Query psy3777
Match_columns 99
No_of_seqs 112 out of 1009
Neff 5.3
Searched_HMMs 13730
Date Fri Aug 16 17:02:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3777.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3777hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2zjrm1 b.34.5.6 (M:2-109) Rib 100.0 3.9E-45 2.8E-49 248.8 4.8 93 2-98 10-103 (108)
2 d2j01t1 b.34.5.6 (T:1-138) Rib 100.0 2.5E-43 1.8E-47 248.4 1.9 93 3-98 6-99 (138)
3 d2gycn1 b.34.5.6 (N:1-114) Rib 100.0 8.8E-46 6.4E-50 254.0 -10.5 94 2-98 2-96 (114)
4 d1zq1a1 b.38.3.1 (A:2-75) Glut 94.5 0.037 2.7E-06 33.5 5.1 62 21-93 10-73 (74)
5 d1nz9a_ b.34.5.4 (A:) N-utiliz 77.6 1.8 0.00013 24.1 4.1 36 21-63 4-39 (58)
6 d1jb7a1 b.40.4.3 (A:36-204) Te 77.5 0.93 6.7E-05 30.4 3.3 44 16-66 72-116 (169)
7 d2d6fa1 b.38.3.1 (A:2-73) Glut 70.6 1.7 0.00013 25.6 2.9 56 21-92 14-71 (72)
8 d1ugpb_ b.34.4.4 (B:) Cobalt-c 70.0 0.95 6.9E-05 31.9 1.9 36 18-54 135-174 (226)
9 d1v29b_ b.34.4.4 (B:) Cobalt-c 69.5 0.96 7E-05 31.9 1.8 35 19-54 139-177 (229)
10 d2eifa1 b.34.5.2 (A:1-73) Euka 65.3 7.7 0.00056 22.2 5.1 54 18-79 11-66 (73)
11 d2vv5a1 b.38.1.3 (A:113-179) M 64.2 2.1 0.00015 24.0 2.3 38 21-77 17-54 (67)
12 d1nppa2 b.34.5.4 (A:191-248) N 61.4 2.1 0.00015 23.7 1.9 28 20-54 3-30 (58)
13 d1bkba1 b.34.5.2 (A:4-74) Euka 61.4 9.6 0.0007 21.6 5.0 54 18-79 10-65 (71)
14 d1iz6a1 b.34.5.2 (A:2-70) Euka 61.4 8 0.00058 21.8 4.6 50 18-79 7-62 (69)
15 d1yvca1 b.40.4.12 (A:1-69) Hyp 58.2 8.7 0.00063 21.6 4.4 44 18-73 10-53 (69)
16 d1ib8a1 b.38.2.1 (A:91-164) Hy 57.2 13 0.00096 20.7 5.5 49 24-79 13-61 (74)
17 d1xjva1 b.40.4.3 (A:6-145) Pro 56.3 2.4 0.00017 27.4 1.7 39 16-62 61-100 (140)
18 d1qzga_ b.40.4.3 (A:) Protecti 55.5 3.2 0.00023 27.9 2.3 34 16-56 88-122 (170)
19 d1wi5a_ b.40.4.5 (A:) S1-domai 49.5 17 0.0013 21.9 5.1 25 18-42 64-88 (119)
20 d1kl9a2 b.40.4.5 (A:3-88) Euka 49.4 6.9 0.0005 22.3 2.9 22 21-42 59-80 (86)
21 d1u1za_ d.38.1.6 (A:) (3R)-hyd 48.5 8.5 0.00062 23.8 3.5 28 20-48 99-126 (145)
22 d1vqok1 b.39.1.1 (K:1-132) Rib 45.1 14 0.001 23.6 4.2 37 17-54 42-78 (132)
23 d1wrua2 b.106.1.1 (A:3-176) Ba 44.6 19 0.0014 22.2 4.8 28 19-53 43-70 (174)
24 d1hh2p1 b.40.4.5 (P:127-198) S 44.1 8.9 0.00065 21.8 2.8 20 17-36 39-60 (72)
25 d1yeza1 b.40.4.12 (A:1-68) Hyp 43.2 16 0.0012 20.1 3.9 42 21-73 10-51 (68)
26 d2bi0a1 d.38.1.4 (A:8-185) Hyp 42.8 6.4 0.00047 25.4 2.2 17 20-36 94-110 (178)
27 d1dzfa2 d.78.1.1 (A:144-215) E 41.1 6.9 0.0005 22.5 1.9 12 21-32 46-57 (72)
28 d1hmja_ d.78.1.1 (A:) RNA poly 40.2 6.9 0.00051 22.2 1.8 13 21-33 39-51 (68)
29 d1uwva1 b.40.4.12 (A:15-74) rR 39.1 25 0.0018 18.7 4.3 30 19-53 27-56 (60)
30 d1z6ba1 d.38.1.6 (A:84-229) (3 38.5 16 0.0012 22.5 3.7 16 20-35 98-113 (146)
31 d1hr0w_ b.40.4.5 (W:) Translat 38.5 6.6 0.00048 22.6 1.5 27 16-42 41-67 (71)
32 d3bzka4 b.40.4.5 (A:637-730) T 37.7 15 0.0011 21.3 3.1 21 22-42 63-83 (94)
33 d2qdyb1 b.34.4.4 (B:1-211) Iro 37.2 7.3 0.00053 26.7 1.8 36 18-54 119-159 (211)
34 d1pk6a_ b.22.1.1 (A:) Compleme 37.1 18 0.0013 21.3 3.6 30 21-50 97-130 (133)
35 d2z1ca1 b.40.14.1 (A:2-72) Hyd 37.0 9.8 0.00071 21.8 2.2 14 19-32 32-45 (71)
36 d2ahob2 b.40.4.5 (B:1-84) Euka 35.9 12 0.00091 20.9 2.5 21 22-42 58-78 (84)
37 d1ah9a_ b.40.4.5 (A:) Translat 35.3 8.4 0.00061 22.1 1.6 26 16-41 40-65 (71)
38 d1c3ha_ b.22.1.1 (A:) 30 kDa a 34.2 26 0.0019 21.1 4.1 32 20-51 96-133 (137)
39 d2ix0a3 b.40.4.5 (A:558-644) E 33.9 14 0.001 21.5 2.5 22 21-42 60-81 (87)
40 d1eika_ d.78.1.1 (A:) RNA poly 33.9 9.8 0.00072 22.0 1.8 13 21-33 50-62 (77)
41 d2bi0a2 d.38.1.4 (A:186-337) H 33.4 41 0.003 21.0 5.1 17 20-36 96-112 (152)
42 d1iq6a_ d.38.1.4 (A:) (R)-spec 33.3 13 0.00092 22.2 2.4 16 21-36 85-100 (132)
43 d1q6wa_ d.38.1.4 (A:) Monoamin 33.3 15 0.0011 22.3 2.7 17 20-36 97-113 (151)
44 d1gcqc_ b.34.2.1 (C:) Vav N-te 33.2 9.7 0.00071 21.3 1.7 12 21-32 28-39 (69)
45 d2je6i1 b.40.4.5 (I:66-152) S1 32.6 38 0.0028 18.8 4.6 30 21-57 54-83 (87)
46 d1jb7a2 b.40.4.3 (A:205-328) T 32.6 15 0.0011 23.3 2.7 19 16-34 55-73 (124)
47 d2rdea1 b.45.2.1 (A:138-247) H 32.2 22 0.0016 22.1 3.4 37 18-54 38-74 (110)
48 d1pk6c_ b.22.1.1 (C:) Compleme 32.2 25 0.0018 20.8 3.7 30 21-50 94-126 (129)
49 d1bf2a1 b.1.18.2 (A:1-162) Iso 32.2 16 0.0012 23.0 2.9 22 68-91 14-35 (162)
50 d1gr3a_ b.22.1.1 (A:) Collagen 31.9 12 0.00089 22.3 2.1 30 21-50 95-129 (132)
51 d1gvha2 b.43.4.2 (A:147-253) F 31.9 19 0.0014 20.6 3.0 20 17-36 32-51 (107)
52 d1t0ha_ b.34.2.1 (A:) SH3-like 31.5 14 0.001 22.1 2.4 24 21-50 46-69 (96)
53 d1d1na_ b.43.3.1 (A:) Initiati 30.9 14 0.001 22.4 2.2 16 17-32 77-92 (99)
54 d2c2ia1 d.38.1.4 (A:2-150) Hyp 30.2 29 0.0021 21.1 3.8 17 20-36 97-113 (149)
55 d1h9ra2 b.40.6.2 (A:200-261) C 29.6 34 0.0025 18.5 3.7 22 43-64 2-23 (62)
56 d2ba0a1 b.40.4.5 (A:53-135) S1 29.5 23 0.0017 19.6 3.0 30 21-57 50-79 (83)
57 d1w8oa1 b.1.18.2 (A:403-505) S 28.8 52 0.0038 19.2 5.3 59 22-82 13-71 (103)
58 d1ue9a_ b.34.2.1 (A:) Intersec 28.5 18 0.0013 20.0 2.4 24 21-50 25-48 (80)
59 d1ueba1 b.34.5.2 (A:1-63) Elon 28.4 43 0.0031 18.1 6.7 51 20-78 5-56 (63)
60 d1c06a_ d.66.1.2 (A:) Ribosoma 28.1 15 0.0011 24.0 2.1 16 16-31 84-101 (159)
61 d2as0a1 b.122.1.9 (A:1-72) Hyp 27.9 16 0.0012 20.1 2.0 37 20-68 31-67 (72)
62 d2asba1 b.40.4.5 (A:108-183) S 27.8 27 0.002 19.8 3.1 20 17-36 43-64 (76)
63 d2ifra1 b.29.1.20 (A:1-206) Sc 27.7 76 0.0055 21.3 6.0 40 21-79 82-121 (206)
64 d1go3e1 b.40.4.5 (E:79-184) C- 27.6 21 0.0016 21.0 2.7 22 21-42 57-78 (106)
65 d2do3a1 b.34.5.5 (A:462-523) T 27.5 13 0.00098 20.9 1.6 27 21-54 10-36 (62)
66 d1wlpb1 b.34.2.1 (B:229-281) p 26.4 16 0.0011 19.2 1.7 14 20-33 17-30 (53)
67 g1y43.1 b.29.1.20 (A:1-32,B:3- 25.5 86 0.0063 20.8 5.9 15 21-35 86-100 (203)
68 d2ey4a1 b.122.1.1 (A:253-336) 25.3 17 0.0012 20.7 1.8 26 20-53 30-55 (84)
69 d1vyva1 b.34.2.1 (A:71-215) SH 25.2 27 0.0019 21.7 2.9 16 20-35 47-62 (145)
70 d2f41a1 d.38.1.5 (A:73-183) Tr 25.2 60 0.0044 18.7 5.1 33 20-53 66-98 (111)
71 d2j01o1 b.39.1.1 (O:1-122) Rib 25.0 47 0.0034 20.5 4.1 35 20-54 31-67 (122)
72 d2nn6i1 b.40.4.5 (I:61-185) Ex 24.8 18 0.0013 22.3 2.0 15 21-35 61-75 (125)
73 d1cqxa2 b.43.4.2 (A:151-261) F 24.6 58 0.0042 18.4 4.4 20 17-36 30-49 (111)
74 d1vqoq1 b.34.5.1 (Q:1-95) Ribo 24.3 19 0.0014 21.8 1.9 37 19-58 30-72 (95)
75 d1o91a_ b.22.1.1 (A:) Collagen 24.1 16 0.0011 21.9 1.6 14 21-34 94-107 (131)
76 d1uj0a_ b.34.2.1 (A:) Signal t 24.0 19 0.0014 19.1 1.8 13 21-33 20-32 (58)
77 d1pk6b_ b.22.1.1 (B:) Compleme 24.0 46 0.0033 19.4 3.8 30 21-50 97-129 (132)
78 d2fhfa1 b.1.18.2 (A:288-402) P 23.9 30 0.0021 20.4 2.9 20 68-89 15-34 (115)
79 d3d3ra1 b.40.14.1 (A:1-76) Hyd 23.7 23 0.0017 20.3 2.2 14 19-32 35-49 (76)
80 d1k4us_ b.34.2.1 (S:) p67phox 23.7 24 0.0018 18.8 2.2 14 21-34 23-36 (62)
81 d1iq8a3 b.122.1.1 (A:506-582) 23.7 19 0.0014 20.1 1.8 12 20-31 31-42 (77)
82 d1ng2a1 b.34.2.1 (A:157-214) p 23.6 19 0.0014 19.0 1.7 14 21-34 20-33 (58)
83 d1sroa_ b.40.4.5 (A:) S1 RNA-b 23.2 29 0.0021 19.1 2.6 15 22-36 50-64 (76)
84 d2z0sa1 b.40.4.5 (A:60-147) S1 23.1 40 0.0029 18.8 3.3 17 20-36 54-70 (88)
85 d1u06a1 b.34.2.1 (A:7-61) alph 22.9 21 0.0015 18.6 1.8 14 21-34 18-31 (55)
86 d1ckaa_ b.34.2.1 (A:) C-Crk, N 22.7 20 0.0014 18.9 1.7 12 21-32 19-30 (57)
87 d2rn8a1 b.34.2.1 (A:176-228) B 22.6 21 0.0015 18.5 1.7 11 21-31 16-26 (53)
88 d2ot2a1 b.40.14.1 (A:1-90) Hyd 22.2 23 0.0017 21.0 2.0 13 20-32 40-52 (90)
89 d2owna2 d.38.1.8 (A:150-258) P 21.4 65 0.0047 18.0 4.1 18 20-37 61-78 (109)
90 d1kjwa1 b.34.2.1 (A:430-525) P 21.4 22 0.0016 20.3 1.8 14 21-34 24-37 (96)
91 d2apoa1 b.122.1.1 (A:247-331) 21.3 22 0.0016 20.2 1.8 26 20-53 31-56 (85)
92 d2q07a1 b.122.1.1 (A:460-527) 21.1 23 0.0017 19.7 1.8 11 20-30 24-34 (68)
93 d1ng2a2 b.34.2.1 (A:215-332) p 21.1 21 0.0015 21.2 1.7 13 21-33 32-44 (118)
94 d1f56a_ b.6.1.1 (A:) Plantacya 21.0 20 0.0015 20.9 1.6 13 21-33 18-30 (91)
95 d1guta_ b.40.6.1 (A:) Molybdat 20.9 60 0.0044 17.3 3.6 22 43-64 6-27 (67)
96 d2gy9d1 d.66.1.2 (D:2-205) Rib 20.9 21 0.0015 24.2 1.8 16 16-31 127-144 (204)
97 d1aoha_ b.2.2.2 (A:) Cohesin d 20.8 46 0.0034 20.2 3.4 26 21-46 10-35 (143)
98 d2b3na1 d.38.1.4 (A:6-159) Hyp 20.8 30 0.0022 21.4 2.5 16 21-36 110-125 (154)
99 d1uffa_ b.34.2.1 (A:) Intersec 20.4 22 0.0016 20.0 1.7 12 21-32 23-34 (93)
100 d2nn6g1 b.40.4.5 (G:107-194) S 20.3 40 0.0029 19.4 2.9 20 16-35 44-63 (88)
101 d1q7ha1 b.122.1.1 (A:69-153) H 20.3 25 0.0018 19.9 1.8 26 20-53 31-56 (85)
102 d2c35b1 b.40.4.5 (B:78-171) C- 20.2 31 0.0023 19.6 2.3 22 21-42 59-80 (94)
103 d1oota_ b.34.2.1 (A:) Hypothet 20.1 27 0.002 18.3 1.9 14 21-34 19-32 (58)
104 d1phta_ b.34.2.1 (A:) Phosphat 20.1 26 0.0019 20.1 1.9 12 21-32 21-32 (83)
No 1
>d2zjrm1 b.34.5.6 (M:2-109) Ribosomal protein L19 {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00 E-value=3.9e-45 Score=248.79 Aligned_cols=93 Identities=43% Similarity=0.782 Sum_probs=89.6
Q ss_pred chHHHHHHHHHHhhcCCCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeecCC
