BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3787
(263 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242005578|ref|XP_002423641.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
corporis]
gi|212506801|gb|EEB10903.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
corporis]
Length = 595
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 10/235 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L+ L+LS+NK+ S LP DM+ L + L +N+LT LP C L + LGFN I +
Sbjct: 219 LRDLNLSNNKITSSGLPDLFDMKKLEMIQLQHNKLTSLPCLRGCSELKEIHLGFNMIEEI 278
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ TL+ L ++NL+NN + E+ + +NL LDLS+N+L ++P LS L HL+ L
Sbjct: 279 TVEELSTLSHLKVINLRNNHLKELPKEISCFLNLVRLDLSNNDLMELPNTLSILPHLEIL 338
Query: 125 FLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLD 183
+ GN ++++R DI+ + R+++H+K L + S E D+Y +
Sbjct: 339 LVEGNSLRSIRKDIIHGGTHRLLNHLK---LTMPLAEAEKYLQSQYPCEKEEFPDRYAMR 395
Query: 184 RTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKLDR--TKTLTLCKVIN 234
+K L L + N+ ++V+ ++ CTI +++ K KL + T LCK +N
Sbjct: 396 CSKALNLSNKSLCNVSKAVFEEALAVP-CTI-VDLSKNKLLEIPSGTWLLCKTLN 448
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 28/165 (16%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMEN 66
+DLS NKL+ ++ ++L +LN+S NQL +P C NL +L + N I + +
Sbjct: 426 VDLSKNKLLEIPSGTWLLCKTLNDLNISCNQLQEIPAEIKTCLNLRYLNISHNNIKELPD 485
Query: 67 DY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL--- 101
++ L +L L NNKIS + + +L+NL +L
Sbjct: 486 EFAACTRLRELDISFNSFNQPPMCVYKFPALEILLLGNNKISFIDAE--ELLNLKMLTHL 543
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRII 146
DL++N LT++P + + L++L L GNP++ +R I+ +
Sbjct: 544 DLTNNNLTEIPPLIGKMTQLRTLKLEGNPLRVLRPAIIAKGTEAV 588
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L TL L HN L +SLP + + L LNLS N+L P+ + K L ++ L
Sbjct: 100 ILDSLVTLMLHHNNL--NSLPGELGQLTKLVTLNLSQNELHEFPMELSGMKELKNINLSS 157
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D+ L L+ L++ +NKI E+ +G L L L+LS N L+ +P E++S
Sbjct: 158 N-LCKIFPDFLYDLVLLNFLDISSNKIEEIKPGIGFLTRLVNLNLSHNNLSSIPLEITSC 216
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI 145
L+ L L N I + L D K++
Sbjct: 217 QALRDLNLSNNKITSSGLPDLFDMKKL 243
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 4 HLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
+L+ L++SHN + LP F L EL++S+N P+C L LLLG NKI
Sbjct: 469 NLRYLNISHNNI--KELPDEFAACTRLRELDISFNSFNQPPMCVYKFPALEILLLGNNKI 526
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
+ ++ + L L L+ L+L NN ++E+ +G + L L L N L
Sbjct: 527 SFIDAEELLNLKMLTHLDLTNNNLTEIPPLIGKMTQLRTLKLEGNPL 573
>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
Length = 612
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 126/226 (55%), Gaps = 21/226 (9%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL+ N KL+ P+ ++R L L + +N + LP T C L L + N
Sbjct: 231 LRNLHKLDLAKNDLKLLP---PVMGELRKLECLYVQHNDVGELPDFTGCDALKELHISNN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ D+ L +L +L+L++NKI ++ + L +L LDLS+N ++ +P LS+L
Sbjct: 288 FIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLA 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQ------EST 172
HL SL + GNPI+++R DI+Q ++RI+ +K + DG G SS+ E +
Sbjct: 348 HLVSLQVDGNPIRSIRRDIIQCGTQRILKTLK---------DRDGPGKSSEKVRVPFEES 398
Query: 173 SEINIDKYKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDK 218
+ ++ + K R+ ++ +I+IPE V++ M + I+I+ +K
Sbjct: 399 TFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDISKNK 444
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINN 63
L TLDLS N L S S + ++ LT LNL N LT LP C LT L LG NK++
Sbjct: 96 LTTLDLSSNTLTSISENVK-NLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKLSE 154
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +F L +L LNL +N +E+ +NV DLI L +LD+S N L +P + L L+
Sbjct: 155 LPESFF-NLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQ 213
Query: 124 LFLGGNPIKTVRNDIL 139
L L N + + NDI+
Sbjct: 214 LTLNNNRLTELPNDIV 229
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L L L NKL S+ F ++R L LNLS+N + +D L L + FN
Sbjct: 139 LTKLTKLSLGRNKL-SELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNS 197
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+N++ L +L L L NN+++E+ +++ +L NL LDL+ N+L +P + L
Sbjct: 198 LNSLPGGIGF-LVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLAKNDLKLLPPVMGELRK 256
Query: 121 LKSLFLGGNPI 131
L+ L++ N +
Sbjct: 257 LECLYVQHNDV 267
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 27/177 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV---------------- 44
M + + +D+S NKL+ L +TELN+S+N L +P+
Sbjct: 431 MEASVYNIDISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNN 490
Query: 45 -CTDCKNLTHLLLGFNKINNMENDY------FLTLTKLSLLNLKNNKISEVSSN---VGD 94
TD + LL+ ++N N L L +L + NKI E+ ++ +G
Sbjct: 491 QLTDLPEVVGLLVTLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGA 550
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
L LA LD+++N + VP L L ++ +L + GN + R+ IL+ ++ I+++++
Sbjct: 551 LPRLATLDVANNNIKQVPPILGMLKNITTLEIIGNAFRQPRHQILEKGTESIMAYLR 607
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E D + L+ L+L +N ++ +S NV +L +L +L+L DN LT +P + L L L
Sbjct: 86 EEDSWWNQKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKL 145
Query: 125 FLGGN 129
LG N
Sbjct: 146 SLGRN 150
>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
Length = 626
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 23/237 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ LDL+ N L P+ ++R L + +N + LP T C+ L L + N I
Sbjct: 229 LRKLQKLDLAKNDL-KKLPPVMGELRRLECFYVQHNDIDELPDFTGCEALKELHISNNYI 287
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D+ L +L +L+L++NKI ++ + L +L LDLS+N ++ +P LS+L HL
Sbjct: 288 KTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTISSLPSCLSTLAHL 347
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQES--------- 171
SL + GNPI+++R DI+Q ++RI +KT R DGG +
Sbjct: 348 VSLQVEGNPIRSIRRDIIQCGTQRI---LKTLRERDGTGKPDGGQKGVARAAASASTAVV 404
Query: 172 -----TSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKL 221
T D Y++ + + L +C +++IPE+V++ + + C ++I K KL
Sbjct: 405 KNSLFTESTFPDVYQMRKGRALIVCSKALVDIPEAVFLDALEA--CVYNVDISKNKL 459
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
L +LDLS N L +S+++ +D LT LNL N LT LP LT + NK+
Sbjct: 94 LTSLDLSSNTLTTISENIQNLVD---LTVLNLQDNALTSLPAGIGALTKLTKFSVARNKL 150
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +F L +L LNL +N+ +E++ N+ DLI L LD+S N + +P + L L
Sbjct: 151 TELPESFF-QLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRL 209
Query: 122 KSLFLGGNPIKTVRNDIL 139
+ L L N + + NDI+
Sbjct: 210 QQLTLSNNHLTELPNDIV 227
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 31/172 (18%)
Query: 8 LDLSHNKLVSDSLPLFIDMRS--LTELNLSYNQLTMLPV-----------------CTDC 48
+D+S NKL + +P I S LTELN+S+N L +P TD
Sbjct: 452 VDISKNKLTA--VPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDL 509
Query: 49 KNLTHLLLGFNKINNMEN------DYFLTLTKLSLLNLKNNKISEV---SSNVGDLINLA 99
+ LL+ ++N + N D L L +L N+I E+ S +G L LA
Sbjct: 510 PEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLA 569
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
LDL++N + VP L +L ++ +L L GN + R+ IL+ ++ I+S+++
Sbjct: 570 TLDLANNNIKHVPPVLGTLKNITTLELIGNSFRQPRHQILEKGTESIMSYLR 621
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L+ L ++ NKL LP F ++ L LNLS+N+ M P +D L L + FN
Sbjct: 137 LTKLTKFSVARNKLTE--LPESFFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
IN + L +L L L NN ++E+ +++ +L L LDL+ N+L +P + L
Sbjct: 195 SINALPGGVGF-LVRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELR 253
Query: 120 HLKSLFLGGNPI 131
L+ ++ N I
Sbjct: 254 RLECFYVQHNDI 265
>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
Length = 601
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 14/208 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +L+ LD S N++ S P+ M SL +L L +N+L LP CK L L G N+I
Sbjct: 217 MKNLRMLDCSRNQMESIP-PVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQI 275
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L LSLL L++NK+ + + L L LDL++N+++ +PC L +L L
Sbjct: 276 EVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKL 335
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQEST-------S 173
KSL L GNP++ +R D+L + + ++ ++++ Q GG+ + T +
Sbjct: 336 KSLSLEGNPLRAIRRDLLTKGTGELLKYLRS-----RVQEPPNGGLKEEPKTAMTFPSQA 390
Query: 174 EINIDKYKLDRTKTLTLCKVINIPESVY 201
+IN+ K +T + + IP+ V+
Sbjct: 391 KINVHAIKTLKTLDYSEKQDATIPDDVF 418
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
L L LS NKL + D + L + +L L++ NQL+ LP D + L L+L NK+
Sbjct: 82 LTKLLLSSNKLQSIPDDVKL---LPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKL 138
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + + LT L L+L+ N I ++ ++G L+NL LDLS+N L D+P L++L +L
Sbjct: 139 TELPSGVW-RLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNL 197
Query: 122 KSLFLGGNPIKTVRNDILQ 140
L L N +K++ I Q
Sbjct: 198 VKLDLSCNKLKSLPPAISQ 216
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 52/186 (27%)
Query: 5 LKTLDLS--HNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKN-LTHLLLGFNK 60
LKTLD S + + D + +D + +N S NQLT +P D K+ L + LGFNK
Sbjct: 400 LKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNK 459
Query: 61 INNMENDYFLTLTKLSLLNLKNN-------------KISEV------------------- 88
+ + D F L +L ++L+NN K+ V
Sbjct: 460 LTTIPAD-FCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPS 518
Query: 89 -------SSNVGD--------LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
S+ VG L L+ LDLS+N++ VP EL + L++L L GNP +
Sbjct: 519 LETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRN 578
Query: 134 VRNDIL 139
R IL
Sbjct: 579 PRAAIL 584
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L SLP I D+ L +L LS+N+LT LP NL L L
Sbjct: 101 LLPALVVLDIHDNQL--SSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQ 158
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I + D L L L+L NN + ++ ++ +L NL LDLS N+L +P +S +
Sbjct: 159 NLIEQIPRDLG-QLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQM 217
Query: 119 FHLKSLFLGGNPIKTV 134
+L+ L N ++++
Sbjct: 218 KNLRMLDCSRNQMESI 233
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +P NL ++ D + T L+ L L +NK+
Sbjct: 34 RKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQ 93
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ +V L L +LD+ DN+L+ +P + L L+ L L N
Sbjct: 94 SIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHN 136
>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
Length = 601
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 112/207 (54%), Gaps = 14/207 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +L+ LD S N++ S P+ M SL +L L +N+L LP CK L L G N+I
Sbjct: 217 MKNLRMLDCSRNQMESIP-PVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQI 275
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L LSLL L++NK+ + + L L LDL++N+++ +PC L +L L
Sbjct: 276 EVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKL 335
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQ-------ESTS 173
KSL L GNP++ +R D+L + + ++ ++++ Q GG+ + +S +
Sbjct: 336 KSLSLEGNPLRAIRRDLLTKGTGELLKYLRS-----RVQEPPNGGLKEEPKTAMTFQSQA 390
Query: 174 EINIDKYKLDRTKTLTLCKVINIPESV 200
+INI K +T + + +IP+ V
Sbjct: 391 KINIHAIKTLKTLDYSEKQDASIPDDV 417
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
L L LS NKL + D + L + +L L++ NQL+ LP D + L L+L NK+
Sbjct: 82 LTKLLLSSNKLQSIPDDVKL---LPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKL 138
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + + LT L L+L+ N I ++ ++G L+NL LDLS+N L D+P L++L +L
Sbjct: 139 TELPSGVW-RLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNL 197
Query: 122 KSLFLGGNPIKTVRNDILQ 140
L L N +K++ I Q
Sbjct: 198 VKLDLSCNKLKSLPPAISQ 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 52/186 (27%)
Query: 5 LKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKN-LTHLLLGFNK 60
LKTLD S + S D + +D + +N S NQLT +P D K+ L + LGFNK
Sbjct: 400 LKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNK 459
Query: 61 INNMENDYFLTLTKLSLLNLKNN-------------KISEV------------------- 88
+ + D F L +L ++L+NN K+ V
Sbjct: 460 LTTIPAD-FCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPS 518
Query: 89 -------SSNVGD--------LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
S+ VG L L+ LDLS+N++ VP EL + L++L L GNP +
Sbjct: 519 LETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRN 578
Query: 134 VRNDIL 139
R IL
Sbjct: 579 PRAAIL 584
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L SLP I D+ L +L LS+N+LT LP NL L L
Sbjct: 101 LLPALVVLDIHDNQL--SSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQ 158
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I + D L L L+L NN + ++ ++ +L NL LDLS N+L +P +S +
Sbjct: 159 NLIEQIPRDLG-QLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQM 217
Query: 119 FHLKSLFLGGNPIKTV 134
+L+ L N ++++
Sbjct: 218 KNLRMLDCSRNQMESI 233
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +P NL ++ D + T L+ L L +NK+
Sbjct: 34 RKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQ 93
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ +V L L +LD+ DN+L+ +P + L L+ L L N
Sbjct: 94 SIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHN 136
>gi|405971281|gb|EKC36127.1| Leucine-rich repeat-containing protein 40 [Crassostrea gigas]
Length = 606
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++ LK LD++HN+L LP + ++ +L +L L +NQL+ +P+ +CKNL + LG N+
Sbjct: 217 MNALKCLDVTHNQLTH--LPEDLGNLPNLEQLYLRHNQLSGIPLLKNCKNLKEIHLGNNQ 274
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L +++L++++NKISE+ + L L LDL++N+LT +P L ++
Sbjct: 275 IRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLTGLPFVLGTITS 334
Query: 121 LKSLFLGGNPIKTVRNDILQDS-----KRIISHIKTSR-LDYHCQNVDGGGMSSQESTSE 174
LKS+ L GNP+K++R DI+ K + S I+ + ++ + + GG + S
Sbjct: 335 LKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEPTNKGIQNGGDTGIVGGSG 394
Query: 175 INIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKY 219
+ + + ++K+L K +P+ ++ M + ++ ++ +++
Sbjct: 395 EGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQF 441
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L LD+ N+L +SLP I ++ +L +L++S N+L LP T +NL L + +N++
Sbjct: 105 LSVLDIHDNRL--ESLPQSIRELENLVKLDVSRNKLKELPESVTYLRNLRSLHVEYNELV 162
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ ++ L KL L+L NN++SE+ VG L ++ ++S+N L+ +P E+ S+ LK
Sbjct: 163 RV-SEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLSSLPPEIGSMNALK 221
Query: 123 SL 124
L
Sbjct: 222 CL 223
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 3 SHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
S LK + NKL ++ + LF+ LT L+L N L+ LP + +++ ++L N
Sbjct: 453 STLKEFNFGFNKLTKLNPDISLFL---RLTTLDLRNNGLSDLPRDMESLQDMREIVLSCN 509
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ + + + + KL ++ NNKI+ + ++ +L LA LDL +N + VP EL +
Sbjct: 510 RFTTLPSSLY-EMKKLEIIFADNNKITTIDAAGFKNLPMLATLDLQNNNIDQVPPELGNC 568
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
+KSL L GN + R IL
Sbjct: 569 TQIKSLLLNGNAFRNPRPAIL 589
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L++L + +N+LV S + + L +L+LS NQL+ LP +L H+L FN
Sbjct: 148 LRNLRSLHVEYNELVRVSEGIG-HLDKLEDLDLSNNQLSELP--PQVGHLYHVL-KFNVS 203
Query: 62 NNMENDY---FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NN + ++ L L++ +N+++ + ++G+L NL L L N+L+ +P L +
Sbjct: 204 NNRLSSLPPEIGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQLYLRHNQLSGIPL-LKNC 262
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+LK + LG N I+ + + LQ
Sbjct: 263 KNLKEIHLGNNQIRKITAEHLQ 284
>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
Length = 610
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ L+TLD +HN+L +LP + + L +L L +N+LT LP C L L LG N
Sbjct: 221 MQGLRTLDATHNQL--HTLPDDLGHLNKLEQLYLRHNRLTHLPSLQHCTALKELHLGNNA 278
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + + +S+L+L++N++++V S + L L LDL++N ++ +P EL +L +
Sbjct: 279 IQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISALPYELGTLPN 338
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEI----- 175
LKS+ L GNP+K++R DI+ + SR+ + S + TS I
Sbjct: 339 LKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSKGTSGIVGGAS 398
Query: 176 -NIDKYKLDRTKTLTLC--KVINIPESVYMRGMSS 207
+D + + +K L KV IP+ ++ S
Sbjct: 399 SGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSG 433
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 8 LDLSHNKLVSDSLPLFID-----MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
L+LS NKL + ID + L L+L NQL LP ++ +L L++ FN+
Sbjct: 462 LNLSFNKLTT------IDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRF 515
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + + +L L ++ +N+I+E+ + + L LA LDL +N++ VP EL +
Sbjct: 516 TSIPSVVY-SLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIRQVPPELGLVTQ 574
Query: 121 LKSLFLGGNPIKTVRNDIL 139
L+SL L GN I+ R IL
Sbjct: 575 LRSLQLEGNAIRQPRPAIL 593
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 24/131 (18%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
++S K LD S K+ + D L +T +N S NQLT P
Sbjct: 405 LVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQYP--------------- 449
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+I ++++ L LNL NK++ + +++G L L +LDL N+L +P ELS+
Sbjct: 450 KQIESLKDS-------LCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNA 502
Query: 119 FHLKSLFLGGN 129
L+ L + N
Sbjct: 503 SSLRELVISFN 513
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +P N+ N ++ + LS L L +N ++
Sbjct: 38 RKSGQLNLSGRSLTEVPQSVWKINIDVPKESSNISLGTTDERWWEQVDLSKLILASNALT 97
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRII 146
+S ++ L L +LD+ DN+L +P L L +L+ L L N +K + I Q +
Sbjct: 98 SLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESICQLPRLQF 157
Query: 147 SHIKTSRLDYHCQNV 161
+I+ ++L+ +++
Sbjct: 158 LYIQNNQLEALPEDI 172
>gi|270015218|gb|EFA11666.1| hypothetical protein TcasGA2_TC008530 [Tribolium castaneum]
Length = 621
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 115/203 (56%), Gaps = 7/203 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L LD++HN LV LP ++ L L +N + +P C +L + G N I
Sbjct: 225 LRGLLKLDVTHNDLVY--LPKMGELAKLQFLYAQHNNIEEIPDFEGCTHLQQVYFGNNYI 282
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D+ ++ L +L+L++NKI ++ + + L +L LDL++N+LTD+P L L HL
Sbjct: 283 KEVTTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHL 342
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
++L L GN +K +R DI++ + RI+ H+K D ++V +S+ + ++ DKY
Sbjct: 343 QNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESV--PKVSTMQHEAKTFPDKY 400
Query: 181 KLDRTKTL--TLCKVINIPESVY 201
+ +++L T+ ++ ++P+ V+
Sbjct: 401 TIKHSRSLNVTMKQLTSVPDDVF 423
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
L LDLS N V +P I M LT LNL N +T LP +C K LT L L NKI
Sbjct: 90 LNYLDLSSN--VLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTK-LTKLNLSHNKI 146
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N + +++ L +L +L+L +N + ++S N DL+ L LDLS N LT +P + L L
Sbjct: 147 NLLPMEFY-KLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRL 205
Query: 122 KSLFLGGNPIKTVRNDIL 139
+ L N + + DI+
Sbjct: 206 TEINLSHNKLIELPPDIV 223
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ + +DL NKL S + + +LTELNLS N ++ +P ++C L + LG N
Sbjct: 428 LAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNL 487
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE-LSSLF 119
++++ + +L L L L NN+ + V ++ L IL SDN++TD+ E L +L
Sbjct: 488 LSDLP-ECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLT 546
Query: 120 HLKSLFLGGNPIKTVR---NDILQDS-KRIISHIKTSRLDYHCQNVDGGGMSSQESTSEI 175
+ +L L N + + ++ Q S K IIS S L C V GM+ S++
Sbjct: 547 RIATLDLTNNNMSHIPPELGNVTQLSWKSIIS--ADSDLISDCSTVTLAGMAPLSSSNSG 604
Query: 176 NIDKYKLDRTKTL 188
N + R + L
Sbjct: 605 NSRQNMCQRNRIL 617
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 32 LNLSYNQLTMLP--VCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LN++ QLT +P V + K +T + L NK+ ++ N L L+ LNL N ISE
Sbjct: 408 LNVTMKQLTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISE 467
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ + + I L DL +N L+D+P LSSL L+ L L N
Sbjct: 468 IPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNN 509
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 45/157 (28%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ L L+HN L S F D+ L +L+LS+N LT LP +GF
Sbjct: 156 LVELQVLSLAHNNLEKIS-KNFADLVMLQQLDLSHNILTKLPPG----------MGF--- 201
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP--CELSSL- 118
L +L+ +NL +NK+ E+ ++ +L L LD++ N+L +P EL+ L
Sbjct: 202 ----------LVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQ 251
Query: 119 ------------------FHLKSLFLGGNPIKTVRND 137
HL+ ++ G N IK V D
Sbjct: 252 FLYAQHNNIEEIPDFEGCTHLQQVYFGNNYIKEVTTD 288
>gi|326428302|gb|EGD73872.1| leucine rich repeat containing protein 40 [Salpingoeca sp. ATCC
50818]
Length = 535
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
LS + L++ HN L + +PL ++ M SLT L+L YN+LT LP + K L L LGFN
Sbjct: 201 LSLITELEIIHNSLTA--VPLSLENMASLTRLDLRYNKLTALPRLCNLKALRELSLGFNS 258
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + + L +L++++NK+ ++S ++ L L LD+++N+L +P EL L
Sbjct: 259 ITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLATLPPELGVLPK 318
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTS-EINID 178
LKS+ L GNP++++R DI+ + ++ I+ ++++ + + G + S+ S + +
Sbjct: 319 LKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAELTSGSVQSEASAQRQEAVA 378
Query: 179 KYKLDRTKTLTLCK 192
K ++ + TL L +
Sbjct: 379 KAEMKASATLDLSE 392
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
+ +L L++ N+I + +D L L L+LL+ NN++ VS +G L L L+ + N
Sbjct: 62 ESTDLQRLIVASNEIREIPDDVEL-LGALTLLDAHNNQLERVSDKLGALQELKALNFAHN 120
Query: 107 ELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+L +P + +L HLKSL L GN I+ V
Sbjct: 121 KLRAIPDGVYALRHLKSLRLTGNQIQDV 148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 56/127 (44%), Gaps = 28/127 (22%)
Query: 7 TLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC--KNLTHLLLGFNKIN 62
TLDLS KL V +++L L N L LP TDC LT L LGFNKI+
Sbjct: 387 TLDLSEQKLQLVPSKQLEAAQGAGISKLVLRKNLLQNLPAGTDCLASTLTELDLGFNKID 446
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ S ++ L NL +LDL N+LT +P EL SL L+
Sbjct: 447 TL------------------------SPSIALLGNLTVLDLQGNQLTSLPSELISLASLR 482
Query: 123 SLFLGGN 129
L L N
Sbjct: 483 DLILSFN 489
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
+L L LD +N+L VSD L ++++L N ++N+L +P
Sbjct: 85 LLGALTLLDAHNNQLERVSDKLGALQELKAL---NFAHNKLRAIP--------------- 126
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
D L L L L N+I +V +G L +L LDL++N+L +P L L
Sbjct: 127 --------DGVYALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRL 178
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L N ++T+ I Q
Sbjct: 179 AQLRRLALNKNNLQTLPQSIAQ 200
>gi|427794931|gb|JAA62917.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
Length = 601
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++ L+ LD+S N+L SLP I + L +L N+LT LP T C L L +G N
Sbjct: 213 MNALQILDVSSNRL--RSLPESIGSLCHLEQLFAQQNELTALPPFTSCGRLMELHVGNNA 270
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + TL L L+LK+NK+S +S ++ + L LDLS+N L +P EL +L H
Sbjct: 271 MEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYELGTLVH 330
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN---- 176
LK L + GNP++ +R DI+ KR H+ D ++ +G + +N
Sbjct: 331 LKGLGVEGNPLRAIRRDIV---KRGTVHLLKWLQDRLGESPEGAARKRLSGGAALNDGSD 387
Query: 177 ----IDKYKLDRTKTLTLCK--VINIPESVYMRGMSSQECTIEIN 215
I+K+ L T L L K + ++PE ++ TI+++
Sbjct: 388 LIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLS 432
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 26/158 (16%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCK--------------- 49
T+DLS N L S L +TELNLS+N+LT LP +C +
Sbjct: 428 TIDLSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLP 487
Query: 50 -------NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAIL 101
N+ + L FN+ + + + + L +L +NKI E+ ++ + L ++A+L
Sbjct: 488 GEMSVLSNVREVSLSFNRFSRIP-EVVTSWQSLEILFASDNKIEELDTTQLQKLKHIAVL 546
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL +N + VP EL ++ L+SL L GNP + R IL
Sbjct: 547 DLRNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAIL 584
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLL--- 56
L HL L++S NKL + DS F ++ L +L +N + L D NL+ L L
Sbjct: 121 LHHLTKLNISRNKLQRLPDS---FYQLKELRQLLAHHNDIAEL--SDDIGNLSLLELVDL 175
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NK++++ L++ + +NL +N ++E+ +G + L ILD+S N L +P +
Sbjct: 176 SHNKLSSLPA-MIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRSLPESIG 234
Query: 117 SLFHLKSLFLGGN 129
SL HL+ LF N
Sbjct: 235 SLCHLEQLFAQQN 247
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L L+ N LT LP + +LT L + NK+ + D F L +L L +N I+E+S
Sbjct: 104 LELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLP-DSFYQLKELRQLLAHHNDIAELSD 162
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++G+L L ++DLS N+L+ +P + L ++ L N + + +I
Sbjct: 163 DIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEI 210
>gi|427794929|gb|JAA62916.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
Length = 601
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++ L+ LD+S N+L SLP I + L +L N+LT LP T C L L +G N
Sbjct: 213 MNALQILDVSSNRL--RSLPESIGSLCHLEQLFAQQNELTALPPFTSCGRLMELHVGNNA 270
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + TL L L+LK+NK+S +S ++ + L LDLS+N L +P EL +L H
Sbjct: 271 MEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYELGTLVH 330
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN---- 176
LK L + GNP++ +R DI+ KR H+ D ++ +G + +N
Sbjct: 331 LKGLGVEGNPLRAIRRDIV---KRGTVHLLKWLQDRLGESPEGAARKRLSGGAGLNDGSD 387
Query: 177 ----IDKYKLDRTKTLTLCK--VINIPESVYMRGMSSQECTIEIN 215
I+K+ L T L L K + ++PE ++ TI+++
Sbjct: 388 LIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLS 432
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 26/158 (16%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCK--------------- 49
T+DLS N L S L +TELNLS+N+LT LP +C +
Sbjct: 428 TIDLSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLP 487
Query: 50 -------NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAIL 101
N+ + L FN+ + + + + L +L +NKI E+ ++ + L ++A+L
Sbjct: 488 GEMSVLSNVREVSLSFNRFSRIP-EVVTSWQSLEILFASDNKIEELDTTQLQKLKHIAVL 546
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL +N + VP EL ++ L+SL L GNP + R IL
Sbjct: 547 DLRNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAIL 584
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLL--- 56
L HL L++S NKL + DS F ++ L +L +N + L D NL+ L L
Sbjct: 121 LHHLTKLNISRNKLQRLPDS---FYQLKELRQLLAHHNDIAEL--SDDIGNLSLLELVDL 175
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NK++++ L++ + +NL +N ++E+ +G + L ILD+S N L +P +
Sbjct: 176 SHNKLSSLPA-MIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRSLPESIG 234
Query: 117 SLFHLKSLFLGGN 129
SL HL+ LF N
Sbjct: 235 SLCHLEQLFAQQN 247
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L L+ N LT LP + +LT L + NK+ + D F L +L L +N I+E+S
Sbjct: 104 LELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLP-DSFYQLKELRQLLAHHNDIAELSD 162
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++G+L L ++DLS N+L+ +P + L ++ L N + + +I
Sbjct: 163 DIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEI 210
>gi|189241927|ref|XP_968016.2| PREDICTED: similar to mitotic protein phosphatase 1 regulator,
putative [Tribolium castaneum]
Length = 594
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L LD++HN LV LP ++ L L +N + +P C +L + G N I
Sbjct: 213 LRGLLKLDVTHNDLVY--LPKMGELAKLQFLYAQHNNIEEIPDFEGCTHLQQVYFGNNYI 270
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D+ ++ L +L+L++NKI ++ + + L +L LDL++N+LTD+P L L HL
Sbjct: 271 KVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHL 330
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
++L L GN +K +R DI++ + RI+ H+K D ++V +S+ + ++ DKY
Sbjct: 331 QNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESVP--KVSTMQHEAKTFPDKY 388
Query: 181 KLDRTKTL--TLCKVINIPESVYMRGMSSQECTIEI 214
+ +++L T+ ++ ++P+ V+ ++ +++
Sbjct: 389 TIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDL 424
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
L LDLS N V +P I M LT LNL N +T LP +C K LT L L NKI
Sbjct: 78 LNYLDLSSN--VLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTK-LTKLNLSHNKI 134
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N + +++ L +L +L+L +N + ++S N DL+ L LDLS N LT +P + L L
Sbjct: 135 NLLPMEFY-KLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRL 193
Query: 122 KSLFLGGNPIKTVRNDIL 139
+ L N + + DI+
Sbjct: 194 TEINLSHNKLIELPPDIV 211
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 27/175 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ + +DL NKL S + + +LTELNLS N ++ +P ++C L + LG N
Sbjct: 416 LAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNL 475
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTD---------- 110
++++ + +L L L L NN+ + V ++ L IL SDN++TD
Sbjct: 476 LSDLP-ECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLT 534
Query: 111 --------------VPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+P EL ++ L++L L GN + R IL Q + ++S+++
Sbjct: 535 RIATLDLTNNNMSHIPPELGNVTQLRTLELRGNCFRQPRYAILEQGTASVLSYLR 589
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 32 LNLSYNQLTMLP--VCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LN++ QLT +P V + K +T + L NK+ ++ N L L+ LNL N ISE
Sbjct: 396 LNVTMKQLTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISE 455
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ + + I L DL +N L+D+P LSSL L+ L L N
Sbjct: 456 IPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNN 497
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 45/157 (28%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ L L+HN L S F D+ L +L+LS+N LT LP +GF
Sbjct: 144 LVELQVLSLAHNNLEKIS-KNFADLVMLQQLDLSHNILTKLPPG----------MGF--- 189
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP--CELSSL- 118
L +L+ +NL +NK+ E+ ++ +L L LD++ N+L +P EL+ L
Sbjct: 190 ----------LVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQ 239
Query: 119 ------------------FHLKSLFLGGNPIKTVRND 137
HL+ ++ G N IK + D
Sbjct: 240 FLYAQHNNIEEIPDFEGCTHLQQVYFGNNYIKVITTD 276
>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
Length = 608
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 119/225 (52%), Gaps = 18/225 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L +DL+ N L P+ ++R L L + +N + LP T C L + + N I
Sbjct: 226 LRNLHKMDLAKNDL-KQLPPVMGELRKLECLYVQHNDVVELPDFTGCDALKEIHISNNFI 284
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ D+ L +L +L+L++NKI ++ + L +L LDLS+N ++ +P LS+L HL
Sbjct: 285 KSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHL 344
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQEST-----SEI 175
SL + GNPI+++R DI+Q ++RI+ ++ DG G E+
Sbjct: 345 VSLQVEGNPIRSIRRDIIQCGTQRILKTLRER---------DGPGKGGPENVKAPFEEST 395
Query: 176 NIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDK 218
D Y++ + +++ + +I++PE V++ + ++I+ +K
Sbjct: 396 FPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNK 440
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
L LDLS N L +S+++ ++ LT LNL N LT LP C LT + + NK+
Sbjct: 91 LTNLDLSSNALTCISENVK---NLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKL 147
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +F L +L +LNL +N SE+ SNV DLI L +LD+S N L +P + L L
Sbjct: 148 TELPESFF-ELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRL 206
Query: 122 KSLFLGGNPIKTVRNDIL 139
+ L L N + + NDI+
Sbjct: 207 QQLTLNNNRLIELPNDIV 224
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L +++S NKL LP F +++ L LNL++N + + +D L L + FN
Sbjct: 134 LTKLTKINISRNKLTE--LPESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+N++ L +L L L NN++ E+ +++ +L NL +DL+ N+L +P + L
Sbjct: 192 SLNSLPGGIGF-LVRLQQLTLNNNRLIELPNDIVNLRNLHKMDLAKNDLKQLPPVMGELR 250
Query: 120 HLKSLFLGGNPI 131
L+ L++ N +
Sbjct: 251 KLECLYVQHNDV 262
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 8 LDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPV-----------------CTDC 48
+D+S NKL V + D LTELN+S+N L +P+ D
Sbjct: 434 VDISKNKLGEVPSGITHLAD--QLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADL 491
Query: 49 KNLTHLLLGFNKINNMENDY------FLTLTKLSLLNLKNNKISEV---SSNVGDLINLA 99
+ LL+ ++N N L L +L ++NKI E+ S + L LA
Sbjct: 492 PEVVGLLVTLRELNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESGLAALPRLA 551
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
LDL++N + VP L L ++ +L L GN + R+ IL+ ++ I+++++
Sbjct: 552 TLDLANNNIKQVPPVLGLLKNITTLELIGNGFRQPRHQILEKGTESIMAYLR 603
>gi|156404169|ref|XP_001640280.1| predicted protein [Nematostella vectensis]
gi|156227413|gb|EDO48217.1| predicted protein [Nematostella vectensis]
Length = 602
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 4 HLKTLD---LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
HL+ LD +S NK+ + L+ +M+SL L+ N LT +P C +L L L +NK
Sbjct: 212 HLQALDDLNISSNKICNFPGKLY-NMKSLRRLDCRQNHLTSVPSVGQCPSLKELYLAYNK 270
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I +++ F + L++L+L +N ++ + ++ L +L LDL++N+++ +P ++ ++ +
Sbjct: 271 IAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSN 330
Query: 121 LKSLFLGGNPIKTVRNDI-LQDSKRIISHIK---------TSRLDYHCQNVDGGGMSSQE 170
LKSL L GNP++ +R DI ++ ++ I+ H+K T + D + M S
Sbjct: 331 LKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAPLPSVSMGSSG 390
Query: 171 STSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEIN 215
+ +D + L TKTL K +IP V ++S+ T++ +
Sbjct: 391 AV----VDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFS 433
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 27/140 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+ L+ LDL +N+L SLP F +RSL E+ +SYN+ + LP V +L LL N
Sbjct: 471 FTQLEFLDLRNNQL--SSLPDGFASLRSLREIIISYNRFSCLPPVLYSMTSLRTLLACDN 528
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++ D L ++ L L+L+NN IS+V P EL ++
Sbjct: 529 QIAVIDVDGLLRMSVLETLDLQNNNISQV-----------------------PPELGNVR 565
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LK+L LGGNP +T R IL
Sbjct: 566 GLKALQLGGNPFRTPRAAIL 585
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D + L+ L L +N ++E+S +V +L L +LD+ DN LT +P E+ SL L+ L L
Sbjct: 71 DRWWDQVDLTKLILASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNL 130
Query: 127 GGNPIKTVRNDILQ 140
G N I ++ + Q
Sbjct: 131 GHNKISSLPMSMAQ 144
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
LS L+ L+L HNK+ SLP+ + SL L L +N L +NL L + +N
Sbjct: 122 LSCLQKLNLGHNKI--SSLPMSMAQLESLCSLKLEHNSFKSLECWLGSLRNLEELDVSYN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++++ + L L LNL NN + + L L L++S N++ + P +L ++
Sbjct: 180 MVSSLPS--LAGLKHLRTLNLSNNALEMLPPEFDHLQALDDLNISSNKICNFPGKLYNMK 237
Query: 120 HLKSL 124
L+ L
Sbjct: 238 SLRRL 242
>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
tropicalis]
gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
Length = 605
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ +LK LD + N L +++P + M SL +L L N+LT LP L L +G N+
Sbjct: 219 MKNLKQLDCTSNLL--ENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQ 276
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L+ LS+L L+ NK+ + + L L LDLS+N+L +PC L SL +
Sbjct: 277 IQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPN 336
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIK--TSRLDYHCQNVDGGGMSSQESTSEINI 177
LKSL L GNP++ +R DIL + ++ ++ ++K D Q + ++ SE +
Sbjct: 337 LKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTATAMTLPSESVV 396
Query: 178 DKYKLDRTKTLTLC--KVINIPESVY 201
+ + + KTL C + IPE+V+
Sbjct: 397 NTHAIVTLKTLEYCEKQASLIPEAVF 422
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N++VS LP I ++ +L +LN+S+N++ LP +NL LLL
Sbjct: 103 LLPALVVLDIHDNQIVS--LPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKSLLLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L+ L L++ NN + +SS+VG L L +LS N+LT +P E+ +
Sbjct: 161 NQLEELP-DSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKM 219
Query: 119 FHLKSL 124
+LK L
Sbjct: 220 KNLKQL 225
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +PV N+ ++ +D + T L+ L L +NK+
Sbjct: 36 RKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKR 144
+S ++ L L +LD+ DN++ +PC + L +L+ L + N IK + ++ LQ+ K
Sbjct: 96 LLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQNLKS 155
Query: 145 II 146
++
Sbjct: 156 LL 157
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN 66
++L NK+ S SL L + ++ LT +++ N LT LP + L ++L FN+ +
Sbjct: 457 VNLGFNKISSISLNLCMLLK-LTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKHFP- 514
Query: 67 DYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D + L + + +N+I + + + + L+ LDL +N+L +P L + L++L
Sbjct: 515 DVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCESLRALH 574
Query: 126 LGGNPIKTVRNDIL 139
L GNP + R IL
Sbjct: 575 LEGNPFRNPRAAIL 588
>gi|350425451|ref|XP_003494125.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Bombus
impatiens]
Length = 602
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 32/285 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L +LDLSHN ++ + P +MR+L +LN SYNQL MLP + + + ++L NK+
Sbjct: 199 LVRLTSLDLSHN-MLKELPPDLTNMRALQKLNASYNQLEMLPPLGELRKVETVMLQSNKL 257
Query: 62 NNMEN-------------DYFLT---------LTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ D +T + +L L L NN+I + + L+ L
Sbjct: 258 TTFPDISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLE 317
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHC 158
I DLS N+LT +P + L +LK + GN I+ VR DI++ + RI+ HI R
Sbjct: 318 IFDLSHNKLTLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHI---RQGIKS 374
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINI 216
N+D ++++ I D+Y + TK L+L + +P+ V + T++++
Sbjct: 375 TNLDVKEHVVADTSTNIYPDRYTMQSTKLLSLAGQNLTELPQEVLENACKADVGTVDLSR 434
Query: 217 DKYKLDRTKTLTLCKVINIPESVYMNRPFALTYNYVGDFFHFCLI 261
+K + K LC + I + + ++G+ + + I
Sbjct: 435 NKLSILPDK---LCIIERIADLKLTSNQLTHIPEWIGEKYKYLQI 476
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L+TLDLS N L P ++ LT L L N+L LP + K L L L NK+
Sbjct: 87 LQTLDLSCNTLKKID-PQIENLTELTTLYLHNNRLEDLPAEIGNLKKLNILNLSNNKLEK 145
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++++ L +L LNLKNN I E+ VGD + L LDLS N L ++P + L L S
Sbjct: 146 FPHEFY-KLNELRELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTS 204
Query: 124 LFLGGNPIKTVRNDI 138
L L N +K + D+
Sbjct: 205 LDLSHNMLKELPPDL 219
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF-NKI 61
+L+ LDLS N L SLP+ + + + L ELN+S+N+ +P N +L+ N I
Sbjct: 473 YLQILDLSRNLL--QSLPINLGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNLI 530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
+++ F L KL++LNL NN I V +G L NL L LS N
Sbjct: 531 TDIDVPSFQKLQKLAILNLANNNIGFVPPELGTLKNLRNLSLSGN 575
>gi|194743396|ref|XP_001954186.1| GF18150 [Drosophila ananassae]
gi|190627223|gb|EDV42747.1| GF18150 [Drosophila ananassae]
Length = 782
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 52/244 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L L HN ++ LP F SL EL+ S N + +P C NL HL
Sbjct: 406 LLRKLECLYLQHNDILE--LPDFEGNESLNELHASNNFIKTIPKSM-CSNLPHL------ 456
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 457 ---------------KILDLRDNKITELPDELCLLRNLTRLDVSNNSISVLPVTLSSLAH 501
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + N + GG + ++ I++ +
Sbjct: 502 LISLQVDGNPIKTIRRDILQCGTTRILKTLHERAM----ANKEEGGSDAASTSGGISVTR 557
Query: 180 YKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLT--LCKVINIPE 237
+ T T +IPE+ D+YKL T+TL L ++ +PE
Sbjct: 558 LRGGHTDT------GDIPENF---------------PDRYKLRHTRTLAVNLEQLTEVPE 596
Query: 238 SVYM 241
V+
Sbjct: 597 QVFQ 600
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP I + L LN+SYN+ L P +D L L G N
Sbjct: 292 LEKLMRLNVSHNKL--SHLPREIYSLPDLRHLNISYNEFKELDPDISDLHMLEFLDGGHN 349
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L ++L N+L +P ++ L
Sbjct: 350 NIQSLPGGIGF-LVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDDMGLLR 408
Query: 120 HLKSLFLGGNPI 131
L+ L+L N I
Sbjct: 409 KLECLYLQHNDI 420
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L L L N LV + P + L LN+S+N+L+ LP +L HL + +N+
Sbjct: 269 LASLTVLTLHDNALV-ELPPEIGKLEKLMRLNVSHNKLSHLPREIYSLPDLRHLNISYNE 327
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ D L L L+ +N I + +G L+ L L L N + ++P +L ++
Sbjct: 328 FKELDPD-ISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRS 386
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ + L N + + +D+
Sbjct: 387 LQKIELEQNDLIGLPDDM 404
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ E D + L+ L+L +N ++ +SS + +L +L +L L DN L ++P E+ L
Sbjct: 234 KLTMKEEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLE 293
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L + N + + +I
Sbjct: 294 KLMRLNVSHNKLSHLPREI 312
>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
Length = 570
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LD+ HN+L S LP + + +T L++ YN L LP L LL+G+N+
Sbjct: 194 LEALQELDIVHNRLTS--LPTKLGSLSHITRLDVRYNALQRLPSLASMTQLKELLVGYNQ 251
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ + + L L LL++++NKI+++ + + L L L+LS+N+++ +P EL +
