BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3778
(1751 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 163/401 (40%), Gaps = 78/401 (19%)
Query: 727 GHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 786
G DN F + R E+ LP LN RR + L +DPS SA L A +L
Sbjct: 10 GVDNKFNKERRRARREIRHLPNLNRE----QRRAFIRSLRDDPSQ--SANLLAEAKKLND 63
Query: 787 WAPK---HWLYGATPSHNEIMQWLLTLT-------TKVLCTGVSYGGHVRRTF---VEYQ 833
PK + + + +E+ W V+ GVS VRR ++
Sbjct: 64 AQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVS--SVVRRCVHRATGHE 121
Query: 834 LISTFLKRAEFRLITNALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSL 893
++ RL L+ ++ + + + HP+++ + + S SS
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL-------IDSYESSSF 174
Query: 894 IYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGV 953
++ +F LM+K +L +YL E+ A LS E + LLE V
Sbjct: 175 MF------------------LVFDLMRK--GELFDYLTEKVA-LSEKETRSIMRSLLEAV 213
Query: 954 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 1013
+ L+ + HRDLK +NILLD DN Q+ ++DFG S + G ++ EL G
Sbjct: 214 SFLHANNIVHRDLKPENILLD---DNM--QIRLSDFGFSCHLEPGEKLR------ELCGT 262
Query: 1014 VALMAPEVALAT-----PGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
+APE+ + PG Y K D W G + + + PF+ + +
Sbjct: 263 PGYLAPEILKCSMDETHPG------YGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316
Query: 1068 NALPQLNTNVPE------VMRRLVAKLLENDPSDRPSAELA 1102
Q + PE ++ L+++LL+ DP R +AE A
Sbjct: 317 IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 35/163 (21%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F LM+K +L +YL E+ A LS E + LLE V+ L+ + HRDLK +NILLD
Sbjct: 178 VFDLMRK--GELFDYLTEKVA-LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1550
DN Q+ ++DFG S + G ++ EL G +APE+ + PG
Sbjct: 235 ---DNM--QIRLSDFGFSCHLEPGEKLR------ELCGTPGYLAPEILKCSMDETHPG-- 281
Query: 1551 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
Y K D W G + + + PF WHR+ +
Sbjct: 282 ----YGKEVDLWACGVILFTLLAGSPPF---------WHRRQI 311
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 32/191 (16%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L+ Q+L V +L+ + HRDLK +N+L E+N+ +++ITDFG S ++G+
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS--KIMITDFGLSKMEQNGI---M 164
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1062
S+A G +APEV P YSK+ D W+ G + Y + PFY+ +
Sbjct: 165 STA----CGTPGYVAPEVLAQKP-------YSKAVDCWSIGVITYILLCGYPPFYEETES 213
Query: 1063 TDYE--VNALPQLNT----NVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHW 1116
+E + + ++ E + + LLE DP++R + E A L P W
Sbjct: 214 KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKA-------LSHP--W 264
Query: 1117 LYGATPSHNEI 1127
+ G T H +I
Sbjct: 265 IDGNTALHRDI 275
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 62/227 (27%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L+ Q+L V +L+ + HRDLK +N+L E+N+ +++ITDFG S ++G+
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS--KIMITDFGLSKMEQNGI---M 164
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
S+A G +APEV P YSK+ D W+ G + Y + PFY+ +
Sbjct: 165 STA----CGTPGYVAPEVLAQKP-------YSKAVDCWSIGVITYILLCGYPPFYEETES 213
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
L++ + + YE ++PF+ ++ E
Sbjct: 214 K-------LFEKIKEGY---------YEF---ESPFWD-----------------DISES 237
Query: 1644 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEI 1690
+ + LLE DP++R + E A L P W+ G T H +I
Sbjct: 238 AKDFICHLLEKDPNERYTCEKA-------LSHP--WIDGNTALHRDI 275
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 211 PKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 270
P++N+ +++ITDFG S ++G+ S+A G +APEV P YS
Sbjct: 142 PEENS--KIMITDFGLSKMEQNGI---MSTA----CGTPGYVAPEVLAQKP-------YS 185
Query: 271 KS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNT----NVPEVMRRLVAKL 323
K+ D W+ G + Y + PFY+ + +E + + ++ E + + L
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 324 LENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEI 362
LE DP++R + E A L P W+ G T H +I
Sbjct: 246 LEKDPNERYTCEKA-------LSHP--WIDGNTALHRDI 275
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 652 PKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 711
P++N+ +++ITDFG S ++G+ S+A G +APEV P YS
Sbjct: 142 PEENS--KIMITDFGLSKMEQNGI---MSTA----CGTPGYVAPEVLAQKP-------YS 185
Query: 712 KS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNT----NVPEVMRRLVAKL 764
K+ D W+ G + Y + PFY+ + +E + + ++ E + + L
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 765 LENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEI 803
LE DP++R + E A L P W+ G T H +I
Sbjct: 246 LEKDPNERYTCEKA-------LSHP--WIDGNTALHRDI 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.0 bits (162), Expect = 9e-11, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTCF 174
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1056 FY--------QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
FY + Y + LPQ T + + + L+ K+L PS R + AT C
Sbjct: 222 FYGKNEYDILKRVETGKYAFD-LPQWRT-ISDDAKDLIRKMLTFHPSLR----ITATQCL 275
Query: 1108 LYLWAPKH 1115
+ W K+
Sbjct: 276 EHPWIQKY 283
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTCF 174
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1577 FY 1578
FY
Sbjct: 222 FY 223
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDC-DIKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 315
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 316 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 350
+ L+ K+L PS R + AT C + W K+
Sbjct: 253 AKDLIRKMLTFHPSLR----ITATQCLEHPWIQKY 283
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDC-DIKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 756
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 757 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 791
+ L+ K+L PS R + AT C + W K+
Sbjct: 253 AKDLIRKMLTFHPSLR----ITATQCLEHPWIQKY 283
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.0 bits (162), Expect = 9e-11, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTCF 174
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1056 FY--------QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
FY + Y + LPQ T + + + L+ K+L PS R + AT C
Sbjct: 222 FYGKNEYDILKRVETGKYAFD-LPQWRT-ISDDAKDLIRKMLTFHPSLR----ITATQCL 275
Query: 1108 LYLWAPKH 1115
+ W K+
Sbjct: 276 EHPWIQKY 283
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC--DIKIIDFGLSTCF 174
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1577 FY 1578
FY
Sbjct: 222 FY 223
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDC-DIKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 315
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 316 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 350
+ L+ K+L PS R + AT C + W K+
Sbjct: 253 AKDLIRKMLTFHPSLR----ITATQCLEHPWIQKY 283
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDC-DIKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 756
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 757 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 791
+ L+ K+L PS R + AT C + W K+
Sbjct: 253 AKDLIRKMLTFHPSLR----ITATQCLEHPWIQKY 283
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 160
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1041
I DFG + T KS S + +L G++ MAPEV + +SF +SD +
Sbjct: 161 ---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF----QSDVYA 210
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVAKLLEND 1092
G V YE+ P Y + N D + L ++ +N P+ M+RL+A+ L+
Sbjct: 211 FGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKK 269
Query: 1093 PSDRPS 1098
+RPS
Sbjct: 270 RDERPS 275
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 160
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1562
I DFG + T KS S + +L G++ MAPEV + +SF +SD +
Sbjct: 161 ---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF----QSDVYA 210
Query: 1563 AGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQS 1622
G V YE+ P Y + N D + S +P
Sbjct: 211 FGIVLYELMTGQLP-YSNINNRDQIIE-------MVGRGSLSPD---------------- 246
Query: 1623 ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L ++ +N P+ M+RL+A+ L+ +RPS
Sbjct: 247 ----------LSKVRSNCPKRMKRLMAECLKKKRDERPS 275
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 212 KDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYS 270
+DNT I DFG + T KS S + +L G++ MAPEV + +SF
Sbjct: 155 EDNTVK---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF---- 204
Query: 271 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVA 321
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+A
Sbjct: 205 QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 322 KLLENDPSDRPS 333
+ L+ +RPS
Sbjct: 264 ECLKKKRDERPS 275
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 653 KDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYS 711
+DNT I DFG + T KS S + +L G++ MAPEV + +SF
Sbjct: 155 EDNTVK---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF---- 204
Query: 712 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVA 762
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+A
Sbjct: 205 QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 763 KLLENDPSDRPS 774
+ L+ +RPS
Sbjct: 264 ECLKKKRDERPS 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 160
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1041
I DFG + T KS S + +L G++ MAPEV + +SF +SD +
Sbjct: 161 ---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF----QSDVYA 210
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVAKLLEND 1092
G V YE+ P Y + N D + L ++ +N P+ M+RL+A+ L+
Sbjct: 211 FGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKK 269
Query: 1093 PSDRPS 1098
+RPS
Sbjct: 270 RDERPS 275
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 160
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1562
I DFG + T KS S + +L G++ MAPEV + +SF +SD +
Sbjct: 161 ---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF----QSDVYA 210
Query: 1563 AGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQS 1622
G V YE+ P Y + N D + S +P
Sbjct: 211 FGIVLYELMTGQLP-YSNINNRDQIIE-------MVGRGSLSPD---------------- 246
Query: 1623 ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L ++ +N P+ M+RL+A+ L+ +RPS
Sbjct: 247 ----------LSKVRSNCPKRMKRLMAECLKKKRDERPS 275
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 212 KDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYS 270
+DNT I DFG + T KS S + +L G++ MAPEV + +SF
Sbjct: 155 EDNTVK---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF---- 204
Query: 271 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVA 321
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+A
Sbjct: 205 QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 322 KLLENDPSDRPS 333
+ L+ +RPS
Sbjct: 264 ECLKKKRDERPS 275
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 653 KDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYS 711
+DNT I DFG + T KS S + +L G++ MAPEV + +SF
Sbjct: 155 EDNTVK---IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDSNPYSF---- 204
Query: 712 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVA 762
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+A
Sbjct: 205 QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 763 KLLENDPSDRPS 774
+ L+ +RPS
Sbjct: 264 ECLKKKRDERPS 275
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 29/188 (15%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + C + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD-CD-IKIIDFGLSTCF 174
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1056 FY--------QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
FY + Y + LPQ T + + + L+ K+L + PS + AT C
Sbjct: 222 FYGKNEYDILKRVETGKYAFD-LPQWRT-ISDDAKDLIRKML----TFHPSLRITATQCL 275
Query: 1108 LYLWAPKH 1115
+ W K+
Sbjct: 276 EHPWIQKY 283
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ S H+ + Q+ G+T+++ H HRDLK +NILL+ E + C + I DFG S
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKD-CD-IKIIDFGLSTCF 174
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ M+ + G +APEV T K D W+AG + Y + P
Sbjct: 175 QQNTKMK------DRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLSGTPP 221
Query: 1577 FY 1578
FY
Sbjct: 222 FY 223
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDCD-IKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 315
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 316 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 350
+ L+ K+L + PS + AT C + W K+
Sbjct: 253 AKDLIRKML----TFHPSLRITATQCLEHPWIQKY 283
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ K+ C + I DFG S + M+ + G +APEV T
Sbjct: 149 PENILLESKEKDCD-IKIIDFGLSTCFQQNTKMK------DRIGTAYYIAPEVLRGTYD- 200
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPEV 756
K D W+AG + Y + PFY + Y + LPQ T + +
Sbjct: 201 ------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD-LPQWRT-ISDD 252
Query: 757 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 791
+ L+ K+L + PS + AT C + W K+
Sbjct: 253 AKDLIRKML----TFHPSLRITATQCLEHPWIQKY 283
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 25/187 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 91 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 148
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAW 1040
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD +
Sbjct: 149 ---IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSF----QSDVY 197
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLVAKLLEN 1091
G V YE+ P Y + N D + L ++ +N P+ M+RL+A+ L+
Sbjct: 198 AFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 256
Query: 1092 DPSDRPS 1098
+RPS
Sbjct: 257 KRDERPS 263
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 49/220 (22%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+ L ++L + M + I + Q G+ +L+ HRDLKS+NI L EDNT
Sbjct: 91 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTVK 148
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAW 1561
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD +
Sbjct: 149 ---IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSF----QSDVY 197
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQ 1621
G V YE+ P Y + N D + S +P
Sbjct: 198 AFGIVLYELMTGQLP-YSNINNRDQIIE-------MVGRGSLSPD--------------- 234
Query: 1622 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L ++ +N P+ M+RL+A+ L+ +RPS
Sbjct: 235 -----------LSKVRSNCPKRMKRLMAECLKKKRDERPS 263
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 212 KDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNY 269
+DNT I DFG ++ ++ S Q+ +L G++ MAPEV + +SF
Sbjct: 143 EDNTVK---IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSF--- 192
Query: 270 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLV 320
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+
Sbjct: 193 -QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
Query: 321 AKLLENDPSDRPS 333
A+ L+ +RPS
Sbjct: 251 AECLKKKRDERPS 263
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 653 KDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNY 710
+DNT I DFG ++ ++ S Q+ +L G++ MAPEV + +SF
Sbjct: 143 EDNTVK---IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSF--- 192
Query: 711 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA---------LPQLNTNVPEVMRRLV 761
+SD + G V YE+ P Y + N D + L ++ +N P+ M+RL+
Sbjct: 193 -QSDVYAFGIVLYELMTGQLP-YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
Query: 762 AKLLENDPSDRPS 774
A+ L+ +RPS
Sbjct: 251 AECLKKKRDERPS 263
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 934 CAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 993
+ S E F QL+ GV++ + + AHRDLK +N LLD S P+L I DFG Y
Sbjct: 109 AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGS---PAPRLKIADFG--Y 163
Query: 994 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
+ S L Q SA G A +APEV L + +D W+ G Y +
Sbjct: 164 SKASVLHSQPKSA----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGA 214
Query: 1054 NPFY--QSARNTDYEVNALPQLNTNVPEVM------RRLVAKLLENDPSDRPS 1098
PF + +N ++ + + +P+ + R L++++ DP+ R S
Sbjct: 215 YPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 1455 CAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 1514
+ S E F QL+ GV++ + + AHRDLK +N LLD S P+L I DFG Y
Sbjct: 109 AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGS---PAPRLKIADFG--Y 163
Query: 1515 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
+ S L Q SA G A +APEV L + +D W+ G Y +
Sbjct: 164 SKASVLHSQPKSA----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGA 214
Query: 1575 NPF 1577
PF
Sbjct: 215 YPF 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 911 RNMSLFILMKKYNTDLRNY---LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
N S IL+ +Y + L E +S ++ I L Q+LEGV +L+ + H DLK
Sbjct: 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
NILL S + I DFG S K G + + E+ G +APE+ P
Sbjct: 159 PQNILL--SSIYPLGDIKIVDFGMS--RKIGHACELR----EIMGTPEYLAPEILNYDPI 210
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVM 1081
+ +D W G +AY + H +PF Y V+ + ++V ++
Sbjct: 211 T------TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA 264
Query: 1082 RRLVAKLLENDPSDRPSAELAATVCQLYLW 1111
+ LL +P RP+AE+ + L W
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 93/249 (37%), Gaps = 59/249 (23%)
Query: 1432 RNMSLFILMKKYNTDLRNY---LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
N S IL+ +Y + L E +S ++ I L Q+LEGV +L+ + H DLK
Sbjct: 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
NILL S + I DFG S K G + + E+ G +APE+ P
Sbjct: 159 PQNILL--SSIYPLGDIKIVDFGMS--RKIGHACELR----EIMGTPEYLAPEILNYDPI 210
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTV 1608
+ +D W G +AY + H +PF
Sbjct: 211 T------TATDMWNIGIIAYMLLTHTSPF------------------------------- 233
Query: 1609 AYEIFGHDNP---FYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1665
G DN S N DY ++V ++ + LL +P RP+AE+
Sbjct: 234 ----VGEDNQETYLNISQVNVDYSEETF----SSVSQLATDFIQSLLVKNPEKRPTAEIC 285
Query: 1666 ATVCQLYLW 1674
+ L W
Sbjct: 286 LSHSWLQQW 294
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 22/146 (15%)
Query: 207 SLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 266
S IYP + + I DFG S K G + + E+ G +APE+ P
Sbjct: 165 SSIYPLGD----IKIVDFGMS--RKIGHACELR----EIMGTPEYLAPEILNYDPIT--- 211
Query: 267 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLV 320
+ +D W G +AY + H +PF Y V+ + ++V ++ +
Sbjct: 212 ---TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268
Query: 321 AKLLENDPSDRPSAELAATVCQLYLW 346
LL +P RP+AE+ + L W
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWLQQW 294
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 22/146 (15%)
Query: 648 SLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 707
S IYP + + I DFG S K G + + E+ G +APE+ P
Sbjct: 165 SSIYPLGD----IKIVDFGMS--RKIGHACELR----EIMGTPEYLAPEILNYDPIT--- 211
Query: 708 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLV 761
+ +D W G +AY + H +PF Y V+ + ++V ++ +
Sbjct: 212 ---TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268
Query: 762 AKLLENDPSDRPSAELAATVCQLYLW 787
LL +P RP+AE+ + L W
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWLQQW 294
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 153
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 154 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 207
Query: 1055 PFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 208 P-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 47/205 (22%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 153
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 154 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 207
Query: 1576 PFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQ 1635
P+ I D + R Y L +
Sbjct: 208 PY--------------------------------SNINNRDQIIFMVGRG--YLSPDLSK 233
Query: 1636 LNTNVPEVMRRLVAKLLENDPSDRP 1660
+ +N P+ M+RL+A+ L+ +RP
Sbjct: 234 VRSNCPKAMKRLMAECLKKKRDERP 258
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGT 279
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 197
Query: 280 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 330
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 198 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 331 RP 332
RP
Sbjct: 257 RP 258
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGT 720
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 197
Query: 721 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 771
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 198 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 772 RP 773
RP
Sbjct: 257 RP 258
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 120 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 173
Query: 996 KSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 174 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 227
Query: 1055 PFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 228 P-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 47/205 (22%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 120 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 173
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 174 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 227
Query: 1576 PFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQ 1635
P+ I D + R Y L +
Sbjct: 228 PY--------------------------------SNINNRDQIIFMVGRG--YLSPDLSK 253
Query: 1636 LNTNVPEVMRRLVAKLLENDPSDRP 1660
+ +N P+ M+RL+A+ L+ +RP
Sbjct: 254 VRSNCPKAMKRLMAECLKKKRDERP 278
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGT 279
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 165 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 217
Query: 280 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 330
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 218 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 276
Query: 331 RP 332
RP
Sbjct: 277 RP 278
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGT 720
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 165 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 217
Query: 721 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 771
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 218 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 276
Query: 772 RP 773
RP
Sbjct: 277 RP 278
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+ S E F QLL GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 111 GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS---PAPRLKICDFG--YS 165
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 166 KSSVLHSQPKST----VGTPAYIAPEVLLRQE-----YDGKIADVWSCGVTLYVMLVGAY 216
Query: 1055 PFYQSARNTDYE--VNALPQLNTNVPEVMR------RLVAKLLENDPSDRPS 1098
PF DY + + + ++P+ +R L++++ DP+ R S
Sbjct: 217 PFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS 268
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+ S E F QLL GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 111 GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS---PAPRLKICDFG--YS 165
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 166 KSSVLHSQPKST----VGTPAYIAPEVLLRQE-----YDGKIADVWSCGVTLYVMLVGAY 216
Query: 1576 PFYQSARNTDYWHRKWLWQHLVYSHS 1601
PF DY RK + + L +S
Sbjct: 217 PFEDPEEPRDY--RKTIQRILSVKYS 240
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 102 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 156
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 157 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 208
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 209 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 102 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 156
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 157 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 208
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 209 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 234
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 235 KVRSNCPKAMKRLMAECLKKKRDERP 260
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 147 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 198
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 199 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 257
Query: 330 DRP 332
+RP
Sbjct: 258 ERP 260
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 147 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 198
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 199 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 257
Query: 771 DRP 773
+RP
Sbjct: 258 ERP 260
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 181
Query: 996 KSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 182 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 235
Query: 1055 PFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 236 P-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 47/205 (22%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG + T
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLA-TE 181
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
KS S + +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 182 KSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQL 235
Query: 1576 PFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQ 1635
P+ I D + R Y L +
Sbjct: 236 PY--------------------------------SNINNRDQIIFMVGRG--YLSPDLSK 261
Query: 1636 LNTNVPEVMRRLVAKLLENDPSDRP 1660
+ +N P+ M+RL+A+ L+ +RP
Sbjct: 262 VRSNCPKAMKRLMAECLKKKRDERP 286
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGT 279
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 173 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 225
Query: 280 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 330
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 226 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 331 RP 332
RP
Sbjct: 285 RP 286
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGT 720
I DFG + T KS S + +L G++ MAPEV + +SF +SD + G
Sbjct: 173 IGDFGLA-TEKSRWSGSHQFE--QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGI 225
Query: 721 VAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSD 771
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+ +
Sbjct: 226 VLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 772 RP 773
RP
Sbjct: 285 RP 286
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 154
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 155 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 206
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 207 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 154
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 155 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 206
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 207 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 232
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERP 258
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 196
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 197 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 255
Query: 330 DRP 332
+RP
Sbjct: 256 ERP 258
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 196
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 197 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 255
Query: 771 DRP 773
+RP
Sbjct: 256 ERP 258
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 154
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 155 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 206
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 207 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 154
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 155 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 206
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 207 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 232
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERP 258
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 196
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 197 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 255
Query: 330 DRP 332
+RP
Sbjct: 256 ERP 258
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 145 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 196
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 197 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 255
Query: 771 DRP 773
+RP
Sbjct: 256 ERP 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 159
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 160 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 211
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 212 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 159
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 160 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 211
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 212 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 237
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERP 263
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 150 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 201
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 202 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 260
Query: 330 DRP 332
+RP
Sbjct: 261 ERP 263
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 150 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 201
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 202 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 260
Query: 771 DRP 773
+RP
Sbjct: 261 ERP 263
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 159
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 160 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 211
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 212 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 159
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 160 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 211
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 212 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 237
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERP 263
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 150 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 201
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 202 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 260
Query: 330 DRP 332
+RP
Sbjct: 261 ERP 263
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVA-LATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 150 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 201
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 202 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 260
Query: 771 DRP 773
+RP
Sbjct: 261 ERP 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 127 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 181
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 182 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 233
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 234 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 127 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 181
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 182 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 233
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 234 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 259
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 260 KVRSNCPKAMKRLMAECLKKKRDERP 285
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 172 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 223
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 224 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 282
Query: 330 DRP 332
+RP
Sbjct: 283 ERP 285
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 172 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 223
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 224 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 282
Query: 771 DRP 773
+RP
Sbjct: 283 ERP 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 994
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 182
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1053
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 183 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 234
Query: 1054 NPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
P Y + N D Y L ++ +N P+ M+RL+A+ L+ +RP
Sbjct: 235 LP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 49/206 (23%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYT 1515
+ M + I + Q +G+ +L+ HRDLKS+NI L ED T I DFG ++
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVK---IGDFGLATVK 182
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 1574
++ S Q+ +L G++ MAPEV + +SF +SD + G V YE+
Sbjct: 183 SRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFGIVLYELMTGQ 234
Query: 1575 NPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALP 1634
P+ I D + R Y L
Sbjct: 235 LPY--------------------------------SNINNRDQIIFMVGRG--YLSPDLS 260
Query: 1635 QLNTNVPEVMRRLVAKLLENDPSDRP 1660
++ +N P+ M+RL+A+ L+ +RP
Sbjct: 261 KVRSNCPKAMKRLMAECLKKKRDERP 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 278
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 173 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 224
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 225 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 283
Query: 330 DRP 332
+RP
Sbjct: 284 ERP 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 719
I DFG ++ ++ S Q+ +L G++ MAPEV + +SF +SD + G
Sbjct: 173 IGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSF----QSDVYAFG 224
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ P Y + N D Y L ++ +N P+ M+RL+A+ L+
Sbjct: 225 IVLYELMTGQLP-YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD 283
Query: 771 DRP 773
+RP
Sbjct: 284 ERP 286
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI-LLDCSEDNTCPQ 983
+L ++L E+ L+ E Q+L+GV +L+ R AH DLK +NI LLD + N P+
Sbjct: 94 ELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN--PR 150
Query: 984 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTA 1042
+ + DFG ++ ++G + + G +APE+ P GL ++D W+
Sbjct: 151 IKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSI 197
Query: 1043 GTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLEND 1092
G + Y + +PF SA N D++ + +N E+ + + +LL D
Sbjct: 198 GVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNTSELAKDFIRRLLVKD 253
Query: 1093 PSDR 1096
P R
Sbjct: 254 PKRR 257
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI-LLDCSEDNTCPQ 1504
+L ++L E+ L+ E Q+L+GV +L+ R AH DLK +NI LLD + N P+
Sbjct: 94 ELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN--PR 150
Query: 1505 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTA 1563
+ + DFG ++ ++G + + G +APE+ P GL ++D W+
Sbjct: 151 IKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSI 197
Query: 1564 GTVAYEIFGHDNPF 1577
G + Y + +PF
Sbjct: 198 GVITYILLSGASPF 211
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 189
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 190 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 238
Query: 313 PEVMRRLVAKLLENDPSDR 331
E+ + + +LL DP R
Sbjct: 239 SELAKDFIRRLLVKDPKRR 257
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 189
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 190 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 238
Query: 754 PEVMRRLVAKLLENDPSDR 772
E+ + + +LL DP R
Sbjct: 239 SELAKDFIRRLLVKDPKRR 257
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI-LLDCSEDNTCPQ 983
+L ++L E+ L+ E Q+L+GV +L+ R AH DLK +NI LLD + N P+
Sbjct: 101 ELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN--PR 157
Query: 984 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTA 1042
+ + DFG ++ ++G + + G +APE+ P GL ++D W+
Sbjct: 158 IKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSI 204
Query: 1043 GTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLEND 1092
G + Y + +PF SA N D++ + +N E+ + + +LL D
Sbjct: 205 GVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNTSELAKDFIRRLLVKD 260
Query: 1093 PSDR 1096
P R
Sbjct: 261 PKRR 264
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI-LLDCSEDNTCPQ 1504
+L ++L E+ L+ E Q+L+GV +L+ R AH DLK +NI LLD + N P+
Sbjct: 101 ELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN--PR 157
Query: 1505 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTA 1563
+ + DFG ++ ++G + + G +APE+ P GL ++D W+
Sbjct: 158 IKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSI 204
Query: 1564 GTVAYEIFGHDNPF 1577
G + Y + +PF
Sbjct: 205 GVITYILLSGASPF 218
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 245
Query: 313 PEVMRRLVAKLLENDPSDR 331
E+ + + +LL DP R
Sbjct: 246 SELAKDFIRRLLVKDPKRR 264
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 245
Query: 754 PEVMRRLVAKLLENDPSDR 772
E+ + + +LL DP R
Sbjct: 246 SELAKDFIRRLLVKDPKRR 264
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+ V +L+ HRDLK +N+L ++ + +++I+DFG S G M +
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEES--KIMISDFGLSKMEGKGDVMSTA 182
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNT 1063
G +APEV P YSK+ D W+ G +AY + PFY +
Sbjct: 183 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 1064 DYE--VNALPQLNT----NVPEVMRRLVAKLLENDPSDRPSAELAA 1103
+E + A + ++ ++ + + + L+E DP+ R + E AA
Sbjct: 230 LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA 275
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 52/202 (25%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+ V +L+ HRDLK +N+L ++ + +++I+DFG S G M +
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEES--KIMISDFGLSKMEGKGDVMSTA 182
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNT 1584
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 183 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDE---- 225
Query: 1585 DYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM 1644
+D+ ++ +YE ++ P + ++ +
Sbjct: 226 ------------------------------NDSKLFEQILKAEYEFDS-PYWD-DISDSA 253
Query: 1645 RRLVAKLLENDPSDRPSAELAA 1666
+ + L+E DP+ R + E AA
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAA 275
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L Y +D +++I+DFG S G M + G +APEV P
Sbjct: 148 PENLLYYSQDEE-SKIMISDFGLSKMEGKGDVMSTAC------GTPGYVAPEVLAQKP-- 198
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNT----NVPEVM 316
YSK+ D W+ G +AY + PFY + +E + A + ++ ++ +
Sbjct: 199 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSA 253
Query: 317 RRLVAKLLENDPSDRPSAELAA 338
+ + L+E DP+ R + E AA
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAA 275
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L Y +D +++I+DFG S G M + G +APEV P
Sbjct: 148 PENLLYYSQDEE-SKIMISDFGLSKMEGKGDVMSTAC------GTPGYVAPEVLAQKP-- 198
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNT----NVPEVM 757
YSK+ D W+ G +AY + PFY + +E + A + ++ ++ +
Sbjct: 199 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSA 253
Query: 758 RRLVAKLLENDPSDRPSAELAA 779
+ + L+E DP+ R + E AA
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAA 275
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 109 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICDFG--YS 163
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 164 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 214
Query: 1055 PFY--QSARNTDYEVNALPQLNTNVPEVM------RRLVAKLLENDPSDRPS 1098
PF + +N ++ + + +P+ + R L++++ DP+ R S
Sbjct: 215 PFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS 266
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 109 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICDFG--YS 163
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 164 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 214
Query: 1576 PF 1577
PF
Sbjct: 215 PF 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICDFG--YS 164
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1055 PFY--QSARNTDYEVNALPQLNTNVPEVM------RRLVAKLLENDPSDRPS 1098
PF + +N ++ + + +P+ + R L++++ DP+ R S
Sbjct: 216 PFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I DFG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICDFG--YS 164
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1576 PF 1577
PF
Sbjct: 216 PF 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 907 GGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAH 963
G + N + I M++ L LR + L +E+ + F Q+LEG+ +L+ ++ H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1023
RD+K DN+L+ + L I+DFG+S +G++ + G + MAPE+
Sbjct: 132 RDIKGDNVLI----NTYSGVLKISDFGTS-KRLAGINPCTET----FTGTLQYMAPEIID 182
Query: 1024 ATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQ--SARNTDYEVNALPQLNTNVPEV 1080
P Y K +D W+ G E+ PFY+ + ++V +++ +PE
Sbjct: 183 KGP-----RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF-KVHPEIPES 236
Query: 1081 M----RRLVAKLLENDPSDRPSA 1099
M + + K E DP R A
Sbjct: 237 MSAEAKAFILKCFEPDPDKRACA 259
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 1428 GGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAH 1484
G + N + I M++ L LR + L +E+ + F Q+LEG+ +L+ ++ H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1544
RD+K DN+L+ + L I+DFG+S +G++ + G + MAPE+
Sbjct: 132 RDIKGDNVLI----NTYSGVLKISDFGTS-KRLAGINPCTET----FTGTLQYMAPEIID 182
Query: 1545 ATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQ 1579
P Y K +D W+ G E+ PFY+
Sbjct: 183 KGP-----RGYGKAADIWSLGCTIIEMATGKPPFYE 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 924 TDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ 983
+ L +L + + M + I + Q +G+ +L+ HRD+KS+NI L +
Sbjct: 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL-----HEGLT 170
Query: 984 LVITDFGSSYTNKSGLSMQYSSADIEL-GGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1041
+ I DFG + T KS S S +E G+V MAPEV + FSF +SD ++
Sbjct: 171 VKIGDFGLA-TVKSRWS---GSQQVEQPTGSVLWMAPEVIRMQDNNPFSF----QSDVYS 222
Query: 1042 AGTVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLEND 1092
G V YE+ + P Y N D Y L +L N P+ M+RLVA ++
Sbjct: 223 YGIVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKV 281
Query: 1093 PSDRP 1097
+RP
Sbjct: 282 KEERP 286
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 49/218 (22%)
Query: 1445 TDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ 1504
+ L +L + + M + I + Q +G+ +L+ HRD+KS+NI L +
Sbjct: 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL-----HEGLT 170
Query: 1505 LVITDFGSSYTNKSGLSMQYSSADIEL-GGNVALMAPEV-ALATPGLFSFVNYSKSDAWT 1562
+ I DFG + T KS S S +E G+V MAPEV + FSF +SD ++
Sbjct: 171 VKIGDFGLA-TVKSRWS---GSQQVEQPTGSVLWMAPEVIRMQDNNPFSF----QSDVYS 222
Query: 1563 AGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQS 1622
G V YE+ + P YSH I D +
Sbjct: 223 YGIVLYELMTGELP---------------------YSH-----------INNRDQIIFMV 250
Query: 1623 ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1660
R Y L +L N P+ M+RLVA ++ +RP
Sbjct: 251 GRG--YASPDLSKLYKNCPKAMKRLVADCVKKVKEERP 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIEL-GGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 278
I DFG + T KS S S +E G+V MAPEV + FSF +SD ++ G
Sbjct: 173 IGDFGLA-TVKSRWS---GSQQVEQPTGSVLWMAPEVIRMQDNNPFSF----QSDVYSYG 224
Query: 279 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 329
V YE+ + P Y N D Y L +L N P+ M+RLVA ++
Sbjct: 225 IVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKE 283
Query: 330 DRP 332
+RP
Sbjct: 284 ERP 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIEL-GGNVALMAPEV-ALATPGLFSFVNYSKSDAWTAG 719
I DFG + T KS S S +E G+V MAPEV + FSF +SD ++ G
Sbjct: 173 IGDFGLA-TVKSRWS---GSQQVEQPTGSVLWMAPEVIRMQDNNPFSF----QSDVYSYG 224
Query: 720 TVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPS 770
V YE+ + P Y N D Y L +L N P+ M+RLVA ++
Sbjct: 225 IVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKE 283
Query: 771 DRP 773
+RP
Sbjct: 284 ERP 286
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 907 GGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAH 963
G + N + I M++ L LR + L +E+ + F Q+LEG+ +L+ ++ H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1023
RD+K DN+L+ + L I+DFG+S +G++ + G + MAPE+
Sbjct: 146 RDIKGDNVLI----NTYSGVLKISDFGTS-KRLAGINPCTET----FTGTLQYMAPEIID 196
Query: 1024 ATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQ--SARNTDYEVNALPQLNTNVPEV 1080
P Y K +D W+ G E+ PFY+ + ++V +++ +PE
Sbjct: 197 KGP-----RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF-KVHPEIPES 250
Query: 1081 M----RRLVAKLLENDPSDRPSA 1099
M + + K E DP R A
Sbjct: 251 MSAEAKAFILKCFEPDPDKRACA 273
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 1428 GGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAH 1484
G + N + I M++ L LR + L +E+ + F Q+LEG+ +L+ ++ H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1544
RD+K DN+L+ + L I+DFG+S +G++ + G + MAPE+
Sbjct: 146 RDIKGDNVLI----NTYSGVLKISDFGTS-KRLAGINPCTET----FTGTLQYMAPEIID 196
Query: 1545 ATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQ 1579
P Y K +D W+ G E+ PFY+
Sbjct: 197 KGP-----RGYGKAADIWSLGCTIIEMATGKPPFYE 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q+L G T+L+ H HRDLK +N+LL+ + ++V DFG S + G M+
Sbjct: 125 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV--DFGLSAHFEVGGKMK- 181
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 1063
E G +APEV K D W+ G + Y + PF T
Sbjct: 182 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYILLCGYPPF---GGQT 226
Query: 1064 DYEV---------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
D E+ + P T V + ++LV +L +PS R SAE A
Sbjct: 227 DQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEA 274
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q+L G T+L+ H HRDLK +N+LL+ + ++V DFG S + G M+
Sbjct: 125 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV--DFGLSAHFEVGGKMK- 181
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
E G +APEV K D W+ G + Y + PF
Sbjct: 182 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYILLCGYPPF 222
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 240 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 299
SA E+GG + P + K D W+ G + Y + PF TD
Sbjct: 171 SAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF---GGQTD 227
Query: 300 YEV---------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 337
E+ + P T V + ++LV +L +PS R SAE A
Sbjct: 228 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEA 274
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 681 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 740
SA E+GG + P + K D W+ G + Y + PF TD
Sbjct: 171 SAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF---GGQTD 227
Query: 741 YEV---------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 778
E+ + P T V + ++LV +L +PS R SAE A
Sbjct: 228 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEA 274
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 931 RERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
RERC + R + ++ + +L+ +RDLK +NILLD +V+TDF
Sbjct: 132 RERCF---LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-----HIVLTDF 183
Query: 990 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE 1048
G N ++++S G +APEV P Y ++ D W G V YE
Sbjct: 184 GLCKEN-----IEHNSTTSTFCGTPEYLAPEVLHKQP-------YDRTVDWWCLGAVLYE 231
Query: 1049 IFGHDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ PFY +RNT D +N QL N+ R L+ LL+ D + R A+
Sbjct: 232 MLYGLPPFY--SRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK 285
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 1452 RERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
RERC + R + ++ + +L+ +RDLK +NILLD +V+TDF
Sbjct: 132 RERCF---LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-----HIVLTDF 183
Query: 1511 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE 1569
G N ++++S G +APEV P Y ++ D W G V YE
Sbjct: 184 GLCKEN-----IEHNSTTSTFCGTPEYLAPEVLHKQP-------YDRTVDWWCLGAVLYE 231
Query: 1570 IFGHDNPFYQSARNT 1584
+ PFY +RNT
Sbjct: 232 MLYGLPPFY--SRNT 244
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWT 276
+V+TDFG N ++++S G +APEV P Y ++ D W
Sbjct: 177 HIVLTDFGLCKEN-----IEHNSTTSTFCGTPEYLAPEVLHKQP-------YDRTVDWWC 224
Query: 277 AGTVAYEIFGHDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 332
G V YE+ PFY +RNT D +N QL N+ R L+ LL+ D + R
Sbjct: 225 LGAVLYEMLYGLPPFY--SRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL 282
Query: 333 SAE 335
A+
Sbjct: 283 GAK 285
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWT 717
+V+TDFG N ++++S G +APEV P Y ++ D W
Sbjct: 177 HIVLTDFGLCKEN-----IEHNSTTSTFCGTPEYLAPEVLHKQP-------YDRTVDWWC 224
Query: 718 AGTVAYEIFGHDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 773
G V YE+ PFY +RNT D +N QL N+ R L+ LL+ D + R
Sbjct: 225 LGAVLYEMLYGLPPFY--SRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL 282
Query: 774 SAE 776
A+
Sbjct: 283 GAK 285
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTXXKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 259
Query: 1099 AELAATV 1105
EL A +
Sbjct: 260 TELKAQL 266
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTXXKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1565 TVAYEIFGHDNPFYQSARNTDYWHR 1589
+EI H +Q +N D R
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGR 224
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTXXKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTXXKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 89 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1029
D+ + +TDFG S G ++ E+ G + +APE+ + PG
Sbjct: 146 ---DDM--NIKLTDFGFSCQLDPGEKLR------EVCGTPSYLAPEIIECSMNDNHPG-- 192
Query: 1030 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR--------NTDYEVNALPQLNTNVPEV 1080
Y K D W+ G + Y + PF+ + + +Y+ + P+ + + +
Sbjct: 193 ----YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS-PEWD-DYSDT 246
Query: 1081 MRRLVAKLLENDPSDRPSAELA 1102
++ LV++ L P R +AE A
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEA 268
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 35/163 (21%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 89 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1550
D+ + +TDFG S G ++ E+ G + +APE+ + PG
Sbjct: 146 ---DDM--NIKLTDFGFSCQLDPGEKLR------EVCGTPSYLAPEIIECSMNDNHPG-- 192
Query: 1551 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
Y K D W+ G + Y + PF WHRK +
Sbjct: 193 ----YGKEVDMWSTGVIMYTLLAGSPPF---------WHRKQM 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 57/237 (24%)
Query: 871 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 930
HPN++ +H D + D LI +GG +L ++L
Sbjct: 88 HPNIITLH----DIFENKTDVVLILELV-------SGG----------------ELFDFL 120
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
E+ + L+ E Q+L+GV +L+ R AH DLK +NI+L ++ P++ + DFG
Sbjct: 121 AEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML-LDKNVPNPRIKLIDFG 178
Query: 991 SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEI 1049
++ ++G + + G +APE+ P GL ++D W+ G + Y +
Sbjct: 179 IAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYIL 225
Query: 1050 FGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
+PF SA N D++ + +N E+ + + +LL DP R
Sbjct: 226 LSGASPFLGETKQETLTNISAVNYDFD----EEYFSNTSELAKDFIRRLLVKDPKRR 278
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 43/187 (22%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HPN++ +H D + D LI +GG +L ++L
Sbjct: 88 HPNIITLH----DIFENKTDVVLILELV-------SGG----------------ELFDFL 120
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E+ + L+ E Q+L+GV +L+ R AH DLK +NI+L ++ P++ + DFG
Sbjct: 121 AEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML-LDKNVPNPRIKLIDFG 178
Query: 1512 SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEI 1570
++ ++G + + G +APE+ P GL ++D W+ G + Y +
Sbjct: 179 IAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYIL 225
Query: 1571 FGHDNPF 1577
+PF
Sbjct: 226 LSGASPF 232
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 210
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 211 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 259
Query: 313 PEVMRRLVAKLLENDPSDR 331
E+ + + +LL DP R
Sbjct: 260 SELAKDFIRRLLVKDPKRR 278
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P++ + DFG ++ ++G + + G +APE+ P G
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEFVAPEIVNYEPLG 210
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N D++ + +N
Sbjct: 211 L-------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSNT 259
Query: 754 PEVMRRLVAKLLENDPSDR 772
E+ + + +LL DP R
Sbjct: 260 SELAKDFIRRLLVKDPKRR 278
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 102 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1029
D+ + +TDFG S G ++ E+ G + +APE+ + PG
Sbjct: 159 ---DDM--NIKLTDFGFSCQLDPGEKLR------EVCGTPSYLAPEIIECSMNDNHPG-- 205
Query: 1030 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR--------NTDYEVNALPQLNTNVPEV 1080
Y K D W+ G + Y + PF+ + + +Y+ + P+ + + +
Sbjct: 206 ----YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS-PEWD-DYSDT 259
Query: 1081 MRRLVAKLLENDPSDRPSAELA 1102
++ LV++ L P R +AE A
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEA 281
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 35/163 (21%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 102 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1550
D+ + +TDFG S G ++ E+ G + +APE+ + PG
Sbjct: 159 ---DDM--NIKLTDFGFSCQLDPGEKLR------EVCGTPSYLAPEIIECSMNDNHPG-- 205
Query: 1551 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
Y K D W+ G + Y + PF WHRK +
Sbjct: 206 ----YGKEVDMWSTGVIMYTLLAGSPPF---------WHRKQM 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 124 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 180
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 181 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 227
Query: 1044 TVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 228 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 287
Query: 1099 AELAATV 1105
EL A +
Sbjct: 288 TELKAQL 294
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 124 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 180
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 181 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 227
Query: 1565 TVAYEIFGHDNPFYQSARNTDYWHR 1589
+EI H +Q +N D R
Sbjct: 228 VCMWEILMHGVKPFQGVKNNDVIGR 252
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 175 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 221
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 281
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 282 SRRPRFTELKAQL 294
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 175 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 221
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 281
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 282 SRRPRFTELKAQL 294
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 101 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 158 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 204
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 264
Query: 1099 AELAATV 1105
EL A +
Sbjct: 265 TELKAQL 271
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 101 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 158 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 204
Query: 1565 TVAYEIFGHDNPFYQSARNTDYWHR 1589
+EI H +Q +N D R
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGR 229
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 152 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 198
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 258
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 259 SRRPRFTELKAQL 271
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 152 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 198
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 258
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 259 SRRPRFTELKAQL 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1044 TVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 259
Query: 1099 AELAATV 1105
EL A +
Sbjct: 260 TELKAQL 266
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 200 VCMWEILMHGVKPFQGVKNND 220
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1044 TVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 259
Query: 1099 AELAATV 1105
EL A +
Sbjct: 260 TELKAQL 266
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 152
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 200 VCMWEILMHGVKPFQGVKNND 220
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 147 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 193
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 254 SRRPRFTELKAQL 266
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 34/193 (17%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q+L G T+L+ H HRDLK +N+LL+ + ++V DFG S + G M+
Sbjct: 108 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV--DFGLSAHFEVGGKMK- 164
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 1063
E G +APEV K D W+ G + Y + PF T
Sbjct: 165 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYILLCGYPPF---GGQT 209
Query: 1064 DYEVNALPQLN---------TNVPEVMRRLVAKLLENDPSDRPSAELA------ATVC-Q 1107
D E+ + T V + ++LV +L +PS R SAE A C Q
Sbjct: 210 DQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQ 269
Query: 1108 LYLWAPKHWLYGA 1120
+ KH L GA
Sbjct: 270 KHTDVGKHALTGA 282
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q+L G T+L+ H HRDLK +N+LL+ + ++V DFG S + G M+
Sbjct: 108 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV--DFGLSAHFEVGGKMK- 164
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
E G +APEV K D W+ G + Y + PF
Sbjct: 165 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYILLCGYPPF 205
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 240 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 299
SA E+GG + P + K D W+ G + Y + PF TD
Sbjct: 154 SAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF---GGQTD 210
Query: 300 YEVNALPQLN---------TNVPEVMRRLVAKLLENDPSDRPSAELA------ATVC-QL 343
E+ + T V + ++LV +L +PS R SAE A C Q
Sbjct: 211 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 270
Query: 344 YLWAPKHWLYGA 355
+ KH L GA
Sbjct: 271 HTDVGKHALTGA 282
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 681 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 740
SA E+GG + P + K D W+ G + Y + PF TD
Sbjct: 154 SAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF---GGQTD 210
Query: 741 YEVNALPQLN---------TNVPEVMRRLVAKLLENDPSDRPSAELA------ATVC-QL 784
E+ + T V + ++LV +L +PS R SAE A C Q
Sbjct: 211 QEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 270
Query: 785 YLWAPKHWLYGA 796
+ KH L GA
Sbjct: 271 HTDVGKHALTGA 282
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ ++LEG+ +L+ + HRD+K+ NILL ED + + I DFG S +G + +
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILL--GEDGS---VQIADFGVSAFLATGGDITRN 175
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV G + F K+D W+ G A E+ P+++
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGITAIELATGAAPYHKYPPMKV 230
Query: 1065 YEV---NALPQLNTNVPE---------VMRRLVAKLLENDPSDRPSA 1099
+ N P L T V + R++++ L+ DP RP+A
Sbjct: 231 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA 277
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ ++LEG+ +L+ + HRD+K+ NILL ED + + I DFG S +G + +
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILL--GEDGS---VQIADFGVSAFLATGGDITRN 175
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
G MAPEV G + F K+D W+ G A E+ P+++
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGITAIELATGAAPYHK 224
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 280
I DFG S +G + + G MAPEV G + F K+D W+ G
Sbjct: 157 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGIT 211
Query: 281 AYEIFGHDNPFYQSARNTDYEV---NALPQLNTNVPE---------VMRRLVAKLLENDP 328
A E+ P+++ + N P L T V + R++++ L+ DP
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 271
Query: 329 SDRPSA 334
RP+A
Sbjct: 272 EKRPTA 277
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 721
I DFG S +G + + G MAPEV G + F K+D W+ G
Sbjct: 157 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGIT 211
Query: 722 AYEIFGHDNPFYQSARNTDYEV---NALPQLNTNVPE---------VMRRLVAKLLENDP 769
A E+ P+++ + N P L T V + R++++ L+ DP
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 271
Query: 770 SDRPSA 775
RP+A
Sbjct: 272 EKRPTA 277
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 99 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 155
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 156 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 202
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 203 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 262
Query: 1099 AELAATV 1105
EL A +
Sbjct: 263 TELKAQL 269
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 99 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 155
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 156 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 202
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 203 VCMWEILMHGVKPFQGVKNND 223
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 150 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 196
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 256
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 257 SRRPRFTELKAQL 269
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 150 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 196
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 256
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 257 SRRPRFTELKAQL 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 93 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 149
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 150 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 196
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 197 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 256
Query: 1099 AELAATV 1105
EL A +
Sbjct: 257 TELKAQL 263
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 93 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 149
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 150 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 196
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 197 VCMWEILMHGVKPFQGVKNND 217
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 144 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 190
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 250
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 251 SRRPRFTELKAQL 263
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 144 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 190
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 250
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 251 SRRPRFTELKAQL 263
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 98 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 154
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 155 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 201
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 202 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 261
Query: 1099 AELAATV 1105
EL A +
Sbjct: 262 TELKAQL 268
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 98 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 154
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 155 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 201
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 202 VCMWEILMHGVKPFQGVKNND 222
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 149 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 195
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 255
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 256 SRRPRFTELKAQL 268
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 149 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 195
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 255
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 256 SRRPRFTELKAQL 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDL 966
+ N SL+I+M DL + + L ++IL F Q+ + H++ + HRD+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI 151
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
KS NI L ++D T + + DFG + S + + + G ++PE+ P
Sbjct: 152 KSQNIFL--TKDGT---VQLGDFGIARVLNSTVELARACI-----GTPYYLSPEICENKP 201
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEVMRR 1083
+KSD W G V YE+ + F S +N ++ + P ++ + +R
Sbjct: 202 ------YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRS 255
Query: 1084 LVAKLLENDPSDRPS 1098
LV++L + +P DRPS
Sbjct: 256 LVSQLFKRNPRDRPS 270
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDL 1487
+ N SL+I+M DL + + L ++IL F Q+ + H++ + HRD+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI 151
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
KS NI L ++D T + + DFG + S + + + G ++PE+ P
Sbjct: 152 KSQNIFL--TKDGT---VQLGDFGIARVLNSTVELARACI-----GTPYYLSPEICENKP 201
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEI 1570
+KSD W G V YE+
Sbjct: 202 ------YNNKSDIWALGCVLYEL 218
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 203 IPDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 262
I ++ KD T + + DFG + S + + + G ++PE+ P
Sbjct: 151 IKSQNIFLTKDGT---VQLGDFGIARVLNSTVELARACI-----GTPYYLSPEICENKP- 201
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEVMRRL 319
+KSD W G V YE+ + F S +N ++ + P ++ + +R L
Sbjct: 202 -----YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSL 256
Query: 320 VAKLLENDPSDRPS 333
V++L + +P DRPS
Sbjct: 257 VSQLFKRNPRDRPS 270
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 644 IPDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 703
I ++ KD T + + DFG + S + + + G ++PE+ P
Sbjct: 151 IKSQNIFLTKDGT---VQLGDFGIARVLNSTVELARACI-----GTPYYLSPEICENKP- 201
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEVMRRL 760
+KSD W G V YE+ + F S +N ++ + P ++ + +R L
Sbjct: 202 -----YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSL 256
Query: 761 VAKLLENDPSDRPS 774
V++L + +P DRPS
Sbjct: 257 VSQLFKRNPRDRPS 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ ++LEG+ +L+ + HRD+K+ NILL ED + + I DFG S +G + +
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILL--GEDGS---VQIADFGVSAFLATGGDITRN 180
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV G + F K+D W+ G A E+ P+++
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGITAIELATGAAPYHKYPPMKV 235
Query: 1065 YEV---NALPQLNTNVPE---------VMRRLVAKLLENDPSDRPSA 1099
+ N P L T V + R++++ L+ DP RP+A
Sbjct: 236 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA 282
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ ++LEG+ +L+ + HRD+K+ NILL ED + + I DFG S +G + +
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILL--GEDGS---VQIADFGVSAFLATGGDITRN 180
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
G MAPEV G + F K+D W+ G A E+ P+++
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGITAIELATGAAPYHK 229
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 280
I DFG S +G + + G MAPEV G + F K+D W+ G
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGIT 216
Query: 281 AYEIFGHDNPFYQSARNTDYEV---NALPQLNTNVPE---------VMRRLVAKLLENDP 328
A E+ P+++ + N P L T V + R++++ L+ DP
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 276
Query: 329 SDRPSA 334
RP+A
Sbjct: 277 EKRPTA 282
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 721
I DFG S +G + + G MAPEV G + F K+D W+ G
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDF----KADIWSFGIT 216
Query: 722 AYEIFGHDNPFYQSARNTDYEV---NALPQLNTNVPE---------VMRRLVAKLLENDP 769
A E+ P+++ + N P L T V + R++++ L+ DP
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 276
Query: 770 SDRPSA 775
RP+A
Sbjct: 277 EKRPTA 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY------ 1057
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 1058 --QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 1115
+ +YE ++ P + ++ + + + L+E DP R C+ L P
Sbjct: 226 LFEQILKAEYEFDS-PYWD-DISDSAKDFIRHLMEKDPEKR-------FTCEQALQHP-- 274
Query: 1116 WLYGATPSHNEIMQ 1129
W+ G T I Q
Sbjct: 275 WIAGDTALDKNIHQ 288
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFY 219
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 314
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 315 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 364
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 755
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 756 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 805
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY------ 1057
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 1058 --QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 1115
+ +YE ++ P + ++ + + + L+E DP R C+ L P
Sbjct: 226 LFEQILKAEYEFDS-PYWD-DISDSAKDFIRHLMEKDPEKR-------FTCEQALQHP-- 274
Query: 1116 WLYGATPSHNEIMQ 1129
W+ G T I Q
Sbjct: 275 WIAGDTALDKNIHQ 288
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFY 219
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 314
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 315 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 364
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 755
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 756 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 805
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY------ 1057
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 1058 --QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 1115
+ +YE ++ P + ++ + + + L+E DP R C+ L P
Sbjct: 226 LFEQILKAEYEFDS-PYWD-DISDSAKDFIRHLMEKDPEKR-------FTCEQALQHP-- 274
Query: 1116 WLYGATPSHNEIMQ 1129
W+ G T I Q
Sbjct: 275 WIAGDTALDKNIHQ 288
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFY 219
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 314
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 315 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 364
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDED-SKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 755
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 756 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 805
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 31/160 (19%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
++ G+ L+ R +RDLK +NILLD D G + GL++
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLD-------------DHGHIRISDLGLAVHVPEG 339
Query: 1007 DIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G G V MAPEV FS D W G + YE+ +PF Q +
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFS------PDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 1065 YEVNALPQLNTNVPE--------VMRRLVAKLLENDPSDR 1096
E + +L VPE R L ++LL DP++R
Sbjct: 394 RE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 21/118 (17%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
++ G+ L+ R +RDLK +NILLD D G + GL++
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLD-------------DHGHIRISDLGLAVHVPEG 339
Query: 1528 DIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G G V MAPEV FS D W G + YE+ +PF Q +
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFS------PDWWALGCLLYEMIAGQSPFQQRKKK 391
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 219 LVITDFGSSYTNKSGLSMQYSSADIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWT 276
+++ D G + GL++ G G V MAPEV FS D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS------PDWWA 370
Query: 277 AGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE--------VMRRLVAKLLENDP 328
G + YE+ +PF Q + E + +L VPE R L ++LL DP
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKRE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
Query: 329 SDR 331
++R
Sbjct: 429 AER 431
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 660 LVITDFGSSYTNKSGLSMQYSSADIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWT 717
+++ D G + GL++ G G V MAPEV FS D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS------PDWWA 370
Query: 718 AGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE--------VMRRLVAKLLENDP 769
G + YE+ +PF Q + E + +L VPE R L ++LL DP
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKRE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
Query: 770 SDR 772
++R
Sbjct: 429 AER 431
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 915 LFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
L+++M+ Y DL L + ++ +++ + ++ HRD+K DNILL
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D C + + DFGS ++ +++ A G ++PE+ A G +
Sbjct: 196 D-----RCGHIRLADFGSCLKLRADGTVRSLVA----VGTPDYLSPEILQAVGGGPGTGS 246
Query: 1034 YS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQLNTNVPEVMRRLV 1085
Y + D W G AYE+F PFY + Y E +LP ++ VPE R +
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
Query: 1086 AKLL 1089
+LL
Sbjct: 307 QRLL 310
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 1436 LFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
L+++M+ Y DL L + ++ +++ + ++ HRD+K DNILL
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D C + + DFGS ++ +++ A G ++PE+ A G +
Sbjct: 196 D-----RCGHIRLADFGSCLKLRADGTVRSLVA----VGTPDYLSPEILQAVGGGPGTGS 246
Query: 1555 YS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
Y + D W G AYE+F PFY + Y
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETY 279
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
PD+ L+ + C + + DFGS ++ +++ A G ++PE+ A G
Sbjct: 190 PDNILL----DRCGHIRLADFGSCLKLRADGTVRSLVA----VGTPDYLSPEILQAVGGG 241
Query: 264 FSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQLNTNVPEV 315
+Y + D W G AYE+F PFY + Y E +LP ++ VPE
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301
Query: 316 MRRLVAKLL 324
R + +LL
Sbjct: 302 ARDFIQRLL 310
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
PD+ L+ + C + + DFGS ++ +++ A G ++PE+ A G
Sbjct: 190 PDNILL----DRCGHIRLADFGSCLKLRADGTVRSLVA----VGTPDYLSPEILQAVGGG 241
Query: 705 FSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQLNTNVPEV 756
+Y + D W G AYE+F PFY + Y E +LP ++ VPE
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301
Query: 757 MRRLVAKLL 765
R + +LL
Sbjct: 302 ARDFIQRLL 310
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 64/259 (24%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY------ 1057
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDENDAK 225
Query: 1058 --QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 1115
+ +YE ++ P + ++ + + + L+E DP R C+ L P
Sbjct: 226 LFEQILKAEYEFDS-PYWD-DISDSAKDFIRHLMEKDPEKR-------FTCEQALQHP-- 274
Query: 1116 WLYGATPSHNEIMQWLLTLTTKVLCTGVSYGGHVRRTFVEYQLISTFLKRAEFRLITNAL 1175
W+ G T I Q S +++ F + + F A
Sbjct: 275 WIAGDTALDKNIHQ--------------SVSEQIKKNFAKSKWKQAFNATA--------- 311
Query: 1176 QYIQRLLVRYIKPLQPGHK 1194
+VR+++ LQ GH+
Sbjct: 312 ------VVRHMRKLQLGHQ 324
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 61/228 (26%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+ V +L+ HRDLK +N+L ++++ +++I+DFG S G + +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--KIMISDFGLSKMEDPGSVLSTA 178
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNT 1584
G +APEV P YSK+ D W+ G +AY + PFY
Sbjct: 179 C------GTPGYVAPEVLAQKP-------YSKAVDCWSIGVIAYILLCGYPPFYDE---- 221
Query: 1585 DYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM 1644
+D ++ +YE ++ P + ++ +
Sbjct: 222 ------------------------------NDAKLFEQILKAEYEFDS-PYWD-DISDSA 249
Query: 1645 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 1692
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 250 KDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 92/247 (37%), Gaps = 69/247 (27%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDEDS-KIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 314
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 315 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLTLTTKVL 374
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ---------- 288
Query: 375 CTGVSYGGHVRRTFVEYQLISTFLKRAEFRLITNALQYIQRLLVRYIKPLQPGHKIEFLT 434
S +++ F + + F A +VR+++ LQ GH
Sbjct: 289 ----SVSEQIKKNFAKSKWKQAFNATA---------------VVRHMRKLQLGH------ 323
Query: 435 QPPATSS 441
QP T +
Sbjct: 324 QPGGTGT 330
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L Y D +++I+DFG S G + + G +APEV P
Sbjct: 144 PENLLYYSLDEDS-KIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPEVLAQKP-- 194
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY--------QSARNTDYEVNALPQLNTNVPE 755
YSK+ D W+ G +AY + PFY + +YE ++ P + ++ +
Sbjct: 195 -----YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS-PYWD-DISD 247
Query: 756 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQ 805
+ + L+E DP R C+ L P W+ G T I Q
Sbjct: 248 SAKDFIRHLMEKDPEKR-------FTCEQALQHP--WIAGDTALDKNIHQ 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 31/160 (19%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
++ G+ L+ R +RDLK +NILLD D G + GL++
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLD-------------DHGHIRISDLGLAVHVPEG 339
Query: 1007 DIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G G V MAPEV FS D W G + YE+ +PF Q +
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFS------PDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 1065 YEVNALPQLNTNVPE--------VMRRLVAKLLENDPSDR 1096
E + +L VPE R L ++LL DP++R
Sbjct: 394 RE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 21/118 (17%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
++ G+ L+ R +RDLK +NILLD D G + GL++
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLD-------------DHGHIRISDLGLAVHVPEG 339
Query: 1528 DIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G G V MAPEV FS D W G + YE+ +PF Q +
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFS------PDWWALGCLLYEMIAGQSPFQQRKKK 391
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 219 LVITDFGSSYTNKSGLSMQYSSADIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWT 276
+++ D G + GL++ G G V MAPEV FS D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS------PDWWA 370
Query: 277 AGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE--------VMRRLVAKLLENDP 328
G + YE+ +PF Q + E + +L VPE R L ++LL DP
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKRE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
Query: 329 SDR 331
++R
Sbjct: 429 AER 431
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 660 LVITDFGSSYTNKSGLSMQYSSADIELG--GNVALMAPEVALATPGLFSFVNYSKSDAWT 717
+++ D G + GL++ G G V MAPEV FS D W
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS------PDWWA 370
Query: 718 AGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE--------VMRRLVAKLLENDP 769
G + YE+ +PF Q + E + +L VPE R L ++LL DP
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKRE--EVERLVKEVPEEYSERFSPQARSLCSQLLCKDP 428
Query: 770 SDR 772
++R
Sbjct: 429 AER 431
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ ++ C +L
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKL 152
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1044 TVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 200 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 259
Query: 1099 AELAATV 1105
EL A +
Sbjct: 260 TELKAQL 266
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ ++ C +L
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKL 152
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 153 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 199
Query: 1565 TVAYEIFGHDNPFYQSARNTD 1585
+EI H +Q +N D
Sbjct: 200 VCMWEILMHGVKPFQGVKNND 220
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 270 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLE 325
S SD W G +EI H +Q +N D E + N P + L+ K
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWA 250
Query: 326 NDPSDRPS-AELAATV 340
DPS RP EL A +
Sbjct: 251 YDPSRRPRFTELKAQL 266
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 711 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLE 766
S SD W G +EI H +Q +N D E + N P + L+ K
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWA 250
Query: 767 NDPSDRPS-AELAATV 781
DPS RP EL A +
Sbjct: 251 YDPSRRPRFTELKAQL 266
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I FG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICAFG--YS 164
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1055 PFY--QSARNTDYEVNALPQLNTNVPEVM------RRLVAKLLENDPSDRPS 1098
PF + +N ++ + + +P+ + R L++++ DP+ R S
Sbjct: 216 PFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I FG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICAFG--YS 164
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
S L Q S G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPKST----VGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1576 PF 1577
PF
Sbjct: 216 PF 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 308
Query: 1004 SSADIELGGNVALMAPE--VALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-- 1058
+S L G +APE V++ T G Y+++ D W+ G + + PF +
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSEHR 362
Query: 1059 -----SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 363 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 411
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 308
Query: 1525 SSADIELGGNVALMAPE--VALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA 1581
+S L G +APE V++ T G Y+++ D W+ G + + PF +
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSE-- 360
Query: 1582 RNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVP 1641
HR T ++ +I T + N +P++ V
Sbjct: 361 ------HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVS 387
Query: 1642 EVMRRLVAKLLENDPSDRPSAELA 1665
E LV KLL DP R + E A
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEA 411
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV--ALATP 261
P++ L+ ++ C + ITDFG S + +S L G +APEV ++ T
Sbjct: 281 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 262 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVP 313
G Y+++ D W+ G + + PF + + T + N +P++ V
Sbjct: 334 G------YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 314 EVMRRLVAKLLENDPSDRPSAELA 337
E LV KLL DP R + E A
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEA 411
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV--ALATP 702
P++ L+ ++ C + ITDFG S + +S L G +APEV ++ T
Sbjct: 281 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 703 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVP 754
G Y+++ D W+ G + + PF + + T + N +P++ V
Sbjct: 334 G------YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 755 EVMRRLVAKLLENDPSDRPSAELA 778
E LV KLL DP R + E A
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEA 411
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 175
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ---- 1058
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 231
Query: 1059 ---SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 232 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 278
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 175
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSE---- 227
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
HR T ++ +I T + N +P++ V E
Sbjct: 228 ----HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVSEK 256