Q psy3777 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLYSP 81 (99)
Q Consensus 2 ~li~~~e~~~~~~~~~~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~SP 81 (99)
+|++.+|++++ +++|+|+|||+|+|++++.||+|+|+|.|+|+|||++++|+++||||||+++|+|||++||+|||
T Consensus 10 ~li~~ie~~~~----k~iP~f~~GDtV~V~~~i~Eg~k~RiQ~FeGvvI~~~~~g~~~tftvRki~~g~GVEr~fpl~SP 85 (108)
T d2zjrm1 10 ELLRGIEQDHT----RQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPFASP 85 (108)
T ss_dssp HHHHHTTGGGC----CCCCCCSSSEEEEEECCTTSSSCCCCEEEECCEEECCCCGGGCEEEEEEEETTEEEEEEEETTCT
T ss_pred HHHHHHHHHhC----cCCCCcCCCCEEEEEEEEcCCCccceEEEEEEEEEEeCCCccceEEEEEEecCccEEEEEEcCCC
Confidence 57888888876 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEeee-eeeee
Q psy3777 82 IISSIIVKRRGD-RNAYI 98 (99)
Q Consensus 82 ~I~~I~V~~~~k-rra~l 98 (99)
.|++|+|+++|| |||+|
T Consensus 86 ~i~~IeV~r~~kvRRakL 103 (108)
T d2zjrm1 86 LVNQVTIVERGKVRRAKL 103 (108)
T ss_dssp TEEEEEEEECCCCSSSCC
T ss_pred CccEEEEEEecceeeeee
Confidence 999999999999 99998
No 2
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.5e-43 Score=248.37 Aligned_cols=93 Identities=46% Similarity=0.804 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHhhcCCCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeecCCc
Q psy3777 3 LIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLYSPI 82 (99)
Q Consensus 3 li~~~e~~~~~~~~~~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~SP~ 82 (99)
|++.+|++|+ +.++|+|+|||+|+|++.+.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++||||||+
T Consensus 6 Li~~iE~~~~---k~~iP~fr~GDtV~V~~~i~Eg~k~RiQ~f~GvvI~~~~~g~~~tftvRki~~gvGVEr~fpl~SP~ 82 (138)
T d2j01t1 6 LIKLVESRYV---RTDLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFNTTFTVRKVSYGVGVERIFPLHSPL 82 (138)
T ss_dssp HHHHHHCCCC---CSCSCCCCSSCBBCCCCCCBTTBSCCCCCCBCEEEEEECCSSSCEEEEEEEETTEEEEEEECSSSSC
T ss_pred HHHHHHHHhh---cccCCCcCCCCEEEEEEEEcCCCceEEEEEEEEEEEEeCCCcceEEEEEEEecCccEEEEEeccCCC
Confidence 6999999998 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEeee-eeeee
Q psy3777 83 ISSIIVKRRGD-RNAYI 98 (99)
Q Consensus 83 I~~I~V~~~~k-rra~l 98 (99)
|++|+|+++|| |||||
T Consensus 83 I~~IeVvr~gkvRRAKL 99 (138)
T d2j01t1 83 IQKIDIVQRGRARRAKL 99 (138)
T ss_dssp SCCCBCCCCBCCSSSSC
T ss_pred ccceEEeecCceehhhe
Confidence 99999999999 99998
No 3
>d2gycn1 b.34.5.6 (N:1-114) Ribosomal protein L19 {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=8.8e-46 Score=254.01 Aligned_cols=94 Identities=54% Similarity=0.918 Sum_probs=92.3
Q ss_pred chHHHHHHHHHHhhcCCCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeecCC
Q psy3777 2 NLIQKIEQEEIIRLKKNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLYSP 81 (99)
Q Consensus 2 ~li~~~e~~~~~~~~~~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~SP 81 (99)
|||+.+|++|+ ++++|+|+|||+|+|++++.||+|+|+|.|+|+|||++|+|+++||||||+++|+|||++||||||
T Consensus 2 nli~~ie~~q~---k~~iP~f~~GDtV~V~~~i~eg~K~RiQ~feGvvIa~k~~G~~~tftvRki~~GvGVEr~fpl~SP 78 (114)
T d2gycn1 2 NIIKQLEQEQM---KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSP 78 (114)
T ss_dssp CTTTSSSSSTT---CCCCCCSCCCTTCCCCCCCCCCSSSSCCCCCCCCCCSCBCCCSSSCCCBCCCCCSSSCCCCCCCSS
T ss_pred hHHHHHHHHHh---hccCCCcCCCCEEEEEEEEccCCcceeeEEEEEEEEEeCCCcceEEEEEEecCCccEEEEEEeCCC
Confidence 78999999999 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEeee-eeeee
Q psy3777 82 IISSIIVKRRGD-RNAYI 98 (99)
Q Consensus 82 ~I~~I~V~~~~k-rra~l 98 (99)
+|++|+|+++|| |||||
T Consensus 79 ~I~~IeV~~~~kvRRaKL 96 (114)
T d2gycn1 79 VVDSISVKRRGAVRKAKL 96 (114)
T ss_dssp CTTCCCCCCCSCCCCSCT
T ss_pred CcceeEEeccCceehhhe
Confidence 999999999999 99998
No 4
>d1zq1a1 b.38.3.1 (A:2-75) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.51 E-value=0.037 Score=33.51 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=41.8
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecC--eeEEEEEeecCCccceEEEEEeee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYN--EGIERTFQLYSPIISSIIVKRRGD 93 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~g--vGVEr~fpl~SP~I~~I~V~~~~k 93 (99)
.+.|||.|+|......+ -..|+|+++-.-.-+-...++| |.-+| +|+. .-.|++|+++.++|
T Consensus 10 ~~~~GD~Vri~~~~~~~----~~~~eGilmP~~e~s~~~~ivl-KL~nGYNiGi~------~~~i~~ievlek~k 73 (74)
T d1zq1a1 10 NINVGDFVRITKEEDGE----EVTYEGYIMPPYELSAGDTLVL-KLENGYNIGIA------LEKIRRIEVLERAK 73 (74)
T ss_dssp TCCTTCEEEEEEESSSS----EEECCEEECCCCTTCCCSEEEE-EETTSCEEEEE------GGGEEEEEEEECCC
T ss_pred CCCCCCEEEEEEecCCC----ceEEEEEEcCCcccCCCCEEEE-EecCceeeccc------hhHeeEEEEEeecc
Confidence 57899999997753222 1489999997644333455665 56666 4542 35788999998875
No 5
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=77.60 E-value=1.8 Score=24.06 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=25.1
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEE
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIV 63 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftl 63 (99)
+|.+||.|+|. +|. .+-|+|.|..+....-.-++.|
T Consensus 4 ~F~~Gd~V~I~----~Gp---F~g~~g~V~~i~~~k~rv~V~v 39 (58)
T d1nz9a_ 4 AFREGDQVRVV----SGP---FADFTGTVTEINPERGKVKVMV 39 (58)
T ss_dssp SCCTTCEEEEC----SGG---GTTCEEEEEEEETTTTEEEEEE
T ss_pred cccCCCEEEEe----ccC---CCCCEEEEEEEcCCCCEEEEEE
Confidence 79999999985 343 5689999988865432344444
No 6
>d1jb7a1 b.40.4.3 (A:36-204) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=77.45 E-value=0.93 Score=30.36 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=34.0
Q ss_pred cCCCCCc-CCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEe
Q psy3777 16 KKNIPDF-VTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKI 66 (99)
Q Consensus 16 ~~~~p~f-~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i 66 (99)
..++|.+ .+||+|.++= =++|.|.|=..+..+.+-.++|-|=+-
T Consensus 72 ~~~LP~V~~~GDII~l~r-------v~i~~~~g~~~~v~~~~~~SswavF~~ 116 (169)
T d1jb7a1 72 FEDLPIIHRAGDIIRVHR-------ATLRLYNGQRQFNANVFYSSSWALFST 116 (169)
T ss_dssp GGGSCCCCEETCEEEEEE-------EEEEEETTEEEEEEETTTTCEEEEECS
T ss_pred HHHCCCCCCCCCEEEEEE-------EEEEEECCceeEEEccccceeEEEEeC
Confidence 4689997 5899999973 346788888888878787899987443
No 7
>d2d6fa1 b.38.3.1 (A:2-73) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=70.58 E-value=1.7 Score=25.64 Aligned_cols=56 Identities=25% Similarity=0.461 Sum_probs=37.0
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecC--eeEEEEEeecCCccceEEEEEee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYN--EGIERTFQLYSPIISSIIVKRRG 92 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~g--vGVEr~fpl~SP~I~~I~V~~~~ 92 (99)
.+.+||.|+|.. ++ ..|+|+++-.--.+-+..++| +.-+| +|+.. + .+ +|+++.+|
T Consensus 14 ~i~vGD~V~i~~---~~-----~~~eGilmP~~e~sd~~~iVl-KL~nGYNiGi~~-----~-~i-~ie~iek~ 71 (72)
T d2d6fa1 14 SIDVGDMVLVEK---PD-----VTYEGMVLDRADDADDRHIVL-KLENGYNIGVEI-----S-DA-RIELLEKG 71 (72)
T ss_dssp TCCTTCEEEEEC---SS-----CEEEEEECCCCTTSCSSEEEE-ECTTSCEEEEEC-----T-TC-CCCEEECC
T ss_pred CCCCCCEEEEEE---CC-----cEEEEEEcCCcccCCCCEEEE-EecCceeEeeec-----c-cc-EEEEEecC
Confidence 578999999973 22 599999998655444555655 56555 57652 1 34 47777654
No 8
>d1ugpb_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Pseudonocardia thermophila [TaxId: 1848]}
Probab=70.05 E-value=0.95 Score=31.86 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=27.6
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceE----EEEEEEEec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAY----EGIVISRRN 54 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f----~GvvIa~r~ 54 (99)
.-|.|.+||.|+|.-...- .-+|+..| .|+|.+.++
T Consensus 135 ~~p~F~vGd~Vrv~~~~~~-gHtR~P~Y~rg~~G~I~~~~g 174 (226)
T d1ugpb_ 135 RPPKFKEGDVVRFSTASPK-GHARRARYVRGKTGTVVKHHG 174 (226)
T ss_dssp SCCSCCTTCEEEECCCCCS-SCCCCCGGGTTCEEEEEEEEE
T ss_pred CCCccCCCCEEEEccCCCC-CceeCchhhcCCeeEEEEEec
Confidence 3477999999999866553 36887776 699888764
No 9
>d1v29b_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=69.47 E-value=0.96 Score=31.85 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=27.5
Q ss_pred CCCcCCCCEEEEEEEEecCCceeeceE----EEEEEEEec
Q psy3777 19 IPDFVTGDTIIVNLNVIEGTRKRIQAY----EGIVISRRN 54 (99)
Q Consensus 19 ~p~f~~GD~v~V~~~i~eg~k~r~q~f----~GvvIa~r~ 54 (99)
-|.|.+||.|+|.-.-.. .-+|...| .|+|++.++
T Consensus 139 ~p~F~vGd~Vrv~~~~~~-gHtRlP~Y~rg~~G~i~~~~g 177 (229)
T d1v29b_ 139 FPRFEVGERIKTRNIHPT-GHTRFPRYVRDKYGVIEEVYG 177 (229)
T ss_dssp CCSCCTTCEEEECCCCCS-SCCSCCGGGTTCEEEEEEEEE
T ss_pred CCcCCCCCEEEEeeCCCC-CccccchhhcCCeeEEEEEec
Confidence 478999999999865543 36787776 698888875
No 10
>d2eifa1 b.34.5.2 (A:1-73) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=65.31 E-value=7.7 Score=22.16 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=34.9
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecC-C-CcceEEEEEeecCeeEEEEEeec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNK-G-LNSNFIVRKISYNEGIERTFQLY 79 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~-g-~~stftlR~i~~gvGVEr~fpl~ 79 (99)
+.-+++.|+.|.+ +|+--++-.|+ ..+-++ | .-....++|++.|--.|.+||-.