Sbjct: 252 IHTLGDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDISSLPPELGLVRS 311
Query: 121 LKSLFLGGNPIKTVRNDILQDSK-RIISHIKTSRL 154
+K++ L GNP++++R DI++ I+ H++ SRL
Sbjct: 312 IKAISLDGNPLRSLRRDIVRRGTLAILEHLR-SRL 345
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD--CKNLTHLLLGFN 59
L+ L+LS+ L D +P I ++ + L N+L LP D LTHL LGFN
Sbjct: 371 LAQTGALNLSNQGL--DHVPSDIFQEAVEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFN 428
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L +L L L+ N ++ + + L L L L N T +P + L
Sbjct: 429 RLSTLSSAIGL-LPRLVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALPDVVRHLR 487
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L++L L N + TV D+L
Sbjct: 488 ALQNLMLNDNQVSTVDPDVL 507
>gi|301112348|ref|XP_002905253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095583|gb|EEY53635.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 702
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMR-----SLTELNLSYNQLTMLPV-CTDCKNLTHLL 55
L HL+ L L N L ++S+ F+ SL EL++ N L LPV + ++L LL
Sbjct: 456 LPHLELLRLRKNSLSAESISEFLGNSPALGDSLKELDVRNNSLATLPVEISQLRSLETLL 515
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
LGFN++ ++ + LTK+S++++ +NK+ + + D LA L +N LT VPCEL
Sbjct: 516 LGFNRLETLDRFPWSQLTKVSVVSVSDNKLRALG-RIYDAPLLASLSFENNSLTKVPCEL 574
Query: 116 SSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
HL+++++ GNP +TVR ++ + S I++++K
Sbjct: 575 GLCPHLRAIYMNGNPQRTVRGGVIAKGSAEILAYLK 610
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 81/141 (57%), Gaps = 6/141 (4%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +++ LDL N+L S D+L ++ L +L N+L + P + +L + LG+N
Sbjct: 206 LRNMQNLDLKKNRLESTGDALATLTKLKFL---DLRQNKLAVFPALPEGADLDQVFLGYN 262
Query: 60 KINNMENDYFLTLT-KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ + L + +++L++++NK++ + +N+ L L LD+++N+L+D+P L L
Sbjct: 263 TLSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYL 322
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
HL + GNP++ +R ++
Sbjct: 323 KHLNHFIVDGNPLRAIRRAVI 343
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L LDLSHN+L + F + L EL LS N+L+ LP T +NL L + NK
Sbjct: 113 LHALTYLDLSHNELEQNLSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENK 172
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L KL +LN +N ++ + S+ G L N+ LDL N L L++L
Sbjct: 173 LTALP-ERIGNLHKLHVLNAHSNHLTALPSSFGALRNMQNLDLKKNRLESTGDALATLTK 231
Query: 121 LKSLFLGGN 129
LK L L N
Sbjct: 232 LKFLDLRQN 240
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 8 LDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNM 64
+DLSHN + +SD + + S+T + L+ N L +LP + LT+L L N++
Sbjct: 73 MDLSHNAIPSISDEIG---GLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELEQN 129
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
++ F L L L L NK+S + +++ L NL L + +N+LT +P + +L L L
Sbjct: 130 LSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHVL 189
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 28 SLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L LNLS NQL LP + +L L + N++ ++ L L LL L+ N +S
Sbjct: 412 TLFHLNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALD-PSIAALPHLELLRLRKNSLS 470
Query: 87 EV--------SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
S +GD +L LD+ +N L +P E+S L L++L LG N ++T+
Sbjct: 471 AESISEFLGNSPALGD--SLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETL 524
>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
Length = 605
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 28/252 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ +L+ LD + N L +++P + M SL +L L N+LT LP L L +G N+
Sbjct: 219 MKNLRQLDCTSNLL--ENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQ 276
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L+ LS+L L+ NK+ + + L L LDLS+N++ +P L SL +
Sbjct: 277 IQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPN 336
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQEST-------- 172
LKSL L GNP++ +R DIL + + L Y V M++QE+
Sbjct: 337 LKSLQLDGNPLRGIRRDILNKGTQEL-------LKYLKGRVQTPDMTTQEAANPPDTAMT 389
Query: 173 --SEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLT 228
S+ I+ + + KTL C + IPE+V+ SS T +N K +L T
Sbjct: 390 LPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITT--VNFSKNQL----TEV 443
Query: 229 LCKVINIPESVY 240
+++ + +SVY
Sbjct: 444 PARIVEMKDSVY 455
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+L L LD+ N++ S LP I ++ +L +LN+S+N++ LP +NL LL
Sbjct: 103 LLPALVVLDIHDNQIAS--LPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L+ L L++ NN + VSS+VG L L +LS N+LT +P E+ +
Sbjct: 161 NQLEELP-DSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKM 219
Query: 119 FHLKSL 124
+L+ L
Sbjct: 220 KNLRQL 225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +PV N+ ++ +D + T L+ L L +NK+
Sbjct: 36 RKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN++ +PC + L +L+ L + N IK + N++
Sbjct: 96 ALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNEL 147
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN 66
++L NK+ S SL L + ++ LT L++ N L LP + L ++L FN+ +
Sbjct: 457 VNLGFNKISSISLNLCMLLK-LTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKHFP- 514
Query: 67 DYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D T+ L + + +N+I + + + L+ LDL +N+L +P L + L++L
Sbjct: 515 DVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALH 574
Query: 126 LGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L GNP + R IL I SR+
Sbjct: 575 LEGNPFRNPRATILAKGTVAILEYLRSRI 603
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
+T +N S NQLT +P +I M++ + +NL NKIS +
Sbjct: 430 ITTVNFSKNQLTEVPA---------------RIVEMKDSVYD-------VNLGFNKISSI 467
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
S N+ L+ L LD+ +N L +P E+ +L L+S+ L N K
Sbjct: 468 SLNLCMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFK 511
>gi|195061568|ref|XP_001996020.1| GH14049 [Drosophila grimshawi]
gi|193891812|gb|EDV90678.1| GH14049 [Drosophila grimshawi]
Length = 744
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 112/221 (50%), Gaps = 24/221 (10%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ LDL N L++ LP + MR L L + +N + LP + L+ L N I +
Sbjct: 351 LQKLDLMKNDLIA--LPEDMGLMRKLECLYVQHNDIKELPTFEGNEMLSELHASNNFIES 408
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ D L L + +L++NKI+++ + + NL LDL++N ++ +P LSSL HL S
Sbjct: 409 VPQDLCANLPHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSLAHLIS 468
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGM---------SSQESTS 173
L + GNPIKT+R DILQ + RI +KT + + GG SS S
Sbjct: 469 LQVDGNPIKTIRRDILQCGTARI---LKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQG 525
Query: 174 EIN------IDKYKLDRTKTLT--LCKVINIPESVYMRGMS 206
+N D+YKL T+TL L + N+PE V+ S
Sbjct: 526 AMNNLPNNMTDRYKLRHTRTLAVNLENLTNVPEHVFQLASS 566
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQ-LTMLPVCTDCKNLTHLLLGFN 59
L L L+LSHNKL LP F + L LN+S+N+ L + P ++ L L G N
Sbjct: 256 LEKLVRLNLSHNKL--SELPAEFYSLPELRHLNISHNEFLELNPDISNLHMLEFLDAGNN 313
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
IN + L +L+ L L NN I E+ +++ ++ +L LDL N+L +P ++ +
Sbjct: 314 NINTVPGGIGF-LVRLTALLLANNHIKELPTDIVNMRSLQKLDLMKNDLIALPEDMGLMR 372
Query: 120 HLKSLFLGGNPIKTV 134
L+ L++ N IK +
Sbjct: 373 KLECLYVQHNDIKEL 387
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L L L N LVS LP I + L LNLS+N+L+ LP
Sbjct: 236 LTVLQLHDNALVS--LPPEIGKLEKLVRLNLSHNKLSELPA------------------- 274
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
F +L +L LN+ +N+ E++ ++ +L L LD +N + VP + L L +
Sbjct: 275 ----EFYSLPELRHLNISHNEFLELNPDISNLHMLEFLDAGNNNINTVPGGIGFLVRLTA 330
Query: 124 LFLGGNPIKTVRNDIL 139
L L N IK + DI+
Sbjct: 331 LLLANNHIKELPTDIV 346
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 31/171 (18%)
Query: 8 LDLSHNKLVSDSLPLFIDMRS--LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
+D + N+L SLP + + S +TEL L++N + +P T +T L L N+I ++
Sbjct: 572 VDFARNQL--GSLPQGLQLMSNLVTELVLAHNVIASVPTFITQFTRITFLNLSNNQIRDL 629
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL----------------------- 101
N+ F L L LN+ NN+ + + +L L IL
Sbjct: 630 PNE-FGVLNTLRELNIANNRFEFLPKGLYELQGLEILIASENHIKALNVDGLKGMPRLST 688
Query: 102 -DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
DL +N++ +P L +L ++ L L GNP + R+ IL + + I+S+++
Sbjct: 689 LDLRNNDIEFIPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLR 739
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 32 LNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS N LT + P + LT L L N + ++ + L KL LNL +NK+SE+ +
Sbjct: 216 LDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEIG-KLEKLVRLNLSHNKLSELPA 274
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L++S NE ++ ++S+L L+ L G N I TV I
Sbjct: 275 EFYSLPELRHLNISHNEFLELNPDISNLHMLEFLDAGNNNINTVPGGI 322
>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
carolinensis]
Length = 605
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L+ LD + N L + P +M SL +L L N+L LP C L L +G N+I
Sbjct: 220 MKSLRQLDCTKNYLETIP-PELANMASLEQLYLRRNKLRYLPDLPSCTVLKELHVGENQI 278
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ ++ L L +L+L+ NK+ V + L + LDLS+N+++ +PC+L +L L
Sbjct: 279 EMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISSLPCKLGNLSQL 338
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGG-GMSSQESTSEINIDK 179
K L L GNP++T+R DILQ ++ I+ +++ D + +G +++ S+++++
Sbjct: 339 KFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTAMTLPSQLDVNL 398
Query: 180 YKLDRTKTL 188
+ L KTL
Sbjct: 399 HALTALKTL 407
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LPL I + +L +LN+S+N+LT LP K+L LLL
Sbjct: 104 LLPALTVLDIHDNQLTS--LPLAIGSLENLQKLNVSHNKLTDLPEELLQLKHLRSLLLQH 161
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ D F L L L++ NN +S + ++ L NL L+LS N+L +P E+S++
Sbjct: 162 NELSHLP-DEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLKFLPAEISAM 220
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
L+ L N ++T+ ++ + +++ ++L Y
Sbjct: 221 KSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRY 258
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+LT L+L NK+ + +D L L L++L++ +N+++ + +G L NL L++S N+LT
Sbjct: 84 DLTKLILSSNKLKCLSDDLKL-LPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLT 142
Query: 110 DVPCELSSLFHLKSLFLGGN 129
D+P EL L HL+SL L N
Sbjct: 143 DLPEELLQLKHLRSLLLQHN 162
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFNKINNMEN 66
++ S NKL S SL L + R LT L++ N LT LP + ++ L FN+
Sbjct: 457 INFSFNKLFSVSLELCMLYR-LTHLDVRNNCLTSLPDEMEALGKLQIINLAFNRFKVFP- 514
Query: 67 DYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D + L + L NN++ + + L L+ LDL +N++ VP EL + L++L
Sbjct: 515 DILYRIPTLEAILLGNNQVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNCTSLRTLL 574
Query: 126 LGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L GNP +T R IL + SR+
Sbjct: 575 LEGNPFRTPRVTILAKGTDAVLEYLRSRI 603
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R LNLS +L+ +P+ NL ++ D + T L+ L L +NK+
Sbjct: 37 RKSGHLNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILSSNKLK 96
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+S ++ L L +LD+ DN+LT +P + SL +L+ L + N + + ++LQ
Sbjct: 97 CLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQ 150
>gi|224058509|ref|XP_002188403.1| PREDICTED: leucine-rich repeat-containing protein 40 [Taeniopygia
guttata]
Length = 605
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L+ LD + N L + P M SL +L L N+L LP CK L L G N+I
Sbjct: 221 MKSLRQLDCTKNYLETVP-PKLATMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQI 279
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L+ L +L L++NKI V + L L LDL++N+++ +P L +L L
Sbjct: 280 EILNAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISRLPYTLGNLSQL 339
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI--- 177
K L L GNP++TVR D+LQ ++ ++ ++++ D DG G S + + + +
Sbjct: 340 KFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQD------DGPGPSEEPPVTAMTLPSQ 393
Query: 178 DKYKLDRTKTLTLC-----KVINIPESVY 201
K + TL L + IPE+V+
Sbjct: 394 SKVNIHAITTLKLLEYSDKQAAEIPEAVF 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
++ LT L+L N LT LP + K L + L FN+ + + L L + L NN+
Sbjct: 474 LQKLTHLDLRNNVLTALPEEMEALKRLHTINLAFNRFKVFPSVLY-RLPALETILLSNNQ 532
Query: 85 ISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+ + + L L LDL +N+L VP EL + +L+SL L GNP +T R +L
Sbjct: 533 VGSIDPVQLKGLDKLGTLDLQNNDLLQVPPELGNCENLRSLLLEGNPFRTPRAAVLAKGT 592
Query: 144 RIISHIKTSRL 154
+ SR+
Sbjct: 593 AAVLEYLRSRI 603
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
L L L+ NKL S S + + + +LT L++ NQLT LP +NL L + NK+ +
Sbjct: 86 LTKLILASNKLQSLSEDVQL-LPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRS 144
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L L L +++N++S++ +G L++L LD+S+N+LT +P + L +L
Sbjct: 145 LPEE-LLQLPHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVNLVR 203
Query: 124 LFLGGNPIKTVRNDI 138
L L N +K + D+
Sbjct: 204 LNLACNQLKELPADL 218
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNL+ LT +P NL ++ D + T L+ L L +NK+
Sbjct: 38 RRSGQLNLAGRGLTHVPEHVWRINLDTPEEAQQNLSFGAADRWWEQTDLTKLILASNKLQ 97
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+S +V L L +LD+ DN+LT +P L L +L+ L + N ++++ ++LQ
Sbjct: 98 SLSEDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSLPEELLQ 151
>gi|383849806|ref|XP_003700527.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Megachile rotundata]
Length = 604
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L LK+LDLSHN L+++ P ++R+L +L+ S NQL +LP D + + ++L NK+
Sbjct: 199 LVRLKSLDLSHN-LLTELPPDLTNIRALQKLDASCNQLEVLPPMGDLRKVETVMLQTNKL 257
Query: 62 NNMENDYFLTLTK----------------------LSLLNLKNNKISEVSSNVGDLINLA 99
+ TL + L +L L NNKI + ++ ++ L
Sbjct: 258 TTFPDMSGCTLLRILHLADNNITEIDMSCLEGVGQLKVLTLGNNKIETIPEDIIKMVYLE 317
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHC 158
I DLS N+LT +P + + +LK + GN ++ +R DI++ + RI+ HI+ S
Sbjct: 318 IFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRADIIRCGTPRILKHIRQS---IES 374
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINI 216
N++ ++ I DKY + TK L+L + +P+ V + T++++
Sbjct: 375 TNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLNLTELPQEVLENACKADVGTVDLSR 434
Query: 217 DK 218
+K
Sbjct: 435 NK 436
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-----MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
LKTLDLS N LV ID + LT L L N L LP + K L L L
Sbjct: 87 LKTLDLSFNSLV------VIDSKIECLSELTTLLLHDNLLENLPPEIGNLKKLEVLNLSN 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + + ++ L +L L LKNNK++++S +GDLI L LDLS+N L+++P + L
Sbjct: 141 NKLKQLPHQFY-QLNELRELCLKNNKLNKLSPAIGDLIMLTHLDLSNNNLSELPIGMGYL 199
Query: 119 FHLKSLFLGGN 129
LKSL L N
Sbjct: 200 VRLKSLDLSHN 210
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 28/150 (18%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
HL+ LDLS N L +SLP + + + L ELN+S+N+ +P D +L L+ N I
Sbjct: 473 HLQALDLSRNFL--ESLPSTLSLLKYLRELNISFNRYKKIPESVYDIDSLEILIANDNSI 530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ L KL++LNL NN I V P EL +L ++
Sbjct: 531 TDIDVPSLQKLQKLAILNLGNNNIGYV-----------------------PPELGNLKNI 567
Query: 122 KSLFLGGNPIKTVRNDILQDS-KRIISHIK 150
+SLFL GN K R IL S + I+++++
Sbjct: 568 RSLFLSGNLFKQPRQAILAKSTEEILAYLR 597
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
LS L TL L H+ L+ + P +++ L LNLS N+L LP L L L NK
Sbjct: 107 LSELTTL-LLHDNLLENLPPEIGNLKKLEVLNLSNNKLKQLPHQFYQLNELRELCLKNNK 165
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+N + + L L+ L+L NN +SE+ +G L+ L LDLS N LT++P +L+++
Sbjct: 166 LNKL-SPAIGDLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDLTNIRA 224
Query: 121 LKSL 124
L+ L
Sbjct: 225 LQKL 228
>gi|307187771|gb|EFN72743.1| Leucine-rich repeat-containing protein 40 [Camponotus floridanus]
Length = 604
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 20/227 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L+ LD+S N+L + LP ++R ++ N L P + C LT L L N I
Sbjct: 222 MRSLRILDVSFNQL--EVLPPLGELRKAEKIMFQSNNLKKFPDISGCSALTVLHLDNNNI 279
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ T L L L+NNKI + + LINL + DLS N ++ +P + L +L
Sbjct: 280 PEIDSQCLETAGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNL 339
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQE---STSEINI 177
K + GN IK +R DI++ + RI++HI+ Q D ++++E S+ +++
Sbjct: 340 KQFVIKGNNIKNIRADIIRCGTPRILTHIR--------QITDSTSVNTRELLQSSISVSV 391
Query: 178 ----DKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDK 218
DKY + TK L+L ++++PE V + + TI+++ +K
Sbjct: 392 RCYPDKYMMKNTKLLSLAGQNLLDLPEEVLENAVEASVTTIDLSRNK 438
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 27/174 (15%)
Query: 3 SHLKTLDLSHNKL--VSDSLPLFIDM---------------------RSLTELNLSYNQL 39
+ + T+DLS NKL +SD + + I + + L L++S N L
Sbjct: 427 ASVTTIDLSRNKLSELSDKMSIVISVMDLKLTSNHLTHLPEWIGEKYKYLQILDISKNYL 486
Query: 40 TMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLIN 97
LP+ C K L + L FN+ + + ++ SL+ +N I+ + S + L
Sbjct: 487 KSLPLSISCLKYLRDVDLSFNRFTEIPEAIYDVISLESLI-ANDNVIAAIDVSALEKLKK 545
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
LA+L+LS+N + VP EL +L +L++L L GN K R IL ++++ I+S+++
Sbjct: 546 LAVLNLSNNNIAHVPPELGNLKNLRNLSLSGNCFKYPRQAILMKETEEILSYLR 599
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
LKTLDLS N L++ + + + P L + L NK+ N+
Sbjct: 87 LKTLDLSSNSLITIDDKIQFLTELSNLNLQNNLLEELPPEVGSLHKLKIINLSDNKLENL 146
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+++ L +L L LKNN ++ + S +G+LI L +DLS N L +P + L L +L
Sbjct: 147 PPQFYM-LEELHELYLKNNHLNMLESEIGNLIMLTCMDLSYNNLNKLPIGMGYLVRLVTL 205
Query: 125 FLGGNPIKTVRNDI 138
L N IK + D+
Sbjct: 206 NLSYNMIKELPPDM 219
>gi|340727641|ref|XP_003402148.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 40-like [Bombus terrestris]
Length = 604
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L +LDL HN ++ + P +MR+L +LN SYNQL MLP + + + ++L NK+
Sbjct: 199 LVRLTSLDLGHN-MLKELPPDLTNMRALQKLNASYNQLEMLPPLGELRKVETVMLQSNKL 257
Query: 62 NNMEN-------------DYFLT---------LTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ D +T + +L L L NN+I + + L+ L
Sbjct: 258 TTFPDISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLE 317
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHC 158
I DLS N+LT +P + L +LK + GN I+ VR DI++ + RI+ HI R
Sbjct: 318 IFDLSHNKLTLIPKYIGLLPNLKQFVIDGNDIQNVRTDIIRCGTSRILKHI---RQGIKS 374
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC 191
N+D ++++ I D+Y + TK L+L
Sbjct: 375 TNLDVKEHVVADTSANIYPDRYTMQSTKLLSLA 407
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L+TLDLS N L P ++ LT LNL NQL LP + K L L L NK+
Sbjct: 87 LQTLDLSCNTLKKID-PQIENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEK 145
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++++ L +L LNLKNN I E+ VGD + L LDLS N L ++P + L L S
Sbjct: 146 FPHEFY-KLNELHELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTS 204
Query: 124 LFLGGNPIKTVRNDI 138
L LG N +K + D+
Sbjct: 205 LDLGHNMLKELPPDL 219
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF-NKI 61
+L+ LDLS N L SLP+ + + + L ELN+S+N+ +P N +L+ N I
Sbjct: 473 YLQILDLSRNLL--QSLPINLGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNLI 530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
+++ F + KL++LNL NN I V +G L NL L LS N
Sbjct: 531 TDIDVPSFQKIKKLAILNLANNNIGFVPPELGTLKNLRNLSLSGN 575
>gi|312373148|gb|EFR20955.1| hypothetical protein AND_18230 [Anopheles darlingi]
Length = 606
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L LDLS N L P+ ++R L + +N + LP T C+ L L + N I
Sbjct: 247 LRNLHKLDLSKNDLKRLP-PVMGELRKLECFYVQHNDIDELPDFTGCEALKELHMANNFI 305
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D+ L +L +L+L++NKI + + L +L LDLS+N ++ +P LS+L HL
Sbjct: 306 RTLPADFCENLPQLRVLDLRDNKIERLPDEIALLASLTRLDLSNNTISSLPSCLSTLAHL 365
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
SL + GNPI+++R DI+Q ++RI+ ++
Sbjct: 366 VSLQVDGNPIRSIRRDIIQCGTQRILKTLR 395
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 29/130 (22%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
+D+S NKL L + LTELN+S+N L +P
Sbjct: 466 VDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVP-----------------------S 502
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS---L 124
+F K++ LNL NN + E+ VG L+ L L++ +N+L C SS++ LK L
Sbjct: 503 FFSQFDKIAYLNLSNNSLEELPEVVGLLVTLRELNVVNNQLR---CLSSSVYELKGLEIL 559
Query: 125 FLGGNPIKTV 134
GN I+ +
Sbjct: 560 LASGNRIEEI 569
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLL---- 55
L+ L L+++ NKL LP F ++ L LNLS+N+ + P +D L L
Sbjct: 136 LTKLSKLNVARNKLAE--LPDSFFGLKELKHLNLSHNEFPEVHPNISDLIMLETLKGTNL 193
Query: 56 ---------------LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAI 100
+ FN IN + L +L L L NN+++E+ +++ +L NL
Sbjct: 194 YFHSRLRSRGHEPQDISFNSINLLPGGIGF-LVRLQQLTLNNNRLTELPNDIVNLRNLHK 252
Query: 101 LDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LDLS N+L +P + L L+ ++ N I
Sbjct: 253 LDLSKNDLKRLPPVMGELRKLECFYVQHNDI 283
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
E D + L+ L+L +N ++ +S N+ +L +L +L+L DN LT +P + +L L
Sbjct: 82 QEEDSWWNQKSLTTLDLSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGIGALTKLSK 141
Query: 124 LFLGGN 129
L + N
Sbjct: 142 LNVARN 147
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+ + +SLT L+LS N LT++ N++N L L++LNL++
Sbjct: 87 WWNQKSLTTLDLSSNTLTVIS------------------ENIQN-----LADLTVLNLQD 123
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
N ++ + +G L L+ L+++ N+L ++P L LK L L N V +I
Sbjct: 124 NALTSLPEGIGALTKLSKLNVARNKLAELPDSFFGLKELKHLNLSHNEFPEVHPNI 179
>gi|380014404|ref|XP_003691222.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
florea]
Length = 602
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK- 60
L L +LDL+HN ++ + P +MR+L +LN SYN L MLP + + + ++L NK
Sbjct: 199 LVRLVSLDLNHN-MLKELPPDLTNMRALQKLNASYNDLEMLPPLGELRKVETVMLQTNKL 257
Query: 61 ---------------------INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
I ++ + +L L L NN+I + + L+ L
Sbjct: 258 TTFPDMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLE 317
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHC 158
I DLS N++T +P + + ++K + GN +K +R DI++ + RI+ HI+
Sbjct: 318 IFDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNIRMDIIRCGTSRILKHIQQG---LKS 374
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINI 216
N+D + +++ I D+Y + TK L+L + IP+ V + T++++
Sbjct: 375 TNLDSKRHVTLNASTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLENACKADVGTVDLSR 434
Query: 217 DKY 219
+K+
Sbjct: 435 NKF 437
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR-----SLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
LK LDLS N L + ID + LT L L N L LPV + K L L L
Sbjct: 87 LKMLDLSCNSLKA------IDSKVECLTELTTLYLHNNLLEDLPVEIGNLKKLEILNLSN 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + +++ LT+L L+LKNN I ++ GD I L LDLS N L ++P + L
Sbjct: 141 NKLEKLPYEFY-KLTELHQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLIELPIGMGYL 199
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L SL L N +K + D+
Sbjct: 200 VRLVSLDLNHNMLKELPPDL 219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
+L+ LDLS N L +SLP I + + L ELN+S+N+ +P D +L L+ N I
Sbjct: 473 YLQILDLSKNCL--ESLPFNIGLLKYLQELNISFNRYKEIPESIYDVDSLEILIANDNLI 530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
N++ L KL +LNL NN I + +G+L NL L LS N
Sbjct: 531 TNIDILSLQKLQKLVILNLANNNIGYIPPELGNLKNLRNLSLSGN 575
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 29/171 (16%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNM 64
T+DLS NK + L I + + +L L+ NQLT +P +C K L L L N + ++
Sbjct: 429 TVDLSRNKFSTLPDELHI-ITKVADLKLTSNQLTHIPEWICEKYKYLQILDLSKNCLESL 487
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGD------------------------LINLAI 100
+ L L L LN+ N+ E+ ++ D L L I
Sbjct: 488 PFNIGL-LKYLQELNISFNRYKEIPESIYDVDSLEILIANDNLITNIDILSLQKLQKLVI 546
Query: 101 LDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDS-KRIISHIK 150
L+L++N + +P EL +L +L++L L GN K R IL S + I+++++
Sbjct: 547 LNLANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAILMKSTEEILAYLR 597
>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
Length = 683
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ DL N+L S +P I + +L EL L N+LT LP +L LLLG
Sbjct: 504 QLTSLEKWDLGKNELAS--VPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGC 561
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ D LT L L L N+++ V + +G L +L LDLSDN+LT VP E+ L
Sbjct: 562 NQLTSLPADIG-QLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQL 620
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L L+L GN + +V +I Q
Sbjct: 621 TSLTELYLNGNQLTSVPTEIAQ 642
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ DL N+L S +P I + +L EL L N+LT LP +L LLLG
Sbjct: 343 QLTSLEKWDLGKNELAS--VPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGC 400
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ D LT L L L N+++ V + +G L +L LDLSDN+LT VP E+ L
Sbjct: 401 NQLTSLPADIG-QLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQL 459
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L L+L GN + +V +I Q
Sbjct: 460 TSLTELYLNGNQLTSVPAEIAQ 481
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ L L +N+L S +P I + SLTELNL+ NQLT +P +L L LG
Sbjct: 228 QLTSLRELALDNNRLTS--VPAEIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGG 285
Query: 59 NKINNMEND---------YFL-------------TLTKLSLLNLKNNKISEVSSNVGDLI 96
N++ ++ D FL LT L L N++++ V + +G L
Sbjct: 286 NQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLT 345
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L DL NEL VP E+ L L+ L L GN + ++ +I Q
Sbjct: 346 SLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQ 389
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L L L N+L S +P I + SL +L+LS NQLT +P +LT L L
Sbjct: 412 QLTSLWELRLDGNRLTS--VPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNG 469
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L N++++ V + +G L +L DL NEL VP E+ L
Sbjct: 470 NQLTSVPAE-IAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQL 528
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN + ++ +I Q
Sbjct: 529 TALRELRLDGNRLTSLPAEIGQ 550
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 16 VSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLT 73
++ ++P I + S+ +L+L+ NQLT LP +L L L N++ ++ + LT
Sbjct: 195 LTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIG-QLT 253
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L+ LNL N+++ V + V L +L L L N+LT VP ++ L L+ LFL GN + +
Sbjct: 254 SLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTS 313
Query: 134 VRNDILQ 140
V +I Q
Sbjct: 314 VPAEIAQ 320
>gi|299470923|emb|CBN79907.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +K LD S N + + + +LT L+L N+LT +P + L + LGFN +
Sbjct: 252 LRSVKLLDFSRNGIETVPKNGLARLGALTSLDLRENKLTEVPPLPEGGRLAQVFLGFNLL 311
Query: 62 NNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+++ L ++ L+ L++++N+I ++ VG L L LD+S+N+L ++P L L H
Sbjct: 312 TSLDGAALLGVSAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAALGYLPH 371
Query: 121 LKSLFLGGNPIKTVRNDIL 139
L L + GNP++T+R +L
Sbjct: 372 LHRLAVDGNPLRTIRRSLL 390
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 2 LSHLKTLDLSHNKLVS----------DSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKN 50
LS + LS NKL + SLPL I +R EL+LS N L +P C+
Sbjct: 470 LSAVTRAKLSGNKLQAFLAPPAIAPPGSLPLSISIR---ELDLSSNDLGEVPPAIFACRG 526
Query: 51 LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI---NLAILDLSDNE 107
L L+L +N ++++ + L L L+L NN++ +GD++ L L+L +N+
Sbjct: 527 LQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLR----CLGDVVLMTWLRRLNLENND 582
Query: 108 LTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ VP EL L+SL L GNP + + +LQ
Sbjct: 583 ISPVPLELGLCTGLESLLLAGNPQRQISPSLLQ 615
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 28/142 (19%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL--------------------------L 56
F + L L+LS+NQ+T LP NL+ L+ L
Sbjct: 110 FWEACELQRLDLSFNQITELPAA--VSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDL 167
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N I + + L L L N++S + S+VG L L L+LSDN + +P +
Sbjct: 168 TGNAIRELPEEGLGAAVALKGLLLSGNRLSRLPSSVGSLHGLETLELSDNTIRSLPESID 227
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
L L +L + N + ++ +
Sbjct: 228 GLKRLATLTVSNNGLASLPESV 249
>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
Length = 574
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP CK L L +G N+I
Sbjct: 191 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 249
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ LT + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 250 EMLGAEHLKHLTSILVLDLRDNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKL-HL 308
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNPI+T+R +I+ + ++ ++ ++++
Sbjct: 309 KFLALEGNPIRTIRREIINKGTQEVLKYLRS 339
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L LN+S+N+L +LP T+ +NL L L
Sbjct: 76 LLPALTVLDIHDNQLTS--LPSAIRELENLQRLNVSHNKLKILPEEITNLRNLKGLYLQH 133
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L L L+L NN+++ + ++ L +L L+LS N+L +P E+S +
Sbjct: 134 NELTCIP-EGFEQLFNLEDLDLSNNRLTTIPASFS-LSSLVRLNLSSNQLKSLPAEISGM 191
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 192 KRLKHLDCNSNLLETI 207
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLL 56
+L L LDL +N L SLP +M SL L NLS+N+ +LP V L +L+
Sbjct: 442 VLQKLTFLDLRNNFL--SSLP--KEMESLIRLQTINLSFNRFRILPEVLYHIPTLETVLV 497
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N++ +++ + T+ NL LDL +N+L +P EL
Sbjct: 498 SNNQVGSVDPEKLKTME-----------------------NLITLDLQNNDLLQIPPELG 534
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 535 NCVNLRTLLLDGNPFRVPRAAIL 557
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 57 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQRLNVSHNK 112
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ + L NL LDLS+N LT +P SL
Sbjct: 113 LKILPEE-ITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIPASF-SLSS 170
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 171 LVRLNLSSNQLKSLPAEI 188
>gi|325190106|emb|CCA24588.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 780
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN----LTHLLLG 57
LS L +L L N+LVS F+ L L+L N+L +P KN L + LG
Sbjct: 215 LSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMPYLPSTKNSNQVLDRVFLG 274
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N++ + F+T ++LL+L++N++ + + + L L LDLS+N LTD+P L
Sbjct: 275 YNRLTEIPESTFVTRDSITLLDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHSLGY 334
Query: 118 LFHLKSLFLGGNPIKTVRND-ILQDSKRIISHIKT 151
+ L L L GNP++ +R I+ + + H++T
Sbjct: 335 IKQLTRLHLDGNPMRAIRRAVIVAGCQTLKKHLRT 369
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 16/192 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-------MRSLTELNLSYNQLTMLPVCTDC--KNLT 52
L LK L L N+L S +L + + L E+++S N L P +L
Sbjct: 495 LPRLKNLLLRKNQLTSTALQKLLRNKENGSIVSPLEEIDVSNNMLDRFPYGFGAFGISLE 554
Query: 53 HLLLGFNKINNMEN----DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
L+L +N + + + + L +L +L+L +NK++++ V +L LA +N +
Sbjct: 555 TLILSYNHLQTLADCPLEFSWAMLPRLGVLSLTDNKLNDLGK-VFELPGLASFSFENNNV 613
Query: 109 TDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMS 167
T VPCEL HL +L+L GNP KT+R+ I+ + S ++ H++ ++L +
Sbjct: 614 THVPCELGLCPHLHALYLNGNPQKTIRSGIIAKGSHAVLEHLR-NKLPQEPSRGKRSLAT 672
Query: 168 SQESTSEINIDK 179
+Q + + INI K
Sbjct: 673 TQLAQAVINIGK 684
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 39/203 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L LDLSHN+ S+ P + +R+L +LNLS+N LT LP
Sbjct: 122 LTQLVDLDLSHNQF-SNCFPAEVGKLRNLRDLNLSHNNLTALP---------------ES 165
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I N L+ L L++ NN++S + VG L L + N+L+ +P L L
Sbjct: 166 IGN--------LSFLESLSIDNNRLSALPEAVGKCTRLHALSVQSNQLSCLPKSLRDLSA 217
Query: 121 LKSLFLGGNPIKTVRNDILQDSKR-IISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL L N + ++ D R I+ ++ +RL V+ + S ++++++
Sbjct: 218 LTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRL------VEMPYLPSTKNSNQV---- 267
Query: 180 YKLDRTKTLTLCKVINIPESVYM 202
LDR L ++ IPES ++
Sbjct: 268 --LDRV-FLGYNRLTEIPESTFV 287
>gi|390332547|ref|XP_797039.3| PREDICTED: leucine-rich repeat-containing protein 40-like
[Strongylocentrotus purpuratus]
Length = 702
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L ++ L+LS N+L +LPL + M +L ++++ +N++T LP T CK+L L G N
Sbjct: 223 LKGVRMLELSSNRL--PALPLEMGYMSALEQIHIKFNRITSLPPFTKCKDLKELHAGNNN 280
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + +L+ L++L+L++NKIS + + + L ++++N ++ +P +L +L
Sbjct: 281 ITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANNNVSSLPYKLGNLRS 340
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK++ + GNP++ +R ILQ
Sbjct: 341 LKAMVVDGNPMRGIRXXILQ 360
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
M+ ++ LDL N L S+P F M + EL +SYN+ + +P V NL LL
Sbjct: 570 MMVNITRLDLGSNGL--SSIPSEFETMSMMRELVISYNRFSKVPDVVFTWTNLETLLANG 627
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I +++ F LTK+S L+L+NN I E VP EL +
Sbjct: 628 NQIGDIDLTGFKRLTKISTLDLQNNDIGE-----------------------VPPELGTF 664
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
L+SL L GN + R IL
Sbjct: 665 TSLRSLLLAGNRFRNPRPAIL 685
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 30/148 (20%)
Query: 27 RSLTELNLSYNQLTMLP---------VCTDCKN---------------LTHLLLGFNKIN 62
RS +LNLS LT +P V + KN L L+L NK+
Sbjct: 40 RSSGQLNLSNRSLTTVPQSVWNINTDVPPESKNVSLDNQDERWWDQNELVKLILASNKLE 99
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ ND L L L++L++ +NK++ + + +G+L NL L++S N LT++P ELS L L
Sbjct: 100 QLSNDIQL-LPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLTELPSELSQLHDLL 158
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIK 150
L + N I +LQD ++H++
Sbjct: 159 FLHVQHNKI-----SVLQDGLGELNHLE 181
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 26/125 (20%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
+L L LD+ NKL +SLP I ++R+L LN+S+N LT LP ++ L LL
Sbjct: 107 LLPALTVLDVHDNKL--NSLPTAIGELRNLQRLNISHNCLTELP--SELSQLHDLLF--- 159
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
L++++NKIS + +G+L +L LD+S+N+L+++P + SL
Sbjct: 160 ------------------LHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLR 201
Query: 120 HLKSL 124
L+SL
Sbjct: 202 KLRSL 206
>gi|348686390|gb|EGZ26205.1| hypothetical protein PHYSODRAFT_312299 [Phytophthora sojae]
Length = 759
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-----MRSLTELNLSYNQLTMLPV-CTDCKNLTHLL 55
L HL+ L L N+L+++S+ F+ +L E++L N L+ LP + ++L LL
Sbjct: 482 LPHLELLRLRKNQLLAESISYFLGDSPALGNTLKEMDLRSNNLSALPAEISQLRSLETLL 541
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
L +N+I ++ + L K+S++++ +NK+ + + D LA L +N L VPCEL
Sbjct: 542 LAYNRIETLDRFPWSQLAKVSVISVSDNKLRSLG-RIYDAPLLASLSFENNNLAKVPCEL 600
Query: 116 SSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
HL+++++ GNP +TVR ++ + S I+ ++K
Sbjct: 601 GLCPHLRAIYMNGNPQRTVRGAVIAKGSAEILVYLK 636
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +++ LDL N+L S S L + L L+L N+L + P + L + LG+N +
Sbjct: 207 LQNMQNLDLKKNRLESTSDAL-AGLSRLKFLDLRQNKLIVFPELPEGATLDQVFLGYNIL 265
Query: 62 NNMENDYFLTLT-KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ L + +++L++++NK + + +N+ L L LD+++N+L+D+P L L H
Sbjct: 266 SAIDETSILRIKDSVTVLDMRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLGYLKH 325
Query: 121 LKSLFLGGNPIKTVRNDIL 139
L + GNP++ +R ++
Sbjct: 326 LNHFIVDGNPLRAIRRSVI 344
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
L +DLSHN + +SD + + S+T + L+ N L +LP + + LT+L L N++
Sbjct: 71 LVKIDLSHNAIPSISDEI---AGLTSVTSIKLTQNALQVLPEGFFELQALTYLDLSHNQL 127
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ F L L L L NK+S + ++ L NL L + DN LT +P + L L
Sbjct: 128 EQDLSESFGALVGLKELVLSGNKLSRLPDSIALLENLETLHVDDNSLTALPESIGRLHKL 187
Query: 122 KSLF 125
L
Sbjct: 188 HVLM 191
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 60/162 (37%), Gaps = 46/162 (28%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------ 43
L L LDLSHN+L D F + L EL LS N+L+ LP
Sbjct: 114 LQALTYLDLSHNQLEQDLSESFGALVGLKELVLSGNKLSRLPDSIALLENLETLHVDDNS 173
Query: 44 ----------------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+ LT L F + NM+N L+LK N++
Sbjct: 174 LTALPESIGRLHKLHVLMAHTNQLTRLPASFGALQNMQN-----------LDLKKNRLES 222
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
S + L L LDL N+L P EL L +FLG N
Sbjct: 223 TSDALAGLSRLKFLDLRQNKLIVFP-ELPEGATLDQVFLGYN 263
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 28 SLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI- 85
+L LNLS NQL LP + L L + N++ ++ + L L LL L+ N++
Sbjct: 438 TLIHLNLSSNQLQALPASVGELVMLKTLTVEDNQLQSL-HPSIAALPHLELLRLRKNQLL 496
Query: 86 -SEVSSNVGDLINLA----ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+S +GD L +DL N L+ +P E+S L L++L L N I+T+
Sbjct: 497 AESISYFLGDSPALGNTLKEMDLRSNNLSALPAEISQLRSLETLLLAYNRIETL 550
>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
Length = 603
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ L+ LD + N L +S+P M SL +L L N+L LP CK L L G N+
Sbjct: 219 MKSLRQLDCTKNYL--ESVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQ 276
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + L LS+L L++NKI V + L L LDL++N+++ +P L +L
Sbjct: 277 IEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQ 336
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
LK L L GNP++T+R D+LQ ++ ++ ++++ D + +++ SE I+
Sbjct: 337 LKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAMTLPSESRINM 396
Query: 180 YKLDRTKTLTLC--KVINIPESVY 201
+ + K L +V IP+ V+
Sbjct: 397 HAITTLKLLDYSEKQVAVIPDDVF 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +LT L++ NQLT LP +NL L + NK+ ++ + L L+ L L L++N+
Sbjct: 104 LPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEE-LLQLSHLKGLLLQHNE 162
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S + G L++L LDLS+N LTD+P + L +L L L N +K + DI
Sbjct: 163 LSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADI 216
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LD+SHNKL S+P + + L L L +N+L+ LP +L L L N
Sbjct: 127 LENLQKLDVSHNKL--KSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNN 184
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L L L LNL N++ ++ +++ + +L LD + N L VP EL+S+
Sbjct: 185 HLTDIPKSFAL-LINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMA 243
Query: 120 HLKSLFLGGNPIKTV 134
L+ L+L N ++++
Sbjct: 244 SLEQLYLRKNKLRSL 258
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 13 NKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYF 69
NK+ S SL L + LT L++ N LT LP + + LT L L FN+ + +
Sbjct: 460 NKISSVSLEL-CTLHKLTHLDIRNNVLTSLP--EEMEALTRLQVINLSFNRFKVFPSVLY 516
Query: 70 LTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L ++L L NN++ + + + L LDL +N+L VP EL + L++L L G
Sbjct: 517 RMLALETIL-LSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEG 575
Query: 129 NPIKTVRNDILQDSKRIISHIKTSRL 154
NP +T R IL + SR+
Sbjct: 576 NPFRTPRAAILAKGTAAVLEYLRSRI 601
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 27 RSLTELNLSYNQLTMLP-----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
R +LNL+ L +P + D H L F D + T L+ L L
Sbjct: 36 RKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNLSFGAA-----DRWWEQTDLTKLILA 90
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQD 141
+N++ +S +V L L +LD+ DN+LT +P L L +L+ L + N +K++ ++LQ
Sbjct: 91 SNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQ- 149
Query: 142 SKRIISHIK 150
+SH+K
Sbjct: 150 ----LSHLK 154
>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
Length = 559
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ LD S N L +++P I M SL +L L N+L LP + CK L L G N+I
Sbjct: 179 LRQLDCSKNYL--ETVPSKIATMASLEQLYLRKNKLRSLPEFSSCKLLKELHAGENQIET 236
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L LS+L L++NKI V + L L LDL++N+++ +P L +L LK
Sbjct: 237 LNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKF 296
Query: 124 LFLGGNPIKTVRNDILQ 140
L L GNP++T+R D+LQ
Sbjct: 297 LALEGNPLRTIRRDLLQ 313
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
L L L+ NKL S S + + + +LT L++ NQLT LP +NL L + NK+ +
Sbjct: 41 LTKLILASNKLQSLSEDVKL-LAALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRS 99
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L L L +N+++ + + G L+NL LDLS+N LTD+P + L +L
Sbjct: 100 IPEE-LTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLTDIPTSFALLINLVR 158
Query: 124 LFLGGNPIKTVRNDI 138
L L GN ++++ DI
Sbjct: 159 LNLAGNKLESLPADI 173
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L+ L LD+ N+L S LP + + +L +L++S+N+L +P T +L LLL
Sbjct: 60 LLAALTVLDVHDNQLTS--LPSALGQLENLQKLDVSHNKLRSIPEELTQLPHLKSLLLHH 117
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ F L L L+L NN ++++ ++ LINL L+L+ N+L +P ++S++
Sbjct: 118 NELTHLPAG-FGQLVNLEELDLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPADISAM 176
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L N ++TV + I
Sbjct: 177 KSLRQLDCSKNYLETVPSKI 196
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L +L+ LD+SHNKL + + L ++SL L +N+LT LP NL L L
Sbjct: 84 LENLQKLDVSHNKLRSIPEELTQLPHLKSLL---LHHNELTHLPAGFGQLVNLEELDLSN 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ + L L L LNL NK+ + +++ + +L LD S N L VP +++++