Query: 1644 MRRLVAKLLENDPSDRPSAELA 1665
LV KLL DP R + E A
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEA 278
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 148 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 197
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 315
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 198 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 256
Query: 316 MRRLVAKLLENDPSDRPSAELA 337
LV KLL DP R + E A
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEA 278
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 148 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 197
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 756
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 198 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 256
Query: 757 MRRLVAKLLENDPSDRPSAELA 778
LV KLL DP R + E A
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEA 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ---- 1058
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
Query: 1059 ---SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 226 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSE---- 221
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
HR T ++ +I T + N +P++ V E
Sbjct: 222 ----HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVSEK 250
Query: 1644 MRRLVAKLLENDPSDRPSAELA 1665
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 315
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 316 MRRLVAKLLENDPSDRPSAELA 337
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 756
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 757 MRRLVAKLLENDPSDRPSAELA 778
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FILM+ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FILM+ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FILM+ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 164 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 211
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 212 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPN 291
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FILM+ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 164 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 211
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 212 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 221
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 222 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 277
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 278 MTQCWQHQPEDRPN 291
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 221
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 222 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 277
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 278 MTQCWQHQPEDRPN 291
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q+L GVT+L+ H HRDLK +N+LL+ E + ++V DFG S ++ M+
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV--DFGLSAVFENQKKMK- 196
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV------AYEIFG--HDNP 1055
E G +APEV K D W+ G + Y FG D
Sbjct: 197 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSIGVILFILLAGYPPFGGQTDQE 244
Query: 1056 FYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ Y ++ P+ NV E + L+ ++L+ D R SA+ A
Sbjct: 245 ILRKVEKGKYTFDS-PEWK-NVSEGAKDLIKQMLQFDSQRRISAQQA 289
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q+L GVT+L+ H HRDLK +N+LL+ E + ++V DFG S ++ M+
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV--DFGLSAVFENQKKMK- 196
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
E G +APEV K D W+ G + + + PF
Sbjct: 197 -----ERLGTAYYIAPEVLRKKYD-------EKCDVWSIGVILFILLAGYPPF 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 294
Query: 1004 SSADIELGGNVALMAPE--VALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-- 1058
+S L G +APE V++ T G Y+++ D W+ G + + PF +
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSEHR 348
Query: 1059 -----SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 349 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 52/204 (25%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 294
Query: 1525 SSADIELGGNVALMAPE--VALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA 1581
+S L G +APE V++ T G Y+++ D W+ G + + PF +
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSE-- 346
Query: 1582 RNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVP 1641
HR T ++ +I T + N +P++ V
Sbjct: 347 ------HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVS 373
Query: 1642 EVMRRLVAKLLENDPSDRPSAELA 1665
E LV KLL DP R + E A
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEA 397
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV--ALATP 261
P++ L+ ++ C + ITDFG S + +S L G +APEV ++ T
Sbjct: 267 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 262 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVP 313
G Y+++ D W+ G + + PF + + T + N +P++ V
Sbjct: 320 G------YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 314 EVMRRLVAKLLENDPSDRPSAELA 337
E LV KLL DP R + E A
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEA 397
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV--ALATP 702
P++ L+ ++ C + ITDFG S + +S L G +APEV ++ T
Sbjct: 267 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 703 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVP 754
G Y+++ D W+ G + + PF + + T + N +P++ V
Sbjct: 320 G------YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 755 EVMRRLVAKLLENDPSDRPSAELA 778
E LV KLL DP R + E A
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEA 397
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ---- 1058
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
Query: 1059 ---SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 226 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSE---- 221
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
HR T ++ +I T + N +P++ V E
Sbjct: 222 ----HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVSEK 250
Query: 1644 MRRLVAKLLENDPSDRPSAELA 1665
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 315
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 316 MRRLVAKLLENDPSDRPSAELA 337
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 756
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 757 MRRLVAKLLENDPSDRPSAELA 778
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ---- 1058
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
Query: 1059 ---SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 226 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 169
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSE---- 221
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
HR T ++ +I T + N +P++ V E
Sbjct: 222 ----HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVSEK 250
Query: 1644 MRRLVAKLLENDPSDRPSAELA 1665
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 315
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 316 MRRLVAKLLENDPSDRPSAELA 337
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 142 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 191
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 756
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 192 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 757 MRRLVAKLLENDPSDRPSAELA 778
LV KLL DP R + E A
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEA 272
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 30/160 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HRD+K +N+LL S++N+ P + + DF G+++Q +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLL-ASKENSAP-VKLGDF--------GVAIQLGESG 187
Query: 1008 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR-- 1061
+ GG V MAPEV P Y K D W G + + + PFY +
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
Query: 1062 -----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
Y++N P+ +++ E + LV ++L DP++R
Sbjct: 241 FEGIIKGKYKMN--PRQWSHISESAKDLVRRMLMLDPAER 278
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HRD+K +N+LL S++N+ P + + DF G+++Q +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLL-ASKENSAP-VKLGDF--------GVAIQLGESG 187
Query: 1529 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+ GG V MAPEV P Y K D W G + + + PFY
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 168
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ---- 1058
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
Query: 1059 ---SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ T + N +P++ V E LV KLL DP R + E A
Sbjct: 225 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 271
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L F Q+L V +L+ + HRDLK +N+LL E++ + ITDFG S +
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKI------LGE 168
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
+S L G +APEV ++ Y+++ D W+ G + + PF +
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSV----GTAGYNRAVDCWSLGVILFICLSGYPPFSE---- 220
Query: 1584 TDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV 1643
HR T ++ +I T + N +P++ V E
Sbjct: 221 ----HR--------------TQVSLKDQI-------------TSGKYNFIPEVWAEVSEK 249
Query: 1644 MRRLVAKLLENDPSDRPSAELA 1665
LV KLL DP R + E A
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEA 271
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 141 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 190
Query: 264 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 315
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 191 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 249
Query: 316 MRRLVAKLLENDPSDRPSAELA 337
LV KLL DP R + E A
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEA 271
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
P++ L+ ++ C + ITDFG S + +S L G +APEV ++
Sbjct: 141 PENVLLSSQEEDC-LIKITDFGHSKI------LGETSLMRTLCGTPTYLAPEVLVSV--- 190
Query: 705 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQ-------SARNTDYEVNALPQLNTNVPEV 756
Y+++ D W+ G + + PF + + T + N +P++ V E
Sbjct: 191 -GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 249
Query: 757 MRRLVAKLLENDPSDRPSAELA 778
LV KLL DP R + E A
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEA 271
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 532
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 533 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 579
Query: 1044 TVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 639
Query: 1099 AELAATV 1105
EL A +
Sbjct: 640 TELKAQL 646
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ N C +L
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKL 532
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 533 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 579
Query: 1565 TVAYEIFGHDNPFYQSARNTDYWHR 1589
+EI H +Q +N D R
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGR 604
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 272
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 527 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 573
Query: 273 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 328
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 633
Query: 329 SDRPS-AELAATV 340
S RP EL A +
Sbjct: 634 SRRPRFTELKAQL 646
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 19/133 (14%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKS 713
N C +L DFG S + + S + + MAPE +F + S S
Sbjct: 527 NDCVKL--GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSAS 573
Query: 714 DAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 769
D W G +EI H +Q +N D E + N P + L+ K DP
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 633
Query: 770 SDRPS-AELAATV 781
S RP EL A +
Sbjct: 634 SRRPRFTELKAQL 646
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 36/202 (17%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 102 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1029
D+ + +TDFG S G ++ + G + +APE+ + PG
Sbjct: 159 ---DDM--NIKLTDFGFSCQLDPGEKLR------SVCGTPSYLAPEIIECSMNDNHPG-- 205
Query: 1030 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR--------NTDYEVNALPQLNTNVPEV 1080
Y K D W+ G + Y + PF+ + + +Y+ + P+ + + +
Sbjct: 206 ----YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS-PEWD-DYSDT 259
Query: 1081 MRRLVAKLLENDPSDRPSAELA 1102
++ LV++ L P R +AE A
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEA 281
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 35/163 (21%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F LMKK +L +YL E+ LS E + LLE + L+ HRDLK +NILLD
Sbjct: 102 VFDLMKK--GELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-----PGLF 1550
D+ + +TDFG S G ++ + G + +APE+ + PG
Sbjct: 159 ---DDM--NIKLTDFGFSCQLDPGEKLR------SVCGTPSYLAPEIIECSMNDNHPG-- 205
Query: 1551 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
Y K D W+ G + Y + PF WHRK +
Sbjct: 206 ----YGKEVDMWSTGVIMYTLLAGSPPF---------WHRKQM 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
EL G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 162 RRTELCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 216 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
EL G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 162 RRTELCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S EL G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTELCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S EL G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTELCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 96 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 155
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 156 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 203
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 204 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 257
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 258 PPKNCPGPVYRIMTQCWQHQPEDRPN 283
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 96 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 155
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 156 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 203
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 204 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 245
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 166 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 213
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 214 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 269
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 270 MTQCWQHQPEDRPN 283
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 166 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 213
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 214 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 269
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 270 MTQCWQHQPEDRPN 283
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
Length = 362
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I FG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICAFG--YS 164
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
S L Q + G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPK----DTVGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1055 PFY--QSARNTDYEVNALPQLNTNVPEVM------RRLVAKLLENDPSDRPS 1098
PF + +N ++ + + +P+ + R L++++ DP+ R S
Sbjct: 216 PFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+ S E F QL+ GV++ + + HRDLK +N LLD S P+L I FG Y+
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS---PAPRLKICAFG--YS 164
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
S L Q + G A +APEV L + +D W+ G Y +
Sbjct: 165 KSSVLHSQPK----DTVGTPAYIAPEVLLKKE-----YDGKVADVWSCGVTLYVMLVGAY 215
Query: 1576 PF 1577
PF
Sbjct: 216 PF 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 22/187 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ ++ C +L
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKL 532
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1043
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 533 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 579
Query: 1044 TVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS- 1098
+EI H +Q +N D E + N P + L+ K DPS RP
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 639
Query: 1099 AELAATV 1105
EL A +
Sbjct: 640 TELKAQL 646
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+LR++L+ R L + IL QL + +L R HRD+ + N+L+ ++ C +L
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKL 532
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 1564
DFG S + + S + + MAPE +F + S SD W G
Sbjct: 533 --GDFGLSRYMEDSTYYKASKGKLP----IKWMAPES-------INFRRFTSASDVWMFG 579
Query: 1565 TVAYEIFGHDNPFYQSARNTDYWHR 1589
+EI H +Q +N D R
Sbjct: 580 VCMWEILMHGVKPFQGVKNNDVIGR 604
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 270 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLE 325
S SD W G +EI H +Q +N D E + N P + L+ K
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWA 630
Query: 326 NDPSDRPS-AELAATV 340
DPS RP EL A +
Sbjct: 631 YDPSRRPRFTELKAQL 646
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 711 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLE 766
S SD W G +EI H +Q +N D E + N P + L+ K
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWA 630
Query: 767 NDPSDRPS-AELAATV 781
DPS RP EL A +
Sbjct: 631 YDPSRRPRFTELKAQL 646
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 164 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 211
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 212 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPN 291
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 164 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 211
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 212 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 221
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 222 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 277
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 278 MTQCWQHQPEDRPN 291
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 221
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 222 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 277
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 278 MTQCWQHQPEDRPN 291
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMAQDIYRASYYRKGGCAML----------PVKW 212
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMAQDIYRASYYRKGGCAML----------PVKW 212
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 178
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 179 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 226
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 227 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 236
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 237 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 292
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 293 MTQCWQHQPEDRPN 306
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 212
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 212
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 212
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 165 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 212
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 213 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 222
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 223 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 278
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 279 MTQCWQHQPEDRPN 292
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 180
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 181 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 228
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 229 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 282
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 283 PPKNCPGPVYRIMTQCWQHQPEDRPN 308
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 180
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 181 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 228
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 229 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 270
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 191 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 238
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 239 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 294
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 295 MTQCWQHQPEDRPN 308
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 191 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 238
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 239 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 294
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 295 MTQCWQHQPEDRPN 308
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 170
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 171 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 218
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 219 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 272
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 273 PPKNCPGPVYRIMTQCWQHQPEDRPN 298
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 170
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 171 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 218
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 219 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 260
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 181 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 228
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 229 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 284
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 285 MTQCWQHQPEDRPN 298
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 181 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 228
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 229 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 284
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 285 MTQCWQHQPEDRPN 298
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1056 FYQSARNT----------DYEVNALPQLNTNVPEVMRRLVAK 1087
F + D++ Q + + +R+L+ K
Sbjct: 218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1577 F 1577
F
Sbjct: 218 F 218
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 313 PEVMRRLVAK 322
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 754 PEVMRRLVAK 763
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R Y E A +H Q+LE V H++ H HRDLK +N+LL +L
Sbjct: 124 REYYSEADASHCIH-------QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL-- 174
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFG + + + A G ++PEV P Y K D W G +
Sbjct: 175 ADFGLAIEVQGEQQAWFGFA-----GTPGYLSPEVLRKDP-------YGKPVDIWACGVI 222
Query: 1046 AYEIFGHDNPF--------YQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
Y + PF YQ + Y+ + P+ +T PE + L+ ++L +P+ R
Sbjct: 223 LYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS-PEWDTVTPEA-KNLINQMLTINPAKRI 280
Query: 1098 SAELAAT---VCQ 1107
+A+ A VCQ
Sbjct: 281 TADQALKHPWVCQ 293
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 83/227 (36%), Gaps = 61/227 (26%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R Y E A +H Q+LE V H++ H HRDLK +N+LL +L
Sbjct: 124 REYYSEADASHCIH-------QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL-- 174
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFG + + + A G ++PEV P Y K D W G +
Sbjct: 175 ADFGLAIEVQGEQQAWFGFA-----GTPGYLSPEVLRKDP-------YGKPVDIWACGVI 222
Query: 1567 AYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNT 1626
Y + PF+ ++ YQ +
Sbjct: 223 LYILLVGYPPFWDEDQHK----------------------------------LYQQIKAG 248
Query: 1627 DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT---VCQ 1670
Y+ + P+ +T PE + L+ ++L +P+ R +A+ A VCQ
Sbjct: 249 AYDFPS-PEWDTVTPEA-KNLINQMLTINPAKRITADQALKHPWVCQ 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 190
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 191 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 238
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 239 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 292
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 293 PPKNCPGPVYRIMTQCWQHQPEDRPN 318
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 190
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG +SY K G +M V
Sbjct: 191 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRASYYRKGGCAML----------PVKW 238
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 239 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 280
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 248
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 249 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 304
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 305 MTQCWQHQPEDRPN 318
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG +SY K G +M V M PE + G+
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML----------PVKWMPPEAFME--GI 248
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 249 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 304
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 305 MTQCWQHQPEDRPN 318
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1056 FYQSARNT----------DYEVNALPQLNTNVPEVMRRLVAK 1087
F + D++ Q + + +R+L+ K
Sbjct: 218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1577 F 1577
F
Sbjct: 218 F 218
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 313 PEVMRRLVAK 322
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 754 PEVMRRLVAK 763
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 162
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
+L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 163 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 217 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 162
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 37.4 bits (85), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 37.4 bits (85), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
+L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 162 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 216 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 162 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
+L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 167 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 221 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 167 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
+L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 162 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 216 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 162 RRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 948 QLLEGVTHLN-MHRTA--HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
Q +GV +L+ M A HRDLK N+LL L I DFG++ ++ ++
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VLKICDFGTACDIQTHMTNNKG 165
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQ---SA 1060
SA A MAPEV F NYS K D ++ G + +E+ PF + A
Sbjct: 166 SA--------AWMAPEV-------FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
Query: 1061 RNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ V+ P L N+P+ + L+ + DPS RPS E
Sbjct: 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSME 252
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 219 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTA 277
L I DFG++ ++ ++ SA A MAPEV F NYS K D ++
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSA--------AWMAPEV-------FEGSNYSEKCDVFSW 189
Query: 278 GTVAYEIFGHDNPFYQ---SARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRP 332
G + +E+ PF + A + V+ P L N+P+ + L+ + DPS RP
Sbjct: 190 GIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 249
Query: 333 SAE 335
S E
Sbjct: 250 SME 252
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 660 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTA 718
L I DFG++ ++ ++ SA A MAPEV F NYS K D ++
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSA--------AWMAPEV-------FEGSNYSEKCDVFSW 189
Query: 719 GTVAYEIFGHDNPFYQ---SARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRP 773
G + +E+ PF + A + V+ P L N+P+ + L+ + DPS RP
Sbjct: 190 GIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 249
Query: 774 SAE 776
S E
Sbjct: 250 SME 252
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 74/199 (37%), Gaps = 60/199 (30%)
Query: 1469 QLLEGVTHLN-MHRTA--HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
Q +GV +L+ M A HRDLK N+LL L I DFG++ ++ ++
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VLKICDFGTACDIQTHMTNNKG 165
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNT 1584
SA A MAPEV F NYS K D ++ G + +E+ PF
Sbjct: 166 SA--------AWMAPEV-------FEGSNYSEKCDVFSWGIILWEVITRRKPF------- 203
Query: 1585 DYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM 1644
EI G + N P L N+P+ +
Sbjct: 204 -------------------------DEIGGPAFRIMWAVHN-----GTRPPLIKNLPKPI 233
Query: 1645 RRLVAKLLENDPSDRPSAE 1663
L+ + DPS RPS E
Sbjct: 234 ESLMTRCWSKDPSQRPSME 252
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 948 QLLEGVTHLN-MHRTA--HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
Q +GV +L+ M A HRDLK N+LL L I DFG++ ++ ++
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VLKICDFGTACDIQTHMTNNKG 166
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQ---SA 1060
SA A MAPEV F NYS K D ++ G + +E+ PF + A
Sbjct: 167 SA--------AWMAPEV-------FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
Query: 1061 RNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ V+ P L N+P+ + L+ + DPS RPS E
Sbjct: 212 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSME 253
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 219 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTA 277
L I DFG++ ++ ++ SA A MAPEV F NYS K D ++
Sbjct: 146 LKICDFGTACDIQTHMTNNKGSA--------AWMAPEV-------FEGSNYSEKCDVFSW 190
Query: 278 GTVAYEIFGHDNPFYQ---SARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRP 332
G + +E+ PF + A + V+ P L N+P+ + L+ + DPS RP
Sbjct: 191 GIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 250
Query: 333 SAE 335
S E
Sbjct: 251 SME 253
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 660 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTA 718
L I DFG++ ++ ++ SA A MAPEV F NYS K D ++
Sbjct: 146 LKICDFGTACDIQTHMTNNKGSA--------AWMAPEV-------FEGSNYSEKCDVFSW 190
Query: 719 GTVAYEIFGHDNPFYQ---SARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRP 773
G + +E+ PF + A + V+ P L N+P+ + L+ + DPS RP
Sbjct: 191 GIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 250
Query: 774 SAE 776
S E
Sbjct: 251 SME 253
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 74/199 (37%), Gaps = 60/199 (30%)
Query: 1469 QLLEGVTHLN-MHRTA--HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
Q +GV +L+ M A HRDLK N+LL L I DFG++ ++ ++
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VLKICDFGTACDIQTHMTNNKG 166
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNT 1584
SA A MAPEV F NYS K D ++ G + +E+ PF
Sbjct: 167 SA--------AWMAPEV-------FEGSNYSEKCDVFSWGIILWEVITRRKPF------- 204
Query: 1585 DYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM 1644
EI G + N P L N+P+ +
Sbjct: 205 -------------------------DEIGGPAFRIMWAVHN-----GTRPPLIKNLPKPI 234
Query: 1645 RRLVAKLLENDPSDRPSAE 1663
L+ + DPS RPS E
Sbjct: 235 ESLMTRCWSKDPSQRPSME 253
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDN 970
R + IL +L ++L ++ + LS E Q+L+GV +L+ + AH DLK +N
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN 145
Query: 971 ILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLF 1029
I+L ++ P + + DFG ++ + G+ + + G +APE+ P GL
Sbjct: 146 IML-LDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLGL- 197
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVMRR 1083
++D W+ G + Y + +PF + T + + ++ E+ +
Sbjct: 198 ------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 1084 LVAKLLENDPSDRPSAELA 1102
+ KLL + R + + A
Sbjct: 252 FIRKLLVKETRKRLTIQEA 270
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDN 1491
R + IL +L ++L ++ + LS E Q+L+GV +L+ + AH DLK +N
Sbjct: 87 RTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN 145
Query: 1492 ILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLF 1550
I+L ++ P + + DFG ++ + G+ + + G +APE+ P GL
Sbjct: 146 IML-LDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLGL- 197
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
++D W+ G + Y + +PF
Sbjct: 198 ------EADMWSIGVITYILLSGASPF 218
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 316
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 317 RRLVAKLLENDPSDRPSAELA 337
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 757
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 758 RRLVAKLLENDPSDRPSAELA 778
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
+L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 166 RDDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 220 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 166 RDDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1056 FYQSARN------TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
F + T + + ++ E+ + + KLL + R + + A
Sbjct: 218 FLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1577 F 1577
F
Sbjct: 218 F 218
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 316
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 317 RRLVAKLLENDPSDRPSAELA 337
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 757
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 758 RRLVAKLLENDPSDRPSAELA 778
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1056 FYQSARNT----------DYEVNALPQLNTNVPEVMRRLVAK 1087
F + D++ Q + + +R+L+ K
Sbjct: 218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 60/260 (23%)
Query: 1321 IGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSXXXXXXXXXXXXX 1378
IG+ + G A+V + + G+EYA K + + ++ + +
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV--------- 66
Query: 1379 XDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFI 1438
S+ HPN++ +H D + D LI +GG
Sbjct: 67 ------SILRQVLHPNIITLH----DVYENRTDVVLILELV-------SGG--------- 100
Query: 1439 LMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSE 1498
+L ++L ++ LS E Q+L+GV +L+ + AH DLK +NI+L +
Sbjct: 101 -------ELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDK 151
Query: 1499 DNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSK 1557
+ P + + DFG ++ + G+ + + G +APE+ P GL +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLGL-------E 198
Query: 1558 SDAWTAGTVAYEIFGHDNPF 1577
+D W+ G + Y + +PF
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 313 PEVMRRLVAK 322
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 24/130 (18%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------DYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF + D++ Q +
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA 249
Query: 754 PEVMRRLVAK 763
+ +R+L+ K
Sbjct: 250 KDFIRKLLVK 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 163 RTXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 217 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RTXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTXLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTXLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1056 FYQSARN------TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
F + T + + ++ E+ + + KLL + R + + A
Sbjct: 218 FLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS E Q+L+GV +L+ + AH DLK +NI+L ++ P + + DFG ++ +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAHEIE 170
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
G+ + + G +APE+ P GL ++D W+ G + Y + +P
Sbjct: 171 DGVEFK------NIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYILLSGASP 217
Query: 1577 F 1577
F
Sbjct: 218 F 218
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 316
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 317 RRLVAKLLENDPSDRPSAELA 337
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ K+ P + + DFG ++ + G+ + + G +APE+ P G
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK------NIFGTPEFVAPEIVNYEPLG 196
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN------TDYEVNALPQLNTNVPEVM 757
L ++D W+ G + Y + +PF + T + + ++ E+
Sbjct: 197 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA 249
Query: 758 RRLVAKLLENDPSDRPSAELA 778
+ + KLL + R + + A
Sbjct: 250 KDFIRKLLVKETRKRLTIQEA 270
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWS-------CHAPSS 162
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 163 RRTTLSGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 217 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWS-------CHAPSS 162
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RRTTLSGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S SS L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWS-------CHAPSSRRTTLSGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S SS L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWS-------CHAPSSRRTTLSGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMEPEVVTRYYR 192
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ H + D + QL T PE M++
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 252 LQPTVRTYVENRPK 265
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMEPEVVTRYYR 192
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ H + D W++
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNK 236
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ ++ K D W+ G + YE PF + Y+
Sbjct: 166 RXXLCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 220 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ ++ K D W+ G + YE PF
Sbjct: 166 RXXLCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEMIEGR------MHDEKVDLWSL 195
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEMIEGR------MHDEKVDLWSL 195
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 204
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG + Y K G +M V
Sbjct: 205 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRAGYYRKGGCAML----------PVKW 252
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 253 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 307 PPKNCPGPVYRIMTQCWQHQPEDRPN 332
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 204
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG + Y K G +M V
Sbjct: 205 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRAGYYRKGGCAML----------PVKW 252
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 253 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 294
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG + Y K G +M V M PE + G+
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML----------PVKWMPPEAFME--GI 262
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 263 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 318
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 319 MTQCWQHQPEDRPN 332
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG + Y K G +M V M PE + G+
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML----------PVKWMPPEAFME--GI 262
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 263 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 318
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 319 MTQCWQHQPEDRPN 332
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 163 RXXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 217 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RXXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEMIEGR------MHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEMIEGR------MHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 911 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 963
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 181
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1016
RD+ + N LL C + I DFG + Y K G +M V
Sbjct: 182 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRAGYYRKGGCAML----------PVKW 229
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN 1074
M PE + G+F+ SK+D W+ G + +EIF Y S N + V + +++
Sbjct: 230 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 283
Query: 1075 --TNVPEVMRRLVAKLLENDPSDRPS 1098
N P + R++ + ++ P DRP+
Sbjct: 284 PPKNCPGPVYRIMTQCWQHQPEDRPN 309
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 1432 RNMSLFILMK-KYNTDLRNYLRE------RCAQLSMHERILLFTQLLEGVTHLNMHRTAH 1484
+++ FIL++ DL+++LRE + + L+M + + + + G +L + H
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 181
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVAL 1537
RD+ + N LL C + I DFG + Y K G +M V
Sbjct: 182 RDIAARNCLLTCPGPGRVAK--IGDFGMARDIYRAGYYRKGGCAML----------PVKW 229
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
M PE + G+F+ SK+D W+ G + +EIF Y S N +
Sbjct: 230 MPPEAFME--GIFT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 271
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 31/134 (23%)
Query: 215 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 263
TCP I DFG + Y K G +M V M PE + G+
Sbjct: 192 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML----------PVKWMPPEAFME--GI 239
Query: 264 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 319
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 240 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 295
Query: 320 VAKLLENDPSDRPS 333
+ + ++ P DRP+
Sbjct: 296 MTQCWQHQPEDRPN 309
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 31/134 (23%)
Query: 656 TCPQ----LVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 704
TCP I DFG + Y K G +M V M PE + G+
Sbjct: 192 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML----------PVKWMPPEAFME--GI 239
Query: 705 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN--TNVPEVMRRL 760
F+ SK+D W+ G + +EIF Y S N + V + +++ N P + R+
Sbjct: 240 FT----SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI 295
Query: 761 VAKLLENDPSDRPS 774
+ + ++ P DRP+
Sbjct: 296 MTQCWQHQPEDRPN 309
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 163 RAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 217 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 165
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 166 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 219
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 220 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 253
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 165
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 166 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 150 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 196
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 197 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 253
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 150 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 196
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 197 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 253
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 161
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 162 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 216 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 248
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 161
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 162 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 145 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 191
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 192 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 248
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 145 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 191
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 192 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 159
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 160 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 214 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 246
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 159
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 160 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 143 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEMIEGR------MHDEKVDLWSL 189
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 190 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 246
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ ++ K D W+
Sbjct: 143 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEMIEGR------MHDEKVDLWSL 189
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 190 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 246
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G A +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPAFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G A +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPAFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G A +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G A +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 163
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 164 RRXXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 218 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 163
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 164 RRXXLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 148 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEM------IEGRMHDEKVDLWSL 194
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 148 ELKIADFGWSVHAPS-------SRRXXLCGTLDYLPPEM------IEGRMHDEKVDLWSL 194
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 166 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 220 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 165
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 166 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 162 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 216 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 162 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 167 RRXXLXGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 221 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 167 RRXXLXGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRXXLXGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRXXLXGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 167 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 221 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 167 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 164
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 165 RRAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 219 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 164
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 165 RRAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 164
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 165 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 219 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 164
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 165 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 149 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 195
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 167 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 221 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 167 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 197
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 57/237 (24%)
Query: 871 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 930
HPNV+ +H + + I L+ GG +L ++L
Sbjct: 73 HPNVITLHEVYENKTDVILIGELV-----------AGG----------------ELFDFL 105
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++ I DFG
Sbjct: 106 AEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFG 163
Query: 991 SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEI 1049
++ + + + + G +APE+ P GL ++D W+ G + Y +
Sbjct: 164 LAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYIL 210
Query: 1050 FGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
+PF SA N ++E + + +RRL+ K DP R
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DPKKR 263
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 43/187 (22%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HPNV+ +H + + I L+ GG +L ++L
Sbjct: 73 HPNVITLHEVYENKTDVILIGELV-----------AGG----------------ELFDFL 105
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++ I DFG
Sbjct: 106 AEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFG 163
Query: 1512 SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAGTVAYEI 1570
++ + + + + G +APE+ P GL ++D W+ G + Y +
Sbjct: 164 LAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIGVITYIL 210
Query: 1571 FGHDNPF 1577
+PF
Sbjct: 211 LSGASPF 217
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 187
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
+L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 188 RRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 187
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 188 RRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 172 ELKIADFGWSVHAPS-------SRRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 218
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S +L G + + PE+ + ++ K D W+
Sbjct: 172 ELKIADFGWSVHAPS-------SRRDDLCGTLDYLPPEM------IEGRMHDEKVDLWSL 218
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTHFEASKKMK-- 192
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
+ G +APEV T K D W+ G + Y + PF + +
Sbjct: 193 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPFNGA---NE 238
Query: 1065 YEV----------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
Y++ LPQ V E + L+ K+L PS R SA A
Sbjct: 239 YDILKKVEKGKYTFELPQWK-KVSESAKDLIRKMLTYVPSMRISARDA 285
Score = 47.0 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLSTHFEASKKMK-- 192
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T K D W+ G + Y + PF
Sbjct: 193 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPF 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 911 RNMSLF-ILMKKYNTDLRNYLRERCAQLSMHERI------LLFTQLLEGVTHLNMHRTAH 963
N F ++M+K+ + L + A + H R+ +F QL+ V +L + H
Sbjct: 99 ENQGFFQLVMEKHGSGLDLF-----AFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIH 153
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFGS-SYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
RD+K +NI++ +ED T + + DFGS +Y + L + G + APEV
Sbjct: 154 RDIKDENIVI--AEDFT---IKLIDFGSAAYLERGKLFYTFC-------GTIEYCAPEVL 201
Query: 1023 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMR 1082
+ P + + W+ G Y + +NPF + + ++ P L V + +
Sbjct: 202 MGNP-----YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHP-PYL---VSKELM 252
Query: 1083 RLVAKLLENDPSDRPSAELAAT 1104
LV+ LL+ P R + E T
Sbjct: 253 SLVSGLLQPVPERRTTLEKLVT 274
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 1432 RNMSLF-ILMKKYNTDLRNYLRERCAQLSMHERI------LLFTQLLEGVTHLNMHRTAH 1484
N F ++M+K+ + L + A + H R+ +F QL+ V +L + H
Sbjct: 99 ENQGFFQLVMEKHGSGLDLF-----AFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIH 153
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFGS-SYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
RD+K +NI++ +ED T + + DFGS +Y + L + G + APEV
Sbjct: 154 RDIKDENIVI--AEDFT---IKLIDFGSAAYLERGKLFYTFC-------GTIEYCAPEVL 201
Query: 1544 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
+ P + + W+ G Y + +NPF +
Sbjct: 202 MGNP-----YRGPELEMWSLGVTLYTLVFEENPFCE 232
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 202 SIPDSSLIYPKDNTCPQLVITDFGSS-YTNKSGLSMQYSSADIELGGNVALMAPEVALAT 260
I D +++ +D T + + DFGS+ Y + L + G + APEV +
Sbjct: 155 DIKDENIVIAEDFT---IKLIDFGSAAYLERGKLFYTFC-------GTIEYCAPEVLMGN 204
Query: 261 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLV 320
P + + W+ G Y + +NPF + + ++ P L V + + LV
Sbjct: 205 P-----YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHP-PYL---VSKELMSLV 255
Query: 321 AKLLENDPSDRPSAELAAT 339
+ LL+ P R + E T
Sbjct: 256 SGLLQPVPERRTTLEKLVT 274
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 643 SIPDSSLIYPKDNTCPQLVITDFGSS-YTNKSGLSMQYSSADIELGGNVALMAPEVALAT 701
I D +++ +D T + + DFGS+ Y + L + G + APEV +
Sbjct: 155 DIKDENIVIAEDFT---IKLIDFGSAAYLERGKLFYTFC-------GTIEYCAPEVLMGN 204
Query: 702 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLV 761
P + + W+ G Y + +NPF + + ++ P L V + + LV
Sbjct: 205 P-----YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHP-PYL---VSKELMSLV 255
Query: 762 AKLLENDPSDRPSAELAAT 780
+ LL+ P R + E T
Sbjct: 256 SGLLQPVPERRTTLEKLVT 274
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 187
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 188 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 242 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 187
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 188 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 172 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 218
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 172 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 218
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
N +L +N ++ YL+ R S +E Q++ G+ +L+ H HRDL N+
Sbjct: 84 NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNL 143
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFS 1030
LL + + + I DFG + K Y+ L G ++PE+A + GL
Sbjct: 144 LLTRNMN-----IKIADFGLATQLKMPHEKHYT-----LCGTPNYISPEIATRSAHGL-- 191
Query: 1031 FVNYSKSDAWTAGTVAYEIFGHDNPF-YQSARNT-------DYEVNALPQLNTNVPEVMR 1082
+SD W+ G + Y + PF + +NT DYE+ + + +
Sbjct: 192 -----ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA------K 240
Query: 1083 RLVAKLLENDPSDRPS 1098
L+ +LL +P+DR S
Sbjct: 241 DLIHQLLRRNPADRLS 256
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 65/261 (24%)
Query: 1320 QIGKFIAKGTNAVVY--EATFRGVEYALKMMFNYSAASNSHAILKAMSXXXXXXXXXXXX 1377
++G + KG+ A VY E+ G+E A+KM+ + A+ KA
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-------DKKAMYKAGMVQRVQNEV---- 62
Query: 1378 XXDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLF 1437
+ HP+++ ++ F DS+ +Y
Sbjct: 63 -------KIHCQLKHPSILELYNYF-------EDSNYVY--------------------L 88
Query: 1438 ILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCS 1497
+L +N ++ YL+ R S +E Q++ G+ +L+ H HRDL N+LL +
Sbjct: 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN 148
Query: 1498 EDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYS 1556
+ + I DFG + K Y+ L G ++PE+A + GL
Sbjct: 149 MN-----IKIADFGLATQLKMPHEKHYT-----LCGTPNYISPEIATRSAHGL------- 191
Query: 1557 KSDAWTAGTVAYEIFGHDNPF 1577
+SD W+ G + Y + PF
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPF 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 99 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 156
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 157 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 203
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 204 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 259
Query: 1094 SDR 1096
R
Sbjct: 260 KKR 262
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 99 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 156
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 157 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 203
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 204 VITYILLSGASPF 216
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 195 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 248 KDFIRRLLVK----DPKKR 262
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 195 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 248 KDFIRRLLVK----DPKKR 262
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLV--GENQV---IK 143
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 144 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ + P DRP+
Sbjct: 193 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 250
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLV--GENQV---IK 143
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 144 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 193 LMWEVFSEGKIPYENRSNSE 212
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ + P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPA 250
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ + P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPA 250
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 178
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 179 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 232
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 233 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 266
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 178
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 179 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 163 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 209
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 210 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 266
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 163 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSL 209
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 210 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 266
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 99 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 156
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 157 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 203
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 204 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 259
Query: 1094 SDR 1096
R
Sbjct: 260 KKR 262
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 99 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 156
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 157 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 203
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 204 VITYILLSGASPF 216
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 195 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 248 KDFIRRLLVK----DPKKR 262
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 195 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 248 KDFIRRLLVK----DPKKR 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S S S
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPS------SR 163
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
D L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 164 RDT-LCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 217 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S S S
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPS------SR 163
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
D L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 164 RDT-LCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S D L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWSVHAPS------SRRDT-LCGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S D L G + + PE+ + ++ K D W+
Sbjct: 147 ELKIADFGWSVHAPS------SRRDT-LCGTLDYLPPEM------IEGRMHDEKVDLWSL 193
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPEVVTRYYR 192
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ + + D + QL T PE M++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 252 LQPTVRTYVENRPK 265
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPEVVTRYYR 192
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ + + D W++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNK 236
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 47/242 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
SL ++ + + DL+ YL + ++MH L QLL G+ + + + HRDLK N+L+
Sbjct: 74 SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI 133
Query: 1495 DCSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
N +L + DFG +Y N+ +++ Y DI LG
Sbjct: 134 -----NERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGS------------ 175
Query: 1546 TPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTT 1604
+YS + D W G + YE+ P + + + H ++++ L T
Sbjct: 176 -------TDYSTQIDMWGVGCIFYEM-ATGRPLFPGSTVEEQLH--FIFRILGTPTEETW 225
Query: 1605 PSTVAYEIFGHDN-PFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P ++ E F N P Y++ + ++ P+L+++ + L+ KLL+ + +R SAE
Sbjct: 226 PGILSNEEFKTYNYPKYRA----EALLSHAPRLDSDGAD----LLTKLLQFEGRNRISAE 277
Query: 1664 LA 1665
A
Sbjct: 278 DA 279
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
SL ++ + + DL+ YL + ++MH L QLL G+ + + + HRDLK N+L+
Sbjct: 74 SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI 133
Query: 974 DCSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
N +L + DFG +Y N+ +++ Y DI LG
Sbjct: 134 -----NERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGS------------ 175
Query: 1025 TPGLFSFVNYS-KSDAWTAGTVAYEI 1049
+YS + D W G + YE+
Sbjct: 176 -------TDYSTQIDMWGVGCIFYEM 194
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 28/172 (16%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V H +++ HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF--------YQ 1058
G ++PEV P Y K D W G + Y + PF YQ
Sbjct: 168 ----GTPGYLSPEVLRKDP-------YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQ 216
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT---VCQ 1107
+ Y+ + P+ +T PE + L+ K+L +P+ R +A A +CQ
Sbjct: 217 QIKAGAYDFPS-PEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQ 266
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 77/206 (37%), Gaps = 54/206 (26%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V H +++ HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
G ++PEV P Y K D W G + Y + PF+ +
Sbjct: 168 ----GTPGYLSPEVLRKDP-------YGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
HR YQ + Y+ + P+ +T PE + L
Sbjct: 212 HR-----------------------------LYQQIKAGAYDFPS-PEWDTVTPEA-KDL 240
Query: 1648 VAKLLENDPSDRPSAELAAT---VCQ 1670
+ K+L +P+ R +A A +CQ
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQ 266
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 950 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADI 1008
L+G+ +L+ H HRD+K+ NILL + P LV + DFGS+ M ++ +
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILL------SEPGLVKLGDFGSASI------MAPANXFV 172
Query: 1009 ELGGNVALMAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYE 1066
G MAPEV LA G + K D W+ G E+ P F +A + Y
Sbjct: 173 ---GTPYWMAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYH 225
Query: 1067 V--NALPQLNT-NVPEVMRRLVAKLLENDPSDRPSAEL 1101
+ N P L + + E R V L+ P DRP++E+
Sbjct: 226 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 263
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 59/196 (30%)
Query: 1471 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADI 1529
L+G+ +L+ H HRD+K+ NILL + P LV + DFGS+ M ++ +
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILL------SEPGLVKLGDFGSASI------MAPANXFV 172
Query: 1530 ELGGNVALMAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWH 1588
G MAPEV LA G + K D W+ G E+ P +
Sbjct: 173 ---GTPYWMAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLF---------- 215
Query: 1589 RKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLV 1648
+ + Y I +++P QS ++Y R V
Sbjct: 216 -------------NMNAMSALYHIAQNESPALQSGHWSEY---------------FRNFV 247
Query: 1649 AKLLENDPSDRPSAEL 1664
L+ P DRP++E+
Sbjct: 248 DSCLQKIPQDRPTSEV 263
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 252 MAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYEV--NALPQ 307
MAPEV LA G + K D W+ G E+ P F +A + Y + N P
Sbjct: 178 MAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233
Query: 308 LNT-NVPEVMRRLVAKLLENDPSDRPSAEL 336
L + + E R V L+ P DRP++E+
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 263
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 693 MAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYEV--NALPQ 748
MAPEV LA G + K D W+ G E+ P F +A + Y + N P
Sbjct: 178 MAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233
Query: 749 LNT-NVPEVMRRLVAKLLENDPSDRPSAEL 777
L + + E R V L+ P DRP++E+
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 950 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADI 1008
L+G+ +L+ H HRD+K+ NILL + P LV + DFGS+ M ++ +
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILL------SEPGLVKLGDFGSASI------MAPANXFV 211
Query: 1009 ELGGNVALMAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYE 1066
G MAPEV LA G + K D W+ G E+ P F +A + Y
Sbjct: 212 ---GTPYWMAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYH 264
Query: 1067 V--NALPQLNT-NVPEVMRRLVAKLLENDPSDRPSAEL 1101
+ N P L + + E R V L+ P DRP++E+
Sbjct: 265 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 302
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 59/196 (30%)
Query: 1471 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADI 1529
L+G+ +L+ H HRD+K+ NILL + P LV + DFGS+ M ++ +
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILL------SEPGLVKLGDFGSASI------MAPANXFV 211
Query: 1530 ELGGNVALMAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWH 1588
G MAPEV LA G + K D W+ G E+ P +
Sbjct: 212 ---GTPYWMAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLF---------- 254
Query: 1589 RKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLV 1648
+ + Y I +++P QS ++Y R V
Sbjct: 255 -------------NMNAMSALYHIAQNESPALQSGHWSEY---------------FRNFV 286
Query: 1649 AKLLENDPSDRPSAEL 1664
L+ P DRP++E+
Sbjct: 287 DSCLQKIPQDRPTSEV 302
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 252 MAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYEV--NALPQ 307
MAPEV LA G + K D W+ G E+ P F +A + Y + N P
Sbjct: 217 MAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 272
Query: 308 LNT-NVPEVMRRLVAKLLENDPSDRPSAEL 336
L + + E R V L+ P DRP++E+
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 302
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 693 MAPEVALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP-FYQSARNTDYEV--NALPQ 748
MAPEV LA G + K D W+ G E+ P F +A + Y + N P
Sbjct: 217 MAPEVILAMDEGQYD----GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 272
Query: 749 LNT-NVPEVMRRLVAKLLENDPSDRPSAEL 777
L + + E R V L+ P DRP++E+
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEV 302
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 143
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 144 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ + P DRP+
Sbjct: 193 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 250
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 143
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 144 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 193 LMWEVFSEGKIPYENRSNSE 212
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ + P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPA 250
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ + P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPA 250
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 87 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 141
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 142 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 190
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ + P DRP+
Sbjct: 191 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 248
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 87 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 141
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 142 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 190
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 191 LMWEVFSEGKIPYENRSNSE 210
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ + P DRP+
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPA 248
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ + P DRP+
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPA 248
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS E++ + Q+ G+ +L+ + HRDL + N L+ +N + I DFG S +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMV--VKIADFGLS---R 222
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD-NP 1055
+ S Y AD + M PE +F ++SD W G V +EIF + P
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPE------SIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
Query: 1056 FYQSARNT------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+Y A D + A P+ N P + L+ P+DRPS
Sbjct: 277 YYGMAHEEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPS 322
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS E++ + Q+ G+ +L+ + HRDL + N L+ +N + I DFG S +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMV--VKIADFGLS---R 222
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD-NP 1576
+ S Y AD + M PE +F ++SD W G V +EIF + P
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPE------SIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
Query: 1577 FYQSA 1581
+Y A
Sbjct: 277 YYGMA 281
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 221 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 280
I DFG S ++ S Y AD + M PE +F ++SD W G V
Sbjct: 215 IADFGLS---RNIYSADYYKADGNDAIPIRWMPPE------SIFYNRYTTESDVWAYGVV 265
Query: 281 AYEIFGHD-NPFYQSARNT------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 333
+EIF + P+Y A D + A P+ N P + L+ P+DRPS
Sbjct: 266 LWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPS 322
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 662 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 721
I DFG S ++ S Y AD + M PE +F ++SD W G V
Sbjct: 215 IADFGLS---RNIYSADYYKADGNDAIPIRWMPPE------SIFYNRYTTESDVWAYGVV 265
Query: 722 AYEIFGHD-NPFYQSARNT------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 774
+EIF + P+Y A D + A P+ N P + L+ P+DRPS
Sbjct: 266 LWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPS 322
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 109 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 163
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 164 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 212
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ + P DRP+
Sbjct: 213 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 270
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 109 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 163
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 164 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 212
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 213 LMWEVFSEGKIPYENRSNSE 232
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ + P DRP+
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPA 270
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ + P DRP+
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPA 270
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 92 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 146
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 147 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 195
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ P DRP+
Sbjct: 196 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 253
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 92 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 146
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 147 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 195
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 196 LMWEVFSEGKIPYENRSNSE 215
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ P DRP+
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPA 253
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ P DRP+
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPA 253
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + + HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF + Y+
Sbjct: 163 RAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + V E R L+++LL+++PS RP
Sbjct: 217 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + + HRD+K +N+LL + +L I DFG S SS
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SSR 162
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 163 RAALCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE+ + ++ K D W+
Sbjct: 146 ELKIADFGWSVHAPS-------SRRAALCGTLDYLPPEM------IEGRMHDEKVDLWSL 192
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 193 GVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ + L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE + + K D W+ G + YE PF + Y
Sbjct: 167 RRTTLCGTLDYLPPEX------IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 221 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAP-------SS 166
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE + + K D W+ G + YE PF
Sbjct: 167 RRTTLCGTLDYLPPEX------IEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 277
+L I DFG S S S L G + + PE + + K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEX------IEGRXHDEKVDLWSL 197
Query: 278 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 718
+L I DFG S S S L G + + PE + + K D W+
Sbjct: 151 ELKIADFGWSVHAPS-------SRRTTLCGTLDYLPPEX------IEGRXHDEKVDLWSL 197
Query: 719 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
G + YE PF + Y+ + + V E R L+++LL+++PS RP
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 90 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 144
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1044
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 145 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 193
Query: 1045 VAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL----ENDPSDRPS 1098
+ +E+F Y++ N++ + P + V +++ P DRP+
Sbjct: 194 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 251
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +YLR + + + + + EG+ +L HRDL + N L+ E+ +
Sbjct: 90 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQV---IK 144
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGT 1565
++DFG + L QY+S+ P V A+P +FSF YS KSD W+ G
Sbjct: 145 VSDFG---MTRFVLDDQYTSS-------TGTKFP-VKWASPEVFSFSRYSSKSDVWSFGV 193
Query: 1566 VAYEIFGHDNPFYQSARNTD 1585
+ +E+F Y++ N++
Sbjct: 194 LMWEVFSEGKIPYENRSNSE 213
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 256 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 314
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Query: 315 VMRRLVAKLL----ENDPSDRPS 333
+ V +++ P DRP+
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPA 251
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 697 VALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 755
V A+P +FSF YS KSD W+ G + +E+F Y++ N++ + P
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
Query: 756 VMRRLVAKLL----ENDPSDRPS 774
+ V +++ P DRP+
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPA 251
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L ++L E+ L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1043
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1044 TVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
+ Y + +PF SA N ++E + + +RRL+ K DP
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK----DP 260
Query: 1094 SDR 1096
R
Sbjct: 261 KKR 263
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L ++L E+ L+ E Q+L GV +L+ + AH DLK +NI+L + P++
Sbjct: 100 ELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRI 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-GLFSFVNYSKSDAWTAG 1564
I DFG ++ + + + + G +APE+ P GL ++D W+ G
Sbjct: 158 KIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGL-------EADMWSIG 204
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 205 VITYILLSGASPF 217
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 204 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 262
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 263 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 312
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 313 PEVMRRLVAKLLENDPSDR 331
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 645 PDSSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP-G 703
P++ ++ ++ P++ I DFG ++ + + + + G +APE+ P G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAH------KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 704 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ----------SARNTDYEVNALPQLNTNV 753
L ++D W+ G + Y + +PF SA N ++E +
Sbjct: 196 L-------EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 754 PEVMRRLVAKLLENDPSDR 772
+ +RRL+ K DP R
Sbjct: 249 KDFIRRLLVK----DPKKR 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 952 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1011
+ +L+ +RDLK +NILLD + + ITDFG + L
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNG-----HIKITDFG--------FAKYVPDVTYXLC 164
Query: 1012 GNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VN 1068
G +APEV P Y+KS D W+ G + YE+ PFY S YE +N
Sbjct: 165 GTPDYIAPEVVSTKP-------YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
Query: 1069 AL----PQLNTNVPEVMRRLVAKLL 1089
A P N +V +++ RL+ + L
Sbjct: 218 AELRFPPFFNEDVKDLLSRLITRDL 242
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 1473 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1532
+ +L+ +RDLK +NILLD + + ITDFG + L
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNG-----HIKITDFG--------FAKYVPDVTYXLC 164
Query: 1533 GNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS 1580
G +APEV P Y+KS D W+ G + YE+ PFY S
Sbjct: 165 GTPDYIAPEVVSTKP-------YNKSIDWWSFGILIYEMLAGYTPFYDS 206
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 218 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWT 276
+ ITDFG + L G +APEV P Y+KS D W+
Sbjct: 144 HIKITDFG--------FAKYVPDVTYXLCGTPDYIAPEVVSTKP-------YNKSIDWWS 188
Query: 277 AGTVAYEIFGHDNPFYQSARNTDYE--VNAL----PQLNTNVPEVMRRLVAKLL 324
G + YE+ PFY S YE +NA P N +V +++ RL+ + L
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDL 242
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 659 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWT 717
+ ITDFG + L G +APEV P Y+KS D W+
Sbjct: 144 HIKITDFG--------FAKYVPDVTYXLCGTPDYIAPEVVSTKP-------YNKSIDWWS 188
Query: 718 AGTVAYEIFGHDNPFYQSARNTDYE--VNAL----PQLNTNVPEVMRRLVAKLL 765
G + YE+ PFY S YE +NA P N +V +++ RL+ + L
Sbjct: 189 FGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDL 242
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMEPEVVTRYYR 192
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ H + D + QL T P M++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCH-KILFPGRDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 252 LQPTVRNYVENRPK 265
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M PEV
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMEPEVVTRYYR 192
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ H + D W++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCH-KILFPGRDYIDQWNK 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 28/172 (16%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V H +++ HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF--------YQ 1058
G ++PEV P Y K D W G + Y + PF YQ
Sbjct: 168 ----GTPGYLSPEVLRKDP-------YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQ 216
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT---VCQ 1107
+ Y+ + P+ +T PE + L+ K+L +P+ R +A A +CQ
Sbjct: 217 QIKAGAYDFPS-PEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQ 266
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 77/206 (37%), Gaps = 54/206 (26%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V H +++ HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
G ++PEV P Y K D W G + Y + PF+ +
Sbjct: 168 ----GTPGYLSPEVLRKDP-------YGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
HR YQ + Y+ + P+ +T PE + L
Sbjct: 212 HR-----------------------------LYQQIKAGAYDFPS-PEWDTVTPEA-KDL 240
Query: 1648 VAKLLENDPSDRPSAELAAT---VCQ 1670
+ K+L +P+ R +A A +CQ
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQ 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I +FG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAP-------SS 164
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 165 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 219 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I +FG S SS
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAP-------SS 164
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 165 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 239 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 298
SS L G + + PE+ + ++ K D W+ G + YE PF +
Sbjct: 163 SSRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 299 DYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
Y+ + + V E R L+++LL+++PS RP
Sbjct: 217 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 680 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 739
SS L G + + PE+ + ++ K D W+ G + YE PF +
Sbjct: 163 SSRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 740 DYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
Y+ + + V E R L+++LL+++PS RP
Sbjct: 217 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 947 TQLLEGVTHLNMHRTA---HRDLKSDNILLDCSEDN---TCPQLVITDFGSSYTNKSGLS 1000
Q+ G+ +L+ HRDLKS NIL+ +N + L ITDFG +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE------ 165
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + + G A MAPEV A+ +FS SD W+ G + +E+ + PF
Sbjct: 166 -WHRTTKMSAAGAYAWMAPEVIRAS--MFS----KGSDVWSYGVLLWELLTGEVPF---- 214
Query: 1061 RNTD-----YEVNALPQLNTNVPEVMRRLVAKLLEN----DPSDRPS 1098
R D Y V A+ +L +P AKL+E+ DP RPS
Sbjct: 215 RGIDGLAVAYGV-AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPS 260
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 1468 TQLLEGVTHLNMHRTA---HRDLKSDNILLDCSEDN---TCPQLVITDFGSSYTNKSGLS 1521
Q+ G+ +L+ HRDLKS NIL+ +N + L ITDFG +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE------ 165
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ + + G A MAPEV A+ +FS SD W+ G + +E+ + PF
Sbjct: 166 -WHRTTKMSAAGAYAWMAPEVIRAS--MFS----KGSDVWSYGVLLWELLTGEVPF 214
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 219 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 278
L ITDFG + + + + G A MAPEV A+ +FS SD W+ G
Sbjct: 155 LKITDFGLARE-------WHRTTKMSAAGAYAWMAPEVIRAS--MFS----KGSDVWSYG 201
Query: 279 TVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPEVMRRLVAKLLEN----DPS 329
+ +E+ + PF R D Y V A+ +L +P AKL+E+ DP
Sbjct: 202 VLLWELLTGEVPF----RGIDGLAVAYGV-AMNKLALPIPSTCPEPFAKLMEDCWNPDPH 256
Query: 330 DRPS 333
RPS
Sbjct: 257 SRPS 260
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 660 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 719
L ITDFG + + + + G A MAPEV A+ +FS SD W+ G
Sbjct: 155 LKITDFGLARE-------WHRTTKMSAAGAYAWMAPEVIRAS--MFS----KGSDVWSYG 201
Query: 720 TVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPEVMRRLVAKLLEN----DPS 770
+ +E+ + PF R D Y V A+ +L +P AKL+E+ DP
Sbjct: 202 VLLWELLTGEVPF----RGIDGLAVAYGV-AMNKLALPIPSTCPEPFAKLMEDCWNPDPH 256