T Consensus 11 ~~~~lKkG~~i~~-----~g~p~~V~e~~---~~kpGk~G~A~~r~k~kni~tG~~~e~~~~s~ 66 (73)
T d2eifa1 11 NVGSLKVGQYVMI-----DGVPCEIVDIS---VSKPGKHGGAKARVVGIGIFEKVKKEFVAPTS 66 (73)
T ss_dssp EGGGCCTTSEEEE-----TTEEEEEEEEE---ECCCCSSSCCEEEEEEEESSSCCEEEEEEETT
T ss_pred EHHHccCCCEEEE-----CCEEEEEEEEE---EECCCCcccEEEEEEEEEEecCcEEEEEEcCC
Confidence 3458999999877 34333333333 122223 3 23567799999999999999876
No 11
>d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]}
Probab=64.16 E-value=2.1 Score=23.99 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=24.0
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEe
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQ 77 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fp 77 (99)
+|++||.|++. .+.|.|..+. +. +.+||.. -|....+|
T Consensus 17 pf~vGD~I~i~------------~~~G~V~~I~---l~-~T~l~~~---dg~~i~iP 54 (67)
T d2vv5a1 17 PFRAGEYVDLG------------GVAGTVLSVQ---IF-STTMRTA---DGKIIVIP 54 (67)
T ss_dssp SSCTTCEEESS------------SCEEEEEEEC---SS-EEEEECT---TSCEEEEE
T ss_pred CccCCCEEEEC------------CEEEEEEEEe---ce-EEEEEcc---CCCEEEEE
Confidence 59999999872 3679888875 33 3455543 34444444
No 12
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=61.41 E-value=2.1 Score=23.74 Aligned_cols=28 Identities=29% Similarity=0.457 Sum_probs=21.8
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRN 54 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~ 54 (99)
.+|.+||.|+|. +|. ..-|+|.|..+..
T Consensus 3 vdf~~Gd~V~I~----~Gp---F~g~~g~V~~i~~ 30 (58)
T d1nppa2 3 VEFEKGDQVRVI----EGP---FMNFTGTVEEVHP 30 (58)
T ss_dssp CSCCTTCEEEEC----SST---TTTCEEEEEEEEG
T ss_pred ccccCCCEEEEc----ccC---CCCCEEEEEEEcC
Confidence 479999999985 353 5689999988865
No 13
>d1bkba1 b.34.5.2 (A:4-74) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=61.37 E-value=9.6 Score=21.59 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=33.8
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecC-C-CcceEEEEEeecCeeEEEEEeec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNK-G-LNSNFIVRKISYNEGIERTFQLY 79 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~-g-~~stftlR~i~~gvGVEr~fpl~ 79 (99)
+.-+++.|+.|.+ +|.--++-.|+= .+-++ | .-....+|++..|-=.|.+||..
T Consensus 10 ~a~~lKkG~~i~~-----~g~p~~V~~~~~---~kpgk~G~a~~r~k~k~i~tG~~~e~~~~s~ 65 (71)
T d1bkba1 10 EAGELKEGSYVVI-----DGEPCRVVEIEK---SKTGKHGSAKARIVAVGVFDGGKRTLSLPVD 65 (71)
T ss_dssp EGGGCCTTCEEEE-----TTEEEEEEEEEE---ECCSTTSCCEEEEEEEETTTCCEEEEEEETT
T ss_pred EHHHccCCCEEEE-----CCEEEEEEEEEE---ECCCCCCccEEEEEEEEeecCcEEEEEEcCC
Confidence 3457899998876 343222222221 11122 3 23567799999999999999876
No 14
>d1iz6a1 b.34.5.2 (A:2-70) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=61.36 E-value=8 Score=21.76 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=33.3
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEE--e--cC-CC-cceEEEEEeecCeeEEEEEeec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISR--R--NK-GL-NSNFIVRKISYNEGIERTFQLY 79 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~--r--~~-g~-~stftlR~i~~gvGVEr~fpl~ 79 (99)
+.-++++|.+|.+ +|+ .|. |+.. . ++ |- -....+|++..|--.|.+||-.
T Consensus 7 ~~~~lkkG~~i~~-----~g~-----p~~--V~e~~~~kpGk~G~a~~~~k~k~i~tG~~~e~~~~s~ 62 (69)
T d1iz6a1 7 QVSKLKPGRYIII-----DDE-----PCR--IVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTS 62 (69)
T ss_dssp EGGGCCTTSEEEE-----TTE-----EEE--EEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETT
T ss_pred EHhHccCCCEEEE-----CCE-----EEE--EEEEEEEcCCCcCccEEEEEEEEcccCCEEEEEEcCC
Confidence 4557899988876 242 333 3332 1 22 32 3567899999999999999866
No 15
>d1yvca1 b.40.4.12 (A:1-69) Hypothetical protein MMP0076 {Methanococcus maripaludis [TaxId: 39152]}
Probab=58.24 E-value=8.7 Score=21.56 Aligned_cols=44 Identities=20% Similarity=0.230 Sum_probs=27.0
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEE
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIE 73 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVE 73 (99)
+.| +++||++.|+...- .+.|-.|++.. +-.+-+.+.+-|.=|+
T Consensus 10 ~~p-vk~g~~~~v~I~~l--------~~~G~Giar~~---g~vvfV~~alPGe~V~ 53 (69)
T d1yvca1 10 NVP-VEAGKEYEVTIEDM--------GKGGDGIARID---GFVVFVPNAEKGSVIN 53 (69)
T ss_dssp CCS-SCTTCEEEEECCEE--------CTTSCEEEEET---TEEEEETTCCTTCEEE
T ss_pred cCC-CCCCCEEEEEEEEC--------CCCCcEEEEEC---CEEEEeCCCCCCCEEE
Confidence 444 89999999987543 23455566653 3455556656555554
No 16
>d1ib8a1 b.38.2.1 (A:91-164) Hypothetical protein SP14.3 (SP0552) {Streptococcus pneumoniae [TaxId: 1313]}
Probab=57.21 E-value=13 Score=20.68 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=32.1
Q ss_pred CCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeec
Q psy3777 24 TGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLY 79 (99)
Q Consensus 24 ~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~ 79 (99)
.|-.|.|+++-+-.++ ..|+|++.+..+ .+++|.---.+.+-+..||+.
T Consensus 13 ~G~~v~v~l~~p~~g~---k~f~G~L~~~~~----~~i~l~~~~~~~~~~~~i~~~ 61 (74)
T d1ib8a1 13 VGKYIHVGLYQAIDKQ---KVFEGTLLAFEE----DELTMEYMDKTRKKTVQIPYS 61 (74)
T ss_dssp CSEEEEEECSSCSSSC---SEEEEEEEEEET----TEEEEEEECSSCEEEEEECSS
T ss_pred CCCEEEEEEecccCCc---eEEEEEEEeecC----CeEEEEEecCcccEEEEEcHH
Confidence 6888888876542222 379999999985 567775443444556566643
No 17
>d1xjva1 b.40.4.3 (A:6-145) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.34 E-value=2.4 Score=27.36 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=25.0
Q ss_pred cCCCCCc-CCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEE
Q psy3777 16 KKNIPDF-VTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFI 62 (99)
Q Consensus 16 ~~~~p~f-~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stft 62 (99)
..++|.+ .+||+|.++=. ++|.|.|=..+..+.+. ++|.
T Consensus 61 ~~~LP~v~~~GDII~l~r~-------~v~~~~~~~~~~~~~~~-ss~~ 100 (140)
T d1xjva1 61 YEALPIIYKNGDIVRFHRL-------KIQVYKKETQGITSSGF-ASLT 100 (140)
T ss_dssp GGGSCCCCSTTCEEEEEEE-------EEEEETTEEEEEEEEEE-EEEE
T ss_pred hHHCCCCCCCCCEEEEEEE-------EEEEECCeEEEEecCCE-EEEE
Confidence 3689996 58999999742 35566665555555443 3443
No 18
>d1qzga_ b.40.4.3 (A:) Protection of telomeres protein 1, Pot1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=55.48 E-value=3.2 Score=27.94 Aligned_cols=34 Identities=9% Similarity=0.285 Sum_probs=23.6
Q ss_pred cCCCCCc-CCCCEEEEEEEEecCCceeeceEEEEEEEEecCC
Q psy3777 16 KKNIPDF-VTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKG 56 (99)
Q Consensus 16 ~~~~p~f-~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g 56 (99)
..++|.+ .+||+|.++= =++|.|.|=..+....|
T Consensus 88 ~e~LP~V~~vGDII~l~r-------vkvq~~~g~~q~v~~~~ 122 (170)
T d1qzga_ 88 GNDLPVIKQVGQPLLLHQ-------ITLRSYRDRTQGLSKDQ 122 (170)
T ss_dssp SSCSCCCCSTTCEEEEEE-------EEEEEETTEEEEEEEEE
T ss_pred hHHCCCcCCCCCEEEEEE-------EEEEEECCceEEEecCc
Confidence 4689997 6899999873 23567777666665443
No 19
>d1wi5a_ b.40.4.5 (A:) S1-domain of RRP5 protein homolog (PDCD11, KIAA0185) {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.49 E-value=17 Score=21.90 Aligned_cols=25 Identities=8% Similarity=0.157 Sum_probs=18.1
Q ss_pred CCCCcCCCCEEEEEEEEecCCceee
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
....|++||+|.+.+.-.+.++.|+
T Consensus 64 ~~~~~~vGq~v~~~V~~vd~~~~~i 88 (119)
T d1wi5a_ 64 KGAKLKVGQYLNCIVEKVKGNGGVV 88 (119)
T ss_dssp SSCCCCTTCEEEEEEEECCTTSCEE
T ss_pred HHHhcccceEEEEEEEEEeCCCCEE
Confidence 3457999999999987665544443
No 20
>d1kl9a2 b.40.4.5 (A:3-88) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.45 E-value=6.9 Score=22.33 Aligned_cols=22 Identities=14% Similarity=0.063 Sum_probs=15.3
Q ss_pred CcCCCCEEEEEEEEecCCceee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
.|++||.|++.+.-.+.++.|+
T Consensus 59 ~~~~Gd~v~~kV~~vd~~~~ki 80 (86)
T d1kl9a2 59 LIRIGRNECVVVIRVDKEKGYI 80 (86)
T ss_dssp --CTTCEEEEEEEEEETTTTEE
T ss_pred EeecccEEEEEEEEEECCCCEE
Confidence 4999999999987655555554
No 21
>d1u1za_ d.38.1.6 (A:) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.45 E-value=8.5 Score=23.85 Aligned_cols=28 Identities=14% Similarity=0.357 Sum_probs=18.5
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEE
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGI 48 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~Gv 48 (99)
-.+.|||++.+++.+.. .+...-.|+|.