Sbjct: 141 NHLTDIPTSFAL-LINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATM 199
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L+L N ++++
Sbjct: 200 ASLEQLYLRKNKLRSL 215
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN 66
++L N++ S SL L + + LT L++ N LT LP + L + L FN+ +
Sbjct: 411 VNLGFNRISSISLELCV-LHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNRFKVFPS 469
Query: 67 DYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ + L + L NN++ + + ++ L LDL +N+L VP EL + L++L
Sbjct: 470 VLY-RMGALETILLSNNQVGSIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNCETLRTLL 528
Query: 126 LGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L GNP +T R IL + SR+
Sbjct: 529 LEGNPFRTPRAAILAKGTAAVLEYLRSRI 557
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D + T L+ L L +NK+ +S +V L L +LD+ DN+LT +P L L +L+ L +
Sbjct: 33 DRWWEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTSLPSALGQLENLQKLDV 92
Query: 127 GGNPIKTVRNDILQDSKRIISHIKT 151
N ++++ ++ Q + H+K+
Sbjct: 93 SHNKLRSIPEELTQ-----LPHLKS 112
>gi|341650456|gb|AEK86517.1| toll3 [Litopenaeus vannamei]
Length = 1244
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L L LDLSHNK+ + +F D+ ++ L LS+NQL +P C NL L L +N
Sbjct: 332 LVRLMLLDLSHNKISQLNQQVFSDLYTVQFLRLSHNQLKTIPAAAFAACVNLHTLDLSYN 391
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F + LS L L NN ISEV N + +L +LA L+L+ NELT +P ++ L
Sbjct: 392 QLTSVPDKAFQGVGVLSFLALDNNNISEVGPNSLKNLSSLADLNLNGNELTAIPEAVAHL 451
Query: 119 FHLKSLFLGGNPIKTVRN 136
+LK+L LG N I + N
Sbjct: 452 KYLKTLDLGENQISDLAN 469
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ SL +LNL+ N+LT +P K L L LG N+I+++ N L L L L NN
Sbjct: 427 NLSSLADLNLNGNELTAIPEAVAHLKYLKTLDLGENQISDLANMPVKGLEFLYGLRLVNN 486
Query: 84 KISE--VSSNVGDLINLAILDLSDNELTDV 111
KI D+ +L IL+L+ N +T +
Sbjct: 487 KIRGNLTKDTFSDIPSLKILNLAKNSITAI 516
>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
Length = 1082
Score = 77.4 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L + LS+N+L S P +R LT L+LS NQLT LP KNLT L L N+
Sbjct: 36 LDNLTLISLSNNQLTSVP-PELAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQ 94
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
N+ + L L L+ +N+++ V + L NL LDL DN+LT VP EL+ L +
Sbjct: 95 FTNIPLE-LTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLEN 153
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L+L N + + ++ Q
Sbjct: 154 LKELYLSANQLTHIPQELAQ 173
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS N+L L +R+LT L+LS NQLT +P +NL L L N+
Sbjct: 151 LENLKELYLSANQLTHIPQEL-AQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQ 209
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + L L L L++NK+ V + L +L +L LS N+LT +P E + L +
Sbjct: 210 LTSLPPE-LAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKN 268
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
LK L L GN + ++ + Q ++++++L
Sbjct: 269 LKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQL 302
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L++L+ L L NKL+ + P + LT L+LSYNQLT LP KNL L L N+
Sbjct: 220 LANLRELYLRSNKLI-NVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQ 278
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+ ++ + F L L+ L L++N+++ + L NL LDL DN+L+++ E+
Sbjct: 279 LTSLPPE-FAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEI 332
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L L LS N+L P + +L L+L NQLT LP NL L L NK
Sbjct: 174 LRNLTLLSLSANQLTGVP-PALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNK 232
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+ + L L+LL+L N+++ + L NL L LS N+LT +P E + L +
Sbjct: 233 LINVPPE-LAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKN 291
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L L+L N + + + Q
Sbjct: 292 LTWLYLRSNQLANLPPEFAQ 311
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 49 KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
++LT++ L K++N L+L++L NN+++ V + L L LDLS+N+L
Sbjct: 24 EDLTNVPLALAKLDN-----------LTLISLSNNQLTSVPPELAQLRKLTALDLSNNQL 72
Query: 109 TDVPCELSSLFHLKSLFLGGNPIKTV 134
T +P EL+ L +L L+L N +
Sbjct: 73 TSLPPELAQLKNLTLLYLSNNQFTNI 98
Score = 37.7 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L L + ++ V + L NL ++ LS+N+LT VP EL+ L L +L L N + ++ +
Sbjct: 19 LYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPE 78
Query: 138 ILQ 140
+ Q
Sbjct: 79 LAQ 81
>gi|170040416|ref|XP_001847996.1| internalin A [Culex quinquefasciatus]
gi|167863954|gb|EDS27337.1| internalin A [Culex quinquefasciatus]
Length = 355
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLG 57
M L TL + +N+L DSLP + +L ELNLS N+ T P T+ K L +L LG
Sbjct: 88 MQCQLSTLIVKNNRLGDDSLPKSMLAAGTTLKELNLSGNRFTQFPEQVTELKALKYLYLG 147
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N+I N+ D + L L LL+L N I+E+ VG L NL L L DN L +P ++
Sbjct: 148 GNQITNVSKDIW-KLQNLQLLSLGGNLITEIPDTVGLLNNLHALVLCDNLLEALPPSIAR 206
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L HLKSL L N +K + DI+
Sbjct: 207 LVHLKSLLLHKNHLKHLPLDII 228
>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
Length = 602
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP CK L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 278 EKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S +S +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQNDSVTE 382
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L NN+++ V ++ L +L L+LS N+L +P ELS +
Sbjct: 161 NELTCIP-EGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLKSLPAELSGM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
++LS+NKL S SL L ++ LT L+L N L LP + ++LT L L FN+ +
Sbjct: 454 VNLSYNKLSSISLEL-CTLQKLTFLDLRNNFLNSLP--EEMESLTRLQTINLSFNRFKIL 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L + + NN++ + + + NL LDL +N+L +P EL + +L++
Sbjct: 511 P-EVLYRIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 27 RSLTELNLSYNQLTMLPVCT-----DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
R +LNLS L+ +P C D + L FN ++ + T L+ L +
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNA-----SERWWEQTDLTKLIIS 90
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NNK+ ++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 91 NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|12805599|gb|AAH02279.1| Lrrc40 protein [Mus musculus]
gi|74206533|dbj|BAE41533.1| unnamed protein product [Mus musculus]
gi|74212662|dbj|BAE31067.1| unnamed protein product [Mus musculus]
Length = 384
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 1 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQI 59
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 60 EKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 118
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 119 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 178
Query: 181 KLDRTKTL 188
+ K L
Sbjct: 179 AIATLKLL 186
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P
Sbjct: 252 LLQKLTFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFP-------------- 293
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V L+ NL LDL +N+L +P EL
Sbjct: 294 ---------EVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELG 344
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 345 NCVQLRTLLLDGNPFRVPRAAIL 367
>gi|148679902|gb|EDL11849.1| leucine rich repeat containing 40, isoform CRA_b [Mus musculus]
Length = 479
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 96 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQI 154
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 155 EKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 213
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 214 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 273
Query: 181 KLDRTKTL 188
+ K L
Sbjct: 274 AIATLKLL 281
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P
Sbjct: 347 LLQKLTFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFP-------------- 388
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V L+ NL LDL +N+L +P EL
Sbjct: 389 ---------EVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELG 439
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 440 NCVQLRTLLLDGNPFRVPRAAIL 462
>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Ailuropoda melanoleuca]
gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
Length = 603
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P +M SL L L N+L LP C+ L L +G N+I
Sbjct: 220 MKRLKHLDCNSN-LLEAVPPELANMESLELLYLRRNKLRFLPEFPSCRLLKELYVGENQI 278
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 279 EILGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HL 337
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDG--GGMSSQESTSEINI 177
K L L GNP++T+R +I+ + ++ ++ ++++ D D G + S S +N+
Sbjct: 338 KFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTLPSESRVNV 396
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 104 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQH 161
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L L L++ NN+++ V ++ L +L L+LS N+L +P E+S +
Sbjct: 162 NELTCIP-EGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEISGM 220
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++ V
Sbjct: 221 KRLKHLDCNSNLLEAV 236
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+ L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L +
Sbjct: 83 TDLTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSH 138
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + + L L L L++N+++ + L NL LD+S+N LT VP SSL
Sbjct: 139 NKLQILPEE-ITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSL 197
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 198 SSLVRLNLSSNQLKSLPAEI 217
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL +L NLS+N+ +LP
Sbjct: 471 MLQKLTFLDLRNNFL--NSLP--EEMESLIKLQTINLSFNRFKILP-------------- 512
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELS 116
+ + L + + NN++ V + + NL LDL +N+L +P EL
Sbjct: 513 ---------EVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELG 563
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 564 NCVNLRTLLLDGNPFRVPRAAIL 586
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 37 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 96
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N ++ + +I
Sbjct: 97 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEI 148
>gi|26375000|dbj|BAB27802.2| unnamed protein product [Mus musculus]
Length = 602
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 219 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 278 EKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 337 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 396
Query: 181 KLDRTKTL 188
+ K L
Sbjct: 397 AIATLKLL 404
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P
Sbjct: 470 LLQKLTFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V L+ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 563 NCVQLRTLLLDGNPFRVPRAAIL 585
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L +N+++ V ++ L +L L+LS N+L ++P E+S +
Sbjct: 161 NELTCIP-EGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV D+
Sbjct: 220 KRLKHLDCDANLLETVPPDV 239
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
RS +LNL+ L +P C N+ ++ + + T L+ L + +NK+
Sbjct: 36 RSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIISSNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEI 147
>gi|81916778|sp|Q9CRC8.2|LRC40_MOUSE RecName: Full=Leucine-rich repeat-containing protein 40
gi|26383433|dbj|BAB30951.2| unnamed protein product [Mus musculus]
Length = 602
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 219 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 278 EKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 337 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 396
Query: 181 KLDRTKTL 188
+ K L
Sbjct: 397 AIATLKLL 404
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P
Sbjct: 470 LLQKLTFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V L+ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 563 NCVQLRTLLLDGNPFRVPRAAIL 585
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L +N+++ V ++ L +L L+LS N+L ++P E+S +
Sbjct: 161 NELTCIP-EGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV D+
Sbjct: 220 KRLKHLDCDANLLETVPPDV 239
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
RS +LNL+ L +P C N+ ++ + + T L+ L + +NK+
Sbjct: 36 RSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIISSNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEI 147
>gi|31541911|ref|NP_077156.2| leucine-rich repeat-containing protein 40 [Mus musculus]
gi|26330340|dbj|BAC28900.1| unnamed protein product [Mus musculus]
gi|74194456|dbj|BAE37277.1| unnamed protein product [Mus musculus]
gi|148679901|gb|EDL11848.1| leucine rich repeat containing 40, isoform CRA_a [Mus musculus]
Length = 602
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 219 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 278 EKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 337 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 396
Query: 181 KLDRTKTL 188
+ K L
Sbjct: 397 AIATLKLL 404
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P
Sbjct: 470 LLQKLTFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V L+ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 563 NCVQLRTLLLDGNPFRVPRAAIL 585
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L +N+++ V ++ L +L L+LS N+L ++P E+S +
Sbjct: 161 NELTCIP-EGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV D+
Sbjct: 220 KRLKHLDCDANLLETVPPDV 239
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
RS +LNL+ L +P C N+ ++ + + T L+ L + +NK+
Sbjct: 36 RSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIISSNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEI 147
>gi|149026334|gb|EDL82577.1| similar to hypothetical protein FLJ20331, isoform CRA_c [Rattus
norvegicus]
Length = 479
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 96 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELYLAENQI 154
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 155 EKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 213
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 214 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIH 273
Query: 181 KL 182
+
Sbjct: 274 AI 275
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P L H+
Sbjct: 347 LLQKLAFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFPAV-----LYHI--- 394
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ L + + NN++ V L+ NL+ LDL +N+L +P EL
Sbjct: 395 ---------------STLETILISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELG 439
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 440 NCVQLRTLLLDGNPFRVPRAAIL 462
>gi|149026333|gb|EDL82576.1| similar to hypothetical protein FLJ20331, isoform CRA_b [Rattus
norvegicus]
Length = 602
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP C+ L L L N+I
Sbjct: 219 MKRLKHLDCDAN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELYLAENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 278 EKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++
Sbjct: 337 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVN 394
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L MLP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNKLKMLPEEITSLKNLKALHLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L +N+++ V ++ L NL L+LS N+L ++P E+S +
Sbjct: 161 NELTCIP-EGFEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLKNLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV D+
Sbjct: 220 KRLKHLDCDANLLETVPPDV 239
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P L H+
Sbjct: 470 LLQKLAFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFPAV-----LYHI--- 517
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ L + + NN++ V L+ NL+ LDL +N+L +P EL
Sbjct: 518 ---------------STLETILISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 563 NCVQLRTLLLDGNPFRVPRAAIL 585
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
RS +LNL+ L +P C N+ ++ + + T L+ L + +NK+
Sbjct: 36 RSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWEQTDLTKLIISSNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKMLPEEI 147
>gi|355699939|gb|AES01286.1| leucine rich repeat containing 40 [Mustela putorius furo]
Length = 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P +M SL L L N+L LP C+ L L +G N+I
Sbjct: 8 MKKLKHLDCNSN-LLETVPPELANMESLELLYLRRNKLRFLPEFPSCRLLKELHVGENQI 66
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NKI V + L +L LDLS+N+++ +PC L L HL
Sbjct: 67 EILGPEHLKHLNSILVLDLRDNKIKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HL 125
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 126 KFLALEGNPLRTIRREIINKGTQEVLKYLRS 156
>gi|340718794|ref|XP_003397848.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Bombus
terrestris]
Length = 347
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 12 HNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYF 69
HN L +DSLP F ++ L ELNLS N+LT P D +L +L LG N+I + D +
Sbjct: 95 HNNLTNDSLPKNFQNLSRLRELNLSGNRLTDFPEQVFDLTDLKYLYLGGNQITEISKDVW 154
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L +L +L++ N+++EV S +G+L++L L L DN L +P ++ L +LKSL L N
Sbjct: 155 -KLQRLQVLSMGGNRLTEVPSTLGELMSLQALVLCDNMLESLPSSIAKLTNLKSLLLHKN 213
Query: 130 PIKTVRNDIL 139
++T+ +I+
Sbjct: 214 RLRTLPTEII 223
>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
scrofa]
Length = 602
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP CK L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 278 EMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRVNIH 396
Query: 181 KLDRTKTLTLC--KVINIPESVY 201
+ KTL + IP+ V+
Sbjct: 397 AIITLKTLDYSDKQTALIPDEVF 419
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L L L+L NN++S + ++ L ++ L++S N+L +P E+S +
Sbjct: 161 NELTCIP-EGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLKSLPAEISGM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLL 56
ML L LDL +N L +SLP +M SL L NLS+N+ +LP V L +L+
Sbjct: 470 MLQKLTFLDLRNNFL--NSLP--EEMESLVRLQTINLSFNRFKILPEVLYRIPTLETILI 525
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N++ +++ T+ NL LDL +N+L +P EL
Sbjct: 526 SNNQVGSVDPQKMKTME-----------------------NLITLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 24 IDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+D+ NLS++ TD LT L++ NK+ ++ +D L L L++L++ +N
Sbjct: 60 VDIPEEANQNLSFSATERWWEQTD---LTKLIISNNKLQSLSDDLRL-LPALTVLDIHDN 115
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+++ + S + +L NL L++S N+L +P E+++L +LK L+L N
Sbjct: 116 QLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHN 161
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|197632025|gb|ACH70736.1| leucine rich repeat containing 40 [Salmo salar]
Length = 600
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++ +L+ LD +HN+L S P+ M SL +L L +N+L LP + L L +G N+
Sbjct: 217 VMKNLRLLDCTHNQLESIP-PVLSQMASLEQLYLRHNKLRFLPELPSSR-LKELHVGNNQ 274
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I +E ++ L+ LS+L L++NK+ + + L L LDL +N+++ +P L+ L
Sbjct: 275 IEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPK 334
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGG-----MSSQESTSE 174
LK L L GNP++ +R D+L + + ++ +++ R+ ++ DG G + S ++
Sbjct: 335 LKILTLEGNPLRGIRRDLLTKGTNELLKYLR-GRIK---EDPDGKGDEPDTAMTLPSQAK 390
Query: 175 INIDKYK----LDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKL 221
IN+ K LD ++ C +P+ V+ E +N K +L
Sbjct: 391 INVHTIKTLKILDYSEKQMAC----VPDDVF--DAVGSEPVASVNFSKNQL 435
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +LT L++ NQLT LP + ++L L L NK+ + + + +L L+ L L+ N
Sbjct: 103 LPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVW-SLKNLTCLQLQQNL 161
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + VG L NL +DLS+N+LT VP L +L HL L L N +K++ + I
Sbjct: 162 LEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGI 215
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L HL+ L LSHNKL LP + +++LT L L N L LP NL + L N
Sbjct: 126 LQHLQKLSLSHNKL--KELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNN 183
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L LNL +NK+ + S + + NL +LD + N+L +P LS +
Sbjct: 184 QLTAVP-DSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMA 242
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQN 160
L+ L+L N + R + + +SRL + H N
Sbjct: 243 SLEQLYLRHNKL------------RFLPELPSSRLKELHVGN 272
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I +++ L +L+LS+N+L LP KNLT L L
Sbjct: 102 LLPALTVLDVHDNQLTS--LPTSIGELQHLQKLSLSHNKLKELPKEVWSLKNLTCLQLQQ 159
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ L LT L ++L NN+++ V ++G+L +L L+LS N+L +P +S +
Sbjct: 160 NLLEHLPEGVGL-LTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVM 218
Query: 119 FHLKSL 124
+L+ L
Sbjct: 219 KNLRLL 224
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 8 LDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNME 65
++L NKL S LPL F ++ L ++L N LT LP+ + L + L FN+ +
Sbjct: 452 INLGFNKLTS--LPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSFNRFK-LF 508
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ + L + + NN++ ++ + L L+ LDL +N++ VP EL + L++L
Sbjct: 509 PEVLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCTSLRAL 568
Query: 125 FLGGNPIKTVRNDIL 139
L GNP + R I+
Sbjct: 569 MLDGNPFRNPRAAIV 583
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS LT +P NL ++ +D + T L+ L L +NK+
Sbjct: 35 RKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLPSNKLE 94
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+S +V L L +LD+ DN+LT +P + L HL+ L L N +K + ++
Sbjct: 95 ALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEV 146
>gi|110626127|ref|NP_001030098.1| leucine-rich repeat-containing protein 40 [Rattus norvegicus]
gi|76779394|gb|AAI05889.1| Leucine rich repeat containing 40 [Rattus norvegicus]
Length = 361
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
M SL L L N+L +LP C+ L L L N+I + ++ L + +L+L++NK+
Sbjct: 1 MESLELLYLRRNKLRVLPEFPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKL 60
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKR 144
V + L +L LDLS+N+++ +PC L +L HLK L L GNP++T+R +I+ + ++
Sbjct: 61 RSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQE 119
Query: 145 IISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
++ ++++ D D ++ SE ++
Sbjct: 120 VLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVN 153
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L SLP +M SLT+L NLS+N+ + P L H+
Sbjct: 229 LLQKLAFLDLRNNFL--SSLP--EEMSSLTKLQTINLSFNRFKVFPAV-----LYHI--- 276
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ L + + NN++ V L+ NL+ LDL +N+L +P EL
Sbjct: 277 ---------------STLETILISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELG 321
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 322 NCVQLRTLLLDGNPFRVPRAAIL 344
>gi|209156068|gb|ACI34266.1| Leucine-rich repeat-containing protein 40 [Salmo salar]
Length = 447
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++ +L+ LD +HN+L S P+ M SL +L L +N+L LP + L L +G N+
Sbjct: 217 VMKNLRLLDCTHNQLESIP-PVLSQMASLEQLYLRHNKLRFLPELPSSR-LKELHVGNNQ 274
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I +E ++ L+ LS+L L++NK+ + + L L LDL +N+++ +P L+ L
Sbjct: 275 IEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPK 334
Query: 121 LKSLFLGGNPIKTVRNDIL 139
LK L L GNP++ +R D+L
Sbjct: 335 LKILTLEGNPLRGIRRDLL 353
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +LT L++ NQLT LP + ++L L L NK+ + + + +L L+ L L+ N
Sbjct: 103 LPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVW-SLKNLTCLQLQQNL 161
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + VG L NL +DLS+N+LT VP L +L HL L L N +K++ + I
Sbjct: 162 LEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGI 215
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L HL+ L LSHNKL LP + +++LT L L N L LP NL + L N
Sbjct: 126 LQHLQKLSLSHNKL--KELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNN 183
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L LNL +NK+ + S + + NL +LD + N+L +P LS +
Sbjct: 184 QLTAVP-DSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMA 242
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQN 160
L+ L+L N + R + + +SRL + H N
Sbjct: 243 SLEQLYLRHNKL------------RFLPELPSSRLKELHVGN 272
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I +++ L +L+LS+N+L LP KNLT L L
Sbjct: 102 LLPALTVLDVHDNQLTS--LPTSIGELQHLQKLSLSHNKLKELPKEVWSLKNLTCLQLQQ 159
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ L LT L ++L NN+++ V ++G+L +L L+LS N+L +P +S +
Sbjct: 160 NLLEHLPEGVGL-LTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVM 218
Query: 119 FHLKSL 124
+L+ L
Sbjct: 219 KNLRLL 224
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
L R +LNLS LT +P NL ++ +D + T L+ L L
Sbjct: 30 LLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLP 89
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+NK+ +S +V L L +LD+ DN+LT +P + L HL+ L L N +K + ++
Sbjct: 90 SNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEV 146
>gi|380012454|ref|XP_003690298.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Apis
florea]
Length = 388
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 12 HNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYF 69
HN L +DSLP F ++ L ELNLS N+LT P+ D + +L LG N+I + D +
Sbjct: 136 HNNLTNDSLPKNFQNLSRLRELNLSGNRLTDFPLQILDLTEIKYLYLGGNQITEISKDIW 195
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L +L +L++ N+++EV S +G+L++L L L DN L +P ++ L +LKSL L N
Sbjct: 196 -KLQRLHVLSMGGNRLTEVPSTLGELMSLQALILCDNMLESLPSSIAKLTNLKSLLLHKN 254
Query: 130 PIKTVRNDIL 139
++T+ +I+
Sbjct: 255 RLRTLPTEII 264
>gi|328788137|ref|XP_394765.2| PREDICTED: leucine-rich repeat-containing protein 58-like [Apis
mellifera]
Length = 347
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 12 HNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYF 69
HN L +DSLP F ++ L ELNLS N+LT P+ D + +L LG N+I + D +
Sbjct: 95 HNNLTNDSLPKNFQNLSRLRELNLSGNRLTNFPMQILDLTEIKYLYLGGNQITEISKDVW 154
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L +L +L++ N+++EV S +G+L++L L L DN L +P ++ L +LKSL L N
Sbjct: 155 -KLQRLHVLSMGGNRLTEVPSTLGELMSLQALILCDNMLESLPSSIAKLTNLKSLLLHKN 213
Query: 130 PIKTVRNDIL 139
++T+ +I+
Sbjct: 214 RLRTLPTEII 223
>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
Length = 694
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 25/224 (11%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ LDL N LV+ LP + + R L L + +N + LP + L+ L N I++
Sbjct: 300 LQKLDLMKNDLVA--LPEDMGLLRKLQFLYVQHNDIKELPNFEGNEMLSELHASNNYIDH 357
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L +L+L++NKI+++ V L NL LD+++N ++ +P LS+L HL S
Sbjct: 358 VPKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLSTLAHLIS 417
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN------ 176
L + GNPIKT+R DILQ + RI+ + + DGG S+S
Sbjct: 418 LQVDGNPIKTIRRDILQCGTARILKTLHDRA--QAKERADGGAEDLPCSSSAAGSQLSMQ 475
Query: 177 ---------IDKYKLDRTKTLT--LCKVINIPESVYMRGMSSQE 209
DKYKL T+TL L + ++P V+ ++S+E
Sbjct: 476 QQQQLPANMTDKYKLRHTRTLAVNLEGLTDVPTHVF--ELASEE 517
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L+LSHNKL + P + L LN+S+N+ L P ++ L L G N
Sbjct: 205 LEKLVRLNLSHNKL-KELPPDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNNN 263
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN++ L +L+ L L NN I E+ ++ + +L LDL N+L +P ++ L
Sbjct: 264 INSLPGGIGF-LVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLVALPEDMGLLRK 322
Query: 121 LKSLFLGGNPIKTVRN 136
L+ L++ N IK + N
Sbjct: 323 LQFLYVQHNDIKELPN 338
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 10 LSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGFNKINNMEND 67
LSHN V +++P FI +T LNLS N + LP N L L + N+ + N
Sbjct: 548 LSHN--VINNVPPFISQFTRITFLNLSNNLIKDLPPEFGLLNTLRELNIANNRFEALPNA 605
Query: 68 YFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
+ L L +L +N+I ++ + + +L L+ LDL +N + VP L +L ++ L L
Sbjct: 606 LY-ELQGLEILIASDNQIKAINVAGLQNLPRLSTLDLRNNNIEYVPPTLGNLTNITHLEL 664
Query: 127 GGNPIKTVRNDIL-QDSKRIISHIK 150
GNP + R+ IL + + I+S+++
Sbjct: 665 VGNPFRQPRHQILMKGTDSIMSYLR 689
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 32 LNLSYNQLTMLPVCTDCKN--LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
++ + N L+ LP + +T L+L N INN+ + T+++ LNL NN I ++
Sbjct: 522 VDFARNHLSTLPKGLQHMSDLVTELVLSHNVINNVP-PFISQFTRITFLNLSNNLIKDLP 580
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
G L L L++++N +P L L L+ L N IK + LQ+ R+
Sbjct: 581 PEFGLLNTLRELNIANNRFEALPNALYELQGLEILIASDNQIKAINVAGLQNLPRL 636
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E D + L+ L+L +N ++ +S + +L+ L +L L DN L ++P ++ L L L
Sbjct: 152 EEDAWWNQVPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQIGKLEKLVRL 211
Query: 125 FLGGNPIKTVRNDI 138
L N +K + D+
Sbjct: 212 NLSHNKLKELPPDL 225
>gi|291398713|ref|XP_002715973.1| PREDICTED: leucine rich repeat containing 40 [Oryctolagus
cuniculus]
Length = 602
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L+ LD S N L S P M SL L L N+L LP CK L L +G N+I
Sbjct: 219 MKKLRHLDCSSNLLESIP-PELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D+ L+ + +L L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLAADHLKHLSSILVLELRDNKLKSVPDEISLLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S +S +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSDSVTE 382
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L + LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTT--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKSLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L NN+++ +S+ L L ++LS N L +P E+S +
Sbjct: 161 NELAVIP-EGFEQLSSLEDLDLSNNRLTTISAGFSSLSGLVRINLSSNHLKSLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L N ++++
Sbjct: 220 KKLRHLDCSSNLLESI 235
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLL 56
ML L LDL N L +SLP +M+SL L NLS+N+ +LP V L +L+
Sbjct: 470 MLQKLTFLDLRSNFL--NSLP--EEMKSLIRLQVINLSFNRFKILPEVLYHIPTLETILI 525
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N++ +++ T+ NL LDL +N+L +P EL
Sbjct: 526 SNNQVGSVDPQKMKTME-----------------------NLTTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 17 SDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
S S+P L R +LNLS L+ +P C N+ ++ ++ + T
Sbjct: 24 STSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDVPEEANQNLSFSTSERWWEQTD 83
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ L + NNK+ ++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K +
Sbjct: 84 LTKLIISNNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHNKLKIL 143
Query: 135 RNDI 138
+I
Sbjct: 144 PEEI 147
>gi|110763972|ref|XP_395550.3| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
mellifera]
Length = 602
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK- 60
L L +LDL+HN ++ + P +MR+L +LN SYN L +LP + + + ++L NK
Sbjct: 199 LVRLISLDLNHN-ILKELPPDLTNMRALQKLNASYNDLEILPPLGELRKVETVMLQTNKL 257
Query: 61 ---------------------INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
I ++ + +L L L NN+I + + L+ L
Sbjct: 258 TTFPDMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLE 317
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHC 158
I DLS N++T +P + + ++K L + GN IK +R DI++ + RI+ +I+
Sbjct: 318 IFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCGTSRILKYIQQG---LKS 374
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINI 216
N+D + +++ I D+Y + TK L+L + IP+ V + T++++
Sbjct: 375 TNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLENACKADVGTVDLSR 434
Query: 217 DKY 219
+ +
Sbjct: 435 NNF 437
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 5 LKTLDLSHNKLVS-DSLPLFIDMRSLTELNLSY---NQLTMLPV-CTDCKNLTHLLLGFN 59
LK LDLS N L + DS + LTEL Y N L LP+ + K L L L N
Sbjct: 87 LKMLDLSCNSLKAIDS-----KIECLTELTTLYLHNNLLEDLPIEIGNLKKLEILNLSNN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + ++++ L +L L+LKNN I ++ GD I L LDLS N LT++P + L
Sbjct: 142 KLEKLPHEFY-KLIELRQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLTELPIGMGYLV 200
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L SL L N +K + D+
Sbjct: 201 RLISLDLNHNILKELPPDL 219
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
+L+ LDLS N L +SLP I + + L ELN+S+N+ +P D +L L+ N I
Sbjct: 473 YLQILDLSKNCL--ESLPSNIGLLKYLQELNISFNRYKEIPESVYDVSSLEILIANDNLI 530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
N++ L KL++LNL NN I + +G+L NL L LS N
Sbjct: 531 TNIDILSLQKLQKLTILNLANNNIGYIPPELGNLKNLRNLSLSGN 575
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
+ + T+DLS N + L I + + +L L+ NQLT +P +C K L L L N
Sbjct: 425 ADVGTVDLSRNNFSTLPDELHI-ITKVADLKLTSNQLTHIPEWICEKYKYLQILDLSKNC 483
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD------------------------LI 96
+ ++ ++ L L L LN+ N+ E+ +V D L
Sbjct: 484 LESLPSNIGL-LKYLQELNISFNRYKEIPESVYDVSSLEILIANDNLITNIDILSLQKLQ 542
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDS-KRIISHIK 150
L IL+L++N + +P EL +L +L++L L GN K R IL S + I+++++
Sbjct: 543 KLTILNLANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAILMKSTEEILAYLR 597
>gi|45551891|ref|NP_731852.2| flyers-cup, isoform A [Drosophila melanogaster]
gi|45446477|gb|AAF54977.3| flyers-cup, isoform A [Drosophila melanogaster]
Length = 693
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 52/244 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 315 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 365
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 366 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 410
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 411 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 468
Query: 180 YKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINI-DKYKLDRTKTLT--LCKVINIP 236
+RG + I N D+YKL T+TL L ++ ++P
Sbjct: 469 ----------------------LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVP 506
Query: 237 ESVY 240
+ V+
Sbjct: 507 DQVF 510
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 201 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 259 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 317
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 318 KLDCLYLQHNDI 329
>gi|161078264|ref|NP_001097774.1| flyers-cup, isoform E [Drosophila melanogaster]
gi|158030248|gb|ABW08664.1| flyers-cup, isoform E [Drosophila melanogaster]
Length = 620
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 52/244 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 242 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 292
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 293 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 337
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 338 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 395
Query: 180 YKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINI-DKYKLDRTKTLT--LCKVINIP 236
+RG + I N D+YKL T+TL L ++ ++P
Sbjct: 396 ----------------------LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVP 433
Query: 237 ESVY 240
+ V+
Sbjct: 434 DQVF 437
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 128 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 185
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 186 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 244
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 245 KLDCLYLQHNDI 256
>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
Length = 1124
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+TLDLS+NKL LP I + L L+LS NQLT LP L L L N
Sbjct: 65 LTQLQTLDLSNNKLTQ--LPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +LT+L L+L NN+++E+ + L L DLS NELT++P LS L
Sbjct: 123 QLTELP-EAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSLSRLL 181
Query: 120 HLKSLFLGGNPIKTV 134
+L+ G N ++ V
Sbjct: 182 YLEIFDCGSNLLRQV 196
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ LDLS N++ LP I + L L+LS N+LT LP L L L N
Sbjct: 42 LTQLQQLDLSRNQVTQ--LPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNN 99
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +L +L LNL+NN+++E+ + L L LDLS+N+LT++P ++SL
Sbjct: 100 QLTELP-EAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLT 158
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+S L N + + N +
Sbjct: 159 QLQSFDLSHNELTELPNSL 177
Score = 45.4 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+LT+L L+L N+++++ + L L LDLS+N+LT +P ++SL L+ L L N
Sbjct: 41 SLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQ 100
Query: 131 I 131
+
Sbjct: 101 L 101
>gi|350396113|ref|XP_003484445.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Bombus
impatiens]
Length = 347
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L L HN +DSLP F ++ L ELNLS N+LT P D +L +L LG N+I
Sbjct: 88 LTCLVAKHNNFTNDSLPKNFQNLSRLRELNLSGNRLTDFPEQVFDLTDLKYLYLGGNQIT 147
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D + L +L +L++ N+++EV S +G+L++L L L DN L +P ++ L +LK
Sbjct: 148 EISKDVW-KLQRLQVLSMGGNRLTEVPSTLGELMSLQALVLCDNMLESLPSSIAKLTNLK 206
Query: 123 SLFLGGNPIKTVRNDIL 139
SL L N ++T+ +I+
Sbjct: 207 SLLLHKNRLRTLPTEII 223
>gi|354478360|ref|XP_003501383.1| PREDICTED: leucine-rich repeat-containing protein 40 [Cricetulus
griseus]
gi|344250474|gb|EGW06578.1| Leucine-rich repeat-containing protein 40 [Cricetulus griseus]
Length = 602
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 7/223 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD N L+ P M SL L L N+L +LP + L L LG N+I
Sbjct: 219 MQRLKHLDCDSN-LLETVPPDVGSMESLELLYLRRNKLRVLPEFPSSRQLKELHLGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L+ NK+ V + L +L LDLS+N+++ +PC L +L HL
Sbjct: 278 ETLGAEHLQQLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 337 KFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTLPSESRVNIH 396
Query: 181 KLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKL 221
+ K L + IP+ V+ S+ I +N K +L
Sbjct: 397 AIVTLKLLDYSDKQATLIPDDVFDAAKSN--TIISVNFSKNQL 437
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L MLP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNRLNMLPEEITSLKNLKVLHLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L NN+++ V + L +L L+LS N+L +P E+S +
Sbjct: 161 NELTGIP-EGFERLSGLEDLDLSNNRLATVPAGFALLSSLLRLNLSSNQLKSLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV D+
Sbjct: 220 QRLKHLDCDSNLLETVPPDV 239
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
+L L LDL +N L +SLP +M SLT+L NLS+N+ +LP L H+
Sbjct: 470 LLQKLTFLDLRNNFL--NSLP--EEMSSLTKLQTINLSFNRFKVLPAV-----LYHI--- 517
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
L + + NN++ V L+ NL+ LDL +N+L VP EL
Sbjct: 518 ---------------PTLEAVLISNNQVGSVDPQKVKLMENLSTLDLQNNDLLQVPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L++L L GNP + R IL
Sbjct: 563 NCVQLRTLLLDGNPFRVPRAAIL 585
>gi|28317202|gb|AAO39608.1| GH22674p, partial [Drosophila melanogaster]
Length = 647
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 47/222 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 269 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 319
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 320 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 364
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI-- 177
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++
Sbjct: 365 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 422
Query: 178 ----------------DKYKLDRTKTLT--LCKVINIPESVY 201
D+YKL T+TL L ++ ++P+ V+
Sbjct: 423 LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVF 464
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 155 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 212
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 213 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 271
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 272 KLDCLYLQHNDI 283
>gi|21358045|ref|NP_650306.1| flyers-cup, isoform B [Drosophila melanogaster]
gi|5911290|gb|AAD55737.1|AF184226_1 BcDNA.GH09045 [Drosophila melanogaster]
gi|7299797|gb|AAF54976.1| flyers-cup, isoform B [Drosophila melanogaster]
gi|220952870|gb|ACL88978.1| CG9611-PB [synthetic construct]
Length = 650
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 52/244 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 272 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 322
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 323 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 367
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 368 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 425
Query: 180 YKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINI-DKYKLDRTKTLT--LCKVINIP 236
+RG + I N D+YKL T+TL L ++ ++P
Sbjct: 426 ----------------------LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVP 463
Query: 237 ESVY 240
+ V+
Sbjct: 464 DQVF 467
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 158 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 216 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 274
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 275 KLDCLYLQHNDI 286
>gi|220942590|gb|ACL83838.1| CG9611-PB [synthetic construct]
Length = 651
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 52/244 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 272 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 322
