BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3777
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G2T8|RL19_HERAR 50S ribosomal protein L19 OS=Herminiimonas arsenicoxydans GN=rplS
PE=3 SV=1
Length = 128
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 84/93 (90%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ +EQEEI RL KNIPDF GDT+IVN+NV+EGTRKR QAYEG+VISRRN+GLNSN
Sbjct: 1 MDLIQTLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGD 93
>sp|A2SES9|RL19_METPP 50S ribosomal protein L19 OS=Methylibium petroleiphilum (strain
PM1) GN=rplS PE=3 SV=1
Length = 117
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 83/93 (89%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ +EQEEI RL K IP F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLNS+
Sbjct: 1 MDLIQTLEQEEIARLNKTIPAFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGD 93
>sp|A1WG50|RL19_VEREI 50S ribosomal protein L19 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rplS PE=3 SV=1
Length = 128
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 81/93 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +E EEI RL K IPDF GDT+IVN+NV+EG+RKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQTLEAEEIARLNKTIPDFSAGDTVIVNVNVVEGSRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQ YSP+I+SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQTYSPLIASIEVKRRGD 93
>sp|A1WB49|RL19_ACISJ 50S ribosomal protein L19 OS=Acidovorax sp. (strain JS42) GN=rplS
PE=3 SV=1
Length = 127
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRKIS EG+ERTFQ YSP+I+SI VKRRGD
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGD 93
>sp|B9ME96|RL19_ACIET 50S ribosomal protein L19 OS=Acidovorax ebreus (strain TPSY)
GN=rplS PE=3 SV=1
Length = 127
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRKIS EG+ERTFQ YSP+I+SI VKRRGD
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGD 93
>sp|A6SVI7|RL19_JANMA 50S ribosomal protein L19 OS=Janthinobacterium sp. (strain
Marseille) GN=rplS PE=3 SV=1
Length = 128
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 85/93 (91%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ++EQEEI RL KNIPDF GDT++VN+NV+EGTRKR QAYEG+VISRRN+GLNSN
Sbjct: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVVVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGD 93
>sp|B1Y0H8|RL19_LEPCP 50S ribosomal protein L19 OS=Leptothrix cholodnii (strain ATCC
51168 / LMG 8142 / SP-6) GN=rplS PE=3 SV=1
Length = 117
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 84/93 (90%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQ++EQEEI RL K IP F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLNS+
Sbjct: 1 MDLIQQLEQEEIARLNKVIPVFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP+I+SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGD 93
>sp|B2U8L3|RL19_RALPJ 50S ribosomal protein L19 OS=Ralstonia pickettii (strain 12J)
GN=rplS PE=3 SV=1
Length = 128
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 84/95 (88%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI++IEQEEI RL N IP F GDT+IVN+NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIEQIEQEEIKRLTANKTIPPFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQLYSP+++SI VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQLYSPLLASIEVKRRGD 95
>sp|A1TND3|RL19_ACIAC 50S ribosomal protein L19 OS=Acidovorax citrulli (strain AAC00-1)
GN=rplS PE=3 SV=1
Length = 128
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP+F GDT+IV++NV+EG RKR+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRKIS EG+ERTFQ YSP+I+SI VKRRGD
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGD 93
>sp|Q13VF1|RL19_BURXL 50S ribosomal protein L19 OS=Burkholderia xenovorans (strain
LB400) GN=rplS PE=3 SV=1
Length = 128
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 84/95 (88%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R +K IP+F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIARALGEKTIPEFAPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q0BH66|RL19_BURCM 50S ribosomal protein L19 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rplS PE=3 SV=1
Length = 130
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EGTRKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|B4EAN3|RL19_BURCJ 50S ribosomal protein L19 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rplS PE=3 SV=1
Length = 130
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A0K5P8|RL19_BURCH 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain
HI2424) GN=rplS PE=3 SV=1
Length = 130
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|B1JXU6|RL19_BURCC 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain
MC0-3) GN=rplS PE=3 SV=1
Length = 130
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q1BY01|RL19_BURCA 50S ribosomal protein L19 OS=Burkholderia cenocepacia (strain AU
1054) GN=rplS PE=3 SV=1
Length = 130
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IPDF GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPDFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q8Y0V7|RL19_RALSO 50S ribosomal protein L19 OS=Ralstonia solanacearum (strain
GMI1000) GN=rplS PE=3 SV=1
Length = 128
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI++IEQEEI RL N IP F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIEQIEQEEIKRLTANKTIPPFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQLYSP+++SI VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQLYSPLLASIEVKRRGD 95
>sp|A9ADS8|RL19_BURM1 50S ribosomal protein L19 OS=Burkholderia multivorans (strain