T Consensus 99 ~~v~PGd~L~i~v~~~~-~~~~~~~~~~~ 126 (145)
T d1u1za_ 99 QPVLPGDQLQLHAKFIS-VKRSIWKFDCH 126 (145)
T ss_dssp SCCCTTCEEEEEEEEEE-EETTEEEEEEE
T ss_pred cccCCCCEEEEEEEEEE-eeCCEEEEEEE
Confidence 45789999999998853 23334444443
No 22
>d1vqok1 b.39.1.1 (K:1-132) Ribosomal protein L14 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=45.07 E-value=14 Score=23.57 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=28.7
Q ss_pred CCCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEec
Q psy3777 17 KNIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRN 54 (99)
Q Consensus 17 ~~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~ 54 (99)
...|.-.+||.|.|.+.-... ..+-|.+.++++.-+.
T Consensus 42 ~r~~~a~vGD~IvvsVk~~~~-~~k~~v~~AvIVrtkk 78 (132)
T d1vqok1 42 NRLPKAGLGDKITVSVTKGTP-EMRRQVLEAVVVRQRK 78 (132)
T ss_dssp TCCCEECTTCEEEEEEEEECT-TTTTCEEEEEEEECSS
T ss_pred ccccccccceEEEEEEeecCC-CcccceEEEEEEEecC
Confidence 356778899999999876433 4577999999998664
No 23
>d1wrua2 b.106.1.1 (A:3-176) Baseplate protein gpP {Bacteriophage mu [TaxId: 10677]}
Probab=44.63 E-value=19 Score=22.19 Aligned_cols=28 Identities=21% Similarity=0.477 Sum_probs=21.2
Q ss_pred CCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 19 IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 19 ~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
.+.+.||+.|.|.+ |. + ..|.|+|....
T Consensus 43 ~~~~~~G~~v~v~i----g~-~--~~~~G~v~~~~ 70 (174)
T d1wrua2 43 LSGLAPGKKFTLEI----GG-Q--IVCTGYIDSRR 70 (174)
T ss_dssp CGGGCTTCEEEEEE----TT-E--EEEEEEEEEEE
T ss_pred cccccCCCEEEEEE----cc-c--cEEEEEEEEEE
Confidence 34589999999976 43 2 47999998766
No 24
>d1hh2p1 b.40.4.5 (P:127-198) S1 domain of NusA {Thermotoga maritima [TaxId: 2336]}
Probab=44.10 E-value=8.9 Score=21.80 Aligned_cols=20 Identities=25% Similarity=0.386 Sum_probs=14.9
Q ss_pred CCCC--CcCCCCEEEEEEEEec
Q psy3777 17 KNIP--DFVTGDTIIVNLNVIE 36 (99)
Q Consensus 17 ~~~p--~f~~GD~v~V~~~i~e 36 (99)
..+| .|++||.|++-+.-.+
T Consensus 39 eqip~E~~~~Gdrik~~i~~V~ 60 (72)
T d1hh2p1 39 EWIPGEEIKAGDLVKVYIIDVV 60 (72)
T ss_dssp GSCTTCCCCTTCEEEEEEEEEE
T ss_pred HcCCCCCCCCCCEEEEEEEEEE
Confidence 3455 4999999999877543
No 25
>d1yeza1 b.40.4.12 (A:1-68) Hypothetical protein MM1357 {Methanosarcina mazei [TaxId: 2209]}
Probab=43.16 E-value=16 Score=20.15 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=26.3
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEE
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIE 73 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVE 73 (99)
.++.||.+.+++..- .+.|-.|++.. +..+-+.+.+-|.=|+
T Consensus 10 pv~~g~~~~l~I~~l--------~~~G~Gi~~~~---g~vvfV~galpGe~v~ 51 (68)
T d1yeza1 10 PVEEGEVYDVTIQDI--------ARQGDGIARIE---GFVIFVPGTKVGDEVR 51 (68)
T ss_dssp SCCTTEEEEEECCEE--------ETTTEEEEEET---TEEEEEESCCTTCEEE
T ss_pred CcCCCCEEEEEEEEC--------CCCCcEEEEEC---CEEEEeCCCCCCCEEE
Confidence 479999999887543 23355566553 3555566666665554
No 26
>d2bi0a1 d.38.1.4 (A:8-185) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=42.83 E-value=6.4 Score=25.43 Aligned_cols=17 Identities=24% Similarity=0.245 Sum_probs=14.5
Q ss_pred CCcCCCCEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~e 36 (99)
-..++||+|.+++.|.+
T Consensus 94 ~PV~~GDTl~~~~eV~~ 110 (178)
T d2bi0a1 94 RFPAVGDTLYTRTEVVG 110 (178)
T ss_dssp SCCBTTCEEEEEEEEEE
T ss_pred eeccCCCEEEEEEEEEE
Confidence 35899999999999874
No 27
>d1dzfa2 d.78.1.1 (A:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.07 E-value=6.9 Score=22.46 Aligned_cols=12 Identities=8% Similarity=0.241 Sum_probs=9.8
Q ss_pred CcCCCCEEEEEE
Q psy3777 21 DFVTGDTIIVNL 32 (99)
Q Consensus 21 ~f~~GD~v~V~~ 32 (99)
.++|||+++++-
T Consensus 46 g~~~GdvikI~R 57 (72)
T d1dzfa2 46 GLKRGEVVKIIR 57 (72)
T ss_dssp TCCTTCEEEEEC
T ss_pred CCCCCCEEEEEE
Confidence 478999999974
No 28
>d1hmja_ d.78.1.1 (A:) RNA polymerase subunit RBP5 (RNA polymerase subunit H) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=40.20 E-value=6.9 Score=22.21 Aligned_cols=13 Identities=23% Similarity=0.187 Sum_probs=10.7
Q ss_pred CcCCCCEEEEEEE
Q psy3777 21 DFVTGDTIIVNLN 33 (99)
Q Consensus 21 ~f~~GD~v~V~~~ 33 (99)
.+++||+|+++=.
T Consensus 39 g~k~GdvvkI~R~ 51 (68)
T d1hmja_ 39 GAKEGDVVRVIRK 51 (68)
T ss_pred CCCCCcEEEEEEc
Confidence 5899999999754
No 29
>d1uwva1 b.40.4.12 (A:15-74) rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=39.08 E-value=25 Score=18.68 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=20.6
Q ss_pred CCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 19 IPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 19 ~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
+|.--|||+|+|.+.- .+-+...|-++.+-
T Consensus 27 V~~alPGE~V~v~i~~-----~~~~~~~a~~~eil 56 (60)
T d1uwva1 27 IPGLLPQENAEVTVTE-----DKKQYARAKVVRRL 56 (60)
T ss_dssp EETCCTTCEEEEEEEE-----ECSSEEEEEEEEEC
T ss_pred ECCCCCCCEEEEEEEE-----ecCCeEEEEEEEEe
Confidence 3556699999998853 33356777777654
No 30
>d1z6ba1 d.38.1.6 (A:84-229) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=38.53 E-value=16 Score=22.53 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.8
Q ss_pred CCcCCCCEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVI 35 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~ 35 (99)
-...|||++.+.+.+.
T Consensus 98 ~~v~PGd~l~i~~~i~ 113 (146)
T d1z6ba1 98 KPVLPGDTLTMQANLI 113 (146)
T ss_dssp SCCCTTCEEEEEEEEE
T ss_pred ceEecCCEEEEEEEEE
Confidence 3467999999998874
No 31
>d1hr0w_ b.40.4.5 (W:) Translational initiation factor 1, IF1 {Escherichia coli [TaxId: 562]}
Probab=38.48 E-value=6.6 Score=22.57 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=18.1
Q ss_pred cCCCCCcCCCCEEEEEEEEecCCceee
Q psy3777 16 KKNIPDFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 16 ~~~~p~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
++.--.+.+||.|.|.++--+-+|-|+
T Consensus 41 Rk~ri~i~~GD~V~Vel~pyd~~kgrI 67 (71)
T d1hr0w_ 41 RMHYIRILPGDRVVVEITPYDPTRGRI 67 (71)
T ss_dssp HHTCCCCCTTCEEEEECCTTCTTCCEE
T ss_pred heeeEEecCCCEEEEEECccCCCcEEE
Confidence 344456899999999986544444443
No 32
>d3bzka4 b.40.4.5 (A:637-730) Tex S1-domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.66 E-value=15 Score=21.26 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=15.6
Q ss_pred cCCCCEEEEEEEEecCCceee
Q psy3777 22 FVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 22 f~~GD~v~V~~~i~eg~k~r~ 42 (99)
|++||.|++.+.-.+.++.|+
T Consensus 63 ~~vGq~v~~~V~~id~~~~~i 83 (94)
T d3bzka4 63 VKAGDIVKVKVMEVDIPRNRV 83 (94)
T ss_dssp CCTTCEEEEEEEEEETTTTEE
T ss_pred hccCcEEEEEEEEEECCCCEE
Confidence 999999999977655444443
No 33
>d2qdyb1 b.34.4.4 (B:1-211) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=37.21 E-value=7.3 Score=26.72 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=25.7
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceE----EEEEEE-Eec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAY----EGIVIS-RRN 54 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f----~GvvIa-~r~ 54 (99)
+-|.|.+||.|+|.-...- .-+|+..| .|+|.. ..+
T Consensus 119 ~~p~F~vGd~Vrv~~~~~~-gHtRlP~Y~rgk~G~I~~~~~g 159 (211)
T d2qdyb1 119 ETTTFEVGQRVRVRDEYVP-GHIRMPAYCRGRVGTISHRTTE 159 (211)
T ss_dssp SCCCCCTTCEEEECCCCCS-SCCSCCGGGTTCEEEEEEECSS
T ss_pred CCCcCCCCCEEEEccCCCC-CccccchhhcCCeEEEEeeccC
Confidence 4578999999999865543 36777766 688763 444
No 34
>d1pk6a_ b.22.1.1 (A:) Complement c1q globular head, A chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.06 E-value=18 Score=21.31 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=19.7
Q ss_pred CcCCCCEEEEEEEEecCC----ceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEGT----RKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~----k~r~q~f~GvvI 50 (99)
++..||.|.|.+....+. -..-..|.|..|
T Consensus 97 ~L~agD~V~v~~~~~~~~~~~~~~~~s~FsG~Li 130 (133)
T d1pk6a_ 97 QLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLI 130 (133)
T ss_dssp EECTTCEEEEEEEEEEECCCCSSSCCCEEEEEEE
T ss_pred EcCCcCEEEEEEECCCceEecCCCCcEEEEEEEE
Confidence 478999999987653221 233356888876
No 35
>d2z1ca1 b.40.14.1 (A:2-72) Hydrogenase expression/formation protein HypC {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=37.02 E-value=9.8 Score=21.79 Aligned_cols=14 Identities=43% Similarity=0.695 Sum_probs=12.3
Q ss_pred CCCcCCCCEEEEEE
Q psy3777 19 IPDFVTGDTIIVNL 32 (99)
Q Consensus 19 ~p~f~~GD~v~V~~ 32 (99)
+|+.+|||.|-||.