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 323 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 367
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 368 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 425
Query: 180 YKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINI-DKYKLDRTKTLT--LCKVINIP 236
+RG + I N D+YKL T+TL L ++ ++P
Sbjct: 426 ----------------------LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVP 463
Query: 237 ESVY 240
+ V+
Sbjct: 464 DQVF 467
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 158 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 216 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 274
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 275 KLDCLYLQHNDI 286
>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
Length = 602
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP CK L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 278 EMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HL 336
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEVLKYLRS 367
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L NN+++ V ++ L +L L+LS N+L +P ELS +
Sbjct: 161 NELTCIP-EGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLMRLNLSSNQLKSLPAELSGM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 31/142 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLLG 57
L L LDL +N L SLP +M SLT L NLS+N+ +LP V L +L+
Sbjct: 471 LQKLTFLDLRNNFL--SSLP--EEMESLTGLQTINLSFNRFKILPEVLYRIPTLETILIS 526
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ +++ T+ NL LDL +N+L +P EL +
Sbjct: 527 NNQVGSLDPQKMKTME-----------------------NLITLDLQNNDLLQIPPELGN 563
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
+L++L L GNP + R IL
Sbjct: 564 CVNLRTLLLDGNPFRVPRAAIL 585
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 27 RSLTELNLSYNQLTMLPVCT-----DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
R +LNLS L+ +P C D + L FN ++ + T L+ L +
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNA-----SERWWEQTDLTKLIIS 90
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NNK+ ++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 91 NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|390177720|ref|XP_003736468.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859165|gb|EIM52541.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 616
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 46/292 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV----------------- 44
L L L L +N + D P ++MRSL L+L N LT LP
Sbjct: 201 LVRLTALLLPYNH-IKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHND 259
Query: 45 ---CTDCKN---LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
+D + LT L N I+N+ L L +L+L++NKI+++ + L NL
Sbjct: 260 IMELSDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDNKITQLPDELCLLRNL 319
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYH 157
LD+S+N + +P LS+L HL SL + GNPIK++R DILQ + RI+ ++ +
Sbjct: 320 NRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMVKS 379
Query: 158 CQNVDG---------GGMSSQESTSEINIDKYKLDRTKTLT--LCKVINIPESVYMRGMS 206
V+ GG + ++ + D+YKL T+TL L ++ ++PE V+ ++
Sbjct: 380 KDEVESDSGAGARLCGGQAGNDTAANYP-DRYKLRHTRTLAVNLEEITDVPEEVFQ--LA 436
Query: 207 SQECTIEINIDKYKLDRTKTLTLCKVINIPESVYMNRPFALTYNYVGDFFHF 258
+E ++ + +L RT L + NI + L +N +G F
Sbjct: 437 QKEGVHVVDFARNQL-RTVPDGLQHMQNIVTEL------VLAHNRIGQVPQF 481
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L++S NKL SD + L LN+SYN+ + L P +D L L G N
Sbjct: 132 LEKLMRLNVSRNKL-SDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNS 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ L +L+ L L N I ++ ++ ++ +L LDL N+LT +P ++ L
Sbjct: 191 IKSLPGGIGF-LVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRK 249
Query: 121 LKSLFLGGNPI 131
L+ L++ N I
Sbjct: 250 LQFLYIQHNDI 260
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 29 LTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LT L+LS N L+ + P + ++LT L+L N + + + L KL LN+ NK+S+
Sbjct: 89 LTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAE-IGKLEKLMRLNVSRNKLSD 147
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + L L L++S NE +++ ++S L L+ L G N IK++ I
Sbjct: 148 LPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGI 198
>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
Length = 522
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S +P I + SL+ELNL+ NQLT +P +L L LG N
Sbjct: 298 LTSLKVLGLRGNQLTS--VPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGN 355
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT LS LNL NN+++ V + + L +L L L N LT VP E+ L
Sbjct: 356 RLTSVPAEIG-RLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLT 414
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L L GN + +V +I Q
Sbjct: 415 SLKGLALYGNQLTSVPAEIGQ 435
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 28/162 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP----------------- 43
L+ L+ LDL+ N+L S +P+ I + SL + L N+LT +P
Sbjct: 206 LTALRELDLNGNQLTS--VPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDN 263
Query: 44 ----VCTDCKNLTHL-LLGFN--KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
V D LT L LG N ++ ++ + + LT L +L L+ N+++ V + +G L
Sbjct: 264 RLASVPADIGQLTSLEGLGLNGNQLTSVPAEIW-QLTSLKVLGLRGNQLTSVPAEIGQLT 322
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+L+ L+L++N+LT VP E+ L L+ LFLGGN + +V +I
Sbjct: 323 SLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ L L+ N+L S ++ + SL L L NQLT +P +L+ L L N+
Sbjct: 275 LTSLEGLGLNGNQLTSVPAEIW-QLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQ 333
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + + LT L L L N+++ V + +G L +L+ L+L++N+LT VP E+ L
Sbjct: 334 LTSVPAEIW-QLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTS 392
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFLGGN + +V +I
Sbjct: 393 LRGLFLGGNRLTSVPAEI 410
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 28 SLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+L EL+L+ NQLT +PV + LT L+ LG N++ ++ + LT L L+L +N+
Sbjct: 208 ALRELDLNGNQLTSVPV--EIGQLTSLVKFGLGGNELTSVPAEIG-QLTSLQWLDLSDNR 264
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ V +++G L +L L L+ N+LT VP E+ L LK L L GN + +V +I Q
Sbjct: 265 LASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQ 320
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL+ELNL+ NQLT +P +L L LG N
Sbjct: 344 LTSLRGLFLGGNRLTS--VPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGN 401
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L N+++ V + +G L L L L N+L VP E+ L
Sbjct: 402 RLTSVPAEIG-RLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLA 460
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+L N + +V +I Q
Sbjct: 461 TLKELWLNDNLLTSVPAEIGQ 481
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
V + VG L L LDL+ N+LT VP E+ L L LGGN + +V +I Q
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQ 251
>gi|198451552|ref|XP_002137316.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131539|gb|EDY67874.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 655
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 46/292 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV----------------- 44
L L L L +N + D P ++MRSL L+L N LT LP
Sbjct: 240 LVRLTALLLPYNH-IKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHND 298
Query: 45 ---CTDCKN---LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
+D + LT L N I+N+ L L +L+L++NKI+++ + L NL
Sbjct: 299 IMELSDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDNKITQLPDELCLLRNL 358
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYH 157
LD+S+N + +P LS+L HL SL + GNPIK++R DILQ + RI+ ++ +
Sbjct: 359 NRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMVKS 418
Query: 158 CQNVDG---------GGMSSQESTSEINIDKYKLDRTKTLT--LCKVINIPESVYMRGMS 206
V+ GG + ++ + D+YKL T+TL L ++ ++PE V+ ++
Sbjct: 419 KDEVESDSGAGARLCGGQAGNDTAANYP-DRYKLRHTRTLAVNLEEITDVPEEVFQ--LA 475
Query: 207 SQECTIEINIDKYKLDRTKTLTLCKVINIPESVYMNRPFALTYNYVGDFFHF 258
+E ++ + +L RT L + NI + L +N +G F
Sbjct: 476 QKEGVHVVDFARNQL-RTVPDGLQHMQNIVTEL------VLAHNRIGQVPQF 520
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L++S NKL SD + L LN+SYN+ + L P +D L L G N
Sbjct: 171 LEKLMRLNVSRNKL-SDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNS 229
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ L +L+ L L N I ++ ++ ++ +L LDL N+LT +P ++ L
Sbjct: 230 IKSLPGGIGF-LVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRK 288
Query: 121 LKSLFLGGNPI 131
L+ L++ N I
Sbjct: 289 LQFLYIQHNDI 299
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 29 LTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LT L+LS N L+ + P + ++LT L+L N + + + L KL LN+ NK+S+
Sbjct: 128 LTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAEIG-KLEKLMRLNVSRNKLSD 186
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + L L L++S NE +++ ++S L L+ L G N IK++ I
Sbjct: 187 LPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGI 237
>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
Length = 602
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSESAAE 382
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN+++ V ++ L +L L+LS N+L +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNQLKSLPAEI 216
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ MLP
Sbjct: 470 MLQKLTFLDLRNNFL--NSLP--EEMESLVRLQTINLSFNRFKMLP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ + L + + NN++ V ++ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
Length = 602
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSESAAE 382
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP + ++ +L +LN+S+N+L + P T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN+++ V ++ L +L L+LS N+L +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKIFPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNQLKSLPAEI 216
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ MLP
Sbjct: 470 MLQKLTFLDLRNNFL--NSLP--EEMESLVRLQTINLSFNRFKMLP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ + L + + NN++ V ++ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEI 147
>gi|395822105|ref|XP_003784364.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 40 [Otolemur garnettii]
Length = 600
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 5/200 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
LK LD S N L+ P M SL + L N+L LP C+ L L +G N+I +
Sbjct: 210 LKHLDCSSN-LLEAIPPELAGMESLELVYLWRNKLRFLPEFPSCRLLKELHIGENQIEVL 268
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HLK L
Sbjct: 269 KAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL-HLKFL 327
Query: 125 FLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLD 183
L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ + +
Sbjct: 328 ALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVNVHAIV 387
Query: 184 RTKTLTLC--KVINIPESVY 201
KTL + +IP+ V+
Sbjct: 388 TLKTLDYSDKQTPSIPDEVF 407
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+LT L++ NK+ ++ +D L L L++L++ +N+++ + +G+L NL L++S N+L
Sbjct: 83 DLTKLIISNNKLQSLTDDLRL-LPALTVLDIHDNQLASLPPAIGELENLQKLNVSHNKLK 141
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+P E+++L +LK L+L N + + Q
Sbjct: 142 ILPGEIANLRNLKGLYLQHNELSCISEGFEQ 172
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 8 LDLSHNKLVSDSLPL-------FIDMRSLTELNLSYNQ---LTMLPVCTDCKNLTHLLLG 57
++LS NKL SL L F+D+R L L++ L++ T L L
Sbjct: 442 VNLSFNKLSFVSLELCMLQKLTFLDLRYLLIPLLAFXNNYNLSLSEQETSLSKSVTLSLN 501
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELS 116
N+ + + LT ++L + NN+I V + + NL LDL +N+L +P EL
Sbjct: 502 INRFKVLPEVLYRILTLETVL-ISNNQIGSVDPQKMKTMENLTTLDLQNNDLLHIPPELG 560
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 561 NCVNLRTLLLDGNPFRVPRAAIL 583
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 36/174 (20%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLL--- 56
+L L LD+ N+L S P ++ +L +LN+S+N+L +LP + +NL L L
Sbjct: 103 LLPALTVLDIHDNQLASLP-PAIGELENLQKLNVSHNKLKILPGEIANLRNLKGLYLQHN 161
Query: 57 -------GFNKINNMEN------------------DYFLTLTKLSLLNLK-----NNKIS 86
GF +++++E+ DY + + L L LK +N +
Sbjct: 162 ELSCISEGFEQLSSLEDLHSRRGCYPFTGESTCVCDYMIAVASLWSLGLKHLDCSSNLLE 221
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ + + +L ++ L N+L +P E S LK L +G N I+ ++ + L+
Sbjct: 222 AIPPELAGMESLELVYLWRNKLRFLP-EFPSCRLLKELHIGENQIEVLKAEHLK 274
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ + + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLTFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+L +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLASLPPAIGELENLQKLNVSHNKLKILPGEI 147
>gi|7020356|dbj|BAA91094.1| unnamed protein product [Homo sapiens]
Length = 384
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 1 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 59
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 60 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HL 118
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R + IIS L Y + G S ES +E
Sbjct: 119 KFLALEGNPLRTIR-------REIISKGTQEVLKYLRSTIKDDGPSQSESATE 164
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 236 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 292
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 293 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 351
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 352 LLLDGNPFRVPRAAIL 367
>gi|410967549|ref|XP_003990281.1| PREDICTED: leucine-rich repeat-containing protein 40 [Felis catus]
Length = 592
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L + P +M SL L L N+L LP C+ L L +G N+I
Sbjct: 209 MKRLKHLDCNSNFLETVP-PELANMESLELLYLRRNKLRFLPEFPSCRLLKELHVGENQI 267
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L HL
Sbjct: 268 EMLGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HL 326
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++ +
Sbjct: 327 KFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDEPSQSDPVTETAMTLPSESRVNVH 386
Query: 181 KLDRTKTLTLC--KVINIPESVY 201
+ K L + IP+ V+
Sbjct: 387 AIVTLKILDYSDKQTTLIPDEVF 409
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
SLP I ++ +L +LN+S+N+L +LP T+ +NL L L N++ + + F L L
Sbjct: 109 SLPSAIRELENLQKLNVSHNKLQILPKEITNLRNLKGLYLQHNELTCIP-EGFEQLFNLE 167
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+L NN+++ V ++ L +L L+LS N+L +P E+S + LK L N ++TV
Sbjct: 168 DLDLSNNRLTTVPASFCSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNFLETV 225
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLL 56
ML L LDL +N L +SLP +M SL L NLS+N+ +LP V L +L+
Sbjct: 460 MLQKLTFLDLRNNFL--NSLP--EEMESLIRLQTINLSFNRFKILPEVLYHIPTLETILI 515
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N++ +++ + KL LDL +N+L +P EL
Sbjct: 516 SNNQVGSVDPQKMKAMEKL-----------------------ITLDLQNNDLLQIPPELG 552
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 553 NCVNLRTLLLDGNPFRVPRAAIL 575
>gi|195146072|ref|XP_002014014.1| GL24452 [Drosophila persimilis]
gi|194102957|gb|EDW25000.1| GL24452 [Drosophila persimilis]
Length = 655
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV----------------- 44
L L L L +N + D P ++MRSL L+L N LT LP
Sbjct: 240 LVRLTALLLPYNH-IKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHND 298
Query: 45 ---CTDCKN---LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
TD + LT L N I+N+ L L +L+L++NKI+++ + L NL
Sbjct: 299 ILELTDFEGNETLTELHASNNYISNIPVRMCENLPHLKVLDLRDNKITQLPDELCLLRNL 358
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRL--- 154
LD+S+N + +P L++L HL SL + GNPIK++R DILQ + RI+ ++ +
Sbjct: 359 NRLDVSNNSIDTLPVSLAALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMAKS 418
Query: 155 -DYHCQNVDGG----GMSSQESTSEINIDKYKLDRTKTLT--LCKVINIPESVYMRGMSS 207
D + G G + T+ D+YKL T+TL L ++ ++PE V+ ++
Sbjct: 419 KDEGESDSGAGARLCGGQAGNDTAANYPDRYKLRHTRTLAVNLEEITDVPEEVFQ--LAQ 476
Query: 208 QECTIEINIDKYKLDRTKTLTLCKVINIPESVYMNRPFALTYNYVGDFFHF 258
+E ++ + +L RT L + NI + L +N +G F
Sbjct: 477 KEGVHVVDFARNQL-RTVPNGLQHMQNIVTEL------VLAHNRIGQVPQF 520
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L++S NKL L+ + L LN+SYN+ + L P +D L L G N
Sbjct: 171 LEKLMRLNVSRNKLCDLPRELY-SLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNS 229
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ L +L+ L L N I ++ ++ ++ +L LDL N+LT +P ++ L
Sbjct: 230 IKSLPGGIGF-LVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRK 288
Query: 121 LKSLFLGGNPI 131
L+ L++ N I
Sbjct: 289 LQFLYIQHNDI 299
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 29 LTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LT L+LS N L+ + P + ++LT L+L N + ++ + L KL LN+ NK+ +
Sbjct: 128 LTNLDLSSNALSHISPKIENLQSLTVLILHDNALVDLPAEIG-KLEKLMRLNVSRNKLCD 186
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + L L L++S NE +++ ++S L L+ L G N IK++ I
Sbjct: 187 LPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGI 237
>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Meleagris gallopavo]
Length = 735
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
LK LD + N L +++P M SL +L L N+L LP CK L L G N+I
Sbjct: 354 LKQLDCTKNYL--ETVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEI 411
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L LS+L L++NKI V + L L LDL++N+++ +P L +L LK
Sbjct: 412 LNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKF 471
Query: 124 LFLGGNPIKTVRNDILQ 140
L L GNP++ +R D+LQ
Sbjct: 472 LALEGNPLRAIRRDLLQ 488
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L+ L++ NQLT LP +NL L + NK+ ++ + L L+ L L L++N++S
Sbjct: 238 ALSVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEE-LLQLSHLKSLLLQHNELS 296
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ G L++L LDLS+N LTD+P + L +L L L N +K + DI
Sbjct: 297 HLPDGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPADI 348
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
++ NK+ S SL L + LT L++ N LT LP + + LT L L FN+
Sbjct: 587 VNFGFNKISSVSLEL-CTLHKLTHLDIRNNVLTSLP--EEMEALTRLQVINLSFNRFKVF 643
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + LT ++L L NN++ V + + L LDL +N+L VP EL + L++
Sbjct: 644 PSVLYRILTLETIL-LSNNQVGSVDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRT 702
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L GNP +T R IL + SR+
Sbjct: 703 LLLEGNPFRTPRAAILAKGTAAVLEYLRSRI 733
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LD+SHNKL S+P + + L L L +N+L+ LP
Sbjct: 259 LENLQKLDVSHNKL--KSIPEELLQLSHLKSLLLQHNELSHLP----------------- 299
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
D F L L L+L NN ++++ ++ LINL L+L+ N+L ++P ++S++
Sbjct: 300 ------DGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPADISAMKS 353
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK L N ++TV +++
Sbjct: 354 LKQLDCTKNYLETVPSEL 371
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D + T L+ L L +N++ +S +V L L++LD+ DN+LT +P L L +L+ L +
Sbjct: 208 DRWWEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDV 267
Query: 127 GGNPIKTVRNDILQDSKRIISHIKT 151
N +K++ ++LQ +SH+K+
Sbjct: 268 SHNKLKSIPEELLQ-----LSHLKS 287
>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
troglodytes]
gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
Length = 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R + IIS L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIR-------REIISKGTQEVLKYLRSKIKDDGPSQSESATE 382
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNELKSLPAEI 216
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 454 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
Length = 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R + IIS L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIR-------REIISKGTQEVLKYLRSKIKDDGPSQSESATE 382
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 454 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L LGGNP + R IL
Sbjct: 570 LLLGGNPFRVPRAAIL 585
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNELKSLPAEI 216
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|383847867|ref|XP_003699574.1| PREDICTED: leucine-rich repeat-containing protein 58-like
[Megachile rotundata]
Length = 347
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 5 LKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L L HN L +DSLP F ++ L ELNLS N+LT P D L +L LG N I
Sbjct: 88 LSCLVAKHNNLTNDSLPKCFENLSGLRELNLSGNRLTDFPDQILDLAELKYLYLGGNYIT 147
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D + L +L +L++ N+++EV S +G+L +L L L DN L ++P ++ L +LK
Sbjct: 148 EISKDVW-KLQRLHVLSMGGNRLTEVPSTLGELKSLQALVLCDNMLENLPSSIAKLTNLK 206
Query: 123 SLFLGGNPIKTVRNDIL 139
SL L N ++T+ +I+
Sbjct: 207 SLLLHKNRLRTLPTEII 223
>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L+ L L+ N+L L +RSL EL LS NQLT +P + L L L N+
Sbjct: 76 LRSLQELYLAGNQLREVPAELG-QLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQ 134
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L +L+L N++ EV + +G L +L +LDLS N+L +VP EL L
Sbjct: 135 LREVPTELG-QLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 193
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L GN ++ V ++ Q
Sbjct: 194 LEKLYLAGNQLREVPAELGQ 213
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L LDLS N+L L +R L L+LS NQL +P L L L N+
Sbjct: 145 LRDLHMLDLSGNQLREVPAELG-QLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQ 203
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L N++ EV + +G L +L LDLS N+LT +P EL L
Sbjct: 204 LREVPAELG-QLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCG 262
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L GN ++ V ++ Q
Sbjct: 263 LQDLYLAGNQLREVPAELGQ 282
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+RSL EL L+ NQL +P ++L L L N++ + + L L L L N+
Sbjct: 76 LRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELG-QLRGLQELYLSGNQ 134
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+ EV + +G L +L +LDLS N+L +VP EL L L L L GN ++ V ++ Q S+
Sbjct: 135 LREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 193
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS L+ L L+ N+L L +R L EL LS NQL +P ++L L L N+
Sbjct: 191 LSRLEKLYLAGNQLREVPAELG-QLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQ 249
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L N++ EV + +G L +L +LDLS N+L +VP EL L
Sbjct: 250 LTGIPTELG-QLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 308
Query: 121 LKS 123
L +
Sbjct: 309 LHA 311
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L LDLS N+L L + L +L L+ NQL +P + L L L N+
Sbjct: 168 LRDLHMLDLSGNQLREVPAELG-QLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQ 226
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L N+++ + + +G L L L L+ N+L +VP EL L
Sbjct: 227 LREVPTELG-QLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQLRD 285
Query: 121 LKSLFLGGNPIKTVRNDILQDSK 143
L L L GN ++ V ++ Q S+
Sbjct: 286 LHMLDLSGNQLREVPAELGQLSR 308
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L L N++ EV + +G L +L L L+ N+L +VP EL L L+ L+L GN +
Sbjct: 53 LRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQL 112
Query: 132 KTVRNDILQ 140
+ ++ Q
Sbjct: 113 TGIPTELGQ 121
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L++ + +++V + +G L +L L L N+L +VP EL L L+ L+L GN ++ V +
Sbjct: 36 LDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAE 95
Query: 138 ILQ 140
+ Q
Sbjct: 96 LGQ 98
>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
gorilla gorilla]
Length = 602
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLWRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +IL + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREILSKGTQEV-------LKYLRSKIKDDGPSQSESATE 382
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKTLPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKTLPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNELKSLPAEI 216
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + K+L L L FN+ +
Sbjct: 454 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMKSLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYHIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +KT+ +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEI 147
>gi|159464078|ref|XP_001690269.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284257|gb|EDP10007.1| predicted protein [Chlamydomonas reinhardtii]
Length = 523
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
LS L +DLS N+L + +R + LNL N+LT LP C L L LG N+
Sbjct: 194 LSSLTDVDLSRNRLRGELGREVGLLRRVRTLNLRDNRLTSLPPTVAGCSGLVELFLGRNQ 253
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++++ + + L L L++NK++ + + + +L L +LDLS+N+L +P EL S+
Sbjct: 254 LSSVPPELGMC-AGLRTLELRDNKLTGIPAELCEL-QLGLLDLSNNDLRSLPPELGSMSS 311
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+SL L GNP+K++R ++
Sbjct: 312 LRSLPLDGNPLKSIRREV 329
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L L N+LV + P + SLT+L+LS N L LP + +LT + L N++
Sbjct: 150 LALLSAPDNRLV-ELPPGLSEAASLTKLDLSGNALAELPGYILPGLSSLTDVDLSRNRLR 208
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
L ++ LNL++N+++ + V L L L N+L+ VP EL L+
Sbjct: 209 GELGREVGLLRRVRTLNLRDNRLTSLPPTVAGCSGLVELFLGRNQLSSVPPELGMCAGLR 268
Query: 123 SLFL 126
+L L
Sbjct: 269 TLEL 272
>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
Length = 1098
Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L+ L+ L LS N+L S +P I + ++TEL L+ NQLT LPV ++L L LG
Sbjct: 286 LLTSLRELWLSGNRLTS--VPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGG 343
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L+L NN+++ V + +G L +L L L N+LT VP E+ L
Sbjct: 344 NQLTSVPAE-IRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQL 402
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+ L+L N + ++ +I Q
Sbjct: 403 TAMTELYLNANQLTSLPAEIWQ 424
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDL HN+L S +P+ + + SL LNL N+LT +P +L L L N
Sbjct: 563 LTSLEKLDLQHNQLTS--VPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDN 620
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + LT L L+L N+++ V + +G L +L L+L N+LT VP E+ L
Sbjct: 621 ELTSVPAEIW-QLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLT 679
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + +V DILQ
Sbjct: 680 SLETLDLDDNKLTSVPADILQ 700
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+TLDL NKL S + + SL L L N LT P +L L L NK
Sbjct: 678 LTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNK 737
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ LT L L+L+ N+++ V + +G L +L L L+DN LT VP EL L
Sbjct: 738 LTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTS 797
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L GN + V +I
Sbjct: 798 LEGLWLKGNQLTIVPAEI 815
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK LDL++N+L S +P I + SL L+L NQLT +P +T L L N
Sbjct: 356 LTSLKCLDLNNNQLTS--VPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNAN 413
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + LT L+ L L N+++ V + +G L +L L+LS N+LT+VP E+ L
Sbjct: 414 QLTSLPAEIW-QLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLR 472
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+ L GN + +V +I Q
Sbjct: 473 SRREFGLSGNQLTSVPAEIGQ 493
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L+ N+L S +P I + SL EL L NQLT +P L L L N
Sbjct: 920 LTSLEVLYLTENQLTS--VPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALARLELRDN 977
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L +N+++ V + +G L +L L LSDN LT VP ++ L
Sbjct: 978 QLTSLPAE-IGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSDNMLTSVPADIGQLT 1036
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L LGGN + +V +I Q
Sbjct: 1037 SLKELRLGGNQLTSVPEEIGQ 1057
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L+ LKTL+L N+L S +P I + SL L+L N+LT +P + +L L LG
Sbjct: 655 LTSLKTLELGGNQLTS--VPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGD 712
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + + + LT L L L+ NK++ V + +G L +L LDL N+LT VP E+
Sbjct: 713 NHLTSWPEE-IGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQ 771
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L L+ L+L N + +V ++ Q
Sbjct: 772 LTSLRWLWLNDNRLTSVPAELGQ 794
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L + LS N+L S +P I + SL E LS NQLT +P +L L L N
Sbjct: 471 LRSRREFGLSGNQLTS--VPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDN 528
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + L L L L N+++ V + VG L +L LDL N+LT VP E+ L
Sbjct: 529 KLTSVPAE-IGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLT 587
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L SL LG N + +V +I Q
Sbjct: 588 SLMSLNLGNNRLTSVPAEIGQ 608
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L +L L N+L S +P I + ++TEL L+ NQLT LP LT L L N
Sbjct: 379 LTSLISLHLGKNQLTS--VPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGN 436
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L+ LNL +N+++ V + +G L + LS N+LT VP E+ L
Sbjct: 437 QLTSVPAE-IGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLT 495
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L GN + +V +I
Sbjct: 496 SLEEFGLSGNQLTSVPAEI 514
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + +L L L NQLT LP L L L N
Sbjct: 943 LTSLRELYLYENQLTS--VPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSN 1000
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +N ++ V +++G L +L L L N+LT VP E+ L
Sbjct: 1001 QLTSVPAE-IGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLT 1059
Query: 120 HLKSLFLGGNPIKTV 134
L+ L+L N + +V
Sbjct: 1060 SLQGLYLWQNRLTSV 1074
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L L+LS N+L + +P I +RS E LS NQLT +P +L L N
Sbjct: 448 LRSLTELNLSSNQLTN--VPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGN 505
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L++NK++ V + +G L L L L N+LT VP E+ L
Sbjct: 506 QLTSVPAE-IGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLT 564
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L N + +V ++ Q + + ++ +RL
Sbjct: 565 SLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRL 599
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L EL + N LT +P +L L L N++ ++ + LT ++ L L N+
Sbjct: 264 LTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEE-IGQLTAMTELYLNANQ 322
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
++ + +G L +L +L L N+LT VP E+ L LK L L N + +V +I Q +
Sbjct: 323 LTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSL 382
Query: 145 IISHIKTSRL 154
I H+ ++L
Sbjct: 383 ISLHLGKNQL 392
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L+ L L+L N+++ + + +G L +L +L L++N+LT VP E+ L L+ L+L N +
Sbjct: 897 LSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQL 956
Query: 132 KTVRNDILQ 140
+V +I Q
Sbjct: 957 TSVPAEIGQ 965
>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 1185
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS+L L S NK+ +P I ++ +LT LNLS NQ+T +P V NLT L L N
Sbjct: 148 LSNLTVLIFSDNKITQ--IPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGN 205
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+LL+L +NKI+E+ + NL +LDLS N++T +P ++ L
Sbjct: 206 QITEIP-EAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLT 264
Query: 120 HLKSLFLGGNPIKTV 134
+LK L+L N I +
Sbjct: 265 NLKLLYLSDNQITEI 279
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 26 MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +LT L+L +NQ+T +P V + NLT L L N+I + + LT L+ L +N+
Sbjct: 401 LTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIP-EALANLTNLTQLYFSSNQ 459
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
I+++ + L NL LDLS N++T++P + SL L+ L L GNP+
Sbjct: 460 ITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPL 506
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L LS N++ +P I + +LT L+LS N++T +P T NLT L L N
Sbjct: 194 LTNLTLLYLSGNQITE--IPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSN 251
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L LL L +N+I+E+ + +L NL L LS N++T++P L++L
Sbjct: 252 QITKIP-EAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLT 310
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L GN I +
Sbjct: 311 NLTQLYLSGNQITEI 325
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L LDLS NK+ +P I + LT L+LS NQ+T +P NL L L
Sbjct: 216 QLTNLTLLDLSDNKITE--IPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSD 273
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L L+L +N+I+E+ + +L NL L LS N++T++P L++L
Sbjct: 274 NQITEIP-EALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANL 332
Query: 119 FHLKSLFLGGNPIKTV 134
+L L+L N I +
Sbjct: 333 PNLTRLYLYSNQITEI 348
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L LS N+ +++ ++ +LT L L NQ+T +P + NL L+L N+
Sbjct: 309 LTNLTQLYLSGNQ-ITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQ 367
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L L L +N+I+E+ + L NL LDL N++T +P +++L +
Sbjct: 368 IAEIP-ETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTN 426
Query: 121 LKSLFLGGNPIKTV 134
L L L N I +
Sbjct: 427 LTELHLSSNQITQI 440
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L LDL N++ +P I ++ +LTEL+LS NQ+T +P + NLT L N
Sbjct: 401 LTNLTRLDLRFNQITQ--IPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSN 458
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+I + LT L+ L+L N+I+E+ + L L LDL N L P L S
Sbjct: 459 QITQIPG-AIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPISPEILGS 515
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L LS N+ +++ ++ +LT+L LS NQ+T +P + NLT L L N+
Sbjct: 286 LTNLMQLHLSSNQ-ITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQ 344
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L L L +N+I+E+ + +L NL L L N++ ++P L+ L +
Sbjct: 345 ITEIP-EALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTN 403
Query: 121 LKSLFLGGNPIKTV 134
L L L N I +
Sbjct: 404 LTRLDLRFNQITQI 417
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 19 SLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+LPL + + +L +L++S N L +P V T +L L+L ++ + D LT L+
Sbjct: 71 TLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIP-DAIANLTNLT 129
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L N+I+++ + L NL +L SDN++T +P +++L +L L L N I +
Sbjct: 130 QLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQI 187
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 31 ELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME--NDYFLTLTKLSLLNLKNNKISE 87
EL+LS +LT LPV + L L+LG K+ E D+FL K+S NLK
Sbjct: 20 ELDLSGQELTELPVEIGKLQQLESLILG-KKVEGYERVGDHFLE--KVSGNNLKT----- 71
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
+ + L NL LD+S N L +P ++ + HL+ L L
Sbjct: 72 LPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELIL 110
>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
Length = 581
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 198 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 256
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 257 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HL 315
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R + IIS L Y + G S ES +E
Sbjct: 316 KFLALEGNPLRTIR-------REIISKGTQEVLKYLRSKIKDDGPSQSESATE 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 82 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 139
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 140 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 198
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 199 KRLKHLDCNSNLLETI 214
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 63 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 118
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 119 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 177
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 178 LVRLNLSSNELKSLPAEI 195
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 433 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 489
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 490 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 548
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 549 LLLDGNPFRVPRAAIL 564
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 15 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 74
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 75 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 126
>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
Length = 602
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R + IIS L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIR-------REIISKGTQEVLKYLRSKIKDDGPSQSESATE 382
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNELKSLPAEI 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
+DLS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 454 VDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
latipes]
Length = 595
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L+++K LD S+N+L SD M SL +L+L +N+L LP L L +G N++
Sbjct: 214 LTNVKLLDCSNNQL-SDVPASLAHMLSLEQLHLRHNRLQRLPQL-HAPALKELYVGNNQV 271
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E + L +S+L L++NKI V + L L LDL++N++ +P LS L +L
Sbjct: 272 GVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNL 331
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
K L + GNP++ +R D+L + + ++ +++ + + D + S + IN+
Sbjct: 332 KVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQARINVHSI 391
Query: 181 K----LDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKL 221
K LD++ +V +IP+ ++ + + + N K KL
Sbjct: 392 KTLGVLDQSD----MQVDSIPDEAFL--AAEGQNVVTANFSKNKL 430
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+TL LSHN+L SLP+ + M R+L L L N L LP +NLT L L N
Sbjct: 122 LQELQTLRLSHNQL--SSLPVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ LT L ++L +NK+S + + L N+ +LD S+N+L+DVP L+ +
Sbjct: 180 RLTDLPQSLG-RLTGLQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHML 238
Query: 120 HLKSLFLGGNPIK 132
L+ L L N ++
Sbjct: 239 SLEQLHLRHNRLQ 251
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM--LPVC------------------- 45
T + S NKL S L SLTELNL +NQL + VC
Sbjct: 422 TANFSKNKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLP 481
Query: 46 TDCKNLTHL---LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAIL 101
D +NL L +L +N+ + + + ++L + NN++S V + + L +L+ L
Sbjct: 482 ADMENLAKLRCIILSYNRFKSFPEVLYQMFSMETVL-MANNQVSSVDPARLARLEHLSTL 540
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DLS+N+L +P EL L+SL L GNP +T R I+
Sbjct: 541 DLSNNDLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIV 578
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 30/132 (22%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLG 57
+L L TLDL N+L ++L I +++ L L LS+NQL+ LPV C +NL L L
Sbjct: 98 LLPALVTLDLHDNQL--NTLHSAIGELQELQTLRLSHNQLSSLPVEVCM-LRNLRSLTLQ 154
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + N+ ++ G L NL LDLS N LTD+P L
Sbjct: 155 QNLLENLPEEF------------------------GQLENLTELDLSKNRLTDLPQSLGR 190
Query: 118 LFHLKSLFLGGN 129
L L+ + L N
Sbjct: 191 LTGLQKISLSHN 202
>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
Length = 602
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSESAAE 382
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP + ++ +L +LN+S+N+L + P T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN+++ V ++ L +L L+LS N+L +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKIFPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNQLKSLPAEI 216
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ MLP
Sbjct: 470 MLQKLTFLDLRNNFL--NSLP--EEMESLVRLQTINLSFNRFKMLP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ + L + + NN++ V ++ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEI 147
>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
Length = 602
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSESATE 382
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++++L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELQNLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F + L L+L NN+++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+ L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L +
Sbjct: 82 TDLTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSH 137
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + + L L L L++N+++ +S NL LDLS+N LT VP SSL
Sbjct: 138 NKLKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSL 196
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 197 SSLVRLNLSSNELKSLPAEI 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
++LS NKL SL L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 454 VNLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLP--EEVESLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEI 147
>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
leucogenys]
Length = 602
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ES +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQSESATE 382
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN ++ V ++ L +L L+LS NEL +P E++ +
Sbjct: 161 NELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 84 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ +S L NL LDLS+N LT VP SSL
