103
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=40.88 E-value=69 Score=34.91 Aligned_cols=108 Identities=17% Similarity=0.176 Sum_probs=62.2
Q ss_pred HHHHHHHhccCCCCC--C---ChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCCCCCeEEEEEEcC--C
Q psy3774 642 GIELTKNLGNLSANI--C---TPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYMN--G 714 (963)
Q Consensus 642 g~~~aRdL~n~P~N~--l---tP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~~~Prli~l~Y~g--~ 714 (963)
-+.+-|+|++.|+-- - .-...++..++.++ |+++++.+.. .+-+.+++ =+|+ |+-++.-+|.- .
T Consensus 11 ~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~----~~~~~~~a-~~g~--~~i~l~~H~D~vp~ 81 (369)
T 2f7v_A 11 TLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHG----DGAVSLYA-VRGT--PKYLFNVHLDTVPD 81 (369)
T ss_dssp HHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECS----TTCEEEEE-EESC--CSEEEEEECCBCCC
T ss_pred HHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcC----CCceEEEE-EcCC--CeEEEEeeecccCC
Confidence 467889999988632 2 22456777777776 9998876421 23466777 4566 55444444432 1
Q ss_pred CC--CCCcE-------EEeccCeeeccCCCCCCCCCChhhhcccc-hhhhHHHHHHHHHHhcCCCcEEEEEEEeeccC
Q psy3774 715 KF--KEAPI-------VLVGKGVTFDTGGISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNLELNIIGVIVASENM 782 (963)
Q Consensus 715 ~~--~~~~i-------~LVGKGiTFDsGGislKp~~~M~~MK~DM-~GAAaVlga~~aia~l~l~vnV~~vi~~~ENm 782 (963)
.. ...|. .+.|.|. .|| +|.|+.+.++++ ++.+|.-+.-..|=.
T Consensus 82 ~~~w~~~pf~~~~~~g~l~grG~-------------------~D~k~g~a~~l~a~~~-----~~~~v~~~~~~~EE~ 135 (369)
T 2f7v_A 82 SPHWSADPHVMRRTEDRVIGLGV-------------------CDIKGAAAALVAAANA-----GDGDAAFLFSSDEEA 135 (369)
T ss_dssp CSSCSSCTTSCEECSSEEECTTT-------------------TTTHHHHHHHHHHHTT-----CCCCEEEEEESCTTS
T ss_pred CCCCCCCCCCcEEECCEEEeccc-------------------ccccHHHHHHHHHHhc-----CCCCEEEEEEeCccc
Confidence 11 01121 1333333 344 566777777665 677777777777654
No 104
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=40.82 E-value=12 Score=33.44 Aligned_cols=27 Identities=11% Similarity=0.451 Sum_probs=21.9
Q ss_pred EeeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
-..+|.|...-++|||+|++.||+.|.
T Consensus 13 ~V~~~spA~~GL~~GD~I~~Ing~~v~ 39 (100)
T 3i18_A 13 SVKDDVPAADVLHAGDLITEIDGNAFK 39 (100)
T ss_dssp EECTTSGGGGTCCTTCEEEEETTBCCS
T ss_pred EeCCCCchHHCCCCCCEEEEECCEECC
Confidence 455677766679999999999999874
No 105
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=40.78 E-value=8.7 Score=33.25 Aligned_cols=25 Identities=8% Similarity=0.126 Sum_probs=19.6
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|.
T Consensus 36 ~~~spA~~aGl~~GD~I~~ing~~v~ 61 (90)
T 2eaq_A 36 EAGSPAEFSQLQVDDEIIAINNTKFS 61 (90)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECC
T ss_pred CCCChHHHcCCCCCCEEEEECCEEcc
Confidence 456555545 9999999999999874
No 106
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=40.44 E-value=66 Score=36.59 Aligned_cols=87 Identities=11% Similarity=0.080 Sum_probs=53.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEE-EEccCCCCCCcEEEcccceEEecCCCCCC
Q psy3774 163 TYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIII-KYMNGKFKEAPIVLVGKGVTFDTGGISIK 241 (963)
Q Consensus 163 ~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l-~y~~~~~~~~~i~lVGKGiTFDtGG~~lK 241 (963)
...+++..+.++++|++|++- ..+.+++.=.|+...|.++.. +|.--+. ||.
T Consensus 70 ~~~~~~l~~~l~~~G~~v~~d--------~~gnvia~~~g~~~~~~i~l~~H~DtVp~----------------~g~--- 122 (474)
T 2v8h_A 70 GAMRDWFTNECESLGCKVKVD--------KIGNMFAVYPGKNGGKPTATGSHLDTQPE----------------AGK--- 122 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEEEB--------TTCCEEEEECCSSCCSCEEEEECCCCCSS----------------BCS---
T ss_pred HHHHHHHHHHHHHcCCEEEEe--------cCceEEEEECCCCCCCeEEEEEecccCCC----------------CCC---
Confidence 445788888889999998852 244566664555333333333 3322111 121
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHhcC--CCcEEEEEEEeeec
Q psy3774 242 PSYSMDEMKYDMCGAASILGTLYAISEMN--LELNIIGVIVASEN 284 (963)
Q Consensus 242 ~~~~M~~Mk~Dm~GaAaV~g~~~a~a~l~--l~vnv~~~~~~~EN 284 (963)
. .+++|.|+.+++++++.+.+ ++.+|..++-..|=
T Consensus 123 -----~---D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE 159 (474)
T 2v8h_A 123 -----Y---DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAE 159 (474)
T ss_dssp -----S---TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCS
T ss_pred -----c---CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcc
Confidence 1 22378899999999998875 45677776666665
No 107
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=40.04 E-value=18 Score=31.18 Aligned_cols=24 Identities=21% Similarity=0.412 Sum_probs=18.9
Q ss_pred ccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~a~kPgDVits~~GkTVE 803 (963)
+|.|....++|||+|.+.||+.|+
T Consensus 35 ~~spA~aGl~~GD~I~~vng~~v~ 58 (88)
T 3bpu_A 35 VDSPRSRGLKEGDLIVEVNKKNVQ 58 (88)
T ss_dssp CC--CCTTCCTTCEEEEETTEECT
T ss_pred cCChhHhCCCCCCEEEEECCEEcC
Confidence 677777569999999999998874
No 108
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=39.50 E-value=65 Score=36.98 Aligned_cols=62 Identities=5% Similarity=0.019 Sum_probs=44.4
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC----CCCCeEEEEEEc
Q psy3774 146 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS----SEPPKLIIIKYM 215 (963)
Q Consensus 146 ~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS----~~~p~li~l~y~ 215 (963)
+.+.|+|++.|+---.....+++..+.++++|++++.-. .+.+++.=+|+ ..|+.++.-+|.
T Consensus 17 ~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~--------~~nv~a~~~g~~g~~~~~~v~l~aH~D 82 (490)
T 3mru_A 17 WQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP--------TGNVFIKKPATPGMENKKGVVLQAHID 82 (490)
T ss_dssp HHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT--------TCCEEEEECCCTTCTTCCCEEEEEECC
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC--------CCeEEEEEcCCCCCCCCCeEEEEeccC
Confidence 567889999988666778899999999999999988621 35677765554 334455555554
No 109
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=39.09 E-value=7.1 Score=34.48 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=19.9
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|.
T Consensus 40 V~~~spA~~aGl~~GD~I~~ing~~v~ 66 (98)
T 2jxo_A 40 VDPDSPAEASGLRAQDRIVEVNGVCME 66 (98)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456555444 9999999999998874
No 110
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=39.02 E-value=16 Score=31.13 Aligned_cols=25 Identities=8% Similarity=0.193 Sum_probs=19.3
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 31 ~~~spA~~aGl~~GD~I~~ing~~v~ 56 (83)
T 2kv8_A 31 MRGSPADFVGLRAGDQILAVNEINVK 56 (83)
T ss_dssp CTTSTTTTTTCCTTCEEEEETTEECS
T ss_pred CCCChHHHcCCCCCCEEEEECCEECC
Confidence 355555443 8999999999998874
No 111
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=38.69 E-value=8.9 Score=33.32 Aligned_cols=26 Identities=12% Similarity=0.265 Sum_probs=19.5
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|.
T Consensus 34 V~~~spA~~aGl~~GD~I~~ing~~v~ 60 (91)
T 2pkt_A 34 VTPGSKAALANLCIGDVITAIDGENTS 60 (91)
T ss_dssp ECTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456554433 9999999999998774
No 112
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=38.38 E-value=3.1e+02 Score=27.33 Aligned_cols=142 Identities=14% Similarity=0.097 Sum_probs=78.6
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCcccc-ccccC--chHHHHHHHHcCCCCCCCCCEEEEcccCCCCccEEEE
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSI-VKDID--KYGEITNILKSGDLNEKLGSTLLLRNIQKINAKRILL 534 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~-~~~ld--~~g~l~~~i~~~~f~gk~ge~~~l~~~~~~~~~~vll 534 (963)
+++++. ..+..+.+.|++|=+..+....... ...+. .+..+.+-.+.-. .-+.|+...... ...+.++|+=
T Consensus 22 ~~i~i~----~GDIt~~~~DaIVNaaN~~l~~ggGV~~aI~~aaG~~l~~ec~~~~-~~~~G~a~iT~~-~~L~~k~VIH 95 (183)
T 4abl_A 22 IIFQVA----SGDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQA-QQRKNDYIITGG-GFLRCKNIIH 95 (183)
T ss_dssp EEEEEE----ESCGGGCBCSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH-HHSCCSEEEEEC-TTSBSSEEEE
T ss_pred EEEEEE----eCcccCcccCEEEECCCCCCCCCccHHHHHHHHhhHHHHHHHHHhc-CCCCCceEEecC-CCCCCCEEEE
Confidence 456777 6788888999999998765432211 01111 1222222222100 134677776554 3456676654
Q ss_pred EEcCCCCCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCccCCCCCCccCc
Q psy3774 535 VNLGDKKKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQKSKKKPIKINI 614 (963)
Q Consensus 535 vGLG~~~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk~~~~~~~~~l 614 (963)
+ +|+ . .++++...+.+.+.+.+++++++..-....-....+..++.+++.+. +| -.+.+. ..+
T Consensus 96 ~-vgP-~------~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~----~f---l~~~~~--~~l 158 (183)
T 4abl_A 96 V-IGG-N------DVKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIE----DF---VQKGSA--QSV 158 (183)
T ss_dssp E-ETT-S------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHH----HH---HHTTCC--SSC
T ss_pred e-CcH-H------HHHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHH----HH---HHhcCC--CCC
Confidence 4 566 3 17888888888888999999988654443333444444454444432 22 111111 246
Q ss_pred eEEEEEec
Q psy3774 615 KKIIFALD 622 (963)
Q Consensus 615 ~~l~l~~~ 622 (963)
++|.|++-
T Consensus 159 ~~V~fv~f 166 (183)
T 4abl_A 159 KKVKVVIF 166 (183)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 77888773
No 113
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=38.26 E-value=12 Score=33.23 Aligned_cols=26 Identities=23% Similarity=0.445 Sum_probs=21.0
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....++|||+|.+.||+.|.
T Consensus 12 V~~~spA~~GL~~GD~Il~InG~~v~ 37 (94)
T 2kl1_A 12 VLPNMPAAGRLEAGDRIAAIDGQPIN 37 (94)
T ss_dssp CCTTSTTBTTBCTTCEEEEETTBCCC
T ss_pred ECCCChHHhCCCCCCEEEEECCEECC
Confidence 34566666679999999999999874
No 114
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=37.85 E-value=9.9 Score=32.88 Aligned_cols=26 Identities=8% Similarity=0.123 Sum_probs=20.3
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|.
T Consensus 35 V~~~spA~~aGl~~GD~I~~ing~~v~ 61 (90)
T 2eaq_A 35 VEAGSPAEFSQLQVDDEIIAINNTKFS 61 (90)
T ss_dssp ECTTSHHHHTTCCTTCEEEEETTEECC
T ss_pred ECCCChHHHcCCCCCCEEEEECCEEcc
Confidence 3466665555 9999999999999873
No 115
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=37.62 E-value=8.6 Score=33.80 Aligned_cols=26 Identities=19% Similarity=0.488 Sum_probs=20.5
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 37 V~~~spA~~aGl~~GD~I~~ing~~v~ 63 (96)
T 2v90_A 37 VDPGLPAKKAGMQAGDRLVAVAGESVE 63 (96)
T ss_dssp ECTTSHHHHTTCCTTEEEEEETTEECT
T ss_pred ECCCChHHHcCCCCCCEEEEECCEECC
Confidence 3566665555 9999999999998874
No 116
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=37.41 E-value=9.6 Score=32.82 Aligned_cols=25 Identities=20% Similarity=0.425 Sum_probs=18.7
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 35 ~~~spA~~aGl~~GD~I~~ing~~v~ 60 (88)
T 2uzc_A 35 KDGGKAAQANVRIGDVVLSIDGINAQ 60 (88)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCChHHHcCCCCCCEEEEECCEECC
Confidence 345554333 9999999999998764
No 117
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=37.37 E-value=3.3e+02 Score=27.29 Aligned_cols=131 Identities=9% Similarity=0.045 Sum_probs=75.0
Q ss_pred ccceeEeeecccccccccccCCCEEEEEEecCCCccc-cccccC--chHHHH----HHHHc-CCCCCCCCCEEEEcccCC
Q psy3774 455 KIIMDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSS-IVKDID--KYGEIT----NILKS-GDLNEKLGSTLLLRNIQK 526 (963)
Q Consensus 455 ~~~M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~-~~~~ld--~~g~l~----~~i~~-~~f~gk~ge~~~l~~~~~ 526 (963)
.+.+++++. ..+..+.+.|++|=+..+...... ....+. .+..+. ++++. +. -+.|+...... ..