Query: 771 DRPS 774
RPS
Sbjct: 257 SRPS 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
T+L +++ + R HRD+K +N+LL + +L I +FG S SS
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAP-------SS 163
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
L G + + PE+ + ++ K D W+ G + YE PF + Y
Sbjct: 164 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 1066 EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 1097
+ + + V E R L+++LL+++PS RP
Sbjct: 218 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
T+L +++ + R HRD+K +N+LL + +L I +FG S SS
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAP-------SS 163
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 164 RRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 239 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 298
SS L G + + PE+ + ++ K D W+ G + YE PF +
Sbjct: 162 SSRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 299 DYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 332
Y+ + + V E R L+++LL+++PS RP
Sbjct: 216 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 680 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 739
SS L G + + PE+ + ++ K D W+ G + YE PF +
Sbjct: 162 SSRRTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 740 DYEVNALPQLN--TNVPEVMRRLVAKLLENDPSDRP 773
Y+ + + V E R L+++LL+++PS RP
Sbjct: 216 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 906 TGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRD 965
+ G+ + SL + ++ ++D + +E ++M + I Q+ G+ L+ + HRD
Sbjct: 170 SSGFQEDKSLSDVEEEEDSD--GFYKE---PITMEDLISYSFQVARGMEFLSSRKCIHRD 224
Query: 966 LKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL----MAPEV 1021
L + NILL SE+N + I DFG + Y + D G+ L MAPE
Sbjct: 225 LAARNILL--SENNV---VKICDFGLARD-------IYKNPDYVRKGDTRLPLKWMAPE- 271
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYEVNALPQLNTNVPEV 1080
+F + +KSD W+ G + +EIF +P+ + D+ + PE
Sbjct: 272 -----SIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEY 326
Query: 1081 ----MRRLVAKLLENDPSDRPS-AELAATVCQL 1108
+ +++ DP +RP AEL + L
Sbjct: 327 STPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 28/168 (16%)
Query: 1427 TGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRD 1486
+ G+ + SL + ++ ++D + +E ++M + I Q+ G+ L+ + HRD
Sbjct: 170 SSGFQEDKSLSDVEEEEDSD--GFYKE---PITMEDLISYSFQVARGMEFLSSRKCIHRD 224
Query: 1487 LKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL----MAPEV 1542
L + NILL SE+N + I DFG + Y + D G+ L MAPE
Sbjct: 225 LAARNILL--SENNV---VKICDFGLARD-------IYKNPDYVRKGDTRLPLKWMAPE- 271
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYWHR 1589
+F + +KSD W+ G + +EIF +P+ + D+ R
Sbjct: 272 -----SIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR 314
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+LF +M+ N Y + C + + +++ G+ L+ +RDLK DNILL
Sbjct: 93 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D +D + I DFG N G + E G +APE+ L
Sbjct: 153 D--KDG---HIKIADFGMCKENMLG-----DAKTNEFCGTPDYIAPEILLGQ-------K 195
Query: 1555 YSKS-DAWTAGTVAYEIFGHDNPF--------YQSARNTDYWHRKWL 1592
Y+ S D W+ G + YE+ +PF + S R + ++ +WL
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 242
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 24/188 (12%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+LF +M+ N Y + C + + +++ G+ L+ +RDLK DNILL
Sbjct: 93 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D +D + I DFG N G + E G +APE+ L
Sbjct: 153 D--KDG---HIKIADFGMCKENMLG-----DAKTNEFCGTPDYIAPEILLGQ-------K 195
Query: 1034 YSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR----LVAKL 1088
Y+ S D W+ G + YE+ +PF+ ++ + +++ N P + + L+ KL
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFH--GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 253
Query: 1089 LENDPSDR 1096
+P R
Sbjct: 254 FVREPEKR 261
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 37/174 (21%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 162
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 163 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H + D + QL T PE M++L V +EN P
Sbjct: 207 CIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 162
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 163 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 207 CIMGEMVRH 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 105 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 157
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
NI++ DC+ L I DFG + T + M + APEV L
Sbjct: 158 NIVVKSDCT-------LKILDFGLARTAGTSFMM------VPFVVTRYYRAPEVILG--- 201
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL-- 1084
+ Y ++ D W+ G + E+ + + D + QL T PE M++L
Sbjct: 202 ----MGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 256
Query: 1085 -VAKLLENDPS 1094
V +EN P
Sbjct: 257 TVRTYVENRPK 267
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 35/162 (21%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 105 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 157
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
NI++ DC+ L I DFG + T + M + APEV L
Sbjct: 158 NIVVKSDCT-------LKILDFGLARTAGTSFMM------VPFVVTRYYRAPEVILG--- 201
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
+ Y ++ D W+ G + E+ + + D W++
Sbjct: 202 ----MGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNK 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 37/174 (21%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 161
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 162 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H + D + QL T PE M++L V +EN P
Sbjct: 206 CIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 161
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 162 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 206 CIMGEMVRH 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 73/175 (41%), Gaps = 39/175 (22%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 168
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 169 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 1044 TVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H F R+ D + QL T PE M++L V +EN P
Sbjct: 213 CIMGEMVRHKILF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 168
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 169 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 213 CIMGEMVRH 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 37/174 (21%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 162
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 163 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H + D + QL T PE M++L V +EN P
Sbjct: 207 CIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 162
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 163 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 207 CIMGEMVRH 215
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 108 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 160
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M P V
Sbjct: 161 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 197
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ H + D + QL T PE M++
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 257 LQPTVRTYVENRPK 270
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 108 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 160
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M P V
Sbjct: 161 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 197
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ H + D W++
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNK 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 73/175 (41%), Gaps = 39/175 (22%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 169
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 170 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 1044 TVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H F R+ D + QL T PE M++L V +EN P
Sbjct: 214 CIMGEMVRHKILF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 169
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 170 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 214 CIMGEMVRH 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 73/175 (41%), Gaps = 39/175 (22%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 169
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 170 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 1044 TVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H F R+ D + QL T PE M++L V +EN P
Sbjct: 214 CIMGEMVRHKILF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 169
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 170 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 214 CIMGEMVRH 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 37/174 (21%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 115 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 167
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 168 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H + D + QL T PE M++L V +EN P
Sbjct: 212 CIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 264
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 115 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 167
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 168 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 212 CIMGEMVRH 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 73/175 (41%), Gaps = 39/175 (22%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 168
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 169 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 1044 TVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H F R+ D + QL T PE M++L V +EN P
Sbjct: 213 CIMGEMVRHKILF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 168
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 169 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 213 CIMGEMVRH 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 97 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 149
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M P V
Sbjct: 150 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 186
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ H + D + QL T PE M++
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 246 LQPTVRTYVENRPK 259
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 97 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 149
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M P V
Sbjct: 150 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 186
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ H + D W++
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCH-KILFPGRDYIDQWNK 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 37/174 (21%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 987
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 206
Query: 988 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1043
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 207 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ E+ H + D + QL T PE M++L V +EN P
Sbjct: 251 CIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVIT 1508
C + M HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKIL 206
Query: 1509 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAG 1564
DFG + T G +M P V P + + Y ++ D W+ G
Sbjct: 207 DFGLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 1565 TVAYEIFGH 1573
+ E+ H
Sbjct: 251 CIMGEMVRH 259
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG--SSYTNKSGLS 1000
IL Q+ EG+ H++ H DLK +NIL C + Q+ I DFG Y + L
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENIL--CV-NRDAKQIKIIDFGLARRYKPREKLK 246
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G +APEV + FV++ +D W+ G +AY + +PF
Sbjct: 247 VNF--------GTPEFLAPEVV-----NYDFVSFP-TDMWSVGVIAYMLLSGLSPFL--G 290
Query: 1061 RNTDYEVNAL--------PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWA 1112
N +N + + ++ E + ++KLL + S R SA A + W
Sbjct: 291 DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK----HPWL 346
Query: 1113 PKHWLY 1118
H L+
Sbjct: 347 SDHKLH 352
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG--SSYTNKSGLS 1521
IL Q+ EG+ H++ H DLK +NIL C + Q+ I DFG Y + L
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENIL--CV-NRDAKQIKIIDFGLARRYKPREKLK 246
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ + G +APEV + FV++ +D W+ G +AY + +PF
Sbjct: 247 VNF--------GTPEFLAPEVV-----NYDFVSFP-TDMWSVGVIAYMLLSGLSPF 288
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 32/177 (18%)
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
RER + HE + +++ + HL+ +RD+K +NILLD + +V+TDF
Sbjct: 153 RERFTE---HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN-----GHVVLTDF- 203
Query: 991 SSYTNKSGLSMQYSSADIE----LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
GLS ++ + + E G + MAP++ + K+ D W+ G +
Sbjct: 204 -------GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS-----GHDKAVDWWSLGVL 251
Query: 1046 AYEIFGHDNPF-YQSARNTDYEVN-----ALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
YE+ +PF +N+ E++ + P + + + L+ +LL DP R
Sbjct: 252 MYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
RER + HE + +++ + HL+ +RD+K +NILLD + +V+TDF
Sbjct: 153 RERFTE---HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN-----GHVVLTDF- 203
Query: 1512 SSYTNKSGLSMQYSSADIE----LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
GLS ++ + + E G + MAP++ + K+ D W+ G +
Sbjct: 204 -------GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS-----GHDKAVDWWSLGVL 251
Query: 1567 AYEIFGHDNPF 1577
YE+ +PF
Sbjct: 252 MYELLTGASPF 262
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 214 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELG----GNVALMAPEVALATPGLFSFVNY 269
++ +V+TDFG LS ++ + + E G + MAP++ +
Sbjct: 193 DSNGHVVLTDFG--------LSKEFVADETERAYDFCGTIEYMAPDIVRGGDS-----GH 239
Query: 270 SKS-DAWTAGTVAYEIFGHDNPF-YQSARNTDYEVN-----ALPQLNTNVPEVMRRLVAK 322
K+ D W+ G + YE+ +PF +N+ E++ + P + + + L+ +
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR 299
Query: 323 LLENDPSDR 331
LL DP R
Sbjct: 300 LLMKDPKKR 308
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 655 NTCPQLVITDFGSSYTNKSGLSMQYSSADIELG----GNVALMAPEVALATPGLFSFVNY 710
++ +V+TDFG LS ++ + + E G + MAP++ +
Sbjct: 193 DSNGHVVLTDFG--------LSKEFVADETERAYDFCGTIEYMAPDIVRGGDS-----GH 239
Query: 711 SKS-DAWTAGTVAYEIFGHDNPF-YQSARNTDYEVN-----ALPQLNTNVPEVMRRLVAK 763
K+ D W+ G + YE+ +PF +N+ E++ + P + + + L+ +
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR 299
Query: 764 LLENDPSDR 772
LL DP R
Sbjct: 300 LLMKDPKKR 308
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLR L + + + + EG+ L H+ HRDL + N L+D + C
Sbjct: 87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCV 143
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
+ ++DFG + + L QY S+ V P V + P +F + Y SKSD W
Sbjct: 144 K--VSDFGMT---RYVLDDQYVSS-------VGTKFP-VKWSAPEVFHYFKYSSKSDVWA 190
Query: 1042 AGTVAYEIF 1050
G + +E+F
Sbjct: 191 FGILMWEVF 199
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLR L + + + + EG+ L H+ HRDL + N L+D + C
Sbjct: 87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCV 143
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
+ ++DFG + + L QY S+ V P V + P +F + Y SKSD W
Sbjct: 144 K--VSDFGMT---RYVLDDQYVSS-------VGTKFP-VKWSAPEVFHYFKYSSKSDVWA 190
Query: 1563 AGTVAYEIF 1571
G + +E+F
Sbjct: 191 FGILMWEVF 199
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 186
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF-------- 1056
+ G +APEV T K D W+ G + Y + PF
Sbjct: 187 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPFNGANEYDI 235
Query: 1057 YQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ Y LPQ V E + L+ K+L PS R SA A
Sbjct: 236 LKKVEKGKYTFE-LPQWK-KVSESAKDLIRKMLTYVPSMRISARDA 279
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 186
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T K D W+ G + Y + PF
Sbjct: 187 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPF 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 20/181 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 982
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1042
+ DFG+S + +S L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADFGTSQQSVHSVS--------GLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1043 GTVAYEIFGHDNPFYQSARNTDYEVNAL------PQLNTNVPEVMRRLVAKLLENDPSDR 1096
+ Y I + PF + + +N + P + + P +R ++ DP R
Sbjct: 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 1097 P 1097
P
Sbjct: 275 P 275
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 1503
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1563
+ DFG+S + +S L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADFGTSQQSVHSVS--------GLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1564 GTVAYEIFGHDNPF 1577
+ Y I + PF
Sbjct: 215 AMILYTILTGEGPF 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 34/165 (20%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 996
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLART-- 213
Query: 997 SGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1052
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 214 --------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 1053 DNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ D + QL T PE M++L V +EN P
Sbjct: 260 -KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 30/120 (25%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 1517
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLART-- 213
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 214 --------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F QL + H++ R HRD+K N+ + + L + F SS T +
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT----------T 191
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
A L G M+PE + G ++F KSD W+ G + YE+ +PFY N
Sbjct: 192 AAHSLVGTPYYMSPE-RIHENG-YNF----KSDIWSLGCLLYEMAALQSPFYGDKMNLYS 245
Query: 1066 EVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
+ Q + + E +R+LV + DP RP
Sbjct: 246 LCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD 284
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F QL + H++ R HRD+K N+ + + L + F SS T +
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT----------T 191
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
A L G M+PE + G ++F KSD W+ G + YE+ +PFY N
Sbjct: 192 AAHSLVGTPYYMSPE-RIHENG-YNF----KSDIWSLGCLLYEMAALQSPFYGDKMN 242
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 271 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN------TNVPEVMRRLVAKLL 324
KSD W+ G + YE+ +PFY N + Q + + E +R+LV +
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI 275
Query: 325 ENDPSDRPS 333
DP RP
Sbjct: 276 NPDPEKRPD 284
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 712 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN------TNVPEVMRRLVAKLL 765
KSD W+ G + YE+ +PFY N + Q + + E +R+LV +
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI 275
Query: 766 ENDPSDRPS 774
DP RP
Sbjct: 276 NPDPEKRPD 284
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 916 FILMKKYNTDLRNYLRER-CAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+I ++ L+ Y+ ++ A L + E I L Q G+ HL+ HRDLK NIL+
Sbjct: 94 YIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
+ + +I+DFG K + S + G +APE + + Y
Sbjct: 153 MPNAHGKIKAMISDFG--LCKKLAVGRHSFSRRSGVPGTEGWIAPE--MLSEDCKENPTY 208
Query: 1035 SKSDAWTAGTVAYEIFGH-DNPFYQSARNTDYEVNALPQLNTNVPE-----VMRRLVAKL 1088
+ D ++AG V Y + +PF +S + + L+ PE + R L+ K+
Sbjct: 209 T-VDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKM 267
Query: 1089 LENDPSDRPSAE 1100
+ DP RPSA+
Sbjct: 268 IAMDPQKRPSAK 279
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 83/233 (35%), Gaps = 53/233 (22%)
Query: 1437 FILMKKYNTDLRNYLRER-CAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+I ++ L+ Y+ ++ A L + E I L Q G+ HL+ HRDLK NIL+
Sbjct: 94 YIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
+ + +I+DFG K + S + G +APE+
Sbjct: 153 MPNAHGKIKAMISDFG--LCKKLAVGRHSFSRRSGVPGTEGWIAPEML------------ 198
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGH 1615
D T +IF FY Y I
Sbjct: 199 -SEDCKENPTYTVDIFSAGCVFY-------------------------------YVISEG 226
Query: 1616 DNPFYQSARNTDYEVNALPQLNTNVPE-----VMRRLVAKLLENDPSDRPSAE 1663
+PF +S + + L+ PE + R L+ K++ DP RPSA+
Sbjct: 227 SHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK 279
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+T+ + ++ HRDLK +N+LL+ + + I DFG S + S
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLS------THFEAS 182
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
+ G +APEV T K D W+ G + Y + PF + +
Sbjct: 183 KKXKDKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPFNGA---NE 232
Query: 1065 YEV----------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
Y++ LPQ V E + L+ K L PS R SA A
Sbjct: 233 YDILKKVEKGKYTFELPQWK-KVSESAKDLIRKXLTYVPSXRISARDA 279
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+T+ + ++ HRDLK +N+LL+ + + I DFG S + S
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDA--NIRIIDFGLS------THFEAS 182
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T K D W+ G + Y + PF
Sbjct: 183 KKXKDKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPF 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 30/160 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HRD+K +LL S++N+ P + + F G+++Q +
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLL-ASKENSAP-VKLGGF--------GVAIQLGESG 189
Query: 1008 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR-- 1061
+ GG V MAPEV P Y K D W G + + + PFY +
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFYGTKERL 242
Query: 1062 -----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
Y++N P+ +++ E + LV ++L DP++R
Sbjct: 243 FEGIIKGKYKMN--PRQWSHISESAKDLVRRMLMLDPAER 280
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HRD+K +LL S++N+ P + + F G+++Q +
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLL-ASKENSAP-VKLGGF--------GVAIQLGESG 189
Query: 1529 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+ GG V MAPEV P Y K D W G + + + PFY
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFY 236
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 118 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV-----NSNL 172
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1040
++DFG S + Y+SA LGG + + P + + S SD W
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVW 224
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSD 1095
+ G V +E+ + Y N D +NA+ Q + P + +L+ + D +
Sbjct: 225 SYGIVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNH 283
Query: 1096 RP 1097
RP
Sbjct: 284 RP 285
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 118 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV-----NSNL 172
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1561
++DFG S + Y+SA LGG + + P + + S SD W
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVW 224
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
+ G V +E+ + Y N D
Sbjct: 225 SYGIVMWEVMSYGERPYWDMTNQD 248
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 278
++DFG S + Y+SA LGG + + P + + S SD W+ G
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVWSYG 227
Query: 279 TVAYEIFGHDNPFYQSARNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSDRP 332
V +E+ + Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 228 IVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 285
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 719
++DFG S + Y+SA LGG + + P + + S SD W+ G
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVWSYG 227
Query: 720 TVAYEIFGHDNPFYQSARNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSDRP 773
V +E+ + Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 228 IVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 20/181 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 982
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1042
+ DF GLS Q + L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADF--------GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1043 GTVAYEIFGHDNPFYQSARNTDYEVNAL------PQLNTNVPEVMRRLVAKLLENDPSDR 1096
+ Y I + PF + + +N + P + + P +R ++ DP R
Sbjct: 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 1097 P 1097
P
Sbjct: 275 P 275
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 1503
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1563
+ DF GLS Q + L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADF--------GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1564 GTVAYEIFGHDNPF 1577
+ Y I + PF
Sbjct: 215 AMILYTILTGEGPF 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 209
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF-------- 1056
+ G +APEV T K D W+ G + Y + PF
Sbjct: 210 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPFNGANEYDI 258
Query: 1057 YQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ Y LPQ V E + L+ K+L PS R SA A
Sbjct: 259 LKKVEKGKYTFE-LPQWK-KVSESAKDLIRKMLTYVPSMRISARDA 302
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 209
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T K D W+ G + Y + PF
Sbjct: 210 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPF 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus
Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With Fluorinated
Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 227 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 282
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 227 SLGILLYDMVCGDIPF 242
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 53/256 (20%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 72 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 110
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 111 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 158
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+NILL N + ITDFG++ ++A + G ++PE+
Sbjct: 159 ENILL-----NEDMHIQITDFGTAKVLSPESKQARANAFV---GTAQYVSPELLTEKSAC 210
Query: 1029 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RRL 1084
S SD W G + Y++ PF A N + +L + PE R L
Sbjct: 211 KS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDL 262
Query: 1085 VAKLLENDPSDRPSAE 1100
V KLL D + R E
Sbjct: 263 VEKLLVLDATKRLGCE 278
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 42/186 (22%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 89 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 127
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 128 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 175
Query: 1512 SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
++ ++A + G ++PE+ S SD W G + Y++
Sbjct: 176 TAKVLSPESKQARANAFV---GTAQYVSPELLTEKSACKS------SDLWALGCIIYQLV 226
Query: 1572 GHDNPF 1577
PF
Sbjct: 227 AGLPPF 232
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 210
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF-------- 1056
+ G +APEV T K D W+ G + Y + PF
Sbjct: 211 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPFNGANEYDI 259
Query: 1057 YQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ Y LPQ V E + L+ K+L PS R SA A
Sbjct: 260 LKKVEKGKYTFE-LPQWK-KVSESAKDLIRKMLTYVPSMRISARDA 303
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+T+++ ++ HRDLK +N+LL+ + + I DFG S ++ M+
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD--ANIRIIDFGLSTHFEASKKMK-- 210
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T K D W+ G + Y + PF
Sbjct: 211 ----DKIGTAYYIAPEVLHGTYD-------EKCDVWSTGVILYILLSGCPPF 251
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 30/160 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HRD+K +LL S++N+ P + + F G+++Q +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLL-ASKENSAP-VKLGGF--------GVAIQLGESG 187
Query: 1008 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR-- 1061
+ GG V MAPEV P Y K D W G + + + PFY +
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
Query: 1062 -----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
Y++N P+ +++ E + LV ++L DP++R
Sbjct: 241 FEGIIKGKYKMN--PRQWSHISESAKDLVRRMLMLDPAER 278
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HRD+K +LL S++N+ P + + F G+++Q +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLL-ASKENSAP-VKLGGF--------GVAIQLGESG 187
Query: 1529 IELGGNVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+ GG V MAPEV P Y K D W G + + + PFY
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREP-------YGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 228 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 283
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 228 SLGILLYDMVCGDIPF 243
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 104 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 156
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M P V
Sbjct: 157 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 193
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ + + D + QL T PE M++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 253 LQPTVRTYVENRPK 266
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 104 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 156
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M P V
Sbjct: 157 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 193
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ + + D W++
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNK 237
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 228 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 283
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 228 SLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531
Length = 312
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 227 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 282
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 227 SLGILLYDMVCGDIPF 242
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M P V
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 192
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ + + D + QL T PE M++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 252 LQPTVRTYVENRPK 265
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M P V
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 192
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ + + D W++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNK 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 242 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 297
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 242 SLGILLYDMVCGDIPF 257
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 168
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 169 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-K 215
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ D + QL T PE M++L V +EN P
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 168
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 169 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
++S E + Q+ +G+ H++ + H DLK +NI+ N +L + DFG +
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN---ELKLIDFGLTAHL 307
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
S++ ++ G APEVA P V Y +D W+ G ++Y + +P
Sbjct: 308 DPKQSVKVTT------GTAEFAAPEVAEGKP-----VGYY-TDMWSVGVLSYILLSGLSP 355
Query: 1056 FYQSARNTDYEVNALPQLNTN--------VPEVMRRLVAKLLENDPSDR 1096
F N D + + + N + E + + KLL DP+ R
Sbjct: 356 F--GGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 402
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
++S E + Q+ +G+ H++ + H DLK +NI+ N +L + DFG +
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN---ELKLIDFGLTAHL 307
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
S++ ++ G APEVA P V Y +D W+ G ++Y + +P
Sbjct: 308 DPKQSVKVTT------GTAEFAAPEVAEGKP-----VGYY-TDMWSVGVLSYILLSGLSP 355
Query: 1577 F 1577
F
Sbjct: 356 F 356
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 942 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1000
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY--- 1057
A G MAPE+ L FS V+Y + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFS-VDY-----FALGVTLYEMIAARGPFRARG 393
Query: 1058 QSARNTDYEVNALPQLNT---NVPEVMRRLVAKLLENDPSDR 1096
+ N + + L Q T + LL+ DP R
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 1463 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1521
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
A G MAPE+ L FS V+Y + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFS-VDY-----FALGVTLYEMIAARGPF 389
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 32/164 (19%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 1055 PFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
F R+ D + QL T PE M++L V +EN P
Sbjct: 224 LF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 99 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV-----NSNL 153
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1040
++DFG S + ++ Y+S+ LGG + + P +F + S SDAW
Sbjct: 154 VCKVSDFGLSRFLEENSSDPTYTSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAW 205
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNT-----NVPEVMRRLVAKLLENDPSD 1095
+ G V +E+ Y N D +NA+ Q + P + +L+ + D +
Sbjct: 206 SYGIVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNA 264
Query: 1096 RP 1097
RP
Sbjct: 265 RP 266
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 99 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV-----NSNL 153
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1561
++DFG S + ++ Y+S+ LGG + + P +F + S SDAW
Sbjct: 154 VCKVSDFGLSRFLEENSSDPTYTSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAW 205
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
+ G V +E+ Y N D
Sbjct: 206 SYGIVMWEVMSFGERPYWDMSNQD 229
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 278
++DFG S + ++ Y+S+ LGG + + P +F + S SDAW+ G
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAWSYG 208
Query: 279 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNT-----NVPEVMRRLVAKLLENDPSDRP 332
V +E+ Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 209 IVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 719
++DFG S + ++ Y+S+ LGG + + P +F + S SDAW+ G
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAWSYG 208
Query: 720 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNT-----NVPEVMRRLVAKLLENDPSDRP 773
V +E+ Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 209 IVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS + F L++G+ +L+ + HRD+K N+L+ ED + I DFG S K
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV--GEDG---HIKIADFGVSNEFK 188
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
++ ++ G A MAPE T +FS D W G Y PF
Sbjct: 189 GSDALLSNTV-----GTPAFMAPESLSETRKIFSG---KALDVWAMGVTLYCFVFGQCPF 240
Query: 1057 YQS---ARNTDYEVNAL--PQLNTNVPEVMRRLVAKLLENDPSDR 1096
++ + AL P ++ E ++ L+ ++L+ +P R
Sbjct: 241 MDERIMCLHSKIKSQALEFPD-QPDIAEDLKDLITRMLDKNPESR 284
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS + F L++G+ +L+ + HRD+K N+L+ ED + I DFG S K
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV--GEDG---HIKIADFGVSNEFK 188
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
++ ++ G A MAPE T +FS D W G Y PF
Sbjct: 189 GSDALLSNTV-----GTPAFMAPESLSETRKIFSG---KALDVWAMGVTLYCFVFGQCPF 240
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 227 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 282
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 227 SLGILLYDMVCGDIPF 242
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 942 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1000
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY--- 1057
A G MAPE+ L FS D + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFSV------DYFALGVTLYEMIAARGPFRARG 393
Query: 1058 QSARNTDYEVNALPQLNT---NVPEVMRRLVAKLLENDPSDR 1096
+ N + + L Q T + LL+ DP R
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 1463 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1521
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
A G MAPE+ L FS D + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFSV------DYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 942 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1000
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY--- 1057
A G MAPE+ L FS D + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFSV------DYFALGVTLYEMIAARGPFRARG 393
Query: 1058 QSARNTDYEVNALPQLNT---NVPEVMRRLVAKLLENDPSDR 1096
+ N + + L Q T + LL+ DP R
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 1463 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1521
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
A G MAPE+ L FS D + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFSV------DYFALGVTLYEMIAARGPF 389
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 50 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 88
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 89 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 136
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 137 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 188 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 239
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 240 LVEKLLVLDATKRLGCE 256
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 67 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 105
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 106 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 153
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 154 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 203
Query: 1571 FGHDNPF 1577
PF
Sbjct: 204 VAGLPPF 210
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 71 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 109
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 110 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 157
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 158 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 209 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 261 LVEKLLVLDATKRLGCE 277
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 88 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 126
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 127 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 174
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 175 TAKV----LSPESKQARANSFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 224
Query: 1571 FGHDNPF 1577
PF
Sbjct: 225 VAGLPPF 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 16/122 (13%)
Query: 935 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 994
+L E LF Q+L GV + + H HRDLK +N+LLD + I DFG S
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNM 165
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1054
G ++ S G+ APEV + D W++G + Y +
Sbjct: 166 MSDGEFLRXSC------GSPNYAAPEVISG-----RLYAGPEVDIWSSGVILYALLCGTL 214
Query: 1055 PF 1056
PF
Sbjct: 215 PF 216
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 16/122 (13%)
Query: 1456 AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 1515
+L E LF Q+L GV + + H HRDLK +N+LLD + I DFG S
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNM 165
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDN 1575
G ++ S G+ APEV + D W++G + Y +
Sbjct: 166 MSDGEFLRXSC------GSPNYAAPEVISG-----RLYAGPEVDIWSSGVILYALLCGTL 214
Query: 1576 PF 1577
PF
Sbjct: 215 PF 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 32/164 (19%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 1055 PFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
F R+ D + QL T PE M++L V +EN P
Sbjct: 224 LF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 49 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 87
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 88 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 135
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 136 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 187 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 238
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 239 LVEKLLVLDATKRLGCE 255
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 66 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 104
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 105 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 152
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 153 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 202
Query: 1571 FGHDNPF 1577
PF
Sbjct: 203 VAGLPPF 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 71 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 109
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 110 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 157
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 158 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 209 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 261 LVEKLLVLDATKRLGCE 277
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 88 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 126
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 127 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 174
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 175 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 224
Query: 1571 FGHDNPF 1577
PF
Sbjct: 225 VAGLPPF 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 942 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1000
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY--- 1057
A G MAPE+ L FS V+Y + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFS-VDY-----FALGVTLYEMIAARGPFRARG 393
Query: 1058 QSARNTDYEVNALPQLNT---NVPEVMRRLVAKLLENDPSDR 1096
+ N + + L Q T + LL+ DP R
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 1463 RILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1521
R + +T Q++ G+ HL+ +RDLK +N+LLD +D + I+D G + K+G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD--DDGN---VRISDLGLAVELKAGQT 344
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
A G MAPE+ L FS V+Y + G YE+ PF
Sbjct: 345 KTKGYA-----GTPGFMAPELLLGEEYDFS-VDY-----FALGVTLYEMIAARGPF 389
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 52 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 90
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 91 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 138
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 139 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 190 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 241
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 242 LVEKLLVLDATKRLGCE 258
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 69 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 107
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 108 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 155
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 156 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 205
Query: 1571 FGHDNPF 1577
PF
Sbjct: 206 VAGLPPF 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 51 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 89
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 90 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 137
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 138 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 189 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 240
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 241 LVEKLLVLDATKRLGCE 257
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 68 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 106
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 107 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 154
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 155 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 204
Query: 1571 FGHDNPF 1577
PF
Sbjct: 205 VAGLPPF 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 56 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 94
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 95 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 142
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 143 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 194 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 245
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 246 LVEKLLVLDATKRLGCE 262
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 73 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 111
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 112 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 159
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 160 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 209
Query: 1571 FGHDNPF 1577
PF
Sbjct: 210 VAGLPPF 216
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 242 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 297
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 242 SLGILLYDMVCGDIPF 257
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 212 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 264 LVEKLLVLDATKRLGCE 280
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 178 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 227
Query: 1571 FGHDNPF 1577
PF
Sbjct: 228 VAGLPPF 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
++S E + Q+ +G+ H++ + H DLK +NI+ N +L + DFG +
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN---ELKLIDFGLTAHL 201
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
S++ ++ G APEVA P V Y +D W+ G ++Y + +P
Sbjct: 202 DPKQSVKVTT------GTAEFAAPEVAEGKP-----VGYY-TDMWSVGVLSYILLSGLSP 249
Query: 1056 FYQSARNTDYEVNALPQLNTN--------VPEVMRRLVAKLLENDPSDR 1096
F N D + + + N + E + + KLL DP+ R
Sbjct: 250 F--GGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 296
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
++S E + Q+ +G+ H++ + H DLK +NI+ N +L + DFG +
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN---ELKLIDFGLTAHL 201
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
S++ ++ G APEVA P V Y +D W+ G ++Y + +P
Sbjct: 202 DPKQSVKVTT------GTAEFAAPEVAEGKP-----VGYY-TDMWSVGVLSYILLSGLSP 249
Query: 1577 F 1577
F
Sbjct: 250 F 250
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And The
Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 228 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 283
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 228 SLGILLYDMVCGDIPF 243
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATVCQLYLWAP 1113
P E ++ + P
Sbjct: 295 PKFEQIVSILDKLIRNP 311
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 212 XKS------SDLWALGCIIYQLVAGLPPF--RAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 264 LVEKLLVLDATKRLGCE 280
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 178 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSAXKS------SDLWALGCIIYQL 227
Query: 1571 FGHDNPF 1577
PF
Sbjct: 228 VAGLPPF 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 934 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
C + M HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DF
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDF 170
Query: 990 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTV 1045
G + T G +M P V P + + Y ++ D W+ G +
Sbjct: 171 GLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 1046 AYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
E+ H F R+ D + QL T PE M++L V +EN P
Sbjct: 215 MGEMVRHKILF--PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 29/127 (22%)
Query: 1455 CAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
C + M HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DF
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDF 170
Query: 1511 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTV 1566
G + T G +M P V P + + Y ++ D W+ G +
Sbjct: 171 GLART----------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 1567 AYEIFGH 1573
E+ H
Sbjct: 215 MGEMVRH 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 79 NKVPYVTRERDV-MSRLD----HPFFVKLYFCFQD------DEKLYFGLS---------- 117
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 118 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 165
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 166 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 217 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 268
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 269 LVEKLLVLDATKRLGCE 285
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 96 HPFFVKLYFCFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 134
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 135 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 182
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 183 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 232
Query: 1571 FGHDNPF 1577
PF
Sbjct: 233 VAGLPPF 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 159
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 160 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 207
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 208 LLVGKPPFETSCLKETY--LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 259
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 159
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 160 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 207
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 208 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 244
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 245 -----------------LIQKMLQTDPTARPT 259
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 227 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 282
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 128 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 180
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 226
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 227 SLGILLYDMVCGDIPF 242
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 212 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 264 LVEKLLVLDATKRLGCE 280
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 178 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 227
Query: 1571 FGHDNPF 1577
PF
Sbjct: 228 VAGLPPF 234
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 228 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 283
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 129 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 181
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 227
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 228 SLGILLYDMVCGDIPF 243
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At 2.6
Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 242 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 297
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 143 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 195
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 241
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 242 SLGILLYDMVCGDIPF 257
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
DLR +L++ L +L+ + +L R HRD+K DNILLD +
Sbjct: 101 DLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD-----EHGHV 154
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL-FSFVNYSKSDAWTAG 1043
ITDF + + + + G MAPE+ + G +SF D W+ G
Sbjct: 155 HITDFNIAAM------LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA----VDWWSLG 204
Query: 1044 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNV-------PEVMRRLVAKLLENDPSDR 1096
AYE+ P++ + + E+ + T V + M L+ KLLE +P R
Sbjct: 205 VTAYELLRGRRPYHIRSSTSSKEI--VHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
Query: 1097 PS 1098
S
Sbjct: 263 FS 264
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
DLR +L++ L +L+ + +L R HRD+K DNILLD +
Sbjct: 101 DLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD-----EHGHV 154
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL-FSFVNYSKSDAWTAG 1564
ITDF + + + + G MAPE+ + G +SF D W+ G
Sbjct: 155 HITDFNIAAM------LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA----VDWWSLG 204
Query: 1565 TVAYEIFGHDNPFY 1578
AYE+ P++
Sbjct: 205 VTAYELLRGRRPYH 218
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 245 LGGNVALMAPEVALATPGL-FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN 303
+ G MAPE+ + G +SF D W+ G AYE+ P++ + + E+
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFA----VDWWSLGVTAYELLRGRRPYHIRSSTSSKEI- 228
Query: 304 ALPQLNTNV-------PEVMRRLVAKLLENDPSDRPS 333
+ T V + M L+ KLLE +P R S
Sbjct: 229 -VHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 686 LGGNVALMAPEVALATPGL-FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN 744
+ G MAPE+ + G +SF D W+ G AYE+ P++ + + E+
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFA----VDWWSLGVTAYELLRGRRPYHIRSSTSSKEI- 228
Query: 745 ALPQLNTNV-------PEVMRRLVAKLLENDPSDRPS 774
+ T V + M L+ KLLE +P R S
Sbjct: 229 -VHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 75 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 113
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 114 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 161
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 162 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 213 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 265 LVEKLLVLDATKRLGCE 281
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 92 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 130
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 131 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 178
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 179 TAKV----LSPESKQARANSFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 228
Query: 1571 FGHDNPF 1577
PF
Sbjct: 229 VAGLPPF 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 212 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 264 LVEKLLVLDATKRLGCE 280
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 178 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 227
Query: 1571 FGHDNPF 1577
PF
Sbjct: 228 VAGLPPF 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 56/253 (22%)
Query: 852 QYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGR 911
+Y +NE +MN + HP ++ +H AF D + + L R+
Sbjct: 92 KYTVKNEISIMNQLH----HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED---- 143
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
K ++ NY+R+ C EG+ H++ H H D+K +NI
Sbjct: 144 -------YKMSEAEVINYMRQAC----------------EGLKHMHEHSIVHLDIKPENI 180
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
+ C E + I DFG + ++ ++A E APE+ P F
Sbjct: 181 M--C-ETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA------APEIVDREPVGFY- 230
Query: 1032 VNYSKSDAWTAGTVAYEIFGHDNPF--------YQSARNTDYEVNALPQLNTNVPEVMRR 1083
+D W G + Y + +PF Q+ + D+E + ++ PE +
Sbjct: 231 -----TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE-DAFSSVSPEA-KD 283
Query: 1084 LVAKLLENDPSDR 1096
+ LL+ +P R
Sbjct: 284 FIKNLLQKEPRKR 296
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 42/193 (21%)
Query: 1385 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN 1444
S+ N HP ++ +H AF D + + L R+ K
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED-----------YKMSE 148
Query: 1445 TDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ 1504
++ NY+R+ C EG+ H++ H H D+K +NI+ C E
Sbjct: 149 AEVINYMRQAC----------------EGLKHMHEHSIVHLDIKPENIM--C-ETKKASS 189
Query: 1505 LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1564
+ I DFG + ++ ++A E APE+ P F +D W G
Sbjct: 190 VKIIDFGLATKLNPDEIVKVTTATAEFA------APEIVDREPVGFY------TDMWAIG 237
Query: 1565 TVAYEIFGHDNPF 1577
+ Y + +PF
Sbjct: 238 VLGYVLLSGLSPF 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 932 ERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGS 991
E LS+ I Q+L+G+ H + R HRD+K NIL+D ++ L I DFG
Sbjct: 103 ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-----TLKIFDFGI 157
Query: 992 SYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG 1051
+ LS + + G V +PE A +D ++ G V YE+
Sbjct: 158 A----KALSETSLTQTNHVLGTVQYFSPEQAKGE------ATDECTDIYSIGIVLYEMLV 207
Query: 1052 HDNPFYQSARNT---DYEVNALPQLNTNV----PEVMRRLVAKLLENDPSDR 1096
+ PF + + +++P + T+V P+ + ++ + E D ++R
Sbjct: 208 GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 1453 ERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGS 1512
E LS+ I Q+L+G+ H + R HRD+K NIL+D ++ L I DFG
Sbjct: 103 ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-----TLKIFDFGI 157
Query: 1513 SYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG 1572
+ LS + + G V +PE A +D ++ G V YE+
Sbjct: 158 A----KALSETSLTQTNHVLGTVQYFSPEQAKGE------ATDECTDIYSIGIVLYEMLV 207
Query: 1573 HDNPF 1577
+ PF
Sbjct: 208 GEPPF 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 72 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 110
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 111 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 158
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 159 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 210 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 262 LVEKLLVLDATKRLGCE 278
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 89 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 127
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 128 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 175
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 176 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 225
Query: 1571 FGHDNPF 1577
PF
Sbjct: 226 VAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 72 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 110
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 111 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 158
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 159 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 210 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 262 LVEKLLVLDATKRLGCE 278
Score = 37.7 bits (86), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 89 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 127
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 128 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 175
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 176 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 225
Query: 1571 FGHDNPF 1577
PF
Sbjct: 226 VAGLPPF 232
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 26/163 (15%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--LVITDFGSSYTNKSGLSMQ 1002
L Q++ + + + H+DLK +NIL +T P + I DFG + KS +
Sbjct: 129 LMKQMMNALAYFHSQHVVHKDLKPENILF----QDTSPHSPIKIIDFGLAELFKSD---E 181
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA-- 1060
+S+ G MAPEV F K D W+AG V Y + PF ++
Sbjct: 182 HST---NAAGTALYMAPEV-------FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE 231
Query: 1061 ----RNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ T E N + P+ + L+ ++L DP RPSA
Sbjct: 232 EVQQKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSA 273
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--LVITDFGSSYTNKSGLSMQ 1523
L Q++ + + + H+DLK +NIL +T P + I DFG + KS +
Sbjct: 129 LMKQMMNALAYFHSQHVVHKDLKPENILF----QDTSPHSPIKIIDFGLAELFKSD---E 181
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+S+ G MAPEV F K D W+AG V Y + PF
Sbjct: 182 HST---NAAGTALYMAPEV-------FKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 214 NTCPQ--LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 271
+T P + I DFG + KS ++S+ G MAPEV F K
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSD---EHST---NAAGTALYMAPEV-------FKRDVTFK 205
Query: 272 SDAWTAGTVAYEIFGHDNPFYQSA------RNTDYEVNALPQLNTNVPEVMRRLVAKLLE 325
D W+AG V Y + PF ++ + T E N + P+ + L+ ++L
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV-DLLKQMLT 264
Query: 326 NDPSDRPSA 334
DP RPSA
Sbjct: 265 KDPERRPSA 273
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 655 NTCPQ--LVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 712
+T P + I DFG + KS ++S+ G MAPEV F K
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSD---EHST---NAAGTALYMAPEV-------FKRDVTFK 205
Query: 713 SDAWTAGTVAYEIFGHDNPFYQSA------RNTDYEVNALPQLNTNVPEVMRRLVAKLLE 766
D W+AG V Y + PF ++ + T E N + P+ + L+ ++L
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV-DLLKQMLT 264
Query: 767 NDPSDRPSA 775
DP RPSA
Sbjct: 265 KDPERRPSA 273
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 212 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 264 LVEKLLVLDATKRLGCE 280
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 178 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 227
Query: 1571 FGHDNPF 1577
PF
Sbjct: 228 VAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 72 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 110
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 111 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 158
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 159 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 210 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 262 LVEKLLVLDATKRLGCE 278
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 89 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 127
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 128 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 175
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 176 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 225
Query: 1571 FGHDNPF 1577
PF
Sbjct: 226 VAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 75 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 113
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 114 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 161
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 162 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + PE R
Sbjct: 213 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 265 LVEKLLVLDATKRLGCE 281
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 92 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 130
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 131 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 178
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 179 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 228
Query: 1571 FGHDNPF 1577
PF
Sbjct: 229 VAGLPPF 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V H + HRDLK +N+LL +L DFG + + + A
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKL--ADFGLAIEVEGEQQAWFGFA- 185
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF--------YQ 1058
G ++PEV P Y K D W G + Y + PF YQ
Sbjct: 186 ----GTPGYLSPEVLRKDP-------YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ 234
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ Y+ + P+ +T PE + L+ K+L +PS R +A
Sbjct: 235 QIKAGAYDFPS-PEWDTVTPEA-KDLINKMLTINPSKRITA 273
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 51/195 (26%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V H + HRDLK +N+LL +L DFG + + + A
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKL--ADFGLAIEVEGEQQAWFGFA- 185
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
G ++PEV P Y K D W G + Y + PF+ +
Sbjct: 186 ----GTPGYLSPEVLRKDP-------YGKPVDLWACGVILYILLVGYPPFWDEDQ----- 229
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
HR YQ + Y+ + P+ +T PE + L
Sbjct: 230 HR-----------------------------LYQQIKAGAYDFPS-PEWDTVTPEA-KDL 258
Query: 1648 VAKLLENDPSDRPSA 1662
+ K+L +PS R +A
Sbjct: 259 INKMLTINPSKRITA 273
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole Inhibitor
Vx3
Length = 333
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 148 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 200
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 201 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 246
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 247 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 302
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 148 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 200
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 201 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 246
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 247 SLGILLYDMVCGDIPF 262
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 969
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 970 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1024
NI++ DC+ L I DFG + T G +M P V
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 192
Query: 1025 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR 1083
P + + Y ++ D W+ G + E+ + + D + QL T PE M++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 1084 L---VAKLLENDPS 1094
L V +EN P
Sbjct: 252 LQPTVRTYVENRPK 265
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSM---HERI-LLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++I+M+ + +L C + M HER+ L Q+L G+ HL+ HRDLK
Sbjct: 103 DVYIVMELMDANL-------CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 1491 NILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LA 1545
NI++ DC+ L I DFG + T G +M P V
Sbjct: 156 NIVVKSDCT-------LKILDFGLART----------------AGTSFMMTPYVVTRYYR 192
Query: 1546 TPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
P + + Y ++ D W+ G + E+ + + D W++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNK 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+L G+ +L+ H HRD+K +NILL+ N+ + I DFG S S S Y
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLE--NKNSLLNIKIVDFGLS----SFFSKDYK 204
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
D G +APEV L N K D W+ G + Y + PF
Sbjct: 205 LRD--RLGTAYYIAPEV------LKKKYN-EKCDVWSCGVIMYILLCGYPPF 247
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+L G+ +L+ H HRD+K +NILL+ N+ + I DFG S S S Y
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLE--NKNSLLNIKIVDFGLS----SFFSKDYK 204
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
D G +APEV L N K D W+ G + Y + PF
Sbjct: 205 LRD--RLGTAYYIAPEV------LKKKYN-EKCDVWSCGVIMYILLCGYPPF 247
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 165
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 166 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 213
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 214 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 265
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 165
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 166 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 213
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 214 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 250
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 251 -----------------LIQKMLQTDPTARPT 265
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 161
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 162 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 209
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 210 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 261
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 161
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 162 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 209
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 210 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 246
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 247 -----------------LIQKMLQTDPTARPT 261
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 161
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 162 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 209
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 210 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 261
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 161
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 162 GLA------TKVEYDGERKKTLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 209
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 210 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 246
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 247 -----------------LIQKMLQTDPTARPT 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 183
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 184 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 231
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 232 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 283
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 183
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 184 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 231
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 232 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 268
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 269 -----------------LIQKMLQTDPTARPT 283
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 185
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 186 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 233
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS 1098
+ PF S Y + + ++P+ V L+ K+L+ DP+ RP+
Sbjct: 234 LLVGKPPFETSCLKETYL--RIKKNEYSIPKHINPVAASLIQKMLQTDPTARPT 285
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 58/212 (27%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R L+ E Q++ G +L+ +R HRDLK N+ L+ ED ++ I DF
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN--EDL---EVKIGDF 185
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + ++Y + L G +APEV L+ G SF + D W+ G + Y
Sbjct: 186 GLA------TKVEYDGERKKVLCGTPNYIAPEV-LSKKG-HSF----EVDVWSIGCIMYT 233
Query: 1570 IFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYE 1629
+ PF S Y K Y I H NP S
Sbjct: 234 LLVGKPPFETSCLKETYLRIK----------------KNEYSIPKHINPVAAS------- 270
Query: 1630 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
L+ K+L+ DP+ RP+
Sbjct: 271 -----------------LIQKMLQTDPTARPT 285
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 57/258 (22%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 74 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 112
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 113 YAKNGCLLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 160
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE
Sbjct: 161 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANSFVGTAQYVSPE------- 204
Query: 1028 LFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----R 1082
L + + SK SD W G + Y++ PF A N + +L + PE R
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
Query: 1083 RLVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 263 DLVEKLLVLDATKRLGCE 280
Score = 37.4 bits (85), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 91 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGCLLKYIRKIGS-----F 129
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 130 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 177
Query: 1512 SSYTNKSGLSMQYSSADI-ELGGNVALMAPEVALATPGLFSFVNYSK-SDAWTAGTVAYE 1569
++ LS + A G ++PE L + + SK SD W G + Y+
Sbjct: 178 TAKV----LSPESKQARANSFVGTAQYVSPE-------LLTEKSASKSSDLWALGCIIYQ 226
Query: 1570 IFGHDNPF 1577
+ PF
Sbjct: 227 LVAGLPPF 234
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 34/230 (14%)
Query: 882 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMH 940
+D I + S++ P + G Y +N L+I+M+ + + +R R L+
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED 125
Query: 941 ERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1000
E + L+G+ +L+ R HRD+K+ NILL NT + DFG +G
Sbjct: 126 EIATILQSTLKGLEYLHFMRKIHRDIKAGNILL-----NTEGHAKLADFGV-----AGQL 175
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQS 1059
+ + G MAPEV + Y+ +D W+ G A E+ P+
Sbjct: 176 TDXMAKRNXVIGTPFWMAPEV-------IQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
Query: 1060 ARNTDYEVNALPQLNTNVPEVMRR----------LVAKLLENDPSDRPSA 1099
+ + A+ + TN P R+ V + L P R +A
Sbjct: 229 -----HPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA 273
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 1403 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMH 1461
+D I + S++ P + G Y +N L+I+M+ + + +R R L+
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED 125
Query: 1462 ERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS 1521
E + L+G+ +L+ R HRD+K+ NILL NT + DFG +G
Sbjct: 126 EIATILQSTLKGLEYLHFMRKIHRDIKAGNILL-----NTEGHAKLADFGV-----AGQL 175
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPF 1577
+ + G MAPEV + Y+ +D W+ G A E+ P+
Sbjct: 176 TDXMAKRNXVIGTPFWMAPEV-------IQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-K 222
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ D + QL T PE M++L V +EN P
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDXT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+ H
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+LF +M+ N Y + C + + +++ G+ L+ +RDLK DNILL
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D +D + I DFG N G + G +APE+ L
Sbjct: 152 D--KDG---HIKIADFGMCKENMLG-----DAKTNXFCGTPDYIAPEILLGQ-------K 194
Query: 1555 YSKS-DAWTAGTVAYEIFGHDNPF--------YQSARNTDYWHRKWL 1592
Y+ S D W+ G + YE+ +PF + S R + ++ +WL
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 241
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 24/188 (12%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+LF +M+ N Y + C + + +++ G+ L+ +RDLK DNILL
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D +D + I DFG N G + G +APE+ L
Sbjct: 152 D--KDG---HIKIADFGMCKENMLG-----DAKTNXFCGTPDYIAPEILLGQ-------K 194
Query: 1034 YSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRR----LVAKL 1088
Y+ S D W+ G + YE+ +PF+ ++ + +++ N P + + L+ KL
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFH--GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 252
Query: 1089 LENDPSDR 1096
+P R
Sbjct: 253 FVREPEKR 260
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 128 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 182
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 233
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 234 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 292
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 293 PKFEQIVSI 301
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 128 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 182
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 233
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 234 YGIVLWEVMSYGERPYWEMSNQD 256
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 994
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1052
SG S ++ + G APE+ + L + ++S D ++ G V Y I
Sbjct: 178 LDSGQSSFRTNLN-NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 1053 DNPF---YQSARNTDYEVNALPQL----NTNVPEVMRRLVAKLLENDPSDRPSA 1099
+PF Y N + +L ++ + ++ L+++++++DP RP+A
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 1515
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1573
SG S ++ + G APE+ + L + ++S D ++ G V Y I
Sbjct: 178 LDSGQSSFRTNLN-NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 1574 DNPF 1577
+PF
Sbjct: 237 KHPF 240
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 34/165 (20%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 996
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLART-- 175
Query: 997 SGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1052
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 --------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-K 220
Query: 1053 DNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ + D + QL T PE M++L V +EN P
Sbjct: 221 GGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 31/136 (22%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 1517
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLART-- 175
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGH 1573
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 --------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-K 220
Query: 1574 DNPFYQSARNTDYWHR 1589
+ + D W++
Sbjct: 221 GGVLFPGTDHIDQWNK 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 118 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 172
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 173 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 223
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 224 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 282
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 283 PKFEQIVSI 291
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 118 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 172
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 173 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 223
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 224 YGIVLWEVMSYGERPYWEMSNQD 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 155
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 206
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 265
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 266 PKFEQIVSI 274
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 155
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 206
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
N L ++ + DL+ Y+ ++ +SM QL+ GV + R HRDLK N+
Sbjct: 105 NHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163
Query: 972 LLDCSEDNTCPQLVITDFG 990
LL S+ + P L I DFG
Sbjct: 164 LLSVSDASETPVLKIGDFG 182
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
N L ++ + DL+ Y+ ++ +SM QL+ GV + R HRDLK N+
Sbjct: 105 NHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163
Query: 1493 LLDCSEDNTCPQLVITDFG 1511
LL S+ + P L I DFG
Sbjct: 164 LLSVSDASETPVLKIGDFG 182
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATVCQLYLWAP 1113
P E ++ + P
Sbjct: 295 PKFEQIVSILDKLIRNP 311
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 295 PKFEQIVSI 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 295 PKFEQIVSI 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATVCQLYLWAP 1113
P E ++ + P
Sbjct: 295 PKFEQIVSILDKLIRNP 311
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 295 PKFEQIVSI 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 155
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 206
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 265
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 266 PKFEQIVSI 274
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 155
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 206
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 908 GYGRNMSLFILMKKY--NTDLRNYLRER---CAQLSMHERILLFTQLLEGVTHLNMHRTA 962
G+ + IL+ KY N +L+ +L +S +R+ + G+ +L+
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
HRD+KS NILLD +N P+ ITDFG S K G + + + G + + PE
Sbjct: 162 HRDVKSINILLD---ENFVPK--ITDFGIS---KKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 1023 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA---------------RNTDYEV 1067
+ G + KSD ++ G V +E+ + QS N E
Sbjct: 214 IK--GRLT----EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 1068 NALPQLNTNV-PEVMRRL---VAKLLENDPSDRPS 1098
P L + PE +R+ K L DRPS
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 1429 GYGRNMSLFILMKKY--NTDLRNYLRER---CAQLSMHERILLFTQLLEGVTHLNMHRTA 1483
G+ + IL+ KY N +L+ +L +S +R+ + G+ +L+
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
HRD+KS NILLD +N P+ ITDFG S K G + + + G + + PE
Sbjct: 162 HRDVKSINILLD---ENFVPK--ITDFGIS---KKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 1544 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS 1580
+ G + KSD ++ G V +E+ + QS
Sbjct: 214 IK--GRLT----EKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATV 1105
P E ++
Sbjct: 295 PKFEQIVSI 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + R HRDLK++N+LLD + + I DFG S
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 158
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ +GG + A P LF Y + D W+ G + Y + PF
Sbjct: 159 NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + R HRDLK++N+LLD + + I DFG S
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 158
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ +GG + A P LF Y + D W+ G + Y + PF
Sbjct: 159 NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 28/163 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
LF Q+L V + + H HRDLK +N+LLD + I DFG S G ++ S
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNMMSDGEFLRTS 170
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G+ APEV + D W+ G + Y + PF + +
Sbjct: 171 C------GSPNYAAPEVISG-----RLYAGPEVDIWSCGVILYALLCGTLPF-----DDE 214
Query: 1065 YEVNALPQLNTNV---PEVMRRLVAKL----LENDPSDRPSAE 1100
+ ++ V PE + R VA L L+ DP R + +
Sbjct: 215 HVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK 257
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
LF Q+L V + + H HRDLK +N+LLD + I DFG S G ++ S
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNMMSDGEFLRTS 170
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
G+ APEV + D W+ G + Y + PF
Sbjct: 171 C------GSPNYAAPEVISG-----RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + R HRDLK++N+LLD + + I DFG S
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ +GG + A P LF Y + D W+ G + Y + PF
Sbjct: 162 NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + R HRDLK++N+LLD + + I DFG S
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ +GG + A P LF Y + D W+ G + Y + PF
Sbjct: 162 NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 908 GYGRNMSLFILMKKY--NTDLRNYLRER---CAQLSMHERILLFTQLLEGVTHLNMHRTA 962
G+ + IL+ KY N +L+ +L +S +R+ + G+ +L+
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
HRD+KS NILLD +N P+ ITDFG S K G + + + G + + PE
Sbjct: 162 HRDVKSINILLD---ENFVPK--ITDFGIS---KKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 1023 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA---------------RNTDYEV 1067
+ G + KSD ++ G V +E+ + QS N E
Sbjct: 214 IK--GRLT----EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 1068 NALPQLNTNV-PEVMRRL---VAKLLENDPSDRPS 1098
P L + PE +R+ K L DRPS
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 1429 GYGRNMSLFILMKKY--NTDLRNYLRER---CAQLSMHERILLFTQLLEGVTHLNMHRTA 1483
G+ + IL+ KY N +L+ +L +S +R+ + G+ +L+
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
HRD+KS NILLD +N P+ ITDFG S K G + + + G + + PE
Sbjct: 162 HRDVKSINILLD---ENFVPK--ITDFGIS---KKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 1544 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS 1580
+ G + KSD ++ G V +E+ + QS
Sbjct: 214 IK--GRLT----EKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 903 LNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTA 962
L PT YG S+++++ +DL + H R L+ QLL G+ +++ +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLRGLKYMHSAQVI 181
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAP 1019
HRDLK N+L+ + C +L I DFG + GL + + VA AP
Sbjct: 182 HRDLKPSNLLV----NENC-ELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 1020 EVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1056