Sbjct: 140 LKILPEE-ITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSS 198
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 199 LVRLNLSSNELKSLPAEI 216
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
++LS NKL S+ L + ++ LT L+L N L LP + ++L L L FN+ +
Sbjct: 454 VNLSFNKLSFISVELCV-LQKLTFLDLRNNFLNSLP--EEMESLVRLQTINLSFNRFKML 510
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKS 123
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++
Sbjct: 511 PEVLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRT 569
Query: 124 LFLGGNPIKTVRNDIL 139
L L GNP + R IL
Sbjct: 570 LLLDGNPFRVPRAAIL 585
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
Length = 608
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
+ LK L++S NK+ L +D + L L++ N + +PV + L L LG
Sbjct: 226 MKGLKDLNISSNKIKE----LKVDFQLLNKLERLDIRCNHIEEVPVFSTDNTLKELYLGS 281
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I N+ L+ ++++++ NKI V V ++ L DL++N+++ +PC + ++
Sbjct: 282 NRIKNLLGSTLQKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNM 341
Query: 119 FHLKSLFLGGNPIKTVRNDILQDS---------KRIISHIK--TSRLDYHCQ-------- 159
LKSL L GNP++T+R DI+Q RI I S +D + Q
Sbjct: 342 TQLKSLILNGNPLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINAT 401
Query: 160 -NVDGGGMSSQESTSEINIDKYKL 182
+ G + + E TSEI D + +
Sbjct: 402 HSSTGSNVDASEKTSEIPGDLWSV 425
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKIN 62
++ +D N L + PL + EL LS N+L+ LP + LT+L LG N++
Sbjct: 431 QIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSSMANFTKLTYLDLGNNQLG 490
Query: 63 NM---------------ENDYFL-------TLTKLSLLNLKNNKISEVS-SNVGDLINLA 99
N+ N+ F TL+ L +L +NKI + S + L L+
Sbjct: 491 NLPIEMESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDNKIESIDVSGLKQLSELS 550
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+LDL +N++ +VP EL +L LKSL LGGN + R IL
Sbjct: 551 VLDLQNNDIKEVPPELGTLKALKSLQLGGNLFRIPRAAIL 590
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%), Gaps = 12/165 (7%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNK 60
L LDLS N+L +SD + L + +L L++ NQL +P + + L+ L L N
Sbjct: 90 ELSKLDLSSNQLKAISDDVKL---LNALVALDIRDNQLENIPESVRELQQLSKLALSRNA 146
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + N L L L L++NK++E+ S +G+L++L ILD+S+N+L+++P + L
Sbjct: 147 LVGLPN-ATCDLINLKSLMLEHNKLTELPSEIGNLLHLEILDISNNQLSELPHSIQKLAC 205
Query: 121 LKSLFLGGNPIKTVRNDI-----LQDSKRIISHIKTSRLDYHCQN 160
LK L + N ++ + ++I L+D + IK ++D+ N
Sbjct: 206 LKFLNMSNNKLEVLPSEIAFMKGLKDLNISSNKIKELKVDFQLLN 250
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 31/165 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L L LS N LV LP D+ +L L L +N+LT LP ++ NL HL + +
Sbjct: 134 LQQLSKLALSRNALVG--LPNATCDLINLKSLMLEHNKLTELP--SEIGNLLHLEI-LDI 188
Query: 61 INNMENDYFLTLTKLS---LLNLKNNKISEVSSNVGDLINLAILDLSDN----------- 106
NN ++ ++ KL+ LN+ NNK+ + S + + L L++S N
Sbjct: 189 SNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIAFMKGLKDLNISSNKIKELKVDFQL 248
Query: 107 ----ELTDVPC---ELSSLFH----LKSLFLGGNPIKTVRNDILQ 140
E D+ C E +F LK L+LG N IK + LQ
Sbjct: 249 LNKLERLDIRCNHIEEVPVFSTDNTLKELYLGSNRIKNLLGSTLQ 293
>gi|320165418|gb|EFW42317.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 953
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L N++ S S+ F + +L L L NQ+T +P CT LT L LG N
Sbjct: 143 LTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQITSIPAAACTGLPALTELSLGIN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
+I ++ D F LT L+ L+++NN+I+ + + DL L L L N++T +P +
Sbjct: 203 QITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLAALTDLHLDGNQITSIPDFSFTG 262
Query: 118 LFHLKSLFLGGNPIKTV 134
L L +L L NPI T+
Sbjct: 263 LTALTTLALQNNPITTL 279
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLT---HLLLGF 58
L+ L L L +N++ S S F + +LT L+L YNQ+T + NLT +L L
Sbjct: 70 LTALTHLSLQYNQITSISGTAFTSLTALTYLSLQYNQITSISGTAFTFNLTALTYLSLDS 129
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELS 116
N+I ++ F LT L+ L+L N+I+ +S N L LA L L +N++T +P +
Sbjct: 130 NQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQITSIPAAACT 189
Query: 117 SLFHLKSLFLGGNPIKTVRND 137
L L L LG N I ++ D
Sbjct: 190 GLPALTELSLGINQITSIPAD 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L +N++ S F + +LT L + NQ+T +P T LTHL L +N
Sbjct: 22 LTALTELSLLYNQITGISAGTFTGLTALTALYFASNQITSIPADAFTGLTALTHLSLQYN 81
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN--VGDLINLAILDLSDNELTDVPC-ELS 116
+I ++ F +LT L+ L+L+ N+I+ +S +L L L L N++T +P +
Sbjct: 82 QITSISGTAFTSLTALTYLSLQYNQITSISGTAFTFNLTALTYLSLDSNQITSIPVGAFT 141
Query: 117 SLFHLKSLFLGGNPIKTV 134
L L L L N I ++
Sbjct: 142 GLTALTYLSLYTNQITSI 159
>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
Length = 650
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 5 LKTLDLSHNKLV--SDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
L+ LDL N ++ D + L +R L L + +N + LP + LT + N I
Sbjct: 249 LQKLDLMQNDIIKLPDDMGL---IRKLECLYIQHNDIKELPEFEGNEALTEVHASNNYIT 305
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ L L + +L++N+I+++ V L NL LD+S+N ++ +P LSSL HL
Sbjct: 306 SIPKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSLAHLV 365
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH-----------------CQNVD--- 162
+L + GNPIKT+R DI+Q I + R + +D
Sbjct: 366 NLQVEGNPIKTIRRDIIQCGTTRILKVLQDRAQAQPKEKGGANGGSGSGGSLTETMDALR 425
Query: 163 -GGGMSSQESTSEINIDKYKLDRTKTLT--LCKVINIPESVY 201
GGG ++ E D+YKL T TL L ++ N+P+ V+
Sbjct: 426 LGGGQTNDGIMPENFPDRYKLRHTHTLAVNLEELTNVPDQVF 467
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMEN 66
LDLS N L S P ++ +LT L L N L LP + LT L L NK++ +
Sbjct: 114 LDLSSNTLSRLS-PKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQLPR 172
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
+ F +L L LN+ N+ +E++ +V DL L LD S N+L +P + L L SL L
Sbjct: 173 ELF-SLPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLLL 231
Query: 127 GGNPIKTVRNDIL 139
N IK + D++
Sbjct: 232 PYNHIKELPPDLV 244
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGFNKIN 62
+K L LSHN L+S +P FI +T LNLS N L LP N L L + N+ +
Sbjct: 499 VKELVLSHN-LIS-FVPQFISQFTRITFLNLSNNLLKELPKEFGVLNTLRELNIANNRFD 556
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + + L +L +L N I E++ S + + LA LDL +N++ +P L +L ++
Sbjct: 557 CIPSCLY-ELQRLEILVASENHIKELNVSGLKAMSCLATLDLRNNDIEFIPPILGNLTNI 615
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
L L GNP + R+ IL + ++ I+S+++
Sbjct: 616 THLELIGNPFRQPRHQILIKGTESIMSYLR 645
>gi|293333389|ref|NP_001169465.1| uncharacterized protein LOC100383336 [Zea mays]
gi|224029533|gb|ACN33842.1| unknown [Zea mays]
Length = 584
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
S L LDL NKLV+ S +F+ LTELNL+ N LT +P
Sbjct: 160 SKLSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
C +L L +G N ++++ D TL+KL +L+L +N++ E +L L
Sbjct: 220 TSIPPSIKGCSSLAELYMGNNLLSSIPADIG-TLSKLGILDLHSNQLKEYPVGACNL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+ LDLS+N L+ +P EL + L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRL 333
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+EL S N ++ +P V C L+ L L NK+ + + F++ T L+ LNL N ++
Sbjct: 139 LSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTA 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ ++G L L LD+ N++T +P + L L++G N + ++ DI
Sbjct: 199 IPGSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAELYMGNNLLSSIPADI 249
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L+ L L+HN L L D+R SL LN+S+N+++ LP D L L + FN+
Sbjct: 47 LQKLILAHNNLEV----LREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQ 102
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + + L T L ++ NN ++E+ N+ +L+ L S+N ++ VP L+
Sbjct: 103 INTLPEEIGLA-TALVKVDFSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSK 161
Query: 121 LKSLFLGGN 129
L L L GN
Sbjct: 162 LSKLDLEGN 170
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP---VCTDCKNLTHLLLGFNKI 61
L +L L +N LV S + + L L+LS N + LP + L L L K+
Sbjct: 430 LSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNA-SALPEPSAVSALPQLQELYLRRMKL 488
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FH 120
+ N L +L N ++ V + + L LDLSDN +T +P EL L +
Sbjct: 489 HEFPNGLLGLKLLRIL-DLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELGLLEAN 547
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
L+ L L GNP++++R +L+ +K ++ ++K
Sbjct: 548 LQVLKLDGNPLRSIRRTLLERGTKAVLKYLK 578
>gi|195640496|gb|ACG39716.1| leucine-rich repeat-containing protein 40 [Zea mays]
Length = 586
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 34/227 (14%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
S L LDL NKLV+ S +F+ LTELNL+ N LT +P
Sbjct: 160 SKLSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
C +L L +G N ++++ D TL+KL +L+L +N++ E +L L
Sbjct: 220 TSIPPSIKGCSSLAELYMGNNLLSSIPADIG-TLSKLGILDLHSNQLKEYPVGACNL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL + L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDE 337
Query: 159 QNVDGGGMSSQE----STSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+ +++ + +++ +LD L++ V ++P + +
Sbjct: 338 EASGSRSTPTKDDQIAAARRLSLSSKELD----LSVLGVTSVPAAAW 380
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+EL S N ++ +P V C L+ L L NK+ + + F++ T L+ LNL N ++
Sbjct: 139 LSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTA 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ ++G L L LD+ N++T +P + L L++G N + ++ DI
Sbjct: 199 IPGSIGALPKLIRLDIHQNKITSIPPSIKGCSSLAELYMGNNLLSSIPADI 249
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L+ L L+HN L L D+R SL LN+S+N+++ LP D L L + FN+
Sbjct: 47 LQKLILAHNNLEV----LREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQ 102
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + + L T L ++ NN ++E+ N+ +L+ L S+N ++ VP L+
Sbjct: 103 INTLPEEIGLA-TALVKVDFSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSK 161
Query: 121 LKSLFLGGN 129
L L L GN
Sbjct: 162 LSKLDLEGN 170
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP---VCTDCKNLTHLLLGFNKI 61
L +L L +N LV S + + L L+LS N + LP + L L L K+
Sbjct: 432 LSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNA-SALPEPSAVSALPQLQELYLRRMKL 490
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FH 120
+ N L +L N ++ V + + L LDLSDN +T +P EL L +
Sbjct: 491 HEFPNGLLGLKLLRIL-DLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELGLLEAN 549
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIK 150
L+ L L GNP++++R +L+ +K ++ ++K
Sbjct: 550 LQVLKLDGNPLRSIRRTLLERGTKAVLKYLK 580
>gi|410920716|ref|XP_003973829.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Takifugu
rubripes]
Length = 597
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L+ +K LD S+N+L L M +L +L L +N+L +LP L L G N+I
Sbjct: 217 LTKVKMLDCSNNQLTEVPASLS-QMSALEQLYLRHNKLDLLPNL-KSPVLKDLYFGNNQI 274
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E + +LT +S+L L++NKI + + L +L LDL++N+++ +P L L HL
Sbjct: 275 EQLEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLSHL 334
Query: 122 KSLFLGGNPIKTVRNDIL 139
K + L GNP++ +R D+L
Sbjct: 335 KVVLLEGNPLRGLRRDLL 352
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 10 LSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMEND 67
LSHN+L S LP ++ ++++L L L +N L LP K+L L L N++ ++ +
Sbjct: 133 LSHNQLTS--LPAWVANLKNLASLALQFNLLVSLPEELGHLKSLIELDLSNNQLKDLPAN 190
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
LT L LNL +NK+S + ++G L + +LD S+N+LT+VP LS + L+ L+L
Sbjct: 191 VG-CLTCLQKLNLSHNKLSWLPDSIGQLTKVKMLDCSNNQLTEVPASLSQMSALEQLYLR 249
Query: 128 GNPIKTVRN 136
N + + N
Sbjct: 250 HNKLDLLPN 258
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHL---LLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
LT ++L NQ+ LP + KNLT L +L +N + + + L + L NN++
Sbjct: 469 LTHIDLRNNQMAELPA--EMKNLTKLRSIILNYNGFKSFPGVLY-QIVSLETILLGNNQV 525
Query: 86 SEV-SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
V S++ L +L+ LDLS+N+L +P EL L+ L L GNP + R I+
Sbjct: 526 DGVDPSHLMKLSHLSTLDLSNNDLLKIPPELGLCTSLRCLSLEGNPFRAPRAAIVAKGTD 585
Query: 145 IISHIKTSRL 154
+ SR+
Sbjct: 586 AVMEYLRSRI 595
>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
Length = 287
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L TL+LSHN+L S + +LT L+LSYNQLT +P T LT L LG N
Sbjct: 111 LTNLTTLNLSHNQLTEIS-EAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNH 169
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L+ L L N+I++V + L NL +L L +N++T++P ++ L +
Sbjct: 170 LTEIPKE-ISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQLTN 228
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGM 166
L++L L N + T+ I Q + +I + + LD + GG+
Sbjct: 229 LETLDLSYNQLTTIPESISQLTNLVILSLYQNPLDPIVHSAYSGGI 274
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGF 58
L++L L+L HN++ V +S+ + +LT L LS N++T + +NLT L+L
Sbjct: 42 LTNLTRLELDHNRITEVPESIA---QLTNLTTLYLSENRITEISEAIAPLRNLTMLILKN 98
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L+ LNL +N+++E+S + L NL L LS N+LT++P ++ L
Sbjct: 99 NQIAKIP-EAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKL 157
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L SL LG N + + +I Q
Sbjct: 158 TKLTSLRLGRNHLTEIPKEISQ 179
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+ +LT L L +N++T +P NLT L L N+I + ++ L L++L LKNN
Sbjct: 41 QLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEI-SEAIAPLRNLTMLILKNN 99
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+I+++ + L NL L+LS N+LT++ ++ L +L +L L N + + I + +K
Sbjct: 100 QIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTK 159
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L+L ++EV +V L NL L+L N +T+VP ++ L +L +L+L N I +
Sbjct: 25 LDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEA 84
Query: 138 I 138
I
Sbjct: 85 I 85
>gi|351713627|gb|EHB16546.1| Leucine-rich repeat-containing protein 40 [Heterocephalus glaber]
Length = 488
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P F M SL L L N+L LP C+ L L +G N+I
Sbjct: 141 MKKLKHLDCNSN-LLETIPPEFAGMESLELLYLRRNKLRFLPEFLSCRLLKELHVGENQI 199
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L+ + +L+L++NK+ V + L +L LDLS+N+++ +PC L +L L
Sbjct: 200 EMLGAEHLKHLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGNL-PL 258
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 259 KFLALEGNPLRTIRREIINKGTQEVLKYLRS 289
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
SLP I ++ +L +LN+S+N+L +LP T+ KNL L L N+++ + + F L+ L
Sbjct: 41 SLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLP-EGFEQLSSLE 99
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+L NN ++ V + L +L L+LS N+L ++P E+S + LK L N ++T+
Sbjct: 100 DLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAEISRMKKLKHLDCNSNLLETI 157
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 5 LKTLDLSHNK--LVSDSLPLFIDMRSLTELNLSYNQLTMLP--------VCTDCKNLTHL 54
LK LD S + L+ D + + +T +N S NQL +P + D K+L L
Sbjct: 324 LKLLDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKNQLCEIPKRNNFLNSLPEDMKSLIRL 383
Query: 55 L---LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTD 110
L FN+ + + T S+L + NN++ + ++ NL LDL +N+L
Sbjct: 384 QTINLSFNRFKVLPEVLYHIPTLESIL-ISNNQVGSLDPQKMKMMENLMTLDLQNNDLLQ 442
Query: 111 VPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+P EL + L++L L GNP + R IL
Sbjct: 443 IPPELGNCVSLRTLLLDGNPFRVPRAAIL 471
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 37 NQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
NQLT LP + +NL L + NK+ + + L L L L++N++S + L
Sbjct: 37 NQLTSLPSAIRELENLQKLNVSHNKLKILPEE-VTNLKNLKGLYLQHNELSCLPEGFEQL 95
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+L LDLS+N LT VP SSL L L L N +K + +I
Sbjct: 96 SSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAEI 138
>gi|440793425|gb|ELR14609.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1249
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 2 LSHLKTLDLSHNKLVS-DSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
LS L+ L+LS N+L + + PL + +L +L+LS N LT LP LT L L N+
Sbjct: 290 LSSLRVLNLSFNRLAALPTWPLGASLTALVDLDLSANALTALPPALP-PTLTSLHLTDNR 348
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +D+ L + L L L N +S + ++ L L LDL DN L +P + L
Sbjct: 349 LTALPDDFGLHVPVLRRLALARNALSALPASFPRLTRLRQLDLRDNRLASLPHDAHLLAK 408
Query: 121 LKSLFLGGNPIK 132
LK LFL GNP++
Sbjct: 409 LKVLFLEGNPLR 420
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ SLT L+L+ N LT LP + NL L + N++ + + F L+ L +LNL N
Sbjct: 220 ELSSLTRLHLAKNHLTALPPLFGLLSNLVELDVSENRLAELPSS-FSRLSSLEVLNLGMN 278
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVP 112
+++ + VGDL +L +L+LS N L +P
Sbjct: 279 ELAGLPPEVGDLSSLRVLNLSFNRLAALP 307
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L+ L+ L+L N ++ + G L NL LD+S+N L ++P S L L+ L LG N +
Sbjct: 221 LSSLTRLHLAKNHLTALPPLFGLLSNLVELDVSENRLAELPSSFSRLSSLEVLNLGMNEL 280
>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 515
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+HN+ + S + +++L LNL YNQLT LP +NL L LG N
Sbjct: 251 QLKNLRVLELTHNQFKTISKEIG-QLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNN 309
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN+++ + + +G L L L LS N LT +P E+ L
Sbjct: 310 QLTALPNEIG-QLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQ 368
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 369 NLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 411
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+TL+L +N+L + LP I +++L L L NQLT LP +NL L LG
Sbjct: 274 QLKNLQTLNLGYNQLTA--LPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGN 331
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L KL L L N+++ + + +G L NL L L N+LT +P E+ L
Sbjct: 332 NQLTALPNEIG-QLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQL 390
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L++L+L N + T+ DI Q
Sbjct: 391 KNLQTLYLRSNRLTTLSKDIEQ 412
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 26/178 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+ +L+ L L N+L LP I +++L +LNL NQ T+LP + +NL L LG
Sbjct: 182 QIQNLQFLYLGSNRLTI--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGS 239
Query: 59 NKINNMEND---------------YFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ + N+ F T++K L LNL N+++ + + +G L
Sbjct: 240 NRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQ 299
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
NL L L +N+LT +P E+ L +L+SL+LG N + + N+I Q K ++ T+RL
Sbjct: 300 NLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRL 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++L L +N+L + LP I ++ L EL LS N+LT LP +NL L LG
Sbjct: 320 QLQNLQSLYLGNNQLTA--LPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGS 377
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 378 NQLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQL 436
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 437 KNLQVLDLGSNQLTTLPKEIGQ 458
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L L +N+LT +P E+ +
Sbjct: 126 RLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQ 184
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+LG N + + +I Q
Sbjct: 185 NLQFLYLGSNRLTILPKEIGQ 205
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 19/159 (11%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+LS N+ +LP I +++L ELNL+ NQLT+LP KNL L
Sbjct: 48 VRVLNLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL-------- 97
Query: 63 NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N+ ++ F L K L L L +N+++ + + +G L NL +L+L+ N+ +P E+
Sbjct: 98 NLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEI 157
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L +L++L+LG N + + N+I Q ++ ++RL
Sbjct: 158 GQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRL 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L+ L LS N+L + LP I +++L EL L NQLT+LP KNL L L
Sbjct: 343 QLQKLQELYLSTNRLTT--LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRS 400
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 401 NRLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQL 459
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L N + T+ +I Q
Sbjct: 460 KNLQVFELNNNQLTTLPKEIGQ 481
>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Metaseiulus occidentalis]
Length = 608
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
L LDLS+N L LP I L +L +N+L LP + +L L + FN I
Sbjct: 226 QLVLLDLSNNCLTK--LPEAIGRCGHLEQLVARHNRLETLPPFSRENHLKELSVSFNAIK 283
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L L +L+L++NK++ + + +L +L LD+ +NEL +P L +L H+
Sbjct: 284 EFNVGHCEALVMLKILDLRSNKLASLPEEIANLQSLERLDIGNNELKILPNSLGALNHIN 343
Query: 123 SLFLGGNPIKTVRNDILQDS-----KRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
SL + GNP++++R DIL+ K + +K S + + GG QE ++
Sbjct: 344 SLLVEGNPLRSIRQDILRRGTVYLMKYLRDRLKESPMQQKIRKSRGG--DGQELVD--SV 399
Query: 178 DKYKLDRTKTL 188
D++ L +KTL
Sbjct: 400 DRFTLKSSKTL 410
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGF 58
+ L LD S NKL S +P F+ + L +NL NQL+ LP C +N+ L +
Sbjct: 453 LAQQLTELDFSFNKLTS--IPPFLSQAKHLQYMNLQSNQLSDLPPELSCLENIRELNISQ 510
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSS 117
N+ + + D + +L +N ++ + N+ + LA LDL +N ++ VP EL +
Sbjct: 511 NRFSKIP-DCVYGWKRFEILLASDNSLTSIDVENLAKIETLATLDLRNNSISQVPPELGN 569
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKR-IISHIK 150
L +KSL L GN + R IL S + I+++++
Sbjct: 570 LIQIKSLQLDGNLFRNPRPAILAKSTQDILAYLR 603
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 26/157 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L HL L+L N + LP ++ + +L LNLS+N++T LP C K+L L L N
Sbjct: 109 LEHLTILELQDNNI--SKLPQQMESLSNLIRLNLSHNKMTELPDCLCHLKDLRVLALHHN 166
Query: 60 KINNMEN----------------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+I ++ + D F L++ +NL NN + + +++ +I
Sbjct: 167 EIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANNCLEALPADMDSMIQ 226
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L +LDLS+N LT +P + HL+ L N ++T+
Sbjct: 227 LVLLDLSNNCLTKLPEAIGRCGHLEQLVARHNRLETL 263
>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 557
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L+LS+N+L +LP I ++ L LNL +NQL LP D +NL L+L N
Sbjct: 382 LQKLQYLNLSNNQL--RTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNN 439
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L KL L LKNNK+ + + L NL LDLS+N+L +P E+ L
Sbjct: 440 RLKTLPKEIW-KLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQ 498
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L+ L L GNP T +I+
Sbjct: 499 SLEDLDLSGNPFATFPKEIV 518
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LD+S+N+LV+ LP I +++L L L NQLT+LP +NL L+L N
Sbjct: 313 LQNLEGLDVSNNQLVT--LPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNN 370
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL LNL NN++ + +G L L L+L N+L +P E+ L
Sbjct: 371 QLTTLPQEIG-TLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQ 429
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L L N +KT+ +I + K ++K ++L + +D
Sbjct: 430 NLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEID 472
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L+ L L +N+L +SLP I +R L LNL +NQL +L + L L L N
Sbjct: 175 LQKLEWLSLKNNRL--ESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENN 232
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL +L LKNNK+ + +G L L L L +N L +P E+ L
Sbjct: 233 QLTVLPQEIG-KLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQ 291
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK L+LG N +T+ +I Q
Sbjct: 292 NLKDLYLGDNQFRTLPKEIDQ 312
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L+ L+L HN+L + ++ L L+L NQLT+LP + L L L NK
Sbjct: 198 LRKLEHLNLEHNQLAV-LVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNK 256
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + TL +L L+L NN++ + + L NL L L DN+ +P E+ L +
Sbjct: 257 LGSLPQEIG-TLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQN 315
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L + N + T+ N+I
Sbjct: 316 LEGLDVSNNQLVTLPNEI 333
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKI 61
+++ LDLS N+L + LP I + +L +LNL NQL++L + L L L N++
Sbjct: 39 NVRILDLSDNQLAT--LPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRL 96
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ N L KL LNL+NN+++ + +G L L L L +N L +P ++ L L
Sbjct: 97 ESLPNKIG-KLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKL 155
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L L N + + +I K +K +RL+
Sbjct: 156 EHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLE 189
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L L +N+L +SLP I +R L LNL NQL +L +
Sbjct: 83 LQKLEWLSLKNNRL--ESLPNKIGKLRKLEHLNLENNQLAVL---------------VQE 125
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I TL KL L+LKNN++ + + +G L L L+L N+L + E+ +L
Sbjct: 126 IG--------TLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQK 177
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N ++++ N I
Sbjct: 178 LEWLSLKNNRLESLPNKI 195
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L L +N+L +SLP I +R L LNL +NQL +L +
Sbjct: 129 LQKLEWLSLKNNRL--ESLPNKIGKLRKLEHLNLEHNQLAVL---------------VQE 171
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I TL KL L+LKNN++ + + +G L L L+L N+L + E+ +L
Sbjct: 172 IG--------TLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQK 223
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNV 161
L+ L L N + + +I + K + +K ++L Q +
Sbjct: 224 LEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEI 264
>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
Length = 1109
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L++LDLS N+L S P + + L L LS NQL+ LP L L LG N
Sbjct: 267 QLTNLQSLDLSSNQL-SSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSN 325
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + + LTKL L+L +N++S + + L NL LDLS N+L+ +P E+ L
Sbjct: 326 QLSSLPPE-IVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLT 384
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+SL+L N + ++ +I+Q +K
Sbjct: 385 KLQSLYLSSNQLSSLPPEIVQLTK 408
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++LDLS N+L S P + + L L+L NQL+ LP L L LG N
Sbjct: 175 QLTKLQSLDLSRNQL-SSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSN 233
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + + LTKL L+L +N++S + + L NL LDLS N+L+ +P E+ L
Sbjct: 234 QLSSLPPE-IVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLT 292
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+SL+L N + ++ +I+Q +K
Sbjct: 293 KLQSLYLSSNQLSSLPPEIVQLTK 316
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++LDL N+L S P + + +L L+LS NQL+ LP L L L N
Sbjct: 244 QLTKLQSLDLGSNQL-SSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + + LTKL L+L +N++S + + L L LDL N+L+ +P E+ L
Sbjct: 303 QLSSLPPE-IVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLT 361
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+SL L N + ++ +I+Q +K
Sbjct: 362 NLQSLDLSSNQLSSLPPEIVQLTK 385
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L++L+TL L N+L SLP I + +L L+L NQL+ LP NL L LG
Sbjct: 37 QLTNLQTLHLDSNQL--SSLPPKIGQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGN 94
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + LT L L+L N++S + +G L NL LDL N+L+ +P E L
Sbjct: 95 NQLSSLPPE-IGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQL 153
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
+L+SL LG N + ++ +I Q +K
Sbjct: 154 TNLQSLDLGSNQLSSLPPEIGQLTK 178
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L++L++LDL N+L SLP I + L L+LS NQL+ LP L L L
Sbjct: 152 QLTNLQSLDLGSNQL--SSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRS 209
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + F LTKL L+L +N++S + + L L LDL N+L+ +P E+ L
Sbjct: 210 NQLSSLPPE-FGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQL 268
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
+L+SL L N + ++ +I+Q +K
Sbjct: 269 TNLQSLDLSSNQLSSLPPEIVQLTK 293
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L++L+TL L N+L SLP I + +L L+L NQL+ LP NL L L
Sbjct: 60 QLTNLQTLHLRSNQL--SSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWI 117
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + LT L L+L +N++S + G L NL LDL N+L+ +P E+ L
Sbjct: 118 NQLSSLPPE-IGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQL 176
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L+SL L N + ++ +I+Q +K
Sbjct: 177 TKLQSLDLSRNQLSSLPPEIVQLTK 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++LDL N+L S P + + L L+L NQL+ LP NL L L N
Sbjct: 313 QLTKLQSLDLGSNQL-SSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSN 371
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + + LTKL L L +N++S + + L L LDL N+L+ +P E+ L
Sbjct: 372 QLSSLPPE-IVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLS 430
Query: 120 HLKSLFLGGNPI 131
+LK L L NP+
Sbjct: 431 NLKKLDLRRNPV 442
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L++L+TL L +N+L SLP I + +L L+L NQL+ LP NL L L
Sbjct: 83 QLTNLQTLHLGNNQL--SSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDS 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + F LT L L+L +N++S + +G L L LDLS N+L+ +P E+ L
Sbjct: 141 NQLSSLPPE-FGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQL 199
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L+SL L N + ++ + Q +K
Sbjct: 200 TKLQSLDLRSNQLSSLPPEFGQLTK 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++L LS N+L S P + + L L+L NQL+ LP L L LG N
Sbjct: 290 QLTKLQSLYLSSNQL-SSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSN 348
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + + LT L L+L +N++S + + L L L LS N+L+ +P E+ L
Sbjct: 349 QLSSLPPE-IVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLT 407
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+SL LG N + ++ +I Q
Sbjct: 408 KLQSLDLGSNQLSSLPREIRQ 428
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 29 LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+TEL+LSY LT+LP NL L L N+++++ LT L L+L++N++S
Sbjct: 18 VTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPK-IGQLTNLQTLHLRSNQLSS 76
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ +G L NL L L +N+L+ +P E+ L +L+SL L N + ++ +I Q
Sbjct: 77 LPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQ 129
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++LDL N+L S P + + +L L+LS NQL+ LP L L L N
Sbjct: 336 QLTKLQSLDLGSNQL-SSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSN 394
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+++++ + + LTKL L+L +N++S + + L NL LDL N + +P E+
Sbjct: 395 QLSSLPPE-IVQLTKLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPVP-IPPEI 448
>gi|440904131|gb|ELR54685.1| Leucine-rich repeat-containing protein 40 [Bos grunniens mutus]
Length = 404
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 31/179 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLL-- 56
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 57 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 114
Query: 57 --------GFNKINNMEN---------------DYFLTLTKLSLLNLKNNKISEVSSNVG 93
GF ++NN+E+ ++ L + +L+L++NK+ V +
Sbjct: 115 NELTCIPEGFEQLNNLEDLELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEIT 174
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
L +L LDLS+N+++ +PC L L HLK L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 175 LLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRS 232
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
NL LDL +N+L +P EL + +L++L L GNP + R IL
Sbjct: 345 NLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAIL 387
>gi|221117516|ref|XP_002157758.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Hydra
magnipapillata]
Length = 608
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 29/178 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV---------CTDCK-- 49
L +K LDLS N L S LP F ++SL LNLS N+LT+LP +C
Sbjct: 193 LVQIKKLDLSKNLLTS--LPNSFDSLKSLINLNLSTNKLTVLPKGFGKLTSLEIFECSYN 250
Query: 50 ------------NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
N+ L LG+N+I +E++ F + L L+L++N ISE+ + L
Sbjct: 251 LITTFTTFDDQTNIKQLFLGYNRIQKIEDNAFEKMQSLVSLSLRDNAISEIPESFTKLRT 310
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRL 154
L DLS+N L+ +P + + +LKSL L GN ++++R DI+ + + I++++K SRL
Sbjct: 311 LERADLSNNSLSTLPNAVGKM-NLKSLTLDGNSMRSIRRDIVDRGTNAILAYLK-SRL 366
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKI 61
S L LD+SHNKL S+ L + L L+LS+N L+ LP + ++L ++L FNK
Sbjct: 455 STLSELDISHNKL-SNILDTVNILTKLVFLDLSHNVLSSLPSSISQLEHLLEVVLSFNKY 513
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVG--DLINLAILDLSDNELTDVPCELSSLF 119
+++ F KL L L NN+I+++ VG ++ L LDLS+N + VP +L ++
Sbjct: 514 SSIPPCLF-KCKKLQTLLLSNNQITDIDV-VGLLEMKCLRTLDLSNNNIACVPPQLGNVE 571
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L+SL L GNP + R IL
Sbjct: 572 WLQSLNLDGNPFRNPRAQIL 591
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++ L +L+LS+N+LT LP D T L +L L N
Sbjct: 123 ELKELGKLHLSHNKLTSLP-----------------------DSLCQATALKVLLLAGNS 159
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+ + N G LINL LDLSDN+LT +P SL +K L L N + ++ N
Sbjct: 160 LQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKLDLSKNLLTSLPN 211
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPL-FIDMRSLTELNLSYNQL 39
L L L LSHNKL S SLP+ F + +L EL+LS N+L
Sbjct: 124 LKELGKLHLSHNKLTSLPDSLCQATALKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKL 183
Query: 40 TMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
T LP + L L N + ++ N F +L L LNL NK++ + G L +L
Sbjct: 184 TSLPESFGSLVQIKKLDLSKNLLTSLPNS-FDSLKSLINLNLSTNKLTVLPKGFGKLTSL 242
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
I + S N L ++K LFLG N I+ + ++ + + ++S
Sbjct: 243 EIFECSYN-LITTFTTFDDQTNIKQLFLGYNRIQKIEDNAFEKMQSLVS 290
>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 311
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+ +LP I +++L ELNL+ NQLT LP KNL L L +N+I
Sbjct: 51 VRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIK 108
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L +L+
Sbjct: 109 TIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQ 167
Query: 123 SLFLGGNPIKTVRNDILQ 140
L+L N + + N+I Q
Sbjct: 168 DLYLVSNQLTILPNEIGQ 185
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 117 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 175 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLK 233
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 234 NLQVLDLGSNQLTTLPEGIGQ 254
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 139 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 196
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L +L+L +N+++ + +G L
Sbjct: 197 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLK 256
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 257 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 299
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ L+L N+ + +G L NL L+L+ N+LT +P E+ L +LKSL L N IKT
Sbjct: 50 KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKT 109
Query: 134 VRNDI 138
+ +I
Sbjct: 110 IPKEI 114
>gi|348686389|gb|EGZ26204.1| hypothetical protein PHYSODRAFT_555679 [Phytophthora sojae]
Length = 785
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNK 60
L+ L TLDL N LV+ FI + S+ ++L N+L + P+ + +L L LGFN
Sbjct: 206 LTGLLTLDLKKNSLVTTG-DAFIGLVSIKFIDLRQNKLEVFPMLPENNSSLDQLFLGFNT 264
Query: 61 INNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L + + L++L++++NK+ +S + L L LD+++N+L D+P L L
Sbjct: 265 LREIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLK 324
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+L L + GNP+++VR I+
Sbjct: 325 YLDHLLVDGNPLRSVRRSII 344
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMR-------SLTELNLSYNQLTMLPVCTD-CKNLT 52
M+ L+ L + N L +D++ + SL EL+L N LT +P + +
Sbjct: 477 MIPSLERLRVGKNSLTTDAIDAMLVAGNNASICLSLKELDLRNNILTDIPQKLQYLETMD 536
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
LLL FN+I ++ + ++ +LS+L++ +N++ + + V + L L L +NEL +P
Sbjct: 537 TLLLSFNRIRALDRFPWSSMQQLSVLSISDNRLESLGA-VHQIPKLTSLSLENNELRQIP 595
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDILQDSKRII 146
EL+ +L++L+L GNP + +R IL + +
Sbjct: 596 AELALCENLRALYLAGNPQRGIRTHILNNGTEAV 629
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKIN 62
L+ LDLS+N + LP ++ ++ L + +N+L LP+ + + LT L L N++
Sbjct: 70 LRKLDLSYNDI--SELPTQVETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSNNELE 127
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L L+ NK++++ +G L +L +L + N+L +P + L +LK
Sbjct: 128 GCLPEQLGKLDKLRELGLEGNKLTKLPECIGGLSHLEVLKVESNQLRTLPSTIGQLRNLK 187
Query: 123 SL 124
+L
Sbjct: 188 TL 189
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 29 LTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L +L+LSYN ++ LP + K L + N++ ++ + L L+ L+L NN++
Sbjct: 70 LRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVW-NLETLTSLDLSNNELEG 128
Query: 88 -VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ +G L L L L N+LT +P + L HL+ L + N ++T+ + I Q
Sbjct: 129 CLPEQLGKLDKLRELGLEGNKLTKLPECIGGLSHLEVLKVESNQLRTLPSTIGQ 182
>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Oreochromis niloticus]
Length = 597
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 119/223 (53%), Gaps = 9/223 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+++K LD S N+L +P + +M +L +L L +N+L +LP L L +G N+
Sbjct: 216 LTNVKLLDCSDNQLTE--IPASLSEMLALEQLYLRHNKLRLLPKLP-APALKELYVGNNQ 272
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + L+ +SLL L+NNKI V + L L LDL++N++T +P LS L +
Sbjct: 273 IEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLPASLSLLPN 332
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQ-ESTSEINID 178
L L L GNP++ +R DIL + + ++ +++ R+ + DGG + S + +N+
Sbjct: 333 LNVLLLEGNPLRGIRRDILSKGTGELLKYLR-GRVKEEPEKTDGGDTAMMLPSQARVNVH 391
Query: 179 KYKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKL 221
K + + + +IPE ++ ++ + +N K +L
Sbjct: 392 DIKTLKLLAYSDKQAGSIPEELF--DAAADQSIATVNFSKNQL 432
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 28/157 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLG 57
+L L TLDL N+L SLP + ++++L +L LS+NQL LPV CT +NL L L
Sbjct: 100 LLPGLTTLDLHDNQL--SSLPSALGELQNLQQLRLSHNQLHSLPVEMCT-LENLRSLTLQ 156
Query: 58 FNKINNMENDY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDL 95
N + N+ D F L L +NL +N++S + ++ L
Sbjct: 157 QNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLSGLPDSLARL 216
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
N+ +LD SDN+LT++P LS + L+ L+L N ++
Sbjct: 217 TNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLR 253
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL---LLGFN 59
S L ++L N+L+S S P + LT ++L NQL+ LP ++ +NLT L +L +N
Sbjct: 444 SSLSEINLGFNRLISCS-PDICKLLQLTHIDLRNNQLSDLP--SEMQNLTKLRSIILIYN 500
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ + + + TL+ ++L L NN++ EV S + L +L+ LDL++N+L ++P EL
Sbjct: 501 RFKSFPDVLYETLSLETIL-LANNQVCEVDPSRLMKLTHLSTLDLANNDLLNIPPELGLC 559
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L GNP +T R I+ + SR+
Sbjct: 560 TTLRCLSLEGNPFRTPRAAIVAKGTDALMEYLRSRI 595
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
L ID + N+S+ TD LT LLL N+I + +D L L L+ L+L
Sbjct: 55 LNIDTPEEAQQNVSFGAADRWWEQTD---LTKLLLSSNQITLLSDDIRL-LPGLTTLDLH 110
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+N++S + S +G+L NL L LS N+L +P E+ +L +L+SL L N ++ + D+ Q
Sbjct: 111 DNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCTLENLRSLTLQQNLLENLPEDLGQ 169
>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
Length = 344
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L+ L+ L L+ N+L S +P I + SLTE LS N+L +P +LT L L N
Sbjct: 143 LTSLEVLGLTDNQLTS--VPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGN 200
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +N+++ V G L +L +L L DNELT VP E+ L
Sbjct: 201 QLTSVPAEIG-QLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLT 259
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LKSL+L GN + +V +I Q
Sbjct: 260 SLKSLYLYGNQLTSVPAEIGQ 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L LS N+L S +P I + SLTEL LS NQLT +P +L L L N
Sbjct: 166 LASLTESGLSGNRLAS--VPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L +L+L++N+++ V + VG L +L L L N+LT VP E+ L
Sbjct: 224 ELTSVPEETG-QLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLT 282
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L LFL N + +V +I Q
Sbjct: 283 LLTELFLDDNELTSVPAEIGQ 303
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L+ L L L+ N+L S +P I + SL L+LS NQLT LP L L L N
Sbjct: 51 LTSLVKLSLTENQLTS--VPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGN 108
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + LT L L L +N+++ V + +G L +L +L L+DN+LT VP E+ L
Sbjct: 109 QLTSVPAEIW-QLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLA 167
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L GN + +V +I
Sbjct: 168 SLTESGLSGNRLASVPAEI 186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+ +L ELN+S N LT+LPV +I LT L L+L N++
Sbjct: 28 LSALRELNVSRNALTLLPV---------------EIGQ--------LTSLVKLSLTENQL 64
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ V + +G L +L +LDLSDN+LT +P E+ L L+ L+L GN + +V +I Q
Sbjct: 65 TSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQ 119