T Consensus 32 v~e~~vGDyVLVh~ 45 (71)
T d2z1ca1 32 MPDTKPGDWVIVHT 45 (71)
T ss_dssp STTCCTTCEEEEET
T ss_pred eCCCCCCCEEEEee
Confidence 48899999999985
No 36
>d2ahob2 b.40.4.5 (B:1-84) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=35.85 E-value=12 Score=20.92 Aligned_cols=21 Identities=10% Similarity=0.284 Sum_probs=15.3
Q ss_pred cCCCCEEEEEEEEecCCceee
Q psy3777 22 FVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 22 f~~GD~v~V~~~i~eg~k~r~ 42 (99)
|++||.|++.+.-.+.++.|+
T Consensus 58 ~~~G~~v~~kV~~vd~~~~~i 78 (84)
T d2ahob2 58 LKENRKVIVKVIRVDRRKGTV 78 (84)
T ss_dssp TCSSCEEECEEEEEETTTTEE
T ss_pred eecccEEEEEEEEEECCCCEE
Confidence 899999999987654444443
No 37
>d1ah9a_ b.40.4.5 (A:) Translational initiation factor 1, IF1 {Escherichia coli [TaxId: 562]}
Probab=35.29 E-value=8.4 Score=22.08 Aligned_cols=26 Identities=31% Similarity=0.484 Sum_probs=17.5
Q ss_pred cCCCCCcCCCCEEEEEEEEecCCcee
Q psy3777 16 KKNIPDFVTGDTIIVNLNVIEGTRKR 41 (99)
Q Consensus 16 ~~~~p~f~~GD~v~V~~~i~eg~k~r 41 (99)
++.--.+.+||.|.|.++--+-+|-|
T Consensus 40 rk~ri~i~~GD~V~Vel~pyd~~kgr 65 (71)
T d1ah9a_ 40 RKNYIRILTGDKVTVELTPYDLSKGR 65 (71)
T ss_dssp GGTTCCCCTTCEECCEECSSCTTEEE
T ss_pred heeEEEecCCCEEEEEECccCCCcEE
Confidence 34445699999999998654434433
No 38
>d1c3ha_ b.22.1.1 (A:) 30 kDa adipocyte complement-related protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.19 E-value=26 Score=21.11 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=21.2
Q ss_pred CCcCCCCEEEEEEEEecC------CceeeceEEEEEEE
Q psy3777 20 PDFVTGDTIIVNLNVIEG------TRKRIQAYEGIVIS 51 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg------~k~r~q~f~GvvIa 51 (99)
-++.+||.|.|.+....+ +...-..|.|..|-
T Consensus 96 l~L~agD~V~v~~~~~~~~~~~~~~~~~~s~FsGyLi~ 133 (137)
T d1c3ha_ 96 LHLEVGDQVWLQVYGDGDHNGLYADNVNDSTFTGFLLY 133 (137)
T ss_dssp EEECTTCEEEEEEEEECTTCCCCCCCCCCCEEEEEEEE
T ss_pred EEcCCCCEEEEEEEeCCCcceEEcCCCCcEEEEEEEEe
Confidence 357899999998865421 11233579998774
No 39
>d2ix0a3 b.40.4.5 (A:558-644) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=33.88 E-value=14 Score=21.51 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=16.8
Q ss_pred CcCCCCEEEEEEEEecCCceee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
.|+.||.|+|.+.-.+..+.++
T Consensus 60 ~~~~Gd~V~V~v~~vd~~~r~I 81 (87)
T d2ix0a3 60 VYKVTDVIDVTIAEVRMETRSI 81 (87)
T ss_dssp EEETTCEEEEEEEEEETTTTEE
T ss_pred EEECCCEEEEEEEEEecccCeE
Confidence 5999999999988765555444
No 40
>d1eika_ d.78.1.1 (A:) RNA polymerase subunit RBP5 (RNA polymerase subunit H) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.87 E-value=9.8 Score=22.02 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=10.5
Q ss_pred CcCCCCEEEEEEE
Q psy3777 21 DFVTGDTIIVNLN 33 (99)
Q Consensus 21 ~f~~GD~v~V~~~ 33 (99)
.+++||+|+++=.
T Consensus 50 g~k~GdvvkI~R~ 62 (77)
T d1eika_ 50 GAKRGDIVKIIRK 62 (77)
T ss_dssp GCCTTCEEEEEEE
T ss_pred CCcCCcEEEEEEc
Confidence 3689999999764
No 41
>d2bi0a2 d.38.1.4 (A:186-337) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.36 E-value=41 Score=21.03 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=14.6
Q ss_pred CCcCCCCEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~e 36 (99)
-++.+||+|.+.+.+.+
T Consensus 96 ~PV~~GDti~~~~eV~~ 112 (152)
T d2bi0a2 96 APVHEGDTLYSELHIES 112 (152)
T ss_dssp SCCCTTCEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEE
Confidence 36899999999999964
No 42
>d1iq6a_ d.38.1.4 (A:) (R)-specific enoyl-CoA hydratase {Aeromonas caviae [TaxId: 648]}
Probab=33.35 E-value=13 Score=22.24 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=13.6
Q ss_pred CcCCCCEEEEEEEEec
Q psy3777 21 DFVTGDTIIVNLNVIE 36 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~e 36 (99)
++.|||+|.++..+.+
T Consensus 85 Pv~~GDtl~~~~~v~~ 100 (132)
T d1iq6a_ 85 PVFVGDEVTAEVEVTA 100 (132)
T ss_dssp CCBTTCEEEEEEEEEE
T ss_pred cCCCcCEEEEEEEEEE
Confidence 4789999999998864
No 43
>d1q6wa_ d.38.1.4 (A:) Monoamine oxidase regulatory protein {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=33.32 E-value=15 Score=22.28 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=13.7
Q ss_pred CCcCCCCEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~e 36 (99)
-.+.+||+|.++..+.+
T Consensus 97 ~Pv~~GDtl~~~~~V~~ 113 (151)
T d1q6wa_ 97 RPVFIGDTIAASAEVVE 113 (151)
T ss_dssp SCCBTTCEEEEEEEEEE
T ss_pred cccCCCCEEEEEEEEEE
Confidence 35789999999988763
No 44
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.18 E-value=9.7 Score=21.29 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=10.3
Q ss_pred CcCCCCEEEEEE
Q psy3777 21 DFVTGDTIIVNL 32 (99)
Q Consensus 21 ~f~~GD~v~V~~ 32 (99)
.|+.||+|.|.-
T Consensus 28 sf~~GD~i~Vl~ 39 (69)
T d1gcqc_ 28 RLNPGDIVELTK 39 (69)
T ss_dssp CBCTTCEEEEEE
T ss_pred eEcCCCEEEEEE
Confidence 599999999963
No 45
>d2je6i1 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=32.60 E-value=38 Score=18.85 Aligned_cols=30 Identities=23% Similarity=0.343 Sum_probs=20.4
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCC
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGL 57 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~ 57 (99)
.|++||.|.+.+.-.+.+ .+ +.++.|..|+
T Consensus 54 ~~~~Gd~v~~kV~~vd~~-~~------i~LS~k~~~l 83 (87)
T d2je6i1 54 YLDVGDYVIARIENFDRS-ID------PVLSVKGKDL 83 (87)
T ss_dssp SCCTTCEEEEEEEEEETT-EE------EEEECCSTTC
T ss_pred hhcccceEEEEEEEECCC-CC------EEEEEecCCC
Confidence 499999999998654322 11 5567776655
No 46
>d1jb7a2 b.40.4.3 (A:205-328) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=32.58 E-value=15 Score=23.31 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=16.5
Q ss_pred cCCCCCcCCCCEEEEEEEE
Q psy3777 16 KKNIPDFVTGDTIIVNLNV 34 (99)
Q Consensus 16 ~~~~p~f~~GD~v~V~~~i 34 (99)
+..+|-++.||+|++..-.
T Consensus 55 k~KFPhl~~G~vvRIRSat 73 (124)
T d1jb7a2 55 KLKFPHVRTGEVVRIRSAT 73 (124)
T ss_dssp TTTCTTCCTTCEEEEEEEE
T ss_pred hhcCCccccCceEEEEeee
Confidence 5789999999999998754
No 47
>d2rdea1 b.45.2.1 (A:138-247) Hypothetical protein VCA0042, C-terminal domain {Vibrio cholerae O395 [TaxId: 345073]}
Probab=32.17 E-value=22 Score=22.11 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=24.5
Q ss_pred CCCCcCCCCEEEEEEEEecCCceeeceEEEEEEEEec
Q psy3777 18 NIPDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRN 54 (99)
Q Consensus 18 ~~p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~ 54 (99)
.-+.|.+||-|.+.+.....+..-+.+..|+|=.-.+
T Consensus 38 ~sr~~qvgd~v~l~v~~~~~g~~~~~PL~G~icnlQk 74 (110)
T d2rdea1 38 LGKTYQVGDLVALEIFSDLRGTKTFPPLTGKICNLQR 74 (110)
T ss_dssp TSCCCCTTCEEEEEEBSSTTSSCBCSCEEEEEEEEEE
T ss_pred CCCceecCCeEEEEEEcCCCCCcccCCccceeecchh
Confidence 3467999998888876543222344588898766554
No 48
>d1pk6c_ b.22.1.1 (C:) Complement c1q globular head, C chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.16 E-value=25 Score=20.81 Aligned_cols=30 Identities=10% Similarity=0.282 Sum_probs=18.7
Q ss_pred CcCCCCEEEEEEEEecCC---ceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEGT---RKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~---k~r~q~f~GvvI 50 (99)
++.+||.|.|.+.-..+. -..-..|.|..|
T Consensus 94 ~L~agD~V~v~~~~~~~~~~~~~~~s~FsGyLl 126 (129)
T d1pk6c_ 94 RLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLL 126 (129)
T ss_dssp EECTTCEEEEEEEEEECCCCCTTCCCEEEEEEE
T ss_pred ECCCCCEEEEEEECCcceecCCCCceEEEEEEE
Confidence 578999999887653221 112245888766
No 49
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]}
Probab=32.15 E-value=16 Score=22.98 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=17.4
Q ss_pred cCeeEEEEEeecCCccceEEEEEe
Q psy3777 68 YNEGIERTFQLYSPIISSIIVKRR 91 (99)
Q Consensus 68 ~gvGVEr~fpl~SP~I~~I~V~~~ 91 (99)
+|++| .|-++||.-++|+++=-
T Consensus 14 ~g~~v--~F~vwAp~A~~V~L~ly 35 (162)
T d1bf2a1 14 QQANI--TFRVYSSQATRIVLYLY 35 (162)
T ss_dssp TSSEE--EEEEECSSCSEEEEEEE
T ss_pred CCeeE--EEEEECCCCCEEEEEEE
Confidence 45555 89999999999988753
No 50
>d1gr3a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Human (Homo sapiens), isoform X [TaxId: 9606]}
Probab=31.94 E-value=12 Score=22.31 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=17.4
Q ss_pred CcCCCCEEEEEEEEecC-----CceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEG-----TRKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg-----~k~r~q~f~GvvI 50 (99)
++.+||.|.|.+.-..+ ....-..|.|..|
T Consensus 95 ~L~agD~V~v~~~~~~~~~~~~~~~~~s~F~GyLi 129 (132)
T d1gr3a_ 95 DLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV 129 (132)
T ss_dssp EECTTCEEEEECCCTTSEEEECCSSSCCEEEEEEE
T ss_pred EcCCCCEEEEEEEcCCceeEEcCCCCcEEEEEEEE
Confidence 57899999887532111 1112245888776
No 51
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]}
Probab=31.90 E-value=19 Score=20.59 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=16.2
Q ss_pred CCCCCcCCCCEEEEEEEEec
Q psy3777 17 KNIPDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 17 ~~~p~f~~GD~v~V~~~i~e 36 (99)
..+|.|.||.-|.+.+.+..
T Consensus 32 ~~~~~~~pGQ~v~l~~~~~~ 51 (107)
T d1gvha2 32 GAVAEYRPGQYLGVWLKPEG 51 (107)
T ss_dssp CCCCCCCTTCEEEEEECCTT
T ss_pred CcccCCCCCCEEEEEeeccc
Confidence 46789999999999887643
No 52
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=31.55 E-value=14 Score=22.14 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=17.2
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvI 50 (99)
.|+.||+|.|.-...+ .=+.|-+.