E+ + S Y+++ D W+ G + E+ F
Sbjct: 233 EL------MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 1424 LNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTA 1483
L PT YG S+++++ +DL + H R L+ QLL G+ +++ +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLRGLKYMHSAQVI 181
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAP 1540
HRDLK N+L+ + C +L I DFG + GL + + VA AP
Sbjct: 182 HRDLKPSNLLV----NENC-ELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 1541 EVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1577
E+ + S Y+++ D W+ G + E+ F
Sbjct: 233 EL------MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +LRE+ + S+ + + + + G+ +L HRDL + NIL++ + C
Sbjct: 130 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN--SNLVCK 187
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y+++ GG + + P S+ + S SD W+
Sbjct: 188 ---VSDFGLSRVLEDDPEATYTTS----GGKIP-----IRWTAPEAISYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGH-DNPFYQ-SARNTDYEVNALPQLNT--NVPEVMRRLVAKLLENDPSDRP 1097
G V +E+ + + P+++ S +N +L T + P + +L+ + + + + RP
Sbjct: 236 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 295
Query: 1098 SAELAATVCQLYLWAP 1113
++ + AP
Sbjct: 296 KFADIVSILDKLIRAP 311
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +LRE+ + S+ + + + + G+ +L HRDL + NIL++ + C
Sbjct: 130 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN--SNLVCK 187
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y+++ GG + + P S+ + S SD W+
Sbjct: 188 ---VSDFGLSRVLEDDPEATYTTS----GGKIP-----IRWTAPEAISYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGH-DNPFYQ 1579
G V +E+ + + P+++
Sbjct: 236 FGIVMWEVMTYGERPYWE 253
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+F M+K DL+ L E L + + QLL GV H + HR HRDLK N+L+
Sbjct: 97 VFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI- 152
Query: 975 CSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
N+ L + DFG SYT++ +++ Y + D+ +G
Sbjct: 153 ----NSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMGSK------------ 195
Query: 1026 PGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD 1064
YS S D W+ G + E+ P + + D
Sbjct: 196 -------KYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDD 227
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F M+K DL+ L E L + + QLL GV H + HR HRDLK N+L+
Sbjct: 97 VFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI- 152
Query: 1496 CSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
N+ L + DFG SYT++ +++ Y + D+ +G
Sbjct: 153 ----NSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMGSK------------ 195
Query: 1547 PGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
YS S D W+ G + E+ P + + D
Sbjct: 196 -------KYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDD 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 27/219 (12%)
Query: 915 LFILMKKY--NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
L +++ +Y N L +LR Q ++ + + + + G+ +L+ HRDL + N+L
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 973 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPE-VALATPGLF 1029
+D + C ++DFG S + Y++ GG + + APE +A T F
Sbjct: 184 VDS--NLVCK---VSDFGLSRVLEDDPDAAYTTT----GGKIPIRWTAPEAIAFRT---F 231
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRL 1084
S S SD W+ G V +E+ + Y + N D E LP P + +L
Sbjct: 232 S----SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQL 286
Query: 1085 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPS 1123
+ D + RP +V + +P+ AT S
Sbjct: 287 MLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATVS 325
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 1436 LFILMKKY--NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
L +++ +Y N L +LR Q ++ + + + + G+ +L+ HRDL + N+L
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 1494 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPE-VALATPGLF 1550
+D + C ++DFG S + Y++ GG + + APE +A T F
Sbjct: 184 VDS--NLVCK---VSDFGLSRVLEDDPDAAYTTT----GGKIPIRWTAPEAIAFRT---F 231
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
S S SD W+ G V +E+ + Y + N D
Sbjct: 232 S----SASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ C LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLK--CQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ C LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLK--CQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+F M+K DL+ L E L + + QLL GV H + HR HRDLK N+L+
Sbjct: 97 VFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI- 152
Query: 975 CSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
N+ L + DFG SYT++ +++ Y + D+ +G
Sbjct: 153 ----NSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMGSK------------ 195
Query: 1026 PGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD 1064
YS S D W+ G + E+ P + + D
Sbjct: 196 -------KYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDD 227
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
+F M+K DL+ L E L + + QLL GV H + HR HRDLK N+L+
Sbjct: 97 VFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI- 152
Query: 1496 CSEDNTCPQLVITDFG---------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
N+ L + DFG SYT++ +++ Y + D+ +G
Sbjct: 153 ----NSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMGSK------------ 195
Query: 1547 PGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
YS S D W+ G + E+ P + + D
Sbjct: 196 -------KYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDD 227
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 148
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 250
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 148
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 195 SLGILLYDMVCGDIPF 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 28/163 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
LF Q+L V + + H HRDLK +N+LLD + I DFG S G ++ S
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNMMSDGEFLRDS 170
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
G+ APEV + D W+ G + Y + PF + +
Sbjct: 171 C------GSPNYAAPEVISG-----RLYAGPEVDIWSCGVILYALLCGTLPF-----DDE 214
Query: 1065 YEVNALPQLNTNV---PEVMRRLVAKL----LENDPSDRPSAE 1100
+ ++ V PE + R VA L L+ DP R + +
Sbjct: 215 HVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK 257
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
LF Q+L V + + H HRDLK +N+LLD + I DFG S G ++ S
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK-----IADFGLSNMMSDGEFLRDS 170
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
G+ APEV + D W+ G + Y + PF
Sbjct: 171 C------GSPNYAAPEVISG-----RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 78 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 136
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D + + I DFG S G ++ S G+ APEV + L++
Sbjct: 137 DEHLN-----VKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 181
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF 1056
+ D W+ G + Y + PF
Sbjct: 182 -PEVDVWSCGVILYVMLCRRLPF 203
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 78 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 136
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D + + I DFG S G ++ S G+ APEV + L++
Sbjct: 137 DEHLN-----VKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 181
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+ G + Y + PF
Sbjct: 182 -PEVDVWSCGVILYVMLCRRLPF 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 903 LNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTA 962
L PT YG S+++++ +DL + H R L+ QLL G+ +++ +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLRGLKYMHSAQVI 180
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAP 1019
HRDLK N+L+ + C +L I DFG + GL + + VA AP
Sbjct: 181 HRDLKPSNLLV----NENC-ELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 1020 EVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1056
E+ + S Y+++ D W+ G + E+ F
Sbjct: 232 EL------MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 1424 LNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTA 1483
L PT YG S+++++ +DL + H R L+ QLL G+ +++ +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLRGLKYMHSAQVI 180
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAP 1540
HRDLK N+L+ + C +L I DFG + GL + + VA AP
Sbjct: 181 HRDLKPSNLLV----NENC-ELKIGDFGMA----RGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 1541 EVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1577
E+ + S Y+++ D W+ G + E+ F
Sbjct: 232 EL------MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With (3e)-3-[(4-
Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 100 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 152
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 198
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 199 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 254
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 100 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 152
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 198
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 199 SLGILLYDMVCGDIPF 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 100 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 152
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 198
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 199 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 254
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 100 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 152
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 198
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 199 SLGILLYDMVCGDIPF 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 99 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 151
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 152 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 197
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 198 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 253
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 99 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 151
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 152 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 197
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 198 SLGILLYDMVCGDIPF 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 200 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 255
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 200 SLGILLYDMVCGDIPF 215
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 215 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 270
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 215 SLGILLYDMVCGDIPF 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 200 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 255
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 200 SLGILLYDMVCGDIPF 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 148
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 250
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 148
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 195 SLGILLYDMVCGDIPF 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG + + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLARVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATVCQLYLWAP 1113
P E ++ + P
Sbjct: 295 PKFEQIVSILDKLIRNP 311
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG + + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLARVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 20/181 (11%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 982
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1042
+ DF LS Q + L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADF--------SLSQQSVHSVSGLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1043 GTVAYEIFGHDNPFYQSARNTDYEVNAL------PQLNTNVPEVMRRLVAKLLENDPSDR 1096
+ Y I + PF + + +N + P + + P +R ++ DP R
Sbjct: 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 1097 P 1097
P
Sbjct: 275 P 275
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 14/134 (10%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCP 1503
DL + L ++ + ++ L + G+ ++ HRDL+S NI L ++N
Sbjct: 107 DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1563
+ DF LS Q + L GN MAPE A ++ K+D ++
Sbjct: 167 CAKVADF--------SLSQQSVHSVSGLLGNFQWMAPETIGAEEESYT----EKADTYSF 214
Query: 1564 GTVAYEIFGHDNPF 1577
+ Y I + PF
Sbjct: 215 AMILYTILTGEGPF 228
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 990 G-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G ++ G + +L G +APEV F D W+ G + Y
Sbjct: 187 GLATKIEFDGERKK------DLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS-AEL 1101
+ PF S Y + + +VP V L+ ++L DP+ RPS AEL
Sbjct: 235 LLVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAEL 290
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 1511 G-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G ++ G + +L G +APEV F D W+ G + Y
Sbjct: 187 GLATKIEFDGERKK------DLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1570 IFGHDNPFYQSARNTDY 1586
+ PF S Y
Sbjct: 235 LLVGKPPFETSCLKETY 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 915 LFILMK-KYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+M+ D +LR A+L + + + G+ +L HRDL + N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
+E N L I+DFG S G+ Y+++ GG L V P ++
Sbjct: 247 --TEKNV---LKISDFGMSREEADGV---YAAS----GG---LRQVPVKWTAPEALNYGR 291
Query: 1034 Y-SKSDAWTAGTVAYEIFG-----HDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAK 1087
Y S+SD W+ G + +E F + N Q R + LP P+ + RL+ +
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLMEQ 350
Query: 1088 LLENDPSDRPS 1098
+P RPS
Sbjct: 351 CWAYEPGQRPS 361
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 1436 LFILMK-KYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+M+ D +LR A+L + + + G+ +L HRDL + N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
+E N L I+DFG S G+ Y+++ GG L V P ++
Sbjct: 247 --TEKNV---LKISDFGMSREEADGV---YAAS----GG---LRQVPVKWTAPEALNYGR 291
Query: 1555 Y-SKSDAWTAGTVAYEIF 1571
Y S+SD W+ G + +E F
Sbjct: 292 YSSESDVWSFGILLWETF 309
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 135 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 187
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 188 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 233
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 234 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 289
Score = 41.2 bits (95), Expect = 0.006, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 135 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 187
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 188 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 233
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 234 SLGILLYDMVCGDIPF 249
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRG---- 148
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 250
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 96 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRG---- 148
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 194
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 195 SLGILLYDMVCGDIPF 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 82 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 140
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D + + I DFG S G ++ S G+ APEV + L++
Sbjct: 141 DEHLN-----VKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 185
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF 1056
+ D W+ G + Y + PF
Sbjct: 186 -PEVDVWSCGVILYVMLCRRLPF 207
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 82 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 140
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D + + I DFG S G ++ S G+ APEV + L++
Sbjct: 141 DEHLN-----VKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 185
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+ G + Y + PF
Sbjct: 186 -PEVDVWSCGVILYVMLCRRLPF 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 116 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 170
Query: 990 GSSYTNKSGLSMQYSSA-DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + +++ +L G +APEV F D W+ G + Y
Sbjct: 171 GLA------TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 218
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS-AEL 1101
+ PF S Y + + +VP V L+ ++L DP+ RPS AEL
Sbjct: 219 LLVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAEL 274
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 116 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 170
Query: 1511 GSSYTNKSGLSMQYSSA-DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + +++ +L G +APEV F D W+ G + Y
Sbjct: 171 GLA------TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 218
Query: 1570 IFGHDNPFYQSARNTDY 1586
+ PF S Y
Sbjct: 219 LLVGKPPFETSCLKETY 235
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 87 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D + I DFG S G ++ S G+ APEV + L++
Sbjct: 146 D-----EHLNVKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 190
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF 1056
+ D W+ G + Y + PF
Sbjct: 191 -PEVDVWSCGVILYVMLCRRLPF 212
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 87 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D + I DFG S G ++ S G+ APEV + L++
Sbjct: 146 D-----EHLNVKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 190
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+ G + Y + PF
Sbjct: 191 -PEVDVWSCGVILYVMLCRRLPF 212
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With Inhibitor
(2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 200 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 255
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 101 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 153
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 199
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 200 SLGILLYDMVCGDIPF 215
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 115 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 167
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 213
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V ++++ ++R +A PSDRP+ E
Sbjct: 214 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLAL----RPSDRPTFE 269
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 115 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 167
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 213
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 214 SLGILLYDMVCGDIPF 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 98/257 (38%), Gaps = 55/257 (21%)
Query: 849 NALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGG 908
N + Y+ R D+ M+ ++ HP V ++F F D D L + +
Sbjct: 77 NKVPYVTRERDV-MSRLD----HPFFVKLYFTFQD------DEKLYFGLS---------- 115
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y +N L ++K + E C + E ++ + +L+ HRDLK
Sbjct: 116 YAKNGELLKYIRKIGS-----FDETCTRFYTAE-------IVSALEYLHGKGIIHRDLKP 163
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPG 1027
+NILL N + ITDFG++ LS + A G ++PE+
Sbjct: 164 ENILL-----NEDMHIQITDFGTAKV----LSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVM----RR 1083
S SD W G + Y++ PF A N + +L + P R
Sbjct: 215 CKS------SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPAAFFPKARD 266
Query: 1084 LVAKLLENDPSDRPSAE 1100
LV KLL D + R E
Sbjct: 267 LVEKLLVLDATKRLGCE 283
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 44/187 (23%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HP V ++F F D D L + + Y +N L ++K +
Sbjct: 94 HPFFVKLYFTFQD------DEKLYFGLS----------YAKNGELLKYIRKIGS-----F 132
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
E C + E ++ + +L+ HRDLK +NILL N + ITDFG
Sbjct: 133 DETCTRFYTAE-------IVSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFG 180
Query: 1512 SSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
++ LS + A G ++PE+ S SD W G + Y++
Sbjct: 181 TAKV----LSPESKQARANXFVGTAQYVSPELLTEKSACKS------SDLWALGCIIYQL 230
Query: 1571 FGHDNPF 1577
PF
Sbjct: 231 VAGLPPF 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 88 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 146
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
D + I DFG S G ++ S G+ APEV + L++
Sbjct: 147 D-----EHLNVKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 191
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF 1056
+ D W+ G + Y + PF
Sbjct: 192 -PEVDVWSCGVILYVMLCRRLPF 213
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+ ++++ +L +Y+ +R ++S E F Q++ V + + H+ HRDLK +N+LL
Sbjct: 88 EIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 146
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
D + I DFG S G ++ S G+ APEV + L++
Sbjct: 147 D-----EHLNVKIADFGLSNIMTDGNFLKTSC------GSPNYAAPEV--ISGKLYAG-- 191
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+ G + Y + PF
Sbjct: 192 -PEVDVWSCGVILYVMLCRRLPF 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
LR++L+ A+L +L +Q+ +G+ +L R HRDL + NIL++ +
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE-----AHVK 151
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPGLFSFVNYSKSDAWTAG 1043
I DFG + L + + G + APE + +FS +SD W+ G
Sbjct: 152 IADFGLAKL----LPLDKDXXVVREPGQSPIFWYAPES--LSDNIFS----RQSDVWSFG 201
Query: 1044 TVAYEIFGH 1052
V YE+F +
Sbjct: 202 VVLYELFTY 210
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
LR++L+ A+L +L +Q+ +G+ +L R HRDL + NIL++ +
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE-----AHVK 151
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPGLFSFVNYSKSDAWTAG 1564
I DFG + L + + G + APE + +FS +SD W+ G
Sbjct: 152 IADFGLAKL----LPLDKDXXVVREPGQSPIFWYAPES--LSDNIFS----RQSDVWSFG 201
Query: 1565 TVAYEIFGH 1573
V YE+F +
Sbjct: 202 VVLYELFTY 210
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
DL +Y+ E+ L F Q++ + H + HRD+K +NIL+D C +L
Sbjct: 125 DLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG--CAKL 181
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--WTA 1042
+ DFGS ++ + + G PE S Y A W+
Sbjct: 182 I--DFGSG-------ALLHDEPYTDFDGTRVYSPPE-------WISRHQYHALPATVWSL 225
Query: 1043 GTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
G + Y++ D PF + + E++ ++ + ++RR +A PS RPS E
Sbjct: 226 GILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAP----KPSSRPSLE 279
Score = 35.8 bits (81), Expect = 0.20, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
DL +Y+ E+ L F Q++ + H + HRD+K +NIL+D C +L
Sbjct: 125 DLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG--CAKL 181
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--WTA 1563
+ DFGS ++ + + G PE S Y A W+
Sbjct: 182 I--DFGSG-------ALLHDEPYTDFDGTRVYSPPE-------WISRHQYHALPATVWSL 225
Query: 1564 GTVAYEIFGHDNPF 1577
G + Y++ D PF
Sbjct: 226 GILLYDMVCGDIPF 239
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ ++L+G+ +L+ R HRD+K+ N+LL D + + DF G++ Q +
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGD-----VKLADF--------GVAGQLT 167
Query: 1005 SADIELG---GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
I+ G MAPEV + F K+D W+ G A E+ + P
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSAYDF------KADIWSLGITAIELAKGEPP------ 215
Query: 1062 NTDYE---------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
N+D N+ P L + + V L DP RP+A+
Sbjct: 216 NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAK 263
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ ++L+G+ +L+ R HRD+K+ N+LL D + + DF G++ Q +
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGD-----VKLADF--------GVAGQLT 167
Query: 1526 SADIELG---GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
I+ G MAPEV + F K+D W+ G A E+ + P
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSAYDF------KADIWSLGITAIELAKGEPP 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 21/197 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + D ++R
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNR 294
Query: 1097 PSAELAATVCQLYLWAP 1113
P E ++ + P
Sbjct: 295 PKFEQIVSILDKLIRNP 311
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ AQ ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-----NSNL 184
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG + Y++ GG + + +P ++ + S SD W+
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTR----GGKIP-----IRWTSPEAIAYRKFTSASDVWS 235
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V H + HR+LK +N+LL +L DFG + + + A
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL--ADFGLAIEVEGEQQAWFGFA- 174
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF--------YQ 1058
G ++PEV P Y K D W G + Y + PF YQ
Sbjct: 175 ----GTPGYLSPEVLRKDP-------YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ 223
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ Y+ + P+ +T PE + L+ K+L +PS R +A
Sbjct: 224 QIKAGAYDFPS-PEWDTVTPEA-KDLINKMLTINPSKRITA 262
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 71/195 (36%), Gaps = 51/195 (26%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V H + HR+LK +N+LL +L DFG + + + A
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL--ADFGLAIEVEGEQQAWFGFA- 174
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
G ++PEV P Y K D W G + Y + PF+ +
Sbjct: 175 ----GTPGYLSPEVLRKDP-------YGKPVDLWACGVILYILLVGYPPFWDEDQ----- 218
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
HR YQ + Y+ + P+ +T PE + L
Sbjct: 219 HR-----------------------------LYQQIKAGAYDFPS-PEWDTVTPEA-KDL 247
Query: 1648 VAKLLENDPSDRPSA 1662
+ K+L +PS R +A
Sbjct: 248 INKMLTINPSKRITA 262
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent Kinase
6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 59/225 (26%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 968
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1024
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARIY--SFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALP-------- 1071
TP D W+ G + E+F P ++ + + D +V LP
Sbjct: 198 TP----------VDLWSVGCIFAEMF-RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 1072 -----------------QLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ T++ E+ + L+ K L +P+ R SA
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 1489
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1545
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARIY--SFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
TP D W+ G + E+F P ++ + + D
Sbjct: 198 TP----------VDLWSVGCIFAEMF-RRKPLFRGSSDVD 226
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 915 LFILMKKY--NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
L +++ +Y N L +LR Q ++ + + + + G+ +L+ HRDL + N+L
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 973 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPE-VALATPGLF 1029
+D + C ++DFG S L +A GG + + APE +A T F
Sbjct: 184 VDS--NLVCK---VSDFGLSRV----LEDDPDAAXTTTGGKIPIRWTAPEAIAFRT---F 231
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRL 1084
S S SD W+ G V +E+ + Y + N D E LP P + +L
Sbjct: 232 S----SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQL 286
Query: 1085 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPS 1123
+ D + RP +V + +P+ AT S
Sbjct: 287 MLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATVS 325
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 1436 LFILMKKY--NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
L +++ +Y N L +LR Q ++ + + + + G+ +L+ HRDL + N+L
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL 183
Query: 1494 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPE-VALATPGLF 1550
+D + C ++DFG S L +A GG + + APE +A T F
Sbjct: 184 VDS--NLVCK---VSDFGLSRV----LEDDPDAAXTTTGGKIPIRWTAPEAIAFRT---F 231
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
S S SD W+ G V +E+ + Y + N D
Sbjct: 232 S----SASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ + +L+ HRD+KSD+ILL ++ ++DFG + +
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLD-----GRVKLSDFGFCAQISKDVPKRKX---- 200
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN 1068
L G MAPEV + L++ ++ D W+ G + E+ + P++ +D V
Sbjct: 201 -LVGTPYWMAPEV--ISRSLYA----TEVDIWSLGIMVIEMVDGEPPYF-----SDSPVQ 248
Query: 1069 ALPQLNTNVP----------EVMRRLVAKLLENDPSDRPSAE 1100
A+ +L + P V+R + ++L DP +R +A+
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQ 290
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 1470 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1529
+L+ + +L+ HRD+KSD+ILL ++ ++DFG + +
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLD-----GRVKLSDFGFCAQISKDVPKRKX---- 200
Query: 1530 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
L G MAPEV + L++ ++ D W+ G + E+ + P++ +
Sbjct: 201 -LVGTPYWMAPEV--ISRSLYA----TEVDIWSLGIMVIEMVDGEPPYFSDS 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 215 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 247
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 162 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 215 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 247
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 162 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 180
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 180
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + +++ + L G +APEV F D W+ G + Y
Sbjct: 187 GLA------TKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS-AEL 1101
+ PF S Y + + +VP V L+ ++L DP+ RPS AEL
Sbjct: 235 LLVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAEL 290
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + +++ + L G +APEV F D W+ G + Y
Sbjct: 187 GLA------TKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1570 IFGHDNPFYQSARNTDY 1586
+ PF S Y
Sbjct: 235 LLVGKPPFETSCLKETY 251
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 162 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 215 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 247
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 162 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 180
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 180
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 990 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
G + +++ + L G +APEV F D W+ G + Y
Sbjct: 187 GLA------TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNTNVPE----VMRRLVAKLLENDPSDRPS-AEL 1101
+ PF S Y + + +VP V L+ ++L DP+ RPS AEL
Sbjct: 235 LLVGKPPFETSCLKETY--IRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAEL 290
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L +R ++ E Q ++GV +L+ +R HRDLK N+ L+ D + I DF
Sbjct: 132 LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-----VKIGDF 186
Query: 1511 GSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
G + +++ + L G +APEV F D W+ G + Y
Sbjct: 187 GLA------TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV------DIWSLGCILYT 234
Query: 1570 IFGHDNPFYQSARNTDY 1586
+ PF S Y
Sbjct: 235 LLVGKPPFETSCLKETY 251
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 164
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 165 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 217
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 218 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 250
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 164
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 165 MKTFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 209
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 137 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 183
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 184 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 239
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 240 AGLLKKDPKQR 250
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 137 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKTFCGTPEYLAPEVLEDN---- 183
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 184 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 239
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 240 AGLLKKDPKQR 250
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR+ Q ++ + + + + G+ +L HR L + NIL+ N+
Sbjct: 92 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILV-----NSNL 146
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1040
++DFG S + Y+SA LGG + + P + + S SD W
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVW 198
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL-----NTNVPEVMRRLVAKLLENDPSD 1095
+ G V +E+ + Y N D +NA+ Q + P + +L+ + D +
Sbjct: 199 SYGIVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNH 257
Query: 1096 RP 1097
RP
Sbjct: 258 RP 259
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 15/144 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR+ Q ++ + + + + G+ +L HR L + NIL+ N+
Sbjct: 92 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILV-----NSNL 146
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1561
++DFG S + Y+SA LGG + + P + + S SD W
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVW 198
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
+ G V +E+ + Y N D
Sbjct: 199 SYGIVMWEVMSYGERPYWDMTNQD 222
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 221 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 278
++DFG S + Y+SA LGG + + P + + S SD W+ G
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVWSYG 201
Query: 279 TVAYEIFGHDNPFYQSARNTDYEVNALPQL-----NTNVPEVMRRLVAKLLENDPSDRP 332
V +E+ + Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 202 IVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 259
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 662 ITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAG 719
++DFG S + Y+SA LGG + + P + + S SD W+ G
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSA---LGGKIP-----IRWTAPEAIQYRKFTSASDVWSYG 201
Query: 720 TVAYEIFGHDNPFYQSARNTDYEVNALPQL-----NTNVPEVMRRLVAKLLENDPSDRP 773
V +E+ + Y N D +NA+ Q + P + +L+ + D + RP
Sbjct: 202 IVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRP 259
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 34/189 (17%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
++I+M+ + +L ++ HER+ L Q+L G+ HL+ HRDLK NI+
Sbjct: 103 DVYIVMELMDANLSQVIQMELD----HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 973 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLF 1029
+ D T L I DFG + T G +M P V P +
Sbjct: 159 VKS--DAT---LKILDFGLART----------------AGTSFMMTPYVVTRYYRAPEVI 197
Query: 1030 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL---V 1085
+ Y ++ D W+ G + E+ + + D + QL T PE M++L V
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTV 256
Query: 1086 AKLLENDPS 1094
+EN P
Sbjct: 257 RTYVENRPK 265
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
++I+M+ + +L ++ HER+ L Q+L G+ HL+ HRDLK NI+
Sbjct: 103 DVYIVMELMDANLSQVIQMELD----HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 1494 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA---LATPGLF 1550
+ D T L I DFG + T G +M P V P +
Sbjct: 159 VKS--DAT---LKILDFGLART----------------AGTSFMMTPYVVTRYYRAPEVI 197
Query: 1551 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHR 1589
+ Y ++ D W+ G + E+ + + D W++
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNK 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 994
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1052
SG + G APE+ + L + ++S D ++ G V Y I
Sbjct: 178 LDSG-QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 1053 DNPF---YQSARNTDYEVNALPQL----NTNVPEVMRRLVAKLLENDPSDRPSA 1099
+PF Y N + +L ++ + ++ L+++++++DP RP+A
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 1515
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 1516 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1573
SG + G APE+ + L + ++S D ++ G V Y I
Sbjct: 178 LDSG-QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 1574 DNPF 1577
+PF
Sbjct: 237 KHPF 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 915 LFILMK-KYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+M+ D +LR A+L + + + G+ +L HRDL + N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
+E N L I+DFG M AD + L V P ++
Sbjct: 247 --TEKNV---LKISDFG----------MSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 1034 Y-SKSDAWTAGTVAYEIFG-----HDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAK 1087
Y S+SD W+ G + +E F + N Q R + LP P+ + RL+ +
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLMEQ 350
Query: 1088 LLENDPSDRPS 1098
+P RPS
Sbjct: 351 CWAYEPGQRPS 361
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Query: 1436 LFILMK-KYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+M+ D +LR A+L + + + G+ +L HRDL + N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
+E N L I+DFG M AD + L V P ++
Sbjct: 247 --TEKNV---LKISDFG----------MSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 1555 Y-SKSDAWTAGTVAYEIF 1571
Y S+SD W+ G + +E F
Sbjct: 292 YSSESDVWSFGILLWETF 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 37/168 (22%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ ++L+G+ +L+ + HRD+K+ N+LL D + + DF G++ Q +
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD-----VKLADF--------GVAGQLT 171
Query: 1005 SADIELG---GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
I+ G MAPEV + SK+D W+ G A E+ + P
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQS------AYDSKADIWSLGITAIELAKGEPP------ 219
Query: 1062 NTDYE---------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
N+D N P L + + + + L DPS RP+A+
Sbjct: 220 NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAK 267
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ ++L+G+ +L+ + HRD+K+ N+LL D + + DF G++ Q +
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD-----VKLADF--------GVAGQLT 171
Query: 1526 SADIELG---GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
I+ G MAPEV + SK+D W+ G A E+ + P
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQS------AYDSKADIWSLGITAIELAKGEPP 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 215 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 247
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 215 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 247
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 161
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 162 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 206
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 134 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 180
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 181 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 236
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 237 AGLLKKDPKQR 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
Y R IL +L L++ C + +L + + + + + HRD+K
Sbjct: 93 YDRRRIYLILEYAPRGELYKELQKSCT-FDEQRTATIMEELADALMYCHGKKVIHRDIKP 151
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+LL + I DFG S S++ + + G + + PE+ +
Sbjct: 152 ENLLLGLKGELK-----IADFGWSV---HAPSLRRKT----MCGTLDYLPPEM------I 193
Query: 1029 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVA 1086
++ K D W G + YE+ + PF ++ N Y V + +VP + L++
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLIS 253
Query: 1087 KLLENDPSDR-PSAELAA 1103
KLL ++PS+R P A+++A
Sbjct: 254 KLLRHNPSERLPLAQVSA 271
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 270 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLEND 327
K D W G + YE+ + PF ++ N Y V + +VP + L++KLL ++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 328 PSDR-PSAELAA 338
PS+R P A+++A
Sbjct: 260 PSERLPLAQVSA 271
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 711 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLEND 768
K D W G + YE+ + PF ++ N Y V + +VP + L++KLL ++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 769 PSDR-PSAELAA 779
PS+R P A+++A
Sbjct: 260 PSERLPLAQVSA 271
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 19/157 (12%)
Query: 1430 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
Y R IL +L L++ C + +L + + + + + HRD+K
Sbjct: 93 YDRRRIYLILEYAPRGELYKELQKSCT-FDEQRTATIMEELADALMYCHGKKVIHRDIKP 151
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+LL + I DFG S S++ + + G + + PE+ +
Sbjct: 152 ENLLLGLKGELK-----IADFGWSV---HAPSLRRKT----MCGTLDYLPPEM------I 193
Query: 1550 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
++ K D W G + YE+ + PF ++ N Y
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETY 230
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1606 STVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDR-PSA 1662
+ YE+ + PF ++ N Y V + +VP + L++KLL ++PS+R P A
Sbjct: 208 GVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLA 267
Query: 1663 ELAA 1666
+++A
Sbjct: 268 QVSA 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 215 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 270
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 215 SLGILLYDMVCGDIPF 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 123 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 175
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 176 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 221
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 222 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 277
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 123 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 175
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 176 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 221
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 222 SLGILLYDMVCGDIPF 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DAT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGG 222
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ + D + QL T PE M++L V +EN P
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DAT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1575
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGG 222
Query: 1576 PFYQSARNTDYWHR 1589
+ + D W++
Sbjct: 223 VLFPGTDHIDQWNK 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + L+ R HRDLK+ N+L+ D + + DFG S N L + S
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGD-----IRLADFGVSAKNLKTLQKRDS--- 176
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
G MAPEV + + +Y K+D W+ G E+ + P ++
Sbjct: 177 --FIGTPYWMAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHE 224
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + L+ R HRDLK+ N+L+ D + + DFG S N L + S
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGD-----IRLADFGVSAKNLKTLQKRDS--- 176
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
G MAPEV + + +Y K+D W+ G E+ + P ++
Sbjct: 177 --FIGTPYWMAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHE 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 968
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1024
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARIY--SFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
TP D W+ G + E+F P ++ + + D
Sbjct: 198 TP----------VDLWSVGCIFAEMF-RRKPLFRGSSDVD 226
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 1489
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1545
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARIY--SFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
TP D W+ G + E+F P ++ + + D
Sbjct: 198 TP----------VDLWSVGCIFAEMF-RRKPLFRGSSDVD 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 166
Query: 1008 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
++ G +APEV +Y ++ D W G V YE+ PFY +
Sbjct: 167 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 219
Query: 1066 EVNALPQL---NTNVPEVMRRLVAKLLENDPSDR 1096
E+ + ++ T PE + L+A LL+ DP R
Sbjct: 220 ELILMEEIRFPRTLSPEA-KSLLAGLLKKDPKQR 252
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++ + +L+ +RD+K +N++LD + ITDFG K G+S A
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKD-----GHIKITDFGLC---KEGIS---DGAT 166
Query: 1529 IE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
++ G +APEV +Y ++ D W G V YE+ PFY
Sbjct: 167 MKXFCGTPEYLAPEVLEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 211
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 139 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 185
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 186 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 241
Query: 321 AKLLENDPSDR 331
A LL+ DP R
Sbjct: 242 AGLLKKDPKQR 252
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE-LGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G+S A ++ G +APEV
Sbjct: 139 ENLMLDKDG---HIKITDFGLC---KEGIS---DGATMKXFCGTPEYLAPEVLEDN---- 185
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 186 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA-KSLL 241
Query: 762 AKLLENDPSDR 772
A LL+ DP R
Sbjct: 242 AGLLKKDPKQR 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + L+ R HRDLK+ N+L+ D + + DFG S N L + S
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGD-----IRLADFGVSAKNLKTLQKRDS--- 168
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
G MAPEV + + +Y K+D W+ G E+ + P ++
Sbjct: 169 --FIGTPYWMAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHE 216
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + L+ R HRDLK+ N+L+ D + + DFG S N L + S
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGD-----IRLADFGVSAKNLKTLQKRDS--- 168
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
G MAPEV + + +Y K+D W+ G E+ + P ++
Sbjct: 169 --FIGTPYWMAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHE 216
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 160 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 207
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 208 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 267
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 268 PKAEMRPSFSELVSRISAIF 287
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 160 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 207
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 208 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 968
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1024
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARI--YSFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
TP D W+ G + E+F P ++ + + D
Sbjct: 198 TP----------VDLWSVGCIFAEMFRR-KPLFRGSSDVD 226
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERI--LLFTQLLEGVTHLNMHRTAHRDLKS 1489
R L ++ + + DL YL + E I ++F QLL G+ L+ HR HRDLK
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLRGLDFLHSHRVVHRDLKP 148
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL----A 1545
NIL+ S Q+ + DFG + M +S + L APEV L A
Sbjct: 149 QNILVTSS-----GQIKLADFGLARI--YSFQMALTSVVVTLW----YRAPEVLLQSSYA 197
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
TP D W+ G + E+F P ++ + + D
Sbjct: 198 TP----------VDLWSVGCIFAEMFRR-KPLFRGSSDVD 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 115 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 167
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 213
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A PSDRP+ E
Sbjct: 214 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPSDRPTFE 269
Score = 41.2 bits (95), Expect = 0.006, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 115 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 167
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 213
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 214 SLGILLYDMVCGDIPF 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1021
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 132 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 180
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNV 1077
+Y ++ D W G V YE+ PFY +E+ + ++ T
Sbjct: 181 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 233
Query: 1078 PEVMRRLVAKLLENDPSDR--PSAELAATVCQLYLWAPKHW 1116
PE + L++ LL+ DP R +E A + Q +A W
Sbjct: 234 PEA-KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Score = 37.0 bits (84), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 138 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 184
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 185 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 240
Query: 321 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 351
+ LL+ DP R +E A + Q +A W
Sbjct: 241 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Score = 37.0 bits (84), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 138 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 184
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 185 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 240
Query: 762 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 792
+ LL+ DP R +E A + Q +A W
Sbjct: 241 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1542
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 132 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 180
Query: 1543 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+Y ++ D W G V YE+ PFY
Sbjct: 181 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 192
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 192
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DAT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ + D + QL T PE M++L V +EN P
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DAT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1575
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1576 PFYQSARNTDYWHR 1589
+ + D W++
Sbjct: 223 VLFPGTDHIDQWNK 236
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 90 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 147
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 148 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 196
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 197 KFSVA----SDVWSFGVVLYELF 215
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 90 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 147
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 148 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 196
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 197 KFSVA----SDVWSFGVVLYELF 215
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 79/210 (37%), Gaps = 45/210 (21%)
Query: 1483 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI---EL---GGNVA 1536
AHRDLK +NIL C N + I DFG SG+ + + I EL G+
Sbjct: 133 AHRDLKPENIL--CEHPNQVSPVKICDFGLG----SGIKLNGDCSPISTPELLTPCGSAE 186
Query: 1537 LMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHL 1596
MAPEV A S + + D W+ G + Y + PF + W R
Sbjct: 187 YMAPEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR------- 238
Query: 1597 VYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLN-TNVPEVMRRLVAKLLEND 1655
P+ N ++S + YE P + ++ + L++KLL D
Sbjct: 239 ----GEACPAC--------QNMLFESIQEGKYE---FPDKDWAHISCAAKDLISKLLVRD 283
Query: 1656 PSDRPSAELAATVCQLYLWAPKHWLYGATP 1685
R S AA V Q W+ G P
Sbjct: 284 AKQRLS---AAQVLQ------HPWVQGCAP 304
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 49/191 (25%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI---EL---GGNVA 1015
AHRDLK +NIL C N + I DFG SG+ + + I EL G+
Sbjct: 133 AHRDLKPENIL--CEHPNQVSPVKICDFGLG----SGIKLNGDCSPISTPELLTPCGSAE 186
Query: 1016 LMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF------------------- 1056
MAPEV A S + + D W+ G + Y + PF
Sbjct: 187 YMAPEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 1057 ----YQSARNTDYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLW 1111
++S + YE P + ++ + L++KLL D R S AA V Q
Sbjct: 246 QNMLFESIQEGKYE---FPDKDWAHISCAAKDLISKLLVRDAKQRLS---AAQVLQ---- 295
Query: 1112 APKHWLYGATP 1122
W+ G P
Sbjct: 296 --HPWVQGCAP 304
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 117 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 174
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 175 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 223
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 224 KFSVA----SDVWSFGVVLYELF 242
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 117 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 174
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 175 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 223
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 224 KFSVA----SDVWSFGVVLYELF 242
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDAT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ + D + QL T PE M++L V +EN P
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDAT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1575
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1576 PFYQSARNTDYWHR 1589
+ + D W++
Sbjct: 223 VLFPGTDHIDQWNK 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 908 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 83 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 141
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
+ NIL++ + I DFG L Y + APE +
Sbjct: 142 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 192
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIFGH 1052
+FS +SD W+ G V YE+F +
Sbjct: 193 NIFS----RQSDVWSFGVVLYELFTY 214
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 1429 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 83 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 141
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
+ NIL++ + I DFG L Y + APE +
Sbjct: 142 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 192
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIFGH 1573
+FS +SD W+ G V YE+F +
Sbjct: 193 NIFS----RQSDVWSFGVVLYELFTY 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 85 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 142
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 143 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 191
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 192 KFSVA----SDVWSFGVVLYELF 210
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 85 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 142
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 143 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 191
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 192 KFSVA----SDVWSFGVVLYELF 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 91 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 148
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 149 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 197
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 198 KFSVA----SDVWSFGVVLYELF 216
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 91 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 148
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 149 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 197
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 198 KFSVA----SDVWSFGVVLYELF 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 92 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 149
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 150 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 198
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 199 KFSVA----SDVWSFGVVLYELF 217
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 92 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 149
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 150 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 198
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 199 KFSVA----SDVWSFGVVLYELF 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL+ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEYLPYGS-LRDYLQAHAERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL+ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEYLPYGS-LRDYLQAHAERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 908 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 95 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 153
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
+ NIL++ + I DFG L Y + APE +
Sbjct: 154 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 204
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIFGH 1052
+FS +SD W+ G V YE+F +
Sbjct: 205 NIFS----RQSDVWSFGVVLYELFTY 226
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 1429 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 95 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 153
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
+ NIL++ + I DFG L Y + APE +
Sbjct: 154 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 204
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIFGH 1573
+FS +SD W+ G V YE+F +
Sbjct: 205 NIFS----RQSDVWSFGVVLYELFTY 226
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 163 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 210
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 211 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 270
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 271 PKAEMRPSFSELVSRISAIF 290
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 163 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 210
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 211 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 187 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 234
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 235 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 294
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 295 PKAEMRPSFSELVSRISAIF 314
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 187 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 234
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 235 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1021
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 134 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 182
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNV 1077
+Y ++ D W G V YE+ PFY +E+ + ++ T
Sbjct: 183 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 235
Query: 1078 PEVMRRLVAKLLENDPSDR--PSAELAATVCQLYLWAPKHW 1116
PE + L++ LL+ DP R +E A + Q +A W
Sbjct: 236 PEA-KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 140 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 186
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 187 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 242
Query: 321 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 351
+ LL+ DP R +E A + Q +A W
Sbjct: 243 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 140 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 186
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 187 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 242
Query: 762 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 792
+ LL+ DP R +E A + Q +A W
Sbjct: 243 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1542
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 134 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 182
Query: 1543 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+Y ++ D W G V YE+ PFY
Sbjct: 183 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 84 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 141
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 142 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 190
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 191 KFSVA----SDVWSFGVVLYELF 209
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 84 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 141
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 142 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 190
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 191 KFSVA----SDVWSFGVVLYELF 209
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 167 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 214
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 274
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 275 PKAEMRPSFSELVSRISAIF 294
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 167 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 214
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1021
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 133 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 181
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNV 1077
+Y ++ D W G V YE+ PFY +E+ + ++ T
Sbjct: 182 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 234
Query: 1078 PEVMRRLVAKLLENDPSDR--PSAELAATVCQLYLWAPKHW 1116
PE + L++ LL+ DP R +E A + Q +A W
Sbjct: 235 PEA-KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 139 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 185
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 186 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 241
Query: 321 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 351
+ LL+ DP R +E A + Q +A W
Sbjct: 242 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 139 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEVLEDN---- 185
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 186 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 241
Query: 762 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 792
+ LL+ DP R +E A + Q +A W
Sbjct: 242 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1542
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 133 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------XFCGTPEYLAPEV 181
Query: 1543 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+Y ++ D W G V YE+ PFY
Sbjct: 182 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 192
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 192
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 908 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 82 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 140
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
+ NIL++ + I DFG L Y + APE +
Sbjct: 141 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 191
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIFGH 1052
+FS +SD W+ G V YE+F +
Sbjct: 192 NIFS----RQSDVWSFGVVLYELFTY 213
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 1429 GYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G GR SL ++M+ + LR++L+ A+L +L +Q+ +G+ +L R HRDL
Sbjct: 82 GPGRQ-SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL 140
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
+ NIL++ + I DFG L Y + APE +
Sbjct: 141 AARNILVESE-----AHVKIADFG--LAKLLPLDKDYYVVREPGQSPIFWYAPES--LSD 191
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIFGH 1573
+FS +SD W+ G V YE+F +
Sbjct: 192 NIFS----RQSDVWSFGVVLYELFTY 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 93 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 150
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 151 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 199
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 200 KFSVA----SDVWSFGVVLYELF 218
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 93 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 150
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 151 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 199
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 200 KFSVA----SDVWSFGVVLYELF 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 37/183 (20%)
Query: 925 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
+L +Y+ E+ +++ E F Q++ + + + H+ HRDLK +N+LLD DN +
Sbjct: 94 ELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNL--NV 147
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA----LATPGLFSFVNYSKSDAW 1040
I DFG S G ++ S G+ APEV A P + D W
Sbjct: 148 KIADFGLSNIMTDGNFLKTSC------GSPNYAAPEVINGKLYAGP---------EVDVW 192
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNV---PEVM----RRLVAKLLENDP 1093
+ G V Y + PF + ++ N ++N+ V P+ + + L+ +++ DP
Sbjct: 193 SCGIVLYVMLVGRLPF-----DDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADP 247
Query: 1094 SDR 1096
R
Sbjct: 248 MQR 250
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
+L +Y+ E+ +++ E F Q++ + + + H+ HRDLK +N+LLD DN +
Sbjct: 94 ELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNL--NV 147
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA----LATPGLFSFVNYSKSDAW 1561
I DFG S G ++ S G+ APEV A P + D W
Sbjct: 148 KIADFGLSNIMTDGNFLKTSC------GSPNYAAPEVINGKLYAGP---------EVDVW 192
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G V Y + PF
Sbjct: 193 SCGIVLYVMLVGRLPF 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 83/218 (38%), Gaps = 45/218 (20%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
LR+YL C L+ ++LLF Q + EG+ +L+ HR L + N+LLD D +
Sbjct: 99 LRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD--NDRL---V 150
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
I DFG + G +Y + V APE L Y SD W+ G
Sbjct: 151 KIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKECKFYYASDVWSFGV 202
Query: 1566 VAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARN 1625
YE+ L Y S+ +P T E+ GH R
Sbjct: 203 TLYEL-------------------------LTYCDSNQSPHTKFTELIGHTQGQMTVLRL 237
Query: 1626 TDY--EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
T+ LP+ + P + L+ E + S RP+
Sbjct: 238 TELLERGERLPRPD-RCPCEIYHLMKNCWETEASFRPT 274
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 926 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
LR+YL C L+ ++LLF Q + EG+ +L+ HR L + N+LLD D +
Sbjct: 99 LRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD--NDRL---V 150
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
I DFG + G +Y + V APE L Y SD W+ G
Sbjct: 151 KIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKECKFYYASDVWSFGV 202
Query: 1045 VAYEIF 1050
YE+
Sbjct: 203 TLYELL 208
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 104 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 161
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 162 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 210
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 211 KFSVA----SDVWSFGVVLYELF 229
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 104 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 161
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 162 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 210
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 211 KFSVA----SDVWSFGVVLYELF 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 166 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 213
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 273
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 274 PKAEMRPSFSELVSRISAIF 293
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 166 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 213
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 104 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 161
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 162 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 210
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 211 KFSVA----SDVWSFGVVLYELF 229
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 104 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 161
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 162 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 210
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 211 KFSVA----SDVWSFGVVLYELF 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 83/218 (38%), Gaps = 45/218 (20%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
LR+YL C L+ ++LLF Q + EG+ +L+ HR L + N+LLD D +
Sbjct: 100 LRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD--NDRL---V 151
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
I DFG + G +Y + V APE L Y SD W+ G
Sbjct: 152 KIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKECKFYYASDVWSFGV 203
Query: 1566 VAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARN 1625
YE+ L Y S+ +P T E+ GH R
Sbjct: 204 TLYEL-------------------------LTYCDSNQSPHTKFTELIGHTQGQMTVLRL 238
Query: 1626 TDY--EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
T+ LP+ + P + L+ E + S RP+
Sbjct: 239 TELLERGERLPRPD-RCPCEIYHLMKNCWETEASFRPT 275
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 926 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
LR+YL C L+ ++LLF Q + EG+ +L+ HR L + N+LLD D +
Sbjct: 100 LRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLD--NDRL---V 151
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
I DFG + G +Y + V APE L Y SD W+ G
Sbjct: 152 KIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKECKFYYASDVWSFGV 203
Query: 1045 VAYEIF 1050
YE+
Sbjct: 204 TLYELL 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 165 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 212
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 213 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 273 PKAEMRPSFSELVSRISAIF 292
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 165 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 212
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 213 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 998
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDAT---LKILDFGLART---- 175
Query: 999 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1054
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1055 PFYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+ + D + QL T PE M++L V +EN P
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG 1519
HER+ L Q+L G+ HL+ HRDLK NI++ D T L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDAT---LKILDFGLART---- 175
Query: 1520 LSMQYSSADIELGGNVALMAPEVA---LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDN 1575
G +M P V P + + Y ++ D W+ G + E+
Sbjct: 176 ------------AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGG 222
Query: 1576 PFYQSARNTDYWHR 1589
+ + D W++
Sbjct: 223 VLFPGTDHIDQWNK 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 29/178 (16%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C LS L QLL G+ +++ HRDLK N+ +
Sbjct: 107 EVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DF GL+ Q AD E+ G VA APE+ L +
Sbjct: 165 -----NEDSELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML------N 202
Query: 1031 FVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAK 1087
+++Y+++ D W+ G + E+ + + D + + T PEV+ ++ ++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C LS L QLL G+ +++ HRDLK N+ +
Sbjct: 107 EVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DF GL+ Q AD E+ G VA APE+ L +
Sbjct: 165 -----NEDSELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML------N 202
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 33/180 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C LS L QLL G+ +++ HRDLK N+ +
Sbjct: 99 EVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 156
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DF GL+ Q AD E+ G VA APE+ L
Sbjct: 157 NEDC-------ELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML----- 193
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAK 1087
++++Y+++ D W+ G + E+ + + D + + T PEV+ ++ ++
Sbjct: 194 -NWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 251
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C LS L QLL G+ +++ HRDLK N+ +
Sbjct: 99 EVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 156
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DF GL+ Q AD E+ G VA APE+ L
Sbjct: 157 NEDC-------ELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML----- 193
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 194 -NWMHYNQTVDIWSVGCIMAELL 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 275
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 276 PKAEMRPSFSELVSRISAIF 295
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 275
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 276 PKAEMRPSFSELVSRISAIF 295
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEFLPYGS-LREYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 89 RNLKLIMEFLPYGS-LREYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 147 NILVENEN-----RVKIGDFGLTKV----LPQDKEXXKVKEPGESPIFWYAPES--LTES 195
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 196 KFSVA----SDVWSFGVVLYELF 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 261
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 262 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 299
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 261
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 262 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + L ++ S + G + P +A L +
Sbjct: 169 --EKFT---VKVADFGLA---RDMLDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 216
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 276
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 277 PKAEMRPSFSELVSRISAIF 296
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + L ++ S + G + P +A L +
Sbjct: 169 --EKFT---VKVADFGLA---RDMLDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 216
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 88 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 147
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
DL + N ++ +ED T + I DF G++ D G L+ P ++
Sbjct: 148 DLAARNCMV--AEDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMS 193
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEV 1080
L V + SD W+ G V +EI YQ N L N P++
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM 253
Query: 1081 MRRLVAKLLENDPSDRPS 1098
+ L+ + +P RPS
Sbjct: 254 LLELMRMCWQYNPKMRPS 271
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 88 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 147
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
DL + N ++ +ED T + I DF G++ D G L+ P ++
Sbjct: 148 DLAARNCMV--AEDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMS 193
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
L V + SD W+ G V +EI YQ N
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 231
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 926 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
LR+YL L+ ++LLF Q + EG+ +L+ HRDL + N+LLD +L
Sbjct: 122 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND------RL 172
Query: 985 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1043
V I DFG + G D + V APE L + Y SD W+ G
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGD--SPVFWYAPEC------LKEYKFYYASDVWSFG 224
Query: 1044 TVAYEIFGH 1052
YE+ H
Sbjct: 225 VTLYELLTH 233
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
LR+YL L+ ++LLF Q + EG+ +L+ HRDL + N+LLD +L
Sbjct: 122 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND------RL 172
Query: 1506 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1564
V I DFG + G D + V APE L + Y SD W+ G
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGD--SPVFWYAPEC------LKEYKFYYASDVWSFG 224
Query: 1565 TVAYEIFGH 1573
YE+ H
Sbjct: 225 VTLYELLTH 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 186 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 233
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 234 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 293
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 294 PKAEMRPSFSELVSRISAIF 313
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + +Y S + G + P +A L +
Sbjct: 186 --EKFT---VKVADFGLA---RDMYDKEYYSVHNKTGAKL----PVKWMALESLQTQKFT 233
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 234 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1021
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 275 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEV 323
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNV 1077
+Y ++ D W G V YE+ PFY +E+ + ++ T
Sbjct: 324 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 1078 PEVMRRLVAKLLENDPSDR--PSAELAATVCQLYLWAPKHW 1116
PE + L++ LL+ DP R +E A + Q +A W
Sbjct: 377 PEA-KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 281 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEVLEDN---- 327
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 328 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 383
Query: 321 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 351
+ LL+ DP R +E A + Q +A W
Sbjct: 384 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 281 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEVLEDN---- 327
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 328 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 383
Query: 762 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 792
+ LL+ DP R +E A + Q +A W
Sbjct: 384 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1542
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 275 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEV 323
Query: 1543 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+Y ++ D W G V YE+ PFY
Sbjct: 324 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 353
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 907 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1023
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 146 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 1024 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEV 1080
+ SK+D W+ G A E+ + P + + + N P L N +
Sbjct: 193 QS------AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 246
Query: 1081 MRRLVAKLLENDPSDRPSAE 1100
++ V L +PS RP+A+
Sbjct: 247 LKEFVEACLNKEPSFRPTAK 266
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 62/239 (25%)
Query: 1428 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1544
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 146 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 1545 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTT 1604
+ SK+D W+ G A E+ + P HS
Sbjct: 193 QS------AYDSKADIWSLGITAIELARGEPP-----------------------HSELH 223
Query: 1605 PSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P V + + +NP P L N + ++ V L +PS RP+A+
Sbjct: 224 PMKVLF-LIPKNNP---------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK 266
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + + + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA-RDINNIDXXKKTT 217
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ L V MAPE LF V +SD W+ G + +EIF
Sbjct: 218 NGRL--PVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + + + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA-RDINNIDXXKKTT 217
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ L V MAPE LF V +SD W+ G + +EIF
Sbjct: 218 NGRL--PVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 150
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 202
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 203 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 240
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 150
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 202
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 203 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1021
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 272 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEV 320
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNV 1077
+Y ++ D W G V YE+ PFY +E+ + ++ T
Sbjct: 321 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 1078 PEVMRRLVAKLLENDPSDR--PSAELAATVCQLYLWAPKHW 1116
PE + L++ LL+ DP R +E A + Q +A W
Sbjct: 374 PEA-KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 206 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 264
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 278 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEVLEDN---- 324
Query: 265 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 320
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 325 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 380
Query: 321 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 351
+ LL+ DP R +E A + Q +A W
Sbjct: 381 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 24/153 (15%)
Query: 647 SSLIYPKDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVALATPGLF 705
+L+ KD + ITDFG K G +M+ G +APEV
Sbjct: 278 ENLMLDKDG---HIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEVLEDN---- 324
Query: 706 SFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL---NTNVPEVMRRLV 761
+Y ++ D W G V YE+ PFY +E+ + ++ T PE + L+
Sbjct: 325 ---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA-KSLL 380
Query: 762 AKLLENDPSDR--PSAELAATVCQLYLWAPKHW 792
+ LL+ DP R +E A + Q +A W
Sbjct: 381 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEV 1542
+RDLK +N++LD + ITDFG K G +M+ G +APEV
Sbjct: 272 YRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMK------TFCGTPEYLAPEV 320
Query: 1543 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
+Y ++ D W G V YE+ PFY
Sbjct: 321 LEDN-------DYGRAVDWWGLGVVMYEMMCGRLPFY 350
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 907 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1023
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 131 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 1024 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEV 1080
+ SK+D W+ G A E+ + P + + + N P L N +
Sbjct: 178 QS------AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 1081 MRRLVAKLLENDPSDRPSAE 1100
++ V L +PS RP+A+
Sbjct: 232 LKEFVEACLNKEPSFRPTAK 251
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 62/239 (25%)
Query: 1428 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1544
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 131 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 1545 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTT 1604
+ SK+D W+ G A E+ + P HS
Sbjct: 178 QS------AYDSKADIWSLGITAIELARGEPP-----------------------HSELH 208
Query: 1605 PSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P V + + +NP P L N + ++ V L +PS RP+A+
Sbjct: 209 PMKVLF-LIPKNNP---------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK 251
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD + + + DFGS ++Q S A G ++PE+
Sbjct: 197 VHRDIKPDNVLLDVN-----GHIRLADFGSCLKMNDDGTVQSSVA----VGTPDYISPEI 247
Query: 1022 ALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQL 1073
A G+ + + D W+ G YE+ + PFY + Y E P
Sbjct: 248 LQAMEDGMGKYG--PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 305
Query: 1074 NTNVPEVMRRLVAKLL 1089
T+V E + L+ +L+
Sbjct: 306 VTDVSEEAKDLIQRLI 321
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 1483 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD + + + DFGS ++Q S A G ++PE+
Sbjct: 197 VHRDIKPDNVLLDVN-----GHIRLADFGSCLKMNDDGTVQSSVA----VGTPDYISPEI 247
Query: 1543 ALATP-GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
A G+ + + D W+ G YE+ + PFY +
Sbjct: 248 LQAMEDGMGKYG--PECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 907 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1023
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 131 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNTFVGTPFWMAPEVIK 177
Query: 1024 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEV 1080