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 28/178 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDLS N+L S LP I + +L EL L NQLT +P +L LLL N
Sbjct: 74 LASLRVLDLSDNQLTS--LPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDN 131
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAI------------------- 100
++ ++ + LT L +L L +N+++ V + +G L +L
Sbjct: 132 ELTSVPAEIG-QLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLA 190
Query: 101 ----LDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L LS N+LT VP E+ L L+ L+L N + +V + Q + ++ ++ + L
Sbjct: 191 SLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNEL 248
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGF 58
+L+ L L LS N+L S +P I + SL EL L N+LT +P T +L L L
Sbjct: 188 LLASLTELFLSGNQLTS--VPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRD 245
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L L N+++ V + +G L L L L DNELT VP E+ L
Sbjct: 246 NELTSVPAEVG-QLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQL 304
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L+L N + +V +I
Sbjct: 305 RSLEKLYLDDNKLTSVPAEI 324
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P + SL L+L N+LT +P +L L L N
Sbjct: 212 LTSLQELWLDDNELTS--VPEETGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGN 269
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT L+ L L +N+++ V + +G L +L L L DN+LT VP E+ L
Sbjct: 270 QLTSVPAEIG-QLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEIREL 327
>gi|428211272|ref|YP_007084416.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
acuminata PCC 6304]
gi|427999653|gb|AFY80496.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
acuminata PCC 6304]
Length = 922
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 6/152 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS+L LDLS N+L +LP I + LT L L +NQL+ LP NL L L N
Sbjct: 38 LSNLTVLDLSGNQL--SALPPEIGQLSHLTGLYLWHNQLSALPPEIGQLSNLIRLSLDRN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L+ L+ L+L +N++S + +G L +L LDL DN+L+ +P E+ L
Sbjct: 96 QLSALPLE-IGQLSNLTQLDLGDNQLSALPLEIGQLSHLTQLDLGDNQLSALPPEIGQLS 154
Query: 120 HLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+L +L L GNP+ + +I+ Q +K ++++++
Sbjct: 155 NLTTLELSGNPLTSPPPEIVEQGTKAVLAYLR 186
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K++ LNL ++++ +G L NL +LDLS N+L+ +P E+ L HL L+L N +
Sbjct: 17 KVTALNLLWKGLTKLPPEIGQLSNLTVLDLSGNQLSALPPEIGQLSHLTGLYLWHNQLSA 76
Query: 134 VRNDILQDSKRI 145
+ +I Q S I
Sbjct: 77 LPPEIGQLSNLI 88
>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
jacchus]
Length = 602
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 219 MKRLKHLDCNSN-LLETIPPELAAMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 278 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNL-HL 336
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ++S +E
Sbjct: 337 KFLALEGNPLRTIRREIINKGTQEV-------LKYLQSKIKDDGPSQRDSATE 382
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELANLQKLNISHNKLKILPEEITNLRNLKCLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN+++ V ++ L +L L+LS N+L +P E++ +
Sbjct: 161 NELICI-SEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRM 219
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 220 KRLKHLDCNSNLLETI 235
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN 66
++LS NKL S SL L + ++ LT L+L N L LP + L + L FN+ +
Sbjct: 454 VNLSFNKLSSISLELCM-LQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPE 512
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ T ++L + NN++ V ++ NL LDL +N+L +P EL + +L++L
Sbjct: 513 VLYRIFTLETIL-ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 571
Query: 126 LGGNPIKTVRNDIL 139
L GNP + R IL
Sbjct: 572 LDGNPFRVPRAAIL 585
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEI 147
>gi|194901384|ref|XP_001980232.1| GG17029 [Drosophila erecta]
gi|190651935|gb|EDV49190.1| GG17029 [Drosophila erecta]
Length = 873
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 27/186 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L L HN ++ LP F +L+EL+ S N + +P C NL HL
Sbjct: 390 LLRKLECLYLQHNDILE--LPEFEGNETLSELHASNNFIKTIPKAM-CSNLPHL------ 440
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 441 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 485
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + L + +GGG ++ I++ +
Sbjct: 486 LISLQVEGNPIKTIRRDILQCGTSRILKTLHERALAKAKE--EGGGADEASTSPGISVTR 543
Query: 180 YKLDRT 185
+ +T
Sbjct: 544 LRAGQT 549
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP I + L LN+SYN+ L P +D L L G N
Sbjct: 276 LEKLMRLNVSHNKL--SQLPREIYSLPELRHLNISYNEFNELNPDISDLHMLEFLDGGHN 333
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 334 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMQNDLTCLPEDMGLLR 392
Query: 120 HLKSLFLGGNPI 131
L+ L+L N I
Sbjct: 393 KLECLYLQHNDI 404
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
F + +L ELN++ N+ +P C + L G + EN + +LN+
Sbjct: 762 FGVLNTLRELNIANNRFQFIPNCV------YELQGLEILIASEN-------HIKMLNV-- 806
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QD 141
S + L L+ LDL +N++ VP L +L ++ L L GNP + R+ IL +
Sbjct: 807 -------SGLQSLPRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKG 859
Query: 142 SKRIISHIK 150
+ I+S+++
Sbjct: 860 TDAIMSYLR 868
>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
boliviensis boliviensis]
Length = 615
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP C L L +G N+I
Sbjct: 232 MKRLKHLDCNSN-LLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQI 290
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L +L HL
Sbjct: 291 EMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNL-HL 349
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
K L L GNP++T+R +I+ + + L Y + G S ++S +E
Sbjct: 350 KFLALEGNPLRTIRREIINKGTQEV-------LKYLRSKIKDDGPSQRDSATE 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 116 LLPALTVLDIHDNQLTS--LPSAIRELANLQKLNISHNKLKILPEEITNLRNLKCLYLQH 173
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + ++ F L+ L L+L NN+++ V ++ L +L L+LS N+L +P E++ +
Sbjct: 174 NELICI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRM 232
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++T+
Sbjct: 233 KRLKHLDCNSNLLETI 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + NL L + NK
Sbjct: 97 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNK 152
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N++ +S L NL LDLS+N LT VP SSL
Sbjct: 153 LKILPEE-ITNLRNLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSS 211
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K++ +I
Sbjct: 212 LVRLNLSSNQLKSLPAEI 229
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN 66
++LS NKL S SL L + ++ LT L+L N L LP + L + L FN+ +
Sbjct: 467 VNLSFNKLSSISLELCM-LQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPE 525
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ T ++L + NN++ + ++ NL LDL +N+L +P EL + +L++L
Sbjct: 526 VLYRIFTLETIL-ISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 584
Query: 126 LGGNPIKTVRNDIL 139
L GNP + R IL
Sbjct: 585 LDGNPFRVPRAAIL 598
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 49 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 108
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 109 SLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEI 160
>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
Length = 567
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L+TL L+ N L S DSL +RSL L+L +N+L+ +P V +LT L L F
Sbjct: 131 LTNLQTLALNENSLTSLPDSL---AHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRF 187
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D LT L++L+L+ NKI E+SS +G L+NL D+S N L +P E+ +
Sbjct: 188 NRIR-VVGDGIANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNC 246
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN 176
+L +L L N + + + I LQ RI L Y+ N +S+ + E N
Sbjct: 247 VNLSTLDLQHNELLDIPDTIGNLQALNRI-------GLRYNRLNAIPASLSNCKHMDEFN 299
Query: 177 IDKYKLDRTKTLTLCKV 193
++ + + LC +
Sbjct: 300 VEGNSISQLPDGLLCSL 316
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+ + +++L HN++ D +P +F ++LT+L + N LT LP+ N+ L LG
Sbjct: 340 FTSVSSINLEHNQI--DKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTWTNMVELNLGT 397
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D +L L +L L NN + + ++G+L L +LDL +N++ +P E+ L
Sbjct: 398 NQLVKLPDD-IQSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDLEENKIEILPNEIGFL 456
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L + N + ++ I
Sbjct: 457 QELKKLIVQSNQLTSLPRSI 476
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 23 FIDMR--SLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSL 77
FI R + L+LS + +T LP + ++LTHL+ L NK+ + + F LT L
Sbjct: 80 FIRCRDEGVKRLDLSKSSITSLP--PNVRDLTHLVEFYLYGNKLVALPAE-FGCLTNLQT 136
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L L N ++ + ++ L +L +LDL N+L+D+P + L L +LFL N I+ V +
Sbjct: 137 LALNENSLTSLPDSLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVVGDG 196
Query: 138 I 138
I
Sbjct: 197 I 197
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
Query: 19 SLPLFIDMRS-LTELNLSYNQLTMLP------------------------VCTDCKNLTH 53
SLPL I + + ELNL NQL LP + + L
Sbjct: 379 SLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKLRV 438
Query: 54 LLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
L L NKI + N+ L +L L +++N+++ + ++G LINL L + +N L +P
Sbjct: 439 LDLEENKIEILPNEIGF-LQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPE 497
Query: 114 ELSSLFHLKSLFLGGNP 130
E+ +L +L+SL+L NP
Sbjct: 498 EIGTLENLESLYLNDNP 514
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 52/185 (28%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKI 61
+L TLDL HN+L+ +P I ++++L + L YN+L +P ++CK++ + N I
Sbjct: 248 NLSTLDLQHNELLD--IPDTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSI 305
Query: 62 NNMENDYFLTLTKL------------------------SLLNLKNNKISEVSS------- 90
+ + + +LT+L S +NL++N+I ++
Sbjct: 306 SQLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSSINLEHNQIDKIPYGIFSRAK 365
Query: 91 -----------------NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
++G N+ L+L N+L +P ++ SL +L+ L L N +K
Sbjct: 366 NLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKR 425
Query: 134 VRNDI 138
+ I
Sbjct: 426 IPPSI 430
>gi|255070539|ref|XP_002507351.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
gi|226522626|gb|ACO68609.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
Length = 403
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+LS N+L S +P I + SLTE++L NQLT +P +L L LG N
Sbjct: 192 LGALRKLNLSRNQLTS--VPAEIGQLTSLTEVHLFSNQLTSVPAEIGQLTSLRQLHLGGN 249
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L+L N ++ V + +G L +L +L L N LT VP E+ L
Sbjct: 250 QLTSVPAEIG-QLTSLEWLSLNGNHLTSVPAEIGQLTSLRLLHLDGNRLTSVPAEIGQLT 308
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L GN + +V ++I Q + I+ ++ ++L
Sbjct: 309 SLEWLSLNGNHLTSVPSEIGQLTSLIVLYLNGNQL 343
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL L+L+ N LT +P +L L L N
Sbjct: 238 LTSLRQLHLGGNQLTS--VPAEIGQLTSLEWLSLNGNHLTSVPAEIGQLTSLRLLHLDGN 295
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT L L+L N ++ V S +G L +L +L L+ N+LT VP + L
Sbjct: 296 RLTSVPAEIG-QLTSLEWLSLNGNHLTSVPSEIGQLTSLIVLYLNGNQLTSVPAAIRDL 353
>gi|242067058|ref|XP_002454818.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
gi|241934649|gb|EES07794.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
Length = 586
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC----------------- 45
S L LDL NKLV S +F+ LTELNL+ N LT +P
Sbjct: 160 SKLSKLDLEGNKLVMLSENMFVSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKI 219
Query: 46 -------TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
C +L +G N ++++ D + L+KL +L+L +N++ E +L L
Sbjct: 220 TSIPPSIKGCSSLAEFYMGNNLLSSIPADIGM-LSKLGILDLHSNQLKEYPVGACNL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL + L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDE 337
Query: 159 QNVDGGGMSSQE----STSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+ G +++ + +++ +LD L+ V ++P + +
Sbjct: 338 EASGSGSTPTKDDQIAAARRLSLSSKELD----LSGLGVTSVPAAAW 380
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+ + L +D S+N +++ P L+EL S N ++ +P V C L+ L L N
Sbjct: 112 LATALVKVDFSNN-FLTELPPSLAKCPDLSELKASNNNISRIPDVLAGCSKLSKLDLEGN 170
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + F++ T L+ LNL N ++ + S++G L L LD+ N++T +P +
Sbjct: 171 KLVMLSENMFVSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITSIPPSIKGCS 230
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L ++G N + ++ DI
Sbjct: 231 SLAEFYMGNNLLSSIPADI 249
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 12 HNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP---VCTDCKNLTHLLLGFNKINNMENDY 68
+N LV S + + L L+LS N + LP + L L L K++ N
Sbjct: 439 NNPLVEISSTDLVPLSKLEVLDLSGNA-SALPEPSAVSALPQLHELYLRRMKLHEFPNG- 496
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FHLKSLFLG 127
L L +L +L+L N ++ V + + L LDLSDN +T +P EL L +L+ L L
Sbjct: 497 LLGLKQLRILDLSQNSLTTVPEGIKNFTALIELDLSDNNITALPAELGLLEANLQVLKLD 556
Query: 128 GNPIKTVRNDILQ-DSKRIISHIK 150
GNP++++R +L+ +K I+ ++K
Sbjct: 557 GNPLRSIRRTLLERGTKAILKYLK 580
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L+ L L+HN L L D+R SL LN+S+N ++ LP D L L + FN+
Sbjct: 47 LQKLILAHNNLEV----LREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQ 102
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + + L T L ++ NN ++E+ ++ +L+ L S+N ++ +P L+
Sbjct: 103 INTLPEEIGLA-TALVKVDFSNNFLTELPPSLAKCPDLSELKASNNNISRIPDVLAGCSK 161
Query: 121 LKSLFLGGN 129
L L L GN
Sbjct: 162 LSKLDLEGN 170
>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
bingchenggensis BCW-1]
Length = 370
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 50/200 (25%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ L LDLS N+LV +P + + +LTELNL +N+L LP + NL+HLLLG N
Sbjct: 169 LAALSELDLSGNRLVE--IPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSN 226
Query: 60 KINNMENDY-------------------------FLTLTKLSL----------------- 77
++ + + F LT ++L
Sbjct: 227 RLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTA 286
Query: 78 ---LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+L+ N+++E+ +++ L L LDL DNELTD+P + L L SL L GN
Sbjct: 287 LTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHA 346
Query: 135 RNDILQDSKRIISHIKTSRL 154
L D +R++ H+ R+
Sbjct: 347 PR-WLADHERLVVHLGEGRV 365
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ L L L NKL LP F+ ++ L L++ N+++ +P D L+ L L N
Sbjct: 123 LTELTDLALRDNKLTE--LPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGN 180
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + LT L+ LNL N+++E+ +++G+L NL+ L L N LT +P ELS L
Sbjct: 181 RLVEIPR-TLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLT 239
Query: 120 HLKSL 124
L+ L
Sbjct: 240 ALRWL 244
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 19 SLP----LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLT 73
SLP L + +LT L+LS T +P D LTHL L N++ + + L+
Sbjct: 43 SLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELP-ESLGNLS 101
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L+ L N+++++ V L L L L DN+LT++P L L L SL +G N I
Sbjct: 102 ALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISA 161
Query: 134 V 134
V
Sbjct: 162 V 162
>gi|195399814|ref|XP_002058514.1| GJ14282 [Drosophila virilis]
gi|194142074|gb|EDW58482.1| GJ14282 [Drosophila virilis]
Length = 750
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ LDL N L+ LP + + R L L + +N + LP + L L N I
Sbjct: 250 LQKLDLMKNDLIG--LPEDMGLLRKLQCLYIQHNDIKELPDFEGNEALNELHASNNFIER 307
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ D L L +L+L++NKI+++ V L NL LD+S+N ++ +P L+SL HL S
Sbjct: 308 VPKDLCANLPHLKILDLRDNKITQLPDEVCLLRNLNRLDVSNNSISVLPVTLASLAHLIS 367
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGG 165
L + GNPIKT+R DILQ + RI +KT + + + GG
Sbjct: 368 LQVDGNPIKTIRRDILQCGTARI---LKTLQDRAQAKGREDGG 407
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L+L HNKL + LF + L LN+S+N+ L P ++ L L G N
Sbjct: 155 LEKLVRLNLGHNKLSELPIELF-SLPELRHLNISHNEFIELNPDISNLHMLEFLDAGNNN 213
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN++ L +L+ L L NN I E+ ++ + +L LDL N+L +P ++ L
Sbjct: 214 INSLPGGIGF-LVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGLPEDMGLLRK 272
Query: 121 LKSLFLGGNPIKTV 134
L+ L++ N IK +
Sbjct: 273 LQCLYIQHNDIKEL 286
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E D + L L+L +N +S +S + +L+ L +L L DN L +P E+ L L L
Sbjct: 102 EEDAWWNQVPLENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRL 161
Query: 125 FLGGN 129
LG N
Sbjct: 162 NLGHN 166
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 8 LDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGFNKINNME 65
L L+HN V S+P FI +T LNLS N + LP N L L + N+ +
Sbjct: 602 LVLAHN--VIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYLP 659
Query: 66 NDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L +L +N I ++ + + L L LDL +N++ VP L +L ++ L
Sbjct: 660 KGLY-ELQGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDIEYVPPILGNLTNITHL 718
Query: 125 FLGGNPIKTVRNDIL-QDSKRIISHIK 150
L GNP + R+ IL + + I+S+++
Sbjct: 719 ELVGNPFRQPRHQILMKGTDAIMSYLR 745
>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
200802841]
gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
200802841]
Length = 364
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L +N+LT +P E+ L
Sbjct: 126 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+LKSL LG N + T+ N+I Q K ++ T+RL
Sbjct: 185 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRL 219
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L+HN+ ++P I +++L LNL NQLT LP +NL L LG
Sbjct: 136 QLKNLRVLKLTHNQF--KTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 193
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L KL L L N+++ + + +G L NL L L N+LT +P E+ L
Sbjct: 194 NRLTTLPNEIG-QLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQL 252
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L++L+L N + T+ DI Q
Sbjct: 253 KNLQTLYLRSNRLTTLSKDIEQ 274
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +LK+LDL N+L + LP I ++ L +L LS N+LT LP +NL L LG
Sbjct: 182 QLQNLKSLDLGSNRLTT--LPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGS 239
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 240 NQLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQL 298
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 299 KNLQVLDLGSNQLTTLPKEIGQ 320
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L N+L + LP I +++L L L++NQ +P KNL L LG N
Sbjct: 114 LENLKELSLGSNRLTT--LPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L+L +N+++ + + +G L L L LS N LT +P E+ L
Sbjct: 172 QLTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 231 NLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 273
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L+ L LS N+L + LP I +++L EL L NQLT+LP KNL L L
Sbjct: 205 QLQKLQDLYLSTNRLTT--LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRS 262
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 263 NRLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQL 321
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L N + T+ +I Q
Sbjct: 322 KNLQVFELNNNQLTTLPKEIGQ 343
>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
caballus]
Length = 803
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P M SL L L N+L LP CK L L +G N+I
Sbjct: 420 MKRLKHLDCNSN-LLETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQI 478
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L L HL
Sbjct: 479 EMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HL 537
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 538 KFLALEGNPLRTIRREIINKGTQEVLKYLQS 568
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 304 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 361
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L L L+L NN+++ V ++ L +L L+LS N+L +P E+S +
Sbjct: 362 NELTCLP-EGFEQLFSLEDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSLPAEISGM 420
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++T+ ++
Sbjct: 421 KRLKHLDCNSNLLETIPPEL 440
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 31/142 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLP-VCTDCKNLTHLLLG 57
L L LDL +N L +SLP +M SL L NLS+N+ +LP V L +L+
Sbjct: 672 LQKLTFLDLRNNFL--NSLP--EEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILIS 727
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ +++ T+ NL LDL +N+L +P EL +
Sbjct: 728 NNQVGSVDPQKMKTME-----------------------NLITLDLQNNDLLQIPPELGN 764
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
+L++L L GNP + R IL
Sbjct: 765 CVNLRTLLLDGNPFRVPRAAIL 786
>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 374
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 66 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L +N+LT +P E+ L
Sbjct: 124 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 182
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+LKSL LG N + T+ N+I Q K ++ T+RL
Sbjct: 183 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRL 217
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +LK+LDL N+L + LP I ++ L +L LS N+LT LP +NL L LG
Sbjct: 180 QLQNLKSLDLGSNRLTT--LPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGS 237
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 238 NQLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQL 296
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 297 KNLQVLDLGSNQLTTLPEEIEQ 318
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L N+L + LP I +++L L L++NQ +P KNL L LG N
Sbjct: 112 LENLKELSLGSNRLTT--LPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L+L +N+++ + + +G L L L LS N LT +P E+ L
Sbjct: 170 QLTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 228
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 229 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 271
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L+ L LS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 203 QLQKLQDLYLSTNRLTT--LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRS 260
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 261 NRLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQL 319
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 320 KNLQVLDLGSNQLTTLPEGIGQ 341
>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 95/166 (57%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+LVS +P I +++L +L L +NQ+T+LP +NL L L N
Sbjct: 201 LKNLQKLNLSENQLVS--IPKEILQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLSEN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L L L+LKNN++S + +G L NL L+L +N+LT++P E+ L
Sbjct: 259 QFTSLPKEID-KLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK 317
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
+L+ L L NP+ + ++ ++++ + +D+ +GGG
Sbjct: 318 NLQRLELDSNPLSS------KEKEKVVKLLPKCEIDF-----EGGG 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L LK LDL N+L++ + + +++L +LNLS N+L +P KNL L L N+
Sbjct: 109 LKSLKNLDLFRNQLMTVPKEVML-LQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQ 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + L +L L L+NN+ V L NL L+LS+N+L +P E+ L +
Sbjct: 168 IVSLPKE-IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQN 226
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N I + ++LQ
Sbjct: 227 LRDLVLDHNQITILPTEVLQ 246
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+L L+ L+LS N+L +++P I +++L L L +NQ+ LP + + L L+L
Sbjct: 131 LLQTLEKLNLSLNRL--NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILEN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ N+ + L L L LNL N++ + + L NL L L N++T +P E+ L
Sbjct: 189 NRFKNVPGEA-LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQL 247
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ +I
Sbjct: 248 QNLQELYLSENQFTSLPKEI 267
>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 376
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L +N+LT +P E+ L
Sbjct: 126 RLTTLPNEIG-QLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+LKSL LG N + T+ N+I Q K ++ T+RL
Sbjct: 185 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRL 219
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L+ L LS N+L + LP I +++L EL L NQLT+LP KNL L L
Sbjct: 205 QLQKLQDLYLSTNRLTT--LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRS 262
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 263 NRLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQL 321
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 322 KNLQVLDLGSNQLTTIPKEIGQ 343
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L N+L + LP I +++L L L++NQ +P KNL L LG N
Sbjct: 114 LENLKELSLGSNRLTT--LPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L+L +N+++ + + +G L L L LS N LT +P E+ L
Sbjct: 172 QLTALPNEIG-QLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 231 NLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 273
>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
Length = 574
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL ELNL NQLT +P +L L L N
Sbjct: 143 LTSLERLYLGGNQLTS--VPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGN 200
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L+L N+++ V +++G L +L L L DN+LT VP E+ L
Sbjct: 201 QLTSVPAEIG-QLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLA 259
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L++GGN + +V +I Q
Sbjct: 260 SLEKLYVGGNQLTSVPAEIGQ 280
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L +N+L S +P I + SL EL L N+LT +P +L L LG N
Sbjct: 97 LTSLRELHLWNNRLTS--VPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERLYLGGN 154
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L LNLK+N+++ V + +G L +L L+L+ N+LT VP E+ L
Sbjct: 155 QLTSVPAEIG-RLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLT 213
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L L GN + +V DI Q
Sbjct: 214 SLKELDLNGNQLTSVPADIGQ 234
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N L D LP I + SL EL L N+LT +P +LT L LG N
Sbjct: 373 LTSLRVLYLDDNLL--DELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCN 430
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L K++ V + +G L +L +L L N+LT +P E+ L
Sbjct: 431 QLTSVPAEIG-QLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLA 489
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L G + +V +I Q
Sbjct: 490 SLRELYLNGKQLTSVPAEIGQ 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGF- 58
L+ L+ L L N+L S +P I + SLTEL LS NQLT +P + LT L LG
Sbjct: 304 LTSLRVLYLDDNQLTS--VPAEIGQLTSLTELYLSGNQLTSVPA--EIGRLTELKELGLR 359
Query: 59 -NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ ++ + + LT L +L L +N + E+ + +G L +L L L NELT VP E+
Sbjct: 360 DNQLTSVPEEIW-QLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQ 418
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L L L+LG N + +V +I Q
Sbjct: 419 LTSLTELYLGCNQLTSVPAEIGQ 441
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S +P I + SL +L + NQLT +P +L L L N
Sbjct: 235 LTDLKELGLRDNQLTS--VPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDN 292
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + LT L +L L +N+++ V + +G L +L L LS N+LT VP E+ L
Sbjct: 293 QLTSVPAEIW-QLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLT 351
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L L N + +V +I Q
Sbjct: 352 ELKELGLRDNQLTSVPEEIWQ 372
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ L L N+L S ++ + SLTEL L NQLT +P +LT L L K
Sbjct: 396 LTSLEELGLERNELTSVPAEIW-QLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTK 454
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT L +L L N+++ + + +G L +L L L+ +LT VP E+ L
Sbjct: 455 LTSVPAEIG-QLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTE 513
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L L N + +V +I Q
Sbjct: 514 LKELDLRDNKLTSVPEEIWQ 533
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 68/138 (49%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L L L N+L S +P I + SLT L+LS NQLT +P
Sbjct: 51 LTSLTELYLFGNQLTS--VPAEIGQLTSLTGLDLSGNQLTSVPAEVG------------- 95
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
LT L L+L NN+++ V + +G L +L L L DN LT VP E+ L
Sbjct: 96 ----------QLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTS 145
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+LGGN + +V +I
Sbjct: 146 LERLYLGGNQLTSVPAEI 163
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
MEN + L L L N+++ V + +G L +L +LDL +N+LT VP E+ L L
Sbjct: 1 MENGRVVRLE----LALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTE 56
Query: 124 LFLGGNPIKTVRNDILQ 140
L+L GN + +V +I Q
Sbjct: 57 LYLFGNQLTSVPAEIGQ 73
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 31 ELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
EL L N+LT +P +L L L N++ ++ + LT L+ L L N+++ V
Sbjct: 10 ELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIG-QLTSLTELYLFGNQLTSVP 68
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ +G L +L LDLS N+LT VP E+ L L+ L L N + +V +I Q
Sbjct: 69 AEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQ 119
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L +L+L NN+++ V + +G L +L L L N+LT VP E+ L L L L GN +
Sbjct: 28 LTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQL 87
Query: 132 KTVRNDILQDSKRIISHIKTSRL 154
+V ++ Q + H+ +RL
Sbjct: 88 TSVPAEVGQLTSLRELHLWNNRL 110
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L LS KL S +P I + SL L L NQLT LP +L L L
Sbjct: 442 LTSLTKLYLSGTKLTS--VPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGK 499
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT+L L+L++NK++ V + L +L +L L DN+LT VP + L
Sbjct: 500 QLTSVPAEIG-QLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIREL 557
>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 989
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
LS+L+ LDLS NKL SLP + + +L L+L YNQL+ LPV NL L L
Sbjct: 212 QLSNLQNLDLSFNKL--SSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTS 269
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++N++ + F LT L LNL +NK+S + +G L +L L+LS N+L+ +P E+ L
Sbjct: 270 NQLNSLLIEIF-QLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQL 328
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
L+SL L N + + +I + H+K LD + + ++ S +N
Sbjct: 329 TCLQSLNLRNNQLNRLPTEI----GHLHLHLKVLTLDNNPLKFLPAEIRNRHSQRILNFY 384
Query: 179 KYKLDRT-KTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKL 221
K +L++T L K++ I E G +I ++YKL
Sbjct: 385 KQQLEQTIDRLYEAKLLIIGEG----GAGKTSLAKKIEDEEYKL 424
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHN-KLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
LS+L++LDLS+N KL+ LP + + +L L L N+L+ LP NL +L L +
Sbjct: 120 LSNLQSLDLSYNNKLIG--LPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRY 177
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + L+ L L+L +NK+S + + + L NL LDLS N+L+ +P E+ L
Sbjct: 178 NQLSSLPAE-IAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQL 236
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + + +I+Q
Sbjct: 237 SNLQNLDLRYNQLSNLPVEIVQ 258
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ L + N+L D+LP + + +L L+L NQL+ LP NL L L +
Sbjct: 73 WLAQLEELQIIRNQL--DNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSY 130
Query: 59 N-KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N K+ + + + L+ L L L+ NK+S + + V L NL LDL N+L+ +P E++
Sbjct: 131 NNKLIGLPAE-IVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSSLPAEIAQ 189
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L++L L N + ++ +I Q
Sbjct: 190 LSNLQNLDLWHNKLSSLPAEIAQ 212
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 31 ELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
EL+LS LT LP L L+LG +K + + +++ NK+SE+
Sbjct: 20 ELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYD-----------QGYIIDTIGNKLSELP 68
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+G L L L + N+L ++P E+ L +L+SL L N + ++ +I
Sbjct: 69 KEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEI 117
>gi|148909879|gb|ABR18026.1| unknown [Picea sitchensis]
Length = 524
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV--CTDCKNLTHLLLG 57
+L LK L++S NKL SLP I M L EL+ SYNQLT LP NL LL+
Sbjct: 281 LLKRLKFLNISGNKL--KSLPDSISMCSELIELDASYNQLTYLPTNFGYQLANLQKLLVQ 338
Query: 58 FNKINNMEND------------YFLTLTKL--SLLNLKNNKISEVSSN----------VG 93
NK+ ++ + +F L L +L +LKN ++ SSN +G
Sbjct: 339 LNKLRSLPSSVCELKSLRYLDVHFNELRSLPEALGDLKNLEVLNASSNFSDLVSLPDSIG 398
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI-LQDSKRIISHIKTS 152
+L NL LD+S+N++ ++P SL +LK L L NP+ T N+I +Q + + H+
Sbjct: 399 ELTNLVELDVSNNQIKELPYSFGSLQNLKKLNLDQNPLMTPPNEIVVQGVEAVKEHMAKR 458
Query: 153 RLDY 156
LDY
Sbjct: 459 WLDY 462
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 48 CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNE 107
+NL H GF KI T L L+NL NKI V+ ++ L+NL LDLS N
Sbjct: 223 SRNLKHFPEGFCKI-----------TTLVLVNLSRNKIQAVTDSIAGLVNLETLDLSGNV 271
Query: 108 LTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +P + L LK L + GN +K++ + I
Sbjct: 272 LVSLPDSIGLLKRLKFLNISGNKLKSLPDSI 302
>gi|355779520|gb|EHH63996.1| Malignant fibrous histiocytoma-amplified sequence with leucine-rich
tandem repeats 1, partial [Macaca fascicularis]
Length = 944
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
HL LD+SHN+L + + +R L +LNLS+NQL LP L L + FN++
Sbjct: 4 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLT 63
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ D L++L L++ +N+++ + L+ L LD+S N L +P ++S+L LK
Sbjct: 64 HLP-DSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALK 122
Query: 123 SLFLGGNPIKTV 134
L+L G + T+
Sbjct: 123 ILWLSGAELGTL 134
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-----VCT------DCKN 50
LS L+TLD+ HN+L + L + + +L EL++S N+L LP +C
Sbjct: 72 LSRLRTLDVDHNQLTAFPRQL-LQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAE 130
Query: 51 LTHLLLGFNKINNMEN------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
L L GF ++ ++E+ F L +L +LNL +N + E + + L L
Sbjct: 131 LGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGL 190
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LS N+LT VP +S L L +L+L N I+ + + I++
Sbjct: 191 EELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVE 232
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L LK L+LS N L+ + + + L EL LS NQLT +P + + L L L N+
Sbjct: 164 LQRLKMLNLSSN-LLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNR 222
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
I + D + LT L L L+ N+I+ + N G L + + + DN L P E+
Sbjct: 223 IRYLP-DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 276
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+LT L + N++ + + L +L LNL +N++ + + +G L L LD+S N LT
Sbjct: 4 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLT 63
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+P LS L L++L + N + +LQ
Sbjct: 64 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQ 94
>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
familiaris]
Length = 631
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD + N L+ P +M SL L L N+L LP C+ L L +G N+I
Sbjct: 248 MKRLKHLDCNSN-LLETVPPELANMESLELLYLRRNKLRFLPEFPSCRLLKELHVGENQI 306
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ L + +L+L++NK+ V + L +L LDLS+N+++ +PC L L L
Sbjct: 307 EILGPEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-PL 365
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 366 KFLALEGNPLRTIRREIINKGTQEVLKYLRS 396
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 132 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQH 189
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L L L++ NN+++ V ++ L +L L++S N+L +P E+S +
Sbjct: 190 NELTRIP-EGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVEISGM 248
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N ++TV
Sbjct: 249 KRLKHLDCNSNLLETV 264
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ +LP
Sbjct: 499 MLQKLTFLDLRNNFL--NSLP--EEMESLIRLQTINLSFNRFKILP-------------- 540
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELS 116
D + L + + NN++ V + + NL LDL +N+L +P EL
Sbjct: 541 ---------DVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELG 591
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 592 NCVNLRTLLLDGNPFRVPRAAIL 614
>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
Length = 1260
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDLS N+L +LP + ++SLT L+L NQL+ LP V ++LT L L
Sbjct: 482 QLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSS 539
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ L L++N++S + +G L +L LDLSDN+L+++P ++ L
Sbjct: 540 NQLSTLP-EVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQL 598
Query: 119 FHLKSLFLGGN 129
L SLFLGGN
Sbjct: 599 DTLCSLFLGGN 609
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDLS N+L +LP + ++SLT LNL NQL+ LP V ++LT L L
Sbjct: 298 QLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSS 355
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ LNL +N++S + VG L +L LDLS N+L+ +P + L
Sbjct: 356 NQLSTLP-EAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQL 414
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L SL+L N + T+ + Q
Sbjct: 415 QSLTSLYLRSNQLSTLPEAVGQ 436
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L +L+L N+L +LP + ++SLT L+LS NQL+ LP V ++LT L L FN+++
Sbjct: 164 LTSLNLRSNQL--STLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLS 221
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L+ LNL +N++S + VG L +L LDLS N+L+ +P + L L
Sbjct: 222 TLP-EVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLT 280
Query: 123 SLFLGGNPIKTVRNDILQ 140
SL+L N + T+ + Q
Sbjct: 281 SLYLRSNQLSTLPEAVGQ 298
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDLS N+L +LP + ++SLT LNL NQL+ LP ++LT L L
Sbjct: 436 QLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSS 493
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ L+L++N++S + VG L +L LDLS N+L+ +P + L
Sbjct: 494 NQLSTLP-EVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQL 552
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L SL+L N + T+ I Q
Sbjct: 553 QSLTSLYLRSNQLSTLPEVIGQ 574
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDLS N+L +LP + ++SLT LNLS NQL+ LP V ++LT L L
Sbjct: 206 QLQSLTSLDLSFNQL--STLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSS 263
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ L L++N++S + VG L +L LDLS N+L+ +P + L
Sbjct: 264 NQLSTLP-EVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQL 322
Query: 119 FHLKSLFLGGNPIKTV 134
L SL L N + T+
Sbjct: 323 QSLTSLNLRSNQLSTL 338
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDL N+L +LP + ++SLT L+LS NQL+ LP V ++LT L L
Sbjct: 505 QLQSLTSLDLRSNQL--STLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRS 562
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ L+L +N++SE+ + L L L L N L +P ELS L
Sbjct: 563 NQLSTLP-EVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRL 621
Query: 119 FHLKSLFLG 127
HL+ L LG
Sbjct: 622 LHLEKLSLG 630
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +LDLS N+L +LP + ++SLT L L NQL+ LP ++LT L L
Sbjct: 390 QLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSS 447
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ LNL++N++S + VG L +L LDLS N+L+ +P + L
Sbjct: 448 NQLSTLP-EVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQL 506
Query: 119 FHLKSLFLGGNPIKTV 134
L SL L N + T+
Sbjct: 507 QSLTSLDLRSNQLSTL 522
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L +L L N+L +LP + ++SLT L+LS NQL+ LP ++LT L L N
Sbjct: 115 QLQSLTSLYLRSNQL--STLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L+ L+L +N++S + VG L +L LDLS N+L+ +P + L
Sbjct: 173 QLSTLP-EVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQ 231
Query: 120 HLKSLFLGGNPIKTV 134
L SL L N + T+
Sbjct: 232 SLTSLNLSSNQLSTL 246
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L L +L L N+L +LP + ++SLT L+LS NQL+ LP V ++LT L L
Sbjct: 413 QLQSLTSLYLRSNQL--STLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRS 470
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + L L+ L+L +N++S + VG L +L LDL N+L+ +P + L
Sbjct: 471 NQLSTLP-EAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQL 529
Query: 119 FHLKSLFLGGNPIKTV 134
L SL L N + T+
Sbjct: 530 QSLTSLDLSSNQLSTL 545
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 25/156 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L++L L++N+ + +P + +R L LNLS NQL+ LP V ++LT L L N
Sbjct: 70 LTELRSLFLAYNQF--EEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSN 127
Query: 60 KINNMEN--DYFLTLTKLSL-------------------LNLKNNKISEVSSNVGDLINL 98
+++ + +LT L L LNL++N++S + VG L +L
Sbjct: 128 QLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQLQSL 187
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
LDLS N+L+ +P + L L SL L N + T+
Sbjct: 188 TSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTL 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 27/155 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
L L +L L N+L +LP I ++SLT L+LS NQL+ LP +C L L LG
Sbjct: 551 QLQSLTSLYLRSNQL--STLPEVIGQLQSLTSLDLSDNQLSELPRQIC-QLDTLCSLFLG 607