T Consensus 16 ~~~~~i~i~----~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~--~~~G~a~iT~~-~~ 88 (193)
T 1yd9_A 16 FLGQKLQVV----QADIASIDSDAVVHPTNTDFYIGGEVGSTLEKKGGKEFVEAVLELRKKNGP--LEVAGAAVSAG-HG 88 (193)
T ss_dssp TTSCEEEEE----CSCGGGCCCSEEEEECCTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCS--CCTTCEEEEEC-TT
T ss_pred CCCCEEEEE----eCccCcCcCCEEEECCCccCCCCchHHHHHHHHhhHHHHHHHHHHHHHcCC--CCCCCEEEecC-CC
Confidence 334678888 788888999999998766433211 111111 112222 22221 22 34677665543 44
Q ss_pred CCccEEEEEEcCCC-CCcCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHH
Q psy3774 527 INAKRILLVNLGDK-KKKIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIII 593 (963)
Q Consensus 527 ~~~~~vllvGLG~~-~~~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~ 593 (963)
.+.++|+=+ +|+. ..+-..+.++++...+.+.+.+.+++++++..-....-....+..++.+++.+
T Consensus 89 L~~k~VIH~-vgP~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v 155 (193)
T 1yd9_A 89 LPAKFVIHC-NSPVWGSDKCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAI 155 (193)
T ss_dssp SSSSEEEEE-CCCCTTSTTHHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHH
T ss_pred CCCCEEEEe-CCCCcCCcchHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHH
Confidence 566666543 3440 11123567888898999999999999998876544444444444555554443
No 118
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=37.28 E-value=9.3 Score=32.90 Aligned_cols=25 Identities=32% Similarity=0.668 Sum_probs=18.9
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 34 ~~~spA~~aGL~~GD~I~~ing~~v~ 59 (87)
T 2pa1_A 34 AERGKAKDADLRPGDIIVAINGESAE 59 (87)
T ss_dssp CSSSHHHHTTCCTTCEEEEETTEEST
T ss_pred CCCChHHHcCCCCCCEEEEECCEECC
Confidence 445554444 9999999999998764
No 119
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=36.83 E-value=1.4e+02 Score=33.82 Aligned_cols=62 Identities=6% Similarity=-0.015 Sum_probs=44.3
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC---CCCCeEEEEEE
Q psy3774 642 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS---SEPPKLIIIKY 711 (963)
Q Consensus 642 g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS---~~~Prli~l~Y 711 (963)
-+.+-|+|++.|.---.....++..++.+++.|+++++.. .+.+++.=.|+ ...|.++...+
T Consensus 13 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--------~~nv~a~~~g~~g~~~~~~i~l~aH 77 (487)
T 2qyv_A 13 LWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE--------VGNVLIRKPATVGMENRKPVVLQAH 77 (487)
T ss_dssp HHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT--------TCCEEEEECCCTTCTTBCCEEEEEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC--------CCcEEEEeCCCCCCCCCCeEEEEcc
Confidence 3677899999998666678889999999999999988632 45788776664 23344444433
No 120
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=36.47 E-value=12 Score=34.10 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=21.5
Q ss_pred EeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
-..+|.|.-.| ++|||+|.+.||+.|+
T Consensus 44 ~V~~~spA~~aGL~~GD~I~~ing~~v~ 71 (114)
T 2edz_A 44 VIEEGSPAEKAGLLDGDRVLRINGVFVD 71 (114)
T ss_dssp CCCTTCTTGGGTCCTTCEEEEESSSBCS
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECC
Confidence 34567776666 9999999999998774
No 121
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=36.41 E-value=3.7e+02 Score=27.54 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=82.4
Q ss_pred eeEeeecccccccccccCCCEEEEEEecCCCcccc-ccccC------chHHHHHHHHc-CCCCCCCCCEEEEcccCCCCc
Q psy3774 458 MDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSSI-VKDID------KYGEITNILKS-GDLNEKLGSTLLLRNIQKINA 529 (963)
Q Consensus 458 M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~~-~~~ld------~~g~l~~~i~~-~~f~gk~ge~~~l~~~~~~~~ 529 (963)
+++++. ..+..+.+.|++|=+..+....... ...+. +.....++++. +. -+.|+...... ...+.
T Consensus 37 ~~I~v~----~GDIt~~~vDaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~--~~~G~a~iT~~-~~L~~ 109 (214)
T 3q6z_A 37 VVLIVQ----QGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGR--LLPGNATISKA-GKLPY 109 (214)
T ss_dssp EEEEEE----ECCTTSCSSSEEEEEECTTCCCCSHHHHHHHHHHCTHHHHHHHHHHHHHCC--CCTTCEEEEEC-TTSSS
T ss_pred cEEEEE----ecccccCcCCEEEeCCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHHHcCC--CCCCeEEEEcC-CCCCC
Confidence 567777 6788889999999998765432211 01110 12222233322 22 24588776654 44567
Q ss_pred cEEEEEEcCCCCCc--C---CHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHHHhcCcccCCCcc
Q psy3774 530 KRILLVNLGDKKKK--I---KESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIIIISDNLYRSDAQK 604 (963)
Q Consensus 530 ~~vllvGLG~~~~~--~---~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~l~~Y~f~~yk 604 (963)
++|+=+ +|+ .-. . ..+.++++...+.+.+.+.+++++++..-....-....+..++.+++.+. +|-+
T Consensus 110 k~VIH~-VgP-~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~----~fl~-- 181 (214)
T 3q6z_A 110 HHVIHA-VGP-RWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIK----ENFQ-- 181 (214)
T ss_dssp SEEEEE-ECC-CCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHH----HHTS--
T ss_pred CEEEEe-cCC-cccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHH----HHHH--
Confidence 777644 444 211 1 13568888888888888999999988654444333444444454444432 2221
Q ss_pred CCCCCCccCceEEEEEec
Q psy3774 605 SKKKPIKINIKKIIFALD 622 (963)
Q Consensus 605 ~~~~~~~~~l~~l~l~~~ 622 (963)
+.+. ...+++|.|+.-
T Consensus 182 ~~~~--~~~l~~V~fv~~ 197 (214)
T 3q6z_A 182 FKKD--GHCLKEIYLVDV 197 (214)
T ss_dssp SCC----CCCCEEEEEES
T ss_pred hcCC--CCCCCEEEEEeC
Confidence 1111 124678888763
No 122
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=36.31 E-value=13 Score=33.19 Aligned_cols=28 Identities=11% Similarity=0.464 Sum_probs=22.6
Q ss_pred EEeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 279 IVASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 279 ~~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
....+|.|....++|||+|++.||+.|.
T Consensus 12 ~~V~~~spA~~GL~~GD~I~~Ing~~v~ 39 (100)
T 3i18_A 12 MSVKDDVPAADVLHAGDLITEIDGNAFK 39 (100)
T ss_dssp EEECTTSGGGGTCCTTCEEEEETTBCCS
T ss_pred EEeCCCCchHHCCCCCCEEEEECCEECC
Confidence 3456777776679999999999999874
No 123
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=35.94 E-value=9.3 Score=34.69 Aligned_cols=26 Identities=12% Similarity=0.392 Sum_probs=20.7
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...+ ++|||+|++.||+.|.
T Consensus 42 V~~~spA~~aGl~~GD~I~~ing~~v~ 68 (113)
T 2pzd_A 42 VILGSPAHRAGLRPGDVILAIGEQMVQ 68 (113)
T ss_dssp EBTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred eCCCChHHHcCCCCCCEEEEECCEECC
Confidence 4466666555 9999999999998874
No 124
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=35.72 E-value=18 Score=32.03 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=22.1
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ +++||+|.+.||+.|+
T Consensus 36 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 63 (102)
T 2d90_A 36 DIEPGSPAEAAGLKNNDLVVAVNGKSVE 63 (102)
T ss_dssp CCCTTSTTTTTTCCTTCEEEEESSCBCT
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 45577777777 9999999999998763
No 125
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=35.61 E-value=79 Score=35.99 Aligned_cols=63 Identities=8% Similarity=0.006 Sum_probs=44.7
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCC----CCCCeEEEEEEc
Q psy3774 145 GIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS----SEPPKLIIIKYM 215 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~ltP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS----~~~p~li~l~y~ 215 (963)
-+.+-|+|+..|.-.-.....+++.++.++++|+++++.. .+.+++.=+|+ ..|+.++.-+|.
T Consensus 13 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--------~~nv~a~~~g~~g~~~~~~i~l~aH~D 79 (487)
T 2qyv_A 13 LWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE--------VGNVLIRKPATVGMENRKPVVLQAHLD 79 (487)
T ss_dssp HHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT--------TCCEEEEECCCTTCTTBCCEEEEEESC
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC--------CCcEEEEeCCCCCCCCCCeEEEEccCC
Confidence 3567889999888666778899999999999999987632 45677765553 234444444444
No 126
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=35.39 E-value=12 Score=32.54 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=19.0
Q ss_pred eccCCC----CCCCCCCCEEEccCCeEEe
Q psy3774 779 SENMLS----GNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~----g~a~kPgDVits~~GkTVE 803 (963)
.++.|+ ...++|||+|++.||+.|.
T Consensus 24 ~~~~~~s~A~~aGl~~GD~I~~ing~~v~ 52 (87)
T 2i6v_A 24 SPGKDPVLFESIGLQDGDMAVALNGLDLT 52 (87)
T ss_dssp EECSCHHHHHHTTCCTTCEEEEETTEETT
T ss_pred EeCCCCCHHHHCCCCCCCEEEEECCEECC
Confidence 455554 2349999999999999873
No 127
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=35.37 E-value=19 Score=33.99 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=22.8
Q ss_pred EEEeeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 775 VIVASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 775 vi~~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
|.-..+|.|....++|||+|++.||+.|.
T Consensus 61 V~~V~~~spA~aGL~~GD~I~~inG~~v~ 89 (134)
T 2l97_A 61 VRSVQSNMPANGHLEKYDVITKVDDKEIA 89 (134)
T ss_dssp EEECSTTSGGGTTSCSSCEEEEETTEECC
T ss_pred EEEECCCCchHHCCCCCCEEEEECCEEcC
Confidence 33456777766559999999999999884
No 128
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=35.37 E-value=20 Score=30.75 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=19.3
Q ss_pred eecCCCCCCCCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
++|.|....++|||+|.+.||+.|+
T Consensus 34 v~~spA~aGl~~GD~I~~vng~~v~ 58 (88)
T 3bpu_A 34 IVDSPRSRGLKEGDLIVEVNKKNVQ 58 (88)
T ss_dssp CCC--CCTTCCTTCEEEEETTEECT
T ss_pred ecCChhHhCCCCCCEEEEECCEEcC
Confidence 3787777569999999999998773
No 129
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=35.04 E-value=25 Score=31.76 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=23.6
Q ss_pred CcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...+ ++|||+|.+.||+.|+
T Consensus 42 gv~V~~V---~~~s~A~~aGL~~GD~Il~vng~~v~ 74 (114)
T 1x5n_A 42 GIFISHV---KPGSLSAEVGLEIGDQIVEVNGVDFS 74 (114)
T ss_dssp SEEEEEE---CTTSTTTTTTCCTTCEEEEETTEETT
T ss_pred CEEEEEE---CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444444 467666655 9999999999999874
No 130
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=34.94 E-value=29 Score=30.17 Aligned_cols=26 Identities=15% Similarity=0.296 Sum_probs=20.9
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....++|||+|.+.||+.|+
T Consensus 42 V~~~spA~~gL~~GD~I~~vng~~v~ 67 (95)
T 1mfg_A 42 VQPEGPASKLLQPGDKIIQANGYSFI 67 (95)
T ss_dssp ECTTSTTTTTCCTTCEEEEETTEECT
T ss_pred ECCCCchhhCCCCCCEEEEECCEEcC
Confidence 44676666679999999999998774
No 131
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=34.59 E-value=10 Score=33.75 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=19.7
Q ss_pred eccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
.+|.|... -++|||+|++.||+.|.
T Consensus 10 ~~~spA~~aGl~~GD~I~~ing~~v~ 35 (95)
T 3id1_A 10 AANSIAAEAQIAPGTELKAVDGIETP 35 (95)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECS
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 45655544 49999999999999875
No 132
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=34.33 E-value=9.4 Score=33.48 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=21.8
Q ss_pred CcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+-|..+ .+|.|...| ++|||+|.+.||+.|+
T Consensus 35 g~~V~~V---~~~spA~~aGl~~GD~I~~ing~~v~ 67 (97)
T 2w4f_A 35 GIFISRV---SEEGPAARAGVRVGDKLLEVNGVALQ 67 (97)
T ss_dssp SEEEEEE---CTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred CEEEEEE---CCCChHHHcCCCCCCEEEEECCEECC
Confidence 3444444 445554433 9999999999998764
No 133
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=34.06 E-value=1.2e+02 Score=34.60 Aligned_cols=61 Identities=5% Similarity=0.079 Sum_probs=43.4
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCC---CCCCeEEEEEE
Q psy3774 643 IELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGS---SEPPKLIIIKY 711 (963)
Q Consensus 643 ~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS---~~~Prli~l~Y 711 (963)
+.+.|+|++.|+---.....++...+.+++.|++++. |. .+.+++.=+|+ ...|.++..-+
T Consensus 17 ~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~-~~-------~~nv~a~~~g~~g~~~~~~v~l~aH 80 (490)
T 3mru_A 17 WQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRR-DP-------TGNVFIKKPATPGMENKKGVVLQAH 80 (490)
T ss_dssp HHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEE-CT-------TCCEEEEECCCTTCTTCCCEEEEEE
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEE-cC-------CCeEEEEEcCCCCCCCCCeEEEEec
Confidence 6778899999986666788899999999999999886 21 35677775654 23444444433
No 134
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=33.89 E-value=10 Score=33.43 Aligned_cols=27 Identities=19% Similarity=0.279 Sum_probs=20.7
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|.