T Consensus 46 sF~~GDii~v~~~~d~------~WW~gr~~ 69 (96)
T d1t0ha_ 46 SFEAKDFLHVKEKFNN------DWWIGRLV 69 (96)
T ss_dssp CBCTTCEEEEEEECSS------SEEEEEES
T ss_pred cCCCCCEEEEeeeeCC------CceEEEEc
Confidence 5999999999766543 26666543
No 53
>d1d1na_ b.43.3.1 (A:) Initiation factor IF2/eIF5b, domains 2 and 4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.88 E-value=14 Score=22.37 Aligned_cols=16 Identities=38% Similarity=0.503 Sum_probs=13.0
Q ss_pred CCCCCcCCCCEEEEEE
Q psy3777 17 KNIPDFVTGDTIIVNL 32 (99)
Q Consensus 17 ~~~p~f~~GD~v~V~~ 32 (99)
.+..+|.+||+|...-
T Consensus 77 ~~~~d~~~GD~ie~y~ 92 (99)
T d1d1na_ 77 KNFNDIKEGDVIEAYV 92 (99)
T ss_dssp TTCSSCSSCSEEEEEC
T ss_pred cCccCCCCCCEEEEEE
Confidence 4678999999998743
No 54
>d2c2ia1 d.38.1.4 (A:2-150) Hypothetical protein Rv0130 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.19 E-value=29 Score=21.07 Aligned_cols=17 Identities=6% Similarity=0.178 Sum_probs=14.4
Q ss_pred CCcCCCCEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~e 36 (99)
-++.+||+|.++..+.+
T Consensus 97 ~PV~~GDti~~~~~V~~ 113 (149)
T d2c2ia1 97 APVPVGSRVRATSSLVG 113 (149)
T ss_dssp SCCBTTCEEEEEEEEEE
T ss_pred ccEeeCceEEEEEEEEE
Confidence 35899999999998864
No 55
>d1h9ra2 b.40.6.2 (A:200-261) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=29.64 E-value=34 Score=18.50 Aligned_cols=22 Identities=9% Similarity=0.187 Sum_probs=19.0
Q ss_pred ceEEEEEEEEecCCCcceEEEE
Q psy3777 43 QAYEGIVISRRNKGLNSNFIVR 64 (99)
Q Consensus 43 q~f~GvvIa~r~~g~~stftlR 64 (99)
+.|.|.|.+++..+.++-++++
T Consensus 2 N~l~G~V~~I~~g~v~aeV~l~ 23 (62)
T d1h9ra2 2 NQLPGIISHIERGAEQCEVLMA 23 (62)
T ss_dssp EEEEEEEEEEECCSSEEEEEEE
T ss_pred CeeEEEEEEEEECCCceEEEEE
Confidence 4799999999998888888885
No 56
>d2ba0a1 b.40.4.5 (A:53-135) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=29.48 E-value=23 Score=19.61 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=20.4
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCC
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGL 57 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~ 57 (99)
.|++||.|.+.+.-.+.+ . -+.++.|..++
T Consensus 50 ~~~vGd~V~~kV~~vd~~-~------~i~LS~k~~~~ 79 (83)
T d2ba0a1 50 VLDIGDAIIAKVLNIDPK-M------KVTLTMKDRIC 79 (83)
T ss_dssp TCCTTCEEEEEEEEECTT-C------CEEEECCSSSC
T ss_pred hcccccEEEEEEEEECCC-C------CEEEEecCCCC
Confidence 499999999998765322 2 25566666554
No 57
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=28.84 E-value=52 Score=19.21 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=39.7
Q ss_pred cCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeecCCc
Q psy3777 22 FVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLYSPI 82 (99)
Q Consensus 22 f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~SP~ 82 (99)
+.||+.+.+.+.+.+.... ....+.+-.---.|...+...-.+--|.-.+-.|.+..|.
T Consensus 13 v~pG~~~~~~vtVtN~g~~--~~~~~~~~~~~P~GW~v~~~~~~L~pG~s~~~~~~Vt~p~ 71 (103)
T d1w8oa1 13 LEPGQQVTVPVAVTNQSGI--AVPKPSLQLDASPDWQVQGSVEPLMPGRQAKGQVTITVPA 71 (103)
T ss_dssp ECTTCEEEEEEEEECCSSS--CBSSCEEEEECCTTSEEEEEECCBCTTCEEEEEEEEECCT
T ss_pred eCCCCeEEEEEEEEeCCCC--ceeeeeEEEcCCCCccccCcceeeCCCCcEEEEEEEECCC
Confidence 7899999999999743211 1122222223357887777766677888888888888874
No 58
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.49 E-value=18 Score=20.04 Aligned_cols=24 Identities=13% Similarity=0.236 Sum_probs=16.5
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvI 50 (99)
.|+.||+|.|.-...+ .=+.|.+-
T Consensus 25 s~~~Gd~i~Vl~~~~~------~Ww~g~~~ 48 (80)
T d1ue9a_ 25 SLAPGQLILILKKNTS------GWWQGELQ 48 (80)
T ss_dssp CCCTTCEEEEEEECSS------SEEEEEEC
T ss_pred eEcCCCEEEEEEEeCC------CeEEEEEc
Confidence 6999999999765432 25666553
No 59
>d1ueba1 b.34.5.2 (A:1-63) Elongation factor P N-terminal domain {Thermus thermophilus HB8 [TaxId: 300852]}
Probab=28.44 E-value=43 Score=18.08 Aligned_cols=51 Identities=18% Similarity=0.313 Sum_probs=31.4
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCC-CcceEEEEEeecCeeEEEEEee
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKG-LNSNFIVRKISYNEGIERTFQL 78 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g-~~stftlR~i~~gvGVEr~fpl 78 (99)
-++++|.++.. +|+-=.+-.|+ ...-++| --....+||+..|.=+|.+|.-
T Consensus 5 ~elkkG~~i~~-----~g~~~~V~~~~---~~kpgkg~a~v~~Klknl~tG~~~e~tf~~ 56 (63)
T d1ueba1 5 TDLRPGTKVKM-----DGGLWECVEYQ---HQKLGRGGAKVVAKFKNLETGATVERTFNS 56 (63)
T ss_dssp GGCCTTCEEEE-----TTEEEEEEEEE---EEEETTSCCEEEEEEEESSSSCEEEEEEET
T ss_pred HHCCCCCEEEE-----CCEEEEEEEEE---EEcCCCCceEEEEEEEEcCCCCEEEEEECC
Confidence 47899998875 24322222222 2222333 2445569999999999999964
No 60
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=28.07 E-value=15 Score=24.01 Aligned_cols=16 Identities=44% Similarity=0.673 Sum_probs=13.3
Q ss_pred cCCCCC--cCCCCEEEEE
Q psy3777 16 KKNIPD--FVTGDTIIVN 31 (99)
Q Consensus 16 ~~~~p~--f~~GD~v~V~ 31 (99)
+-++|. ++|||+|.|.
T Consensus 84 ~v~iPSy~vk~GDvIsvk 101 (159)
T d1c06a_ 84 RVNIPSYRVKPGQTIAVR 101 (159)
T ss_dssp ECCCSSCCCCSSCEEEEC
T ss_pred EEEecceeecCCcEEeec
Confidence 468897 7999999985
No 61
>d2as0a1 b.122.1.9 (A:1-72) Hypothetical protein PH1915, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.92 E-value=16 Score=20.11 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=23.9
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeec
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISY 68 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~ 68 (99)
.+|.+||+|.|.- .+| .|-|..+. +.+|.+.+|=+..
T Consensus 31 g~~~~Gd~V~v~d--~~g------~~lg~G~~----n~~S~i~~Rils~ 67 (72)
T d2as0a1 31 GDIKPGDIVEVYT--RGG------KFLGKGFA----NPNSNIMVRIVTK 67 (72)
T ss_dssp SCCCTTCEEEEEE--TTC------CEEEEEEE----CTTSSEEEEEEES
T ss_pred CCcCCCcEEEEEe--CCC------cEEEEEEE----CCCCHHHHHHhcC
Confidence 4799999999963 222 56665554 3467777765543
No 62
>d2asba1 b.40.4.5 (A:108-183) S1 domain of NusA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.81 E-value=27 Score=19.81 Aligned_cols=20 Identities=10% Similarity=0.383 Sum_probs=15.2
Q ss_pred CCCC--CcCCCCEEEEEEEEec
Q psy3777 17 KNIP--DFVTGDTIIVNLNVIE 36 (99)
Q Consensus 17 ~~~p--~f~~GD~v~V~~~i~e 36 (99)
..+| .|++||.|++-+.-.+
T Consensus 43 eqip~E~y~~Gdrik~~i~~V~ 64 (76)
T d2asba1 43 EQVPGESYEHGNRLRCYVVGVT 64 (76)
T ss_dssp GSCTTCCCCTTCEEEEEEEEEE
T ss_pred HcCCCcccCCCCEEEEEEEEEE
Confidence 4456 4999999999877654
No 63
>d2ifra1 b.29.1.20 (A:1-206) Scytalidopepsin B {Fungus (Scytalidium lignicola) [TaxId: 5539]}
Probab=27.68 E-value=76 Score=21.33 Aligned_cols=40 Identities=10% Similarity=0.275 Sum_probs=25.5
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEecCCCcceEEEEEeecCeeEEEEEeec
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRNKGLNSNFIVRKISYNEGIERTFQLY 79 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~~g~~stftlR~i~~gvGVEr~fpl~ 79 (99)
++.|||.|.|++.-..+ -.-+++|-|...|.-+-+++...
T Consensus 82 ~v~~GD~i~~~V~~~s~-------------------~~g~~ti~N~stg~t~t~t~s~~ 121 (206)
T d2ifra1 82 TISEGDSIQMSVTATSD-------------------TSGSATLENLTTGQKVSKSFSNE 121 (206)
T ss_dssp CCCTTCEEEEEEEEEET-------------------TEEEEEEEETTTTEEEEEEECCC
T ss_pred ccCCCCEEEEEEEEcCC-------------------CcEEEEEEECCCCeEEEEEEecC
Confidence 67899999999864322 12245566666666666666443
No 64
>d1go3e1 b.40.4.5 (E:79-184) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=27.64 E-value=21 Score=21.05 Aligned_cols=22 Identities=18% Similarity=0.167 Sum_probs=15.1
Q ss_pred CcCCCCEEEEEEEEecCCceee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
.|++||.|+|.+.-.+-+++|+
T Consensus 57 ~~~~Gd~v~vkV~~vd~~~~~~ 78 (106)
T d1go3e1 57 VLEIGDYVRARIVAISLKAERK 78 (106)
T ss_dssp EECTTCEEEEEEEEEECCC---
T ss_pred ceeecceEEEEEEEEchhhccc
Confidence 5999999999988654445443
No 65
>d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.52 E-value=13 Score=20.89 Aligned_cols=27 Identities=26% Similarity=0.505 Sum_probs=20.4
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEEEEEEEEec
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRRN 54 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r~ 54 (99)
.|++||-|+|- .| |-+--.|+|+...+
T Consensus 10 ~F~~GDhVkVi----~G---~~~g~tGlVV~v~~ 36 (62)
T d2do3a1 10 YFKMGDHVKVI----AG---RFEGDTGLIVRVEE 36 (62)
T ss_dssp SCCTTCEEEES----SS---TTTTCEEEEEEECS
T ss_pred ccCCCCeEEEe----cc---EEcCccEEEEEEeC
Confidence 59999999984 24 34566799999874
No 66
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.42 E-value=16 Score=19.17 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=11.2
Q ss_pred CCcCCCCEEEEEEE
Q psy3777 20 PDFVTGDTIIVNLN 33 (99)
Q Consensus 20 p~f~~GD~v~V~~~ 33 (99)
-.|..||+|.|--.
T Consensus 17 Ls~~~Gd~v~vl~~ 30 (53)
T d1wlpb1 17 VSLLEGEAVEVIHK 30 (53)
T ss_dssp CCBCTTCEEEEEEC
T ss_pred ecCCCCCEEEEEee
Confidence 36999999999644
No 67
>g1y43.1 b.29.1.20 (A:1-32,B:3-173) Aspergillopepsin II {Aspergillus niger [TaxId: 5061]}
Probab=25.55 E-value=86 Score=20.85 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=12.7
Q ss_pred CcCCCCEEEEEEEEe
Q psy3777 21 DFVTGDTIIVNLNVI 35 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~ 35 (99)
.+.|||+|.+++.-.