ATCC 17616 / 249) GN=rplS PE=3 SV=1
Length = 130
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q2SXZ8|RL19_BURTA 50S ribosomal protein L19 OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rplS
PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q63S33|RL19_BURPS 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
K96243) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A3NC04|RL19_BURP6 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
668) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q3JQ09|RL19_BURP1 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
1710b) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A3NXU0|RL19_BURP0 50S ribosomal protein L19 OS=Burkholderia pseudomallei (strain
1106a) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A1V6J1|RL19_BURMS 50S ribosomal protein L19 OS=Burkholderia mallei (strain SAVP1)
GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q62M53|RL19_BURMA 50S ribosomal protein L19 OS=Burkholderia mallei (strain ATCC
23344) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A2S4N7|RL19_BURM9 50S ribosomal protein L19 OS=Burkholderia mallei (strain NCTC
10229) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A3MHS0|RL19_BURM7 50S ribosomal protein L19 OS=Burkholderia mallei (strain NCTC
10247) GN=rplS PE=3 SV=1
Length = 129
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q12CW3|RL19_POLSJ 50S ribosomal protein L19 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rplS PE=3 SV=1
Length = 121
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 82/93 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP + GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQTLEQEEISRLNKTIPAYAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRK+S EG+ERTFQ+YSP+I+ I VKRRGD
Sbjct: 61 FIVRKVSNGEGVERTFQVYSPLIAKIEVKRRGD 93
>sp|A4JCK0|RL19_BURVG 50S ribosomal protein L19 OS=Burkholderia vietnamiensis (strain
G4 / LMG 22486) GN=rplS PE=3 SV=1
Length = 130
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|B1YV60|RL19_BURA4 50S ribosomal protein L19 OS=Burkholderia ambifaria (strain
MC40-6) GN=rplS PE=3 SV=1
Length = 130
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|A1VMA0|RL19_POLNA 50S ribosomal protein L19 OS=Polaromonas naphthalenivorans
(strain CJ2) GN=rplS PE=3 SV=1
Length = 130
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 82/93 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ +EQEEI RL K IP + GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQTLEQEEIARLNKTIPVYAPGDTVIVSVNVVEGTRKRLQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQ+YSP+I+ I VKR+GD
Sbjct: 61 FIVRKISNGEGVERTFQVYSPLIAKIEVKRKGD 93
>sp|B2JF32|RL19_BURP8 50S ribosomal protein L19 OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=rplS PE=3 SV=1
Length = 127
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IV++NV+EG RKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|B2T604|RL19_BURPP 50S ribosomal protein L19 OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=rplS PE=3 SV=1
Length = 129
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI +EQEEI R +K IP+F GDT+IV++NV+EGTRKR+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIAILEQEEIGRALGEKTIPEFAPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|Q39ID3|RL19_BURS3 50S ribosomal protein L19 OS=Burkholderia sp. (strain 383)
GN=rplS PE=3 SV=1
Length = 130
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRL--KKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI K+EQEEI R K IP+F GDT+IVN+NV+EG RKR+QAYEG+VI+ R++GLN
Sbjct: 1 MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAIRSRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP+++SI+VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLLASIVVKRRGD 95
>sp|C1DBG1|RL19_LARHH 50S ribosomal protein L19 OS=Laribacter hongkongensis (strain
HLHK9) GN=rplS PE=3 SV=1
Length = 123
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V + V EG R+R+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIQQLEQEEIARLGKTIPEFAPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQ YSP+++SI VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQAYSPLVASIEVKRRGD 93
>sp|Q5NXM4|RL19_AROAE 50S ribosomal protein L19 OS=Aromatoleum aromaticum (strain EbN1)
GN=rplS PE=3 SV=1
Length = 128
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLIQ++EQEEI RL +N IP F GDT+IV + V EGTR+R+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIQQLEQEEIARLTQNKTIPAFAPGDTVIVQVKVKEGTRERLQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
SNFIVRKIS EG+ERTFQ YSP++ SI VKRRGD
Sbjct: 61 SNFIVRKISSGEGVERTFQTYSPLVDSIEVKRRGD 95
>sp|Q82U36|RL19_NITEU 50S ribosomal protein L19 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rplS PE=3 SV=1
Length = 132
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 81/92 (88%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++E+EEI RL K IPDF GDT++VN+NV+EG RKR+QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIEQLEREEIERLGKTIPDFSPGDTLVVNVNVVEGDRKRVQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRG 92
FIVRKIS E +ERTFQ YSP+I+S+ VKRRG
Sbjct: 61 FIVRKISSGEAVERTFQTYSPLIASMEVKRRG 92
>sp|Q3SGC1|RL19_THIDA 50S ribosomal protein L19 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=rplS PE=3 SV=1
Length = 126
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 78/93 (83%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MN+I+++EQEEI RL K +PDF GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MNIIEQLEQEEIARLGKTVPDFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSA 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRKIS EG+ERTFQ YSP+++S+ VKRRGD