Query: 58 FNKINNM--ENDYFLTLTKLSL-------------------LNLKNNKISEVSSNVGDLI 96
N + + E L L KLSL + + NK++ +S + L
Sbjct: 608 GNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLP 667
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
+L +LDLS N+L+ V ++ SL LK + L GNP+
Sbjct: 668 SLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPL 702
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTD 110
L L L +N+ + + L KL LNL +N++S + VG L +L L L N+L+
Sbjct: 73 LRSLFLAYNQFEEIP-EVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLST 131
Query: 111 VPCELSSLFHLKSLFLGGNPIKTVRNDILQDS 142
+P + L L SL L N + T+ + Q S
Sbjct: 132 LPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQS 163
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 43 PVCTDCKNLTHLLLGF------NKINNMEN--DYFLTLTKLSLLNLKNNKISEVSSNVGD 94
P L L+LG + NN++ D LT+L L L N+ E+ VG
Sbjct: 33 PEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGR 92
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L L+LS N+L+ +P + L L SL+L N + T+
Sbjct: 93 LRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTL 132
>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
Length = 1183
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LS+L+ L L+ N++ + DSL + SL +L+L+ NQ++ +P KNL L LG
Sbjct: 231 LSNLQRLQLNFNRIKKIPDSL---AKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGS 287
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D F L L LNL +N+I ++ + G L +L L+LS N++ ++P ++L
Sbjct: 288 NQIKKIP-DSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATL 346
Query: 119 FHLKSLFLGGNPIKTV 134
+L+ L+L NPIK V
Sbjct: 347 VNLQQLYLYNNPIKEV 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ LDL N++ + DS F + SL +LNL NQ+ +P +L L L
Sbjct: 277 LKNLQKLDLGSNQIKKIPDS---FGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSH 333
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NKI + D F TL L L L NN I EV ++ L+NL L S N++ ++P L++L
Sbjct: 334 NKIEEIP-DSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATL 392
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
+L+ L + N IK + DS ++H++
Sbjct: 393 VNLQQLDISSNQIKEIP-----DSLAALTHLQ 419
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L+ L+ L+L N++ + DS F + SL +LNLS+N++ +P NL L L
Sbjct: 300 LASLQQLNLGSNQIKKIPDS---FGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYN 356
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I + D TL L L +N+I E+ ++ L+NL LD+S N++ ++P L++L
Sbjct: 357 NPIKEVP-DSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAAL 415
Query: 119 FHLKSLFLGGNPIKTV 134
HL++L L I +
Sbjct: 416 THLQNLGLSSTQITEI 431
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P ++ L L N L +PV T L L L FN+I + + L L L+
Sbjct: 63 PETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIP-ESLSALINLQQLD 121
Query: 80 L-KNNKISEVSSNVGDLINLAILDLSDN-ELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L N++I E+ ++ LINL LDLS N ++ ++P L++L +L+ L LGGNPIK +
Sbjct: 122 LSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEI 178
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L+ L+ L+LSHNK+ + DS F + +L +L L N + +P NL L
Sbjct: 323 LASLQQLNLSHNKIEEIPDS---FATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSS 379
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D TL L L++ +N+I E+ ++ L +L L LS ++T++P LS+L
Sbjct: 380 NQIKEIP-DSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTL 438
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N IK + + ++
Sbjct: 439 VNLQQLNLSFNQIKKIPDSFVK 460
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 2 LSHLKTLDLSHN---KLVSDSLPLFIDMRSLTELNLSYN-QLTMLP-VCTDCKNLTHLLL 56
L +L+ LDLS N K + DSL I+++ +L+LS N Q+ +P NL L L
Sbjct: 114 LINLQQLDLSANHQIKEIPDSLSALINLQ---QLDLSANHQIKEIPDSLAALVNLQQLQL 170
Query: 57 GFNKINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
G N I + Y LT L L L+L + I E+ ++ L+NL L L +N++ ++P L
Sbjct: 171 GGNPIKEI--PYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSL 228
Query: 116 SSLFHLKSLFLGGNPIKTV 134
++L +L+ L L N IK +
Sbjct: 229 AALSNLQRLQLNFNRIKKI 247
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGF 58
L +L+ L S N++ + DSL ++++ +L++S NQ+ +P LTHL LG
Sbjct: 369 LVNLQQLGFSSNQIKEIPDSLATLVNLQ---QLDISSNQIKEIP--DSLAALTHLQNLGL 423
Query: 59 NKINNME-NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+ E D+ TL L LNL N+I ++ + L +L L L N++T +P L +
Sbjct: 424 SSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLEN 483
Query: 118 LFHLKSLFLGGNPI 131
L L+ L L NPI
Sbjct: 484 LPALQKLDLRLNPI 497
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 2 LSHLKTLDLSHN---KLVSDSLPLFIDMR--------------------SLTELNLSYNQ 38
L +L+ LDLS N K + DSL ++++ SL +L+L+
Sbjct: 138 LINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTG 197
Query: 39 LTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ +P NL L L N+I + D L+ L L L N+I ++ ++ L +
Sbjct: 198 IKEIPDSLAALVNLQQLYLYNNQIKEIP-DSLAALSNLQRLQLNFNRIKKIPDSLAKLAS 256
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L LDL+ N+++++P ++L +L+ L LG N IK +
Sbjct: 257 LQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKI 293
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYN-QLTMLP-VCTDCKNLTHLLLGFNK 60
LK L+LS N++ + +SL I+++ +L+LS N Q+ +P + NL L L N
Sbjct: 94 LKQLNLSFNQIKEIPESLSALINLQ---QLDLSANHQIKEIPDSLSALINLQQLDLSANH 150
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
D L L L L N I E+ + L++L L L+D + ++P L++L +
Sbjct: 151 QIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVN 210
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L+ L+L N IK + DS +S+++ +L+++
Sbjct: 211 LQQLYLYNNQIKEIP-----DSLAALSNLQRLQLNFN 242
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ LD+S N++ + DSL +++L LS Q+T +P + NL L L F
Sbjct: 392 LVNLQQLDISSNQIKEIPDSLAALTHLQNL---GLSSTQITEIPDFLSTLVNLQQLNLSF 448
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N+I + D F+ L L L L +N+I+++ S + +L L LDL N + P L S
Sbjct: 449 NQIKKIP-DSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSPEILGS 506
>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Loxodonta africana]
Length = 602
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD + N L +++P M SL L L N+L LP C+ L L +G N+
Sbjct: 219 MKKLKHLDCNSNLL--ETIPSELAGMESLELLYLRRNKLHSLPQFPSCRLLKELHVGENQ 276
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L + +L L++NK+ V + L +L LDLS+N+++ +P L +L H
Sbjct: 277 IEMLGAEHLKHLNSILVLELRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL-H 335
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
LK L L GNP++T+R +I+ + ++ ++ ++++ D D ++ SE ++
Sbjct: 336 LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTLPSESRVNV 395
Query: 180 YKLDRTKTLTLC--KVINIPESVY 201
+ + KTL + +IP+ V+
Sbjct: 396 HAITTLKTLDYSDKQKTSIPDEVF 419
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 160
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L+ L L+L +N+++ V + L +L L+LS N+L +P E+S +
Sbjct: 161 NELTCIP-EGFEQLSSLEDLDLSSNRLTTVPVSFSALSSLVRLNLSSNQLKSLPAEISRM 219
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++T+ +++
Sbjct: 220 KKLKHLDCNSNLLETIPSEL 239
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ +LP
Sbjct: 470 MLQKLTFLDLRNNFL--NSLP--EEMESLIRLQMINLSFNRFKILP-------------- 511
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ + L + + NN++ V ++ NL LDL +N+L +P EL
Sbjct: 512 ---------EVLYRIPTLETVLISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELG 562
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 563 NCVNLRTLLLDGNPFRVPRAAIL 585
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
R +LNLS L+ +P C N+ ++ + + T L+ L + NNK+
Sbjct: 36 RKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQ 95
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ ++ L L +LD+ DN+LT +P + L +L+ L + N +K + +I
Sbjct: 96 SITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEI 147
>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
Length = 426
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFI-DMRSLTELNLSYNQL 39
LS L+ L LS N+L S S+P I + SL L L +NQL
Sbjct: 212 LSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQL 271
Query: 40 TMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
T LP L LLL N++ ++ + LT L+ L+L +N+++ V + +G L +L
Sbjct: 272 TSLPAEIGQLTALRVLLLYGNQLTSVPAEIG-QLTSLTELHLADNQLTSVPAEIGQLTSL 330
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L DN+LT VP E+ L L+ L+LGGN + +V +I Q
Sbjct: 331 ERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQ 372
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ L L HN+L S LP I + +L L L NQLT +P +LT L L
Sbjct: 257 QLTSLEGLWLRHNQLTS--LPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLAD 314
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L L++N+++ V + +G L +L L L N LT VP E+ L
Sbjct: 315 NQLTSVPAEIG-QLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQL 373
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
LK L L GN + +V +I Q
Sbjct: 374 TELKELNLEGNQLTSVPAEIGQ 395
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+ L L N+L S +P I + SLTEL+L+ NQLT +P +L L L
Sbjct: 280 QLTALRVLLLYGNQLTS--VPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGLRD 337
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L L N+++ V + +G L L L+L N+LT VP E+ L
Sbjct: 338 NQLTSVPAEIG-QLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQL 396
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L+LG N + +V
Sbjct: 397 TSLERLYLGHNQLTSV 412
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L L L+ N+L S +P I + SL L L NQLT +P +L L LG
Sbjct: 303 QLTSLTELHLADNQLTS--VPAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGG 360
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
N++ ++ + LT+L LNL+ N+++ V + +G L +L L L N+LT VP
Sbjct: 361 NRLTSVPAEIG-QLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLTSVPA 414
>gi|124009768|ref|ZP_01694438.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123984273|gb|EAY24622.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 264
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HLK L+L+ N L LP I +R L EL L+ QLT LP +NL L LG N
Sbjct: 117 LKHLKQLNLNKNPLTQ--LPKEIGRLRQLEELWLTQGQLTRLPKEIGKLENLRKLHLGGN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L +L L+L+ NK+ + + +G L NL LDL N+L +P + L
Sbjct: 175 QLKQVPAE-LGNLEELDTLDLRENKLLMLPNEIGYLTNLRSLDLRRNQLHSLPVNIGDLV 233
Query: 120 HLKSLFLGGNPIKTVRNDILQDS 142
LK L+L GNP+ D +Q +
Sbjct: 234 QLKELYLYGNPLPISEKDRIQKA 256
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+L L LNL N ++++ +G L L L L+ +LT +P E+ L +L+ L LGGN
Sbjct: 116 SLKHLKQLNLNKNPLTQLPKEIGRLRQLEELWLTQGQLTRLPKEIGKLENLRKLHLGGNQ 175
Query: 131 IKTVRNDI 138
+K V ++
Sbjct: 176 LKQVPAEL 183
>gi|242012419|ref|XP_002426930.1| Ras suppressor protein, putative [Pediculus humanus corporis]
gi|212511159|gb|EEB14192.1| Ras suppressor protein, putative [Pediculus humanus corporis]
Length = 350
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L TL +N+L SLP +F D+ L ELNLS N P + K++ +L +G N
Sbjct: 89 LCPLTTLIAKNNRLSDKSLPPVFTDLTDLKELNLSGNDFANFPPEILNLKSIRYLYMGGN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NK+++V S +G L L L LSDN+L +P E++ L
Sbjct: 149 NLSKIPKE-ISKLQSLQVLSLGGNKLTDVPSTLGQLKKLTALILSDNQLESLPREIAKLT 207
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N +KT+ +I+
Sbjct: 208 ELKSLLLHKNKLKTLPTEIV 227
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 18 DSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNME-NDYFLTLTKL 75
D++P I L L++S N L+ LP LT L+ N++++ F LT L
Sbjct: 58 DAVPGVIGRFGRLKYLDISSNGLSRLPPEIGLCPLTTLIAKNNRLSDKSLPPVFTDLTDL 117
Query: 76 SLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
LNL N + + +L ++ L + N L+ +P E+S L L+ L LGGN + V
Sbjct: 118 KELNLSGNDFANFPPEILNLKSIRYLYMGGNNLSKIPKEISKLQSLQVLSLGGNKLTDVP 177
Query: 136 NDILQ 140
+ + Q
Sbjct: 178 STLGQ 182
>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
[Ornithorhynchus anatinus]
Length = 612
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD + N L +++P M SL L L N+L +P C++L L +G N+
Sbjct: 227 MKRLKQLDCTCNLL--ETIPSELASMESLELLYLRRNKLRSIPEFPFCRSLKELHVGENQ 284
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L+ +++L+L++NK+ + + L L LDL++N+++ +P L +L H
Sbjct: 285 IEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNLPH 344
Query: 121 LKSLFLGGNPIKTVRNDIL 139
LK L L GNP++T+R D+L
Sbjct: 345 LKFLALEGNPMRTIRRDLL 363
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
L L LS+NKL +SD L L + +LT L++ NQL LP + +NL L + NK+
Sbjct: 92 LTKLILSNNKLQTLSDDLRL---LPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKL 148
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L L L L+NN+++ + G L+NL LD+S+N L+ VP S+L +L
Sbjct: 149 KILPEE-IKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNL 207
Query: 122 KSLFLGGNPIKTVRNDI 138
L L N +K++ +I
Sbjct: 208 VRLNLARNQLKSLPTEI 224
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
++LS NKL SL + + ++ LT L++ N LT LP + K L + L FN+
Sbjct: 464 VNLSFNKLSLISLEISV-LQKLTHLDIRNNLLTALPDEMSALKKLQTINLSFNRFKTFP- 521
Query: 67 DYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D + L + NN++ V + + + LA LDL +N+L VP EL + L++L
Sbjct: 522 DVLYCIPTLETILFSNNQVGSVDALRMKKMDKLATLDLQNNDLLQVPPELGNCMTLRTLL 581
Query: 126 LGGNPIKTVRNDIL 139
L GNP + R IL
Sbjct: 582 LEGNPFRIPRAAIL 595
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L +L+ L++SHNKL LP I ++R+L L L N+LT +P NL L + N
Sbjct: 135 LENLQRLNVSHNKL--KILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++++ F TLT L LNL N++ + + + + L LD + N L +P EL+S+
Sbjct: 193 HLSSVPAS-FSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASME 251
Query: 120 HLKSLFLGGNPIKTV 134
L+ L+L N ++++
Sbjct: 252 SLELLYLRRNKLRSI 266
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D + T L+ L L NNK+ +S ++ L L +LD+ DN+L +PC + L +L+ L +
Sbjct: 84 DRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNV 143
Query: 127 GGNPIKTVRNDI 138
N +K + +I
Sbjct: 144 SHNKLKILPEEI 155
>gi|330791531|ref|XP_003283846.1| hypothetical protein DICPUDRAFT_147550 [Dictyostelium purpureum]
gi|325086232|gb|EGC39625.1| hypothetical protein DICPUDRAFT_147550 [Dictyostelium purpureum]
Length = 1156
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L LDLSHN+L D+ +++SL EL LS N L+ P + NL L+L NKI
Sbjct: 454 LRNLTILDLSHNRL-EDTCREMGNLKSLRELYLSNNLLSRFPTTGNLINLKKLVLDNNKI 512
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + + L++L L+L NKI + S + L NL L+LS NEL D+P L L L
Sbjct: 513 STIPPECVEPLSQLQTLDLSFNKIEGIGSCIQRLKNLKQLNLSHNELIDIPNSLRHLVKL 572
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLDYHCQNVDG 163
SL L N I + + I+ R+ IS+ K L Y N++
Sbjct: 573 HSLSLDYNQISVLPDKIVASLPRLAKLTISNNKIKSLPYAINNLES 618
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 31 ELNLSYNQLTMLPVCTD--CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
EL+LS +L P + KN + L FN I+N+ D F ++KL L + NN ++ +
Sbjct: 388 ELDLSEQELNEFPSFDEPFVKNYKIIDLSFNNISNIPLDSFEKISKLEQLIMFNNNLTYI 447
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ + L NL ILDLS N L D E+ +L L+ L+L N
Sbjct: 448 PTTIETLRNLTILDLSHNRLEDTCREMGNLKSLRELYLSNN 488
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
L +LK L+LSHN+L + +SL + + SL+ L YNQ+++LP + L L +
Sbjct: 546 LKNLKQLNLSHNELIDIPNSLRHLVKLHSLS---LDYNQISVLPDKIVASLPRLAKLTIS 602
Query: 58 FNKINNMENDYFL-TLTKLSLLNLKNNKIS-----------------------EVSSNVG 93
NKI ++ Y + L L LN NN + E+ N+G
Sbjct: 603 NNKIKSLP--YAINNLESLIELNASNNLMELLPEPICYLGNLKKLNLNNNNLKELPENIG 660
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTS- 152
L L L L +N++T +P ++ + GNP+ + + + K I H+K
Sbjct: 661 FLTKLVDLQLYNNQITSLPISFLKCRSIREIGTDGNPLPSYYHLGI---KAIRYHMKNPD 717
Query: 153 -RLDYHCQNVDGGGMS----SQES 171
LDY N D +S SQES
Sbjct: 718 VDLDYLNSNCDSNTISPLLNSQES 741
>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1090
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L++LDLS + + P + SL L+LS+N++ LP +L L L FN
Sbjct: 166 QLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFN 225
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + + L LT L L+L NKI E+ + + L +L L+L N + ++P E+ L
Sbjct: 226 KIQELPAE-ILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLT 284
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+SL LGGN I+ + +ILQ
Sbjct: 285 SLQSLNLGGNNIQELPPEILQ 305
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 37 NQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
N+L+ LP L L + N++ + + L LT L LNL NKI E+ +G L
Sbjct: 63 NKLSALPREIGQLHQLEELQIALNQLQELPPE-ILQLTSLQSLNLGCNKIQELPPEIGQL 121
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L LDL N++ ++P E+ L L+SL L GN I+ + +I Q
Sbjct: 122 TSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQ 166
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L ++ N+L + P + + SL LNL N++ LP +L L L +N
Sbjct: 74 QLHQLEELQIALNQL-QELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSD-------------- 105
KI + + LT L LNL N I E+ +G L L LDLS
Sbjct: 133 KIQELPPE-IGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQL 191
Query: 106 ----------NELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
N++ ++P E+ L L+SL L N I+ + +ILQ
Sbjct: 192 TSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQ 236
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L++L LS NK+ LP I + SL LNL N + LP +L L LG
Sbjct: 236 QLTSLQSLHLSFNKI--QELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGG 293
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N I + + L LT L LNL++N I E+ + L NL LDL N L +P E+
Sbjct: 294 NNIQELPPE-ILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLP-IPPEI 348
>gi|456874712|gb|EMF89984.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 269
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L L+TLDL+HNKL + LP I +++L ELNL+ NQLT LP KNL L L
Sbjct: 117 QLKKLQTLDLNHNKLTT--LPKEIGQLQNLQELNLNGNQLTTLPKEIGQLKNLYRLELNS 174
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L KL L L +N+++ + +G L NL LDLS+N+LT +P E+ L
Sbjct: 175 NQLATLPKEIG-QLQKLQSLGLYSNQLTTLPKEIGKLQNLQELDLSENQLTTLPKEIEQL 233
Query: 119 FHLKSLFLGGN 129
+L+ L L N
Sbjct: 234 KNLRWLSLKNN 244
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 11 SHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDY 68
S N+L + LP I ++ L L+LS NQLT LP K L L L NK+ + +
Sbjct: 81 SKNQLAT--LPKEIGQLKKLQTLHLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEI 138
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L L LNL N+++ + +G L NL L+L+ N+L +P E+ L L+SL L
Sbjct: 139 G-QLQNLQELNLNGNQLTTLPKEIGQLKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYS 197
Query: 129 NPIKTVRNDI 138
N + T+ +I
Sbjct: 198 NQLTTLPKEI 207
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 35 SYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
S NQL LP K L L L N++ + + L KL L+L +NK++ + +G
Sbjct: 81 SKNQLATLPKEIGQLKKLQTLHLSENQLTTLPKE-IEQLKKLQTLDLNHNKLTTLPKEIG 139
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
L NL L+L+ N+LT +P E+ L +L L L N + T+ +I Q K
Sbjct: 140 QLQNLQELNLNGNQLTTLPKEIGQLKNLYRLELNSNQLATLPKEIGQLQK 189
>gi|195329192|ref|XP_002031295.1| GM25913 [Drosophila sechellia]
gi|194120238|gb|EDW42281.1| GM25913 [Drosophila sechellia]
Length = 898
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 27/182 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L L HN ++ LP F +L+EL+ S N + ++P C NL HL
Sbjct: 411 LLRKLECLYLQHNDILE--LPEFEGNEALSELHASNNFIKIIPKAM-CSNLPHL------ 461
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 462 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTVSVLPVTLSSLAH 506
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 507 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAMAKAKE--EGGGIDDASTSAGISVTR 564
Query: 180 YK 181
+
Sbjct: 565 LR 566
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTML-PVCTDCKNLTHLLLG 57
L L L++SHNKL LP +M SL EL N+SYN+ L P +D L L G
Sbjct: 297 LEKLMRLNVSHNKL--SQLPR--EMYSLPELRHLNISYNEFDELNPDISDLHMLEFLDGG 352
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N I ++ L +L+ L L NN I E+ ++ ++ +L +DL N+LT +P ++
Sbjct: 353 HNNIQSLPGGIGF-LVRLTALLLPNNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGL 411
Query: 118 LFHLKSLFLGGNPI 131
L L+ L+L N I
Sbjct: 412 LRKLECLYLQHNDI 425
>gi|91081109|ref|XP_975514.1| PREDICTED: similar to leucine-rich transmembrane protein, putative
[Tribolium castaneum]
Length = 1252
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L+TL L +N++ F + +L L L N+L +P + +L L +G N
Sbjct: 196 LSKLQTLHLGNNEIWKLDGTTFQQVPALRSLRLDGNRLRGVPSEALSSLLHLEVLNIGNN 255
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
IN + F +L KL +L +K N+ISE++ +L +L +L+L DN LT++P ++ L
Sbjct: 256 LINALPPAAFPSLDKLVVLLMKRNQISEIAEEAFANLTSLKVLELDDNFLTEIPAAVTKL 315
Query: 119 FHLKSLFLGGNPIKTVRNDILQDS 142
L+ L + GN IK +R +LQ +
Sbjct: 316 AKLQELSISGNRIKYIRGGLLQKT 339
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
L L+L N+L +P DC+ + L L N I +EN F + ++ L L +N+I +
Sbjct: 413 LKSLDLKSNKLKTIPDLNDCREMRVLDLASNHIRTLENRPFRGMYQMHDLLLAHNEIQYI 472
Query: 89 SSNV-GDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGN 129
+ +L L +L+L DN+++ + P + ++ L LG N
Sbjct: 473 PQDAFYNLSRLQVLNLEDNQISFIHPDAFLPISKIEDLNLGQN 515
>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
Length = 398
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L +N+L++ LP I +++L LNL YNQLT LP +NL L LG N
Sbjct: 158 LKNLQRLQLWNNQLMT--LPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L+L N+++ + + +G L NL L L N+LT +P E+ L
Sbjct: 216 QLTALPNEIG-QLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 274
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+L N + T+ DI Q
Sbjct: 275 NLQTLYLRSNRLTTLSKDIEQ 295
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L HN+L ++LP I+ ++ L L LSYNQL LP +NL L L N
Sbjct: 89 LQNLRVLELIHNQL--ETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDN 146
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN++ + +G L NL L+L N+LT +P E+ L
Sbjct: 147 QLTTLPTEIG-QLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQ 205
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+ L+LG N + + N+I Q K + T+RL
Sbjct: 206 NLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRL 240
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I ++ L EL+LS N+LT LP +NL L LG N
Sbjct: 204 LQNLQELYLGSNQLTA--LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSN 261
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 262 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 320
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 321 NLQVLDLGSNQLTTLPKEIGQ 341
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I +++L L L NQL LP KNL L LG+N
Sbjct: 135 LQNLQELYLRDNQLTT--LPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L +N+++ + + +G L L L LS N LT +P E+ L
Sbjct: 193 QLTALPNEIG-QLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 251
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 252 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 294
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L LS N+L + LP I +++L +L L NQLT+LP KNL L L N
Sbjct: 227 LQKLQELSLSTNRLTT--LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 284
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 285 RLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK 343
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L N + T+ +I Q
Sbjct: 344 NLQVFELNNNQLTTLPKEIGQ 364
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 28/161 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-------------------- 43
++ LDLS KL +LP I+ +++L L LSYNQL LP
Sbjct: 46 VRVLDLSQQKL--KTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLE 103
Query: 44 ----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
K+L L L +N++ + + L L L L++N+++ + + +G L NL
Sbjct: 104 TLPNEIEQLKDLQRLYLSYNQLKTLPKE-IRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 162
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L +N+L +P E+ L +L++L LG N + + N+I Q
Sbjct: 163 RLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQ 203
>gi|195500876|ref|XP_002097562.1| GE24422 [Drosophila yakuba]
gi|194183663|gb|EDW97274.1| GE24422 [Drosophila yakuba]
Length = 928
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 27/186 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L L HN ++ LP F +L+EL+ S N + +P C NL HL
Sbjct: 442 LLRKLECLYLQHNDILE--LPEFEGNETLSELHASNNFIKTIPKAM-CSNLPHL------ 492
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 493 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 537
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + L + +GGG+ +++ I++ +
Sbjct: 538 LISLQVEGNPIKTIRRDILQCGTSRILKTLHERALAKAKE--EGGGVDEAFTSAGISVTR 595
Query: 180 YKLDRT 185
+ ++
Sbjct: 596 LRAGQS 601
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP I + L LN+SYN+ L P +D L L G N
Sbjct: 328 LEKLMRLNVSHNKL--SQLPREIYSLPELRHLNISYNEFNELNPDISDLHMLEFLDGGHN 385
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 386 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMQNDLTCLPEDMGLLR 444
Query: 120 HLKSLFLGGNPI 131
L+ L+L N I
Sbjct: 445 KLECLYLQHNDI 456
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L LDLS N L S P ++++SLT L L N L LP +I +
Sbjct: 285 LNNLDLSSNTLTHLS-PKIVNLQSLTVLTLHDNALVELPP---------------EIGKL 328
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E KL LN+ +NK+S++ + L L L++S NE ++ ++S L L+ L
Sbjct: 329 E--------KLMRLNVSHNKLSQLPREIYSLPELRHLNISYNEFNELNPDISDLHMLEFL 380
Query: 125 FLGGNPIKTVRNDI 138
G N I+++ I
Sbjct: 381 DGGHNNIQSLPGGI 394
>gi|307200860|gb|EFN80906.1| Leucine-rich repeat-containing protein 40 [Harpegnathos saltator]
Length = 352
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 34 LSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
L N L P + C LT L L N I+ + +Y + L+ L+NN+I + +
Sbjct: 3 LHSNNLKEFPDISGCSALTVLHLDNNNISEIVPEYLDGVGNLTKFTLQNNQIEMIPEEII 62
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTS 152
LINL + DLS N ++ +P + L +LK + GN IK +R DI++ + RI++HI+ +
Sbjct: 63 KLINLQVFDLSHNNISLIPFCIGILPNLKQFIIKGNNIKNIRGDIIRCGTPRILAHIRQT 122
Query: 153 RLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQEC 210
NV+ + S S+ DKY + TK L+L ++ PE V + + +
Sbjct: 123 T---DSTNVNTKVLLPCASVSKFP-DKYMMKNTKLLSLSGQNLLEFPEEVLIDAVEAAVT 178
Query: 211 TIEINIDK 218
++++ +K
Sbjct: 179 VVDLSRNK 186
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 20 LPLFID--MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLS 76
LP +I + L L++S N L LP+ C K L + L FN+ + + ++ S
Sbjct: 213 LPEWIGEKYKYLQALDISKNYLESLPLSIGCLKYLRDIDLSFNRFIELPEAIYNVMSLES 272
Query: 77 LLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
L+ +N I E++ S++G L LAIL+L++N + VP EL +L +L++L L GN K R
Sbjct: 273 LI-ANDNLIGEINVSSLGKLKKLAILNLANNNIAHVPPELGNLKNLRNLSLSGNCFKYPR 331
Query: 136 NDIL-QDSKRIISHIK 150
IL +D++ I+ +++
Sbjct: 332 QAILMKDTEEILRYLR 347
>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
Length = 505
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK LDL +N+L S +P I + SL +L L NQL +P +LT + L FN
Sbjct: 210 LASLKGLDLYNNQLTS--VPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L+L NK++ V + +G L +L L L +N+LT VP E+ L
Sbjct: 268 RLTSVPAEIG-QLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLT 326
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LGGN + +V +I Q
Sbjct: 327 SLEWLGLGGNQLTSVPAEIGQ 347
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+L N+L +P I +L E LNL NQLT +P +LT L LG N
Sbjct: 118 LTSLEKLNLYCNQLTI--VPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + + LT L+ L+L+ N+++ V + +G L +L LDL +N+LT VP E+ L
Sbjct: 176 KLTSLPTEIW-QLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLA 234
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + +V +I
Sbjct: 235 SLEKLRLDNNQLASVPAEI 253
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L +N+L S +P I + SL L L NQLT +P +L LLL N
Sbjct: 302 LASLVRLRLDNNQLTS--VPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGN 359
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L N ++ V + +G L +L L L NELT VP E+ L
Sbjct: 360 QLTSVPAEIG-QLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLT 418
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+LG N + V +I Q
Sbjct: 419 SLQRLYLGDNQLTRVPAEIGQ 439
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 28/178 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP----------------- 43
LS L+ LDL +++L S +P I + SL +LNL NQLT++P
Sbjct: 26 LSALRELDLYNSQLTS--VPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGS 83
Query: 44 ----VCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
V + LT L+ LG N++ ++ + LT L LNL N+++ V + +G L
Sbjct: 84 KLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIG-QLTSLEKLNLYCNQLTIVPAEIGQLA 142
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L+L N+LT VP E+ L L L LG N + ++ +I Q + H++ ++L
Sbjct: 143 LLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQL 200
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L+ L L +KL S +P I + SL ELNL N+LT +P + LT L K
Sbjct: 72 LALLERLRLGGSKLTS--VPAEIGQLTSLVELNLGGNRLTSVPA--EIGQLTSL----EK 123
Query: 61 INNMENDYFLT------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+N N + L L LNL N+++ V + +G L +L LDL N+LT +P E
Sbjct: 124 LNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTE 183
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ L L L L GN + +V +I Q
Sbjct: 184 IWQLTSLTCLHLQGNQLTSVPAEIGQ 209
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+L N+L S +P I + SLTEL+L N+LT LP +LT L L N
Sbjct: 141 LALLERLNLDGNQLTS--VPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGN 198
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L NN+++ V + +G L +L L L +N+L VP E+ L
Sbjct: 199 QLTSVPAEIG-QLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLT 257
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L + L N + +V +I Q
Sbjct: 258 SLTEVDLSFNRLTSVPAEIGQ 278
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N+L S +P I + SL +LNL NQLT++P L L L N
Sbjct: 95 LTSLVELNLGGNRLTS--VPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L+L NK++ + + + L +L L L N+LT VP E+ L
Sbjct: 153 QLTSVPAEIG-QLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLA 211
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
LK L L N + +V +I Q ++ ++ RLD
Sbjct: 212 SLKGLDLYNNQLTSVPAEIGQ-----LASLEKLRLD 242
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGFN 59
L+ L+ L L N+L S +P I + SL L L NQLT +P + LT L LG N
Sbjct: 325 LTSLEWLGLGGNQLTS--VPAEIGQLASLERLLLYGNQLTSVPA--EIGQLTSLEWLGLN 380
Query: 60 K-INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
I LT L L L N+++ V + +G L +L L L DN+LT VP E+ L
Sbjct: 381 GNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQL 440
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L L N + ++ +I Q + RLD C
Sbjct: 441 TSLTVLGLNSNQLSSLPAEIGQLT-------SVERLDLRC 473
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L+ N L S +P I + SL EL L N+LT +P +L L LG N
Sbjct: 371 LTSLEWLGLNGNILTS--VPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDN 428
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT L++L L +N++S + + +G L ++ LDL NELT VP + L
Sbjct: 429 QLTRVPAEIG-QLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDLRCNELTSVPAAIRELR 487
Query: 120 HLK---SLFL 126
SLFL
Sbjct: 488 AAPCFCSLFL 497
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL L L+ N LT +P +L L L N
Sbjct: 348 LASLERLLLYGNQLTS--VPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGN 405
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +N+++ V + +G L +L +L L+ N+L+ +P E+ L
Sbjct: 406 ELTSVPAEIG-QLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLT 464
Query: 120 HLKSLFLGGNPIKTVRNDI 138
++ L L N + +V I
Sbjct: 465 SVERLDLRCNELTSVPAAI 483
>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
Length = 561
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD + N L +S+P M SL L L N+L LP CK L L LG N+
Sbjct: 178 MKRLKHLDCNSNLL--ESIPSELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHLGENQ 235
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L + +L+L++NK+ V + L +L LDLS+N+++ +P L L H
Sbjct: 236 IEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-H 294
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
LK L L GNP++T+R +I+ + ++ ++ ++++
Sbjct: 295 LKFLALEGNPMRTIRREIINKGTQEVLKYLRS 326
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T+ +NL L L
Sbjct: 62 LLPALTVLDIHDNQLTS--LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQH 119
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + F L L L++ NN ++ V ++ L +L L+LS N+L ++P E+S +
Sbjct: 120 NELTSIP-EGFEQLFNLEDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAEISGM 178
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++++ +++
Sbjct: 179 KRLKHLDCNSNLLESIPSEL 198
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L +S+NKL S L D+R +LT L++ NQLT LP + +NL L + NK
Sbjct: 43 LTKLIISNNKLQS----LTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNK 98
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L++N+++ + L NL LD+S+N LT VP SSL
Sbjct: 99 LKILPEE-ITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPASFSSLSS 157
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N +K + +I
Sbjct: 158 LVRLNLSSNQLKNLPAEI 175
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLG 57
ML L LDL +N L +SLP +M SL L NLS+N+ +LP
Sbjct: 429 MLQKLSFLDLRNNFL--NSLP--EEMESLIRLQTINLSFNRFKILP-------------- 470
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELS 116
+ ++ L + + NN++ V+ ++ NL LDL +N+L +P EL
Sbjct: 471 ---------EVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELG 521
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ +L++L L GNP + R IL
Sbjct: 522 NCVNLRTLLLDGNPFRVPRAAIL 544
>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 492
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L + LP I +++L EL+L+ NQLT LP + +NL L L N
Sbjct: 157 LQNLQKLNLTRNRLAN--LPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L+NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 215 QLTTLPKE-IGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQ 273
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
HL+ L L N + T+ +I + + +++ RLDY+
Sbjct: 274 HLQELHLENNQLTTLPKEIGK-----LQNLQELRLDYN 306
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L HL+ L L +N+L + LP I +++L EL L YN+LT LP + + L L N
Sbjct: 272 LQHLQELHLENNQLTT--LPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGN 329
Query: 60 KINNMENDYFLTLTKLSLLNL-----------------------KNNKISEVSSNVGDLI 96
+ + + + L L LNL +N+++ + +G L
Sbjct: 330 QFTTVPEEIW-NLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 388
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL +L LSDN+LT +P E+ L +L+ L+L N + T+ +I
Sbjct: 389 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEI 430
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNL-SYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L S LP I +L S NQL LP +NL L L N
Sbjct: 341 LQNLQALNLYSNQLTS--LPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 398
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + + +L +L L LSDN LT P E+ L
Sbjct: 399 QLTTLPKE-IGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQ 457
Query: 120 HLKSLFLGGNP 130
HLK L L P
Sbjct: 458 HLKWLRLENIP 468
>gi|322783661|gb|EFZ10999.1| hypothetical protein SINV_03864 [Solenopsis invicta]
Length = 621
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI--- 61
LKTLD+S N L + +P ++R + + N L P + C LT L L N I
Sbjct: 224 LKTLDISFNHL--EIIPPLGELRKVERIMFQSNNLQEFPDISGCSALTVLHLDNNNIPVC 281
Query: 62 -NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
N ++ + L L L+ NKI + + LINL +LDLS N +T +P + L +
Sbjct: 282 VNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCIGILPN 341
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIK------TSRLDYHCQNVDGGGMSSQESTS 173
LK + GN I VR DI++ + RI++HI+ TS + GG +
Sbjct: 342 LKQFVIEGNNITNVRGDIIRCGTPRILTHIRQIVDNNTSVITRELLQPCGG--------N 393
Query: 174 EINIDKYKLDRTK--TLTLCKVINIPESVYMRGMSSQECTIEINIDK 218
I DKY + TK +LT ++ I E + ++ I+++ +K
Sbjct: 394 NIYPDKYVMKHTKLFSLTGQNLVEISEEILEDAANASVTIIDLSRNK 440
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L TLD+ N L + D +S L+ N L LP + L + L N
Sbjct: 95 FLTELSTLDVRINHL-------YCDFKSA----LNNNLLEKLPAEIGSLRRLRIINLSDN 143
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ +++ TL +L L LKNN +S + +G+LI L +DLS N L+++P + +
Sbjct: 144 KLKSLPYEFY-TLEELCELYLKNNLLSILEPEIGNLIMLTHMDLSYNNLSELPIGMGYMV 202
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L++L L N IK + D+
Sbjct: 203 RLETLNLCHNMIKELPPDV 221
>gi|418719453|ref|ZP_13278653.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410744606|gb|EKQ93347.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 218
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++ LDLS+ +L + LP I ++++LT NL NQL LP KNL +L L +N+
Sbjct: 42 TDVRILDLSNKRLTT--LPKEIGELQNLTVFNLYVNQLKTLPKEIGKLKNLKYLNLNYNE 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L++L+L NN+++ + +G L NL +LDL++N+LT +P E+ L
Sbjct: 100 LTTLPQEIG-KLKNLTVLDLTNNQLTTLPKEIGKLKNLTVLDLTNNQLTTLPKEIGKLQS 158
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L GN + T+ DI
Sbjct: 159 LRELDLSGNQLTTLPKDI 176
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L +L N+L +LP I +++L LNL+YN+LT LP KNLT L L N
Sbjct: 64 LQNLTVFNLYVNQL--KTLPKEIGKLKNLKYLNLNYNELTTLPQEIGKLKNLTVLDLTNN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L++L+L NN+++ + +G L +L LDLS N+LT +P ++ L
Sbjct: 122 QLTTLPKEIG-KLKNLTVLDLTNNQLTTLPKEIGKLQSLRELDLSGNQLTTLPKDIGKLQ 180
Query: 120 HLKSLFLGGNP 130
+L+ L+L P
Sbjct: 181 NLQELYLDDIP 191
>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 526
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L + LP I +++L EL+L+ NQLT LP + +NL L L N
Sbjct: 191 LQNLQKLNLTRNRLAN--LPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNN 248
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L+NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 249 QLTTLPKE-IGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQ 307
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
HL+ L L N + T+ +I + + +++ RLDY
Sbjct: 308 HLQELHLENNQLTTLPKEIGK-----LQNLQELRLDY 339
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L HL+ L L +N+L + LP I +++L EL L YN+LT LP + + L L N
Sbjct: 306 LQHLQELHLENNQLTT--LPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGN 363
Query: 60 KINNMENDYFLTLTKLSLLNL-----------------------KNNKISEVSSNVGDLI 96
+ + + + L L LNL +N+++ + +G L
Sbjct: 364 QFTTVPEEIW-NLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 422
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL +L LSDN+LT +P E+ L +L+ L+L N + T+ +I
Sbjct: 423 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEI 464
>gi|363734095|ref|XP_426162.3| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 [Gallus gallus]
Length = 952
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
+L++L L+ K+ S + L + + L L+LSYN + LP T C++L + L N+I+
Sbjct: 320 NLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQHNQIHE 379
Query: 64 MENDYFLTLTKLSLLNLKNNKI----SEVSSNVGDLINLAILDLSDNELTDVPCE-LSSL 118
+ +D F L+ L +L+L N+I E + +G ++N LDLS NELT VP E LS L
Sbjct: 380 ITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVN---LDLSFNELTSVPTEGLSGL 436
Query: 119 FHLKSLFLGGN 129
LK L GN
Sbjct: 437 NQLK---LAGN 444
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS L++L L N + + F + L L L N LT +P+ ++ +L L L N
Sbjct: 128 LSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSL 118
KI ++ + F L+ L +L+L NNKI + + D L NL LDL+ N + + P + +L
Sbjct: 188 KITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPEAIKAL 247
Query: 119 FHLKSLFLGGNPIKTV 134
+LK L N I +
Sbjct: 248 PNLKELAFHSNYISII 263
>gi|156391121|ref|XP_001635617.1| predicted protein [Nematostella vectensis]
gi|156222713|gb|EDO43554.1| predicted protein [Nematostella vectensis]
Length = 522
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +K +D S N L + LP I M L LNL+ N LT +P + KNL L + N+
Sbjct: 86 LKDVKAIDFSGNSL--EKLPAEIGHMEHLQTLNLNCNALTTVPPLRNAKNLARLDISHNR 143
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ F L ++ + NN I + + VG L L +LDLS+N+L +PCEL+
Sbjct: 144 LESLPEGIF-NLELIAEIYAANNLIQALGNEVGCLHVLKVLDLSENKLEAIPCELADCLK 202
Query: 121 LKSLFLGGNPIKTVR 135
LK L L NPIK R
Sbjct: 203 LKDLNLKENPIKDNR 217
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
LT+L+ L + N ++ V +G+LINL LD+ N + +P + L +K++ G
Sbjct: 37 IFQLTRLNFLQISNTSLNHVPDEIGNLINLRTLDMHRNAIKSIPSTIGKLKDVKAIDFSG 96
Query: 129 NPIKTVRNDI 138
N ++ + +I
Sbjct: 97 NSLEKLPAEI 106
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D L L L++ N I + S +G L ++ +D S N L +P E+ + HL++L L
Sbjct: 58 DEIGNLINLRTLDMHRNAIKSIPSTIGKLKDVKAIDFSGNSLEKLPAEIGHMEHLQTLNL 117
Query: 127 GGNPIKTV 134
N + TV
Sbjct: 118 NCNALTTV 125
>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
Length = 392
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L NKL S +P I + SLT L L N+LT +P +LT+L L N
Sbjct: 160 LTSLTGLGLDGNKLTS--VPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + LT L+ L L NK++ V + +G L +L +L L N LT VP E+ L
Sbjct: 218 KLTSVPAEIG-RLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLT 276
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ LFL GN + +V +I
Sbjct: 277 ALEGLFLDGNKLTSVPAEI 295
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMR--SLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
L+ LK L +++N+L + LP I R SLT LNLS N+LT +P +LT L L