T Consensus 86 ~v~~GD~i~~~V~~~ 100 (203)
T g1y43.1 86 TISEGDSIKVTVEAT 100 (203)
T ss_dssp CCCTTCEEEEEEEEE
T ss_pred cCCCCCEEEEEEEEc
Confidence 689999999998643
No 68
>d2ey4a1 b.122.1.1 (A:253-336) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.34 E-value=17 Score=20.72 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=16.8
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
++|++||.|.|.. ..| .+-|+-++.-
T Consensus 30 ~~f~~Gd~V~I~~--~~g------~~iavG~a~~ 55 (84)
T d2ey4a1 30 AGIKRGDLVAIMT--LKD------ELVALGKAMM 55 (84)
T ss_dssp TTCCTTCEEEEEE--TTS------CEEEEEEESS
T ss_pred CCCCCCCEEEEEe--CCC------ceEEEEEEee
Confidence 5799999998853 122 3556666544
No 69
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.19 E-value=27 Score=21.72 Aligned_cols=16 Identities=13% Similarity=0.073 Sum_probs=13.1
Q ss_pred CCcCCCCEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVI 35 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~ 35 (99)
-.|+.||+|.|.-...
T Consensus 47 LsF~kGDii~V~~~~d 62 (145)
T d1vyva1 47 VSFDAKDFLHIKEKYN 62 (145)
T ss_dssp CCBCTTCEEEEEEEEE
T ss_pred ccCcCCCEEEEeeccC
Confidence 3699999999987654
No 70
>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=25.18 E-value=60 Score=18.70 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=20.8
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
-+.++||.|..+..+.. ...|...++.-|-...
T Consensus 66 ~pv~~Gd~l~a~a~v~~-~~~~~~~~~v~v~~~~ 98 (111)
T d2f41a1 66 RQVKQGERVVAKAKVTA-VEKEKGRTVVEVNSYV 98 (111)
T ss_dssp SCCBTTCEEEEEEEEEE-ECSSSSCEEEEEEEEE
T ss_pred EccccCceEEEEEEEEE-ECCcEEEEEEEEEEEE
Confidence 45789999988887753 2345556655554433
No 71
>d2j01o1 b.39.1.1 (O:1-122) Ribosomal protein L14 {Thermus thermophilus [TaxId: 274]}
Probab=25.03 E-value=47 Score=20.52 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=25.0
Q ss_pred CCcCCCCEEEEEEEEecC--CceeeceEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIEG--TRKRIQAYEGIVISRRN 54 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg--~k~r~q~f~GvvIa~r~ 54 (99)
+.-.+||+|.|.+.-... .-++-|.+.++++.-+.
T Consensus 31 ~~a~vGD~I~vsVkk~~~~~~vkkg~v~~AvIVrtkk 67 (122)
T d2j01o1 31 KYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKK 67 (122)
T ss_dssp CCCCTTCEEEEEEEECCTTCSSCSSCEEEEEEEECSS
T ss_pred cccccCcEEEEEEeecccCCccccCcCcceeEEeeec
Confidence 446799999999865321 12456799999998664
No 72
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.80 E-value=18 Score=22.35 Aligned_cols=15 Identities=20% Similarity=0.532 Sum_probs=12.3
Q ss_pred CcCCCCEEEEEEEEe
Q psy3777 21 DFVTGDTIIVNLNVI 35 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~ 35 (99)
.|+|||+|+-.+.-.
T Consensus 61 ~fr~GDiV~A~Vis~ 75 (125)
T d2nn6i1 61 SFRPGDIVLAKVISL 75 (125)
T ss_dssp TCCSSSEEEEEEEEE
T ss_pred hcCCCCEEEEEEEEc
Confidence 499999999888643
No 73
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=24.57 E-value=58 Score=18.43 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=15.9
Q ss_pred CCCCCcCCCCEEEEEEEEec
Q psy3777 17 KNIPDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 17 ~~~p~f~~GD~v~V~~~i~e 36 (99)
..++.|.||.-|.|.+.+.+
T Consensus 30 ~~~~~~~~GQ~v~l~~~~~~ 49 (111)
T d1cqxa2 30 GPVVNFEPGQYTSVAIDVPA 49 (111)
T ss_dssp CCCCCCCTTCEEEEEEEETT
T ss_pred CcccCCCCCCEEEEEeecCC
Confidence 35678999999999987653
No 74
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=24.26 E-value=19 Score=21.81 Aligned_cols=37 Identities=14% Similarity=0.416 Sum_probs=27.3
Q ss_pred CCCcCCCCEEEEEEEEecCC------ceeeceEEEEEEEEecCCCc
Q psy3777 19 IPDFVTGDTIIVNLNVIEGT------RKRIQAYEGIVISRRNKGLN 58 (99)
Q Consensus 19 ~p~f~~GD~v~V~~~i~eg~------k~r~q~f~GvvIa~r~~g~~ 58 (99)
+-.|++||.|.+... ++ -.|.|=-.|.|+..++++..
T Consensus 30 l~~y~~GD~V~I~id---psv~kGmPh~~yhGkTG~V~~~~g~a~~ 72 (95)
T d1vqoq1 30 VEEFDDGEKVHLKID---PSVPNGRFHPRFDGQTGTVEGKQGDAYK 72 (95)
T ss_dssp HCCCCTTCEEEECCC---TTCCSSCCCGGGTTCEEEEEEEETTEEE
T ss_pred eeeccCCCEEEEEec---CCeecCccceeecCCceeEEeecCeEEE
Confidence 457999999988653 33 35677789999999876543
No 75
>d1o91a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Mouse (Mus musculus), isoform VIII [TaxId: 10090]}
Probab=24.09 E-value=16 Score=21.91 Aligned_cols=14 Identities=14% Similarity=0.356 Sum_probs=10.8
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
++.+||+|.|.+..
T Consensus 94 ~L~agD~V~v~~~~ 107 (131)
T d1o91a_ 94 LLRPGDQVFLQMPS 107 (131)
T ss_dssp EECTTCEEEEECCC
T ss_pred EcCCCCEEEEEEEc
Confidence 67899998887643
No 76
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.05 E-value=19 Score=19.08 Aligned_cols=13 Identities=31% Similarity=0.386 Sum_probs=10.9
Q ss_pred CcCCCCEEEEEEE
Q psy3777 21 DFVTGDTIIVNLN 33 (99)
Q Consensus 21 ~f~~GD~v~V~~~ 33 (99)
.|+.||+|.|.-.
T Consensus 20 sf~~Gd~i~v~~~ 32 (58)
T d1uj0a_ 20 TFKHGELITVLDD 32 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEeEE
Confidence 7999999998644
No 77
>d1pk6b_ b.22.1.1 (B:) Complement c1q globular head, B chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.00 E-value=46 Score=19.40 Aligned_cols=30 Identities=7% Similarity=0.277 Sum_probs=18.2
Q ss_pred CcCCCCEEEEEEEEecC---CceeeceEEEEEE
Q psy3777 21 DFVTGDTIIVNLNVIEG---TRKRIQAYEGIVI 50 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg---~k~r~q~f~GvvI 50 (99)
++.+||.|.|.+.-..+ .-..-..|.|..|
T Consensus 97 ~L~agD~V~v~~~~~~~~~~~~~~~s~F~G~Li 129 (132)
T d1pk6b_ 97 KLEQGENVFLQATDKNSLLGMEGANSIFSGFLL 129 (132)
T ss_dssp EECTTCEEEEEEEEEECCBCBTTBCEEEEEEEE
T ss_pred EecCCCEEEEEEeCCCcEecCCCCcEEEEEEEE
Confidence 57899999888754211 1122346777765
No 78
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]}
Probab=23.87 E-value=30 Score=20.44 Aligned_cols=20 Identities=15% Similarity=0.546 Sum_probs=16.1
Q ss_pred cCeeEEEEEeecCCccceEEEE
Q psy3777 68 YNEGIERTFQLYSPIISSIIVK 89 (99)
Q Consensus 68 ~gvGVEr~fpl~SP~I~~I~V~ 89 (99)
.+.|++ |-|+||.-++|+++
T Consensus 15 ~~~g~~--F~lwAP~A~~V~L~ 34 (115)
T d2fhfa1 15 TDSGVT--FRVWAPTAQQVELV 34 (115)
T ss_dssp ETTEEE--EEEECTTCSEEEEE
T ss_pred eCCcEE--EEEECCCCCEEEEE
Confidence 456665 88999999999985
No 79
>d3d3ra1 b.40.14.1 (A:1-76) Hydrogenase expression/formation protein HypC {Shewanella oneidensis [TaxId: 70863]}
Probab=23.71 E-value=23 Score=20.35 Aligned_cols=14 Identities=14% Similarity=0.695 Sum_probs=11.7
Q ss_pred CCC-cCCCCEEEEEE
Q psy3777 19 IPD-FVTGDTIIVNL 32 (99)
Q Consensus 19 ~p~-f~~GD~v~V~~ 32 (99)
+|+ .+|||.|-||.
T Consensus 35 v~e~v~vGDyVLVH~ 49 (76)
T d3d3ra1 35 MTEPLAIGDYVLIHI 49 (76)
T ss_dssp BSSCCCTTCEEEEEE
T ss_pred ccCCCCCCCEEEEec
Confidence 465 89999999986
No 80
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.69 E-value=24 Score=18.83 Aligned_cols=14 Identities=43% Similarity=0.669 Sum_probs=11.3
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
.|+.||+|.|.-..
T Consensus 23 sf~~Gd~i~vl~~~ 36 (62)
T d1k4us_ 23 EFQEGDIILVLSKV 36 (62)
T ss_dssp CBCSSCEEEEEEES
T ss_pred CCCCCCEEEEeEEc
Confidence 79999999986543
No 81
>d1iq8a3 b.122.1.1 (A:506-582) Archaeosine tRNA-guanine transglycosylase, C3 domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.65 E-value=19 Score=20.06 Aligned_cols=12 Identities=25% Similarity=0.404 Sum_probs=10.4
Q ss_pred CCcCCCCEEEEE
Q psy3777 20 PDFVTGDTIIVN 31 (99)
Q Consensus 20 p~f~~GD~v~V~ 31 (99)
++|++||.|.|.
T Consensus 31 ~~~~~Gd~V~I~ 42 (77)
T d1iq8a3 31 PGIRPYDEVLVV 42 (77)
T ss_dssp TTCCTTCEEEEE
T ss_pred CCCCCCCEEEEE
Confidence 579999999885
No 82
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.56 E-value=19 Score=18.99 Aligned_cols=14 Identities=29% Similarity=0.313 Sum_probs=11.3
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
.|+.||+|.|.-..
T Consensus 20 s~~~Gd~i~vl~~~ 33 (58)
T d1ng2a1 20 ALSTGDVVEVVEKS 33 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 69999999986543
No 83
>d1sroa_ b.40.4.5 (A:) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Escherichia coli [TaxId: 562]}
Probab=23.19 E-value=29 Score=19.06 Aligned_cols=15 Identities=13% Similarity=0.328 Sum_probs=12.4
Q ss_pred cCCCCEEEEEEEEec
Q psy3777 22 FVTGDTIIVNLNVIE 36 (99)
Q Consensus 22 f~~GD~v~V~~~i~e 36 (99)
|++||.|++.+.-.+
T Consensus 50 ~~~G~~v~v~Vi~id 64 (76)
T d1sroa_ 50 LQMGQEVPVKVLEVD 64 (76)
T ss_dssp CCTTCEEEEEEEECC
T ss_pred cCCCCEEEEEEEEEC
Confidence 899999999887543
No 84
>d2z0sa1 b.40.4.5 (A:60-147) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=23.09 E-value=40 Score=18.76 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=13.6
Q ss_pred CCcCCCCEEEEEEEEec
Q psy3777 20 PDFVTGDTIIVNLNVIE 36 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~e 36 (99)
+.|++||.|.+.+.-..
T Consensus 54 ~~~~vGd~V~~kV~~vd 70 (88)
T d2z0sa1 54 SLLKVGDYIKAKVVAFD 70 (88)
T ss_dssp TSSCTTCEEEEEEEEEC
T ss_pred hhcccCcEEEEEEEEEC
Confidence 34999999999987543
No 85
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.87 E-value=21 Score=18.65 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=11.4
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
.|+.||.|.|.-..