T Consensus 39 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 66 (98)
T 2jxo_A 39 SVDPDSPAEASGLRAQDRIVEVNGVCME 66 (98)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 34466665555 9999999999998773
No 135
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=33.85 E-value=9.7 Score=33.43 Aligned_cols=27 Identities=19% Similarity=0.447 Sum_probs=21.1
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...| .+|||+|.+.||+.|+
T Consensus 36 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 63 (96)
T 2v90_A 36 EVDPGLPAKKAGMQAGDRLVAVAGESVE 63 (96)
T ss_dssp EECTTSHHHHTTCCTTEEEEEETTEECT
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECC
Confidence 34567666555 9999999999998773
No 136
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=33.82 E-value=12 Score=32.44 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=19.5
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|.-.| .+|||+|.+.||+.|+
T Consensus 35 ~~~spA~~aGL~~GD~I~~ing~~v~ 60 (91)
T 1g9o_A 35 EPGSPAEKAGLLAGDRLVEVNGENVE 60 (91)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCCHHHHCCCCCCCEEEEECCEECC
Confidence 456555444 9999999999999874
No 137
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=33.70 E-value=1.4e+02 Score=32.47 Aligned_cols=123 Identities=13% Similarity=0.066 Sum_probs=58.4
Q ss_pred HHHHHhccCCC-CCCCH--HHHHHHHHHhhhcCCCeEEEeCHHH--H--HHhcCCeEeeecCCCCCCCeEEEEEEccCCC
Q psy3774 147 ELTKNLGNLSA-NICTP--TYLENISKKLSFDYKMDIEIINREQ--M--QRLKMGSLLSVTHGSSEPPKLIIIKYMNGKF 219 (963)
Q Consensus 147 ~~aRdL~n~P~-N~ltP--~~~a~~a~~l~~~~gv~v~v~~~~~--l--~~~gm~~~laVg~gS~~~p~li~l~y~~~~~ 219 (963)
.+.+.|++.++ +.-+| ...+++..+.+++.|++|++-.-.. . .....+-+++.=+|+..++.++.-+|.--+.
T Consensus 31 ~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~Dsv~~ 110 (314)
T 3gux_A 31 QYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWDSRPY 110 (314)
T ss_dssp HHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECCCCC-
T ss_pred HHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEccccCCCc
Confidence 34445555543 33344 4566777777888899887532100 0 0001244555555654333333334432111
Q ss_pred CC-CcEEEcccceEEecCCCCCCCCCCccccccc-hhhHHHHHHHHHHHHhcCCCcEEEEEEEeeec
Q psy3774 220 KE-APIVLVGKGVTFDTGGISIKPSYSMDEMKYD-MCGAASILGTLYAISEMNLELNIIGVIVASEN 284 (963)
Q Consensus 220 ~~-~~i~lVGKGiTFDtGG~~lK~~~~M~~Mk~D-m~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN 284 (963)
.. .|.. +. || ++. .=-.| .+|.|+++.+++++.+.+++.+|+-+.-..|=
T Consensus 111 ~~~~p~~-~~-------~~---~~~----~GA~D~~sGva~~Le~ar~l~~~~~~~~i~fv~~~~EE 162 (314)
T 3gux_A 111 ADNDPDP-KN-------HH---TPI----LGVNDGASGVGVLLEIARQIQKEQPALGIDIVFFDSED 162 (314)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHHHHSCCSSEEEEEEECSCC
T ss_pred CCCCccc-cc-------CC---ccc----CCCcccHHHHHHHHHHHHHHHhCCCCCcEEEEEECCcc
Confidence 10 1100 00 11 111 11234 57999999999999998766666655555543
No 138
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=33.40 E-value=13 Score=32.27 Aligned_cols=27 Identities=11% Similarity=0.230 Sum_probs=20.3
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|.
T Consensus 33 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 60 (91)
T 2pkt_A 33 RVTPGSKAALANLCIGDVITAIDGENTS 60 (91)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 34566665443 9999999999998773
No 139
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=33.37 E-value=11 Score=32.47 Aligned_cols=26 Identities=19% Similarity=0.394 Sum_probs=19.4
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 34 V~~~spA~~aGl~~GD~I~~ing~~v~ 60 (88)
T 2uzc_A 34 LKDGGKAAQANVRIGDVVLSIDGINAQ 60 (88)
T ss_dssp ECTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred ECCCChHHHcCCCCCCEEEEECCEECC
Confidence 3456554444 9999999999998763
No 140
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=33.17 E-value=14 Score=32.78 Aligned_cols=26 Identities=23% Similarity=0.445 Sum_probs=21.3
Q ss_pred eeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
..+|.|....+++||+|.+.||+.|.
T Consensus 12 V~~~spA~~GL~~GD~Il~InG~~v~ 37 (94)
T 2kl1_A 12 VLPNMPAAGRLEAGDRIAAIDGQPIN 37 (94)
T ss_dssp CCTTSTTBTTBCTTCEEEEETTBCCC
T ss_pred ECCCChHHhCCCCCCEEEEECCEECC
Confidence 45677766679999999999998874
No 141
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=33.11 E-value=19 Score=30.61 Aligned_cols=26 Identities=8% Similarity=0.187 Sum_probs=20.0
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 30 V~~~spA~~aGl~~GD~I~~ing~~v~ 56 (83)
T 2kv8_A 30 VMRGSPADFVGLRAGDQILAVNEINVK 56 (83)
T ss_dssp CCTTSTTTTTTCCTTCEEEEETTEECS
T ss_pred eCCCChHHHcCCCCCCEEEEECCEECC
Confidence 3456666553 8999999999998874
No 142
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=33.01 E-value=12 Score=32.86 Aligned_cols=25 Identities=28% Similarity=0.474 Sum_probs=19.4
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|.
T Consensus 45 ~~~spA~~aGL~~GD~I~~ing~~v~ 70 (96)
T 2ego_A 45 HESSPAQLAGLTPGDTIASVNGLNVE 70 (96)
T ss_dssp CTTCHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCChHHHcCCCCCCEEEEECCEECC
Confidence 456555444 9999999999998874
No 143
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=33.00 E-value=1.1e+02 Score=33.07 Aligned_cols=107 Identities=8% Similarity=0.065 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhhcCCCeEEEeCH--HHH--HHhcCCeEeeecCCCCCCCeEEEEEEccCCCCC-CcEEEcccceEEecCC
Q psy3774 163 TYLENISKKLSFDYKMDIEIINR--EQM--QRLKMGSLLSVTHGSSEPPKLIIIKYMNGKFKE-APIVLVGKGVTFDTGG 237 (963)
Q Consensus 163 ~~~a~~a~~l~~~~gv~v~v~~~--~~l--~~~gm~~~laVg~gS~~~p~li~l~y~~~~~~~-~~i~lVGKGiTFDtGG 237 (963)
...+++..+.+++.|++|++-.- +.. .....+-+++.=+|+..++.++.-+|.--+... .|.. + + ||
T Consensus 48 ~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~Dsv~~~~~~p~~-~------~-~~ 119 (309)
T 3tc8_A 48 KACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWDSRPYSDHDPDP-S------K-HR 119 (309)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECCCCSCCTTCSSG-G------G-TT
T ss_pred HHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEecccCCCCCCCCccc-c------C-CC
Confidence 56677778888888998876321 000 000123455554555433333333443221110 1100 0 0 11
Q ss_pred CCCCCCCCccccccch-hhHHHHHHHHHHHHhcCCCcEEEEEEEeeec
Q psy3774 238 ISIKPSYSMDEMKYDM-CGAASILGTLYAISEMNLELNIIGVIVASEN 284 (963)
Q Consensus 238 ~~lK~~~~M~~Mk~Dm-~GaAaV~g~~~a~a~l~l~vnv~~~~~~~EN 284 (963)
.+=| --.|| +|.|+++.+++++.+.+++.+|+-+.-..|=
T Consensus 120 -~~~~------Ga~D~~sGva~~Le~ar~l~~~~~~~~i~f~~~~~EE 160 (309)
T 3tc8_A 120 -TPLD------GADDGGSGVGALLEIARQIGQKAPGIGIDIIFFDAED 160 (309)
T ss_dssp -SCCC------CTTTTHHHHHHHHHHHHHHHHSCCSSEEEEEEECSCS
T ss_pred -cccc------CcccchHhHHHHHHHHHHHHhCCCCCcEEEEEECccc
Confidence 0002 22354 6999999999999998877777666655554
No 144
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=32.98 E-value=13 Score=33.42 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=19.3
Q ss_pred eccCCC---C-CCCCCCCEEEccCCeEEe
Q psy3774 779 SENMLS---G-NSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~---g-~a~kPgDVits~~GkTVE 803 (963)
.++.|+ . ..++|||+|++.||+.|.
T Consensus 42 ~~~~pas~A~~aGl~~GDvI~~ing~~v~ 70 (105)
T 2i4s_A 42 SPGKDPVLFESIGLQDGDMAVALNGLDLT 70 (105)
T ss_dssp EECSCTHHHHHHTCCTTCEEEEETTEETT
T ss_pred ecCCCCCHHHHcCCCCCCEEEEECCEECC
Confidence 556655 2 249999999999999874
No 145
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=32.86 E-value=11 Score=32.55 Aligned_cols=27 Identities=15% Similarity=0.320 Sum_probs=21.3
Q ss_pred EeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
-..+|.|...| ++|||+|.+.||+.|+
T Consensus 36 ~V~~~spA~~aggl~~GD~I~~ing~~v~ 64 (90)
T 1qav_A 36 KIFKGLAADQTEALFVGDAILSVNGEDLS 64 (90)
T ss_dssp EECTTSHHHHTTCCCTTEEEEEETTEECT
T ss_pred EECCCCHHHhcCCCCCCCEEEEECCEECC
Confidence 34567776654 9999999999998874
No 146
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=32.28 E-value=11 Score=34.09 Aligned_cols=26 Identities=27% Similarity=0.483 Sum_probs=20.3
Q ss_pred eeccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
..+|.|... -++|||+|.+.||+.|.
T Consensus 42 V~~~spA~~aGl~~GD~I~~ing~~v~ 68 (112)
T 2p3w_A 42 VAPNSPSQRGGIQDGDIIVKVNGRPLV 68 (112)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred ECCCChHHHCCCCCCCEEEEECCEECC
Confidence 456666544 49999999999999874
No 147
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=32.18 E-value=11 Score=34.26 Aligned_cols=27 Identities=11% Similarity=0.357 Sum_probs=21.6
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
-..+|.|...+ ++|||+|++.||+.|.
T Consensus 41 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 68 (113)
T 2pzd_A 41 KVILGSPAHRAGLRPGDVILAIGEQMVQ 68 (113)
T ss_dssp EEBTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECC
Confidence 44567776666 9999999999998874
No 148
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=31.85 E-value=13 Score=32.19 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=18.1
Q ss_pred ccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
+|.|... .++|||+|.+.||+.|+
T Consensus 36 ~~spA~~aGl~~GD~I~~ing~~v~ 60 (89)
T 2q3g_A 36 PGGKAAQAGVAVGDWVLSIDGENAG 60 (89)
T ss_dssp TTSHHHHTTCCTTCEEEEETTEEGG
T ss_pred CCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444332 39999999999999875
No 149
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.85 E-value=8.8 Score=33.69 Aligned_cols=25 Identities=32% Similarity=0.648 Sum_probs=18.9
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 38 ~~~spA~~aGL~~GD~I~~ing~~v~ 63 (94)
T 1vb7_A 38 TERGKAEAADLRPGDIIVAINGQSAE 63 (94)
T ss_dssp CTTSSHHHHTCCTTCEEEEETTEECT
T ss_pred CCCCHHHHCCCCCCCEEEEECCEECC
Confidence 345554444 9999999999998874
No 150
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=31.69 E-value=31 Score=30.05 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=22.0
Q ss_pred EeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
-..+|.|....++|||+|.+.||+.|+
T Consensus 41 ~V~~~spA~~gL~~GD~I~~vng~~v~ 67 (95)
T 1mfg_A 41 RVQPEGPASKLLQPGDKIIQANGYSFI 67 (95)
T ss_dssp EECTTSTTTTTCCTTCEEEEETTEECT
T ss_pred EECCCCchhhCCCCCCEEEEECCEEcC
Confidence 455677776689999999999998774
No 151
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=31.59 E-value=14 Score=31.80 Aligned_cols=27 Identities=30% Similarity=0.599 Sum_probs=20.1
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 32 ~V~~~spA~~aGL~~GD~I~~ing~~v~ 59 (87)
T 2pa1_A 32 KVAERGKAKDADLRPGDIIVAINGESAE 59 (87)
T ss_dssp EECSSSHHHHTTCCTTCEEEEETTEEST
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECC
Confidence 34456555555 9999999999998763
No 152
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=31.17 E-value=14 Score=31.93 Aligned_cols=25 Identities=28% Similarity=0.591 Sum_probs=19.0
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+-||+.|+
T Consensus 31 ~~~s~A~~aG~l~~GD~I~~ing~~v~ 57 (92)
T 3cyy_A 31 SQDSLAARDGNIQEGDVVLKINGTVTE 57 (92)
T ss_dssp CTTCHHHHSCCCCTTCEEEEETTEECT
T ss_pred CCCChHHhcCCCCCCCEEEEECCEECC
Confidence 345554433 9999999999999884
No 153
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=31.12 E-value=13 Score=34.57 Aligned_cols=31 Identities=16% Similarity=0.469 Sum_probs=22.8
Q ss_pred cEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 770 LNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 770 vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
+-|..+ .+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 50 v~V~~V---~~~spA~~aG~l~~GD~I~~ing~~v~ 82 (124)
T 1wh1_A 50 IYISEI---DPNSIAAKDGRIREGDRIIQINGIEVQ 82 (124)
T ss_dssp EEEEEE---CSSSHHHHTCCCCTTCEEEEESSCBCC
T ss_pred EEEEEE---CCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 444444 456665555 9999999999999875
No 154
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=30.82 E-value=31 Score=30.72 Aligned_cols=26 Identities=12% Similarity=0.173 Sum_probs=20.6
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....++|||+|.+.||+.|+
T Consensus 46 V~~~spA~agl~~GD~I~~vng~~v~ 71 (107)
T 2h2b_A 46 VLKGGPAEGQLQENDRVAMVNGVSMD 71 (107)
T ss_dssp ECTTSTTBTTBCTTCEEEEETTEECT
T ss_pred ECCCCchhhCCCCCCEEEEECCEECC
Confidence 34566666569999999999998774
No 155
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=30.81 E-value=23 Score=33.40 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=22.5
Q ss_pred EEeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 279 IVASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 279 ~~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
....+|.|....+++||+|++.||+.|.