+ SK+D W+ G A E+ + P + + + N P L N +
Sbjct: 178 QS------AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 1081 MRRLVAKLLENDPSDRPSAE 1100
++ V L +PS RP+A+
Sbjct: 232 LKEFVEACLNKEPSFRPTAK 251
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 62/239 (25%)
Query: 1428 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1544
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 131 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNTFVGTPFWMAPEVIK 177
Query: 1545 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTT 1604
+ SK+D W+ G A E+ + P HS
Sbjct: 178 QS------AYDSKADIWSLGITAIELARGEPP-----------------------HSELH 208
Query: 1605 PSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P V + + +NP P L N + ++ V L +PS RP+A+
Sbjct: 209 PMKVLF-LIPKNNP---------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK 251
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRER-------C--------AQLSMHERILLF 946
+N G ++ L+++++ +LR YL+ R C QLS + +
Sbjct: 82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 141
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + + + Y
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA---RDIHHIDYYKK 193
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF + +SD W+ G + +EIF
Sbjct: 194 TTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 231
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRER-------C--------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YL+ R C QLS + +
Sbjct: 82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 141
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + + + Y
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA---RDIHHIDYYKK 193
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF + +SD W+ G + +EIF
Sbjct: 194 TTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD + + + DFGS ++Q S A G ++PE+
Sbjct: 213 VHRDIKPDNVLLDVN-----GHIRLADFGSCLKMNDDGTVQSSVA----VGTPDYISPEI 263
Query: 1022 ALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQL 1073
A G+ + + D W+ G YE+ + PFY + Y E P
Sbjct: 264 LQAMEDGMGKYG--PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 321
Query: 1074 NTNVPEVMRRLVAKLL 1089
T+V E + L+ +L+
Sbjct: 322 VTDVSEEAKDLIQRLI 337
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 1483 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD + + + DFGS ++Q S A G ++PE+
Sbjct: 213 VHRDIKPDNVLLDVN-----GHIRLADFGSCLKMNDDGTVQSSVA----VGTPDYISPEI 263
Query: 1543 ALA-TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
A G+ + + D W+ G YE+ + PFY +
Sbjct: 264 LQAMEDGMGKYG--PECDWWSLGVCMYEMLYGETPFYAES 301
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCT 163
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + + + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA-RDINNIDXXKKTT 217
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ L V MAPE LF V +SD W+ G + +EIF
Sbjct: 218 NGRL--PVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCT 163
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + + + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA-RDINNIDXXKKTT 217
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ L V MAPE LF V +SD W+ G + +EIF
Sbjct: 218 NGRL--PVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
DL + N ++ +ED T + I DF G++ D G L+ P ++
Sbjct: 157 DLAARNCMV--AEDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMS 202
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEV 1080
L V + SD W+ G V +EI YQ N L N P++
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM 262
Query: 1081 MRRLVAKLLENDPSDRPS 1098
+ L+ + +P RPS
Sbjct: 263 LFELMRMCWQYNPKMRPS 280
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
DL + N ++ +ED T + I DF G++ D G L+ P ++
Sbjct: 157 DLAARNCMV--AEDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMS 202
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
L V + SD W+ G V +EI YQ N
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 152
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 204
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 205 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 242
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 152
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 204
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 205 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L ++LR Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 101 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV-----NSNL 155
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1040
++DFG S + ++ +S+ LGG + + P +F + S SDAW
Sbjct: 156 VCKVSDFGLSRFLEENSSDPTETSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAW 207
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSD 1095
+ G V +E+ Y N D +NA+ Q + P + +L+ + D +
Sbjct: 208 SYGIVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNA 266
Query: 1096 RP 1097
RP
Sbjct: 267 RP 268
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L ++LR Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 101 NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV-----NSNL 155
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1561
++DFG S + ++ +S+ LGG + + P +F + S SDAW
Sbjct: 156 VCKVSDFGLSRFLEENSSDPTETSS---LGGKIP-----IRWTAPEAIAFRKFTSASDAW 207
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
+ G V +E+ Y N D
Sbjct: 208 SYGIVMWEVMSFGERPYWDMSNQD 231
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 215
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 215
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 155
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 207
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 208 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 245
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 155
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKK 207
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 208 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V H + HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF--------YQ 1058
G ++PEV Y K D W G + Y + PF YQ
Sbjct: 168 ----GTPGYLSPEVLRKEA-------YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQ 216
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT---VCQ 1107
+ Y+ + P+ +T PE + L+ ++L +P+ R +A A VCQ
Sbjct: 217 QIKAGAYDFPS-PEWDTVTPEA-KNLINQMLTINPAKRITAHEALKHPWVCQ 266
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V H + HRDLK +N+LL +L DFG + + + A
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL--ADFGLAIEVQGDQQAWFGFA- 167
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
G ++PEV Y K D W G + Y + PF+ ++ Y
Sbjct: 168 ----GTPGYLSPEVLRKEA-------YGKPVDIWACGVILYILLVGYPPFWDEDQHKLY 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1006
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 227
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 228 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1527
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 227
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 228 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1006
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 213
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 214 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1527
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 213
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 214 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1006
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 229
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 230 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1527
Q LEG+ +L+ R H D+K+DN+LL S D + + + DFG + GL +
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL--SSDGS--RAALCDFGHALCLQPDGLGKSLLTG 229
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
D + G MAPEV + P +K D W++ + + +P+ Q R
Sbjct: 230 DY-IPGTETHMAPEVVMGKPC------DAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY- 1065
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 165 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 217
Query: 1066 EVNA------LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
++ A P+ +T PE + L+ +L +P R +A+ A V
Sbjct: 218 QIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 262
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 165 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 27/234 (11%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
+ L ++ + + DL+ Y L QLL+G+ + HRDLK N+
Sbjct: 73 DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ N +L + DFG G+ ++ SA++ + P+V LF
Sbjct: 133 LI-----NRNGELKLADFG--LARAFGIPVRCYSAEVV---TLWYRPPDV------LFGA 176
Query: 1553 VNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYE 1611
YS S D W+AG + E+ P + D R +++ L PS
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKR--IFRLLGTPTEEQWPSMTKLP 234
Query: 1612 IFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1665
+ P Y + T VN +P+LN R L+ LL+ +P R SAE A
Sbjct: 235 DY-KPYPMYPA---TTSLVNVVPKLNA----TGRDLLQNLLKCNPVQRISAEEA 280
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
+ L ++ + + DL+ Y L QLL+G+ + HRDLK N+
Sbjct: 73 DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ N +L + DFG G+ ++ SA++ + P+V LF
Sbjct: 133 LI-----NRNGELKLADFG--LARAFGIPVRCYSAEVV---TLWYRPPDV------LFGA 176
Query: 1032 VNYSKS-DAWTAGTVAYEIFGHDNPFYQS-------------------------ARNTDY 1065
YS S D W+AG + E+ P + + DY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 1066 E-----------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ VN +P+LN R L+ LL+ +P R SAE A
Sbjct: 237 KPYPMYPATTSLVNVVPKLNA----TGRDLLQNLLKCNPVQRISAEEA 280
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 907 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1023
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 151 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNTFVGTPFWMAPEVIK 197
Query: 1024 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-SARNTDYEV--NALPQLNTNVPEV 1080
+ SK+D W+ G A E+ + P + + + N P L N +
Sbjct: 198 QS------AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 251
Query: 1081 MRRLVAKLLENDPSDRPSAE 1100
++ V L +PS RP+A+
Sbjct: 252 LKEFVEACLNKEPSFRPTAK 271
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 62/239 (25%)
Query: 1428 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G Y ++ L+I+M+ L E L + + ++L+G+ +L+ + HRD+
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 1488 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG---GNVALMAPEVAL 1544
K+ N+LL SE ++ + DF G++ Q + I+ G MAPEV
Sbjct: 151 KAANVLL--SEHG---EVKLADF--------GVAGQLTDTQIKRNTFVGTPFWMAPEVIK 197
Query: 1545 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTT 1604
+ SK+D W+ G A E+ + P HS
Sbjct: 198 QS------AYDSKADIWSLGITAIELARGEPP-----------------------HSELH 228
Query: 1605 PSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P V + + +NP P L N + ++ V L +PS RP+A+
Sbjct: 229 PMKVLF-LIPKNNP---------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MRIADFGLA---RDINNIDYYKK 215
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MRIADFGLA---RDINNIDYYKK 215
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 996
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAS 175
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNP 1055
+ M APEV L + Y ++ D W+ G + E+ +
Sbjct: 176 TNFMMTPYVV------TRYYRAPEVILG-------MGYKENVDIWSVGCIMGELV-KGSV 221
Query: 1056 FYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+Q + D + QL T E M L V +EN P+
Sbjct: 222 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPA 263
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 1517
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAS 175
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNP 1576
+ M APEV L + Y ++ D W+ G + E+ +
Sbjct: 176 TNFMMTPYVV------TRYYRAPEVILG-------MGYKENVDIWSVGCIMGELV-KGSV 221
Query: 1577 FYQSARNTDYWHR 1589
+Q + D W++
Sbjct: 222 IFQGTDHIDQWNK 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 87/242 (35%), Gaps = 60/242 (24%)
Query: 871 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 930
HPN+V +H F D + + L+ L R+ + + +I+ K
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK---------- 114
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
L+ V+H++ HRDLK +N+L DN ++ I DFG
Sbjct: 115 ------------------LVSAVSHMHDVGVVHRDLKPENLLFTDENDNL--EIKIIDFG 154
Query: 991 SSYTNKSGLSMQYSSADIELGGNVALMAPEVAL--ATPGLFSFVNYSKS-DAWTAGTVAY 1047
A ++ N L P L A P L + Y +S D W+ G + Y
Sbjct: 155 --------------FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 1048 EIFGHDNPFYQSARN--TDYEVNALPQLN-----------TNVPEVMRRLVAKLLENDPS 1094
+ PF R+ V + ++ NV + + L+ LL DP+
Sbjct: 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPN 260
Query: 1095 DR 1096
R
Sbjct: 261 KR 262
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 93/271 (34%), Gaps = 76/271 (28%)
Query: 1392 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 1451
HPN+V +H F D + + L+ L R+ + + +I+ K
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK---------- 114
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
L+ V+H++ HRDLK +N+L DN ++ I DFG
Sbjct: 115 ------------------LVSAVSHMHDVGVVHRDLKPENLLFTDENDNL--EIKIIDFG 154
Query: 1512 SSYTNKSGLSMQYSSADIELGGNVALMAPEVAL--ATPGLFSFVNYSKS-DAWTAGTVAY 1568
A ++ N L P L A P L + Y +S D W+ G + Y
Sbjct: 155 --------------FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 1569 EIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDY 1628
+ PF SH + T A EI + + D+
Sbjct: 201 TMLSGQVPF--------------------QSHDRSLTCTSAVEIM-------KKIKKGDF 233
Query: 1629 EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1659
+ NV + + L+ LL DP+ R
Sbjct: 234 SFEG--EAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+G+ L I+ +L + ++ER Q + E + + + L+ H AHRD+K
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 155
Query: 968 SDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
+N+L E + L +TDFG + T ++ L + +APEV
Sbjct: 156 PENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP--------YYVAPEV----- 200
Query: 1027 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA---------RNTDYEVNALPQLN-T 1075
Y KS D W+ G + Y + PFY + R P +
Sbjct: 201 --LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 258
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++L+ LL+ DP++R
Sbjct: 259 EVSEDAKQLIRLLLKTDPTER 279
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 1430 YGRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+G+ L I+ +L + ++ER Q + E + + + L+ H AHRD+K
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 155
Query: 1489 SDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
+N+L E + L +TDFG + T ++ L + +APEV
Sbjct: 156 PENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP--------YYVAPEV----- 200
Query: 1548 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 201 --LGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 67/280 (23%)
Query: 1319 IQIGKFIAKGTNAVVYEA--TFRGVEYALKMMFNYSAASNSHAILKAMSXXXXXXXXXXX 1376
+++ + +A+G A VYEA G EYALK + + N AI++ +
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN-RAIIQEVCF---------- 78
Query: 1377 XXXDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSL 1436
++ L HPN+V A +++ + TG
Sbjct: 79 ---------MKKLSGHPNIVQFCSA----------------ASIGKEESDTG----QAEF 109
Query: 1437 FILMKKYNTDLRNYLR--ERCAQLSMHERILLFTQLLEGVTHLNMHRTA----HRDLKSD 1490
+L + L +L+ E LS + +F Q V H MHR HRDLK +
Sbjct: 110 LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH--MHRQKPPIIHRDLKVE 167
Query: 1491 NILLDCSEDNTCPQLVITDFGSS-----YTNKSGLSMQYSSADIELGGNVALM--APEVA 1543
N+LL S T + + DFGS+ Y + S + + + + E+ N M PE+
Sbjct: 168 NLLL--SNQGT---IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222
Query: 1544 LATPGLFS-FVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
L+S F K D W G + Y + +PF A+
Sbjct: 223 ----DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 33/188 (17%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTA----HRDLKSDNILLDCSEDNTCPQLVITDFGSS 992
LS + +F Q V H MHR HRDLK +N+LL S T + + DFGS+
Sbjct: 133 LSCDTVLKIFYQTCRAVQH--MHRQKPPIIHRDLKVENLLL--SNQGT---IKLCDFGSA 185
Query: 993 -----YTNKSGLSMQYSSADIELGGNVALM--APEVALATPGLFS-FVNYSKSDAWTAGT 1044
Y + S + + + + E+ N M PE+ L+S F K D W G
Sbjct: 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII----DLYSNFPIGEKQDIWALGC 241
Query: 1045 VAYEIFGHDNPFYQSAR----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ Y + +PF A+ N Y ++P +T V L+ +L+ +P +R S
Sbjct: 242 ILYLLCFRQHPFEDGAKLRIVNGKY---SIPPHDTQYT-VFHSLIRAMLQVNPEERLS-- 295
Query: 1101 LAATVCQL 1108
+A V QL
Sbjct: 296 IAEVVHQL 303
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRER-------C--------AQLSMHERILLF 946
+N G ++ L+++++ +LR YL+ R C QLS + +
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 156
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + + + Y
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA---RDIHHIDYYKK 208
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF + +SD W+ G + +EIF
Sbjct: 209 TTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRER-------C--------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YL+ R C QLS + +
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCA 156
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + + + Y
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA---RDIHHIDYYKK 208
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF + +SD W+ G + +EIF
Sbjct: 209 TTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 43/175 (24%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGL 999
Q+ EG+ + HRDL++ NIL+ S C I DFG + YT + G
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCK---IADFGLARVIEDNEYTAREGA 172
Query: 1000 SMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIF-------- 1050
+ APE +F +++ KSD W+ G + EI
Sbjct: 173 KFP-----------IKWTAPEA-------INFGSFTIKSDVWSFGILLMEIVTYGRIPYP 214
Query: 1051 GHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
G NP A Y +P+ N PE + ++ + +N P +RP+ E +V
Sbjct: 215 GMSNPEVIRALERGYR---MPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSV 265
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 31/126 (24%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGL 1520
Q+ EG+ + HRDL++ NIL+ S C I DFG + YT + G
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCK---IADFGLARVIEDNEYTAREGA 172
Query: 1521 SMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQ 1579
+ APE +F +++ KSD W+ G + EI + Y
Sbjct: 173 KFP-----------IKWTAPEA-------INFGSFTIKSDVWSFGILLMEIVTYGRIPYP 214
Query: 1580 SARNTD 1585
N +
Sbjct: 215 GMSNPE 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 990
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 159
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 160 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 202
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAAT 1104
I H Y N + N N PE + +L+ + P DRP+ + +
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262
Query: 1105 VCQ 1107
V +
Sbjct: 263 VLE 265
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 1511
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 159
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 160 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 202
Query: 1570 IFGHDNPFYQSARNTD 1585
I H Y N +
Sbjct: 203 IVTHGRIPYPGMTNPE 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV-----NSNL 168
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 169 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 219
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + + SDR
Sbjct: 220 YGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDR 278
Query: 1097 P 1097
P
Sbjct: 279 P 279
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV-----NSNL 168
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 169 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 219
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 220 YGIVMWEVMSYGERPYWDMSNQD 242
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Query: 914 SLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
+L+++M Y DL L + +L +++ + ++ HRD+K DNIL
Sbjct: 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL 207
Query: 973 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 1032
+D + + + DFGS ++Q S A G ++PE+ A G
Sbjct: 208 MDMN-----GHIRLADFGSCLKLMEDGTVQSSVA----VGTPDYISPEILQAMEGGKGRY 258
Query: 1033 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQLNTNVPEVMRRLV 1085
+ D W+ G YE+ + PFY + Y E P T+V E + L+
Sbjct: 259 G-PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
Query: 1086 AKLL 1089
+L+
Sbjct: 318 RRLI 321
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 1435 SLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
+L+++M Y DL L + +L +++ + ++ HRD+K DNIL
Sbjct: 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL 207
Query: 1494 LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 1553
+D + + + DFGS ++Q S A G ++PE+ A G
Sbjct: 208 MDMN-----GHIRLADFGSCLKLMEDGTVQSSVA----VGTPDYISPEILQAMEGGKGRY 258
Query: 1554 NYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
+ D W+ G YE+ + PFY +
Sbjct: 259 G-PECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 157 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 201
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 202 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 255
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 256 PDNCPDMLFELMRMCWQYNPKMRPS 280
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 97 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 156
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 157 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 201
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 202 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 240
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 857 NEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLF 916
E +LM + HPNV+ + ++ P LP L P +G
Sbjct: 71 REGLLMRGLN----HPNVLAL------------IGIMLPPEGLPHVLLPYMCHG------ 108
Query: 917 ILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCS 976
DL ++R ++ + I Q+ G+ +L + HRDL + N +LD
Sbjct: 109 --------DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD-- 158
Query: 977 EDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 1036
E T + + DFG + + L +Y S ++ + L AL + + F +K
Sbjct: 159 ESFT---VKVADFGLA---RDILDREYYS--VQQHRHARLPVKWTALESLQTYRFT--TK 208
Query: 1037 SDAWTAGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLEN 1091
SD W+ G + +E+ P Y+ D + LPQ P+ + +++ + E
Sbjct: 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEA 267
Query: 1092 DPSDRPS 1098
DP+ RP+
Sbjct: 268 DPAVRPT 274
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 97/266 (36%), Gaps = 53/266 (19%)
Query: 1323 KFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSXXXXXXXXXXXXXXDML 1382
+ I KG VVY + A + +K++S +L
Sbjct: 27 RVIGKGHFGVVYHGEYID-----------QAQNRIQCAIKSLSRITEMQQVEAFLREGLL 75
Query: 1383 MNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKK 1442
M + HPNV+ + ++ P LP L P +G
Sbjct: 76 MRGLN----HPNVLAL------------IGIMLPPEGLPHVLLPYMCHG----------- 108
Query: 1443 YNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
DL ++R ++ + I Q+ G+ +L + HRDL + N +LD E T
Sbjct: 109 ---DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD--ESFT- 162
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWT 1562
+ + DFG + + L +Y S ++ + L AL + + F +KSD W+
Sbjct: 163 --VKVADFGLA---RDILDREYYS--VQQHRHARLPVKWTALESLQTYRFT--TKSDVWS 213
Query: 1563 AGTVAYEIFGHDNPFYQSARNTDYWH 1588
G + +E+ P Y+ D H
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTH 239
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 125 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 184
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T I DFG + Y K G + V M
Sbjct: 185 DLAARNCMV--AEDFTVK---IGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 229
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 230 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 283
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 284 PDNCPDMLFELMRMCWQYNPKMRPS 308
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 125 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 184
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T I DFG + Y K G + V M
Sbjct: 185 DLAARNCMV--AEDFTVK---IGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 229
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 230 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 268
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 895 YPSALPAR--LNPTGGYGRNMSLFILMKK-YNTDLRNYLRERCAQLSMHERILLFTQLLE 951
Y + L R + P + +LFI M+ N L + + E LF Q+LE
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 952 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIEL 1010
+++++ HRDLK NI +D S + + I DFG + ++S ++ S ++
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRN-----VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 1011 GGN--VALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-- 1065
+ + + + +AT L +Y+ K D ++ G + +E+ PF +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 1066 -----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ P + N +V ++++ L+++DP+ RP A
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 48/253 (18%)
Query: 1416 YPSALPAR--LNPTGGYGRNMSLFILMKK-YNTDLRNYLRERCAQLSMHERILLFTQLLE 1472
Y + L R + P + +LFI M+ N L + + E LF Q+LE
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 1473 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1532
+++++ HRDLK NI +D S + + I DFG L
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRN-----VKIGDFG-------------------LA 163
Query: 1533 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF---GHDNPFYQSARNTDYWHR 1589
NV + L + L + S TA VA E+ GH N D +
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE------KIDMYSL 217
Query: 1590 KWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVA 1649
++ ++Y S+ + R+ E P + N +V ++++
Sbjct: 218 GIIFFEMIYPFSTGMERV----------NILKKLRSVSIEFP--PDFDDNKMKVEKKIIR 265
Query: 1650 KLLENDPSDRPSA 1662
L+++DP+ RP A
Sbjct: 266 LLIDHDPNKRPGA 278
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ ++L G++HL+ H+ HRD+K N+LL +N +LV DFG S + + +
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLV--DFGVSAQLDRTVGRRNT 188
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
G MAPEV + ++ KSD W+ G A E+
Sbjct: 189 -----FIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEM 227
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ ++L G++HL+ H+ HRD+K N+LL +N +LV DFG S + + +
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLV--DFGVSAQLDRTVGRRNT 188
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
G MAPEV + ++ KSD W+ G A E+
Sbjct: 189 -----FIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEM 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 990
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 111 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 165
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 166 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 208
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAAT 1104
I H Y N + N N PE + +L+ + P DRP+ + +
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 268
Query: 1105 VCQ 1107
V +
Sbjct: 269 VLE 271
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 1511
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 111 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 165
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 166 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 208
Query: 1570 IFGHDNPFYQSARNTD 1585
I H Y N +
Sbjct: 209 IVTHGRIPYPGMTNPE 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 101 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 158
Query: 982 PQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
I DFG + YT + G + APE +NY
Sbjct: 159 K---IADFGLARLIEDNEYTAREGAKFP-----------IKWTAPEA----------INY 194
Query: 1035 S----KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVA 1086
KSD W+ G + EI H Y N + N N PE + +L+
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 254
Query: 1087 KLLENDPSDRPSAELAATVCQLYLWA 1112
+ P DRP+ + +V + + A
Sbjct: 255 LCWKERPEDRPTFDYLRSVLEDFFTA 280
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 38/154 (24%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 101 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 158
Query: 1503 PQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
I DFG + YT + G + APE +NY
Sbjct: 159 K---IADFGLARLIEDNEYTAREGAKFP-----------IKWTAPEA----------INY 194
Query: 1556 S----KSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
KSD W+ G + EI H Y N +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY- 1065
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 165 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 217
Query: 1066 EVNA------LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
++ A P+ +T PE + L+ +L +P R +A+ A V
Sbjct: 218 QIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 262
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 165 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 48/203 (23%)
Query: 913 MSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
MS L+ ++ YLR + + + + Q+ G+ ++ HRDL++ NIL
Sbjct: 94 MSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 973 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
+ E+ C + DFG + YT + G + APE AL
Sbjct: 147 V--GENLVCK---VADFGLARLIEDNEYTARQGAKF-----------PIKWTAPEAALY- 189
Query: 1026 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------YEVNALPQLNTNV 1077
G F+ KSD W+ G + E+ Y N + Y + P+
Sbjct: 190 -GRFTI----KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE----C 240
Query: 1078 PEVMRRLVAKLLENDPSDRPSAE 1100
PE + L+ + DP +RP+ E
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFE 263
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 83/237 (35%), Gaps = 74/237 (31%)
Query: 1434 MSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
MS L+ ++ YLR + + + + Q+ G+ ++ HRDL++ NIL
Sbjct: 94 MSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 1494 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
+ E+ C + DFG + YT + G + APE AL
Sbjct: 147 V--GENLVCK---VADFGLARLIEDNEYTARQGAKF-----------PIKWTAPEAALY- 189
Query: 1547 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPS 1606
G F+ KSD W+ G + E+ TT
Sbjct: 190 -GRFTI----KSDVWSFGILLTEL--------------------------------TTKG 212
Query: 1607 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
V Y + Q R Y + P+ PE + L+ + DP +RP+ E
Sbjct: 213 RVPYPGMVNREVLDQVERG--YRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 150 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 194
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 195 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 248
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 249 PDNCPDMLFELMRMCWQYNPKMRPS 273
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 150 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 194
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 195 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 990
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 100 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 154
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 155 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 197
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAAT 1104
I H Y N + N N PE + +L+ + P DRP+ + +
Sbjct: 198 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 257
Query: 1105 VCQLYLWA 1112
V + + A
Sbjct: 258 VLEDFFTA 265
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 1511
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 100 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 154
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 155 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 197
Query: 1570 IFGHDNPFYQSARNTD 1585
I H Y N +
Sbjct: 198 IVTHGRIPYPGMTNPE 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 990
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 110 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 164
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 165 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 207
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAAT 1104
I H Y N + N N PE + +L+ + P DRP+ + +
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 267
Query: 1105 VCQ 1107
V +
Sbjct: 268 VLE 270
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 1511
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG
Sbjct: 110 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 164
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 165 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 207
Query: 1570 IFGHDNPFYQSARNTD 1585
I H Y N +
Sbjct: 208 IVTHGRIPYPGMTNPE 223
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1027
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEFFKVKEPGESPIFWYAPES--LTES 192
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HRDL +
Sbjct: 86 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRDLATR 143
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM--APEVALATPG 1548
NIL++ ++ I DFG + L ++ G + APE T
Sbjct: 144 NILVENEN-----RVKIGDFGLTKV----LPQDKEFFKVKEPGESPIFWYAPES--LTES 192
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
FS SD W+ G V YE+F
Sbjct: 193 KFSVA----SDVWSFGVVLYELF 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 112 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY- 1065
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 164 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 216
Query: 1066 EVNA------LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
++ A P+ +T PE + L+ +L +P R +A+ A V
Sbjct: 217 QIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 261
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 112 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL--ADFGLA------IEVNDSEAW 163
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 164 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 94 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 153
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 154 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 198
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 199 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 252
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 253 PDNCPDMLFELMRMCWQYNPKMRPS 277
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 94 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 153
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 154 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 198
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 199 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 237
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+LS E ++F Q++ V +++ AHRDLK +N+L D +L + DFG
Sbjct: 104 RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-----EYHKLKLIDFGLCAKP 158
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI------ 1570
K + G++A APE+ S++ S++D W+ G + Y +
Sbjct: 159 KGNKDYHLQTC----CGSLAYAAPELIQGK----SYLG-SEADVWSMGILLYVLMCGFLP 209
Query: 1571 FGHDN--PFYQSARNTDYWHRKWL 1592
F DN Y+ Y KWL
Sbjct: 210 FDDDNVMALYKKIMRGKYDVPKWL 233
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+LS E ++F Q++ V +++ AHRDLK +N+L D +L + DFG
Sbjct: 104 RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-----EYHKLKLIDFGLCAKP 158
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
K + G++A APE+ S++ S++D W+ G + Y + P
Sbjct: 159 KGNKDYHLQTC----CGSLAYAAPELIQGK----SYLG-SEADVWSMGILLYVLMCGFLP 209
Query: 1056 FYQSARNTDYEVNALPQLNTNVPEVMR----RLVAKLLENDPSDRPSAE 1100
F Y+ + + +VP+ + L+ ++L+ DP R S +
Sbjct: 210 FDDDNVMALYK--KIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMK 256
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 156 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 201 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 254
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 255 PDNCPDMLFELMRMCWQYNPKMRPS 279
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 156 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 201 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 239
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 48/203 (23%)
Query: 913 MSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 972
MS L+ ++ YLR + + + + Q+ G+ ++ HRDL++ NIL
Sbjct: 94 MSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 973 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
+ E+ C + DFG + YT + G + APE AL
Sbjct: 147 V--GENLVCK---VADFGLARLIEDNEYTARQGAKF-----------PIKWTAPEAALY- 189
Query: 1026 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------YEVNALPQLNTNV 1077
G F+ KSD W+ G + E+ Y N + Y + P+
Sbjct: 190 -GRFTI----KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE----C 240
Query: 1078 PEVMRRLVAKLLENDPSDRPSAE 1100
PE + L+ + DP +RP+ E
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFE 263
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 83/237 (35%), Gaps = 74/237 (31%)
Query: 1434 MSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNIL 1493
MS L+ ++ YLR + + + + Q+ G+ ++ HRDL++ NIL
Sbjct: 94 MSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 1494 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
+ E+ C + DFG + YT + G + APE AL
Sbjct: 147 V--GENLVCK---VADFGLARLIEDNEYTARQGAKF-----------PIKWTAPEAALY- 189
Query: 1547 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPS 1606
G F+ KSD W+ G + E+ TT
Sbjct: 190 -GRFTI----KSDVWSFGILLTEL--------------------------------TTKG 212
Query: 1607 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
V Y + Q R Y + P+ PE + L+ + DP +RP+ E
Sbjct: 213 RVPYPGMVNREVLDQVERG--YRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T I DFG + Y K G + V M
Sbjct: 156 DLAARNCMV--AEDFTVK---IGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 201 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 254
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 255 PDNCPDMLFELMRMCWQYNPKMRPS 279
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 96 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 155
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T I DFG + Y K G + V M
Sbjct: 156 DLAARNCMV--AEDFTVK---IGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 201 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 239
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 895 YPSALPAR--LNPTGGYGRNMSLFILMKK-YNTDLRNYLRERCAQLSMHERILLFTQLLE 951
Y + L R + P + +LFI M+ N L + + E LF Q+LE
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 952 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIEL 1010
+++++ HRDLK NI +D S + + I DFG + ++S ++ S ++
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRN-----VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 1011 GGN--VALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-- 1065
+ + + + +AT L +Y+ K D ++ G + +E+ PF +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 1066 -----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ P + N +V ++++ L+++DP+ RP A
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 48/253 (18%)
Query: 1416 YPSALPAR--LNPTGGYGRNMSLFILMKK-YNTDLRNYLRERCAQLSMHERILLFTQLLE 1472
Y + L R + P + +LFI M+ N L + + E LF Q+LE
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 1473 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1532
+++++ HRDLK NI +D S + + I DFG L
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRN-----VKIGDFG-------------------LA 163
Query: 1533 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF---GHDNPFYQSARNTDYWHR 1589
NV + L + L + S TA VA E+ GH N D +
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN------EKIDMYSL 217
Query: 1590 KWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVA 1649
++ ++Y S+ + R+ E P + N +V ++++
Sbjct: 218 GIIFFEMIYPFSTGMERV----------NILKKLRSVSIEFP--PDFDDNKMKVEKKIIR 265
Query: 1650 KLLENDPSDRPSA 1662
L+++DP+ RP A
Sbjct: 266 LLIDHDPNKRPGA 278
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 28/188 (14%)
Query: 1412 SSLIYPSALPARLNPTGGYG---RNMSLFILMKKYNTDLRNYLR--ERCAQLSMHERILL 1466
L +P+ + AR P G ++ L + DLR YL E C L L
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV---ITDFGSSYTNKSGLSMQ 1523
+ + + +L+ +R HRDLK +NI+L PQ + I D G + G
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVL-----QPGPQRLIHKIIDLGYAKELDQG---- 177
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR 1582
E G + +APE L Y+ + D W+ GT+A+E PF + +
Sbjct: 178 --ELCTEFVGTLQYLAPE-------LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228
Query: 1583 NTDYWHRK 1590
WH K
Sbjct: 229 PVQ-WHGK 235
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 891 SSLIYPSALPARLNPTGGYG---RNMSLFILMKKYNTDLRNYLR--ERCAQLSMHERILL 945
L +P+ + AR P G ++ L + DLR YL E C L L
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV---ITDFGSSYTNKSGLSMQ 1002
+ + + +L+ +R HRDLK +NI+L PQ + I D G + G
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVL-----QPGPQRLIHKIIDLGYAKELDQG---- 177
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1056
E G + +APE L Y+ + D W+ GT+A+E PF
Sbjct: 178 --ELCTEFVGTLQYLAPE-------LLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 163 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 207
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 208 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 261
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 262 PDNCPDMLFELMRMCWQYNPKMRPS 286
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 163 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 207
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 208 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 246
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+G+ L I+ +L + ++ER Q + E + + + L+ H AHRD+K
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 136
Query: 968 SDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
+N+L E + L +TDFG + T ++ L + +APEV
Sbjct: 137 PENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP--------YYVAPEV----- 181
Query: 1027 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA---------RNTDYEVNALPQLN-T 1075
Y KS D W+ G + Y + PFY + R P +
Sbjct: 182 --LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 239
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++L+ LL+ DP++R
Sbjct: 240 EVSEDAKQLIRLLLKTDPTER 260
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 1430 YGRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+G+ L I+ +L + ++ER Q + E + + + L+ H AHRD+K
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 136
Query: 1489 SDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1547
+N+L E + L +TDFG + T ++ L + +APEV
Sbjct: 137 PENLLYTSKEKDAV--LKLTDFGFAKETTQNALQTPCYTP--------YYVAPEV----- 181
Query: 1548 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 182 --LGPEKYDKSCDMWSLGVIMYILLCGFPPFY 211
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 903 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 946
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKN 215
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 1424 LNPTGGYGRNMSLFILMK-KYNTDLRNYLRERC---------------AQLSMHERILLF 1467
+N G ++ L+++++ +LR YLR R Q++ + +
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
QL G+ +L + HRDL + N+L+ +E+N + I DFG + + ++ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLV--TENNV---MKIADFGLA---RDINNIDYYKN 215
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
V MAPE LF V +SD W+ G + +EIF
Sbjct: 216 TTNGRLPVKWMAPE------ALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 925 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 1446 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 189
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 238
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 189
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 925 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 1446 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 41/217 (18%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L+ YL + ++++ +++ Q+ +G+ +L + HRDL + N+L++ Q+
Sbjct: 100 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVK 154
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
I DFG T + + + V APE + + F Y SD W+ G
Sbjct: 155 IGDFG--LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS----KF--YIASDVWSFGVT 206
Query: 1567 AYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFG--HDNPFYQSAR 1624
+E+ L Y S ++P + ++ G H
Sbjct: 207 LHEL-------------------------LTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 241
Query: 1625 NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
NT E LP N P+ + +L+ K E PS+R S
Sbjct: 242 NTLKEGKRLP-CPPNCPDEVYQLMRKCWEFQPSNRTS 277
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L+ YL + ++++ +++ Q+ +G+ +L + HRDL + N+L++ Q+
Sbjct: 100 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVK 154
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
I DFG T + + + V APE + + F Y SD W+ G
Sbjct: 155 IGDFG--LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS----KF--YIASDVWSFGVT 206
Query: 1046 AYEIFGHDNP-------FYQSARNTDYEVNALPQLNT-----------NVPEVMRRLVAK 1087
+E+ + + F + T ++ +NT N P+ + +L+ K
Sbjct: 207 LHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRK 266
Query: 1088 LLENDPSDRPS 1098
E PS+R S
Sbjct: 267 CWEFQPSNRTS 277
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 925 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 1446 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 28/188 (14%)
Query: 1412 SSLIYPSALPARLNPTGGYG---RNMSLFILMKKYNTDLRNYLR--ERCAQLSMHERILL 1466
L +P+ + AR P G ++ L + DLR YL E C L L
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV---ITDFGSSYTNKSGLSMQ 1523
+ + + +L+ +R HRDLK +NI+L PQ + I D G + G
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVL-----QPGPQRLIHKIIDLGYAKELDQG---- 178
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSAR 1582
E G + +APE L Y+ + D W+ GT+A+E PF + +
Sbjct: 179 --ELCTEFVGTLQYLAPE-------LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 229
Query: 1583 NTDYWHRK 1590
WH K
Sbjct: 230 PVQ-WHGK 236
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 891 SSLIYPSALPARLNPTGGYG---RNMSLFILMKKYNTDLRNYLR--ERCAQLSMHERILL 945
L +P+ + AR P G ++ L + DLR YL E C L L
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV---ITDFGSSYTNKSGLSMQ 1002
+ + + +L+ +R HRDLK +NI+L PQ + I D G + G
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVL-----QPGPQRLIHKIIDLGYAKELDQG---- 178
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPF 1056
E G + +APE L Y+ + D W+ GT+A+E PF
Sbjct: 179 --ELCTEFVGTLQYLAPE-------LLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 135 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 186
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 235
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 135 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 186
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 925 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 1446 DLRNYLRERC---------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
+LR YLR R Q++ + + QL G+ +L + HRDL +
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N+L+ +E+N + I DFG + + ++ Y V MAPE LF
Sbjct: 187 NVLV--TENNV---MKIADFGLA---RDINNIDYYKKTTNGRLPVKWMAPE------ALF 232
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIF 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 139 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 190
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 239
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 139 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 190
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 197
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 197
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 29/180 (16%)
Query: 925 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1040
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ G + Y++ D PF +V +++ ++R +A P DRP+ E
Sbjct: 215 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLAL----RPXDRPTFE 270
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 1446 DLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
DL +++ ER A + E + F Q+LE V H + HRD+K +NIL+D +
Sbjct: 116 DLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG---- 168
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA--W 1561
+L + DFGS K + + + + P + Y A W
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRV--------------YSPPEWIRYHRYHGRSAAVW 214
Query: 1562 TAGTVAYEIFGHDNPF 1577
+ G + Y++ D PF
Sbjct: 215 SLGILLYDMVCGDIPF 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 197
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 197
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV-----NSNL 147
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 148 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 198
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + + SDR
Sbjct: 199 YGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDR 257
Query: 1097 P 1097
P
Sbjct: 258 P 258
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV-----NSNL 147
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 148 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 198
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 199 YGIVMWEVMSYGERPYWDMSNQD 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + Y + P +A L +
Sbjct: 167 --EKFT---VKVADFGLARD-------MYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 274
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 275 PKAEMRPSFSELVSRISAIF 294
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ +L + HRDL + N +LD
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + Y + P +A L +
Sbjct: 167 --EKFT---VKVADFGLARD-------MYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 51/195 (26%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1000
Q+ EG+ + HRDL++ NIL+ S C I DFG + YT + G
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCK---IADFGLARVIEDNEYTAREGAK 346
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIF--------G 1051
+ APE +F +++ KSD W+ G + EI G
Sbjct: 347 FP-----------IKWTAPEA-------INFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
Query: 1052 HDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLW 1111
NP A Y +P+ N PE + ++ + +N P +RP+ E +V +
Sbjct: 389 MSNPEVIRALERGYR---MPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF-- 442
Query: 1112 APKHWLYGATPSHNE 1126
Y AT S E
Sbjct: 443 ------YTATESQXE 451
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 31/110 (28%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1521
Q+ EG+ + HRDL++ NIL+ S C I DFG + YT + G
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCK---IADFGLARVIEDNEYTAREGAK 346
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
+ APE +F +++ KSD W+ G + EI
Sbjct: 347 FP-----------IKWTAPEA-------INFGSFTIKSDVWSFGILLMEI 378
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 930 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 989
L+++ L+ + + L + G+ ++ AHRDLK NILL D P V+ D
Sbjct: 124 LKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQP--VLMDL 178
Query: 990 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTV 1045
GS N++ + ++ S + L + A ++ P LFS ++ ++D W+ G V
Sbjct: 179 GS--MNQACIHVEGSRQALTL-QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMR------RLVAKLLENDPSDRPSA 1099
Y + + P+ + D A+ Q ++P+ R +L+ ++ DP RP
Sbjct: 236 LYAMMFGEGPYDMVFQKGDSVALAV-QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI 294
Query: 1100 EL 1101
L
Sbjct: 295 PL 296
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 1451 LRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDF 1510
L+++ L+ + + L + G+ ++ AHRDLK NILL D P V+ D
Sbjct: 124 LKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQP--VLMDL 178
Query: 1511 GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTV 1566
GS N++ + ++ S + L + A ++ P LFS ++ ++D W+ G V
Sbjct: 179 GS--MNQACIHVEGSRQALTL-QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235
Query: 1567 AYEIFGHDNPF 1577
Y + + P+
Sbjct: 236 LYAMMFGEGPY 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 238
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 287
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG +
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA--- 238
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + Y V MAPE LF + +SD W+ G + +EIF
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 41/217 (18%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L+ YL + ++++ +++ Q+ +G+ +L + HRDL + N+L++ Q+
Sbjct: 112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVK 166
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
I DFG T + + + V APE + + F Y SD W+ G
Sbjct: 167 IGDFG--LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS----KF--YIASDVWSFGVT 218
Query: 1567 AYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFG--HDNPFYQSAR 1624
+E+ L Y S ++P + ++ G H
Sbjct: 219 LHEL-------------------------LTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253
Query: 1625 NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1661
NT E LP N P+ + +L+ K E PS+R S
Sbjct: 254 NTLKEGKRLP-CPPNCPDEVYQLMRKCWEFQPSNRTS 289
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L+ YL + ++++ +++ Q+ +G+ +L + HRDL + N+L++ Q+
Sbjct: 112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVK 166
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
I DFG T + + + V APE + + F Y SD W+ G
Sbjct: 167 IGDFG--LTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS----KF--YIASDVWSFGVT 218
Query: 1046 AYEIFGHDNP-------FYQSARNTDYEVNALPQLNT-----------NVPEVMRRLVAK 1087
+E+ + + F + T ++ +NT N P+ + +L+ K
Sbjct: 219 LHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRK 278
Query: 1088 LLENDPSDRPS 1098
E PS+R S
Sbjct: 279 CWEFQPSNRTS 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN----VALMAPE 1020
DL + N ++ + D T + I DFG + Y +A GG V MAPE
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDFGMTRD-------IYETAYYRKGGKGLLPVRWMAPE 202
Query: 1021 VALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNT 1075
G+F+ + SD W+ G V +EI YQ N + L Q +
Sbjct: 203 S--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD- 255
Query: 1076 NVPEVMRRLVAKLLENDPSDRPS 1098
N PE + L+ + +P RP+
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPT 278
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 31/162 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN----VALMAPE 1541
DL + N ++ + D T + I DFG + Y +A GG V MAPE
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDFGMTRD-------IYETAYYRKGGKGLLPVRWMAPE 202
Query: 1542 VALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G+F+ + SD W+ G V +EI YQ N
Sbjct: 203 S--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 100 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 154
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 155 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 197
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 198 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 252
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 100 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 154
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 155 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 197
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 198 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 223
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 224 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 252
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 20/190 (10%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L+ +M+ N Y ++ + + + ++ G+ L+ +RDLK DN++LD
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
SE + + I DFG + M E G +APE+ P Y
Sbjct: 155 -SEGH----IKIADFGMCKEH-----MMDGVTTREFCGTPDYIAPEIIAYQP-------Y 197
Query: 1035 SKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDP 1093
KS D W G + YE+ PF + D ++ + N + P+ + + + +
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPF--DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLM 255
Query: 1094 SDRPSAELAA 1103
+ P+ L
Sbjct: 256 TKHPAKRLGC 265
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L+ +M+ N Y ++ + + + ++ G+ L+ +RDLK DN++LD
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
SE + + I DFG + M E G +APE+ P Y
Sbjct: 155 -SEGH----IKIADFGMCKEH-----MMDGVTTREFCGTPDYIAPEIIAYQP-------Y 197
Query: 1556 SKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYE 1611
KS D W G + YE+ PF D L+Q ++ H+ + P +++ E
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPF-------DGEDEDELFQSIM-EHNVSYPKSLSKE 246
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLL-----GSNGELKIADFGWSVHAP-------SSR 166
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
L G + + PE+ + ++ K D W+ G + YE PF Y
Sbjct: 167 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDR 1096
+ + V E R L+++LL+++ S R
Sbjct: 221 RISRVEFTFPDFVTEGARDLISRLLKHNASQR 252
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S SS
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLL-----GSNGELKIADFGWSVHAP-------SSR 166
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
L G + + PE+ + ++ K D W+ G + YE PF
Sbjct: 167 RTTLCGTLDYLPPEM------IEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + QLS Q+L G+ +++ HRDLK N+L+
Sbjct: 120 DVYIVQDLMETDLYKLLKSQ--QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI 177
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
NT L I DFG + + ++ E APE+ L + G
Sbjct: 178 -----NTTCDLKICDFGLARI--ADPEHDHTGFLTEXVATRWYRAPEIMLNSKG------ 224
Query: 1034 YSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 225 YTKSIDIWSVGCILAEML 242
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + QLS Q+L G+ +++ HRDLK N+L+
Sbjct: 120 DVYIVQDLMETDLYKLLKSQ--QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI 177
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
NT L I DFG + + ++ E APE+ L + G
Sbjct: 178 -----NTTCDLKICDFGLARI--ADPEHDHTGFLTEXVATRWYRAPEIMLNSKG------ 224
Query: 1555 YSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 225 YTKSIDIWSVGCILAEML 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRER---------CAQLSMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR A S+ + I + ++ +G+ +LN ++ HR
Sbjct: 93 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 152
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 153 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 197
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 198 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 251
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 252 PDNCPDMLFELMRMCWQYNPKMRPS 276
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRER---------CAQLSMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR A S+ + I + ++ +G+ +LN ++ HR
Sbjct: 93 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 152
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 153 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 197
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 198 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV-----NSNL 153
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 154 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 204
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + + SDR
Sbjct: 205 YGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDR 263
Query: 1097 P 1097
P
Sbjct: 264 P 264
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +LR+ + ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV-----NSNL 153
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + P ++ + S SD W+
Sbjct: 154 VCKVSDFGMSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAYRKFTSASDVWS 204
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 205 YGIVMWEVMSYGERPYWDMSNQD 227
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 275
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 276 PKAEMRPSFSELVSRISAIF 295
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 209 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 234
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 235 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 926 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
LR+YL L+ ++LLF Q + EG+ +L+ HR+L + N+LLD +L
Sbjct: 105 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDND------RL 155
Query: 985 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1043
V I DFG + G +Y + V APE L + Y SD W+ G
Sbjct: 156 VKIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKEYKFYYASDVWSFG 207
Query: 1044 TVAYEIFGH 1052
YE+ H
Sbjct: 208 VTLYELLTH 216
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
LR+YL L+ ++LLF Q + EG+ +L+ HR+L + N+LLD +L
Sbjct: 105 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDND------RL 155
Query: 1506 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1564
V I DFG + G +Y + V APE L + Y SD W+ G
Sbjct: 156 VKIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKEYKFYYASDVWSFG 207
Query: 1565 TVAYEIFGH 1573
YE+ H
Sbjct: 208 VTLYELLTH 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA--DFGLA------IEVNDSEAW 187
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY- 1065
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 188 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 240
Query: 1066 EVNA------LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
++ A P+ +T PE + L+ +L +P R +A+ A V
Sbjct: 241 QIKAGAYDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 285
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE + + + + HR+LK +N+LL +L DFG + + + S A
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA--DFGLA------IEVNDSEAW 187
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDY 1586
G ++PEV P YSK D W G + Y + PF+ ++ Y
Sbjct: 188 HGFAGTPGYLSPEVLKKDP-------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 209 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 234
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 235 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 209 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 234
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 235 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 165
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 166 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 213
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 273
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 274 PKAEMRPSFSELVSRISAIF 293
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 165
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 166 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 213
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRER---------CAQLSMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR A S+ + I + ++ +G+ +LN ++ HR
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 163 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 207
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 208 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 261
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 262 PDNCPDMLFELMRMCWQYNPKMRPS 286
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRER---------CAQLSMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR A S+ + I + ++ +G+ +LN ++ HR
Sbjct: 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ +ED T + I DFG + Y K G + V M
Sbjct: 163 DLAARNCMV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 207
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 208 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 246
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 102 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 156
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 157 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 199
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 200 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 254
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 102 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 156
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 157 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 199
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 200 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 225
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 226 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 254
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 148
Query: 982 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1037
I DFG + + A + APE +NY KS
Sbjct: 149 K---IADFGLARLIEDAEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 191
Query: 1038 DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDP 1093
D W+ G + EI H Y N + N N PE + +L+ + P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 1094 SDRPSAELAATVCQ 1107
DRP+ + +V +
Sbjct: 252 EDRPTFDYLRSVLE 265
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 24/147 (16%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 148
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1558
I DFG + + A + APE +NY KS
Sbjct: 149 K---IADFGLARLIEDAEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 191
Query: 1559 DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
D W+ G + EI H Y N +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 209 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 234
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 235 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 43/289 (14%)
Query: 848 TNALQYIQRNEDMLMNSVENLPPHPNVVVMHFAFT----DFVPSIPDSSLIYPSALPARL 903
T ++ ++ N + V+ L +V ++H+ D+ P D SL P
Sbjct: 39 TYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPEN- 97
Query: 904 NPTGGYGRNMSLFILMKKYNT-DLRNYL-RERCAQLSMHERILLFTQLLEGVTHLNMHRT 961
+ + LFI M+ + L ++ + R +L + LF Q+ +GV +++ +
Sbjct: 98 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL 157
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRDLK NI L ++ Q+ I DFG + K+ S G + M+PE
Sbjct: 158 IHRDLKPSNIFLVDTK-----QVKIGDFGLVTSLKNDGKRTRSK------GTLRYMSPE- 205
Query: 1022 ALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH--DNPFYQSARNTDYEVNALPQLNTNVP 1078
S +Y K D + G + E+ H D F S TD + +
Sbjct: 206 ------QISSQDYGKEVDLYALGLILAELL-HVCDTAFETSKFFTDLRDGIISDI---FD 255
Query: 1079 EVMRRLVAKLLENDPSDRP-SAELAATVCQLYLWAPKHWLYGATPSHNE 1126
+ + L+ KLL P DRP ++E+ T L +W +P NE
Sbjct: 256 KKEKTLLQKLLSKKPEDRPNTSEILRT---LTVWK-------KSPEKNE 294
Score = 34.3 bits (77), Expect = 0.61, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 1404 DFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYL-RERCAQLSMH 1461
D+ P D SL P + + LFI M+ + L ++ + R +L
Sbjct: 78 DYDPETSDDSLESSDYDPEN-SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 1462 ERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
+ LF Q+ +GV +++ + HRDLK NI L ++ Q+ I DFG
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK-----QVKIGDFG 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 172
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 173 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 220
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 221 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 280
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 281 PKAEMRPSFSELVSRISAIF 300
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 172
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 173 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 220
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 221 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 275
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 276 PKAEMRPSFSELVSRISAIF 295
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 168 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 215
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTSDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTSDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFG 1051
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFG 1572
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 227 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 274
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 275 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 334
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 335 PKAEMRPSFSELVSRISAIF 354
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 227 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 274
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 275 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 100 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 157
Query: 982 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1037
I DFG + + A + APE +NY KS
Sbjct: 158 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 200
Query: 1038 DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDP 1093
D W+ G + EI H Y N + N N PE + +L+ + P
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 260
Query: 1094 SDRPSAELAATVCQLYLWA 1112
DRP+ + +V + + A
Sbjct: 261 EDRPTFDYLRSVLEDFFTA 279
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 24/147 (16%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 100 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 157
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1558
I DFG + + A + APE +NY KS
Sbjct: 158 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 200
Query: 1559 DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
D W+ G + EI H Y N +
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPE 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N + +ED T + I DFG + Y K G + V M
Sbjct: 150 DLAARNCXV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 194
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL 1073
+PE G+F+ + SD W+ G V +EI YQ N L
Sbjct: 195 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 248
Query: 1074 NTNVPEVMRRLVAKLLENDPSDRPS 1098
N P+++ L+ + +P RPS
Sbjct: 249 PDNCPDMLLELMRMCWQYNPKMRPS 273
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L I+ DL++YLR ++ S+ + I + ++ +G+ +LN ++ HR
Sbjct: 90 TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 149
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N + +ED T + I DFG + Y K G + V M
Sbjct: 150 DLAARNCXV--AEDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 194
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+PE G+F+ + SD W+ G V +EI YQ N
Sbjct: 195 SPES--LKDGVFT----TYSDVWSFGVVLWEIATLAEQPYQGLSN 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 169 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 216
Query: 1035 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV----MRRLVAKLLE 1090
+KSD W+ G + +E+ P Y D V L PE + ++ K
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 276
Query: 1091 NDPSDRPS-AELAATVCQLY 1109
RPS +EL + + ++
Sbjct: 277 PKAEMRPSFSELVSRISAIF 296
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L +L + DLRN++R ++ + I Q+ +G+ L + HRDL + N +LD
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
E T + + DFG + + ++ S + G + P +A L +
Sbjct: 169 --EKFT---VKVADFGLA---RDMYDKEFDSVHNKTGAKL----PVKWMALESLQTQKFT 216
Query: 1556 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
+KSD W+ G + +E+ P Y D
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFG 1051
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFG 1572
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 191 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 240
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
L + G + + D W+ G YE+ D PFY +
Sbjct: 241 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 277
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 191 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 240
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
L + G + + D W+ G YE+ D PFY +
Sbjct: 241 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 196 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 245
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
L + G + + D W+ G YE+ D PFY +
Sbjct: 246 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 282
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 196 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 245
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
L + G + + D W+ G YE+ D PFY +
Sbjct: 246 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 46/195 (23%)
Query: 942 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 993
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 109 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 161
Query: 994 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 162 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 1049 IF----------GHDNPFYQSARNTD-----YEVNALPQLNTNVP-----EVMRRLVAKL 1088
+ + PFY N +V + Q N+P + +AKL
Sbjct: 216 VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKL 275
Query: 1089 LENDPSDRPSAELAA 1103
++ PSA L A
Sbjct: 276 MKECWYQNPSARLTA 290
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 1463 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 1514
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 109 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 161
Query: 1515 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 162 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 1570 I 1570
+
Sbjct: 216 V 216
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 209 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 261
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 262 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 306
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 307 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 338
Q N+P + +AKL++ PSA L A
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 650 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 702
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 703 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 747
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 748 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 779
Q N+P + +AKL++ PSA L A
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 27/234 (11%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
+ L ++ + + DL+ Y L QLL+G+ + HRDLK N+
Sbjct: 73 DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ N +L + +FG G+ ++ SA++ + P+V LF
Sbjct: 133 LI-----NRNGELKLANFG--LARAFGIPVRCYSAEVV---TLWYRPPDV------LFGA 176
Query: 1553 VNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYE 1611
YS S D W+AG + E+ P + D R +++ L PS
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR--IFRLLGTPTEEQWPSMTKLP 234
Query: 1612 IFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1665
+ P Y + T VN +P+LN R L+ LL+ +P R SAE A
Sbjct: 235 DY-KPYPMYPA---TTSLVNVVPKLNA----TGRDLLQNLLKCNPVQRISAEEA 280
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
+ L ++ + + DL+ Y L QLL+G+ + HRDLK N+
Sbjct: 73 DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ N +L + +FG G+ ++ SA++ + P+V LF
Sbjct: 133 LI-----NRNGELKLANFG--LARAFGIPVRCYSAEVV---TLWYRPPDV------LFGA 176
Query: 1032 VNYSKS-DAWTAGTVAYEIFGHDNPFYQS-------------------------ARNTDY 1065
YS S D W+AG + E+ P + + DY
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 1066 E-----------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 1102
+ VN +P+LN R L+ LL+ +P R SAE A
Sbjct: 237 KPYPMYPATTSLVNVVPKLNA----TGRDLLQNLLKCNPVQRISAEEA 280
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFG 1051
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFG 1572
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 926 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
LR+YL L+ ++LLF Q + EG+ +L+ HR+L + N+LLD +L
Sbjct: 105 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDND------RL 155
Query: 985 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1043
V I DFG + G +Y + V APE L + Y SD W+ G
Sbjct: 156 VKIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKEYKFYYASDVWSFG 207
Query: 1044 TVAYEIFGH 1052
YE+ H
Sbjct: 208 VTLYELLTH 216
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQ-LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
LR+YL L+ ++LLF Q + EG+ +L+ HR+L + N+LLD +L
Sbjct: 105 LRDYLPRHSIGLA---QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDND------RL 155
Query: 1506 V-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 1564
V I DFG + G +Y + V APE L + Y SD W+ G
Sbjct: 156 VKIGDFGLAKAVPEG--HEYYRVREDGDSPVFWYAPEC------LKEYKFYYASDVWSFG 207
Query: 1565 TVAYEIFGH 1573
YE+ H
Sbjct: 208 VTLYELLTH 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 196 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 245
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
L + G + + D W+ G YE+ D PFY +
Sbjct: 246 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 282
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD S L + DFG+ NK G+ ++ G ++PEV
Sbjct: 196 HRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEV 245
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
L + G + + D W+ G YE+ D PFY +
Sbjct: 246 -LKSQGGDGYYG-RECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 148
Query: 982 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1037
I DFG + + A + APE +NY KS
Sbjct: 149 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 191
Query: 1038 DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDP 1093
D W+ G + EI H Y N + N N PE + +L+ + P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 1094 SDRPSAELAATVCQ 1107
DRP+ + +V +
Sbjct: 252 EDRPTFDYLRSVLE 265
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 24/147 (16%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 148
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1558
I DFG + + A + APE +NY KS
Sbjct: 149 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 191
Query: 1559 DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
D W+ G + EI H Y N +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 953 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1012
+ HL+ +RDLK +NI+L N + +TDFG S+ + G
Sbjct: 134 LGHLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKE-----SIHDGTVTHXFCG 183
Query: 1013 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQ 1072
+ MAPE+ + + + D W+ G + Y++ PF + N ++ + +
Sbjct: 184 TIEYMAPEILMRSG------HNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTIDKILK 235
Query: 1073 LNTNVPEVM----RRLVAKLLENDPSDRPSA 1099
N+P + R L+ KLL+ + + R A
Sbjct: 236 CKLNLPPYLTQEARDLLKKLLKRNAASRLGA 266
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 1474 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1533
+ HL+ +RDLK +NI+L N + +TDFG S+ + G
Sbjct: 134 LGHLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKE-----SIHDGTVTHXFCG 183
Query: 1534 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
+ MAPE+ + + + D W+ G + Y++ PF R
Sbjct: 184 TIEYMAPEILMRSG------HNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 44/216 (20%)
Query: 856 RNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSL 915
R+E ML ++ HPNVV + T P S+I+ L+
Sbjct: 60 RHEAMLRARLQ----HPNVVCLLGVVTKDQPL----SMIFSYCSHGDLHE---------- 101
Query: 916 FILMKKYNTDLRNYLRERCAQLSMH--ERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
F++M+ ++D+ + +R + ++ + + L Q+ G+ +L+ H H+DL + N+L
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL- 160
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD-IELGGNVAL----MAPEVALATPGL 1028
+ D + + GL + +AD +L GN L MAPE + G
Sbjct: 161 ------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY--GK 206
Query: 1029 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
FS SD W+ G V +E+F + Y N D
Sbjct: 207 FSI----DSDIWSYGVVLWEVFSYGLQPYCGYSNQD 238
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMH--ERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++ F++M+ ++D+ + +R + ++ + + L Q+ G+ +L+ H H+DL +
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATR 157
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD-IELGGNVAL----MAPEVALA 1545
N+L + D + + GL + +AD +L GN L MAPE +
Sbjct: 158 NVL-------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY 204
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
G FS SD W+ G V +E+F + Y N D
Sbjct: 205 --GKFSI----DSDIWSYGVVLWEVFSYGLQPYCGYSNQD 238
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 99 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 156
Query: 982 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1037
I DFG + + A + APE +NY KS
Sbjct: 157 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 199
Query: 1038 DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDP 1093
D W+ G + EI H Y N + N N PE + +L+ + P
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 259
Query: 1094 SDRPSAELAATVCQLYLWA 1112
DRP+ + +V + + A
Sbjct: 260 EDRPTFDYLRSVLEDFFTA 278
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 24/147 (16%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 99 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 156
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1558
I DFG + + A + APE +NY KS
Sbjct: 157 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 199
Query: 1559 DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
D W+ G + EI H Y N +
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPE 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 75/206 (36%), Gaps = 37/206 (17%)
Query: 1483 AHRDLKSDNILLDCSEDNTCPQLVITDF--GSSYTNKSGLSMQYSSADIELGGNVALMAP 1540
AHRDLK +NIL C N + I DF GS S + + G+ MAP
Sbjct: 133 AHRDLKPENIL--CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 1541 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSH 1600
EV A S + + D W+ G + Y + PF + W R
Sbjct: 191 EVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR----------- 238
Query: 1601 SSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDR 1659
P+ N ++S + YE P + ++ + L++KLL D R
Sbjct: 239 GEACPAC--------QNMLFESIQEGKYE---FPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 1660 PSAELAATVCQLYLWAPKHWLYGATP 1685
S AA V Q W+ G P
Sbjct: 288 LS---AAQVLQ------HPWVQGCAP 304
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDF--GSSYTNKSGLSMQYSSADIELGGNVALMAP 1019
AHRDLK +NIL C N + I DF GS S + + G+ MAP
Sbjct: 133 AHRDLKPENIL--CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 1020 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF----------------------- 1056
EV A S + + D W+ G + Y + PF
Sbjct: 191 EVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 1057 YQSARNTDYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKH 1115
++S + YE P + ++ + L++KLL D R S AA V Q
Sbjct: 250 FESIQEGKYE---FPDKDWAHISCAAKDLISKLLVRDAKQRLS---AAQVLQ------HP 297
Query: 1116 WLYGATP 1122
W+ G P
Sbjct: 298 WVQGCAP 304
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 44/216 (20%)
Query: 856 RNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSL 915
R+E ML ++ HPNVV + T P S+I+ L+
Sbjct: 77 RHEAMLRARLQ----HPNVVCLLGVVTKDQPL----SMIFSYCSHGDLHE---------- 118