T Consensus 18 s~~~Gd~v~v~~~~ 31 (55)
T d1u06a1 18 TMKKGDILTLLNST 31 (55)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEeEEc
Confidence 59999999997543
No 86
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.70 E-value=20 Score=18.90 Aligned_cols=12 Identities=25% Similarity=0.423 Sum_probs=10.5
Q ss_pred CcCCCCEEEEEE
Q psy3777 21 DFVTGDTIIVNL 32 (99)
Q Consensus 21 ~f~~GD~v~V~~ 32 (99)
.|+.||+|.|.-
T Consensus 19 s~~~Gd~i~v~~ 30 (57)
T d1ckaa_ 19 PFKKGDILRIRD 30 (57)
T ss_dssp CBCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 799999999964
No 87
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}
Probab=22.57 E-value=21 Score=18.54 Aligned_cols=11 Identities=0% Similarity=-0.019 Sum_probs=9.9
Q ss_pred CcCCCCEEEEE
Q psy3777 21 DFVTGDTIIVN 31 (99)
Q Consensus 21 ~f~~GD~v~V~ 31 (99)
.|+.||++.|.
T Consensus 16 s~~~Gd~~~vl 26 (53)
T d2rn8a1 16 ALRCDEEYYLL 26 (53)
T ss_dssp CCCTTCEEEEC
T ss_pred eECCCCEEEEe
Confidence 69999999995
No 88
>d2ot2a1 b.40.14.1 (A:1-90) Hydrogenase expression/formation protein HypC {Escherichia coli [TaxId: 562]}
Probab=22.22 E-value=23 Score=21.03 Aligned_cols=13 Identities=15% Similarity=0.253 Sum_probs=11.3
Q ss_pred CCcCCCCEEEEEE
Q psy3777 20 PDFVTGDTIIVNL 32 (99)
Q Consensus 20 p~f~~GD~v~V~~ 32 (99)
|+.++||.|-||.
T Consensus 40 ~e~~vGDyVLVH~ 52 (90)
T d2ot2a1 40 GQPRVGQWVLVHV 52 (90)
T ss_dssp SCBCTTCEEEEET
T ss_pred cccCCCCEEEEeh
Confidence 6789999999985
No 89
>d2owna2 d.38.1.8 (A:150-258) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}
Probab=21.45 E-value=65 Score=18.03 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=14.3
Q ss_pred CCcCCCCEEEEEEEEecC
Q psy3777 20 PDFVTGDTIIVNLNVIEG 37 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg 37 (99)
-+.+.||.|.|+..+.+.
T Consensus 61 ~~~~~gd~v~v~t~v~~~ 78 (109)
T d2owna2 61 NEVKYGQTVTAHANILPS 78 (109)
T ss_dssp SCCCTTCEEEEEEEEECC
T ss_pred CccCCCCeEEEEEEEEEc
Confidence 357889999999988543
No 90
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.38 E-value=22 Score=20.33 Aligned_cols=14 Identities=29% Similarity=0.197 Sum_probs=11.7
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
.|+.||+|.|.-..
T Consensus 24 sf~kGdil~V~~~~ 37 (96)
T d1kjwa1 24 SFRFGDVLHVIDAG 37 (96)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEcCCCEEEEeeec
Confidence 69999999997654
No 91
>d2apoa1 b.122.1.1 (A:247-331) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=21.34 E-value=22 Score=20.22 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=17.3
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
++|++||.|.|. .+. ..+-|+.++.-
T Consensus 31 ~~~~~Gd~V~V~---~~~-----g~~iavG~~~~ 56 (85)
T d2apoa1 31 KGIGKGETVLVE---TLK-----GEAVAVGKALM 56 (85)
T ss_dssp TTCCTTCEEEEE---CTT-----SCEEEEEEESS
T ss_pred CCCcCCCEEEEE---eCC-----CCEEEEEEEee
Confidence 579999999884 222 23557776654
No 92
>d2q07a1 b.122.1.1 (A:460-527) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.14 E-value=23 Score=19.73 Aligned_cols=11 Identities=9% Similarity=0.320 Sum_probs=9.8
Q ss_pred CCcCCCCEEEE
Q psy3777 20 PDFVTGDTIIV 30 (99)
Q Consensus 20 p~f~~GD~v~V 30 (99)
|++++||.|-|
T Consensus 24 ~~I~~GD~V~V 34 (68)
T d2q07a1 24 EKIRPNDVVVF 34 (68)
T ss_dssp TTCCTTCEEEE
T ss_pred CCCCCCCEEEE
Confidence 78999999877
No 93
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.10 E-value=21 Score=21.16 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=11.0
Q ss_pred CcCCCCEEEEEEE
Q psy3777 21 DFVTGDTIIVNLN 33 (99)
Q Consensus 21 ~f~~GD~v~V~~~ 33 (99)
.|+.||+|.|.-.
T Consensus 32 s~~~Gd~i~Vl~~ 44 (118)
T d1ng2a2 32 SLLEGEAVEVIHK 44 (118)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEeEe
Confidence 7999999999644
No 94
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=20.97 E-value=20 Score=20.93 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=11.3
Q ss_pred CcCCCCEEEEEEE
Q psy3777 21 DFVTGDTIIVNLN 33 (99)
Q Consensus 21 ~f~~GD~v~V~~~ 33 (99)
.|++||+|...+.
T Consensus 18 ~F~vGD~LvF~y~ 30 (91)
T d1f56a_ 18 SFRAGDVLVFKYI 30 (91)
T ss_dssp CBCTTCEEEEECC
T ss_pred CCcCCCEEEEEEc
Confidence 6999999998774
No 95
>d1guta_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Clostridium pasteurianum, MOP II [TaxId: 1501]}
Probab=20.92 E-value=60 Score=17.31 Aligned_cols=22 Identities=9% Similarity=0.300 Sum_probs=18.3
Q ss_pred ceEEEEEEEEecCCCcceEEEE
Q psy3777 43 QAYEGIVISRRNKGLNSNFIVR 64 (99)
Q Consensus 43 q~f~GvvIa~r~~g~~stftlR 64 (99)
+.|.|.|.++...+..+.+++.
T Consensus 6 N~l~g~V~~I~~~~~~~~V~l~ 27 (67)
T d1guta_ 6 NQLKGKVVGLKKGVVTAEVVLE 27 (67)
T ss_dssp CEEEEEEEEEEECSSEEEEEEE
T ss_pred hEEEEEEEEEEECCCcEEEEEE
Confidence 4799999999988887777774
No 96
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]}
Probab=20.88 E-value=21 Score=24.19 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=13.5
Q ss_pred cCCCCC--cCCCCEEEEE
Q psy3777 16 KKNIPD--FVTGDTIIVN 31 (99)
Q Consensus 16 ~~~~p~--f~~GD~v~V~ 31 (99)
+-|+|. ++|||+|.|.
T Consensus 127 ~VnIPSy~vk~GDvIsvk 144 (204)
T d2gy9d1 127 VVNIASYQVSPNDVVSIR 144 (204)
T ss_dssp BCCCTTCBCCTTCBEEEC
T ss_pred EEEeccEeecCCCEEEec
Confidence 468897 7899999986
No 97
>d1aoha_ b.2.2.2 (A:) Cohesin domain {Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]}
Probab=20.81 E-value=46 Score=20.18 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=18.0
Q ss_pred CcCCCCEEEEEEEEecCCceeeceEE
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRIQAYE 46 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~q~f~ 46 (99)
.-++||+|.|-+++..-....++.++
T Consensus 10 ~~~~G~tv~V~V~~~~v~~~~v~~~~ 35 (143)
T d1aoha_ 10 NAKPGDTVRIPVRFSGIPSKGIANCD 35 (143)
T ss_dssp EECTTCEEEEEEEEESCCTTCBSEEE
T ss_pred EecCCCEEEEEEEEeccCCCceEEEE
Confidence 35799999999998642234456554
No 98
>d2b3na1 d.38.1.4 (A:6-159) Hypothetical protein AF1124 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.79 E-value=30 Score=21.36 Aligned_cols=16 Identities=25% Similarity=0.154 Sum_probs=13.0
Q ss_pred CcCCCCEEEEEEEEec
Q psy3777 21 DFVTGDTIIVNLNVIE 36 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~e 36 (99)
++.+||+|.++..+.+
T Consensus 110 PV~~GDtl~~~~~V~~ 125 (154)
T d2b3na1 110 PVRIGDVVRVEGVVSG 125 (154)
T ss_dssp CCCTTCEEEEEEEEEE
T ss_pred CcCCCCEEEEEEEEEE
Confidence 5789999999888764
No 99
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.42 E-value=22 Score=20.01 Aligned_cols=12 Identities=42% Similarity=0.623 Sum_probs=10.4
Q ss_pred CcCCCCEEEEEE
Q psy3777 21 DFVTGDTIIVNL 32 (99)
Q Consensus 21 ~f~~GD~v~V~~ 32 (99)
.|+.||+|.|.-
T Consensus 23 s~~~Gd~v~Vl~ 34 (93)
T d1uffa_ 23 SFNSGDIIQVDE 34 (93)
T ss_dssp CBCTTCEEEECS
T ss_pred cCcCCCEEEEEE
Confidence 699999999963
No 100
>d2nn6g1 b.40.4.5 (G:107-194) S1-domain of exosome component 3 (RRP40) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.26 E-value=40 Score=19.36 Aligned_cols=20 Identities=35% Similarity=0.481 Sum_probs=16.3
Q ss_pred cCCCCCcCCCCEEEEEEEEe
Q psy3777 16 KKNIPDFVTGDTIIVNLNVI 35 (99)
Q Consensus 16 ~~~~p~f~~GD~v~V~~~i~ 35 (99)
++.-|.|++||.|-..+.-.
T Consensus 44 k~~r~~l~~GD~V~arV~~v 63 (88)
T d2nn6g1 44 KRNRPNVQVGDLIYGQFVVA 63 (88)
T ss_dssp SCSSSSSCTTCEEEEEEEEC
T ss_pred cccCcccCCCCEEEEEEEEe
Confidence 45678999999999988644
No 101
>d1q7ha1 b.122.1.1 (A:69-153) Hypothetical protein Ta1423, C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.26 E-value=25 Score=19.91 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=17.1
Q ss_pred CCcCCCCEEEEEEEEecCCceeeceEEEEEEEEe
Q psy3777 20 PDFVTGDTIIVNLNVIEGTRKRIQAYEGIVISRR 53 (99)
Q Consensus 20 p~f~~GD~v~V~~~i~eg~k~r~q~f~GvvIa~r 53 (99)
++|++||.|.|.. .+| .+-|+.++.-
T Consensus 31 ~~~~~gd~V~I~~--~~g------~~iavG~a~~ 56 (85)
T d1q7ha1 31 DSIRKGDMIFVKS--SKG------YFIAVGMAEM 56 (85)
T ss_dssp TTCCTTCEEEEEE--TTS------CEEEEEEESS
T ss_pred CCCCCCCEEEEEe--CCC------CEEEEEEEEe
Confidence 5799999998852 222 2557666643
No 102
>d2c35b1 b.40.4.5 (B:78-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.18 E-value=31 Score=19.62 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=15.6
Q ss_pred CcCCCCEEEEEEEEecCCceee
Q psy3777 21 DFVTGDTIIVNLNVIEGTRKRI 42 (99)
Q Consensus 21 ~f~~GD~v~V~~~i~eg~k~r~ 42 (99)
.|+.||.|+|.+.-..-+..++
T Consensus 59 ~~~~Gd~VrvkV~~v~~~~~~I 80 (94)
T d2c35b1 59 VIQQDDEIRLKIVGTRVDKNDI 80 (94)
T ss_dssp EEETTCEEEEEEEEEEEETTEE
T ss_pred EEeCCCEEEEEEEEEecCcCcc
Confidence 5899999999987543334444
No 103
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.15 E-value=27 Score=18.34 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=11.4
Q ss_pred CcCCCCEEEEEEEE
Q psy3777 21 DFVTGDTIIVNLNV 34 (99)
Q Consensus 21 ~f~~GD~v~V~~~i 34 (99)
.|+.||+|.|.-..
T Consensus 19 s~~~Gd~v~vl~~~ 32 (58)
T d1oota_ 19 PFRKGDVITILKKS 32 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEEEee
Confidence 69999999996543
No 104
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.09 E-value=26 Score=20.07 Aligned_cols=12 Identities=42% Similarity=0.595 Sum_probs=10.6
Q ss_pred CcCCCCEEEEEE
Q psy3777 21 DFVTGDTIIVNL 32 (99)
Q Consensus 21 ~f~~GD~v~V~~ 32 (99)
.|+.||+|.|.-
T Consensus 21 s~~~Gd~i~V~~ 32 (83)
T d1phta_ 21 DLHLGDILTVNK 32 (83)
T ss_dssp CBCTTCEEEEEH
T ss_pred cccCCCEEEEEe
Confidence 699999999974
Done!