T Consensus 62 ~~V~~~spA~aGL~~GD~I~~inG~~v~ 89 (134)
T 2l97_A 62 RSVQSNMPANGHLEKYDVITKVDDKEIA 89 (134)
T ss_dssp EECSTTSGGGTTSCSSCEEEEETTEECC
T ss_pred EEECCCCchHHCCCCCCEEEEECCEEcC
Confidence 3456787766559999999999999874
No 156
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=30.72 E-value=28 Score=31.78 Aligned_cols=29 Identities=24% Similarity=0.299 Sum_probs=23.7
Q ss_pred EEEeeccCCCCCC---CCCCCEEEccCCeEEe
Q psy3774 775 VIVASENMLSGNS---TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 775 vi~~~ENm~~g~a---~kPgDVits~~GkTVE 803 (963)
|.-..+|.|...| ++|||+|.+.||+.|+
T Consensus 45 V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~ 76 (119)
T 2cs5_A 45 VSRVAPGTPADLCVPRLNEGDQVVLINGRDIA 76 (119)
T ss_dssp EEEECSSSTTTSSSSCCCTTCEEEEETTBCTT
T ss_pred EEEECCCCHHHHhhcCCCCCCEEEEECCEECC
Confidence 3445688888886 9999999999998775
No 157
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=30.68 E-value=12 Score=32.96 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=20.3
Q ss_pred EeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
-..+|.|...+ ++|||+|.+.||+.|.
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~ing~~v~ 71 (98)
T 1ihj_A 43 GIVPDSPAHLCGRLKVGDRILSLNGKDVR 71 (98)
T ss_dssp EECTTSHHHHHCSCCTTCEEEEETTEECT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 34456555444 9999999999998874
No 158
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.39 E-value=12 Score=33.13 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=22.4
Q ss_pred CcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+-|..+ .+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 37 gv~V~~V---~~~spA~~aGL~~GD~I~~ing~~v~ 69 (100)
T 2eeh_A 37 GIFVSKV---EEGSSAERAGLCVGDKITEVNGLSLE 69 (100)
T ss_dssp CEEEEEE---CTTSHHHHHTCCSSCEEEEETTEECS
T ss_pred CEEEEEE---CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444444 445554444 9999999999998874
No 159
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=29.92 E-value=93 Score=33.84 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=39.1
Q ss_pred HHHHHHHhccCCCCC--C---CHHHHHHHHHHhhhcCCCeEEEeCHHHHHHhcCCeEeeecCCCCCCCeEEEEEEc
Q psy3774 145 GIELTKNLGNLSANI--C---TPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSSEPPKLIIIKYM 215 (963)
Q Consensus 145 ~~~~aRdL~n~P~N~--l---tP~~~a~~a~~l~~~~gv~v~v~~~~~l~~~gm~~~laVg~gS~~~p~li~l~y~ 215 (963)
-+.+-|+|++.|+-. - .-...+++.++.++ |+++++..-. .+-+.+++ =+|+ |+.++.-+|.
T Consensus 11 ~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~----~~~~~~~a-~~g~--~~i~l~~H~D 77 (369)
T 2f7v_A 11 TLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHG----DGAVSLYA-VRGT--PKYLFNVHLD 77 (369)
T ss_dssp HHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECS----TTCEEEEE-EESC--CSEEEEEECC
T ss_pred HHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcC----CCceEEEE-EcCC--CeEEEEeeec
Confidence 467788899888632 2 33457778888777 8988775421 13456666 4566 5555555554
No 160
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=29.85 E-value=19 Score=32.14 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=19.6
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 36 V~~~spA~~aGL~~GD~I~~ing~~v~ 62 (103)
T 1v5l_A 36 ITPGSKAAAANLCPGDVILAIDGFGTE 62 (103)
T ss_dssp BCTTSTTGGGTCCTTCBEEEETTEECS
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456655533 8999999999998874
No 161
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=29.83 E-value=14 Score=33.56 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=21.7
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ .+|||+|.+.||+.|+
T Consensus 44 ~V~~~spA~~aGL~~GD~I~~ing~~v~ 71 (114)
T 2edz_A 44 VIEEGSPAEKAGLLDGDRVLRINGVFVD 71 (114)
T ss_dssp CCCTTCTTGGGTCCTTCEEEEESSSBCS
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECC
Confidence 44567777666 9999999999998763
No 162
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=29.74 E-value=1.3e+02 Score=32.74 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=26.3
Q ss_pred ccc-hhhhHHHHHHHHHHhcCCCcEEEEEEEeecc
Q psy3774 748 YDM-CGAASILGTLYAISEMNLELNIIGVIVASEN 781 (963)
Q Consensus 748 ~DM-~GAAaVlga~~aia~l~l~vnV~~vi~~~EN 781 (963)
.|| +|.|+++-+++++.+.+++.+|.-+.-..|=
T Consensus 128 ~D~~sGva~~Le~ar~l~~~~~~~~i~fv~~~~EE 162 (314)
T 3gux_A 128 NDGASGVGVLLEIARQIQKEQPALGIDIVFFDSED 162 (314)
T ss_dssp --CHHHHHHHHHHHHHHHHSCCSSEEEEEEECSCC
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCcEEEEEECCcc
Confidence 354 6889999999999998877787777777765
No 163
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=29.65 E-value=12 Score=33.20 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=20.4
Q ss_pred eeecCCCCC-CCCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGN-STKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~-a~~pgDVi~~~~G~tvE 306 (963)
..+|.|... .+++||+|++.||+.|.
T Consensus 9 V~~~spA~~aGl~~GD~I~~ing~~v~ 35 (95)
T 3id1_A 9 IAANSIAAEAQIAPGTELKAVDGIETP 35 (95)
T ss_dssp ECTTSHHHHTTCCTTCEEEEETTEECS
T ss_pred eCCCCHHHHcCCCCCCEEEEECCEECC
Confidence 456666554 49999999999999874
No 164
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.52 E-value=5.8 Score=37.07 Aligned_cols=81 Identities=21% Similarity=0.241 Sum_probs=0.0
Q ss_pred cCCCCCCCeEEEEEEccCCCCCCcEEEcccceEEecCCCCCCCC-----------CCccccccchhhHHHHHHHHHHHHh
Q psy3774 200 THGSSEPPKLIIIKYMNGKFKEAPIVLVGKGVTFDTGGISIKPS-----------YSMDEMKYDMCGAASILGTLYAISE 268 (963)
Q Consensus 200 g~gS~~~p~li~l~y~~~~~~~~~i~lVGKGiTFDtGG~~lK~~-----------~~M~~Mk~Dm~GaAaV~g~~~a~a~ 268 (963)
..||...||.|+|+-.+..= |++|.|. .....++...+| ....
T Consensus 2 ~~~~~~~~r~v~l~r~~~g~-----------------Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G---------~~~~ 55 (126)
T 2yuy_A 2 SSGSSGGPKTVTLKRTSQGF-----------------GFTLRHFIVYPPESAIQFSYKDEENGNRGG---------KQRN 55 (126)
T ss_dssp CCSCSSSCCCEEEECCSSSC-----------------SCCBCCCCCCCCSSCCCSCSSSCCCCSCCC---------TTSC
T ss_pred CCCCCCCCEEEEEEECCCCc-----------------ceeecCccccCCHHHHHHHHHhhcCcceec---------eeee
Q ss_pred cCCCcEEEEEEEeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 269 MNLELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 269 l~l~vnv~~~~~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.-.+-+-+-|.-..+|.|...+ ++|||+|.+.||+.|+
T Consensus 56 ~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~ 94 (126)
T 2yuy_A 56 RLEPMDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVI 94 (126)
T ss_dssp CCCCCCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECS
T ss_pred cccCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECC
No 165
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=29.36 E-value=4.3e+02 Score=26.17 Aligned_cols=127 Identities=9% Similarity=0.057 Sum_probs=72.4
Q ss_pred ceeEeeecccccccccccCCCEEEEEEecCCCccc-cccccC--chHHH----HHHHHc-CCCCCCCCCEEEEcccCCCC
Q psy3774 457 IMDFDIKLISSTTSIMSLKTDCLVVGIFKKNKLSS-IVKDID--KYGEI----TNILKS-GDLNEKLGSTLLLRNIQKIN 528 (963)
Q Consensus 457 ~M~f~i~~~~~~~~~~~~~~d~lVv~v~e~~~l~~-~~~~ld--~~g~l----~~~i~~-~~f~gk~ge~~~l~~~~~~~ 528 (963)
.|++++. ..+..+.+.|++|=+......... ....+. .+..+ .++++. + .-+.|+...... ...+
T Consensus 2 ~~~i~i~----~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~e~~~~~~~~g--~~~~G~a~iT~~-~~L~ 74 (184)
T 1spv_A 2 KTRIHVV----QGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQG--DCPTGHAVITLA-GDLP 74 (184)
T ss_dssp -CCEEEE----ESCGGGCCCSEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHHHHHHHC--SCCTTCEEEECC-TTSS
T ss_pred CCeEEEE----eCcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHhcC--CCCCCCEEEeeC-CCCC
Confidence 3567777 678888899999998766432211 111111 11222 222221 3 235678766543 3456
Q ss_pred ccEEEEEEcCCCCC----cCCHHHHHHHHHHHHHHHhhcCCceEEEecCCCcccccchHHHHHHHHHH
Q psy3774 529 AKRILLVNLGDKKK----KIKESNFIKIIQSIMNVFCNIGASNLLLMLPFNKIEKYNLSCLIIRTIII 592 (963)
Q Consensus 529 ~~~vllvGLG~~~~----~~~~~~~r~a~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg 592 (963)
.++|+=+ +|+ .- .-..+.++++...+.+.+.+.+++++++..-....-....+..++.+++.
T Consensus 75 ~k~VIH~-vgP-~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~ 140 (184)
T 1spv_A 75 AKAVVHT-VGP-VWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKT 140 (184)
T ss_dssp SSEEEEE-CCC-CCSSSSSSHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHH
T ss_pred CCEEEEE-cCC-cccCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHH
Confidence 6666543 444 21 12357789999999999999999999887644444444444444444443
No 166
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=29.33 E-value=30 Score=31.26 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=21.6
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 47 ~V~~~s~A~~aGL~~GD~Il~vng~~v~ 74 (114)
T 1x5n_A 47 HVKPGSLSAEVGLEIGDQIVEVNGVDFS 74 (114)
T ss_dssp EECTTSTTTTTTCCTTCEEEEETTEETT
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 34567777665 9999999999999874
No 167
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=29.14 E-value=27 Score=31.13 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=22.5
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 35 ~~~V~~V---~~~spA~~aG~L~~GD~Il~ing~~v~ 68 (103)
T 1uep_A 35 PILIGAV---IAMGSADRDGRLHPGDELVYVDGIPVA 68 (103)
T ss_dssp CCBEEEE---CTTSTTGGGTCCCTTCEEEEETTEECT
T ss_pred CeEEEEe---CCCChHHhCCCCCCCCEEEEECCEECC
Confidence 4444444 356555444 8999999999998775
No 168
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=29.04 E-value=14 Score=32.37 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=20.1
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 40 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 67 (97)
T 2w4f_A 40 RVSEEGPAARAGVRVGDKLLEVNGVALQ 67 (97)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECC
Confidence 34456665444 9999999999998763
No 169
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=28.87 E-value=13 Score=32.14 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=18.2
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 36 ~~~spA~~aGl~~GD~I~~ing~~v~ 61 (90)
T 2he4_A 36 DPGSPAARSGLRAQDRLIEVNGQNVE 61 (90)
T ss_dssp CTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred CCCChHHHCCCCCCCEEEEECCEECC
Confidence 345444333 9999999999998763
No 170
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=28.81 E-value=32 Score=30.50 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=24.0
Q ss_pred EEEEeeccCCCCC-C-CCCCCEEEccCCeEEe
Q psy3774 774 GVIVASENMLSGN-S-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 774 ~vi~~~ENm~~g~-a-~kPgDVits~~GkTVE 803 (963)
-|.-..+|.|... + .+|||+|.+.||+.|+
T Consensus 40 ~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~ 71 (101)
T 2yt7_A 40 VIANLLHGGPAERSGALSIGDRLTAINGTSLV 71 (101)
T ss_dssp EEEEECTTSTTGGGSSCCTTCEEEEESSCBCT
T ss_pred EEEEECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3445678888887 5 9999999999998764
No 171
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=28.66 E-value=17 Score=31.36 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=20.2
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ .+|||+|.+.||+.|+
T Consensus 34 V~~~spA~~aGL~~GD~I~~ing~~v~ 60 (91)
T 1g9o_A 34 VEPGSPAEKAGLLAGDRLVEVNGENVE 60 (91)
T ss_dssp ECTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHCCCCCCCEEEEECCEECC
Confidence 3456665555 9999999999999873
No 172
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=28.57 E-value=36 Score=28.28 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=14.9
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 40 l~~GD~I~~ing~~v~ 55 (81)
T 2rcz_A 40 IQEGDVVLKINGTVTE 55 (81)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 9999999999998875
No 173
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=28.41 E-value=17 Score=31.86 Aligned_cols=27 Identities=26% Similarity=0.416 Sum_probs=20.6
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|.
T Consensus 43 ~V~~~spA~~aGL~~GD~I~~ing~~v~ 70 (96)
T 2ego_A 43 RVHESSPAQLAGLTPGDTIASVNGLNVE 70 (96)
T ss_dssp EECTTCHHHHTTCCTTCEEEEETTEECT
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECC
Confidence 34456665555 9999999999998773
No 174
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=28.16 E-value=18 Score=31.93 Aligned_cols=26 Identities=19% Similarity=0.383 Sum_probs=19.4
Q ss_pred eeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
..+|.|...+ ++|||+|.+-||+.|.