Query: 916 FILMKKYNTDLRNYLRERCAQLSMH--ERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
F++M+ ++D+ + +R + ++ + + L Q+ G+ +L+ H H+DL + N+L
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL- 177
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD-IELGGNVAL----MAPEVALATPGL 1028
+ D + + GL + +AD +L GN L MAPE + G
Sbjct: 178 ------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY--GK 223
Query: 1029 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
FS SD W+ G V +E+F + Y N D
Sbjct: 224 FSI----DSDIWSYGVVLWEVFSYGLQPYCGYSNQD 255
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMH--ERILLFTQLLEGVTHLNMHRTAHRDLKSD 1490
++ F++M+ ++D+ + +R + ++ + + L Q+ G+ +L+ H H+DL +
Sbjct: 115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATR 174
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD-IELGGNVAL----MAPEVALA 1545
N+L + D + + GL + +AD +L GN L MAPE +
Sbjct: 175 NVL-------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY 221
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1585
G FS SD W+ G V +E+F + Y N D
Sbjct: 222 --GKFSI----DSDIWSYGVVLWEVFSYGLQPYCGYSNQD 255
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 31/185 (16%)
Query: 1473 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1532
G+ +L+ HRDL + N +L +D T + + DFG LS + S D
Sbjct: 159 GMEYLSNRNFLHRDLAARNCML--RDDMT---VCVADFG--------LSKKIYSGDYYRQ 205
Query: 1533 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
G +A M P +A L V SKSD W G +EI Y +N + +
Sbjct: 206 GRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------M 258
Query: 1593 WQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLL 1652
+ +L++ H P E++ S TD L+ V+R + KLL
Sbjct: 259 YDYLLHGHRLKQPEDCLDELY----EIMYSCWRTD-------PLDRPTFSVLRLQLEKLL 307
Query: 1653 ENDPS 1657
E+ P
Sbjct: 308 ESLPD 312
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 952 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1011
G+ +L+ HRDL + N +L +D T + + DFG LS + S D
Sbjct: 159 GMEYLSNRNFLHRDLAARNCML--RDDMT---VCVADFG--------LSKKIYSGDYYRQ 205
Query: 1012 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---DYEVN 1068
G +A M P +A L V SKSD W G +EI Y +N DY ++
Sbjct: 206 GRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
Query: 1069 A--LPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
L Q + E + ++ DP DRP+
Sbjct: 265 GHRLKQPEDCLDE-LYEIMYSCWRTDPLDRPT 295
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Query: 233 GLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY 292
GLS + S D G +A M P +A L V SKSD W G +EI Y
Sbjct: 192 GLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
Query: 293 QSARNT---DYEVNA--LPQLNTNVPEVMRRLVAKLLENDPSDRPS 333
+N DY ++ L Q + E + ++ DP DRP+
Sbjct: 251 PGVQNHEMYDYLLHGHRLKQPEDCLDE-LYEIMYSCWRTDPLDRPT 295
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Query: 674 GLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY 733
GLS + S D G +A M P +A L V SKSD W G +EI Y
Sbjct: 192 GLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
Query: 734 QSARNT---DYEVNA--LPQLNTNVPEVMRRLVAKLLENDPSDRPS 774
+N DY ++ L Q + E + ++ DP DRP+
Sbjct: 251 PGVQNHEMYDYLLHGHRLKQPEDCLDE-LYEIMYSCWRTDPLDRPT 295
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 102 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 160 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 206
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 207 -----YTKSIDIWSVGCILAEML 224
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 106 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 160
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 161 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 210
Query: 1056 FYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
Y N + N N PE + +L+ + P DRP+ + +V +
Sbjct: 211 PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 106 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 160
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 161 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 210
Query: 1577 FYQSARNTD 1585
Y N +
Sbjct: 211 PYPGMTNPE 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFG 1051
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFG 1572
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEMLS 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 923 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 981
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 97 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 154
Query: 982 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1037
I DFG + + A + APE +NY KS
Sbjct: 155 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 197
Query: 1038 DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDP 1093
D W+ G + EI H Y N + N N PE + +L+ + P
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 1094 SDRPSAELAATVCQLYLWA 1112
DRP+ + +V + + A
Sbjct: 258 EDRPTFDYLRSVLEDFFTA 276
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 24/147 (16%)
Query: 1444 NTDLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTC 1502
N L ++L+ +L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C
Sbjct: 97 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSC 154
Query: 1503 PQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS----KS 1558
I DFG + + A + APE +NY KS
Sbjct: 155 K---IADFGLARLIEDNEXTAREGAKFP----IKWTAPEA----------INYGTFTIKS 197
Query: 1559 DAWTAGTVAYEIFGHDNPFYQSARNTD 1585
D W+ G + EI H Y N +
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 107 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 161
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 162 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 211
Query: 1056 FYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
Y N + N N PE + +L+ + P DRP+ + +V +
Sbjct: 212 PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 107 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 161
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 162 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 211
Query: 1577 FYQSARNTD 1585
Y N +
Sbjct: 212 PYPGMTNPE 220
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 159
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1055
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 160 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 209
Query: 1056 FYQSARNTDYEVNALPQLN----TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
Y N + N N PE + +L+ + P DRP+ + +V +
Sbjct: 210 PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+L++++ + + Q+ EG+ + HRDL++ NIL+ S+ +C I DFG +
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--SDTLSCK---IADFGLARLI 159
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ A + APE G F+ KSD W+ G + EI H
Sbjct: 160 EDNEXTAREGAKFP----IKWTAPEA--INYGTFTI----KSDVWSFGILLTEIVTHGRI 209
Query: 1577 FYQSARNTD 1585
Y N +
Sbjct: 210 PYPGMTNPE 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 98 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 156 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 203 -----YTKSIDIWSVGCILAEML 220
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 98 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 156 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 203 -----YTKSIDIWSVGCILAEML 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 46/195 (23%)
Query: 942 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 993
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 109 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 161
Query: 994 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 162 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 1049 IF----------GHDNPFYQSARNTD-----YEVNALPQLNTNVP-----EVMRRLVAKL 1088
+ + PFY N +V + Q N+P + +AKL
Sbjct: 216 VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKL 275
Query: 1089 LENDPSDRPSAELAA 1103
++ PSA L A
Sbjct: 276 MKECWYQNPSARLTA 290
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 1463 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 1514
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 109 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 161
Query: 1515 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 162 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 1570 I 1570
+
Sbjct: 216 V 216
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 209 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 261
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 262 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 306
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 307 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 338
Q N+P + +AKL++ PSA L A
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 650 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 702
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 703 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 747
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 748 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 779
Q N+P + +AKL++ PSA L A
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 120 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 178 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 224
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 225 -----YTKSIDIWSVGCILAEML 242
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 120 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 178 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 224
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 225 -----YTKSIDIWSVGCILAEML 242
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA-RD 199
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP 1576
+ + + L V MAPE LF + +SD W+ G + +EIF
Sbjct: 200 IHHIDXXKKTTNGRL--PVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 1577 FYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIF 1613
Y + L++ L H PS E++
Sbjct: 252 PYPGVPVEE------LFKLLKEGHRMDKPSNCTNELY 282
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
QLS + + Q+ G+ +L + HRDL + N+L+ +EDN + I DFG + +
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV--TEDNV---MKIADFGLA-RD 199
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + + L V MAPE LF + +SD W+ G + +EIF
Sbjct: 200 IHHIDXXKKTTNGRL--PVKWMAPE------ALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 98 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 156 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 203 -----YTKSIDIWSVGCILAEML 220
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 98 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 156 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 203 -----YTKSIDIWSVGCILAEML 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 197
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 198 -----IYKDPDXVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 197
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 198 -----IYKDPDXVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 955 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNV 1014
HL+ +RDLK +NI+L N + +TDFG S+ + G +
Sbjct: 136 HLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKE-----SIHDGTVTHTFCGTI 185
Query: 1015 ALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLN 1074
MAPE+ + + + D W+ G + Y++ PF + N ++ + +
Sbjct: 186 EYMAPEILMRSG------HNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTIDKILKCK 237
Query: 1075 TNVPEVM----RRLVAKLLENDPSDRPSA 1099
N+P + R L+ KLL+ + + R A
Sbjct: 238 LNLPPYLTQEARDLLKKLLKRNAASRLGA 266
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 1476 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNV 1535
HL+ +RDLK +NI+L N + +TDFG S+ + G +
Sbjct: 136 HLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKE-----SIHDGTVTHTFCGTI 185
Query: 1536 ALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
MAPE+ + + + D W+ G + Y++ PF R
Sbjct: 186 EYMAPEILMRSG------HNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 105 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 163 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 209
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 210 -----YTKSIDIWSVGCILAEML 227
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 105 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 163 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 209
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 210 -----YTKSIDIWSVGCILAEML 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 188
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 189 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 188
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 189 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 106 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 163
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 164 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 210
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 211 -----YTKSIDIWSVGCILAEML 228
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 106 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 163
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 164 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 210
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 211 -----YTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 97 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 154
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 155 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 201
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 202 -----YTKSIDIWSVGCILAEML 219
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 97 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 154
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 155 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 201
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 202 -----YTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 208
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 -----YTKSIDIWSVGCILAEML 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
NT L I DFG + + ++ E APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEIMLNSKG------ 208
Query: 1034 YSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 209 YTKSIDIWSVGCILAEML 226
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 104 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
NT L I DFG + + ++ E APE+ L + G
Sbjct: 162 -----NTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEIMLNSKG------ 208
Query: 1555 YSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 209 YTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 105 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
NT L I DFG + + ++ E APE+ L + G
Sbjct: 163 -----NTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEIMLNSKG------ 209
Query: 1034 YSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 210 YTKSIDIWSVGCILAEML 227
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 105 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
NT L I DFG + + ++ E APE+ L + G
Sbjct: 163 -----NTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEIMLNSKG------ 209
Query: 1555 YSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 210 YTKSIDIWSVGCILAEML 227
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLGRLIE 332
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 333 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 375
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 376 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 430
Score = 33.9 bits (76), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLGRLIE 332
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 333 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 375
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 376 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 401
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 402 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 430
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 197
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 198 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 197
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 198 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
T+L +++ + R HRD+K +N+LL + +L I DFG S S S
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLL-----GSNGELKIADFGWSVHAPS------SRR 167
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
D L G + + PE+ ++ K D W+ G + YE PF Y
Sbjct: 168 DT-LCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1067 VNALPQLN--TNVPEVMRRLVAKLLENDPSDR 1096
+ + V E R L+++LL+++ S R
Sbjct: 221 RISRVEFTFPDFVTEGARDLISRLLKHNASQR 252
Score = 37.4 bits (85), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
T+L +++ + R HRD+K +N+LL + +L I DFG S S S
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLL-----GSNGELKIADFGWSVHAPS------SRR 167
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
D L G + + PE+ ++ K D W+ G + YE PF
Sbjct: 168 DT-LCGTLDYLPPEMIEGR------MHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 108 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 165
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 166 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 212
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 213 -----YTKSIDIWSVGCILAEML 230
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 108 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 165
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 166 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 212
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 213 -----YTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 974 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEML 222
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++I+ TDL L+ + LS Q+L G+ +++ HRDLK N+LL
Sbjct: 100 DVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 1495 DCSEDNTCPQLVITDFGSSYT-----NKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
NT L I DFG + + +G +Y + APE+ L + G
Sbjct: 158 -----NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR-------WYRAPEIMLNSKG- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
Y+KS D W+ G + E+
Sbjct: 205 -----YTKSIDIWSVGCILAEML 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 234
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 235 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 281
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 234
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 235 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 188
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 189 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 188
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 189 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 199
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 246
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 199
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 246
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 242
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 243 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 289
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 242
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 243 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 289
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 969
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HR+L +
Sbjct: 87 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRNLATR 144
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
NIL++ ++ I DFG T +Y + APE T F
Sbjct: 145 NILVENEN-----RVKIGDFG--LTKVLPQDKEYYKVKEPGESPIFWYAPES--LTESKF 195
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
S SD W+ G V YE+F
Sbjct: 196 SVA----SDVWSFGVVLYELF 212
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSD 1490
RN+ L + Y + LR+YL++ ++ H ++L +T Q+ +G+ +L R HR+L +
Sbjct: 87 RNLKLIMEYLPYGS-LRDYLQKHKERID-HIKLLQYTSQICKGMEYLGTKRYIHRNLATR 144
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
NIL++ ++ I DFG T +Y + APE T F
Sbjct: 145 NILVENEN-----RVKIGDFG--LTKVLPQDKEYYKVKEPGESPIFWYAPES--LTESKF 195
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
S SD W+ G V YE+F
Sbjct: 196 SVA----SDVWSFGVVLYELF 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 46/195 (23%)
Query: 942 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 993
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 138 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 190
Query: 994 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 191 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
Query: 1049 IF----------GHDNPFYQSARNTD-----YEVNALPQLNTNVP-----EVMRRLVAKL 1088
+ + PFY N +V + Q N+P + +AKL
Sbjct: 245 VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKL 304
Query: 1089 LENDPSDRPSAELAA 1103
++ PSA L A
Sbjct: 305 MKECWYQNPSARLTA 319
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 1463 RILLFTQLLEGVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 1514
RI+L + G+ HL++ AHRDLKS NIL+ + Q I D G +
Sbjct: 138 RIVL--SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----GQCCIADLGLAV 190
Query: 1515 TNKSGLSMQYSSADIELGGNVAL-----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ S+ +++G N + MAPEV T + F +Y + D W G V +E
Sbjct: 191 MHSQ------STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
Query: 1570 I 1570
+
Sbjct: 245 V 245
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 209 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 261
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 262 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 306
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 282
Query: 307 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 338
Q N+P + +AKL++ PSA L A
Sbjct: 283 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 319
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 650 IYPKDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVALATP 702
I +D +++ G GL++ +S + +L G MAPEV T
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 703 GLFSFVNYSKSDAWTAGTVAYEIF----------GHDNPFYQSARNTD-----YEVNALP 747
+ F +Y + D W G V +E+ + PFY N +V +
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 282
Query: 748 QLNTNVP-----EVMRRLVAKLLENDPSDRPSAELAA 779
Q N+P + +AKL++ PSA L A
Sbjct: 283 QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 319
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 240
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 241 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 287
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 240
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 241 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 287
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 247
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 248 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 294
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 247
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 248 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 294
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 249
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 250 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 296
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARD-- 249
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 250 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 296
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 21/184 (11%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +LR+ Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 128 NGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV-----NSNL 182
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + V P + + S SD W+
Sbjct: 183 VCKVSDFGLSRVIEDDPEAVYTTT----GGKIP-----VRWTAPEAIQYRKFTSASDVWS 233
Query: 1042 AGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
G V +E+ + Y N D E LP + P + +L+ + + ++R
Sbjct: 234 YGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPA-PMDCPAGLHQLMLDCWQKERAER 292
Query: 1097 PSAE 1100
P E
Sbjct: 293 PKFE 296
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +LR+ Q ++ + + + + G+ +L HRDL + NIL+ N+
Sbjct: 128 NGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV-----NSNL 182
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + V P + + S SD W+
Sbjct: 183 VCKVSDFGLSRVIEDDPEAVYTTT----GGKIP-----VRWTAPEAIQYRKFTSASDVWS 233
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 234 YGIVMWEVMSYGERPYWDMSNQD 256
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 200
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPE 1079
L V + SD W+ G V +EI YQ N + L Q + N PE
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPE 259
Query: 1080 VMRRLVAKLLENDPSDRPS 1098
+ L+ + +P+ RP+
Sbjct: 260 RVTDLMRMCWQFNPNMRPT 278
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 200
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
L V + SD W+ G V +EI YQ N
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ CA+L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ CA+L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1000
Q+ EG+ ++ HRDL++ N+L+ SE C I DFG + YT + G
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLV--SESLMCK---IADFGLARVIEDNEYTAREGAK 172
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ APE G F+ KSD W+ G + YEI + Y
Sbjct: 173 FP-----------IKWTAPEA--INFGCFTI----KSDVWSFGILLYEIVTYGKIPYPGR 215
Query: 1061 RNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
N D + AL Q N P+ + ++ + +RP+ + +V
Sbjct: 216 TNADV-MTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSV 264
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1521
Q+ EG+ ++ HRDL++ N+L+ SE C I DFG + YT + G
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLV--SESLMCK---IADFGLARVIEDNEYTAREGAK 172
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
+ APE G F+ KSD W+ G + YEI + Y
Sbjct: 173 FP-----------IKWTAPEA--INFGCFTI----KSDVWSFGILLYEIVTYGKIPYPGR 215
Query: 1582 RNTD 1585
N D
Sbjct: 216 TNAD 219
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 200
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPE 1079
L V + SD W+ G V +EI YQ N + L Q + N PE
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPE 259
Query: 1080 VMRRLVAKLLENDPSDRPS 1098
+ L+ + +P RP+
Sbjct: 260 RVTDLMRMCWQFNPKMRPT 278
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 200
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
L V + SD W+ G V +EI YQ N
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 87 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 141
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 142 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 189
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSE 213
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 87 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 141
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 142 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 189
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 990
+L++++ + + Q+ EG+ + HR+L++ NIL+ S+ +C I DFG
Sbjct: 101 KLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILV--SDTLSCK---IADFGLARLI 155
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 156 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 198
Query: 1049 IFGHDNPFYQSARNTDYEVNALPQLNT----NVPEVMRRLVAKLLENDPSDRPSAELAAT 1104
I H Y N + N N PE + +L+ + P DRP+ + +
Sbjct: 199 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 258
Query: 1105 VCQLYLWA 1112
V + + A
Sbjct: 259 VLEDFFTA 266
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG----- 1511
+L++++ + + Q+ EG+ + HR+L++ NIL+ S+ +C I DFG
Sbjct: 101 KLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILV--SDTLSCK---IADFGLARLI 155
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
+ YT + G + APE G F+ KSD W+ G + E
Sbjct: 156 EDNEYTAREGAKFP-----------IKWTAPEA--INYGTFTI----KSDVWSFGILLTE 198
Query: 1570 IFGHDNPFYQSARNTD 1585
I H Y N +
Sbjct: 199 IVTHGRIPYPGMTNPE 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 142
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 143 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 190
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSE 214
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 142
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 143 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 190
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 940 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 996
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAC 177
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNP 1055
+ M APEV L + Y+ + D W+ G + E+
Sbjct: 178 TNFMMTPYVV------TRYYRAPEVILG-------MGYAANVDIWSVGCIMGELV-KGCV 223
Query: 1056 FYQSARNTDYEVNALPQLNTNVPEVMRRL---VAKLLENDPS 1094
+Q + D + QL T E M L V +EN P
Sbjct: 224 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPK 265
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 1461 HERI-LLFTQLLEGVTHLNMHRTAHRDLKSDNILL--DCSEDNTCPQLVITDFGSSYTNK 1517
HER+ L Q+L G+ HL+ HRDLK NI++ DC+ L I DFG + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTAC 177
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNP 1576
+ M APEV L + Y+ + D W+ G + E+
Sbjct: 178 TNFMMTPYVV------TRYYRAPEVILG-------MGYAANVDIWSVGCIMGELV-KGCV 223
Query: 1577 FYQSARNTDYWHR 1589
+Q + D W++
Sbjct: 224 IFQGTDHIDQWNK 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
A + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEXTARQGAKF----PIKWTAPEAALY--GRFTI----KSDVWSFGILLTELTTKGRVP 215
Query: 1057 YQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 216 YPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 73/206 (35%), Gaps = 53/206 (25%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG + +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 165
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
A + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEXTARQGAKF----PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL------- 208
Query: 1578 YQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLN 1637
TT V Y + Q R Y + P+
Sbjct: 209 -------------------------TTKGRVPYPGMVNREVLDQVERG--YRMPCPPE-- 239
Query: 1638 TNVPEVMRRLVAKLLENDPSDRPSAE 1663
PE + L+ + DP +RP+ E
Sbjct: 240 --CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRXIQRRD 193
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 S-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRXIQRRD 193
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 S-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRTIQRRD 193
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 S-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRTIQRRD 193
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 S-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 29/178 (16%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ + LS L QLL G+ +++ HRDLK N+ +
Sbjct: 107 EVYLVTTLMGADLNNIVKSQA--LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DF GL+ Q AD E+ G VA APE+ L +
Sbjct: 165 -----NEDSELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML------N 202
Query: 1031 FVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAK 1087
+++Y+++ D W+ G + E+ + + D + + T PEV+ ++ ++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ + LS L QLL G+ +++ HRDLK N+ +
Sbjct: 107 EVYLVTTLMGADLNNIVKSQA--LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DF GL+ Q AD E+ G VA APE+ L +
Sbjct: 165 -----NEDSELRILDF--------GLARQ---ADEEMTGYVATRWYRAPEIML------N 202
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 92 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 151
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1024
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 152 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 197
Query: 1025 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPE 1079
L V + SD W+ G V +EI YQ N + L Q + N PE
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPE 256
Query: 1080 VMRRLVAKLLENDPSDRPS 1098
+ L+ + +P RP+
Sbjct: 257 RVTDLMRMCWQFNPKMRPT 275
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 92 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 151
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 1545
DL + N ++ + D T + I DF G++ D G L+ P +A
Sbjct: 152 DLAARNCMV--AHDFT---VKIGDF--------GMTRDIXETDXXRKGGKGLL-PVRWMA 197
Query: 1546 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
L V + SD W+ G V +EI YQ N
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKICDFGLARD-- 193
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 194 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 240
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKICDFGLARD-- 193
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 194 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L +L++ Q ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 107 NGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILI-----NSNL 161
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1041
++DFG S + Y++ GG + + P +F + S SD W+
Sbjct: 162 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAFRKFTSASDVWS 212
Query: 1042 AGTVAYEIFGHDNPFYQSARNTD 1064
G V +E+ + Y N D
Sbjct: 213 YGIVMWEVVSYGERPYWEMTNQD 235
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L +L++ Q ++ + + + + G+ +L+ HRDL + NIL+ N+
Sbjct: 107 NGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILI-----NSNL 161
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWT 1562
++DFG S + Y++ GG + + P +F + S SD W+
Sbjct: 162 VCKVSDFGLSRVLEDDPEAAYTTR----GGKIP-----IRWTAPEAIAFRKFTSASDVWS 212
Query: 1563 AGTVAYEIFGHDNPFYQSARNTD 1585
G V +E+ + Y N D
Sbjct: 213 YGIVMWEVVSYGERPYWEMTNQD 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 137
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 138 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 185
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSE 209
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 137
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 138 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 185
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 94 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 148
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 149 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 196
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSE 220
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 94 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 148
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 149 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 196
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 37/149 (24%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
S++I+ + TDL N L E+ L H R+ ++ QLL G+ +++ HRDLK N+ +
Sbjct: 96 SVYIVQEYMETDLANVL-EQGPLLEEHARLFMY-QLLRGLKYIHSANVLHRDLKPANLFI 153
Query: 974 DCSEDNTCPQLVITDFGSS------YTNKSGLSMQ-----YSSADIELGGNVALMAPEVA 1022
+ +ED L I DFG + Y++K LS Y S + L N
Sbjct: 154 N-TEDLV---LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPN--------- 200
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIF 1050
NY+K+ D W AG + E+
Sbjct: 201 ----------NYTKAIDMWAAGCIFAEML 219
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 37/149 (24%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
S++I+ + TDL N L E+ L H R+ ++ QLL G+ +++ HRDLK N+ +
Sbjct: 96 SVYIVQEYMETDLANVL-EQGPLLEEHARLFMY-QLLRGLKYIHSANVLHRDLKPANLFI 153
Query: 1495 DCSEDNTCPQLVITDFGSS------YTNKSGLSMQ-----YSSADIELGGNVALMAPEVA 1543
+ +ED L I DFG + Y++K LS Y S + L N
Sbjct: 154 N-TEDLV---LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPN--------- 200
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
NY+K+ D W AG + E+
Sbjct: 201 ----------NYTKAIDMWAAGCIFAEML 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 993
L+M + I Q+ +G+ +L + HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 994 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF--- 1050
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--XVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 1051 GHDNPFYQSARNTD-YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G+ P R + + + N E M RL+ + + +P RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 1514
L+M + I Q+ +G+ +L + HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 1515 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--XVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 157
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 158 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 205
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 157
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ +G V PEV + + FS SKSD W
Sbjct: 158 VVKVSDFGLS---RYVLDDEYTSS---VGSKFPVRWSPPEVLMYSK--FS----SKSDIW 205
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL + NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILV--GENLVCK---VADFGLARLIE 165
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + DP +RP+ E
Sbjct: 209 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 74/213 (34%), Gaps = 67/213 (31%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL + NIL+ E+ C + DFG
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILV--GENLVCK---VADFGLARLIE 165
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 166 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 208
Query: 1571 FGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEV 1630
TT V Y + Q R Y +
Sbjct: 209 --------------------------------TTKGRVPYPGMVNREVLDQVERG--YRM 234
Query: 1631 NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1663
P+ PE + L+ + DP +RP+ E
Sbjct: 235 PCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N +
Sbjct: 112 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRTXIQRR 166
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 167 DS----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 216
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N +
Sbjct: 112 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRTXIQRR 166
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
S G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 167 DS----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 93/240 (38%), Gaps = 59/240 (24%)
Query: 871 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 930
HPN+V+ A T P L+ Y SL+ L+ K
Sbjct: 93 HPNIVLFMGAVTQ----------------PPNLSIVTEYLSRGSLYRLLHKSGA------ 130
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCPQLVITD 988
RE QL R+ + + +G+ +L+ HRDLKS N+L+D + + D
Sbjct: 131 RE---QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY-----TVKVCD 182
Query: 989 FGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
FG S S +A G MAPEV P + KSD ++ G + +E
Sbjct: 183 FGLSRLKASXFLXSKXAA-----GTPEWMAPEVLRDEP------SNEKSDVYSFGVILWE 231
Query: 1049 I------FGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLE----NDPSDRPS 1098
+ +G+ NP Q ++ L +P + VA ++E N+P RPS
Sbjct: 232 LATLQQPWGNLNP-AQVVAAVGFKCKRL-----EIPRNLNPQVAAIIEGCWTNEPWKRPS 285
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 98/262 (37%), Gaps = 64/262 (24%)
Query: 1319 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYS-AASNSHAILKAMSXXXXXXXXXXXX 1377
+ I + I G+ V+ A + G + A+K++ A + L+ ++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA------------ 86
Query: 1378 XXDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLF 1437
+M + HPN+V+ A T P L+ Y SL+
Sbjct: 87 ----IMKRLR----HPNIVLFMGAVTQ----------------PPNLSIVTEYLSRGSLY 122
Query: 1438 ILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLD 1495
L+ K RE QL R+ + + +G+ +L+ HRDLKS N+L+D
Sbjct: 123 RLLHKSGA------RE---QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVD 173
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
+ + DFG S S +A G MAPEV P +
Sbjct: 174 KKY-----TVKVCDFGLSRLKASXFLXSKXAA-----GTPEWMAPEVLRDEP------SN 217
Query: 1556 SKSDAWTAGTVAYEIFGHDNPF 1577
KSD ++ G + +E+ P+
Sbjct: 218 EKSDVYSFGVILWELATLQQPW 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 122/317 (38%), Gaps = 85/317 (26%)
Query: 796 ATPSHNEIMQWLLTLTTKVLCTGVSYGG-----HVRRTFVEYQLISTFLKRAEFRLITNA 850
A PSH E++ KVL G S+G V R + LK+A ++
Sbjct: 25 ADPSHFELL--------KVLGQG-SFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 851 LQYIQRNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYG 910
++R D+L + HP VV +H+AF +L +
Sbjct: 76 RTKMER--DILADV-----NHPFVVKLHYAFQ----------------TEGKLYLILDFL 112
Query: 911 RNMSLFILMKKY----NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
R LF + K D++ YL A+L++ G+ HL+ +RDL
Sbjct: 113 RGGDLFTRLSKEVMFTEEDVKFYL----AELAL------------GLDHLHSLGIIYRDL 156
Query: 967 KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 1026
K +NILLD + +TDFG S ++ + G V MAPEV
Sbjct: 157 KPENILLDEE-----GHIKLTDFGLSKE-----AIDHEKKAYSFCGTVEYMAPEVV---- 202
Query: 1027 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVN-----ALPQ-LNTNVPE 1079
+ +S S D W+ G + +E+ PF R + +PQ L+T
Sbjct: 203 ---NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQS 259
Query: 1080 VMRRLVAKLLENDPSDR 1096
++R L + +P++R
Sbjct: 260 LLR----ALFKRNPANR 272
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
+L G+ HL+ +RDLK +NILLD + +TDFG S ++ +
Sbjct: 136 LAELALGLDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----AIDHEK 185
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARN 1583
G V MAPEV + +S S D W+ G + +E+ PF R
Sbjct: 186 KAYSFCGTVEYMAPEVV-------NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRK 236
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 104 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 158
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 159 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 201
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 202 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 256
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 104 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 158
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 159 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 201
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
G+++ L + + L LR++ S E + + + V +L+ HRDLK
Sbjct: 93 GKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 970 NIL-LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAP--EVALATP 1026
NIL +D S + C L I DF G + Q + N LM P P
Sbjct: 151 NILYVDESGNPEC--LRICDF--------GFAKQLRAE------NGLLMTPCYTANFVAP 194
Query: 1027 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--------NALPQLNTN- 1076
+ Y + D W+ G + Y + PF +T E+ L N N
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 1077 VPEVMRRLVAKLLENDPSDRPSAE 1100
V E + LV+K+L DP R +A+
Sbjct: 255 VSETAKDLVSKMLHVDPHQRLTAK 278
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSD 969
G+++ L + + L LR++ S E + + + V +L+ HRDLK
Sbjct: 93 GKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 970 NIL-LDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAP--EVALATP 1026
NIL +D S + C L I DF G + Q + N LM P P
Sbjct: 151 NILYVDESGNPEC--LRICDF--------GFAKQLRAE------NGLLMTPCYTANFVAP 194
Query: 1027 GLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--------NALPQLNTN- 1076
+ Y + D W+ G + Y + PF +T E+ L N N
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 1077 VPEVMRRLVAKLLENDPSDRPSAE 1100
V E + LV+K+L DP R +A+
Sbjct: 255 VSETAKDLVSKMLHVDPHQRLTAK 278
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 22/191 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L+ +M+ N Y ++ + + ++ G+ L +RDLK DN++LD
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 975 CSEDNTCPQLVITDFGSSYTNK-SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
+ I DFG N G++ + G +APE+ P
Sbjct: 156 SE-----GHIKIADFGMCKENIWDGVTTK------XFCGTPDYIAPEIIAYQP------- 197
Query: 1034 YSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLEND 1092
Y KS D W G + YE+ PF + D ++ + N P+ M + + +
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL 255
Query: 1093 PSDRPSAELAA 1103
+ P L
Sbjct: 256 MTKHPGKRLGC 266
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 20/144 (13%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L+ +M+ N Y ++ + + ++ G+ L +RDLK DN++LD
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 1496 CSEDNTCPQLVITDFGSSYTNK-SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
+ I DFG N G++ + G +APE+ P
Sbjct: 156 SE-----GHIKIADFGMCKENIWDGVTTK------XFCGTPDYIAPEIIAYQP------- 197
Query: 1555 YSKS-DAWTAGTVAYEIFGHDNPF 1577
Y KS D W G + YE+ PF
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 108 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 162
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 163 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 210
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 211 DSCQEYSDWKEK 222
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 108 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 162
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 163 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 995
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 1516
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 995
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 190
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 191 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 1516
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 190
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 191 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 162
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 163 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 205
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 206 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 260
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 162
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 163 DNEYTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKIXDFGLARD-- 193
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 194 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 240
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKIXDFGLARD-- 193
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
Y D G+ L MAPE +F V +SD W+ G + +EIF
Sbjct: 194 -----IYKDPDYVRKGDARLPLKWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 995
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 190
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 191 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 1516
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 190
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 191 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 995
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 1516
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 993
L+M + I Q+ +G+ +L + HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 994 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF--- 1050
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--YVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 1051 GHDNPFYQSARNTD-YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G+ P R + + + N E M RL+ + + +P RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 1514
L+M + I Q+ +G+ +L + HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 1515 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--YVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+LE V +L+ + HRDLK +N+L + L I DFG S + + M+
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDA--PLKIADFGLSKIVEHQVLMK----- 208
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWH 1588
+ G APE+ L + D W+ G + Y + PFY R +
Sbjct: 209 -TVCGTPGYCAPEI------LRGCAYGPEVDMWSVGIITYILLCGFEPFYDE-RGDQFMF 260
Query: 1589 RKWL 1592
R+ L
Sbjct: 261 RRIL 264
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+LE V +L+ + HRDLK +N+L + L I DFG S + + M+
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDA--PLKIADFGLSKIVEHQVLMK----- 208
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY 1057
+ G APE+ L + D W+ G + Y + PFY
Sbjct: 209 -TVCGTPGYCAPEI------LRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ + D T + I DFG + Y K G + V M
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 199
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQ 1072
APE G+F+ + SD W+ G V +EI YQ N + L Q
Sbjct: 200 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 1073 LNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ N PE + L+ + +P RP+
Sbjct: 254 PD-NCPERVTDLMRMCWQFNPKMRPT 278
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ + D T + I DFG + Y K G + V M
Sbjct: 155 DLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 199
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
APE G+F+ + SD W+ G V +EI YQ N
Sbjct: 200 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 158
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 158
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MXGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 159
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 159
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 49/208 (23%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 130 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 187
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 188 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 224
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTV 1608
++++Y+ + D W+ G + E+ F TD H L Q + + T P++V
Sbjct: 225 -NWMHYNMTVDIWSVGCIMAELLTGRTLF----PGTD--HINQLQQ--IMRLTGTPPASV 275
Query: 1609 AYEIFGHDNPFYQSARNTDYEVNALPQL 1636
+ H+ ARN +N+LPQ+
Sbjct: 276 ISRMPSHE------ARNY---INSLPQM 294
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 130 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 187
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 188 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 224
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+ + D W+ G + E+
Sbjct: 225 -NWMHYNMTVDIWSVGCIMAELL 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1006
Q LEG+ +L+ R H D+K+DN+LL S D + + DFG + GL +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL--SSDGS--HAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
D + G MAPEV L +K D W++ + + +P+ Q R
Sbjct: 249 DY-IPGTETHMAPEVVLGRSC------DAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1527
Q LEG+ +L+ R H D+K+DN+LL S D + + DFG + GL +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL--SSDGS--HAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
D + G MAPEV L +K D W++ + + +P+ Q R
Sbjct: 249 DY-IPGTETHMAPEVVLGRSC------DAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 112 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 153
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 154 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 112 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 153
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 154 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 161
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 161
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1006
Q LEG+ +L+ R H D+K+DN+LL S D + + DFG + GL +
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL--SSDGS--HAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1061
D + G MAPEV L +K D W++ + + +P+ Q R
Sbjct: 230 DY-IPGTETHMAPEVVLGRSC------DAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSA 1527
Q LEG+ +L+ R H D+K+DN+LL S D + + DFG + GL +
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL--SSDGS--HAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR 1582
D + G MAPEV L +K D W++ + + +P+ Q R
Sbjct: 230 DY-IPGTETHMAPEVVLGRSC------DAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 114 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 168
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 169 CDFGSAKQLVRGEP------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 216
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 217 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 254
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 114 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 168
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 169 CDFGSAKQLVRGEP------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 216
Query: 1567 AYEIF 1571
E+
Sbjct: 217 LAELL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 994
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1052
SG + G APE+ + + ++S D ++ G V Y I
Sbjct: 196 LDSG-QXXFRXNLNNPSGTSGWRAPELLEES----TKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 1053 DNPF---YQSARNTDYEVNALPQL----NTNVPEVMRRLVAKLLENDPSDRPSA 1099
+PF Y N + +L ++ + ++ L+++++++DP RP+A
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 304
Score = 37.7 bits (86), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 1515
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 1516 NKSG 1519
SG
Sbjct: 196 LDSG 199
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 429
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 429
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 142
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1040
+ ++DFG S + L +Y+S+ G V PEV + + FS SKSD W
Sbjct: 143 VVKVSDFGLS---RYVLDDEYTSSR---GSKFPVRWSPPEVLMYSK--FS----SKSDIW 190
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSE 214
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 88 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 142
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGN--VALMAPEVALATPGLFSFVNYSKSDAW 1561
+ ++DFG S + L +Y+S+ G V PEV + + FS SKSD W
Sbjct: 143 VVKVSDFGLS---RYVLDDEYTSSR---GSKFPVRWSPPEVLMYSK--FS----SKSDIW 190
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F QL++G+ +L+ H+D+K N+LL T L I+ G + ++ +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLL-----TTGGTLKISALGVAE------ALHPFA 163
Query: 1006 ADIEL---GGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI------FGHDNPF 1056
AD G+ A PE+A GL +F + K D W+AG Y I F DN
Sbjct: 164 ADDTCRTSQGSPAFQPPEIA---NGLDTFSGF-KVDIWSAGVTLYNITTGLYPFEGDN-I 218
Query: 1057 YQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
Y+ N A+P + + L+ +LE +P+ R
Sbjct: 219 YKLFENIGKGSYAIP---GDCGPPLSDLLKGMLEYEPAKR 255
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F QL++G+ +L+ H+D+K N+LL T L I+ G + ++ +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLL-----TTGGTLKISALGVAE------ALHPFA 163
Query: 1527 ADIEL---GGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
AD G+ A PE+A GL +F + K D W+AG Y I PF
Sbjct: 164 ADDTCRTSQGSPAFQPPEIA---NGLDTFSGF-KVDIWSAGVTLYNITTGLYPF 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 94 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 153
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
DL + N ++ + D T + I DFG + Y K G + V M
Sbjct: 154 DLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 198
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQ 1072
APE G+F+ + SD W+ G V +EI YQ N + L Q
Sbjct: 199 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 252
Query: 1073 LNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ N PE + L+ + +P RP+
Sbjct: 253 PD-NCPERVTDLMRMCWQFNPKMRPT 277
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 94 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 153
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
DL + N ++ + D T + I DFG + Y K G + V M
Sbjct: 154 DLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 198
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
APE G+F+ + SD W+ G V +EI YQ N
Sbjct: 199 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSN 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 375 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 429
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 331
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 332 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 374
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEK 182
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
G V MAPEV + +D W+ G + +E+ PF ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPF--QGKDRKE 234
Query: 1066 EVNALPQLNTNVPEVM----RRLVAKLLENDPSDRPSA 1099
+ + + +P+ + + L+ L + +P++R A
Sbjct: 235 TMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGA 272
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEK 182
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G V MAPEV + +D W+ G + +E+ PF R
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEK 181
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY 1065
G V MAPEV + +D W+ G + +E+ PF ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPF--QGKDRKE 233
Query: 1066 EVNALPQLNTNVPEVM----RRLVAKLLENDPSDRPSA 1099
+ + + +P+ + + L+ L + +P++R A
Sbjct: 234 TMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGA 271
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEK 181
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G V MAPEV + +D W+ G + +E+ PF R
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 994
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 995 NKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH- 1052
SG + G APE+ + + ++S D ++ G V Y I
Sbjct: 196 LDSG-QXXFRXNLNNPSGTSGWRAPELLEES----TKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 1053 DNPF---YQSARNTDYEVNALPQL----NTNVPEVMRRLVAKLLENDPSDRPSA 1099
+PF Y N + +L ++ + ++ L+++++++DP RP+A
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 304
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ--------LVITDFGSSYT 1515
I L Q+ GV HL+ + HRDLK NIL+ S T Q ++I+DFG
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 1516 NKSG 1519
SG
Sbjct: 196 LDSG 199
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMXGXVATRWYRAPEIML----- 215
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMXGXVATRWYRAPEIML----- 215
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 22/191 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
L+ +M+ N Y ++ + + ++ G+ L +RDLK DN++LD
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 975 CSEDNTCPQLVITDFGSSYTNK-SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
SE + + I DFG N G++ + G +APE+ P
Sbjct: 477 -SEGH----IKIADFGMCKENIWDGVTTKX------FCGTPDYIAPEIIAYQP------- 518
Query: 1034 YSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLEND 1092
Y KS D W G + YE+ PF + D ++ + N P+ M + + +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL 576
Query: 1093 PSDRPSAELAA 1103
+ P L
Sbjct: 577 MTKHPGKRLGC 587
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 20/144 (13%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
L+ +M+ N Y ++ + + ++ G+ L +RDLK DN++LD
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 1496 CSEDNTCPQLVITDFGSSYTNK-SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
SE + + I DFG N G++ + G +APE+ P
Sbjct: 477 -SEGH----IKIADFGMCKENIWDGVTTKX------FCGTPDYIAPEIIAYQP------- 518
Query: 1555 YSKS-DAWTAGTVAYEIFGHDNPF 1577
Y KS D W G + YE+ PF
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 164
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 164
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 111 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 165
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 166 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 213
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 214 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 251
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 111 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 165
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 166 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 213
Query: 1567 AYEIF 1571
E+
Sbjct: 214 LAELL 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.009, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQY 1003
LF Q+LE +++++ HR+LK NI +D S + + I DFG + ++S ++
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRN-----VKIGDFGLAKNVHRSLDILKL 175
Query: 1004 SSADIELGGN--VALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSA 1060
S ++ + + + +AT L +Y+ K D ++ G + +E PF
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGX 232
Query: 1061 RNTD-------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 1099
+ + P + N +V ++++ L+++DP+ RP A
Sbjct: 233 ERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGA 278
Score = 33.1 bits (74), Expect = 1.5, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 45/200 (22%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
LF Q+LE +++++ HR+LK NI +D S + + I DFG
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRN-----VKIGDFG-------------- 161
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF---GHDNPFYQSAR 1582
L NV + L + L + S TA VA E+ GH N
Sbjct: 162 -----LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYN------E 210
Query: 1583 NTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPE 1642
D + ++ +Y S+ + R+ E P + N +
Sbjct: 211 KIDXYSLGIIFFEXIYPFSTGXERV----------NILKKLRSVSIEFP--PDFDDNKXK 258
Query: 1643 VMRRLVAKLLENDPSDRPSA 1662
V ++++ L+++DP+ RP A
Sbjct: 259 VEKKIIRLLIDHDPNKRPGA 278
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 213 DSCQEYSDWKEK 224
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 164
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 165 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 197
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 197
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 952 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 184
Query: 1004 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 1473 GVTHLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
G+ HL+M AHRDLKS NIL+ ++ TC I D G L++++
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTC---CIADLG--------LAVRH 184
Query: 1525 SSAD--IELG-----GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
SA I++ G MAPEV + + F ++ ++D + G V +EI
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 213 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 164
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 165 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 1567 AYEIF 1571
E+
Sbjct: 213 LAELL 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.009, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q++ G+ + H HRD+K +NIL+ S + + DFG + T L+ D
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSG-----VVKLCDFGFART----LAAPGEVYD 182
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
E+ APE+ L V Y K+ D W G + E+F + F + +
Sbjct: 183 DEVATR-WYRAPEL------LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDY-EVNALPQLNTNVPEVMRR 1646
H +L+ H E+F + NP + R + E L + + EV+
Sbjct: 236 HIMMCLGNLIPRHQ---------ELF-NKNPVFAGVRLPEIKEREPLERRYPKLSEVVID 285
Query: 1647 LVAKLLENDPSDRP-SAEL 1664
L K L DP RP AEL
Sbjct: 286 LAKKCLHIDPDKRPFCAEL 304
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 73/190 (38%), Gaps = 53/190 (27%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q++ G+ + H HRD+K +NIL+ S + + DFG + T L+ D
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSG-----VVKLCDFGFART----LAAPGEVYD 182
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD-- 1064
E+ APE+ L V Y K+ D W G + E+F P + + D
Sbjct: 183 DEVATR-WYRAPEL------LVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQL 234
Query: 1065 YEV-----NALPQ----LNTN-------VPEVMRR----------------LVAKLLEND 1092
Y + N +P+ N N +PE+ R L K L D
Sbjct: 235 YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294
Query: 1093 PSDRP-SAEL 1101
P RP AEL
Sbjct: 295 PDKRPFCAEL 304
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGXVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGXVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 916 FILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+I+M+ Y +L +YL L + +L Q+ + + +L HRD+ NIL+
Sbjct: 100 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 159
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E C +L DFG S +Y + +V + + +P +F +
Sbjct: 160 SPE---CVKL--GDFGLS---------RYIEDEDYYKASVTRLP--IKWMSPESINFRRF 203
Query: 1035 -SKSDAWTAGTVAYEI--FGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVA 1086
+ SD W +EI FG PF+ N D + + LP+ + P V+ L+
Sbjct: 204 TTASDVWMFAVCMWEILSFGK-QPFFW-LENKDVIGVLEKGDRLPKPDL-CPPVLYTLMT 260
Query: 1087 KLLENDPSDRPS-AELAATVCQLY 1109
+ + DPSDRP EL ++ +Y
Sbjct: 261 RCWDYDPSDRPRFTELVCSLSDVY 284
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 176
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 177 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 224
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 225 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 262
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 176
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 177 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 224
Query: 1567 AYEIF 1571
E+
Sbjct: 225 LAELL 229
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 916 FILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+I+M+ Y +L +YL L + +L Q+ + + +L HRD+ NIL+
Sbjct: 84 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 143
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E C +L DFG S +Y + +V + + +P +F +
Sbjct: 144 SPE---CVKL--GDFGLS---------RYIEDEDYYKASVTRLP--IKWMSPESINFRRF 187
Query: 1035 -SKSDAWTAGTVAYEI--FGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVA 1086
+ SD W +EI FG PF+ N D + + LP+ + P V+ L+
Sbjct: 188 TTASDVWMFAVCMWEILSFGK-QPFFW-LENKDVIGVLEKGDRLPKPDL-CPPVLYTLMT 244
Query: 1087 KLLENDPSDRPS-AELAATVCQLY 1109
+ + DPSDRP EL ++ +Y
Sbjct: 245 RCWDYDPSDRPRFTELVCSLSDVY 268
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1521
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ-- 1579
+ + G + +APE+ + D W+ G V + + P+ Q
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Query: 1580 -SARNTDYWHRK 1590
S + W K
Sbjct: 212 DSCQEYSDWKEK 223
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS----YTNKSGLS 1000
F QL+ GV +L+ HRD+K +N+LLD DN L I+DFG + Y N+ L
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDN----LKISDFGLATVFRYNNRERLL 163
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ + G + +APE+ + D W+ G V + + P+ Q +
Sbjct: 164 NK-------MCGTLPYVAPELLKRRE-----FHAEPVDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 916 FILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
+I+M+ Y +L +YL L + +L Q+ + + +L HRD+ NIL+
Sbjct: 88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 147
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1034
E C +L DFG S +Y + +V + + +P +F +
Sbjct: 148 SPE---CVKL--GDFGLS---------RYIEDEDYYKASVTRLP--IKWMSPESINFRRF 191
Query: 1035 -SKSDAWTAGTVAYEI--FGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVA 1086
+ SD W +EI FG PF+ N D + + LP+ + P V+ L+
Sbjct: 192 TTASDVWMFAVCMWEILSFGK-QPFFW-LENKDVIGVLEKGDRLPKPDL-CPPVLYTLMT 248
Query: 1087 KLLENDPSDRPS-AELAATVCQLY 1109
+ + DPSDRP EL ++ +Y
Sbjct: 249 RCWDYDPSDRPRFTELVCSLSDVY 272
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 191
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 191
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMAGFVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 129 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 183
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 184 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 231
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 232 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 269
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 129 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 183
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 184 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 231
Query: 1567 AYEIF 1571
E+
Sbjct: 232 LAELL 236
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 43/178 (24%)
Query: 911 RNM-SLFILMKKYNTDLRNYLRERCAQLSMHERI-LLFTQLLEGVTHLNMHRTAHRDLKS 968
RN +++M TDL+ + + ++ E+I L Q+L+G+ +++ HRDLK
Sbjct: 99 RNFYDFYLVMPFMQTDLQKIMGLKFSE----EKIQYLVYQMLKGLKYIHSAGVVHRDLKP 154
Query: 969 DNILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVAL 1023
N+ + DC +L I DFG + AD E+ G V APEV L
Sbjct: 155 GNLAVNEDC-------ELKILDFGLA-----------RHADAEMTGYVVTRWYRAPEVIL 196
Query: 1024 ATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL--NTNVP 1078
S+++Y+++ D W+ G + E+ F + DY ++ L Q+ T VP
Sbjct: 197 ------SWMHYNQTVDIWSVGCIMAEMLTGKTLF----KGKDY-LDQLTQILKVTGVP 243
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 36/148 (24%)
Query: 1432 RNM-SLFILMKKYNTDLRNYLRERCAQLSMHERI-LLFTQLLEGVTHLNMHRTAHRDLKS 1489
RN +++M TDL+ + + ++ E+I L Q+L+G+ +++ HRDLK
Sbjct: 99 RNFYDFYLVMPFMQTDLQKIMGLKFSE----EKIQYLVYQMLKGLKYIHSAGVVHRDLKP 154
Query: 1490 DNILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVAL 1544
N+ + DC +L I DFG + AD E+ G V APEV L
Sbjct: 155 GNLAVNEDC-------ELKILDFGLA-----------RHADAEMTGYVVTRWYRAPEVIL 196
Query: 1545 ATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
S+++Y+++ D W+ G + E+
Sbjct: 197 ------SWMHYNQTVDIWSVGCIMAEML 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 118 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 172
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 173 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 220
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 221 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 258
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 118 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 172
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 173 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 220
Query: 1567 AYEIF 1571
E+
Sbjct: 221 LAELL 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 123 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 177
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 178 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 225
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 226 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 263
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 123 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 177
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 178 CDFGSAKQLVRG------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 225
Query: 1567 AYEIF 1571
E+
Sbjct: 226 LAELL 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 995
+L+ + + + Q+ G+ +L HRDL + N L+ +N + I DFG S
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVK--IGDFGMSRD- 177
Query: 996 KSGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG 1051
YS+ +GG+ L M PE + F+ ++SD W+ G V +EIF
Sbjct: 178 ------VYSTDYYRVGGHTMLPIRWMPPESIMYRK--FT----TESDVWSLGVVLWEIFT 225
Query: 1052 H-DNPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 1107
+ P+YQ + N E + Q P+ + L+ + +P R + + T+ Q
Sbjct: 226 YGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 1516
+L+ + + + Q+ G+ +L HRDL + N L+ +N + I DFG S
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVK--IGDFGMSRD- 177
Query: 1517 KSGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG 1572
YS+ +GG+ L M PE + F+ ++SD W+ G V +EIF
Sbjct: 178 ------VYSTDYYRVGGHTMLPIRWMPPESIMYRK--FT----TESDVWSLGVVLWEIFT 225
Query: 1573 H-DNPFYQSARN 1583
+ P+YQ + N
Sbjct: 226 YGKQPWYQLSNN 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1000
Q+ EG+ ++ HRDL++ N+L+ SE C I DFG + YT + G
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLV--SESLMCK---IADFGLARVIEDNEYTAREGAK 171
Query: 1001 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
+ APE G F+ KS+ W+ G + YEI + Y
Sbjct: 172 FP-----------IKWTAPEA--INFGCFTI----KSNVWSFGILLYEIVTYGKIPYPGR 214
Query: 1061 RNTDYEVNALPQ-----LNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
N D ++AL Q N P+ + ++ + +RP+ + +V
Sbjct: 215 TNADV-MSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSV 263
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLS 1521
Q+ EG+ ++ HRDL++ N+L+ SE C I DFG + YT + G
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLV--SESLMCK---IADFGLARVIEDNEYTAREGAK 171
Query: 1522 MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
+ APE G F+ KS+ W+ G + YEI + Y
Sbjct: 172 FP-----------IKWTAPEA--INFGCFTI----KSNVWSFGILLYEIVTYGKIPYPGR 214
Query: 1582 RNTD 1585
N D
Sbjct: 215 TNAD 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 39/167 (23%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ EG+ + HRDL++ NIL+ S C I DFG +
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSAS--LVCK---IADFGLA--------------- 325
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIF--------GHDNPFYQ 1058
V P + P +F +++ KSD W+ G + EI G NP
Sbjct: 326 -----RVGAKFP-IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
Query: 1059 SARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 1105
A Y +P+ N PE + ++ + +N P +RP+ E +V
Sbjct: 380 RALERGYR---MPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSV 422
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 59/240 (24%)
Query: 871 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL 930
HPN+V+ A T P L+ Y SL+ L+ K
Sbjct: 93 HPNIVLFMGAVTQ----------------PPNLSIVTEYLSRGSLYRLLHKSGA------ 130
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCPQLVITD 988
RE QL R+ + + +G+ +L+ HR+LKS N+L+D + + D
Sbjct: 131 RE---QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-----TVKVCD 182
Query: 989 FGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
FG S S S+A G MAPEV P + KSD ++ G + +E
Sbjct: 183 FGLSRLKASTFLSSKSAA-----GTPEWMAPEVLRDEP------SNEKSDVYSFGVILWE 231
Query: 1049 I------FGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLE----NDPSDRPS 1098
+ +G+ NP Q ++ L +P + VA ++E N+P RPS
Sbjct: 232 LATLQQPWGNLNP-AQVVAAVGFKCKRL-----EIPRNLNPQVAAIIEGCWTNEPWKRPS 285
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 64/262 (24%)
Query: 1319 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYS-AASNSHAILKAMSXXXXXXXXXXXX 1377
+ I + I G+ V+ A + G + A+K++ A + L+ ++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA------------ 86
Query: 1378 XXDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLF 1437
+M + HPN+V+ A T P L+ Y SL+
Sbjct: 87 ----IMKRLR----HPNIVLFMGAVTQ----------------PPNLSIVTEYLSRGSLY 122
Query: 1438 ILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHR--TAHRDLKSDNILLD 1495
L+ K RE QL R+ + + +G+ +L+ HR+LKS N+L+D
Sbjct: 123 RLLHKSGA------RE---QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD 173
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 1555
+ + DFG S S S+A G MAPEV P +
Sbjct: 174 KKY-----TVKVCDFGLSRLKASTFLSSKSAA-----GTPEWMAPEVLRDEP------SN 217
Query: 1556 SKSDAWTAGTVAYEIFGHDNPF 1577
KSD ++ G + +E+ P+
Sbjct: 218 EKSDVYSFGVILWELATLQQPW 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-----NKSGLSMQ 1002
Q+L G+ +++ HRDLK N+LL NT L I DFG + + +G +
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1050
Y + APE+ L + G Y+KS D W+ G + E+
Sbjct: 207 YVATR-------WYRAPEIMLNSKG------YTKSIDIWSVGCILAEML 242
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-----NKSGLSMQ 1523
Q+L G+ +++ HRDLK N+LL NT L I DFG + + +G +
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLL-----NTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
Y + APE+ L + G Y+KS D W+ G + E+
Sbjct: 207 YVATR-------WYRAPEIMLNSKG------YTKSIDIWSVGCILAEML 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ EG+ +L R HRDL + N+L+ T +
Sbjct: 100 LLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 154
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 155 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 205
Query: 1046 AYEIF 1050
+E+
Sbjct: 206 VWELM 210
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ EG+ +L R HRDL + N+L+ T +
Sbjct: 100 LLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 154
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 155 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 205
Query: 1567 AYEIF 1571
+E+
Sbjct: 206 VWELM 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 40/173 (23%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
+++M TDL+ + + S + L Q+L+G+ +++ HRDLK N+ +
Sbjct: 121 DFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + AD E+ G V APEV L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHADAEMTGYVVTRWYRAPEVIL----- 214
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL--NTNVP 1078
S+++Y+++ D W+ G + E+ F + DY ++ L Q+ T VP
Sbjct: 215 -SWMHYNQTVDIWSVGCIMAEMLTGKTLF----KGKDY-LDQLTQILKVTGVP 261
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
+++M TDL+ + + S + L Q+L+G+ +++ HRDLK N+ +
Sbjct: 121 DFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + AD E+ G V APEV L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHADAEMTGYVVTRWYRAPEVIL----- 214
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
S+++Y+++ D W+ G + E+
Sbjct: 215 -SWMHYNQTVDIWSVGCIMAEML 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 995
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 996 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTN 1516
L++ I Q+ +G+ L + HRDL + NILL SE N + I DFG +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL--SEKNV---VKICDFGLARDIX 199
Query: 1517 KSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
K ++ A + L MAPE +F V +SD W+ G + +EIF
Sbjct: 200 KDPDXVRKGDARLPL----KWMAPET------IFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 189 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 243
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 244 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 291
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 292 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 329
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 189 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 243
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 244 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 291
Query: 1567 AYEIF 1571
E+
Sbjct: 292 LAELL 296
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 176
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 177 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 224
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 225 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 262
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 176
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 177 CDFGSAKQLVRG------------EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 224
Query: 1567 AYEIF 1571
E+
Sbjct: 225 LAELL 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN-----IKIADFG-------------FS 161
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ +G + A P LF Y + D W+ G + Y + PF
Sbjct: 162 NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN-----IKIADFG-------------FS 161
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ +G + A P LF Y + D W+ G + Y + PF
Sbjct: 162 NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG + +
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 155
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
A + APE AL G F+ KSD W+ G + E+
Sbjct: 156 DNEXTARQGAKF----PIKWTAPEAALY--GRFTI----KSDVWSFGILLTELTTKGRVP 205
Query: 1057 YQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 206 YPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 253
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG + +
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 155
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
A + APE AL G F+ KSD W+ G + E+
Sbjct: 156 DNEXTARQGAKF----PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 198
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 115 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 169
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 170 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 217
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 218 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 255
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 115 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 169
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 170 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 217
Query: 1567 AYEIF 1571
E+
Sbjct: 218 LAELL 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 146 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 200
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 201 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 248
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 249 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 286
Score = 37.0 bits (84), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 146 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 200
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 201 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 248
Query: 1567 AYEIF 1571
E+
Sbjct: 249 LAELL 253
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEKKA 183
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
G V MAPEV + +D W+ G + +E+ PF ++ +
Sbjct: 184 YSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETM 235
Query: 1068 NALPQLNTNVPEVM----RRLVAKLLENDPSDRPSA 1099
+ + +P+ + + L+ L + +P++R A
Sbjct: 236 TMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGA 271
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+L + HL+ +RDLK +NILLD + +TDFG S S+ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKE-----SIDHEKKA 183
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
G V MAPEV + +D W+ G + +E+ PF R
Sbjct: 184 YSFCGTVEYMAPEVVNRRG------HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 120 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 214
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 215 -NWMHYNQTVDIWSVGCIMAELL 236
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 120 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 214
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 215 -NWMHYNQTVDIWSVGCIMAELL 236
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 98 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 156 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 192
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 193 -NWMHYNQTVDIWSVGCIMAELL 214
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 98 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 156 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 192
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 193 -NWMHYNQTVDIWSVGCIMAELL 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 946 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1005
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1006 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1056
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 1467 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 1526
F Q++ V + + HRDLK++N+LLD + + I DFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-----IKIADFG-------------FS 160
Query: 1527 ADIELGGNVALMAPEVALATPGLFSFVNYS--KSDAWTAGTVAYEIFGHDNPF 1577
+ G + A P LF Y + D W+ G + Y + PF
Sbjct: 161 NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 993