Sbjct: 61 FTVRKISAGEGVERTFQTYSPLVASVEVKRRGD 93
>sp|Q7NRV7|RL19_CHRVO 50S ribosomal protein L19 OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=rplS PE=3 SV=1
Length = 122
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 78/93 (83%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
M+LIQK+EQEEI RL K +P+F GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MDLIQKLEQEEIARLGKTLPEFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSA 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRK+S EG+ERTFQ YSP+++S+ VKRRGD
Sbjct: 61 FTVRKMSAGEGVERTFQTYSPLVASVEVKRRGD 93
>sp|Q47BI8|RL19_DECAR 50S ribosomal protein L19 OS=Dechloromonas aromatica (strain RCB)
GN=rplS PE=3 SV=1
Length = 126
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 78/93 (83%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++EQEEI RL K IP+F GDT++V + V EG R+R+QAYEG+VI++RN+GLNS
Sbjct: 1 MNLIEQLEQEEIARLGKTIPEFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSG 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
F VRKIS EG+ERTFQ YSP+++SI VKRRGD
Sbjct: 61 FTVRKISSGEGVERTFQTYSPLVASIEVKRRGD 93
>sp|Q9JVL1|RL19_NEIMA 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=rplS PE=3 SV=1
Length = 121
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 81/93 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K+IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|A9M2D0|RL19_NEIM0 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup C
(strain 053442) GN=rplS PE=3 SV=1
Length = 121
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 81/93 (87%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K+IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|A1KSJ8|RL19_NEIMF 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=rplS PE=3
SV=1
Length = 121
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|Q9K0K5|RL19_NEIMB 50S ribosomal protein L19 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rplS PE=1 SV=1
Length = 121
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|B4RIW2|RL19_NEIG2 50S ribosomal protein L19 OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=rplS PE=3 SV=1
Length = 121
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|Q5FA60|RL19_NEIG1 50S ribosomal protein L19 OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=rplS PE=3 SV=1
Length = 121
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 80/93 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLIQ++EQEEI RL K IP+F GDT++V++ V+EGTR R+QAYEG+VI+RRN+GLNSN
Sbjct: 1 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQAYEGVVIARRNRGLNSN 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
FIVRKIS EG+ERTFQLYSP + I VKRRGD
Sbjct: 61 FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGD 93
>sp|Q0AIV2|RL19_NITEC 50S ribosomal protein L19 OS=Nitrosomonas eutropha (strain C91)
GN=rplS PE=3 SV=1
Length = 129
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 80/92 (86%)
Query: 1 MNLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSN 60
MNLI+++E+EEI RL K IPDF GDT++VN+NV+EG RKR QA+EG+VI++RN+GLNS+
Sbjct: 1 MNLIEQLEREEIERLGKIIPDFSPGDTLVVNVNVVEGDRKRTQAFEGVVIAKRNRGLNSS 60
Query: 61 FIVRKISYNEGIERTFQLYSPIISSIIVKRRG 92
FIVRKIS E +ERTFQ YSP+I+S+ VKRRG
Sbjct: 61 FIVRKISSGEAVERTFQTYSPLIASMEVKRRG 92
>sp|A1K9L2|RL19_AZOSB 50S ribosomal protein L19 OS=Azoarcus sp. (strain BH72) GN=rplS
PE=3 SV=1
Length = 128
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 78/95 (82%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLK--KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLIQ +EQEEI RL K IP F GDT++V + V EG R+R+QAYEG+VI++RN+GLN
Sbjct: 1 MNLIQLLEQEEIARLTAGKTIPAFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP++++I VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLVATIEVKRRGD 95
>sp|Q2L2Q1|RL19_BORA1 50S ribosomal protein L19 OS=Bordetella avium (strain 197N)
GN=rplS PE=3 SV=1
Length = 129
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKNIP--DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI +EQEEI RL + P +F GDT+IV++NV+EGTRKR+QA+EG+VI++RN+GLN
Sbjct: 1 MNLIALLEQEEIKRLTGDKPVTEFAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S FIVRKIS E +ERTFQLYSP I+SI VKRRGD
Sbjct: 61 SAFIVRKISSGEAVERTFQLYSPQIASIEVKRRGD 95
>sp|B1XVN0|RL19_POLNS 50S ribosomal protein L19 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rplS PE=3 SV=1
Length = 131
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI+KIEQEE+ RL N +P F GDT++V++NV+EGTRKR QA+EG+VI++RN+GLN
Sbjct: 1 MNLIEKIEQEEVARLSANKVLPSFAPGDTVVVSVNVVEGTRKRTQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+I+S+ VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLIASVEVKRRGD 95
>sp|A4SW76|RL19_POLSQ 50S ribosomal protein L19 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rplS PE=3 SV=1
Length = 129
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 1 MNLIQKIEQEEIIRLKKN--IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLN 58
MNLI+KIEQEEI RL N +P F GDT++V +NV+EG RKR QA+EG+VI++RN+GLN
Sbjct: 1 MNLIEKIEQEEIARLSANKTLPSFAPGDTVVVGVNVVEGARKRTQAFEGVVIAKRNRGLN 60
Query: 59 SNFIVRKISYNEGIERTFQLYSPIISSIIVKRRGD 93
S+FIVRKIS EG+ERTFQ YSP+I+SI VKRRGD
Sbjct: 61 SSFIVRKISSGEGVERTFQTYSPLIASIEVKRRGD 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,795,935
Number of Sequences: 539616
Number of extensions: 1231073
Number of successful extensions: 4266
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3332
Number of HSP's gapped (non-prelim): 795
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)