T Consensus 38 V~~~spA~~aG~L~~GD~I~~Ing~~v~ 65 (96)
T 2qkv_A 38 LIQGQYPEIDSKLQRGDIITKFNGDALE 65 (96)
T ss_dssp ECTTSCHHHHHHCCTTCEEEEETTEECT
T ss_pred eCCCChHHhcCCCCCCCEEEEECCEECC
Confidence 3455554443 8999999999998775
No 175
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=27.90 E-value=15 Score=32.23 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=19.8
Q ss_pred EeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
-..+|.|...| ++|||+|.+.||+.|.
T Consensus 38 ~V~~~spA~~aG~l~~GD~I~~ing~~v~ 66 (97)
T 2jil_A 38 SVRPGGPADREGTIKPGDRLLSVDGIRLL 66 (97)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 33455555444 8999999999998764
No 176
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=27.84 E-value=14 Score=32.30 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=18.7
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 37 ~~~spA~~aG~L~~GD~I~~vng~~v~ 63 (95)
T 2vwr_A 37 LEGGLAAQDGRLSSNDRVLAINGHDLK 63 (95)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECC
Confidence 345554333 9999999999998875
No 177
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.79 E-value=14 Score=33.29 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=21.6
Q ss_pred cEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 770 LNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 770 vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
+-|..+ .+|.|.-.+ ++|||+|.+.||+.|+
T Consensus 48 ~~V~~V---~~~spA~~aGL~~GD~I~~ing~~v~ 79 (110)
T 1x5q_A 48 IFISRV---SEEGPAARAGVRVGDKLLEVNGVALQ 79 (110)
T ss_dssp EEEEEE---CTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred EEEEEE---CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 444444 355554444 9999999999998764
No 178
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=27.70 E-value=14 Score=33.49 Aligned_cols=27 Identities=26% Similarity=0.442 Sum_probs=20.9
Q ss_pred EeeecCCCCC-CCCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGN-STKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~-a~~pgDVi~~~~G~tvE 306 (963)
-..+|.|... .++|||+|++.||+.|.
T Consensus 41 ~V~~~spA~~aGl~~GD~I~~ing~~v~ 68 (112)
T 2p3w_A 41 EVAPNSPSQRGGIQDGDIIVKVNGRPLV 68 (112)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred EECCCChHHHCCCCCCCEEEEECCEECC
Confidence 3456766554 39999999999998874
No 179
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=27.68 E-value=20 Score=31.01 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=19.5
Q ss_pred eeecCCC---C-CCCCCCcEEEecCceEEE
Q psy3774 281 ASENMLS---G-NSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~---~-~a~~pgDVi~~~~G~tvE 306 (963)
..++.|+ . ..++|||+|++.||+.|.
T Consensus 23 V~~~~~~s~A~~aGl~~GD~I~~ing~~v~ 52 (87)
T 2i6v_A 23 VSPGKDPVLFESIGLQDGDMAVALNGLDLT 52 (87)
T ss_dssp EEECSCHHHHHHTTCCTTCEEEEETTEETT
T ss_pred EEeCCCCCHHHHCCCCCCCEEEEECCEECC
Confidence 3556665 2 349999999999999873
No 180
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.54 E-value=13 Score=32.95 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=22.4
Q ss_pred CcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...| ++|||+|.+.||+.|+
T Consensus 36 g~~V~~V---~~~spA~~aGL~~GD~I~~ing~~v~ 68 (101)
T 1uez_A 36 GIYVSLV---EPGSLAEKEGLRVGDQILRVNDKSLA 68 (101)
T ss_dssp CEEEEEE---CTTSHHHHHTCCSSCCEEEETTEECS
T ss_pred CEEEEEE---CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444444 355554444 9999999999999874
No 181
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=27.44 E-value=11 Score=32.77 Aligned_cols=24 Identities=8% Similarity=0.223 Sum_probs=18.0
Q ss_pred ccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
+|.|...+ ++|||+|.+.||+.|+
T Consensus 36 ~~spA~~aGl~~GD~I~~ing~~v~ 60 (91)
T 2vsp_A 36 KGGPADLAGLEDEDVIIEVNGVNVL 60 (91)
T ss_dssp TTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCChHHHcCCCCCCEEEEECCEECC
Confidence 34443333 8999999999999885
No 182
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=27.41 E-value=16 Score=31.57 Aligned_cols=26 Identities=27% Similarity=0.558 Sum_probs=19.5
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+-||+.|+
T Consensus 30 v~~~s~A~~aG~l~~GD~I~~ing~~v~ 57 (92)
T 3cyy_A 30 ISQDSLAARDGNIQEGDVVLKINGTVTE 57 (92)
T ss_dssp ECTTCHHHHSCCCCTTCEEEEETTEECT
T ss_pred ECCCChHHhcCCCCCCCEEEEECCEECC
Confidence 3455554444 8999999999998874
No 183
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=27.30 E-value=17 Score=31.33 Aligned_cols=27 Identities=15% Similarity=0.320 Sum_probs=21.7
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...| ++|||+|.+.||+.|+
T Consensus 36 ~V~~~spA~~aggl~~GD~I~~ing~~v~ 64 (90)
T 1qav_A 36 KIFKGLAADQTEALFVGDAILSVNGEDLS 64 (90)
T ss_dssp EECTTSHHHHTTCCCTTEEEEEETTEECT
T ss_pred EECCCCHHHhcCCCCCCCEEEEECCEECC
Confidence 44567777655 9999999999999874
No 184
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=27.30 E-value=14 Score=31.83 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=18.6
Q ss_pred eecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 35 ~~~spA~~aGl~~GD~I~~ing~~v~ 60 (89)
T 2q3g_A 35 TPGGKAAQAGVAVGDWVLSIDGENAG 60 (89)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEEGG
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 345544333 9999999999999874
No 185
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=27.25 E-value=18 Score=31.39 Aligned_cols=16 Identities=19% Similarity=0.497 Sum_probs=14.8
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 48 L~~GD~I~~vng~~v~ 63 (92)
T 2qg1_A 48 LMQGDQILMVNGEDVR 63 (92)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 9999999999998874
No 186
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.15 E-value=14 Score=34.19 Aligned_cols=27 Identities=15% Similarity=0.432 Sum_probs=21.5
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|++.||+.|+
T Consensus 54 ~V~~~spA~~aG~l~~GD~I~~ing~~v~ 82 (124)
T 1wh1_A 54 EIDPNSIAAKDGRIREGDRIIQINGIEVQ 82 (124)
T ss_dssp EECSSSHHHHTCCCCTTCEEEEESSCBCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 34567666666 9999999999999875
No 187
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.14 E-value=14 Score=32.80 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=19.8
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 43 V~~~spA~~aGL~~GD~I~~ing~~v~ 69 (100)
T 2eeh_A 43 VEEGSSAERAGLCVGDKITEVNGLSLE 69 (100)
T ss_dssp ECTTSHHHHHTCCSSCEEEEETTEECS
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456555444 9999999999998874
No 188
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=26.92 E-value=36 Score=30.25 Aligned_cols=27 Identities=11% Similarity=0.131 Sum_probs=21.3
Q ss_pred EeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
...+|.|....++|||+|.+.||+.|+
T Consensus 45 ~V~~~spA~agl~~GD~I~~vng~~v~ 71 (107)
T 2h2b_A 45 DVLKGGPAEGQLQENDRVAMVNGVSMD 71 (107)
T ss_dssp EECTTSTTBTTBCTTCEEEEETTEECT
T ss_pred EECCCCchhhCCCCCCEEEEECCEECC
Confidence 345677766569999999999998773
No 189
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=26.63 E-value=15 Score=32.50 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=19.0
Q ss_pred eeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 46 V~~~spA~~aG~l~~GD~I~~ing~~v~ 73 (103)
T 2fcf_A 46 VLEDSPAGKNGTLKPGDRIVEVDGMDLR 73 (103)
T ss_dssp ECSSSHHHHHCCCCTTCEEEEETTEECT
T ss_pred eCCCCcHHHcCCCCCCCEEEEECCEECC
Confidence 3445554333 9999999999998874
No 190
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=26.56 E-value=41 Score=30.55 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=23.4
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...+ ++|||+|.+.||+.|+
T Consensus 51 gv~V~~V---~~~spA~~aG~L~~GD~Il~vng~~v~ 84 (117)
T 2ehr_A 51 GIFIKQV---LEDSPAGKTNALKTGDKILEVSGVDLQ 84 (117)
T ss_dssp SEEEEEE---CSSSTTTSSCSCCTTCEEEEESSCBCT
T ss_pred CEEEEEe---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 4544444 457777665 8999999999998774
No 191
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=26.24 E-value=17 Score=31.97 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=20.6
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|.
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~ing~~v~ 71 (98)
T 1ihj_A 43 GIVPDSPAHLCGRLKVGDRILSLNGKDVR 71 (98)
T ss_dssp EECTTSHHHHHCSCCTTCEEEEETTEECT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 44566665554 9999999999999873
No 192
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=26.17 E-value=12 Score=34.46 Aligned_cols=29 Identities=10% Similarity=0.112 Sum_probs=22.8
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEeecC
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIEVLD 806 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVEV~N 806 (963)
..+|.|...| .+|||+|.+.||+.|++.+
T Consensus 46 V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s 75 (101)
T 3qik_A 46 VQRGSLAEVAGLQVGRKIYSINEDLVFLRP 75 (101)
T ss_dssp ECTTSHHHHHTCCTTCBEEEETTEESTTSC
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEEcCcCC
Confidence 4466665554 9999999999999997655
No 193
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=25.94 E-value=16 Score=34.91 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=22.3
Q ss_pred CcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...| ++|||+|.+.||+.|.
T Consensus 65 gv~V~~V---~~~spA~~aGL~~GD~I~~vng~~v~ 97 (139)
T 2vz5_A 65 GIYVTRV---SEGGPAEIAGLQIGDKIMQVNGWDMT 97 (139)
T ss_dssp CEEEEEE---CTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred CEEEEEE---CCCCHHHHCCCCCCCEEEEECCEEcC
Confidence 3444444 455555444 9999999999998774
No 194
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=25.82 E-value=16 Score=32.05 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=18.6
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 38 ~~~spA~~aG~l~~GD~I~~vng~~v~ 64 (98)
T 2opg_A 38 YEEGAACKDGRLWAGDQILEVNGIDLR 64 (98)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CCCChHHhCCCCCCCCEEEEECCEECC
Confidence 345554433 9999999999998764
No 195
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=25.77 E-value=14 Score=31.89 Aligned_cols=24 Identities=13% Similarity=0.322 Sum_probs=18.2
Q ss_pred eecCCCCCC-CCCCcEEEecCceEE
Q psy3774 282 SENMLSGNS-TKPGDIVVSMSGKTI 305 (963)
Q Consensus 282 ~EN~~~~~a-~~pgDVi~~~~G~tv 305 (963)
.+|.|...+ ++|||+|.+.||+.|
T Consensus 36 ~~~spA~~aGl~~GD~I~~ing~~v 60 (90)
T 2he4_A 36 DPGSPAARSGLRAQDRLIEVNGQNV 60 (90)
T ss_dssp CTTSHHHHHTCCTTCEEEEETTEEC
T ss_pred CCCChHHHCCCCCCCEEEEECCEEC
Confidence 445554444 899999999999876
No 196
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=25.71 E-value=23 Score=31.88 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=19.3
Q ss_pred eecCCC---C-CCCCCCcEEEecCceEEE
Q psy3774 282 SENMLS---G-NSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~---~-~a~~pgDVi~~~~G~tvE 306 (963)
.++.|+ . ..++|||+|++.||+.|.
T Consensus 42 ~~~~pas~A~~aGl~~GDvI~~ing~~v~ 70 (105)
T 2i4s_A 42 SPGKDPVLFESIGLQDGDMAVALNGLDLT 70 (105)
T ss_dssp EECSCTHHHHHHTCCTTCEEEEETTEETT
T ss_pred ecCCCCCHHHHcCCCCCCEEEEECCEECC
Confidence 566665 2 249999999999999773
No 197
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=25.62 E-value=1.9e+02 Score=31.21 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=28.3
Q ss_pred ccc-hhhhHHHHHHHHHHhcCCCcEEEEEEEeecc
Q psy3774 748 YDM-CGAASILGTLYAISEMNLELNIIGVIVASEN 781 (963)
Q Consensus 748 ~DM-~GAAaVlga~~aia~l~l~vnV~~vi~~~EN 781 (963)
.|| +|.|+++-+++++.+.+++.+|.-+.-.+|=
T Consensus 126 ~D~~sGva~~Le~ar~l~~~~~~~~i~f~~~~~EE 160 (309)
T 3tc8_A 126 DDGGSGVGALLEIARQIGQKAPGIGIDIIFFDAED 160 (309)
T ss_dssp TTTHHHHHHHHHHHHHHHHSCCSSEEEEEEECSCS
T ss_pred ccchHhHHHHHHHHHHHHhCCCCCcEEEEEECccc
Confidence 455 5999999999999999888888887777775
No 198
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=25.51 E-value=34 Score=30.30 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=30.8
Q ss_pred EEEeeecCCCCC-C-CCCCcEEEecCceEEEeecCCcccceeehhhhhhhhhcCC
Q psy3774 278 VIVASENMLSGN-S-TKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKP 330 (963)
Q Consensus 278 ~~~~~EN~~~~~-a-~~pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~~p 330 (963)
+--..+|.|... + .++||+|.+.||+.|+=.+ ..|+..+.++.++
T Consensus 41 V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~--------~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 41 IANLLHGGPAERSGALSIGDRLTAINGTSLVGLP--------LAACQAAVRETKS 87 (101)
T ss_dssp EEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSC--------HHHHHHHHHHTTT
T ss_pred EEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC--------HHHHHHHHHhCCC
Confidence 446678988887 5 8999999999998763111 3455555555433
No 199
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=25.35 E-value=27 Score=30.82 Aligned_cols=30 Identities=10% Similarity=0.253 Sum_probs=23.2
Q ss_pred cEEEEEEEeeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 770 LNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 770 vnV~~vi~~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
+.|..++|- +....++|||+|.+.||+.|+
T Consensus 34 v~V~~v~~~----a~~aGL~~GD~I~~vng~~v~ 63 (96)
T 1ujv_A 34 QRVKQILDI----QGCPGLCEGDLIVEINQQNVQ 63 (96)
T ss_dssp EEEEEESCG----GGSTTCCSSCEEEEETTEECS
T ss_pred EEEEEEecc----cccCCCCCCCEEEEECCEECC
Confidence 566777663 345679999999999998875
No 200
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=25.12 E-value=19 Score=31.09 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=18.3
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 35 ~~~spA~~aG~L~~GD~I~~ing~~v~ 61 (90)
T 2q9v_A 35 VPLGAADTDGRLRSGDELISVDGTPVI 61 (90)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECC
Confidence 345444322 9999999999999874
No 201
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=25.10 E-value=17 Score=30.99 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=18.0
Q ss_pred ccCCCCC-C-CCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGN-S-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~-a-~kPgDVits~~GkTVE 803 (963)
+|.|... . ++|||+|.+.||+.|+
T Consensus 34 ~~spA~~aG~l~~GD~I~~vng~~v~ 59 (85)
T 2i04_A 34 LDGPAALDGKMETGDVIVSVNDTCVL 59 (85)
T ss_dssp TTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CCChHHHcCCCCCCCEEEEECCEECC
Confidence 4444433 2 9999999999999875
No 202
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=24.85 E-value=23 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=20.3
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ .+|||+|.+-||+.|.