L+M + I Q+ +G+ +L HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 994 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF--- 1050
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--XVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 1051 GHDNPFYQSARNTD-YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G+ P R + + + N E M RL+ + + +P RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS---Y 1514
L+M + I Q+ +G+ +L HRDL + NIL+ ++ I+DFG S Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGR-----KMKISDFGLSRDVY 201
Query: 1515 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
S ++ S I P +A LF + ++SD W+ G + +EI
Sbjct: 202 EEDS--XVKRSQGRI----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 111 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 168
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 169 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 205
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 206 -NWMHYNQTVDIWSVGCIMAELL 227
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 111 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 168
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 169 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 205
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 206 -NWMHYNQTVDIWSVGCIMAELL 227
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTXTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 1098 S 1098
S
Sbjct: 263 S 263
Score = 33.9 bits (76), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTXTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 203 FGVLLWEI 210
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 215
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 215
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 36/193 (18%)
Query: 1477 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI---EL-- 1531
L+ AHRDLK +NIL + E + ++ D G SG+ + S I EL
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLG------SGMKLNNSCTPITTPELTT 180
Query: 1532 -GGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRK 1590
G+ MAPEV +F + + D W+ G V Y + PF W R
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYD-KRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 1591 WLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLN-TNVPEVMRRLVA 1649
+ + N ++S + YE P + ++ + L++
Sbjct: 240 EVCRVC-------------------QNKLFESIQEGKYE---FPDKDWAHISSEAKDLIS 277
Query: 1650 KLLENDPSDRPSA 1662
KLL D R SA
Sbjct: 278 KLLVRDAKQRLSA 290
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 40/174 (22%)
Query: 956 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI---EL-- 1010
L+ AHRDLK +NIL + E + ++ D G SG+ + S I EL
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLG------SGMKLNNSCTPITTPELTT 180
Query: 1011 -GGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF-------GH---------- 1052
G+ MAPEV +F + + D W+ G V Y + GH
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYD-KRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 1053 ------DNPFYQSARNTDYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSA 1099
N ++S + YE P + ++ + L++KLL D R SA
Sbjct: 240 EVCRVCQNKLFESIQEGKYE---FPDKDWAHISSEAKDLISKLLVRDAKQRLSA 290
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 158
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
+ED+ +L I DFG + D E+ G VA APE+ L +
Sbjct: 159 AVNEDS---ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 198
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELL 219
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 158
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
+ED+ +L I DFG + D E+ G VA APE+ L +
Sbjct: 159 AVNEDS---ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 198
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELL 219
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 414
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 415 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 457
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 458 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 512
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 414
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ YT + G + APE AL G F+ KSD W+ G + E+
Sbjct: 415 DNEYTARQGAKFP-----------IKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 457
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 97 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 155 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 191
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 192 -NWMHYNQTVDIWSVGCIMAELL 213
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 215
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 121 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 179 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 215
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 216 -NWMHYNQTVDIWSVGCIMAELL 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 148 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 202
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 203 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 250
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 251 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 288
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 148 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 202
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 203 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 250
Query: 1567 AYEIF 1571
E+
Sbjct: 251 LAELL 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 926 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 329
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 330 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 374
Query: 1045 VAYEIF 1050
+ +EI+
Sbjct: 375 LLWEIY 380
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 1447 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 329
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 330 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 374
Query: 1566 VAYEIF 1571
+ +EI+
Sbjct: 375 LLWEIY 380
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 198
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 199 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 247 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 198
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 199 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 1567 AYEIF 1571
E+
Sbjct: 247 LAELL 251
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 124 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 182 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 218
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 219 -NWMHYNQTVDIWSVGCIMAELL 240
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 124 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 182 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 218
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 219 -NWMHYNQTVDIWSVGCIMAELL 240
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 99 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 157 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 193
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 194 -NWMHYNQTVDIWSVGCIMAELL 215
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 99 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 157 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 193
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 194 -NWMHYNQTVDIWSVGCIMAELL 215
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 162
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
+ED+ +L I DFG + D E+ G VA APE+ L +
Sbjct: 163 AVNEDS---ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 202
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 162
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
+ED+ +L I DFG + D E+ G VA APE+ L +
Sbjct: 163 AVNEDS---ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 202
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 972
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 973 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
++ + D L + DFG S+ N Q S +E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMVEFVATRWYRAPEVMLTS 197
Query: 1026 PGLFSFVNYSKS-DAWTAGTVAYEIF 1050
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 1493
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 1494 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
++ + D L + DFG S+ N Q S +E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMVEFVATRWYRAPEVMLTS 197
Query: 1547 PGLFSFVNYSKS-DAWTAGTVAYEIF 1571
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRXIQRRD 193
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1058
G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 X-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
++ Q L+ + +L+ ++ HRDLK+ NIL D + + DFG S N + +
Sbjct: 139 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD-----IKLADFGVSAKNTRXIQRRD 193
Query: 1525 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
G MAPEV + +Y K+D W+ G E+ + P ++
Sbjct: 194 X-----FIGTPYWMAPEVVMCETSKDRPYDY-KADVWSLGITLIEMAEIEPPHHE 242
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1007 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 1065 YEVNALP-----QLNTNVPEVMRRLVAKLLENDPSDR 1096
+E++ + +L + +R L+ LL+ D + R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
Score = 33.5 bits (75), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 21/114 (18%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1528 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQ 1579
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1007 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 1065 YEVNALP-----QLNTNVPEVMRRLVAKLLENDPSDR 1096
+E++ + +L + +R L+ LL+ D + R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
Score = 33.5 bits (75), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 21/114 (18%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1528 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQ 1579
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 164 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 200
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 201 -NWMHYNQTVDIWSVGCIMAELL 222
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 164 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 200
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 201 -NWMHYNQTVDIWSVGCIMAELL 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 138 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 192
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 193 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 240
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 241 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 278
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 138 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 192
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 193 CDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 240
Query: 1567 AYEIF 1571
E+
Sbjct: 241 LAELL 245
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 986
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 198
Query: 987 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1045
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 199 CDFGSAKQLVRGEP------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 1046 AYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1084
E+ P + D V + L T E +R +
Sbjct: 247 LAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVI 1507
R+Y R + ++ ++ ++ QL + +++ HRD+K N+LLD D L +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAV--LKL 198
Query: 1508 TDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTV 1566
DFGS+ G NV+ + A +F +Y+ S D W+AG V
Sbjct: 199 CDFGSAKQLVRGEP------------NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 1567 AYEIF 1571
E+
Sbjct: 247 LAELL 251
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 100 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 157
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 158 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 194
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 195 -NWMHYNQTVDIWSVGCIMAELL 216
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 100 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 157
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 158 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 194
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 195 -NWMHYNQTVDIWSVGCIMAELL 216
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 96 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 150
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 151 -VKVADFGLSRLMTGDTXTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 198
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 199 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 258
Query: 1098 S 1098
S
Sbjct: 259 S 259
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 96 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 150
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 151 -VKVADFGLSRLMTGDTXTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 198
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 199 FGVLLWEI 206
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 120 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 214
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 215 -NWMHYNQTVDIWSVGCIMAELL 236
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 120 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 178 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 214
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 215 -NWMHYNQTVDIWSVGCIMAELL 236
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 113 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 171 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 207
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 208 -NWMHYNQTVDIWSVGCIMAELL 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 98 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 156 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 192
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 193 -NWMHYNQTVDIWSVGCIMAELL 214
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 98 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 156 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 192
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 193 -NWMHYNQTVDIWSVGCIMAELL 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 103 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 161 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 197
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 198 -NWMHYNQTVDIWSVGCIMAELL 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 164 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 200
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 201 -NWMHYNQTVDIWSVGCIMAELL 222
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 164 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 200
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 201 -NWMHYNQTVDIWSVGCIMAELL 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 112 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 170 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 206
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 207 -NWMHYNQTVDIWSVGCIMAELL 228
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 112 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 170 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 206
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 207 -NWMHYNQTVDIWSVGCIMAELL 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 124 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 182 NEDC-------ELKILDFGLA-----------RHTDDEMXGYVATRWYRAPEIML----- 218
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 219 -NWMHYNQTVDIWSVGCIMAELL 240
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 124 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 182 NEDC-------ELKILDFGLA-----------RHTDDEMXGYVATRWYRAPEIML----- 218
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 219 -NWMHYNQTVDIWSVGCIMAELL 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 107 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 165 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 201
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 202 -NWMHYNQTVDIWSVGCIMAELL 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 164 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 201
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELL 222
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 164 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 201
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELL 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 20/126 (15%)
Query: 926 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 93 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 148
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
++DFG L+ + SS V APE L +KSD W+ G
Sbjct: 149 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEA------LREAAFSTKSDVWSFGI 193
Query: 1045 VAYEIF 1050
+ +EI+
Sbjct: 194 LLWEIY 199
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 20/126 (15%)
Query: 1447 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 93 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 148
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
++DFG L+ + SS V APE L +KSD W+ G
Sbjct: 149 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEA------LREAAFSTKSDVWSFGI 193
Query: 1566 VAYEIF 1571
+ +EI+
Sbjct: 194 LLWEIY 199
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 112 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 170 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 207
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELL 228
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 112 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 170 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 207
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELL 228
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 164 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 201
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELL 222
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 106 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 164 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 201
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELL 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 926 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 87 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 142
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 143 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 187
Query: 1045 VAYEIF 1050
+ +EI+
Sbjct: 188 LLWEIY 193
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 1447 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 87 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 142
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 143 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 187
Query: 1566 VAYEIF 1571
+ +EI+
Sbjct: 188 LLWEIY 193
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 926 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 102 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 157
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 158 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 202
Query: 1045 VAYEIF 1050
+ +EI+
Sbjct: 203 LLWEIY 208
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 1447 LRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
L +YLR R + + +L F+ + E + +L + HRDL + N+L+ SEDN
Sbjct: 102 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAK-- 157
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
++DFG L+ + SS V APE FS +KSD W+ G
Sbjct: 158 -VSDFG--------LTKEASSTQDTGKLPVKWTAPEALREKK--FS----TKSDVWSFGI 202
Query: 1566 VAYEIF 1571
+ +EI+
Sbjct: 203 LLWEIY 208
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1007 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 1065 YEVNALP-----QLNTNVPEVMRRLVAKLLENDPSDR 1096
+E++ + +L + +R L+ LL+ D + R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 21/114 (18%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 345
Query: 1528 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQ 1579
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 346 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 1098 S 1098
S
Sbjct: 258 S 258
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 198 FGVLLWEI 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 990
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 162
Query: 991 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
+ +T + G + APE AL G F+ KSD W+ G + E+
Sbjct: 163 DNEWTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 205
Query: 1050 FGHDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
Y N + Y + P+ PE + L+ + +P +RP+ E
Sbjct: 206 TTKGRVPYPGMVNREVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFE 260
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG------ 1511
L + + + + Q+ G+ ++ HRDL++ NIL+ E+ C + DFG
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GENLVCK---VADFGLARLIE 162
Query: 1512 -SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ +T + G + APE AL G F+ KSD W+ G + E+
Sbjct: 163 DNEWTARQGAKF-----------PIKWTAPEAALY--GRFTI----KSDVWSFGILLTEL 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L +++L+ HRD+KSD+ILL + ++ ++DFG + +
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILL-----TSDGRIKLSDFGFCAQVSKEVPKRKX---- 200
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-----QSARNT 1063
L G MAPEV P ++ D W+ G + E+ + P++ Q+ R
Sbjct: 201 -LVGTPYWMAPEVISRLP------YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
Query: 1064 DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 1100
+ + V V+R + +L +PS R +A+
Sbjct: 254 RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQ 290
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 1470 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1529
+L +++L+ HRD+KSD+ILL + ++ ++DFG + +
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILL-----TSDGRIKLSDFGFCAQVSKEVPKRKX---- 200
Query: 1530 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY 1578
L G MAPEV P ++ D W+ G + E+ + P++
Sbjct: 201 -LVGTPYWMAPEVISRLP------YGTEVDIWSLGIMVIEMIDGEPPYF 242
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 23/158 (14%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
L QLL + +++ HRD+K N+LLD L + DFG
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG----VLKLIDFG------------- 187
Query: 1004 SSADIELGG--NVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA 1060
SA I + G NV+ + A +F NY+ + D W+ G V E+ P +
Sbjct: 188 -SAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGE 245
Query: 1061 RNTDYEVNALPQLNTNVPEVMRRLVAKLLEND-PSDRP 1097
D V + L T E ++ + +E+ P RP
Sbjct: 246 SGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRP 283
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 22/124 (17%)
Query: 1465 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1524
L QLL + +++ HRD+K N+LLD L + DFG
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG----VLKLIDFG------------- 187
Query: 1525 SSADIELGG--NVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA 1581
SA I + G NV+ + A +F NY+ + D W+ G V E+ P +
Sbjct: 188 -SAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGE 245
Query: 1582 RNTD 1585
D
Sbjct: 246 SGID 249
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 1098 S 1098
S
Sbjct: 258 S 258
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 198 FGVLLWEI 205
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 107 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 161
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 162 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 212
Query: 1046 AYEIF 1050
+E+
Sbjct: 213 VWELM 217
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 107 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 161
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 162 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 212
Query: 1567 AYEIF 1571
+E+
Sbjct: 213 VWELM 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 344
Query: 1007 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQSARNTD 1064
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 345 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
Query: 1065 YEVNALP-----QLNTNVPEVMRRLVAKLLENDPSDR 1096
+E++ + +L + +R L+ LL+ D + R
Sbjct: 399 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 435
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 21/114 (18%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
+++ G+ H++ +RDLK NILLD + G + GL+ +S
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILLD-------------EHGHVRISDLGLACDFSKK 344
Query: 1528 DIELG-GNVALMAPEVALATPGLFSFVNYSKSDAW-TAGTVAYEIFGHDNPFYQ 1579
G MAPEV L V Y S W + G + +++ +PF Q
Sbjct: 345 KPHASVGTHGYMAPEV------LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 157 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 157 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 99 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 153
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 154 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 201
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 202 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
Query: 1098 S 1098
S
Sbjct: 262 S 262
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 99 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 153
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 154 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 201
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 202 FGVLLWEI 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1045 VAYEIF 1050
+E+
Sbjct: 210 TVWELM 215
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1566 VAYEIF 1571
+E+
Sbjct: 210 TVWELM 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
++++G+ +L+ H+DLKS N+ D ++VITDFG + SG+ +Q +
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFYDNG------KVVITDFG--LFSISGV-LQAGRRE 188
Query: 1529 IEL---GGNVALMAPEV--ALATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPFYQSAR 1582
+L G + +APE+ L+ + +SK SD + GT+ YE+ + PF
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248
Query: 1583 NTDYWH 1588
W
Sbjct: 249 EAIIWQ 254
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
++++G+ +L+ H+DLKS N+ D ++VITDFG + SG+ +Q +
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFYDNG------KVVITDFG--LFSISGV-LQAGRRE 188
Query: 1008 IEL---GGNVALMAPEV--ALATPGLFSFVNYSK-SDAWTAGTVAYEIFGHDNPF 1056
+L G + +APE+ L+ + +SK SD + GT+ YE+ + PF
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1045 VAYEIF 1050
+E+
Sbjct: 210 TVWELM 215
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1566 VAYEIF 1571
+E+
Sbjct: 210 TVWELM 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 1098 S 1098
S
Sbjct: 263 S 263
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 203 FGVLLWEI 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 164
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 165 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 215
Query: 1046 AYEIF 1050
+E+
Sbjct: 216 VWELM 220
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 164
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 165 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 215
Query: 1567 AYEIF 1571
+E+
Sbjct: 216 VWELM 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 159
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 160 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 210
Query: 1046 AYEIF 1050
+E+
Sbjct: 211 VWELM 215
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 159
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 160 ITDFGRAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 210
Query: 1567 AYEIF 1571
+E+
Sbjct: 211 VWELM 215
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 38/149 (25%)
Query: 925 DLRNYLRERCAQLSMHE---------------RILLFTQLL-------EGVTHLNMHRTA 962
DL NYLR + + S E +L F LL +G+ L
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 963 HRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRDL + N+L+ T ++V I DFG + S ++ + GN L P
Sbjct: 195 HRDLAARNVLV------THGKVVKICDFGLARD-------IMSDSNYVVRGNARL--PVK 239
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+A LF + KSD W+ G + +EIF
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 38/149 (25%)
Query: 1446 DLRNYLRERCAQLSMHE---------------RILLFTQLL-------EGVTHLNMHRTA 1483
DL NYLR + + S E +L F LL +G+ L
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 1484 HRDLKSDNILLDCSEDNTCPQLV-ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1542
HRDL + N+L+ T ++V I DFG + S ++ + GN L P
Sbjct: 195 HRDLAARNVLV------THGKVVKICDFGLARD-------IMSDSNYVVRGNARL--PVK 239
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+A LF + KSD W+ G + +EIF
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 1098 S 1098
S
Sbjct: 263 S 263
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 203 FGVLLWEI 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 108 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + +AD E+ G VA APE+ L
Sbjct: 166 NEDC-------ELKILDFG----------LARHTAD-EMTGYVATRWYRAPEIML----- 202
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 203 -NWMHYNQTVDIWSVGCIMAELL 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 923 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 157
Query: 983 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1040
+ ++DFG S Y D E +V P V + P + + + SKSD W
Sbjct: 158 VVKVSDFGLSRYV-----------LDDEETSSVGSKFP-VRWSPPEVLMYSKFSSKSDIW 205
Query: 1041 TAGTVAYEIFGHDNPFYQSARNTD 1064
G + +EI+ Y+ N++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 1444 NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
N L NYLRE + + + + + E + +L + HRDL + N L+ N
Sbjct: 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV-----NDQG 157
Query: 1504 QLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAW 1561
+ ++DFG S Y D E +V P V + P + + + SKSD W
Sbjct: 158 VVKVSDFGLSRYV-----------LDDEETSSVGSKFP-VRWSPPEVLMYSKFSSKSDIW 205
Query: 1562 TAGTVAYEIFGHDNPFYQSARNTD 1585
G + +EI+ Y+ N++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 93 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 147
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 148 -VKVADFGLSRLMTGDTXTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 195
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 196 FGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 1098 S 1098
S
Sbjct: 256 S 256
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 93 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 147
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 148 -VKVADFGLSRLMTGDTXTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 195
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 196 FGVLLWEI 203
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.9 bits (89), Expect = 0.024, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 83 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 140
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 141 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 192
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 193 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 251
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 252 VLKCCLKRDPKQRIS 266
Score = 37.7 bits (86), Expect = 0.057, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 83 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 140
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 141 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 192
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 193 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 174
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-QSARNTDYE 1066
E+ G MAPEV T + K D W+ G +A E+ + P+ ++ Y
Sbjct: 175 -EMVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 1067 V--NALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAE 1100
+ N P+L + + R + + L+ D R SA+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK 265
Score = 37.7 bits (86), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 174
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
E+ G MAPEV T + K D W+ G +A E+ + P+
Sbjct: 175 -EMVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.9 bits (89), Expect = 0.025, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 84 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 142 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 193
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 252
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 253 VLKCCLKRDPKQRIS 267
Score = 37.7 bits (86), Expect = 0.058, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 84 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 142 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 193
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 1098 S 1098
S
Sbjct: 263 S 263
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 100 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 154
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 155 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 202
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 203 FGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 108 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 162
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 163 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 210
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 211 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 270
Query: 1098 S 1098
S
Sbjct: 271 S 271
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 108 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 162
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 163 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 210
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 211 FGVLLWEI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 152 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 199
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 200 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 1098 S 1098
S
Sbjct: 260 S 260
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 152 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 199
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 200 FGVLLWEI 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 82 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 141 LV--GENHL---VKVADFGLSRLMTGDTXTAHAGAKF----PIKWTAPES-------LAY 184
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMR 244
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 245 ACWQWNPSDRPS 256
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 82 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 141 LV--GENHL---VKVADFGLSRLMTGDTXTAHAGAKF----PIKWTAPES-------LAY 184
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL G+ + + R HRDLK N+L+ N +L I DFG + G+ ++ + +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLA--RAFGIPVRKYTHE 160
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
I + AP+V + + YS + D W+ G + E+ + P + D
Sbjct: 161 IV---TLWYRAPDVLMGSK------KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQL 210
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L +S P+ E+ +D F T YE + E L
Sbjct: 211 MR--IFRILGTPNSKNWPNVT--ELPKYDPNF------TVYEPLPWESFLKGLDESGIDL 260
Query: 1648 VAKLLENDPSDRPSAELA 1665
++K+L+ DP+ R +A+ A
Sbjct: 261 LSKMLKLDPNQRITAKQA 278
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL G+ + + R HRDLK N+L+ N +L I DFG + G+ ++ + +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLA--RAFGIPVRKYTHE 160
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTD 1064
I + AP+V + + YS + D W+ G + E+ + P + D
Sbjct: 161 IV---TLWYRAPDVLMGSK------KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEAD 208
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.9 bits (89), Expect = 0.028, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 87 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 145 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 196
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 197 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 255
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 256 VLKCCLKRDPKQRIS 270
Score = 37.7 bits (86), Expect = 0.064, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 87 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 145 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 196
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 197 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 184
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 185 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 231
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 232 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 152 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 199
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 200 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 1098 S 1098
S
Sbjct: 260 S 260
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 152 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 199
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 200 FGVLLWEI 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 43/206 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 96 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 155
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
+L + N ++ + D T + I DFG + Y K G + V M
Sbjct: 156 NLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQ 1072
APE G+F+ + SD W+ G V +EI YQ N + L Q
Sbjct: 201 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 254
Query: 1073 LNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ N PE + L+ + +P+ RP+
Sbjct: 255 PD-NCPERVTDLMRMCWQFNPNMRPT 279
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 96 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 155
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
+L + N ++ + D T + I DFG + Y K G + V M
Sbjct: 156 NLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 200
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
APE G+F+ + SD W+ G V +EI YQ N
Sbjct: 201 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSN 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 157
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 158 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 208
Query: 1045 VAYEIF 1050
+E+
Sbjct: 209 TVWELM 214
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 157
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 158 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 208
Query: 1566 VAYEIF 1571
+E+
Sbjct: 209 TVWELM 214
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 44/149 (29%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERI------LLFTQLLEGVTHLNMHRTAHRDLK 967
+++M TDL +L HE++ L Q+L+G+ +++ HRDLK
Sbjct: 104 DFYLVMPFMGTDL--------GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK 155
Query: 968 SDNILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVA 1022
N+ + DC +L I DF GL+ Q AD E+ G V APEV
Sbjct: 156 PGNLAVNEDC-------ELKILDF--------GLARQ---ADSEMXGXVVTRWYRAPEVI 197
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIF 1050
L +++ Y+++ D W+ G + E+
Sbjct: 198 L------NWMRYTQTVDIWSVGCIMAEMI 220
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 44/149 (29%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERI------LLFTQLLEGVTHLNMHRTAHRDLK 1488
+++M TDL +L HE++ L Q+L+G+ +++ HRDLK
Sbjct: 104 DFYLVMPFMGTDL--------GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK 155
Query: 1489 SDNILL--DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVA 1543
N+ + DC +L I DF GL+ Q AD E+ G V APEV
Sbjct: 156 PGNLAVNEDC-------ELKILDF--------GLARQ---ADSEMXGXVVTRWYRAPEVI 197
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
L +++ Y+++ D W+ G + E+
Sbjct: 198 L------NWMRYTQTVDIWSVGCIMAEMI 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 113 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 167
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 168 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 218
Query: 1046 AYEIF 1050
+E+
Sbjct: 219 VWELM 223
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 113 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 167
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 168 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 218
Query: 1567 AYEIF 1571
+E+
Sbjct: 219 VWELM 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.030, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 161 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 212
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 272 VLKCCLKRDPKQRIS 286
Score = 37.4 bits (85), Expect = 0.068, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 161 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 212
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 240
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 300 VLKCCLKRDPKQRIS 314
Score = 37.7 bits (86), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 240
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 43/206 (20%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 964
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 965 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1017
+L + N ++ + D T + I DFG + Y K G + V M
Sbjct: 155 NLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 199
Query: 1018 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQ 1072
APE G+F+ + SD W+ G V +EI YQ N + L Q
Sbjct: 200 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 1073 LNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ N PE + L+ + +P+ RP+
Sbjct: 254 PD-NCPERVTDLMRMCWQFNPNMRPT 278
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQL---------SMHERILLFTQLLEGVTHLNMHRTAHR 1485
+L ++ + DL++YLR + ++ E I + ++ +G+ +LN + HR
Sbjct: 95 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 154
Query: 1486 DLKSDNILLDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALM 1538
+L + N ++ + D T + I DFG + Y K G + V M
Sbjct: 155 NLAARNCMV--AHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL----------PVRWM 199
Query: 1539 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN 1583
APE G+F+ + SD W+ G V +EI YQ N
Sbjct: 200 APES--LKDGVFT----TSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 175
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 176 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 222
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 223 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 84 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 143 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAY 186
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 247 ACWQWNPSDRPS 258
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 84 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 142
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 143 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAY 186
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 187 NKFSIKSDVWAFGVLLWEI 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 157
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 158 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 208
Query: 1045 VAYEIF 1050
+E+
Sbjct: 209 TVWELM 214
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 104 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 157
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 158 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 208
Query: 1566 VAYEIF 1571
+E+
Sbjct: 209 TVWELM 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 186
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 187 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 233
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 234 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 275
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 160
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 161 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 211
Query: 1046 AYEIF 1050
+E+
Sbjct: 212 VWELM 216
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 160
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 161 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 211
Query: 1567 AYEIF 1571
+E+
Sbjct: 212 VWELM 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1045 VAYEIF 1050
+E+
Sbjct: 211 TVWELM 216
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1566 VAYEIF 1571
+E+
Sbjct: 211 TVWELM 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 107 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 161
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 162 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 212
Query: 1046 AYEIF 1050
+E+
Sbjct: 213 VWELM 217
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 107 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 161
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 162 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 212
Query: 1567 AYEIF 1571
+E+
Sbjct: 213 VWELM 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1045 VAYEIF 1050
+E+
Sbjct: 211 TVWELM 216
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1566 VAYEIF 1571
+E+
Sbjct: 211 TVWELM 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 1098 S 1098
S
Sbjct: 258 S 258
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + P ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF-----------PIKWTAPESLAYNKFSIKSDVWA 197
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 198 FGVLLWEI 205
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1045 VAYEIF 1050
+E+
Sbjct: 211 TVWELM 216
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 106 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 159
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 160 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 210
Query: 1566 VAYEIF 1571
+E+
Sbjct: 211 TVWELM 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ E +APEV
Sbjct: 144 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSL------TEPCYTPYYVAPEV------- 188
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 246
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQR 267
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ E +APEV
Sbjct: 144 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSL------TEPCYTPYYVAPEV------- 188
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 159
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 160 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 210
Query: 1046 AYEIF 1050
+E+
Sbjct: 211 VWELM 215
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 159
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 160 ITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 210
Query: 1567 AYEIF 1571
+E+
Sbjct: 211 VWELM 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1045 VAYEIF 1050
+E+
Sbjct: 208 TVWELM 213
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 103 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 156
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 157 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 207
Query: 1566 VAYEIF 1571
+E+
Sbjct: 208 TVWELM 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 197
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 1098 S 1098
S
Sbjct: 258 S 258
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 197
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 198 FGVLLWEI 205
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1045 VAYEIF 1050
+E+
Sbjct: 210 TVWELM 215
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 105 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 158
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 159 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 209
Query: 1566 VAYEIF 1571
+E+
Sbjct: 210 TVWELM 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 164
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 165 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 215
Query: 1046 AYEIF 1050
+E+
Sbjct: 216 VWELM 220
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 164
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 165 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 215
Query: 1567 AYEIF 1571
+E+
Sbjct: 216 VWELM 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 128 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 181
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 182 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 232
Query: 1045 VAYEIF 1050
+E+
Sbjct: 233 TVWELM 238
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 128 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 181
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 182 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 232
Query: 1566 VAYEIF 1571
+E+
Sbjct: 233 TVWELM 238
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 229
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 230 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 276
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 277 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 318
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 97 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 151
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 152 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 202
Query: 1046 AYEIF 1050
+E+
Sbjct: 203 VWELM 207
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 97 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 151
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 152 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 202
Query: 1567 AYEIF 1571
+E+
Sbjct: 203 VWELM 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 163
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 164 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 214
Query: 1045 VAYEIF 1050
+E+
Sbjct: 215 TVWELM 220
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 163
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 164 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 214
Query: 1566 VAYEIF 1571
+E+
Sbjct: 215 TVWELM 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 163
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 164 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 214
Query: 1045 VAYEIF 1050
+E+
Sbjct: 215 TVWELM 220
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 110 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 163
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG + L + E GG V P +A + + +SD W+ G
Sbjct: 164 KITDFGLAKL----LGAEEKEYHAE-GGKV----PIKWMALESILHRIYTHQSDVWSYGV 214
Query: 1566 VAYEIF 1571
+E+
Sbjct: 215 TVWELM 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1041
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 197
Query: 1042 AGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRP 1097
G + +EI + +P+ + YE+ + + PE + L+ + +PSDRP
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 1098 S 1098
S
Sbjct: 258 S 258
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 95 NLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 149
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS-KSDAWT 1562
+ + DFG S ++ A + APE ++ +S KSD W
Sbjct: 150 -VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAYNKFSIKSDVWA 197
Query: 1563 AGTVAYEI 1570
G + +EI
Sbjct: 198 FGVLLWEI 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I D+G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDYGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I D+G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDYGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 89 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 148 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAY 191
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 252 ACWQWNPSDRPS 263
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 89 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 147
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 148 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKF----PIKWTAPES-------LAY 191
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 192 NKFSIKSDVWAFGVLLWEI 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 179
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 180 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 226
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 227 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 268
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 137 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 190
Query: 986 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1044
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 191 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 241
Query: 1045 VAYEIF 1050
+E+
Sbjct: 242 TVWELM 247
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ PQ V
Sbjct: 137 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV------KTPQHV 190
Query: 1507 -ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 1565
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 191 KITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGV 241
Query: 1566 VAYEIF 1571
+E+
Sbjct: 242 TVWELM 247
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
+ ++Y+++ D W+ G + E+
Sbjct: 196 -NAMHYNQTVDIWSVGCIMAELL 217
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
+ ++Y+++ D W+ G + E+
Sbjct: 196 -NAMHYNQTVDIWSVGCIMAELL 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 109 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 163
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 164 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 214
Query: 1046 AYEIF 1050
+E+
Sbjct: 215 VWELM 219
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +Y+RE + + Q+ +G+ +L R HRDL + N+L+ T +
Sbjct: 109 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-----KTPQHVK 163
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG G + A+ GG V P +A + + +SD W+ G
Sbjct: 164 ITDFG--LAKLLGAEEKEYHAE---GGKV----PIKWMALESILHRIYTHQSDVWSYGVT 214
Query: 1567 AYEIF 1571
+E+
Sbjct: 215 VWELM 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.036, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + G V M PE + G
Sbjct: 161 -----VDGMLKLIDFGIANQMQPDXXXVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 212
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 272 VLKCCLKRDPKQRIS 286
Score = 37.4 bits (85), Expect = 0.084, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + ER + +LE V ++ H H DLK N L+
Sbjct: 103 IYMVMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + G V M PE + G
Sbjct: 161 -----VDGMLKLIDFGIANQMQPDXXXVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 212
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 100 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 159
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 160 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 204
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 262
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 263 EVSEEVKMLIRNLLKTEPTQR 283
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 100 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 159
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 160 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 204
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 234
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 949 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI 1008
+L+ ++ L+ HRD+KSD+ILL + D ++ ++DFG + +
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILL--THDG---RVKLSDFGFCAQVSKEVPRRKX---- 306
Query: 1009 ELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
L G MAPE L S + Y + D W+ G + E+ + P++ + +
Sbjct: 307 -LVGTPYWMAPE-------LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPL 353
Query: 1068 NALPQLNTNVPEVMRRL----------VAKLLENDPSDRPSA 1099
A+ + N+P ++ L + +LL DP+ R +A
Sbjct: 354 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA 395
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 32/172 (18%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
+LFT + + V +L+ HRDLK NIL E + I DFG + ++
Sbjct: 121 VLFT-ITKTVEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLRA------ 172
Query: 1004 SSADIELGGNVALMAP--EVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSA 1060
N LM P P + Y + D W+ G + Y + PF
Sbjct: 173 --------ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224
Query: 1061 RNTDYEVNALPQLNT-----------NVPEVMRRLVAKLLENDPSDRPSAEL 1101
+T E+ L ++ + +V + + LV+K+L DP R +A L
Sbjct: 225 DDTPEEI--LARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAAL 274
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 240
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 300 VLKCCLKRDPKQRIS 314
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GTVNYMPPEAIKDMSSSRENGKS 240
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL G+ + + R HRDLK N+L+ N +L I DFG + G+ ++ + +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLA--RAFGIPVRKYTHE 160
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + AP+V + + YS + D W+ G + E+ + P + D
Sbjct: 161 VV---TLWYRAPDVLMGSK------KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQL 210
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L +S P+ E+ +D F T YE + E L
Sbjct: 211 MR--IFRILGTPNSKNWPNVT--ELPKYDPNF------TVYEPLPWESFLKGLDESGIDL 260
Query: 1648 VAKLLENDPSDRPSAELA 1665
++K+L+ DP+ R +A+ A
Sbjct: 261 LSKMLKLDPNQRITAKQA 278
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL G+ + + R HRDLK N+L+ N +L I DFG YT++
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLARAFGIPVRKYTHEV- 161
Query: 999 LSMQYSSADIELG 1011
+++ Y + D+ +G
Sbjct: 162 VTLWYRAPDVLMG 174
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 174
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-QSARNTDYE 1066
+ G MAPEV T + K D W+ G +A E+ + P+ ++ Y
Sbjct: 175 X-MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 1067 V--NALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAE 1100
+ N P+L + + R + + LE D R SA+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK 265
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 174
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G MAPEV T + K D W+ G +A E+ + P+
Sbjct: 175 X-MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 175
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-QSARNTDYE 1066
+ G MAPEV T + K D W+ G +A E+ + P+ ++ Y
Sbjct: 176 X-MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 1067 V--NALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAE 1100
+ N P+L + + R + + LE D R SA+
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK 266
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+ L+ + L+ ++ HRD+KSDNILL + +TDFG + ++ + S
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFC----AQITPEQSKRS 175
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G MAPEV T + K D W+ G +A E+ + P+
Sbjct: 176 X-MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 29/166 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 166
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 167 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
Query: 1059 SARNTDYEVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
+ + EV A+ + P M L+ D +RP
Sbjct: 217 GMKGS--EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 260
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 166
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 167 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
Query: 1580 SARNTD 1585
+ ++
Sbjct: 217 GMKGSE 222
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + A L G +APE+ L+
Sbjct: 190 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGATWTLCGTPEYLAPEIILSK-- 234
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 235 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 289
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 290 LRNLLQVDLTKR 301
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + A L G +APE+ L+
Sbjct: 190 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGATWTLCGTPEYLAPEIILSK-- 234
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 235 -----GYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 90 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 149
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 150 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 194
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 252
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 253 EVSEEVKMLIRNLLKTEPTQR 273
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 90 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 149
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 150 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 194
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 91 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 150
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 151 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 253
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 254 EVSEEVKMLIRNLLKTEPTQR 274
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 91 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 150
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 151 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 82 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 141 LV--GENHL---VKVADFGLSRLMTGDTFTAHAGAKF----PIKWTAPES-------LAY 184
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMR 244
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 245 ACWQWNPSDRPS 256
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HRDL + N
Sbjct: 82 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 141 LV--GENHL---VKVADFGLSRLMTGDTFTAHAGAKF----PIKWTAPES-------LAY 184
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 29/166 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 110 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 162
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 163 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
Query: 1059 SARNTDYEVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
+ + EV A+ + P M L+ D +RP
Sbjct: 213 GMKGS--EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 256
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 110 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 162
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 163 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
Query: 1580 SARNTD 1585
+ ++
Sbjct: 213 GMKGSE 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 92 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 151
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 152 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 196
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 254
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 255 EVSEEVKMLIRNLLKTEPTQR 275
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 92 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 151
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 152 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 196
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 226
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 128 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 180
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 181 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
Query: 1059 SARNTDYEVNAL 1070
+ + EV A+
Sbjct: 231 GMKGS--EVTAM 240
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 128 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 180
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 181 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
Query: 1580 SARNTD 1585
+ ++
Sbjct: 231 GMKGSE 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 29/166 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 108 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 160
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 161 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
Query: 1059 SARNTDYEVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
+ + EV A+ + P M L+ D +RP
Sbjct: 211 GMKGS--EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 254
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 108 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 160
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 161 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
Query: 1580 SARNTD 1585
+ ++
Sbjct: 211 GMKGSE 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 29/166 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 172
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 173 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
Query: 1059 SARNTDYEVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
+ + EV A+ + P M L+ D +RP
Sbjct: 223 GMKGS--EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 266
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 172
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 173 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
Query: 1580 SARNTD 1585
+ ++
Sbjct: 223 GMKGSE 228
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
R+ +L + + + + +Q+ G+ +L HRDL + N L+ + + I DFG
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN-----LLVKIGDFG 178
Query: 991 SSYTNKSGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVA 1046
S YS+ +GG+ L M PE + F+ ++SD W+ G +
Sbjct: 179 MSRD-------VYSTDYYRVGGHTMLPIRWMPPESIMYRK--FT----TESDVWSFGVIL 225
Query: 1047 YEIFGH-DNPFYQ 1058
+EIF + P++Q
Sbjct: 226 WEIFTYGKQPWFQ 238
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
R+ +L + + + + +Q+ G+ +L HRDL + N L+ + + I DFG
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN-----LLVKIGDFG 178
Query: 1512 SSYTNKSGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVA 1567
S YS+ +GG+ L M PE + F+ ++SD W+ G +
Sbjct: 179 MSRD-------VYSTDYYRVGGHTMLPIRWMPPESIMYRK--FT----TESDVWSFGVIL 225
Query: 1568 YEIFGH-DNPFYQ 1579
+EIF + P++Q
Sbjct: 226 WEIFTYGKQPWFQ 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 85 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 144
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 145 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 189
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 247
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 248 EVSEEVKMLIRNLLKTEPTQR 268
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 85 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 144
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 145 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 189
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 219
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 96 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 150
Query: 983 QLVITDF-------GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 1035
+ + DF G +YT +G + P ++ +S
Sbjct: 151 -VKVADFGLSRLMTGDTYTAPAGAKFP------------------IKWTAPESLAYNKFS 191
Query: 1036 -KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLE 1090
KSD W G + +EI + +P+ + YE+ + + PE + L+ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 251
Query: 1091 NDPSDRPS 1098
+PSDRPS
Sbjct: 252 WNPSDRPS 259
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 34/135 (25%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 96 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 150
Query: 1504 QLVITDF-------GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 1556
+ + DF G +YT +G + P ++ +S
Sbjct: 151 -VKVADFGLSRLMTGDTYTAPAGAKFP------------------IKWTAPESLAYNKFS 191
Query: 1557 -KSDAWTAGTVAYEI 1570
KSD W G + +EI
Sbjct: 192 IKSDVWAFGVLLWEI 206
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 144 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 188
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 246
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQR 267
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 144 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 188
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.7 bits (86), Expect = 0.055, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
LF Q+ +GV +++ + +RDLK NI L ++ Q+ I DFG + K+ S
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK-----QVKIGDFGLVTSLKNDGKRXRS 181
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGH--DNPFYQSAR 1061
G + M+PE S +Y K D + G + E+ H D F S
Sbjct: 182 K------GTLRYMSPE-------QISSQDYGKEVDLYALGLILAELL-HVCDTAFETSKF 227
Query: 1062 NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-SAELAATVCQLYLWAPKHWLYGA 1120
TD + + + + L+ KLL P DRP ++E+ T L +W
Sbjct: 228 FTDLRDGIISDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRT---LTVWK-------K 274
Query: 1121 TPSHNE 1126
+P NE
Sbjct: 275 SPEKNE 280
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 182
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 183 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 1059 SARNTDYEVNAL 1070
+ + EV A+
Sbjct: 233 GMKGS--EVTAM 242
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 182
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 183 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 1580 SARNTD 1585
+ ++
Sbjct: 233 GMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 182
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 183 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 1059 SARNTDYEVNAL 1070
+ + EV A+
Sbjct: 233 GMKGS--EVTAM 242
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 182
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 183 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 1580 SARNTD 1585
+ ++
Sbjct: 233 GMKGSE 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 983 QLVITDF-------GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 1035
+ + DF G +YT +G + P ++ +S
Sbjct: 152 -VKVADFGLSRLMTGDTYTAPAGAKFP------------------IKWTAPESLAYNKFS 192
Query: 1036 -KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVAKLLE 1090
KSD W G + +EI + +P+ + YE+ + + PE + L+ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 1091 NDPSDRPS 1098
+PSDRPS
Sbjct: 253 WNPSDRPS 260
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 34/135 (25%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + ++ +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 97 NLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHL-- 151
Query: 1504 QLVITDF-------GSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 1556
+ + DF G +YT +G + P ++ +S
Sbjct: 152 -VKVADFGLSRLMTGDTYTAPAGAKFP------------------IKWTAPESLAYNKFS 192
Query: 1557 -KSDAWTAGTVAYEI 1570
KSD W G + +EI
Sbjct: 193 IKSDVWAFGVLLWEI 207
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL G+ + + R HRDLK N+L+ N +L I DFG + G+ ++ + +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLA--RAFGIPVRKYTHE 160
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + AP+V + + YS + D W+ G + E+ + P + D
Sbjct: 161 VV---TLWYRAPDVLMGSK------KYSTTIDIWSVGCIFAEMV-NGAPLFPGVSEADQL 210
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L +S P+ E+ +D F T YE + E L
Sbjct: 211 MR--IFRILGTPNSKNWPNVT--ELPKYDPNF------TVYEPLPWESFLKGLDESGIDL 260
Query: 1648 VAKLLENDPSDRPSAELA 1665
++K+L+ DP+ R +A+ A
Sbjct: 261 LSKMLKLDPNQRITAKQA 278
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL G+ + + R HRDLK N+L+ N +L I DFG YT++
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLI-----NREGELKIADFGLARAFGIPVRKYTHEV- 161
Query: 999 LSMQYSSADIELG 1011
+++ Y + D+ +G
Sbjct: 162 VTLWYRAPDVLMG 174
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 969
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1026
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSY-QMALAPVVVTLWYRAPEVLLQS- 186
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIF 1050
+ D W+ G + E+F
Sbjct: 187 -----TYATPVDMWSVGCIFAEMF 205
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 1490
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1547
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSY-QMALAPVVVTLWYRAPEVLLQS- 186
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIF 1571
+ D W+ G + E+F
Sbjct: 187 -----TYATPVDMWSVGCIFAEMF 205
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 972
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 973 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
++ + D L + DFG S+ N Q S E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMTEXVATRWYRAPEVMLTS 197
Query: 1026 PGLFSFVNYSKS-DAWTAGTVAYEIF 1050
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
Score = 37.7 bits (86), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 1493
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 1494 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
++ + D L + DFG S+ N Q S E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMTEXVATRWYRAPEVMLTS 197
Query: 1547 PGLFSFVNYSKS-DAWTAGTVAYEIF 1571
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 972
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 973 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1025
++ + D L + DFG S+ N Q S E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMTEYVATRWYRAPEVMLTS 197
Query: 1026 PGLFSFVNYSKS-DAWTAGTVAYEIF 1050
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 25/146 (17%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFT-QLLEGVTHLNMHRTAHRDLKSDNIL 1493
++I+ + TDL + Q+ + I F Q L V L+ HRDLK N+L
Sbjct: 88 EVYIIQELMQTDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 1494 LDCSEDNTCPQLVITDFG-------SSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 1546
++ + D L + DFG S+ N Q S E APEV L +
Sbjct: 145 INSNCD-----LKVCDFGLARIIDESAADNSEPTGQQ--SGMTEYVATRWYRAPEVMLTS 197
Query: 1547 PGLFSFVNYSKS-DAWTAGTVAYEIF 1571
YS++ D W+ G + E+F
Sbjct: 198 ------AKYSRAMDVWSCGCILAELF 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 22/195 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 974
++++M+ N DL ++L+++ + + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 975 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1029
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GAVNYMPPEAIKDMSSSRENGKS 240
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL--PQLNTNVPEV----MRR 1083
KSD W+ G + Y + PF Q N +++A+ P P++ ++
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 1084 LVAKLLENDPSDRPS 1098
++ L+ DP R S
Sbjct: 300 VLKCCLKRDPKQRIS 314
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLD 1495
++++M+ N DL ++L+++ + + ER + +LE V ++ H H DLK N L+
Sbjct: 131 IYMVMECGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 1496 CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV-----ALATPGLF 1550
L + DFG + + + + + G V M PE + G
Sbjct: 189 -----VDGMLKLIDFGIANQMQPDTTSVVKDSQV---GAVNYMPPEAIKDMSSSRENGKS 240
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 1579
KSD W+ G + Y + PF Q
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 969
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPEVALATPG 1027
NIL +T G+ GL+ YS V L APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQS-- 186
Query: 1028 LFSFVNYSKSDAWTAGTVAYEIF 1050
+ D W+ G + E+F
Sbjct: 187 ----TYATPVDMWSVGCIFAEMF 205
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 1490
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL--MAPEVALATPG 1548
NIL +T G+ GL+ YS V L APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQS-- 186
Query: 1549 LFSFVNYSKSDAWTAGTVAYEIF 1571
+ D W+ G + E+F
Sbjct: 187 ----TYATPVDMWSVGCIFAEMF 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 472 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 524
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 525 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
Query: 1059 SARNTDYEVNAL 1070
+ + EV A+
Sbjct: 575 GMKGS--EVTAM 584
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 472 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 524
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 525 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
Query: 1580 SARNTD 1585
+ ++
Sbjct: 575 GMKGSE 580
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G++ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G++ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 473 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 525
Query: 1003 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1058
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 526 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
Query: 1059 SARNTDYEVNAL 1070
+ + EV A+
Sbjct: 576 GMKGS--EVTAM 585
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 21/126 (16%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S ++
Sbjct: 473 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLSKALRA--DEN 525
Query: 1524 YSSADIELGGNVALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPFYQ 1579
Y A V APE +NY SKSD W+ G + +E F + Y+
Sbjct: 526 YYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
Query: 1580 SARNTD 1585
+ ++
Sbjct: 576 GMKGSE 581
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 146 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 190
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 248
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQR 269
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 146 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 190
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL----- 1016
AHRD KS N+L+ + Q I D G + + G S +++G N +
Sbjct: 135 AHRDFKSRNVLVKSN-----LQCCIADLGLAVMHSQG------SDYLDIGNNPRVGTKRY 183
Query: 1017 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1049
MAPEV F +Y +D W G V +EI
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 1483 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL----- 1537
AHRD KS N+L+ + Q I D G + + G S +++G N +
Sbjct: 135 AHRDFKSRNVLVKSN-----LQCCIADLGLAVMHSQG------SDYLDIGNNPRVGTKRY 183
Query: 1538 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEI 1570
MAPEV F +Y +D W G V +EI
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 923 NTDLRNYL-RERCAQLSMHERIL------------LFTQLLEGVTHLNMHRTAHRDLKSD 969
NTD+ YL E C + ER++ + +L V + + AHRDLK +
Sbjct: 78 NTDI--YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 135
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N L D+ L + DFG + K G M+ G ++P+V GL+
Sbjct: 136 NFLF--LTDSPDSPLKLIDFGLAARFKPGKMMRTKV------GTPYYVSPQV---LEGLY 184
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--------ALPQLN-TNVPEV 1080
+ D W+AG + Y + PF + TD EV P+ + NV
Sbjct: 185 G----PECDEWSAGVMMYVLLCGYPPF---SAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 237
Query: 1081 MRRLVAKLLENDPSDR 1096
L+ +LL P R
Sbjct: 238 AESLIRRLLTKSPKQR 253
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 30/147 (20%)
Query: 1444 NTDLRNYL-RERCAQLSMHERIL------------LFTQLLEGVTHLNMHRTAHRDLKSD 1490
NTD+ YL E C + ER++ + +L V + + AHRDLK +
Sbjct: 78 NTDI--YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 135
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N L D+ L + DFG + K G M+ G ++P+V GL+
Sbjct: 136 NFLF--LTDSPDSPLKLIDFGLAARFKPGKMMRTKV------GTPYYVSPQV---LEGLY 184
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+AG + Y + PF
Sbjct: 185 G----PECDEWSAGVMMYVLLCGYPPF 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 969
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1026
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSY-QMALDPVVVTLWYRAPEVLLQS- 186
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIF 1050
+ D W+ G + E+F
Sbjct: 187 -----TYATPVDMWSVGCIFAEMF 205
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 1490
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 82 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 141
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1547
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 142 NIL-------------VTSGGTVKLADFGLARIYSY-QMALDPVVVTLWYRAPEVLLQS- 186
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIF 1571
+ D W+ G + E+F
Sbjct: 187 -----TYATPVDMWSVGCIFAEMF 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 911 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 969
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 90 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1026
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 150 NIL-------------VTSGGTVKLADFGLARIYSY-QMALTPVVVTLWYRAPEVLLQS- 194
Query: 1027 GLFSFVNYSKSDAWTAGTVAYEIF 1050
+ D W+ G + E+F
Sbjct: 195 -----TYATPVDMWSVGCIFAEMF 213
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL-LFTQLLEGVTHLNMHRTAHRDLKSD 1490
R + + ++ + + DLR YL + E I L Q L G+ L+ + HRDLK +
Sbjct: 90 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM---APEVALATP 1547
NIL +T G+ GL+ YS + L V + APEV L +
Sbjct: 150 NIL-------------VTSGGTVKLADFGLARIYSY-QMALTPVVVTLWYRAPEVLLQS- 194
Query: 1548 GLFSFVNYSKSDAWTAGTVAYEIF 1571
+ D W+ G + E+F
Sbjct: 195 -----TYATPVDMWSVGCIFAEMF 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 923 NTDLRNYL-RERCAQLSMHERIL------------LFTQLLEGVTHLNMHRTAHRDLKSD 969
NTD+ YL E C + ER++ + +L V + + AHRDLK +
Sbjct: 95 NTDI--YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 152
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
N L D+ L + DFG + K G M+ G ++P+V GL+
Sbjct: 153 NFLF--LTDSPDSPLKLIDFGLAARFKPGKMMRTKV------GTPYYVSPQV---LEGLY 201
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--------ALPQLN-TNVPEV 1080
+ D W+AG + Y + PF + TD EV P+ + NV
Sbjct: 202 G----PECDEWSAGVMMYVLLCGYPPF---SAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 254
Query: 1081 MRRLVAKLLENDPSDR 1096
L+ +LL P R
Sbjct: 255 AESLIRRLLTKSPKQR 270
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 30/147 (20%)
Query: 1444 NTDLRNYL-RERCAQLSMHERIL------------LFTQLLEGVTHLNMHRTAHRDLKSD 1490
NTD+ YL E C + ER++ + +L V + + AHRDLK +
Sbjct: 95 NTDI--YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 152
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
N L D+ L + DFG + K G M+ G ++P+V GL+
Sbjct: 153 NFLF--LTDSPDSPLKLIDFGLAARFKPGKMMRTKV------GTPYYVSPQV---LEGLY 201
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ D W+AG + Y + PF
Sbjct: 202 G----PECDEWSAGVMMYVLLCGYPPF 224