T Consensus 37 ~V~~~spA~~aG~L~~GD~I~~Ing~~v~ 65 (96)
T 2qkv_A 37 DLIQGQYPEIDSKLQRGDIITKFNGDALE 65 (96)
T ss_dssp EECTTSCHHHHHHCCTTCEEEEETTEECT
T ss_pred EeCCCChHHhcCCCCCCCEEEEECCEECC
Confidence 44556555554 8999999999998764
No 203
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=24.81 E-value=18 Score=32.01 Aligned_cols=25 Identities=8% Similarity=0.021 Sum_probs=18.8
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...| ++|||+|.+.||+.|+
T Consensus 42 ~~~spA~~aG~L~~GD~I~~vng~~v~ 68 (102)
T 2i1n_A 42 IPGGAAAMDGRLGVNDCVLRVNEVDVS 68 (102)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECS
T ss_pred CCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 345554433 9999999999998874
No 204
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=24.77 E-value=16 Score=31.96 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=20.2
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|.
T Consensus 38 ~V~~~spA~~aG~l~~GD~I~~ing~~v~ 66 (97)
T 2jil_A 38 SVRPGGPADREGTIKPGDRLLSVDGIRLL 66 (97)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 44556665554 8999999999998763
No 205
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=24.76 E-value=17 Score=31.51 Aligned_cols=16 Identities=13% Similarity=0.401 Sum_probs=14.6
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 52 l~~GD~I~~vng~~v~ 67 (94)
T 2fe5_A 52 LQIGDRLLAVNNTNLQ 67 (94)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 8999999999998774
No 206
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.74 E-value=15 Score=33.02 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=19.8
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 53 V~~~spA~~aGL~~GD~I~~ing~~v~ 79 (110)
T 1x5q_A 53 VSEEGPAARAGVRVGDKLLEVNGVALQ 79 (110)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456665544 9999999999998763
No 207
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=24.57 E-value=14 Score=32.46 Aligned_cols=26 Identities=31% Similarity=0.625 Sum_probs=19.6
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 37 V~~~spA~~aGL~~GD~I~~ing~~v~ 63 (94)
T 1vb7_A 37 VTERGKAEAADLRPGDIIVAINGQSAE 63 (94)
T ss_dssp BCTTSSHHHHTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHCCCCCCCEEEEECCEECC
Confidence 3455555444 8999999999998773
No 208
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=24.44 E-value=23 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=19.8
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 36 V~~~spA~~aGL~~GD~I~~ing~~v~ 62 (103)
T 1v5l_A 36 ITPGSKAAAANLCPGDVILAIDGFGTE 62 (103)
T ss_dssp BCTTSTTGGGTCCTTCBEEEETTEECS
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3456665543 8999999999998763
No 209
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=24.41 E-value=18 Score=31.89 Aligned_cols=25 Identities=12% Similarity=0.446 Sum_probs=19.1
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| +++||+|.+.||+.|+
T Consensus 42 ~~~spA~~aGl~~GD~I~~ing~~v~ 67 (99)
T 3khf_A 42 EDGSPAQEAGLRAGDLITHINGESVL 67 (99)
T ss_dssp CTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 445554333 9999999999999875
No 210
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.40 E-value=40 Score=30.71 Aligned_cols=29 Identities=24% Similarity=0.299 Sum_probs=23.9
Q ss_pred EEEeeecCCCCCC---CCCCcEEEecCceEEE
Q psy3774 278 VIVASENMLSGNS---TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 278 ~~~~~EN~~~~~a---~~pgDVi~~~~G~tvE 306 (963)
+.-..+|.|...| +++||+|.+.||+.|+
T Consensus 45 V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~ 76 (119)
T 2cs5_A 45 VSRVAPGTPADLCVPRLNEGDQVVLINGRDIA 76 (119)
T ss_dssp EEEECSSSTTTSSSSCCCTTCEEEEETTBCTT
T ss_pred EEEECCCCHHHHhhcCCCCCCEEEEECCEECC
Confidence 3456688888886 9999999999998764
No 211
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=24.18 E-value=50 Score=35.63 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=22.9
Q ss_pred EeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
-..+|.|...| +||||+|++.||+.|.
T Consensus 248 ~v~~~spA~~aGl~~GD~I~~ing~~v~ 275 (324)
T 1y8t_A 248 EVVAGGAAANAGVPKGVVVTKVDDRPIN 275 (324)
T ss_dssp EECTTSTTTTTTCCTTCEEEEETTEECC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECC
Confidence 34578888777 9999999999999875
No 212
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=24.11 E-value=29 Score=29.91 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=19.0
Q ss_pred eccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
.+|.|... .+++||+|.+.||+.|.
T Consensus 12 ~~~spA~~aGl~~GD~I~~ing~~v~ 37 (91)
T 2zpm_A 12 QPNSAASXAGLQAGDRIVXVDGQPLT 37 (91)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECC
T ss_pred CCCChHHhcCCCCCCEEEEECCeEcC
Confidence 34555443 49999999999998875
No 213
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=24.11 E-value=20 Score=32.54 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=19.5
Q ss_pred EeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 777 VASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 777 ~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
-..+|.|...| .+|||+|.+-||+.|+
T Consensus 31 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~ 59 (106)
T 2la8_A 31 DLIQGQYPEIDSKLQRGDIITKFNGDALE 59 (106)
T ss_dssp ECCTTSCHHHHTTCCTTCEEEEESSCBCS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 34455544433 8999999999999775
No 214
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=24.07 E-value=17 Score=32.25 Aligned_cols=27 Identities=30% Similarity=0.533 Sum_probs=20.0
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 45 ~V~~~spA~~aG~l~~GD~I~~ing~~v~ 73 (103)
T 2fcf_A 45 HVLEDSPAGKNGTLKPGDRIVEVDGMDLR 73 (103)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECT
T ss_pred EeCCCCcHHHcCCCCCCCEEEEECCEECC
Confidence 34456555444 9999999999998773
No 215
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.04 E-value=15 Score=32.54 Aligned_cols=25 Identities=16% Similarity=0.372 Sum_probs=19.4
Q ss_pred eecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 43 ~~~spA~~aGL~~GD~I~~ing~~v~ 68 (101)
T 1uez_A 43 EPGSLAEKEGLRVGDQILRVNDKSLA 68 (101)
T ss_dssp CTTSHHHHHTCCSSCCEEEETTEECS
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 456555444 9999999999999774
No 216
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.03 E-value=38 Score=30.08 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=20.1
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 41 V~~~spA~~aG~L~~GD~Il~ing~~v~ 68 (103)
T 1uep_A 41 VIAMGSADRDGRLHPGDELVYVDGIPVA 68 (103)
T ss_dssp ECTTSTTGGGTCCCTTCEEEEETTEECT
T ss_pred eCCCChHHhCCCCCCCCEEEEECCEECC
Confidence 3466666554 8999999999998764
No 217
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=23.89 E-value=16 Score=32.70 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=18.7
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...| .+|||+|.+.||+.|.
T Consensus 34 ~~~spA~~aGl~~GD~I~~ing~~v~ 59 (106)
T 3ngh_A 34 EEGSPAEKAGLLDGDRVLRINGVFVD 59 (106)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECC
Confidence 345554334 9999999999998874
No 218
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=23.74 E-value=18 Score=32.50 Aligned_cols=32 Identities=13% Similarity=0.237 Sum_probs=22.3
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...+ ++|||+|.+-||+.|+
T Consensus 40 g~~V~~V---~~~spA~~aG~l~~GD~I~~ing~~v~ 73 (111)
T 2koj_A 40 PIYVKNI---LPRGAAIQDGRLKAGDRLIEVNGVDLA 73 (111)
T ss_dssp CEEEEEE---CSSSHHHHHCSSCTTCEEEEETTEECT
T ss_pred CEEEEEE---CCCChHHHCCCCCCCCEEEEECCEECC
Confidence 3444444 345555444 8999999999998874
No 219
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=23.67 E-value=35 Score=30.22 Aligned_cols=26 Identities=15% Similarity=0.296 Sum_probs=20.6
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....++|||+|.+.||+.|+
T Consensus 50 V~~~spA~~gL~~GD~I~~vng~~v~ 75 (103)
T 1n7t_A 50 VQPEGPASKLLQPGDKIIQANGYSFI 75 (103)
T ss_dssp BSSSSTTSSSCCTTCEEEEETTEECS
T ss_pred ECCCCchHHCCCCCCEEEEECCEECC
Confidence 34566665579999999999998774
No 220
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.48 E-value=19 Score=33.37 Aligned_cols=23 Identities=17% Similarity=0.455 Sum_probs=19.0
Q ss_pred cCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 781 NMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 781 Nm~~g~a-~kPgDVits~~GkTVE 803 (963)
|.|...| ++|||+|.+.||+.|+
T Consensus 56 ~spA~~aGL~~GD~Il~Vng~~v~ 79 (118)
T 2yub_A 56 ISPNNRNAIHPGDRILEINGTPVR 79 (118)
T ss_dssp SCTTHHHHCCTTCCEEEESSSBTT
T ss_pred CChHHHcCCCCCCEEEEECCEECC
Confidence 6666665 9999999999998764
No 221
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=23.48 E-value=20 Score=31.28 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=19.9
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 35 ~V~~~spA~~aG~L~~GD~I~~vng~~v~ 63 (95)
T 2vwr_A 35 DLLEGGLAAQDGRLSSNDRVLAINGHDLK 63 (95)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECC
Confidence 34455555443 8999999999998764
No 222
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=23.46 E-value=20 Score=32.97 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=18.4
Q ss_pred ccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
+|.|... .++|||+|.+-||+.|+
T Consensus 53 ~gspA~~AGL~~GD~Il~VnG~~v~ 77 (109)
T 2vsv_A 53 PYCSASVAGAREGDYIVSIQLVDCK 77 (109)
T ss_dssp TTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444333 39999999999999876
No 223
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=23.35 E-value=48 Score=35.75 Aligned_cols=28 Identities=18% Similarity=0.213 Sum_probs=23.5
Q ss_pred EEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 776 IVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 776 i~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.-..+|.|...| +||||+|++.||+.|.
T Consensus 249 ~~V~~~spA~~aGL~~GD~I~~ing~~v~ 277 (318)
T 1te0_A 249 NEVSPDGPAANAGIQVNDLIISVDNKPAI 277 (318)
T ss_dssp EEECTTSTTTTTCCCTTCCEEEETTEECC
T ss_pred EEeCCCChHHHCCCCCCCEEEEECCEEcC
Confidence 345688888777 9999999999999874
No 224
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.21 E-value=14 Score=32.88 Aligned_cols=26 Identities=19% Similarity=0.321 Sum_probs=20.2
Q ss_pred eeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+.||+.|+
T Consensus 42 V~~~spA~~agGL~~GD~I~~ing~~v~ 69 (100)
T 2edp_A 42 IEDGGKAALSQKMRTGDELVNINGTPLY 69 (100)
T ss_dssp CCTTSHHHHHTSCCTTCEEEEETTEECC
T ss_pred ECCCCHHHHcCCCCCCCEEEEECCEEcc
Confidence 3456665555 9999999999999873
No 225
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.07 E-value=18 Score=33.41 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=23.7
Q ss_pred CCcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 768 LELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 768 l~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.++-|..+ .+|.|.-.| ++|||+|.+.||+.|+
T Consensus 45 ~~~~V~~V---~~~spA~~aG~L~~GD~I~~ing~~v~ 79 (122)
T 1v5q_A 45 SPPLISYI---EADSPAERCGVLQIGDRVMAINGIPTE 79 (122)
T ss_dssp SCCEEEEE---CTTSHHHHSCCCCTTCCEEEETTEESS
T ss_pred CCcEEEEE---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 35555554 456665555 8999999999998775
No 226
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=22.87 E-value=48 Score=28.37 Aligned_cols=38 Identities=18% Similarity=0.431 Sum_probs=28.8
Q ss_pred EEEEEEEeeccCCCC--CCCCCCCEEEccCCeEEeecCCCcc-cceeh
Q psy3774 771 NIIGVIVASENMLSG--NSTKPGDIVVSMSGKTIEVLDTDAE-GRLIL 815 (963)
Q Consensus 771 nV~~vi~~~ENm~~g--~a~kPgDVits~~GkTVEV~NTDAE-GRLvL 815 (963)
++-|+++..| +... ..+++||.|+ +.|.+.|.+ ||+-|
T Consensus 28 ~~~Gllh~se-l~~~~~~~~~~Gd~V~------v~V~~vd~~~~~i~l 68 (80)
T 2k52_A 28 QVRGLLRPRD-MISLRLENLNVGDEII------VQAIDVRPEKREIDF 68 (80)
T ss_dssp TEEEEECGGG-CSSCCGGGCCTTCEEE------EEEEEEETTTTEEEE
T ss_pred CCEEEEEHHH-CCcccceeeCCCCEEE------EEEEEEECCCCEEEE
Confidence 3568888888 3322 3799999986 788888887 99776
No 227
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.87 E-value=30 Score=30.47 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=20.9
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|.-.-++|||+|.+.||+.|+
T Consensus 38 V~~~spA~agL~~GD~Il~ing~~v~ 63 (96)
T 2edv_A 38 VTAGGSAHGKLFPGDQILQMNNEPAE 63 (96)
T ss_dssp BCSSSSSTTTSCTTCBEEEESSCBST
T ss_pred ECCCCchhhCCCCCCEEEEECCEECC
Confidence 45677765669999999999998774
No 228
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=22.86 E-value=21 Score=30.75 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=19.0
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 34 V~~~spA~~aG~L~~GD~I~~ing~~v~ 61 (90)
T 2q9v_A 34 IVPLGAADTDGRLRSGDELISVDGTPVI 61 (90)
T ss_dssp ECTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred ECCCChHHHCCCCCCCCEEEEECCEECC
Confidence 3455554332 8999999999999774
No 229
>1v1h_A Fibritin, fiber protein; chimera; 1.9A {Human adenovirus type 2} SCOP: b.83.1.1 h.1.17.1 PDB: 1v1i_A
Probab=22.65 E-value=23 Score=32.62 Aligned_cols=27 Identities=26% Similarity=0.662 Sum_probs=13.5
Q ss_pred cccceEEecCC-CCCCCCCCccccccchhhH
Q psy3774 227 VGKGVTFDTGG-ISIKPSYSMDEMKYDMCGA 256 (963)
Q Consensus 227 VGKGiTFDtGG-~~lK~~~~M~~Mk~Dm~Ga 256 (963)
+|.|+-+|.+| +++|-+ ...++|..|+
T Consensus 43 iG~GL~~~~n~~i~VKLG---~GLsFDs~G~ 70 (103)
T 1v1h_A 43 IGSGIDYNENGAMITKLG---AGLSFDNSGA 70 (103)
T ss_dssp BCTTEEECTTSCEEECBC---TTCEECTTSC
T ss_pred ecccccccCCccEEEeec---CCeeEcCCCC
Confidence 44444444433 555555 3455565553
No 230
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=22.49 E-value=55 Score=27.07 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=14.8
Q ss_pred CCCCcEEEecCceEEE
Q psy3774 291 TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 291 ~~pgDVi~~~~G~tvE 306 (963)
++|||+|.+.||+.|+
T Consensus 40 l~~GD~I~~ing~~v~ 55 (81)
T 2rcz_A 40 IQEGDVVLKINGTVTE 55 (81)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 9999999999998874
No 231
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=22.39 E-value=29 Score=29.44 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=21.5
Q ss_pred CcEEEEEEEeeccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
++-|..+. +|.|... .++|||+|.+.||+.|+
T Consensus 26 ~v~V~~V~---~~spA~~aGl~~GD~I~~vng~~v~ 58 (85)
T 1rgw_A 26 PLTISRIT---PGSKAAQSQLSQGDLVVAIDGVNTD 58 (85)
T ss_dssp CCBEEEEC---TTSHHHHSSCCCCSBEEEETTEECT
T ss_pred CeEEEEEC---CCCHHHHcCCCCCCEEEEECCEECC
Confidence 45555553 3433322 39999999999998774
No 232
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=22.36 E-value=45 Score=30.25 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=21.6
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
-..+|.|...+ +++||+|...||+.|+
T Consensus 56 ~V~~~spA~~aG~L~~GD~Il~vng~~v~ 84 (117)
T 2ehr_A 56 QVLEDSPAGKTNALKTGDKILEVSGVDLQ 84 (117)
T ss_dssp EECSSSTTTSSCSCCTTCEEEEESSCBCT
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECC
Confidence 45567777775 8999999999998764
No 233
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=22.35 E-value=21 Score=31.71 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=19.2
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|...| .+|||+|.+.||+.|+
T Consensus 52 V~~~spA~~aGl~~GD~I~~ing~~v~ 78 (104)
T 3sfj_A 52 VSEGGPAEIAGLQIGDKIMQVNGWDMT 78 (104)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred ECCCChHHHcCCCCCCEEEEECCEECC
Confidence 3455554332 9999999999998874
No 234
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=22.33 E-value=18 Score=30.78 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=17.7
Q ss_pred ecCCCCC-CCCCCcEEEecCceEEE
Q psy3774 283 ENMLSGN-STKPGDIVVSMSGKTIE 306 (963)
Q Consensus 283 EN~~~~~-a~~pgDVi~~~~G~tvE 306 (963)
+|.|... .++|||+|.+.||+.|+
T Consensus 34 ~~spA~~aGl~~GD~I~~vng~~v~ 58 (85)
T 1rgw_A 34 PGSKAAQSQLSQGDLVVAIDGVNTD 58 (85)
T ss_dssp TTSHHHHSSCCCCSBEEEETTEECT
T ss_pred CCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444422 39999999999998764
No 235
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=22.00 E-value=22 Score=33.88 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=20.4
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
-..+|.|...| ++|||+|.+.||+.|.
T Consensus 70 ~V~~~spA~~aGL~~GD~I~~vng~~v~ 97 (139)
T 2vz5_A 70 RVSEGGPAEIAGLQIGDKIMQVNGWDMT 97 (139)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEEcC
Confidence 34456665554 9999999999998764
No 236
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=21.98 E-value=21 Score=32.98 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=19.3
Q ss_pred eeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
..+|.|.-.+ ++|||+|.+.||+.|.
T Consensus 40 V~~~spA~~aGl~~GD~I~~ing~~v~ 66 (128)
T 2kjd_A 40 VDPDSPAEASGLRAQDRIVEVNGVCME 66 (128)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred eCCCChHHHcCCCCCCEEEEECCEECC
Confidence 3455554444 9999999999998774
No 237
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=21.84 E-value=22 Score=30.99 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=21.7
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+-|..+ .+|.|...| ++|||+|.+-||+.|+
T Consensus 34 g~~V~~V---~~~spA~~aG~l~~GD~I~~vng~~v~ 67 (96)
T 1d5g_A 34 GIYVKAV---IPQGAAESDGRIHKGDRVLAVNGVSLE 67 (96)
T ss_dssp CCEEEEE---CTTSHHHHTTCCCTTCEEEEETTEECT
T ss_pred CEEEEEe---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 3444444 345444333 9999999999998875
No 238
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=21.79 E-value=61 Score=31.89 Aligned_cols=26 Identities=15% Similarity=0.296 Sum_probs=21.6
Q ss_pred eeccCCCCCCCCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNSTKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a~kPgDVits~~GkTVE 803 (963)
..+|.|....+||||+|.+.||+.|+
T Consensus 31 v~~~spA~~gl~~GD~I~~vng~~v~ 56 (195)
T 2qbw_A 31 VQPEGPASKLLQPGDKIIQANGYSFI 56 (195)
T ss_dssp ECTTSTTTTTCCTTCEEEEETTEECT
T ss_pred ECCCChHHhCCCCCCEEEEECCEECC
Confidence 35777777789999999999999774
No 239
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=21.73 E-value=15 Score=31.96 Aligned_cols=25 Identities=8% Similarity=0.217 Sum_probs=18.7
Q ss_pred eecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 35 ~~~spA~~aGl~~GD~I~~ing~~v~ 60 (91)
T 2vsp_A 35 QKGGPADLAGLEDEDVIIEVNGVNVL 60 (91)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred CCCChHHHcCCCCCCEEEEECCEECC
Confidence 344444334 8999999999999874
No 240
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=21.73 E-value=19 Score=31.66 Aligned_cols=26 Identities=12% Similarity=0.431 Sum_probs=19.7
Q ss_pred eeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
..+|.|...| .++||+|.+.||+.|+
T Consensus 41 V~~~spA~~aGl~~GD~I~~ing~~v~ 67 (99)
T 3khf_A 41 VEDGSPAQEAGLRAGDLITHINGESVL 67 (99)
T ss_dssp ECTTSHHHHHTCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCEEEEECCEECC
Confidence 3455554444 9999999999999875
No 241
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=21.56 E-value=36 Score=30.10 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=21.4
Q ss_pred EeeecCCCCCCCCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNSTKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a~~pgDVi~~~~G~tvE 306 (963)
-..+|.|....++|||+|.+-||+.|+
T Consensus 49 ~V~~~spA~~gL~~GD~I~~vng~~v~ 75 (103)
T 1n7t_A 49 RVQPEGPASKLLQPGDKIIQANGYSFI 75 (103)
T ss_dssp CBSSSSTTSSSCCTTCEEEEETTEECS
T ss_pred EECCCCchHHCCCCCCEEEEECCEECC
Confidence 345676666689999999999998764
No 242
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=21.55 E-value=19 Score=30.60 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=18.6
Q ss_pred eecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 282 SENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 282 ~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 33 ~~~spA~~aG~l~~GD~I~~vng~~v~ 59 (85)
T 2i04_A 33 VLDGPAALDGKMETGDVIVSVNDTCVL 59 (85)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 345554332 8999999999999874
No 243
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=21.51 E-value=21 Score=31.65 Aligned_cols=27 Identities=7% Similarity=-0.011 Sum_probs=19.7
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ ++|||+|.+.||+.|+
T Consensus 40 ~V~~~spA~~aG~L~~GD~I~~vng~~v~ 68 (102)
T 2i1n_A 40 KIIPGGAAAMDGRLGVNDCVLRVNEVDVS 68 (102)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 33455554443 8999999999998874
No 244
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=21.50 E-value=23 Score=30.99 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=19.2
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ ++|||+|.+.||+.|+
T Consensus 37 V~~~spA~~aG~l~~GD~I~~vng~~v~ 64 (98)
T 2opg_A 37 VYEEGAACKDGRLWAGDQILEVNGIDLR 64 (98)
T ss_dssp ECTTSHHHHHCCCCTTCEEEEETTEECT
T ss_pred ECCCChHHhCCCCCCCCEEEEECCEECC
Confidence 3455555433 9999999999998763
No 245
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=21.49 E-value=22 Score=33.10 Aligned_cols=31 Identities=32% Similarity=0.523 Sum_probs=21.0
Q ss_pred cEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 770 LNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 770 vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
+-|..+ .+|.|...| ++|||+|.+.||+.|+
T Consensus 61 v~V~~V---~~~spA~~aG~L~~GD~Il~Vng~~v~ 93 (123)
T 2iwq_A 61 IFIKHV---LEDSPAGKNGTLKPGDRIVEVDGMDLR 93 (123)
T ss_dssp EEEEEE---CSSSHHHHHCCCCTTCEEEEETTEECT
T ss_pred EEEEEE---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 444444 344444332 9999999999998775
No 246
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=21.49 E-value=9.4 Score=35.11 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=23.3
Q ss_pred EeeecCCCCCC-CCCCcEEEecCceEEEeec
Q psy3774 280 VASENMLSGNS-TKPGDIVVSMSGKTIEVLD 309 (963)
Q Consensus 280 ~~~EN~~~~~a-~~pgDVi~~~~G~tvEi~N 309 (963)
...+|+|...| .+|||+|.+-||+.|++.+
T Consensus 45 ~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s 75 (101)
T 3qik_A 45 SVQRGSLAEVAGLQVGRKIYSINEDLVFLRP 75 (101)
T ss_dssp EECTTSHHHHHTCCTTCBEEEETTEESTTSC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEEcCcCC
Confidence 34566666554 8999999999999996555
No 247
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.45 E-value=29 Score=30.24 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=17.8
Q ss_pred ccCCCCC-CCCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGN-STKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~-a~kPgDVits~~GkTVE 803 (963)
+|.|... -++|||+|.+.||+.|+
T Consensus 41 ~~spA~~aGl~~GD~I~~ing~~v~ 65 (94)