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 146 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 190
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 248
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQR 269
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 146 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 190
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 275
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 276 RISAKAA 282
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 214
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 215 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 264
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 265 LSQMLHYDPNKRISAKAA 282
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
Score = 37.0 bits (84), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 171
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 172 VTLWYRAPEILLG 184
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 171
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 172 VTLWYRAPEILLG 184
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ + +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYTHE 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 275
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 276 RISAKAA 282
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 165
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 166 VTLWYRAPEILLG 178
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ + +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYTHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 171
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 172 VTLWYRAPEILLG 184
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 171
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 172 VTLWYRAPEILLG 184
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK +N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 275
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 276 RISAKAA 282
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK +N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 214
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 215 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 264
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 265 LSQMLHYDPNKRISAKAA 282
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+ L+ + L+ ++ HRD+KSDNILL + +TDFG S + +
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFCAQITPEQSKRST--- 175
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-QSARNTDYE 1066
+ G MAPEV T + K D W+ G +A E+ + P+ ++ Y
Sbjct: 176 --MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 1067 V--NALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAE 1100
+ N P+L + + R + + L+ D R SA+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK 265
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+ L+ + L+ ++ HRD+KSDNILL + +TDFG S + +
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFCAQITPEQSKRST--- 175
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G MAPEV T + K D W+ G +A E+ + P+
Sbjct: 176 --MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 164
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 165 VTLWYRAPEILLG 177
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 163
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 164 VTLWYRAPEILLG 176
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK +N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK +N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 213
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 214 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 263
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 264 LSQMLHYDPNKRISAKAA 281
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 916 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 976 SEDNTCPQLVITDFGSSY 993
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1437 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 1496
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 1497 SEDNTCPQLVITDFGSSY 1514
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLARASE 184
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1050
S + G A MAPE TP KSD ++ G V EI
Sbjct: 185 KFAQTVMXS---RIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 228
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLARASE 184
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1571
S + G A MAPE TP KSD ++ G V EI
Sbjct: 185 KFAQTVMXS---RIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 228
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 217 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 276
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 277 RISAKAA 283
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK +N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 215
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 216 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 265
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 266 LSQMLHYDPNKRISAKAA 283
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 998
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 168
Query: 999 LSMQYSSADIELG 1011
+++ Y + +I LG
Sbjct: 169 VTLWYRAPEILLG 181
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG---------SSYTNKSG 1519
QLL+G+ + HR HRDLK N+L+ NT + + DFG +YT++
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLARAFGVPVRTYTHEV- 168
Query: 1520 LSMQYSSADIELG 1532
+++ Y + +I LG
Sbjct: 169 VTLWYRAPEILLG 181
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 189
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 190 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 234
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 292
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 293 EVSEEVKMLIRNLLKTEPTQR 313
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 189
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 190 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 234
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 136 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 195
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 196 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 240
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 298
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 299 EVSEEVKMLIRNLLKTEPTQR 319
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 136 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 195
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 196 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 240
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPFY 270
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 907 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLN-MHRTAH 963
G + N +FI M+ T L++R Q + ERIL + +++ + +L H H
Sbjct: 91 GTFITNTDVFIAMELMGT-CAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148
Query: 964 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1023
RD+K NILLD Q+ + DFG SG + + D G A MAPE
Sbjct: 149 RDVKPSNILLD-----ERGQIKLCDFGI-----SGRLVDDKAKD-RSAGCAAYMAPE--R 195
Query: 1024 ATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV 1067
P + +Y ++D W+ G E+ P+ TD+EV
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC--KTDFEV 238
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 1428 GGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERIL--LFTQLLEGVTHLN-MHRTAH 1484
G + N +FI M+ T L++R Q + ERIL + +++ + +L H H
Sbjct: 91 GTFITNTDVFIAMELMGT-CAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148
Query: 1485 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 1544
RD+K NILLD Q+ + DFG SG + + D G A MAPE
Sbjct: 149 RDVKPSNILLD-----ERGQIKLCDFGI-----SGRLVDDKAKD-RSAGCAAYMAPE--R 195
Query: 1545 ATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPF 1577
P + +Y ++D W+ G E+ P+
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I FG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILGFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I FG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILGFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLAGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLAGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLA---R 181
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + + G A MAPE TP KSD ++ G V EI
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 228
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLA---R 181
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + + G A MAPE TP KSD ++ G V EI
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 228
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 31/201 (15%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L + +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 130 GRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKP 189
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG + S S+ +APEV
Sbjct: 190 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 234
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN-PEW-S 292
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 293 EVSEEVKXLIRNLLKTEPTQR 313
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 17/150 (11%)
Query: 1431 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 1489
GR L + +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 130 GRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKP 189
Query: 1490 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+N+L N L +TDFG + S S+ +APEV
Sbjct: 190 ENLLYTSKRPNAI--LKLTDFGFAKETTSHNSLTTPCY------TPYYVAPEV------- 234
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y KS D W+ G + Y + PFY
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPFY 264
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+ L+ + L+ ++ HR++KSDNILL + +TDFG S + +
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILLGMD-----GSVKLTDFGFCAQITPEQSKRST--- 176
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFY-QSARNTDYE 1066
+ G MAPEV T + K D W+ G +A E+ + P+ ++ Y
Sbjct: 177 --MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 1067 V--NALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAE 1100
+ N P+L + + R + + LE D R SA+
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK 266
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+ L+ + L+ ++ HR++KSDNILL + +TDFG S + +
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILLGMD-----GSVKLTDFGFCAQITPEQSKRST--- 176
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G MAPEV T + K D W+ G +A E+ + P+
Sbjct: 177 --MVGTPYWMAPEV--VTRKAYG----PKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In
Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In
Complex With Indirubin E804
Length = 383
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QL V ++ HRD+K N+L++ S+DNT L + DFGS+ K + + S A
Sbjct: 149 QLFRAVGFIHSLGICHRDIKPQNLLVN-SKDNT---LKLCDFGSA---KKLIPSEPSVAX 201
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE-IFGHDNPFYQSARNTDY 1065
I + APE+ L Y+ S D W+ G V E I G P + + D
Sbjct: 202 I---CSRFYRAPELMLGA------TEYTPSIDLWSIGCVFGELILG--KPLFSGETSIDQ 250
Query: 1066 EVNALPQLNTNVPEVMRRL 1084
V + + T E M R+
Sbjct: 251 LVRIIQIMGTPTKEQMIRM 269
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QL V ++ HRD+K N+L++ S+DNT L + DFGS+ K + + S A
Sbjct: 149 QLFRAVGFIHSLGICHRDIKPQNLLVN-SKDNT---LKLCDFGSA---KKLIPSEPSVAX 201
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
I + APE+ L Y+ S D W+ G V E+
Sbjct: 202 I---CSRFYRAPELMLGA------TEYTPSIDLWSIGCVFGELI 236
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 916 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 976 SEDNTCPQLVITDFGSSY 993
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1437 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 1496
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 1497 SEDNTCPQLVITDFGSSY 1514
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 916 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 976 SEDNTCPQLVITDFGSSY 993
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1437 FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 1496
F++M ++ +DL+ + S + L ++L+ + +++ H H D+K+ N+LL+
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 1497 SEDNTCPQLVITDFGSSY 1514
+ Q+ + D+G +Y
Sbjct: 188 KNPD---QVYLVDYGLAY 202
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 912 NMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDN 970
N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK +N
Sbjct: 134 NSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 971 ILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 1030
+L+D + +TDF G + + L G +APE+ L+
Sbjct: 193 LLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK----- 234
Query: 1031 FVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAK 1087
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L+
Sbjct: 235 --GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 292
Query: 1088 LLENDPSDR 1096
LL+ D + R
Sbjct: 293 LLQVDLTKR 301
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 1433 NMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDN 1491
N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK +N
Sbjct: 134 NSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 1492 ILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 1551
+L+D + +TDF G + + L G +APE+ L+
Sbjct: 193 LLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK----- 234
Query: 1552 FVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 235 --GYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K DN+LLD L + DFG+ +++G+ ++ G ++PEV
Sbjct: 197 HRDVKPDNMLLD-----KHGHLKLADFGTCMKMDETGMVHCDTAV-----GTPDYISPEV 246
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1060
L + G + + D W+ G +E+ D PFY +
Sbjct: 247 -LKSQGGDGYYG-RECDWWSVGVFLFEMLVGDTPFYADS 283
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYT-NKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K DN+LLD L + DFG+ +++G+ ++ G ++PEV
Sbjct: 197 HRDVKPDNMLLD-----KHGHLKLADFGTCMKMDETGMVHCDTAV-----GTPDYISPEV 246
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 1581
L + G + + D W+ G +E+ D PFY +
Sbjct: 247 -LKSQGGDGYYG-RECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 275
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 276 RISAKAA 282
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 214
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 215 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 264
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 265 LSQMLHYDPNKRISAKAA 282
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 217 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 276
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 277 RISAKAA 283
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 215
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 216 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 265
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 266 LSQMLHYDPNKRISAKAA 283
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDAGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDAGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLA---R 175
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1050
+ + G A MAPE TP KSD ++ G V EI
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 222
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLA---R 175
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ + G A MAPE TP KSD ++ G V EI
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALRGEITP---------KSDIYSFGVVLLEII 222
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 167
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 168 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 219 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 278
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 279 RISAKAA 285
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 167
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 168 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 217
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 218 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 267
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 268 LSQMLHYDPNKRISAKAA 285
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + ++ +LL+ TQ+ + +L HR+L + N
Sbjct: 330 FYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 388
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 389 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPES-------LAY 432
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 492
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 493 ACWQWNPSDRPS 504
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + ++ +LL+ TQ+ + +L HR+L + N
Sbjct: 330 FYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 388
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 389 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPES-------LAY 432
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 433 NKFSIKSDVWAFGVLLWEI 451
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + ++ +LL+ TQ+ + +L HR+L + N
Sbjct: 288 FYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 346
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 347 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPES-------LAY 390
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 450
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 451 ACWQWNPSDRPS 462
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 1437 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 1492
F ++ ++ T +L +YLRE C + ++ +LL+ TQ+ + +L HR+L + N
Sbjct: 288 FYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 346
Query: 1493 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1552
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 347 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPES-------LAY 390
Query: 1553 VNYS-KSDAWTAGTVAYEI 1570
+S KSD W G + +EI
Sbjct: 391 NKFSIKSDVWAFGVLLWEI 409
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 275
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 276 RISAKAA 282
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 165 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 214
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 215 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 264
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 265 LSQMLHYDPNKRISAKAA 282
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
QLL+G+ + HR HRDLK N+L+ NT + + DFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG 148
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 213
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 214 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 263
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 264 LSQMLHYDPNKRISAKAA 281
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 218
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----------DNPFY 1057
+ GN L P +A +F+ V +SD W+ G +E+F D+ FY
Sbjct: 219 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 276
Query: 1058 QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ + ++ P+ + P M ++ + DP RP+
Sbjct: 277 KMIKEGFRMLS--PE---HAPAEMYDIMKTCWDADPLKRPT 312
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 218
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ GN L P +A +F+ V +SD W+ G +E+F
Sbjct: 219 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 223
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----------DNPFY 1057
+ GN L P +A +F+ V +SD W+ G +E+F D+ FY
Sbjct: 224 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 1058 QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ + ++ P+ + P M ++ + DP RP+
Sbjct: 282 KMIKEGFRMLS--PE---HAPAEMYDIMKTCWDADPLKRPT 317
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 223
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ GN L P +A +F+ V +SD W+ G +E+F
Sbjct: 224 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 927 RNYLRERCAQLSMHERILLFTQLLE--GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 984
RNY R + A + ++ LF QL+ G HL HRD+K N+L++ D T L
Sbjct: 117 RNYYRRQVAPPPILIKVFLF-QLIRSIGCLHLPSVNVCHRDIKPHNVLVN-EADGT---L 171
Query: 985 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAG 1043
+ DFGS + + S ++ NVA + A +F +Y+ + D W+ G
Sbjct: 172 KLCDFGS--------AKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVG 219
Query: 1044 TVAYE------IFGHDN 1054
+ E IF DN
Sbjct: 220 CIFAEMMLGEPIFRGDN 236
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 1448 RNYLRERCAQLSMHERILLFTQLLE--GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQL 1505
RNY R + A + ++ LF QL+ G HL HRD+K N+L++ D T L
Sbjct: 117 RNYYRRQVAPPPILIKVFLF-QLIRSIGCLHLPSVNVCHRDIKPHNVLVN-EADGT---L 171
Query: 1506 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAG 1564
+ DFGS + + S ++ NVA + A +F +Y+ + D W+ G
Sbjct: 172 KLCDFGS--------AKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVG 219
Query: 1565 TVAYE------IFGHDN 1575
+ E IF DN
Sbjct: 220 CIFAEMMLGEPIFRGDN 236
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 165
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 217 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 276
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 277 RISAKAA 283
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 165
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 215
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 216 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 265
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 266 LSQMLHYDPNKRISAKAA 283
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 162
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 163 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 214 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 273
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 274 RISAKAA 280
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 162
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 163 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 212
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 213 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 262
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 263 LSQMLHYDPNKRISAKAA 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLXGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLXGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
QLL+G+ + HR HRDLK N+L+ NT + + DFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG 148
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 162 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 206
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 207 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 261
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 262 LRNLLQVDLTKR 273
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 162 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 206
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 207 -----GYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDRGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDRGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 275 RISAKAA 281
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 163
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 164 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 213
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 214 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 263
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 264 LSQMLHYDPNKRISAKAA 281
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 277
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 278 RISAKAA 284
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 166
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 167 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 216
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 217 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 266
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 267 LSQMLHYDPNKRISAKAA 284
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 217 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 276
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 277 RISAKAA 283
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG G+ ++ +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFG--LARAFGVPVRTYXHE 165
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 166 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 215
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 216 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 265
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 266 LSQMLHYDPNKRISAKAA 283
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 216
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----------DNPFY 1057
+ GN L P +A +F+ V +SD W+ G +E+F D+ FY
Sbjct: 217 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 1058 QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ + ++ P+ + P M ++ + DP RP+
Sbjct: 275 KMIKEGFRMLS--PE---HAPAEMYDIMKTCWDADPLKRPT 310
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 216
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ GN L P +A +F+ V +SD W+ G +E+F
Sbjct: 217 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 162
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYE------IFGHDNPFYQSA 1060
+ + APE+ L YS + D W+ G + E +F D+ Q
Sbjct: 163 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 1061 R-----NTDYE-----VNALPQLNTNVP---------------EVMRRLVAKLLENDPSD 1095
R T E V ++P + P E R L++++L DP+
Sbjct: 214 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 273
Query: 1096 RPSAELA 1102
R SA+ A
Sbjct: 274 RISAKAA 280
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + HR HRDLK N+L+ NT + + DFG + G+ ++ +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLI-----NTEGAIKLADFGLA--RAFGVPVRTYXHE 162
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
+ + APE+ L YS + D W+ G + E+ + D
Sbjct: 163 VV---TLWYRAPEILLGCK------YYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQL 212
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRL 1647
R +++ L P + + P + D+ +P L+ E R L
Sbjct: 213 FR--IFRTLGTPDEVVWPGVTSMPDY---KPSFPKWARQDFS-KVVPPLD----EDGRSL 262
Query: 1648 VAKLLENDPSDRPSAELA 1665
++++L DP+ R SA+ A
Sbjct: 263 LSQMLHYDPNKRISAKAA 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 155 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWTLCGTPEYLAPEIILSK-- 199
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 200 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 254
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 255 LRNLLQVDLTKR 266
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 155 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWTLCGTPEYLAPEIILSK-- 199
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 200 -----GYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 27/174 (15%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
Q+ G+ ++ HRDL+S NIL+ C I DFG + + A
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRSANILV--GNGLICK---IADFGLARLIEDNEXTARQGA 166
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
+ APE AL G F+ KSD W+ G + E+ Y N +
Sbjct: 167 KFP----IKWTAPEAALY--GRFTI----KSDVWSFGILLTELVTKGRVPYPGMNNRE-- 214
Query: 1067 VNALPQLN--------TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWA 1112
L Q+ + P + L+ + DP +RP+ E + + Y A
Sbjct: 215 --VLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTA 266
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDGGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I D G + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDGGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DF + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFYLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ C +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DF + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFYLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ D+ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ D+ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARHIK-------NDSN 223
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----------DNPFY 1057
+ GN L P +A +F+ V +SD W+ G +E+F D+ FY
Sbjct: 224 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 1058 QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ + ++ P+ + P M ++ + DP RP+
Sbjct: 282 KMIKEGFRMLS--PE---HAPAEMYDIMKTCWDADPLKRPT 317
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARHIK-------NDSN 223
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ GN L P +A +F+ V +SD W+ G +E+F
Sbjct: 224 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 156 PENLLID-----EQGYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 200
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 201 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 255
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 256 LRNLLQVDLTKR 267
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 156 PENLLID-----EQGYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 200
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 201 -----GYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ D+ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ D+ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWTLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.5 bits (75), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWTLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 200
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----------DNPFY 1057
+ GN L P +A +F+ V +SD W+ G +E+F D+ FY
Sbjct: 201 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 1058 QSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
+ + ++ P+ + P M ++ + DP RP+
Sbjct: 259 KMIKEGFRMLS--PE---HAPAEMYDIMKTCWDADPLKRPT 294
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
Q+ +G+ L HRDL + NILL I DFG + K + ++
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITK-----ICDFGLARDIK-------NDSN 200
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
+ GN L P +A +F+ V +SD W+ G +E+F
Sbjct: 201 YVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 916 FILMKKYNT--DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNI 971
F ++ ++ T +L +YLRE C + + +LL+ TQ+ + +L HR+L + N
Sbjct: 291 FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNC 349
Query: 972 LLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 1031
L+ E++ + + DFG S ++ A + APE ++
Sbjct: 350 LV--GENHL---VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPES-------LAY 393
Query: 1032 VNYS-KSDAWTAGTVAYEIFGHD-NPFYQSARNTDYEV---NALPQLNTNVPEVMRRLVA 1086
+S KSD W G + +EI + +P+ + YE+ + + PE + L+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 453
Query: 1087 KLLENDPSDRPS 1098
+ +PSDRPS
Sbjct: 454 ACWQWNPSDRPS 465
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 27/137 (19%)
Query: 925 DLRNYLRERCAQ---------LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
DL N+LR + L + + + +Q+ +G+ L HRD+ + N+LL
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 187
Query: 976 SEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
I DFG N S ++ GN L P +A +F V
Sbjct: 188 GHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIFDCVY 231
Query: 1034 YSKSDAWTAGTVAYEIF 1050
+SD W+ G + +EIF
Sbjct: 232 TVQSDVWSYGILLWEIF 248
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 27/137 (19%)
Query: 1446 DLRNYLRERCAQ---------LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 1496
DL N+LR + L + + + +Q+ +G+ L HRD+ + N+LL
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 187
Query: 1497 SEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
I DFG N S ++ GN L P +A +F V
Sbjct: 188 GHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIFDCVY 231
Query: 1555 YSKSDAWTAGTVAYEIF 1571
+SD W+ G + +EIF
Sbjct: 232 TVQSDVWSYGILLWEIF 248
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 269
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 270 LRNLLQVDLTKR 281
Score = 33.5 bits (75), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 170 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 214
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 215 -----GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEALAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEALAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1028
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIF 1050
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 --DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGL 1549
DC +L I DFG + D E+ G VA APE+ L
Sbjct: 159 NEDC-------ELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML----- 195
Query: 1550 FSFVNYSKS-DAWTAGTVAYEIF 1571
++++Y+++ D W+ G + E+
Sbjct: 196 -NWMHYNQTVDIWSVGCIMAELL 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 82/223 (36%), Gaps = 50/223 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
L+++ + TDL + ++ +S +L G+ L+ HRDL NILL
Sbjct: 108 KLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
+ D T + ++ NK+ Y + + APE+ + G V
Sbjct: 168 ADNNDITICDFNLAREDTADANKT----HYVT-------HRWYRAPELVMQFKGFTKLV- 215
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF----YQSARNTDYEVNALPQLN--------------- 1074
D W+AG V E+F F + + N EV P++
Sbjct: 216 ----DMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR 271
Query: 1075 ---TNVPE------------VMRRLVAKLLENDPSDRPSAELA 1102
+NVP V L+AK+LE +P R S E A
Sbjct: 272 NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 89/243 (36%), Gaps = 48/243 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
L+++ + TDL + ++ +S +L G+ L+ HRDL NILL
Sbjct: 108 KLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
+ D T + ++ NK+ Y + + APE+ + G V
Sbjct: 168 ADNNDITICDFNLAREDTADANKT----HYVT-------HRWYRAPELVMQFKGFTKLV- 215
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFG 1614
D W+AG V E+F RK L++ + + V
Sbjct: 216 ----DMWSAGCVMAEMFN----------------RKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 1615 HDNPFYQSARNTDYEVNALPQLNTNVPE------------VMRRLVAKLLENDPSDRPSA 1662
D + S DY N+L +NVP V L+AK+LE +P R S
Sbjct: 256 EDVVMFSSPSARDYLRNSL----SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311
Query: 1663 ELA 1665
E A
Sbjct: 312 EQA 314
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 95/262 (36%), Gaps = 62/262 (23%)
Query: 1319 IQIGKFIAKGTNAVVYEATFRGV-------EYALKMMFNYSAASNSHAILKAMSXXXXXX 1371
+Q GK + G V EAT G+ + A+KM+ + + A A++ +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI----- 102
Query: 1372 XXXXXXXXDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYG 1431
+ +L H N+V + A T P + + L
Sbjct: 103 --------------MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL----------- 137
Query: 1432 RNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDN 1491
L L +K DL +E L + + + +Q+ +G+ L HRD+ + N
Sbjct: 138 ----LNFLRRKAEADLD---KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 190
Query: 1492 ILLDCSEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1549
+LL I DFG N S ++ GN L P +A +
Sbjct: 191 VLLTNGHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESI 234
Query: 1550 FSFVNYSKSDAWTAGTVAYEIF 1571
F V +SD W+ G + +EIF
Sbjct: 235 FDCVYTVQSDVWSYGILLWEIF 256
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 27/137 (19%)
Query: 925 DLRNYLRERCAQ---------LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
DL N+LR + L + + + +Q+ +G+ L HRD+ + N+LL
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 195
Query: 976 SEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
I DFG N S ++ GN L P +A +F V
Sbjct: 196 GHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIFDCVY 239
Query: 1034 YSKSDAWTAGTVAYEIF 1050
+SD W+ G + +EIF
Sbjct: 240 TVQSDVWSYGILLWEIF 256
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 41/175 (23%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
L+++++ ++D + R +H + LL+ LL GV +++ HRDLK N L+
Sbjct: 131 ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN-LLVGVKYVHSAGILHRDLKPANCLV 189
Query: 974 --DCSEDNTCPQLVITDFGSSYT------NKSGLSMQYSSADI-------------ELGG 1012
DCS + + DFG + T S L + D+ +L G
Sbjct: 190 NQDCS-------VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTG 242
Query: 1013 NVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFG--HDNPFYQSAR 1061
+V APE+ L NY+++ D W+ G + E+ +N Y + R
Sbjct: 243 HVVTRWYRAPELILLQE------NYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 41/175 (23%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
L+++++ ++D + R +H + LL+ LL GV +++ HRDLK N L+
Sbjct: 131 ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN-LLVGVKYVHSAGILHRDLKPANCLV 189
Query: 1495 --DCSEDNTCPQLVITDFGSSYT------NKSGLSMQYSSADI-------------ELGG 1533
DCS + + DFG + T S L + D+ +L G
Sbjct: 190 NQDCS-------VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTG 242
Query: 1534 NVA---LMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFG--HDNPFYQSAR 1582
+V APE+ L NY+++ D W+ G + E+ +N Y + R
Sbjct: 243 HVVTRWYRAPELILLQE------NYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 82/223 (36%), Gaps = 50/223 (22%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
L+++ + TDL + ++ +S +L G+ L+ HRDL NILL
Sbjct: 108 KLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1033
+ D T + ++ NK+ Y + + APE+ + G V
Sbjct: 168 ADNNDITICDFNLAREDTADANKT----HYVT-------HRWYRAPELVMQFKGFTKLV- 215
Query: 1034 YSKSDAWTAGTVAYEIFGHDNPF----YQSARNTDYEVNALPQLN--------------- 1074
D W+AG V E+F F + + N EV P++
Sbjct: 216 ----DMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR 271
Query: 1075 ---TNVPE------------VMRRLVAKLLENDPSDRPSAELA 1102
+NVP V L+AK+LE +P R S E A
Sbjct: 272 NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 89/243 (36%), Gaps = 48/243 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
L+++ + TDL + ++ +S +L G+ L+ HRDL NILL
Sbjct: 108 KLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 1554
+ D T + ++ NK+ Y + + APE+ + G V
Sbjct: 168 ADNNDITICDFNLAREDTADANKT----HYVT-------HRWYRAPELVMQFKGFTKLV- 215
Query: 1555 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSSTTPSTVAYEIFG 1614
D W+AG V E+F RK L++ + + V
Sbjct: 216 ----DMWSAGCVMAEMFN----------------RKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 1615 HDNPFYQSARNTDYEVNALPQLNTNVPE------------VMRRLVAKLLENDPSDRPSA 1662
D + S DY N+L +NVP V L+AK+LE +P R S
Sbjct: 256 EDVVMFSSPSARDYLRNSL----SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311
Query: 1663 ELA 1665
E A
Sbjct: 312 EQA 314
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 953 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1012
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 183
Query: 1013 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARN-----TDY 1065
+APE+ FS D W G + +E+ +PF S+ N DY
Sbjct: 184 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 1066 EVNALPQLNTNVPEVMRRLVAKLLEN----DPSDR 1096
+ + +P M A +L++ DP +R
Sbjct: 238 LFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKER 272
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 1474 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1533
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 183
Query: 1534 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARNTDYWHRKW 1591
+APE+ FS D W G + +E+ +PF S+ N D +
Sbjct: 184 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 1592 LWQ 1594
L+Q
Sbjct: 238 LFQ 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 165 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 212 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 264
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 265 DLKDLLRNLLQVDLTKR 281
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 165 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 212 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 157 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 203
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 204 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 256
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 257 DLKDLLRNLLQVDLTKR 273
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 157 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 203
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 204 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 185 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 231
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 232 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 284
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 285 DLKDLLRNLLQVDLTKR 301
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 185 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 231
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 232 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 159 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 205
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 206 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 258
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 259 DLKDLLRNLLQVDLTKR 275
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 159 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 205
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 206 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 159 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 196
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELL 217
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N+ +
Sbjct: 101 DVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
N +L I DFG + D E+ G VA APE+ L +
Sbjct: 159 -----NEDXELKILDFGLA-----------RHTDDEMTGYVATRWYRAPEIML------N 196
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELL 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 936 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG--SSY 993
QLS + + +Q+ +G+ L HRD+ + N+LL I DFG
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK-----IGDFGLARDI 216
Query: 994 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1050
N S ++ GN L P +A +F V +SD W+ G + +EIF
Sbjct: 217 MNDSNYIVK---------GNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 1457 QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG--SSY 1514
QLS + + +Q+ +G+ L HRD+ + N+LL I DFG
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK-----IGDFGLARDI 216
Query: 1515 TNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF 1571
N S ++ GN L P +A +F V +SD W+ G + +EIF
Sbjct: 217 MNDSNYIVK---------GNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + ++
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLARASE 175
Query: 997 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1050
S + G A APE TP KSD ++ G V EI
Sbjct: 176 KFAQXVXXS---RIVGTTAYXAPEALRGEITP---------KSDIYSFGVVLLEII 219
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
LS H R + G+ L+ + HRD+KS NILLD E T I+DFG + ++
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLD--EAFTAK---ISDFGLARASE 175
Query: 1518 SGLSMQYSSADIELGGNVALMAPEVALA--TPGLFSFVNYSKSDAWTAGTVAYEIF 1571
S + G A APE TP KSD ++ G V EI
Sbjct: 176 KFAQXVXXS---RIVGTTAYXAPEALRGEITP---------KSDIYSFGVVLLEII 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 28/141 (19%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 101 DVYLVTHLMGADLNNIVKSQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 156
Query: 974 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1030
+ED+ +L I DFG D E+ G VA APE+ L +
Sbjct: 157 AVNEDS---ELKILDFGLC-----------RHTDDEMTGYVATRWYRAPEIML------N 196
Query: 1031 FVNYSKS-DAWTAGTVAYEIF 1050
+++Y+++ D W+ G + E+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELL 217
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 28/141 (19%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
++++ DL N ++ + +L+ L Q+L G+ +++ HRDLK N L
Sbjct: 101 DVYLVTHLMGADLNNIVKSQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--L 156
Query: 1495 DCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA---LMAPEVALATPGLFS 1551
+ED+ +L I DFG D E+ G VA APE+ L +
Sbjct: 157 AVNEDS---ELKILDFGLC-----------RHTDDEMTGYVATRWYRAPEIML------N 196
Query: 1552 FVNYSKS-DAWTAGTVAYEIF 1571
+++Y+++ D W+ G + E+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELL 217
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 264 DLKDLLRNLLQVDLTKR 280
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + +TDF G + + L G +APE+
Sbjct: 164 YRDLKPENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 211 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 64/168 (38%), Gaps = 33/168 (19%)
Query: 943 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1002
I L Q+ G+ +L HRDL + N+LL T I+DFG S L
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLS----KALRAD 164
Query: 1003 YSSADIELGGN--VALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPF 1056
+ + G V APE +NY SKSD W+ G + +E F +
Sbjct: 165 ENXYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Query: 1057 YQSARNTDYEVNALPQLN------TNVPEVMRRLVAKLLENDPSDRPS 1098
Y+ + + EV A+ + P M L+ D +RP
Sbjct: 215 YRGMKGS--EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG 260
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 1464 ILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 1523
I L Q+ G+ +L HRDL + N+LL T I+DFG S L
Sbjct: 114 IELVHQVSMGMKYLEESNFVHRDLAARNVLL-----VTQHYAKISDFGLS----KALRAD 164
Query: 1524 YSSADIELGGN--VALMAPEVALATPGLFSFVNY----SKSDAWTAGTVAYEIFGHDNPF 1577
+ + G V APE +NY SKSD W+ G + +E F +
Sbjct: 165 ENXYKAQTHGKWPVKWYAPEC----------INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Query: 1578 YQSARNTD 1585
Y+ + ++
Sbjct: 215 YRGMKGSE 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 185
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1052
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 186 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 233
Query: 1053 -DNPFYQ 1058
P+YQ
Sbjct: 234 GKQPWYQ 240
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 185
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1573
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 186 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 233
Query: 1574 -DNPFYQ 1579
P+YQ
Sbjct: 234 GKQPWYQ 240
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 179
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1052
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 180 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 227
Query: 1053 -DNPFYQ 1058
P+YQ
Sbjct: 228 GKQPWYQ 234
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 179
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1573
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 180 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 227
Query: 1574 -DNPFYQ 1579
P+YQ
Sbjct: 228 GKQPWYQ 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 31/141 (21%)
Query: 925 DLRNYLRERC-------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
DL N+LR + + LS + + +Q+ +G+ L HRD+ + N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 972 LLDCSEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
LL I DFG N S ++ GN L P +A +F
Sbjct: 196 LLTNGHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIF 239
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 240 DCVYTVQSDVWSYGILLWEIF 260
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 31/141 (21%)
Query: 1446 DLRNYLRERC-------------AQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
DL N+LR + + LS + + +Q+ +G+ L HRD+ + N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 1493 LLDCSEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
LL I DFG N S ++ GN L P +A +F
Sbjct: 196 LLTNGHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIF 239
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 240 DCVYTVQSDVWSYGILLWEIF 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 1468 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1527
+++ + L+ +RDLK DN+LLD + C + DFG K G+ ++A
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLD--HEGHCK---LADFGMC---KEGICNGVTTA 182
Query: 1528 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYW 1587
G +APE+ L + D W G + YE+ PF A N D
Sbjct: 183 --TFCGTPDYIAPEI------LQEMLYGPAVDWWAMGVLLYEMLCGHAPF--EAENEDDL 232
Query: 1588 HRKWLWQHLVYSHSSTTPSTVAYEIFGHDNP 1618
L +VY +T + F NP
Sbjct: 233 FEAILNDEVVYPTWLHEDATGILKSFMTKNP 263
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Query: 947 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSA 1006
+++ + L+ +RDLK DN+LLD + C + DFG K G+ ++A
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLD--HEGHCK---LADFGMC---KEGICNGVTTA 182
Query: 1007 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 1066
G +APE+ L + D W G + YE+ PF A N D
Sbjct: 183 --TFCGTPDYIAPEI------LQEMLYGPAVDWWAMGVLLYEMLCGHAPF--EAENEDDL 232
Query: 1067 VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 1103
A+ P + +L++ + P+ L +
Sbjct: 233 FEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGS 269
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 937 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 996
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 208
Query: 997 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1052
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 209 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 256
Query: 1053 -DNPFYQ 1058
P+YQ
Sbjct: 257 GKQPWYQ 263
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 1458 LSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 1517
L + + + + +Q+ G+ +L HRDL + N L+ + I DFG S
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV-----GQGLVVKIGDFGMSRDI- 208
Query: 1518 SGLSMQYSSADIELGGNVAL----MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGH 1573
YS+ +GG L M PE L F+ ++SD W+ G V +EIF +
Sbjct: 209 ------YSTDYYRVGGRTMLPIRWMPPESILYRK--FT----TESDVWSFGVVLWEIFTY 256
Query: 1574 -DNPFYQ 1579
P+YQ
Sbjct: 257 GKQPWYQ 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 1474 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1533
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 168
Query: 1534 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARNTDYWHRKW 1591
+APE+ FS D W G + +E+ +PF S+ N D +
Sbjct: 169 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 1592 LWQ 1594
L+Q
Sbjct: 223 LFQ 225
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 953 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1012
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 168
Query: 1013 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARN-----TDY 1065
+APE+ FS D W G + +E+ +PF S+ N DY
Sbjct: 169 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 1066 EVNALPQLNTNVPEVMRRLVAKLLEN----DPSDR 1096
+ + +P + A +L++ DP +R
Sbjct: 223 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLEND 1092
+ LL+ D
Sbjct: 269 LRNLLQVD 276
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + Y++ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + Y++ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 1474 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1533
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 172
Query: 1534 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARNTDYWHRKW 1591
+APE+ FS D W G + +E+ +PF S+ N D +
Sbjct: 173 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 1592 LWQ 1594
L+Q
Sbjct: 227 LFQ 229
Score = 33.9 bits (76), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 953 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1012
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--XFCG 172
Query: 1013 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARN-----TDY 1065
+APE+ FS D W G + +E+ +PF S+ N DY
Sbjct: 173 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 1066 EVNALPQLNTNVPEVMRRLVAKLLEN----DPSDR 1096
+ + +P + A +L++ DP +R
Sbjct: 227 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 1474 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1533
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--TFCG 215
Query: 1534 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARNTDYWHRKW 1591
+APE+ FS D W G + +E+ +PF S+ N D +
Sbjct: 216 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
Query: 1592 LWQ 1594
L+Q
Sbjct: 270 LFQ 272
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 953 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 1012
+ +L+ +RDLK DN+LLD + +TD+G K GL +++ G
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMC---KEGLRPGDTTS--TFCG 215
Query: 1013 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF--YQSARN-----TDY 1065
+APE+ FS D W G + +E+ +PF S+ N DY
Sbjct: 216 TPNYIAPEILRGEDYGFSV------DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
Query: 1066 EVNALPQLNTNVPEVMRRLVAKLLEN----DPSDR 1096
+ + +P + A +L++ DP +R
Sbjct: 270 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
QLL+G+ + ++ HRDLK N+L+ N QL + DFG G+ + S++
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLI-----NKRGQLKLGDFG--LARAFGIPVNTFSSE 168
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1050
+ + AP+V + + YS S D W+ G + E+
Sbjct: 169 VV---TLWYRAPDVLMGS------RTYSTSIDIWSCGCILAEMI 203
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 1469 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
QLL+G+ + ++ HRDLK N+L+ N QL + DFG G+ + S++
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLI-----NKRGQLKLGDFG--LARAFGIPVNTFSSE 168
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
+ + AP+V + + YS S D W+ G + E+
Sbjct: 169 VV---TLWYRAPDVLMGS------RTYSTSIDIWSCGCILAEMI 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+L + + + + + HRD+K +N+L+ +L I DFG S + L +
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADFGWS-VHAPSLRRR-- 170
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
+ G + + PE+ + K D W AG + YE PF +
Sbjct: 171 ----XMCGTLDYLPPEMIEGK------THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
Query: 1065 YE--VNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
+ VN + + + + L++KLL P R
Sbjct: 221 HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILL--FTQLLEGVTHLNMHRTAHRDLKSD 969
+M +++ ++ + L + R + ++ER ++ Q+ E + L+ H H D++ +
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE 131
Query: 970 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
NI+ +T I +FG + K G + + + APE
Sbjct: 132 NIIYQTRRSSTIK---IIEFGQARQLKPGDNFR-----------LLFTAPEYYAPEVHQH 177
Query: 1030 SFVNYSKSDAWTAGTVAYEIFGHDNPF--------YQSARNTDY--EVNALPQLNTNVPE 1079
V+ + +D W+ GT+ Y + NPF ++ N +Y + A +++ +
Sbjct: 178 DVVS-TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 1080 VMRRLVAK 1087
+ RL+ K
Sbjct: 237 FVDRLLVK 244
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 17/147 (11%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILL--FTQLLEGVTHLNMHRTAHRDLKSD 1490
+M +++ ++ + L + R + ++ER ++ Q+ E + L+ H H D++ +
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE 131
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
NI+ +T I +FG + K G + + + APE
Sbjct: 132 NIIYQTRRSSTIK---IIEFGQARQLKPGDNFR-----------LLFTAPEYYAPEVHQH 177
Query: 1551 SFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
V+ + +D W+ GT+ Y + NPF
Sbjct: 178 DVVS-TATDMWSLGTLVYVLLSGINPF 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 926 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 985
L +++RE +L + + Q+ +G+++L R HRDL + N+L+ +
Sbjct: 105 LLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPN-----HVK 159
Query: 986 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1045
ITDFG + + ++ GG V P +A + +SD W+ G
Sbjct: 160 ITDFGLARLLDIDETEYHAD-----GGKV----PIKWMALESILRRRFTHQSDVWSYGVT 210
Query: 1046 AYEIF 1050
+E+
Sbjct: 211 VWELM 215
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1447 LRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 1506
L +++RE +L + + Q+ +G+++L R HRDL + N+L+ +
Sbjct: 105 LLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPN-----HVK 159
Query: 1507 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTV 1566
ITDFG + + ++ GG V P +A + +SD W+ G
Sbjct: 160 ITDFGLARLLDIDETEYHAD-----GGKV----PIKWMALESILRRRFTHQSDVWSYGVT 210
Query: 1567 AYEIF 1571
+E+
Sbjct: 211 VWELM 215
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + + DF G + + L G +APE+ L+
Sbjct: 169 PENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 908 GYGRNMSL-FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 966
G+ N+SL F M+ TDL +++ L+ L+G+ +L+ H HRDL
Sbjct: 82 GHKSNISLVFDFME---TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL 138
Query: 967 KSDNILLDCSEDNTCPQLVITDFG 990
K +N+LLD E+ L + DFG
Sbjct: 139 KPNNLLLD--ENGV---LKLADFG 157
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 1429 GYGRNMSL-FILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDL 1487
G+ N+SL F M+ TDL +++ L+ L+G+ +L+ H HRDL
Sbjct: 82 GHKSNISLVFDFME---TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL 138
Query: 1488 KSDNILLDCSEDNTCPQLVITDFG 1511
K +N+LLD E+ L + DFG
Sbjct: 139 KPNNLLLD--ENGV---LKLADFG 157
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 20/154 (12%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+L + + + + + HRD+K +N+L+ +L I DFG S S
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADFGWSVHAPSLRRRX-- 172
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD 1064
+ G + + PE+ + K D W AG + YE PF +
Sbjct: 173 -----MCGTLDYLPPEMIEGK------THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
Query: 1065 YE--VNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
+ VN + + + + L++KLL P R
Sbjct: 222 HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 26/169 (15%)
Query: 944 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 1003
+LFT + + V +L+ HRDLK NIL E + I DFG + ++ +
Sbjct: 121 VLFT-ITKTVEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 1004 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT 1063
+ +APEV L G + D W+ G + Y PF +T
Sbjct: 179 TPC-----YTANFVAPEV-LERQGYD-----AACDIWSLGVLLYTXLTGYTPFANGPDDT 227
Query: 1064 DYEVNALPQLNT-----------NVPEVMRRLVAKLLENDPSDRPSAEL 1101
E+ L ++ + +V + + LV+K L DP R +A L
Sbjct: 228 PEEI--LARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAAL 274
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 27/194 (13%)
Query: 918 LMKKYNTDLRNYLRERCAQLSMHERILL--FTQLLEGVTHLNMHRTAHRDLKSDNILLDC 975
L +K N L++++ RC+ + L F Q+ E V L+ HRDLK NI
Sbjct: 142 LCRKEN--LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199
Query: 976 SEDNTCPQLVITDFGSSYTNKSGLSMQ--------YSSADIELGGNVALMAPEVALATPG 1027
+ + + DFG Q Y++ ++G + M+PE
Sbjct: 200 DD-----VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKL-YMSPEQIHGN-- 251
Query: 1028 LFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSAR-NTDYEVNALPQLNTNVPEVMRRLV 1085
NYS K D ++ G + +E+ + + R TD P L T +V
Sbjct: 252 -----NYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMV 306
Query: 1086 AKLLENDPSDRPSA 1099
+L P++RP A
Sbjct: 307 QDMLSPSPTERPEA 320
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
Length = 337
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 97/267 (36%), Gaps = 75/267 (28%)
Query: 1319 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSXXXXXXXXXXXXX 1378
IQ+ K I KG V+ +RG + A+K+ F AS
Sbjct: 39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEAS----------------------- 75
Query: 1379 XDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFI 1438
+ V++ H F+ ++ I + +L Y N SL+
Sbjct: 76 ------WFRETEIYQTVLMRHENILGFI-----AADIKGTGSWTQLYLITDYHENGSLYD 124
Query: 1439 LMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMH--------RTAHRDLKSD 1490
+K D ++ L+ + +S G+ HL+ AHRDLKS
Sbjct: 125 YLKSTTLDAKSMLKLAYSSVS-------------GLCHLHTEIFSTQGKPAIAHRDLKSK 171
Query: 1491 NILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GNVALMAPEVA 1543
NIL+ ++ TC I D GL++++ S E+ G M PEV
Sbjct: 172 NILV--KKNGTC---CIADL--------GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 1544 LATPGLFSFVNYSKSDAWTAGTVAYEI 1570
+ F +Y +D ++ G + +E+
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEV 245
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 71/235 (30%)
Query: 909 YGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMH--------R 960
Y N SL+ +K D ++ L+ + +S G+ HL+
Sbjct: 116 YHENGSLYDYLKSTTLDAKSMLKLAYSSVS-------------GLCHLHTEIFSTQGKPA 162
Query: 961 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG-------GN 1013
AHRDLKS NIL+ ++ TC I D GL++++ S E+ G
Sbjct: 163 IAHRDLKSKNILV--KKNGTC---CIADL--------GLAVKFISDTNEVDIPPNTRVGT 209
Query: 1014 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG---------------HD----N 1054
M PEV + F +Y +D ++ G + +E+ HD +
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269
Query: 1055 PFYQSARNTDYEVNALPQLNTNVP------EVMRRLVAKLLENDPSDRPSAELAA 1103
P Y+ R E+ + +L + P E +R++ KL+ + P++ L A
Sbjct: 270 PSYEDMR----EIVCIKKLRPSFPNRWSSDECLRQM-GKLMTECWAHNPASRLTA 319
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 29/158 (18%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 183
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEIFGHDNPFYQSARNT--- 1063
G + M+PE T +YS +SD W+ G E+ P + +
Sbjct: 184 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
Query: 1064 ---DYEVNA-LPQLNTNVPEV-MRRLVAKLLENDPSDR 1096
DY VN P+L + V + + V K L +P++R
Sbjct: 233 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 270
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 183
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 184 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 215
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 23/137 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1022
+RDLK +N+L+D + + DF G + + L G +APE+
Sbjct: 165 YRDLKPENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 1023 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPE 1079
L+ Y+K+ D W G + YE+ PF+ YE V+ + ++
Sbjct: 212 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 264
Query: 1080 VMRRLVAKLLENDPSDR 1096
++ L+ LL+ D + R
Sbjct: 265 DLKDLLRNLLQVDLTKR 281
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 21/96 (21%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 1543
+RDLK +N+L+D + + DF G + + L G +APE+
Sbjct: 165 YRDLKPENLLIDQQ-----GYIKVADF--------GFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 1544 LATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
L+ Y+K+ D W G + YE+ PF+
Sbjct: 212 LSK-------GYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NIL+ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANILISATN-----AVKVVDFGIARAIADSGNSVXQTAAVI---GTAQYLSPEQ 190
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF---------YQSARNTDYEVNALPQ 1072
A V+ ++SD ++ G V YE+ + PF YQ R +A +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 1073 -LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 1113
L+ ++ V+ + +AK EN + +AE+ A + +++ P
Sbjct: 245 GLSADLDAVVLKALAKNPEN--RYQTAAEMRADLVRVHNGEP 284
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 53/196 (27%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K NIL+ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANILISATN-----AVKVVDFGIARAIADSGNSVXQTAAVI---GTAQYLSPEQ 190
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSS 1602
A V+ ++SD ++ G V YE+ + PF +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPF-----------------------TG 221
Query: 1603 TTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR--P 1660
+P +VAY+ D P SAR+ + + +V K L +P +R
Sbjct: 222 DSPVSVAYQHVRED-PIPPSARHEGLSAD------------LDAVVLKALAKNPENRYQT 268
Query: 1661 SAELAATVCQLYLWAP 1676
+AE+ A + +++ P
Sbjct: 269 AAEMRADLVRVHNGEP 284
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 31/141 (21%)
Query: 925 DLRNYLRERCAQL-------------SMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
DL N+LR + L S + + +Q+ +G+ L HRD+ + N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 972 LLDCSEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1029
LL I DFG N S ++ GN L P +A +F
Sbjct: 196 LLTNGHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIF 239
Query: 1030 SFVNYSKSDAWTAGTVAYEIF 1050
V +SD W+ G + +EIF
Sbjct: 240 DCVYTVQSDVWSYGILLWEIF 260
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 31/141 (21%)
Query: 1446 DLRNYLRERCAQL-------------SMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
DL N+LR + L S + + +Q+ +G+ L HRD+ + N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 1493 LLDCSEDNTCPQLVITDFG--SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 1550
LL I DFG N S ++ GN L P +A +F
Sbjct: 196 LLTNGHVAK-----IGDFGLARDIMNDSNYIVK---------GNARL--PVKWMAPESIF 239
Query: 1551 SFVNYSKSDAWTAGTVAYEIF 1571
V +SD W+ G + +EIF
Sbjct: 240 DCVYTVQSDVWSYGILLWEIF 260
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ ++
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDEMANEFV--- 167
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAG--TVAYEIFGHDNPFYQSARNTD 1064
G + M+PE T +YS +SD W+ G V + + P D
Sbjct: 168 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLD 216
Query: 1065 YEVNA-LPQLNTNVPEV-MRRLVAKLLENDPSDR 1096
Y VN P+L + V + + V K L +P++R
Sbjct: 217 YIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ ++
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDEMANEFV--- 167
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 168 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 199
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 909 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 967
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 968 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1027
+N+L+D + +TDF G + + L G +AP + L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPAIILSK-- 213
Query: 1028 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRL 1084
Y+K+ D W G + YE+ PF+ YE V+ + ++ ++ L
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL 268
Query: 1085 VAKLLENDPSDR 1096
+ LL+ D + R
Sbjct: 269 LRNLLQVDLTKR 280
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 1430 YGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLK 1488
+ N +L+++M+ ++ ++LR R + S Q++ +L+ +RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 1489 SDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 1548
+N+L+D + +TDF G + + L G +AP + L+
Sbjct: 169 PENLLIDQQ-----GYIQVTDF--------GFAKRVKGRTWXLCGTPEYLAPAIILSK-- 213
Query: 1549 LFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
Y+K+ D W G + YE+ PF+
Sbjct: 214 -----GYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 931 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 990
+E L + + + +Q+ +G+ L HRD+ + N+LL I DFG
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK-----IGDFG 203
Query: 991 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1048
N S ++ GN L P +A +F V +SD W+ G + +E
Sbjct: 204 LARDIMNDSNYIVK---------GNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 1049 IF 1050
IF
Sbjct: 253 IF 254
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 1452 RERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 1511
+E L + + + +Q+ +G+ L HRD+ + N+LL I DFG
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK-----IGDFG 203
Query: 1512 --SSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYE 1569
N S ++ GN L P +A +F V +SD W+ G + +E
Sbjct: 204 LARDIMNDSNYIVK---------GNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 1570 IF 1571
IF
Sbjct: 253 IF 254
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 1473 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 1532
G+ +L+ HRDL + N +L +ED T + + DFG LS + S D
Sbjct: 149 GMEYLSSRNFIHRDLAARNCML--AEDMT---VCVADFG--------LSRKIYSGDYYRQ 195
Query: 1533 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWL 1592
G + + P LA L + SD W G +EI Y N + +
Sbjct: 196 GCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------I 248
Query: 1593 WQHLVYSHSSTTPSTVAYEIF 1613
+ +L+ + P E++
Sbjct: 249 YNYLIGGNRLKQPPECMEEVY 269
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 30/156 (19%)
Query: 912 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 971
+ ++++ TDL +R + +H++ +++ QL++ + +L+ HRD+K NI
Sbjct: 83 DRDVYLVFDYMETDLHAVIRANILE-PVHKQYVVY-QLIKVIKYLHSGGLLHRDMKPSNI 140
Query: 972 LLDCSEDNTCPQLVITDFGSS--------YTNKSGLSMQYSSADIE-----LGGNVAL-- 1016
LL+ C + + DFG S TN LS+ ++ + + L VA
Sbjct: 141 LLNAE----C-HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 1017 -MAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1050
APE+ L + Y+K D W+ G + EI
Sbjct: 196 YRAPEILLGS------TKYTKGIDMWSLGCILGEIL 225
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 30/156 (19%)
Query: 1433 NMSLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNI 1492
+ ++++ TDL +R + +H++ +++ QL++ + +L+ HRD+K NI
Sbjct: 83 DRDVYLVFDYMETDLHAVIRANILE-PVHKQYVVY-QLIKVIKYLHSGGLLHRDMKPSNI 140
Query: 1493 LLDCSEDNTCPQLVITDFGSS--------YTNKSGLSMQYSSADIE-----LGGNVAL-- 1537
LL+ C + + DFG S TN LS+ ++ + + L VA
Sbjct: 141 LLNAE----C-HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 1538 -MAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIF 1571
APE+ L + Y+K D W+ G + EI
Sbjct: 196 YRAPEILLGS------TKYTKGIDMWSLGCILGEIL 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 191
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 192 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 223
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 191
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 192 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
+ Q+ + +L+ HRD+K +N L N ++ + DFG S + +Y
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFS---TNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
+ G +APEV T + K DAW+AG + + + PF
Sbjct: 230 GMTTK-AGTPYFVAPEVLNTTNESYG----PKCDAWSAGVLLHLLLMGAVPF 276
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
+ Q+ + +L+ HRD+K +N L N ++ + DFG S + +Y
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFS---TNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 1526 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1577
+ G +APEV T + K DAW+AG + + + PF
Sbjct: 230 GMTTK-AGTPYFVAPEVLNTTNESYG----PKCDAWSAGVLLHLLLMGAVPF 276
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.1 bits (74), Expect = 1.6, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 31/169 (18%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+ G+ +L HRDL + N+LL I+DFG S G Y
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----YAKISDFGLS--KALGADDSYY 167
Query: 1005 SADIELGGNVALMAPEVALATPGLFSFVNY-SKSDAWTAGTVAYEIFGHDNPFYQSARNT 1063
+A + APE +F + S+SD W+ G +E + Y+ +
Sbjct: 168 TARSAGKWPLKWYAPEC-------INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG- 219
Query: 1064 DYEVNALPQLNTNVPEVMRRL-VAKLLENDPSDRPSAELAATVCQLYLW 1111
PEVM + K +E P P + C +Y W
Sbjct: 220 --------------PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 254
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL- 973
L+I+++ ++DL+ + H + +L+ LL G ++ HRDLK N LL
Sbjct: 107 LYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLL-GEKFIHESGIIHRDLKPANCLLN 165
Query: 974 -DCSEDNTCPQLVITDFGSSYTNKS 997
DCS + I DFG + T S
Sbjct: 166 QDCS-------VKICDFGLARTINS 183
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL- 1494
L+I+++ ++DL+ + H + +L+ LL G ++ HRDLK N LL
Sbjct: 107 LYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLL-GEKFIHESGIIHRDLKPANCLLN 165
Query: 1495 -DCSEDNTCPQLVITDFGSSYTNKS 1518
DCS + I DFG + T S
Sbjct: 166 QDCS-------VKICDFGLARTINS 183
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 53/196 (27%)
Query: 1484 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1542
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 190
Query: 1543 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYSHSS 1602
A V+ ++SD ++ G V YE+ + PF +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPF-----------------------TG 221
Query: 1603 TTPSTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR--P 1660
+P +VAY+ D P SAR+ + + +V K L +P +R
Sbjct: 222 DSPDSVAYQHVRED-PIPPSARHEGLSAD------------LDAVVLKALAKNPENRYQT 268
Query: 1661 SAELAATVCQLYLWAP 1676
+AE+ A + +++ P
Sbjct: 269 AAEMRADLVRVHNGEP 284
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 190
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF---------YQSARNTDYEVNALPQ 1072
A V+ ++SD ++ G V YE+ + PF YQ R +A +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHE 244
Query: 1073 -LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 1113
L+ ++ V+ + +AK EN + +AE+ A + +++ P
Sbjct: 245 GLSADLDAVVLKALAKNPEN--RYQTAAEMRADLVRVHNGEP 284
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 925 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 982
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 114 NLLDYLRE-CNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHV-- 168
Query: 983 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1042
+ + DFG S ++ A + APE +LA FS KSD W
Sbjct: 169 -VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPE-SLAY-NTFSI----KSDVWAF 217
Query: 1043 GTVAYEIFGHD-NPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 1098
G + +EI + +P+ + Y E + P + L+ + P+DRPS
Sbjct: 218 GVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 277
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 1446 DLRNYLRERCAQLSMHERILLF--TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP 1503
+L +YLRE C + + +LL+ TQ+ + +L HRDL + N L+ E++
Sbjct: 114 NLLDYLRE-CNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--GENHV-- 168
Query: 1504 QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 1563
+ + DFG S ++ A + APE +LA FS KSD W
Sbjct: 169 -VKVADFGLSRLMTGDTYTAHAGAKFP----IKWTAPE-SLAY-NTFSI----KSDVWAF 217
Query: 1564 GTVAYEI 1570
G + +EI
Sbjct: 218 GVLLWEI 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 165 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 196
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 190
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF---------YQSARNTDYEVNALPQ 1072
A V+ ++SD ++ G V YE+ + PF YQ R +A +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 1073 -LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 1113
L+ ++ V+ + +AK EN + +AE+ A + +++ P
Sbjct: 245 GLSADLDAVVLKALAKNPEN--RYQTAAEMRADLVRVHNGEP 284
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 190
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF---------YQSARNTDYEVNALPQ 1072
A V+ ++SD ++ G V YE+ + PF YQ R +A +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 1073 -LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 1113
L+ ++ V+ + +AK EN + +AE+ A + +++ P
Sbjct: 245 GLSADLDAVVLKALAKNPEN--RYQTAAEMRADLVRVHNGEP 284
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 226
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + M+PE T +YS +SD W+ G E+
Sbjct: 227 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 258
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+++G+T+L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 226
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + M+PE T +YS +SD W+ G E+
Sbjct: 227 ----GTRSYMSPERLQGT-------HYSVQSDIWSMGLSLVEM 258
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 139 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 190
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF---------YQSARNTDYEVNALPQ 1072
A V+ ++SD ++ G V YE+ + PF YQ R +A +
Sbjct: 191 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244
Query: 1073 -LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 1113
L+ ++ V+ + +AK EN + +AE+ A + +++ P
Sbjct: 245 GLSADLDAVVLKALAKNPEN--RYQTAAEMRADLVRVHNGEP 284
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 949 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+L G+ +L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 174
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1049
G + MAPE T +YS +SD W+ G E+
Sbjct: 175 ----GTRSYMAPERLQGT-------HYSVQSDIWSMGLSLVEL 206
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 1470 LLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1528
+L G+ +L H+ HRD+K NIL+ N+ ++ + DFG S ++ +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILV-----NSRGEIKLCDFGVSGQLIDSMANSFV--- 174
Query: 1529 IELGGNVALMAPEVALATPGLFSFVNYS-KSDAWTAGTVAYEI 1570
G + MAPE T +YS +SD W+ G E+
Sbjct: 175 ----GTRSYMAPERLQGT-------HYSVQSDIWSMGLSLVEL 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 963 HRDLKSDNILLDCSEDNTCPQLVITDFG-SSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
HRD+K NI++ + + + DFG + SG S+ ++A I G ++PE
Sbjct: 156 HRDVKPANIMISATN-----AVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQ 207
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPF 1056
A V+ ++SD ++ G V YE+ + PF
Sbjct: 208 ARG-----DSVD-ARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 925 DLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ 983
DL N+ C+ +LS+ ++L Q++ V ++ HRD+K DN L+ Q
Sbjct: 91 DLFNF----CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQ 144
Query: 984 LVITDFG 990
+ I DFG
Sbjct: 145 VYIIDFG 151
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 1446 DLRNYLRERCA-QLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQ 1504
DL N+ C+ +LS+ ++L Q++ V ++ HRD+K DN L+ Q
Sbjct: 91 DLFNF----CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQ 144
Query: 1505 LVITDFG 1511
+ I DFG
Sbjct: 145 VYIIDFG 151
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 948 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 1007
+L + + + + + HRD+K +N+L+ +L I DFG S + L +
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADFGWS-VHAPSLRRR----- 170
Query: 1008 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE- 1066
+ G + + PE+ + K D W AG + YE PF + +
Sbjct: 171 -XMCGTLDYLPPEMIEGK------THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 1067 -VNALPQLNTNVPEVMRRLVAKLLENDPSDR 1096
VN + + + + L++KLL P R
Sbjct: 224 IVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With A
Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A
Tetracyclic Atp Site Inhibitor
Length = 299
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 52/201 (25%)
Query: 910 GRNMSLFILMKKYNTDLRNYLRERCAQ-LSMHERILLFTQLLEGVTHLNMHRTAHRDLKS 968
GR L ++ +L + +++R Q + E + + E + +L+ AHRD+K
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 969 DNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 1028
+N+L N L +TDFG A T G
Sbjct: 146 ENLLYTSKRPNAI--LKLTDFG------------------------------FAKETTG- 172
Query: 1029 FSFVNYSKS-DAWTAGTVAYEIFGHDNPFYQS------------ARNTDYEVNALPQLNT 1075
Y KS D W+ G + Y + PFY + R YE P+ +
Sbjct: 173 ---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEW-S 227
Query: 1076 NVPEVMRRLVAKLLENDPSDR 1096
V E ++ L+ LL+ +P+ R
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQR 248
>pdb|1FYX|A Chain A, Crystal Structure Of P681h Mutant Of Tir Domain Of Human
Tlr2
Length = 149
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1551 SFVNYSKSDA-WTAGTVAYEIFGHDNPFYQSARNTDYWHRKWLWQHLVYS 1599
+FV+YS+ DA W + E+ + PF D+ H KW+ +++ S
Sbjct: 8 AFVSYSERDAYWVENLMVQELENFNPPFKLXLHKRDFIHGKWIIDNIIDS 57
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.2 bits (69), Expect = 5.7, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 915 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL- 973
L+I+++ ++DL+ + H + +L+ LL G ++ HRDLK N LL
Sbjct: 105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL-GENFIHESGIIHRDLKPANCLLN 163
Query: 974 -DCSEDNTCPQLVITDFGSSYTNKS 997
DCS + + DFG + T S
Sbjct: 164 QDCS-------VKVCDFGLARTINS 181
Score = 31.2 bits (69), Expect = 5.7, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 1436 LFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL- 1494
L+I+++ ++DL+ + H + +L+ LL G ++ HRDLK N LL
Sbjct: 105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL-GENFIHESGIIHRDLKPANCLLN 163
Query: 1495 -DCSEDNTCPQLVITDFGSSYTNKS 1518
DCS + + DFG + T S
Sbjct: 164 QDCS-------VKVCDFGLARTINS 181
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 945 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1004
L Q+L+G+ +L+ + HRDLK NIL+ E ++ I D G + S L
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLK---P 188
Query: 1005 SADIE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1057
AD++ + APE+ L +Y+K+ D W G + E+ + F+
Sbjct: 189 LADLDPVVVTFWYRAPELLLGA------RHYTKAIDIWAIGCIFAELLTSEPIFH 237
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 1466 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 1525
L Q+L+G+ +L+ + HRDLK NIL+ E ++ I D G + S L
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLK---P 188
Query: 1526 SADIE-LGGNVALMAPEVALATPGLFSFVNYSKS-DAWTAGTVAYEIFGHDNPFY 1578
AD++ + APE+ L +Y+K+ D W G + E+ + F+
Sbjct: 189 LADLDPVVVTFWYRAPELLLGA------RHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 974 DCSEDNTCPQLVITDFG 990
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 1495 DCSEDNTCPQLVITDFG 1511
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 974 DCSEDNTCPQLVITDFG 990
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 1495 DCSEDNTCPQLVITDFG 1511
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 974 DCSEDNTCPQLVITDFG 990
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 1495 DCSEDNTCPQLVITDFG 1511
+ D L + DFG
Sbjct: 159 --TRDGV---LKLADFG 170
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 914 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 973
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 98 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157
Query: 974 DCSEDNTCPQLVITDFG 990
+ D L + DFG
Sbjct: 158 --TRDGV---LKLADFG 169
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1435 SLFILMKKYNTDLRNYLRERCAQLSMHERILLFTQLLEGVTHLNMHRTAHRDLKSDNILL 1494
S++++ DL L + ++ E + LL G+ +++ ++ HRD+K+ N+L+
Sbjct: 98 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157
Query: 1495 DCSEDNTCPQLVITDFG 1511
+ D L + DFG
Sbjct: 158 --TRDGV---LKLADFG 169
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain
From Human
Length = 314
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 962 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 1021
AHRD KS N+LL D T V+ DFG + + G + + G MAPEV
Sbjct: 145 AHRDFKSKNVLL--KSDLTA---VLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEV 196
Query: 1022 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGH----DNPFYQSARNTDYEVNALPQLNTNV 1077
L F + + D + G V +E+ D P + + E+ P L
Sbjct: 197 -LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQ 255
Query: 1078 PEVMRRLVAKLLENDPSDRPS-AELAATVCQLY 1109
V+ + + +++ P A+L T+ + +
Sbjct: 256 EVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECW 288
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,030,374
Number of Sequences: 62578
Number of extensions: 2044158
Number of successful extensions: 9375
Number of sequences better than 100.0: 994
Number of HSP's better than 100.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 730
Number of HSP's that attempted gapping in prelim test: 5685
Number of HSP's gapped (non-prelim): 3360
length of query: 1751
length of database: 14,973,337
effective HSP length: 112
effective length of query: 1639
effective length of database: 7,964,601
effective search space: 13053981039
effective search space used: 13053981039
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)