T 2eeg_A 41 AGSKAALAALCPGDLIQAINGESTE 65 (94)
T ss_dssp SSSHHHHTTCCTTCEEEEETTEETT
T ss_pred CCCHHHHcCCCCCCEEEEECCEECC
Confidence 4444332 39999999999998774
No 248
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=21.43 E-value=32 Score=29.57 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=14.5
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 50 l~~GD~I~~vng~~v~ 65 (91)
T 1m5z_A 50 LKPYDRLLQVNHVRTR 65 (91)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 8999999999998764
No 249
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=21.28 E-value=15 Score=32.74 Aligned_cols=25 Identities=20% Similarity=0.425 Sum_probs=19.2
Q ss_pred eccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 56 ~~~spA~~aGl~~GD~I~~vng~~v~ 81 (104)
T 2z17_A 56 QEDSPAHCAGLQAGDVLANINGVSTE 81 (104)
T ss_dssp CTTSHHHHHTCCTTCBCCEETTEECT
T ss_pred CCCChHHHcCCCCCCEEEEECCEEcC
Confidence 455554444 9999999999998775
No 250
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=21.23 E-value=20 Score=31.10 Aligned_cols=16 Identities=13% Similarity=0.401 Sum_probs=14.5
Q ss_pred CCCCcEEEecCceEEE
Q psy3774 291 TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 291 ~~pgDVi~~~~G~tvE 306 (963)
++|||+|.+.||+.|+
T Consensus 52 l~~GD~I~~vng~~v~ 67 (94)
T 2fe5_A 52 LQIGDRLLAVNNTNLQ 67 (94)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 8999999999998774
No 251
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.17 E-value=20 Score=33.31 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=22.7
Q ss_pred CCcEEEEEEEeeccCCCCCC-CCCCCEEEccCCeEEe
Q psy3774 768 LELNIIGVIVASENMLSGNS-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 768 l~vnV~~vi~~~ENm~~g~a-~kPgDVits~~GkTVE 803 (963)
.++-|..+ .+|.|...| ++|||+|.+.||+.|+
T Consensus 46 ~gv~V~~V---~~~spA~~aGL~~GD~I~~vng~~v~ 79 (128)
T 1uf1_A 46 LGIYITGV---DPGSEAEGSGLKVGDQILEVNGRSFL 79 (128)
T ss_dssp CCCEEEEE---CTTCHHHHHTCCTTCEEEEETTEECS
T ss_pred CCEEEEEE---CCCCHHHHCCCCCCCEEEEECCEECC
Confidence 35555554 345554334 9999999999998764
No 252
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=21.11 E-value=23 Score=31.67 Aligned_cols=16 Identities=19% Similarity=0.430 Sum_probs=14.7
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 52 L~~GD~I~~vng~~v~ 67 (105)
T 2awx_A 52 LQIGDKLLAVNSVSLE 67 (105)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 9999999999998875
No 253
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=20.86 E-value=28 Score=31.58 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=21.6
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...+ ++|||+|.+.||+.|+
T Consensus 50 gv~V~~V---~~~spA~~aG~L~~GD~Il~Vng~~v~ 83 (112)
T 2r4h_A 50 DLYVLRL---AEDGPAERSGKMRIGDEILEINGETTK 83 (112)
T ss_dssp CEEEEEE---CTTSHHHHTTCCCTTCEEEEETTEECT
T ss_pred CEEEEEE---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 4444443 345444433 8999999999998875
No 254
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=20.83 E-value=2.4e+02 Score=31.03 Aligned_cols=63 Identities=10% Similarity=0.190 Sum_probs=50.0
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHHhhhhCCCeEEEeCHHHHHhcCCCeEeeecCCCC-CCCeEEEEEE
Q psy3774 641 KGIELTKNLGNLSANICTPTYLENISKKLSFDYKMDIEIINREQMQRLKMGSLLSVTHGSS-EPPKLIIIKY 711 (963)
Q Consensus 641 ~g~~~aRdL~n~P~N~ltP~~la~~a~~l~~~~g~~v~V~d~~~l~~~gmg~~laVg~GS~-~~Prli~l~Y 711 (963)
+-+.+-++|++.|+---.-..+++..++.++++|.++++ | .+|.+++.=+|.. ..|+++..-+
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~-D-------~~GNli~~~~g~~~~~~~v~l~aH 67 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVT-D-------GLGGIFGIKHSEAVDAPRVLVASH 67 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEE-C-------TTSCEEEEECCCSTTCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEE-C-------CCCeEEEEECCcCCCCCeEEEEec
Confidence 346789999999997777789999999999999998886 2 4788888867765 5677765544
No 255
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=20.79 E-value=17 Score=32.57 Aligned_cols=16 Identities=13% Similarity=0.453 Sum_probs=14.8
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
++|||+|.+.||+.|+
T Consensus 63 l~~GD~I~~vng~~v~ 78 (108)
T 2jre_A 63 IEPNDKILRVDDVNVQ 78 (108)
T ss_dssp CCSSEEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 9999999999998875
No 256
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.75 E-value=16 Score=32.57 Aligned_cols=26 Identities=19% Similarity=0.333 Sum_probs=20.5
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTI 305 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tv 305 (963)
...+|.|...| ++|||+|.+.||+.|
T Consensus 41 ~V~~~spA~~agGL~~GD~I~~ing~~v 68 (100)
T 2edp_A 41 KIEDGGKAALSQKMRTGDELVNINGTPL 68 (100)
T ss_dssp CCCTTSHHHHHTSCCTTCEEEEETTEEC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEc
Confidence 34466666665 999999999999987
No 257
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.71 E-value=27 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=18.8
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 50 ~~~spA~~aG~L~~GD~I~~vng~~v~ 76 (108)
T 1q7x_A 50 IPQGAAESDGRIHKGDRVLAVNGVSLE 76 (108)
T ss_dssp CTTSTHHHHTCCCSSCEEEEETTEECB
T ss_pred CCCChHHHCCCCCCCCEEEEECCEECC
Confidence 345444333 9999999999998886
No 258
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=20.69 E-value=42 Score=30.99 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=41.0
Q ss_pred HHHHHHhcCCC-cEEEEEEEeeccCCCCCCCCCCCEEEccCCeEEeecCCCcccceehhhhhhhhhhcCCcEEEEecchh
Q psy3774 759 TLYAISEMNLE-LNIIGVIVASENMLSGNSTKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERFKPSVVIDIATLT 837 (963)
Q Consensus 759 a~~aia~l~l~-vnV~~vi~~~ENm~~g~a~kPgDVits~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLT 837 (963)
++.++.++.++ ++|+- --.+-.+.-...+|||+|.-..|..|- |.||++=. ...||=+.||
T Consensus 2 al~~L~~l~p~~a~v~r--~g~~~~i~~~~l~~GDiv~v~~G~~iP-----aDg~v~~g-----------~~~vdeS~LT 63 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIR--DGKEIAVPVEEVAVGDIVIVRPGEKIP-----VDGVVVEG-----------ESYVDESMIS 63 (113)
T ss_dssp HHHHHHHHSCSEEEEEE--TTEEEEEEGGGCCTTCEEEECTTCBCC-----SEEEEEEC-----------CEEEECHHHH
T ss_pred HHHHHhcCCCCEEEEEE--CCEEEEEEHHHCCCCCEEEECCCCEEe-----eeEEEEEc-----------eEEEEccccC
Confidence 45666676665 44431 111223556789999999999886654 44665521 3688999999
Q ss_pred HHH
Q psy3774 838 GAC 840 (963)
Q Consensus 838 GA~ 840 (963)
|--
T Consensus 64 GEs 66 (113)
T 2hc8_A 64 GEP 66 (113)
T ss_dssp CCS
T ss_pred CCC
Confidence 853
No 259
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=20.65 E-value=17 Score=31.48 Aligned_cols=26 Identities=12% Similarity=0.313 Sum_probs=19.0
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
..+|.|...+ .+|||+|.+.||+.|+
T Consensus 36 V~~~spA~~aG~L~~GD~I~~vng~~v~ 63 (92)
T 2qg1_A 36 IVKGGIADADGRLMQGDQILMVNGEDVR 63 (92)
T ss_dssp ECTTSHHHHHTCCCTTCEEEEETTEECT
T ss_pred ECCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3455444333 9999999999998874
No 260
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=20.62 E-value=26 Score=31.50 Aligned_cols=40 Identities=10% Similarity=0.118 Sum_probs=26.4
Q ss_pred eeecCCCCCC--CCCCcEEEecCceEEEeecCCcccceeehhhhhhhhhc
Q psy3774 281 ASENMLSGNS--TKPGDIVVSMSGKTIEVLDTDAEGRLILCDALTYVERF 328 (963)
Q Consensus 281 ~~EN~~~~~a--~~pgDVi~~~~G~tvEi~NTDAEGRLvLADal~ya~~~ 328 (963)
..+|.|...+ ++|||+|.+-||+.|+ | +-+.|+..+.+..
T Consensus 46 V~~~spA~~aG~l~~GD~I~~ing~~v~--~------~~~~~~~~~l~~~ 87 (111)
T 2koj_A 46 ILPRGAAIQDGRLKAGDRLIEVNGVDLA--G------KSQEEVVSLLRST 87 (111)
T ss_dssp ECSSSHHHHHCSSCTTCEEEEETTEECT--T------SCHHHHHHHHHHC
T ss_pred ECCCChHHHCCCCCCCCEEEEECCEECC--C------CCHHHHHHHHHhC
Confidence 3456665554 8999999999998774 2 1245665555543
No 261
>1v1h_A Fibritin, fiber protein; chimera; 1.9A {Human adenovirus type 2} SCOP: b.83.1.1 h.1.17.1 PDB: 1v1i_A
Probab=20.58 E-value=30 Score=31.89 Aligned_cols=11 Identities=45% Similarity=1.123 Sum_probs=4.8
Q ss_pred eccCeeeccCC
Q psy3774 724 VGKGVTFDTGG 734 (963)
Q Consensus 724 VGKGiTFDsGG 734 (963)
.|=|++|||.|
T Consensus 59 LG~GLsFDs~G 69 (103)
T 1v1h_A 59 LGAGLSFDNSG 69 (103)
T ss_dssp BCTTCEECTTS
T ss_pred ecCCeeEcCCC
Confidence 34444444333
No 262
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.53 E-value=30 Score=30.81 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=18.0
Q ss_pred eccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 779 SENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 779 ~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
.+|.|...+ ++|||+|.+.||+.|+
T Consensus 46 ~~~spA~~aG~L~~GD~I~~vng~~v~ 72 (105)
T 1wha_A 46 AEGGAAHRAGTLQVGDRVLSINGVDVT 72 (105)
T ss_dssp CTTSSHHHHSSCCTTCEEEEESSCBCT
T ss_pred CCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 344444322 8999999999998775
No 263
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=20.48 E-value=21 Score=32.33 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=20.0
Q ss_pred EeeecCCCCCC--CCCCcEEEecCceEEE
Q psy3774 280 VASENMLSGNS--TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 280 ~~~EN~~~~~a--~~pgDVi~~~~G~tvE 306 (963)
...+|.|...+ .+|||+|.+-||+.|+
T Consensus 31 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~ 59 (106)
T 2la8_A 31 DLIQGQYPEIDSKLQRGDIITKFNGDALE 59 (106)
T ss_dssp ECCTTSCHHHHTTCCTTCEEEEESSCBCS
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECC
Confidence 44455555443 8999999999999764
No 264
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.45 E-value=24 Score=31.65 Aligned_cols=32 Identities=6% Similarity=0.224 Sum_probs=22.6
Q ss_pred CcEEEEEEEeeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 769 ELNIIGVIVASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 769 ~vnV~~vi~~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
++-|..+ .+|.|...+ ++|||+|.+.||+.|+
T Consensus 42 gv~V~~V---~~~spA~~aggL~~GD~Il~vng~~v~ 75 (107)
T 1uhp_A 42 GIFVSKI---VDSGPAAKEGGLQIHDRIIEVNGRDLS 75 (107)
T ss_dssp CCEEEEE---CSSSHHHHTTCCCSSCEEEEETTEECT
T ss_pred CEEEEEe---CCCChHHHcCCCCCCCEEEEECCEECC
Confidence 3444443 455555554 9999999999999884
No 265
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=20.38 E-value=60 Score=35.02 Aligned_cols=28 Identities=14% Similarity=0.258 Sum_probs=23.4
Q ss_pred EEeeecCCCCCC-CCCCcEEEecCceEEE
Q psy3774 279 IVASENMLSGNS-TKPGDIVVSMSGKTIE 306 (963)
Q Consensus 279 ~~~~EN~~~~~a-~~pgDVi~~~~G~tvE 306 (963)
.-..+|.|...| +++||+|++.||+.|.
T Consensus 247 ~~v~~~spA~~aGl~~GD~I~~ing~~v~ 275 (324)
T 1y8t_A 247 VEVVAGGAAANAGVPKGVVVTKVDDRPIN 275 (324)
T ss_dssp EEECTTSTTTTTTCCTTCEEEEETTEECC
T ss_pred EEECCCChHHHcCCCCCCEEEEECCEECC
Confidence 345678888777 9999999999999874
No 266
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=20.37 E-value=20 Score=31.43 Aligned_cols=24 Identities=13% Similarity=0.361 Sum_probs=18.0
Q ss_pred ccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
+|.|...+ ++|||+|.+.||+.|+
T Consensus 39 ~~spA~~aG~l~~GD~I~~vng~~v~ 64 (97)
T 1n7e_A 39 KGGLAERTGAIHIGDRILAINSSSLK 64 (97)
T ss_dssp TTSHHHHHTCCCTTCEEEEETTEECT
T ss_pred CCCHHHHCCCCCCCCEEEEECCEECC
Confidence 44444333 8999999999998874
No 267
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=20.21 E-value=36 Score=29.47 Aligned_cols=16 Identities=19% Similarity=0.366 Sum_probs=14.6
Q ss_pred CCCCCEEEccCCeEEe
Q psy3774 788 TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 788 ~kPgDVits~~GkTVE 803 (963)
+++||+|.+.||+.|+
T Consensus 42 l~~GD~I~~vng~~v~ 57 (91)
T 2f5y_A 42 LQQLDTVLQLNERPVE 57 (91)
T ss_dssp CCTTCEEEEETTEECT
T ss_pred CCCCCEEEEECCEECC
Confidence 8999999999998774
No 268
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=20.17 E-value=26 Score=30.94 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=18.1
Q ss_pred ccCCCCC-C-CCCCCEEEccCCeEEe
Q psy3774 780 ENMLSGN-S-TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 780 ENm~~g~-a-~kPgDVits~~GkTVE 803 (963)
+|.|... . ++|||+|.+.||+.|+
T Consensus 46 ~~spA~~aG~L~~GD~I~~vng~~v~ 71 (101)
T 2jik_A 46 ENGAAALDGRLQEGDKILSVNGQDLK 71 (101)
T ss_dssp TTSHHHHHCCCCTTCEEEEETTEECS
T ss_pred CCCHHHHCCCCCCCCEEEEECCEECC
Confidence 4544433 2 8999999999998875
No 269
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=20.04 E-value=23 Score=31.84 Aligned_cols=26 Identities=12% Similarity=0.249 Sum_probs=19.2
Q ss_pred eeccCCCCCC--CCCCCEEEccCCeEEe
Q psy3774 778 ASENMLSGNS--TKPGDIVVSMSGKTIE 803 (963)
Q Consensus 778 ~~ENm~~g~a--~kPgDVits~~GkTVE 803 (963)
..+|.|...| ++|||+|.+-||+.|+
T Consensus 43 V~~gspA~~aG~L~~GD~Il~ING~~v~ 70 (97)
T 2ejy_A 43 ILHGGMIHRQGSLHVGDEILEINGTNVT 70 (97)
T ss_dssp ECSSSHHHHHTCCCTTCEEEEETTBCCC
T ss_pred eCCCCHHHHcCCCCCCCEEEEECCEECC
Confidence 3445554443 8999999999998875
Done!