Sbjct: 112 QLASLKDLRITNNEL--EDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLD 169
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
NK+ ++ + LT L++L L N+++ V + +G L +L L LS N+LT VP E+
Sbjct: 170 GNKLTSVPAEIG-RLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGR 228
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L L L L GN + +V +I
Sbjct: 229 LTSLTGLGLDGNKLTSVPAEI 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+LS N+L S +P I + SLT L L N+LT +P +LT L L N
Sbjct: 137 LTSLTGLNLSDNRLTS--VPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L NK++ V + +G L +L L L N+LT VP E+ L
Sbjct: 195 RLTSVPAEIG-RLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLT 253
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L GN + +V +I Q
Sbjct: 254 SLTVLRLDGNRLTSVPAEIGQ 274
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I + SLT L LS N+LT +P +LT L L N
Sbjct: 183 LTSLTVLRLDGNRLTS--VPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + LT L++L L N+++ V + +G L L L L N+LT VP E+ L
Sbjct: 241 KLTSVPAEIG-RLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLT 299
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L +LFL N + +V +I
Sbjct: 300 SLHALFLSDNKLTSVPAEI 318
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L +N+L LP I + SLT+L LS N+LT +P +L L + N
Sbjct: 67 LNALWGLNLRNNELTE--LPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNN 124
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ LT L+ LNL +N+++ V + +G L +L L L N+LT VP E+ L
Sbjct: 125 ELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLT 184
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN + +V +I
Sbjct: 185 SLTVLRLDGNRLTSVPAEI 203
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L LS NKL S +P I + SLT L L N+LT +P +LT L L N
Sbjct: 206 LTSLTYLRLSGNKLTS--VPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L NK++ V + +G L +L L LSDN+LT VP E+ L
Sbjct: 264 RLTSVPAEIG-QLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLT 322
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHI 149
L+ L N + +V +I + +R +++
Sbjct: 323 SLREFTLHNNKLTSVPAEIWRLRERGYAYL 352
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL+NN+++E+ + L +L L LSDN+LT VP E+ L LK L + N +
Sbjct: 67 LNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNEL 126
Query: 132 KTVRNDIL 139
+ + I+
Sbjct: 127 EDLPGKII 134
>gi|47230506|emb|CAF99699.1| unnamed protein product [Tetraodon nigroviridis]
Length = 943
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
S+L++L LS K+ S L D++ L L+LSYN++T +P C L + L N+I
Sbjct: 277 SNLESLTLSGTKISSIPAELCEDLKLLRTLDLSYNRITEVPTLQACVRLQEINLQHNRIG 336
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPCE-LSSLFH 120
++ D F L+ L LL+L N+I + + L L LDLS N LT +P LSSL
Sbjct: 337 LIDRDTFQGLSALRLLDLSRNEIRVIHKDAFLSLSALTNLDLSMNSLTLIPTTGLSSLSQ 396
Query: 121 LKSLFLGGNP 130
LK L GNP
Sbjct: 397 LK---LAGNP 403
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L++L L N + + F ++ L L L N LT +PV + NL L L N
Sbjct: 86 LHSLQSLRLDANHISAVPEDSFEGLQQLRHLWLDDNNLTEVPVGSLRHQANLQALTLALN 145
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
+I+ + + F L+ L +L+L NN+I E+ N L NL LDL+ N L P + +L
Sbjct: 146 RISYIPDSAFANLSSLVVLHLHNNRIKEIGDNCFAGLSNLETLDLNFNSLMVFPRAVQAL 205
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N I ++
Sbjct: 206 PKLKELGFHSNDISSI 221
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
LS L+ LDLS N++ F+ + +LT L+LS N LT++P T +L+ L L N
Sbjct: 346 LSALRLLDLSRNEIRVIHKDAFLSLSALTNLDLSMNSLTLIPT-TGLSSLSQLKLAGN 402
>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 379
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 49 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 107 KTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 165
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ +I
Sbjct: 166 KSLNLSYNQIKTIPKEI 182
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 116 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 174 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 233 NLQDLYLVSNQLTILPNEIRQ 253
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 185 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P + L
Sbjct: 243 QLTILPNE-IRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLK 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQ 322
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 207 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRN 264
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L +L+L +N+++ + +G L
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLK 324
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 325 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 367
>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 379
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 50 VRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +LK
Sbjct: 108 TIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166
Query: 123 SLFLGGNPIKTVRNDI 138
SL L N IKT+ +I
Sbjct: 167 SLNLSYNQIKTIPKEI 182
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L NQLT LP +NL L L N
Sbjct: 185 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 243 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLK 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQ 322
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+TL+L +N+L + S + +++L L+L NQLT P +
Sbjct: 253 QLKNLQTLNLRNNRLTTLSKEIE-QLQNLKSLDLRSNQLTTFP---------------KE 296
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L +L+L +N+++ + +G L NL LDL N+LT +P E+ L +
Sbjct: 297 IEQLKN--------LQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 348
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRI 145
L+ LFL N + + Q+ KRI
Sbjct: 349 LQELFLNNNQLSS------QEKKRI 367
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ L+L N+ + +G L NL L+L+ N+LT +P E+ L +L+ L L N IKT
Sbjct: 49 KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 108
Query: 134 VRNDI 138
+ +I
Sbjct: 109 IPKEI 113
>gi|56403707|emb|CAI29644.1| hypothetical protein [Pongo abelii]
Length = 522
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++LK + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLKKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|197099356|ref|NP_001126583.1| leucine-rich repeat transmembrane neuronal protein 1 precursor
[Pongo abelii]
gi|68052305|sp|Q5R6B1.1|LRRT1_PONAB RecName: Full=Leucine-rich repeat transmembrane neuronal protein 1;
Flags: Precursor
gi|55731993|emb|CAH92705.1| hypothetical protein [Pongo abelii]
Length = 522
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++LK + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLKKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 1117
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L++LK L LS N++ +P FI + +L L LS NQ+T +P C + NL +L L N
Sbjct: 108 LTNLKKLSLSANQITE--IPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + + LT L L L N+I+E+ +G L NL L L+ N++T++P + L
Sbjct: 166 KITEIP-ECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLT 224
Query: 120 HLKSLFLGGNPI 131
+L+ L+ GGN I
Sbjct: 225 NLQLLYFGGNQI 236
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L++L+ LDL N++ +P I + +L +L + N++T +P C + NL L L N
Sbjct: 39 LTNLQELDLRENQITE--IPECIGQLTNLKKLIIGKNKITEIPGCISQLTNLRFLGLWEN 96
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + ++ LT L L+L N+I+E+ +G L NL +L LS N++T++P +S L
Sbjct: 97 QITEIP-EFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLT 155
Query: 120 HLKSLFLGGNPIKTV 134
+L++L+L N I +
Sbjct: 156 NLQNLYLHDNKITEI 170
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L++L+ L N++ +P I + +L LNL NQ+T +P C NL L L N
Sbjct: 223 LTNLQLLYFGGNQITE--MPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKN 280
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L+L +NKI+E+ +G LINL L L++N++T++P + L
Sbjct: 281 QITEIP-ECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLT 339
Query: 120 HLKSLFLGGNPIKTV 134
+L+ L L NP+ V
Sbjct: 340 NLQKLILDNNPLNPV 354
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMEN 66
LDLS K +++ + +L EL+L NQ+T +P C NL L++G NKI +
Sbjct: 22 LDLS-GKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEIPG 80
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
LT L L L N+I+E+ +G L NL L LS N++T++P + L +L+ L L
Sbjct: 81 -CISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGL 139
Query: 127 GGNPIKTVRNDILQ 140
N I + I Q
Sbjct: 140 SRNQITEIPECISQ 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L++L+ L L N++ +P FI + +L +L+LS NQ+T +P NL L L N
Sbjct: 85 LTNLRFLGLWENQITE--IPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L L L +NKI+E+ +G L NL L L N++T++P + L
Sbjct: 143 QITEIP-ECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLT 201
Query: 120 HLKSLFLGGNPIKTV 134
+L++L L GN I +
Sbjct: 202 NLQNLGLTGNQITEI 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++LK L + NK+ +P I + +L L L NQ+T +P NL L L N
Sbjct: 62 LTNLKKLIIGKNKITE--IPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSAN 119
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L LL L N+I+E+ + L NL L L DN++T++P + L
Sbjct: 120 QITEIPK-FIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLT 178
Query: 120 HLKSLFLGGNPIKTV 134
+L++L L GN I +
Sbjct: 179 NLQNLVLIGNQITEI 193
>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 380
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 51 VRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 108
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +LK
Sbjct: 109 TIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 167
Query: 123 SLFLGGNPIKTVRNDI 138
SL L N IKT+ +I
Sbjct: 168 SLNLSYNQIKTIPKEI 183
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 117 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 175 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 233
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 234 NLQDLYLVSNQLTILPNEIGQ 254
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 186 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 243
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 244 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 302
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 303 NLQVLDLGSNQLTTLPEGIGQ 323
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 32/168 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L N
Sbjct: 209 LQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 266
Query: 60 K-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I ++N L L L +L+L +N+++ + +G L N
Sbjct: 267 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKN 326
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 327 LQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 368
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ L+L N+ + +G L NL L+L+ N+LT +P E+ L +L+ L L N IKT
Sbjct: 50 KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 109
Query: 134 VRNDI 138
+ +I
Sbjct: 110 IPKEI 114
>gi|320168689|gb|EFW45588.1| tyrosine-protein kinase transforming protein Src [Capsaspora
owczarzaki ATCC 30864]
Length = 1510
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L LDLS+N++ S S F + +LT L L+ NQ T +P T LT L + +N
Sbjct: 426 LTALTVLDLSNNQIASISATAFAGLTALTGLGLNINQFTSIPTSALTGLTALTFLRIDYN 485
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCE-LSS 117
+I N+ + L L+ LN+ NN++ + SS L L +L+L DN+L VP +
Sbjct: 486 QITNISANALAGLNALTFLNMANNQLRSIPSSAFTSLTALTVLNLGDNQLRSVPSSAFTG 545
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L L N I ++
Sbjct: 546 LTTLMGLGLHNNQITSI 562
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L +LDLS N++ S S F + +LT L+LS NQ+ + LT L L N
Sbjct: 402 LTALTSLDLSANQITSISENAFASLTALTVLDLSNNQIASISATAFAGLTALTGLGLNIN 461
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCE-LSS 117
+ ++ LT L+ L + N+I+ +S+N + L L L++++N+L +P +S
Sbjct: 462 QFTSIPTSALTGLTALTFLRIDYNQITNISANALAGLNALTFLNMANNQLRSIPSSAFTS 521
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L LG N +++V
Sbjct: 522 LTALTVLNLGDNQLRSV 538
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L L++++N+L S F + +LT LNL NQL +P T L L L N
Sbjct: 498 LNALTFLNMANNQLRSIPSSAFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGLHNN 557
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSS 117
+I ++ F +LT L+ L+L NN+I+ +S+N L L L L N T +P L S
Sbjct: 558 QITSISASEFTSLTALTQLHLHNNQITSISANAFTGLTALTRLTLDGNPFTTLPPGLFS 616
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV----------------- 44
L+ L LDLS N++ S S +F + +LT + LS NQ T +P
Sbjct: 809 LAALNRLDLSSNQIASISANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNN 868
Query: 45 ------CTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GD 94
T LT L+ L N++ ++ F LT L L L NN+I+ +S+N
Sbjct: 869 QITSIPATAFAGLTALIGVNLAGNQLRSIPTSAFTGLTALIQLVLPNNQITSISANAFAG 928
Query: 95 LINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTV 134
L L +L L +N++T + S L + +L L NP+ T+
Sbjct: 929 LSALTLLHLYNNQITSISANAFSGLTAMTALALNDNPLTTL 969
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
LS L L L++N + S + F ++ +L L LS N LT + T LT L L N
Sbjct: 103 LSALTVLYLNNNLMTSIPVNAFANLTALKYLYLSSNLLTSISAAALTGLSALTQLYLLNN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP 112
+I ++ F LT L+ L L NN+I+ +S+N L L L L N T +P
Sbjct: 163 QITSIPTQAFPGLTALTYLALDNNQIANISANAFTGLTALTRLALDGNPFTTLP 216
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 28 SLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+ T+L+L NQLT + T L++L L N+I ++ F TL+ L++L L NN +
Sbjct: 57 TTTQLSLQGNQLTSISADAFTGLTALSYLYLQTNQITSISASTFTTLSALTVLYLNNNLM 116
Query: 86 SEVSSNV-GDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTV 134
+ + N +L L L LS N LT + L+ L L L+L N I ++
Sbjct: 117 TSIPVNAFANLTALKYLYLSSNLLTSISAAALTGLSALTQLYLLNNQITSI 167
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 30 TELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
T L L+ NQ+T + T LT L L N+I ++ + F L L+ L+L +N+I+
Sbjct: 765 TILYLNLNQITSISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQIAS 824
Query: 88 VSSNV-GDLINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTV 134
+S+NV L L + LS N+ T +P L+ L LKS+ L N I ++
Sbjct: 825 ISANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSI 873
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 30 TELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
T L L NQ+T + T LT L L N+I ++ + F +LT L++L+L NN+I+
Sbjct: 382 TILYLQSNQITSISENALTGLTALTSLDLSANQITSISENAFASLTALTVLDLSNNQIAS 441
Query: 88 VSSNV-GDLINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDIL 139
+S+ L L L L+ N+ T +P L+ L L L + N I + + L
Sbjct: 442 ISATAFAGLTALTGLGLNINQFTSIPTSALTGLTALTFLRIDYNQITNISANAL 495
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNKINNME 65
L L N+L S S F + +L+ L L NQ+T + T LT L L N + ++
Sbjct: 61 LSLQGNQLTSISADAFTGLTALSYLYLQTNQITSISASTFTTLSALTVLYLNNNLMTSIP 120
Query: 66 NDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCE-LSSLFHLKS 123
+ F LT L L L +N ++ +S + + L L L L +N++T +P + L L
Sbjct: 121 VNAFANLTALKYLYLSSNLLTSISAAALTGLSALTQLYLLNNQITSIPTQAFPGLTALTY 180
Query: 124 LFLGGNPIKTV 134
L L N I +
Sbjct: 181 LALDNNQIANI 191
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNEL 108
N T L L N+I ++ + LT L+ L+L N+I+ +S N L L +LDLS+N++
Sbjct: 380 NTTILYLQSNQITSISENALTGLTALTSLDLSANQITSISENAFASLTALTVLDLSNNQI 439
Query: 109 TDVPC-ELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH-CQNVDGGGM 166
+ + L L L L N ++ L ++ + R+DY+ N+ +
Sbjct: 440 ASISATAFAGLTALTGLGLNINQFTSIPTSALTG----LTALTFLRIDYNQITNISANAL 495
Query: 167 SSQESTSEINIDKYKL 182
+ + + +N+ +L
Sbjct: 496 AGLNALTFLNMANNQL 511
Score = 38.9 bits (89), Expect = 2.2, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNEL 108
N T L L N+I ++ + LT L+ L L++N+I+ +S+N L L LDLS N++
Sbjct: 763 NTTILYLNLNQITSISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQI 822
Query: 109 TDVPCEL-SSLFHLKSLFLGGNPIKTVRNDIL 139
+ + + L L + L GN ++ L
Sbjct: 823 ASISANVFAGLSALTGVVLSGNQFTSMPTSAL 854
>gi|332020817|gb|EGI61215.1| Leucine-rich repeat-containing protein 40 [Acromyrmex echinatior]
Length = 607
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LKTLD+S N+L + +P ++R + + N L P + C LT L L N I
Sbjct: 226 MRSLKTLDISFNQL--EIIPPLGELRKVERIMFQSNNLQEFPDISGCSALTVLHLDNNNI 283
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ + L L ++NN I + + LINL + DLS N ++ +P + L +L
Sbjct: 284 SEIDPQRLEVVGHLKQLTMQNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNL 343
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVD-GGGMSSQE----STSE- 174
K + GN IK +R DI++ + RI++HI+ Q VD M+++E S S
Sbjct: 344 KQFAIEGNNIKNIRGDIIRCGTPRILTHIR--------QTVDVNTSMNTRELLQPSVSNI 395
Query: 175 INIDKYKLDRTKTLTLC 191
I+ DKY + T+ +L
Sbjct: 396 IHPDKYMMKNTRLFSLA 412
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LK LD+S N L + + + L ++ +L +N S+N L LP + L L L N+
Sbjct: 87 LKMLDMSCNSLTVIDNKIELLTELNTLNICINYSFNLLEELPPEIGSLRKLKVLNLSDNR 146
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+ +++++ L +L L L++N+IS + + +GDLI L +DLS N L ++P + L
Sbjct: 147 LKNLPHEFYM-LEELCELYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVR 205
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK+L L N IK + D+
Sbjct: 206 LKTLNLCQNMIKELPPDV 223
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L+LS N+L +LP F + L EL L NQ+++L D LT++ L +N
Sbjct: 134 LRKLKVLNLSDNRL--KNLPHEFYMLEELCELYLRSNQISILEAEIGDLIMLTYMDLSYN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + L +L LNL N I E+ +V ++ +L LD+S N+L +P
Sbjct: 192 NLRELPIGMGY-LVRLKTLNLCQNMIKELPPDVTNMRSLKTLDISFNQLEIIP 243
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 27/170 (15%)
Query: 7 TLDLSHNKL------------VSD---------SLPLFID--MRSLTELNLSYNQLTMLP 43
T+DLS NKL V+D SLP +I + L L++S N L LP
Sbjct: 434 TIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWIGEKYKCLQILDISKNHLQSLP 493
Query: 44 VCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAIL 101
C K L + + FN+ + + + L L +N+I+++ + + L LA+L
Sbjct: 494 SNIGCLKYLRDIDISFNRFTELPETIY-DVEALESLIANDNQIAKIDVPLLEKLKRLAVL 552
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+L++N + +P EL +L +L++L L GN K R IL +D++ I+S+++
Sbjct: 553 NLTNNNIAHIPPELGNLKNLRNLLLSGNCFKYPRQAILMKDTEEILSYLR 602
>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 671
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS NKL ++LP I +R+L +L+LS+NQL LP +NL L L +N
Sbjct: 205 LKNLQILDLSRNKL--EALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYN 262
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NNK+ + +G L NL L+LS N+L +P E+ +L
Sbjct: 263 QLETLPEEIG-QLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLK 321
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L L NP+KT+ +I
Sbjct: 322 NLRTLNLQYNPLKTLPEEI 340
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L +NKL ++LP I +++L +LNL YNQL LP KNL L L +N
Sbjct: 458 LQNLQELNLRYNKL--EALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYN 515
Query: 60 KIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
++ ++ N+ TL K L LNL+ NK+ + +G L N
Sbjct: 516 QLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRN 575
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L IL LS N+L +P E+ L +L+ L+L GN ++ + +I
Sbjct: 576 LKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEI 616
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLSHN+L +LP I +++L EL LS N+L LP + KNL L L N
Sbjct: 67 LKNLQELDLSHNQL--QALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNN 124
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +NK+ + ++G+L NL ILDLS N+L +P E+ L
Sbjct: 125 QLKTLPEEIG-KLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQ 183
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ + DI
Sbjct: 184 NLQELYLSDNKLEALPEDI 202
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L +N+L +LP I +++L EL+L NQL LP +NL L L +N
Sbjct: 504 LKNLQKLNLQYNQL--KTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYN 561
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L L +N++ + + L+NL L LS N+L +P E+ L
Sbjct: 562 KLETLPKEIG-KLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQ 620
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L LG NP+KT+ DI
Sbjct: 621 NLQGLDLGNNPLKTLPKDI 639
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L L +NKL +LP I +++L LNLS N+L LP + KNL L L +
Sbjct: 273 QLQNLRELHLYNNKL--KALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQY 330
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + + L L L+L +NK+ + +G L NL LDLS N+L +P E+ L
Sbjct: 331 NPLKTLPEEIG-KLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQL 389
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L L N ++T+ +I
Sbjct: 390 QNLRELHLYNNQLETLPEEI 409
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L +N L +LP I +++L EL+LS+N+L LP +NL L L N
Sbjct: 320 LKNLRTLNLQYNPL--KTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHN 377
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NN++ + +G L NL ILDLS N+L +P E+ L
Sbjct: 378 QLQALPKEIG-QLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQ 436
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N ++ + +I
Sbjct: 437 NLQILDLRYNQLEALPKEI 455
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLSHNKL ++LP I +++L L+L YNQL LP +
Sbjct: 412 LQNLQILDLSHNKL--EALPKEIGQLQNLQILDLRYNQLEALP---------------KE 454
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L LNL+ NK+ + +G L NL L+L N+L +P E+ L +
Sbjct: 455 IGKLQN--------LQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKN 506
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N +KT+ DI
Sbjct: 507 LQKLNLQYNQLKTLPKDI 524
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL L +N+L +LP I +++L EL LS N+L LP + KNL L L N
Sbjct: 113 LKNLRTLHLYNNQL--KTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRN 170
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +NK+ + ++G+L NL ILDLS N+L +P E+ L
Sbjct: 171 QLKTLPEEIG-KLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLR 229
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L L L N ++T+ +I Q
Sbjct: 230 NLPKLDLSHNQLETLPEEIGQ 250
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL +N+L ++LP I +++L EL+L N+L LP KNL L L
Sbjct: 250 QLQNLQILDLRYNQL--ETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLST 307
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + + L L LNL+ N + + +G L NL LDLS N+L +P E+ L
Sbjct: 308 NKLEALPEEIG-NLKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQL 366
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L L L N ++ + +I Q
Sbjct: 367 QNLPKLDLSHNQLQALPKEIGQ 388
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+K+ +L+L +NK+ + +G L NL LDLS N+L +P ++ L +L+ L+L N ++
Sbjct: 45 SKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLE 104
Query: 133 TVRNDI 138
+ DI
Sbjct: 105 ALPEDI 110
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L +NKL ++LP I +R+L L LS+NQL LP + NL L L N
Sbjct: 550 LQNLQELNLRYNKL--ETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGN 607
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NN + + ++G L +L L L + +L +P E+ L
Sbjct: 608 QLQALPKEIG-KLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLG 666
Query: 120 HL 121
L
Sbjct: 667 EL 668
>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
2006001855]
Length = 576
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+TL+L +NKL + +P I ++RSL EL+LS N+L +LP NL L L
Sbjct: 231 QLQNLQTLNLGYNKLAN--IPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLND 288
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I N+ + L L L L+L N+ + +G L NL LDLSDN+ T +P E+ L
Sbjct: 289 NRIVNLPKEIEL-LQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGEL 347
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
+LK L + NP+ D +Q+
Sbjct: 348 RNLKKLNIDSNPLLPGEKDKIQN 370
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 28/139 (20%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +LK LDLS+N++ VS+ + +R+L LNL N+LT+LP
Sbjct: 186 LQNLKDLDLSNNRIQVVSEKVG---KLRNLERLNLIENRLTVLP---------------K 227
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++N L LNL NK++ + +G+L +L LDLSDNEL +P EL ++
Sbjct: 228 EIGQLQN--------LQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIA 279
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+SL L N I + +I
Sbjct: 280 NLQSLKLNDNRIVNLPKEI 298
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L L L N+L LP KNL L L N++ + + L L LNL N+
Sbjct: 448 LQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKE-IEQLQNLRGLNLHQNR 506
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
+G L L LDLS N+LT +P E+ L +L+ L L NP+ L++ +R
Sbjct: 507 FKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLS------LKEKER 560
Query: 145 IISHIKTSRLDY 156
I + ++D+
Sbjct: 561 IRKLLPNCKIDF 572
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 30/168 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-----------CTDCK 49
L L++LDL N+L ++LP I +++L+ L+LS NQL LP
Sbjct: 94 LQKLQSLDLYGNRL--EALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKD 151
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
LT L G +++N L +LN+ NK+S +G L NL LDLS+N +
Sbjct: 152 RLTILPKGIGELSN-----------LKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQ 200
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
V ++ L +L+ L L N + + +I Q + +++T L Y+
Sbjct: 201 VVSEKVGKLRNLERLNLIENRLTVLPKEIGQ-----LQNLQTLNLGYN 243
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK-------INNMENDYFLTLTKLS 76
++ +L ELNL++N+L+ +P + L L L N+ I ++N +L+L+K
Sbjct: 70 NLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQ 129
Query: 77 LLNLK---------------NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
L L ++++ + +G+L NL IL++S N+++ P E+ L +L
Sbjct: 130 LATLPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNL 189
Query: 122 KSLFLGGNPIKTVRNDI 138
K L L N I+ V +
Sbjct: 190 KDLDLSNNRIQVVSEKV 206
>gi|118090785|ref|XP_001233729.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Gallus gallus]
Length = 521
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 124/243 (51%), Gaps = 11/243 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L S LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVNTLDWI 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY-HCQNVDGGGMSSQESTSEINI 177
+ L+ L L GN I+ + + + + H+K+ +LD +D + S +S + I++
Sbjct: 256 WQLEKLDLSGNEIEYIEPHVFES----VPHLKSLQLDSNRLTYIDSRILDSWKSLTSISL 311
Query: 178 DKYKLDRTKTLTLCKVINIPESVYMRGMSSQEC-TIEINIDKYKLDRTKTLTLCKVINIP 236
D + +C + + S R S+ C T E + LD LC+ P
Sbjct: 312 SANTWDCGR--NVCALASWLSSFKGRYDSNLLCATPEYAQGEDVLDAVYAFHLCEDTVDP 369
Query: 237 ESV 239
SV
Sbjct: 370 TSV 372
>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
Length = 642
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS LK LDL + L S +P I + SL L+L NQLT +P +LTHL LG N
Sbjct: 27 LSALKVLDLRNYHLTS--VPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLGCN 84
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L +N+++ V + +G L +L L L N+LT VP E+ L
Sbjct: 85 QLTSVP-AWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLV 143
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L GN + +V +I Q
Sbjct: 144 ALTELTLYGNQLTSVPAEIGQ 164
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L NKL S +P I +R+L L L+ NQLT +P +L +LLLG N
Sbjct: 211 LAALQWLSLKDNKLTS--VPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHN 268
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +NK++ V +G L +L L+L N+LT VP E+ L
Sbjct: 269 QLTSVPAEIG-QLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLT 327
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L LG N + +V +I Q
Sbjct: 328 SLKWLNLGYNQLTSVPAEIGQ 348
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ L L L +N+L S +P I + SLT L L NQLT +P +LTHL L N
Sbjct: 50 LTSLGVLHLDNNQLTS--VPAEIGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSN 107
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L+ N+++ V + +G L+ L L L N+LT VP E+ L
Sbjct: 108 RLTSVPAEIG-QLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLT 166
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L+LG N + +V I Q
Sbjct: 167 SLTDLYLGCNQLTSVPAWIGQ 187
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L L L L N+L S +P I + SLT+L L NQLT +P +L L L N
Sbjct: 142 LVALTELTLYGNQLTS--VPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGN 199
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+LK+NK++ V + +G L L +L L+ N+LT VP E+ L
Sbjct: 200 QLTSVPAEIG-QLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLA 258
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L LG N + +V +I Q
Sbjct: 259 SLENLLLGHNQLTSVPAEIGQ 279
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L+ L LS N+L S LP I + SL EL LS NQLT +P + L L+L N
Sbjct: 372 LSALRKLSLSRNRLTS--LPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGN 429
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L++N+++ V + +G L +L L L++N+LT +P E+ L
Sbjct: 430 QLTSVPAEIG-QLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLT 488
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L LGGN + +V +I Q
Sbjct: 489 SLVESLLGGNQLTSVPAEIGQ 509
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L L+L N+L S ++ + SL LNL YNQLT +P L L L N+
Sbjct: 303 LTSLVRLELEGNQLTSVPAEIW-QLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQ 361
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + L+ L L+L N+++ + + +G L +L L LSDN+LT VP E+ L
Sbjct: 362 LTSVPAEVG-RLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRA 420
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
LK L L GN + +V +I Q + + H++ +RL
Sbjct: 421 LKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRL 454
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L +P I + SL L L+ NQLT LP +L LLG N
Sbjct: 441 LASLVGLHLRDNRLTG--VPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGN 498
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L+L +N+++ V + VG L L L++S N LT +P E+ L
Sbjct: 499 QLTSVPAEIG-QLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLT 557
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+L N + +V +I Q
Sbjct: 558 SLKGLYLDENELTSVPAEIGQ 578
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L+ N+L S LP I + SL E L NQLT +P +LTHL L N
Sbjct: 464 LTSLEWLYLAENQLTS--LPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDN 521
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L LN+ N ++ + + +G L +L L L +NELT VP E+ L
Sbjct: 522 QLTSVPAEVG-RLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLT 580
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N + ++ +I
Sbjct: 581 SLQELWLNDNQLTSLPAEI 599
>gi|198426338|ref|XP_002124802.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 598
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%), Gaps = 23/243 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LD S+NK+ LP I ++ L L+ N L LP T C L L LG N+
Sbjct: 215 LQSLRILDASNNKI--KCLPDSISTLKQLEILSFRNNLLDQLPSLTSCVCLKELSLGNNR 272
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +++T +L L++NK+SE+ +V +L L D+++N + ++P E+ ++
Sbjct: 273 LTCFPSQLPVSVT---ILELRDNKLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAMES 329
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQ--NVDGGGMSSQESTSEINI 177
+K + + GNPI+T+ + IL + ++ ++ H+++ + + N G + Q +++
Sbjct: 330 IKVVVVSGNPIRTISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIPQSNSNNDLS 389
Query: 178 DKYKLDRTKTLTLCKVINIPESVYMR-GMSSQECTIEINIDKYKLDRTKTLTLCKVINIP 236
+K+ + ++ L L K PESV + + S E+ +++ L R C + NIP
Sbjct: 390 NKHLVASSRKLDLTK--ENPESVTTKLALYS-----ELPVNEVILAR------CSLTNIP 436
Query: 237 ESV 239
E +
Sbjct: 437 EEL 439
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKN---LTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ D LT+LNLS N L LP D ++ L L + NK+ + N L+ L LN
Sbjct: 74 WWDQVELTKLNLSSNLLCSLP--EDLQSFEFLKFLDVHDNKLQALPN-AIGNLSALEHLN 130
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +N++S + ++ L+NL +L L N L ++P L L + + L + N I T+ DI
Sbjct: 131 LSHNQLSIIQTSFNGLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDI 189
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
LK LD+ NKL +LP I ++ +L LNLS+NQL+++
Sbjct: 103 LKFLDVHDNKL--QALPNAIGNLSALEHLNLSHNQLSIIQTS------------------ 142
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
F L L +L L++N++ E+ S++G L N LD+S N++T +P ++ + LK
Sbjct: 143 -----FNGLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKD 197
Query: 124 LFLGGNPIKTVRNDI 138
N + + N+I
Sbjct: 198 FNASFNQLNALPNNI 212
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
LS L+ L+LSHN+L + S +++R L L +N+L LP +N L +
Sbjct: 123 LSALEHLNLSHNQLSIIQTSFNGLVNLRVLL---LQHNRLRELPSSLGRLQNCEKLDISH 179
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D + L N N+++ + +N+G L +L ILD S+N++ +P +S+L
Sbjct: 180 NQITTLPED-ICGIKFLKDFNASFNQLNALPNNIGKLQSLRILDASNNKIKCLPDSISTL 238
Query: 119 FHLKSLFLGGN 129
L+ L N
Sbjct: 239 KQLEILSFRNN 249
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L TL++S+NKL LP I L L+LS N ++ LP +C +L + + +N
Sbjct: 446 LSTLNMSNNKL--KCLPPMIGCFSQLGHLDLSGNAMSALPDELGECISLREINMSYNLFT 503
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ F L L +L NN+++++ N+ L L+ L L +N + +VP EL +
Sbjct: 504 VLPGSIF-KLKNLEVLVADNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFTSI 562
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L GN + R ++LQ + SRL
Sbjct: 563 TALKLEGNLFRVPRQNVLQKGTLALMEYLRSRL 595
>gi|395857831|ref|XP_003801285.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Otolemur garnettii]
gi|395857833|ref|XP_003801286.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 2 [Otolemur garnettii]
gi|395857835|ref|XP_003801287.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Otolemur garnettii]
Length = 522
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H++T +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQTLQLD 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 208 LFKLTELHLEHNDLVKV 224
>gi|320168925|gb|EFW45824.1| flightless-1 [Capsaspora owczarzaki ATCC 30864]
Length = 1369
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM--LP-VCTDCKNLTHLLLGF 58
L+HL++L+L+HN L SL + +L LNLS Q T+ +P V NLT L L +
Sbjct: 173 LAHLESLNLAHNPLEHVSLRPLCALNTLQILNLSSTQRTVSNIPDVLDQLSNLTELDLSY 232
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + + L L LNL NN ++EV +G L NL L+LS N+L+ +P + +
Sbjct: 233 NTLPTIPIVLY-NLASLRRLNLSNNGLTEVLPLIGQLENLETLNLSTNKLSSIPDTIFDI 291
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L++ N ++TV
Sbjct: 292 RTLRRLYVDRNNLRTV 307
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ L+ L+LS+N L ++ LPL + +L LNLS N+L+ +P D + L L + N
Sbjct: 245 LASLRRLNLSNNGL-TEVLPLIGQLENLETLNLSTNKLSSIPDTIFDIRTLRRLYVDRNN 303
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF- 119
+ + D F T+L L +N ++ + ++ L L L+DN+++ VP ++ L
Sbjct: 304 LRTVP-DKFDQCTELELFYAAHNHLTAIPVSICSCTKLRRLKLNDNKISSVPVQIYQLEP 362
Query: 120 HLKSLFLGGNP 130
HLK + NP
Sbjct: 363 HLKLFAVEDNP 373
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ L+LS + ++P +D + +LTEL+LSYN L +P V + +L L L N
Sbjct: 197 LNTLQILNLSSTQRTVSNIPDVLDQLSNLTELDLSYNTLPTIPIVLYNLASLRRLNLSNN 256
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL NK+S + + D+ L L + N L VP +
Sbjct: 257 GLTEVL-PLIGQLENLETLNLSTNKLSSIPDTIFDIRTLRRLYVDRNNLRTVPDKFDQCT 315
Query: 120 HLKSLFLGGNPIKTV 134
L+ + N + +
Sbjct: 316 ELELFYAAHNHLTAI 330
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM--LP-VCTDCKNLTHLLLGFNKI 61
L+ + +S N L + S L +++ L + NQ+ M LP ++L + LG+N +
Sbjct: 58 LEAISVSRNNLKALSSDL-AELKHLGSIIARRNQINMRGLPGAVFLLEDLNTVDLGWNDL 116
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN---LAILDLSDNELTDVPCELSSL 118
+++ D L L +L L +N++ + S + LIN + LD+S+N + +P +L L
Sbjct: 117 SDLPIDA-LEARALKVLALAHNRLKAIPSQL--LINSPDIQFLDVSNNMIDSIPPQLRRL 173
Query: 119 FHLKSLFLGGNPIKTV 134
HL+SL L NP++ V
Sbjct: 174 AHLESLNLAHNPLEHV 189
>gi|153876485|ref|ZP_02003783.1| outermembrane protein [Beggiatoa sp. PS]
gi|152067051|gb|EDN66217.1| outermembrane protein [Beggiatoa sp. PS]
Length = 191
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 9/154 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLG-- 57
L++L LDLSHN+L S LP I + L LNLS NQLT LP D NL L+LG
Sbjct: 38 LTYLNQLDLSHNQLTS--LPAEIWQLTQLKILNLSGNQLTNLPPEIDQLTNLKKLVLGDV 95
Query: 58 --FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N++ + L L++L L NN+++++ +G L L +LDL N+LT +P E+
Sbjct: 96 FGGNQLTVLPRRIG-KLRHLTMLCLANNQLTKLPREIGKLRYLKMLDLRWNQLTTLPAEI 154
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHI 149
+ L L L + GNP+ I Q + I+ ++
Sbjct: 155 ARLPGLIELHIEGNPLAPPAKIIAQGKQAILKYL 188
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
TK +LL L ++++ +G L L LDLS N+LT +P E+ L LK L L GN +
Sbjct: 16 TKATLLELSEQDLTQLPPEIGKLTYLNQLDLSHNQLTSLPAEIWQLTQLKILNLSGNQLT 75
Query: 133 TVRNDI 138
+ +I
Sbjct: 76 NLPPEI 81
>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
str. 1051]
Length = 353
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+LVS +P I +++L +L L NQ+T+LP +NL L L N
Sbjct: 201 LKNLQKLNLSENQLVS--IPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L L L+LKNN+++ + +G L NL L+L +N+LT++P E+ L
Sbjct: 259 QFTSLPKEID-KLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK 317
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
+L+ L L NP+ + ++ ++++ + +D+ +GGG
Sbjct: 318 NLQRLELDSNPLSS------KEKEKVVKLLPNCEIDF-----EGGG 352
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L LK LDL N+L++ + + +++L +LNLS N+L +P KNL L L N+
Sbjct: 109 LKSLKNLDLFRNQLMTVPKEVML-LQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQ 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + L +L L L+NN+ V L NL L+LS+N+L +P E+ L +
Sbjct: 168 IVSLPKE-IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQN 226
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N I + ++LQ
Sbjct: 227 LRDLVLDRNQITILPTEVLQ 246
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+L L+ L+LS N+L +++P I +++L L L +NQ+ LP + + L L+L
Sbjct: 131 LLQTLEKLNLSLNRL--NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILEN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ N+ + L L L LNL N++ + + L NL L L N++T +P E+ L
Sbjct: 189 NRFKNVPGEA-LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ +I
Sbjct: 248 QNLQELYLSENQFTSLPKEI 267
>gi|301612032|ref|XP_002935525.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Xenopus (Silurana) tropicalis]
Length = 521
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 8/186 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L S LF +R LT L++ YN + +PV DC++L L LG+N
Sbjct: 136 MPNLRSVDLSNNNLQSLEADLFHGLRKLTTLHMRYNAIKFVPVRIFQDCRSLKFLDLGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ L++L L + N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLLSLHSLFMRRNKVTIVVNSLDFV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
+ L+ + L GN I+ + + + + S + ++RL Y VD ++S +S S I +
Sbjct: 256 WKLEKMDLSGNEIEYIEPHVFESLPHLESLQLDSNRLTY----VDPRILNSWKSLSSITL 311
Query: 178 DKYKLD 183
D
Sbjct: 312 AGNNWD 317
>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L LDL +N+L S +P I + SL ELNL N LT +P +L L L N
Sbjct: 339 LTSLTLLDLGNNQLTS--MPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRN 396
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ +M + LT L +L+L N++ V + G L +L L L N+LT VP E+ L
Sbjct: 397 QLTSMPAEIG-QLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLT 455
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L LGGN + +V +I Q + H+ ++L
Sbjct: 456 SLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQL 490
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S LP I + SL +L+L+ N+LT LP ++L L L N
Sbjct: 270 LTSLKRLFLHRNQLTS--LPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGN 327
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+LL+L NN+++ + + +G L +L L+L N LT +P E+ L
Sbjct: 328 QLRSVPAEIG-QLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLA 386
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
LK LFL N + ++ +I Q + + H+ ++L
Sbjct: 387 SLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQL 421
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 31/165 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL----- 55
L+ L L L H++L S LP I + SL EL+LSYNQLT LP + LT L+
Sbjct: 41 LTSLTLLILDHDELTS--LPAEIGQLASLVELDLSYNQLTSLPA--EIGQLTSLVKLDLT 96
Query: 56 -------------------LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
LG N++ ++ + LT L LNL++NK++E+ + +G L
Sbjct: 97 TWLEEPPSLLEELDSWELNLGNNRLTSLPAEIG-QLTSLVELNLEHNKLTELPAEIGQLA 155
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN-PIKTVRNDILQ 140
+L L+L +N LT +P E+ L L L L N P+ + +I Q
Sbjct: 156 SLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQ 200
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 27/164 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------CTDC 48
L+ L L+L HNKL LP I + SL ELNL N+LT LP D
Sbjct: 131 LTSLVELNLEHNKLTE--LPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDN 188
Query: 49 KNLTHLLLGFNKINNME-----NDYFLTL-------TKLSLLNLKNNKISEVSSNVGDLI 96
LT L ++ ++ N+ +L T L L L N+++ + + +G L
Sbjct: 189 TPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLA 248
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L L+L N+LT VP E+ L LK LFL N + ++ +I Q
Sbjct: 249 SLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQ 292
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N +++ LP I + SL ELNL N+LT LP +L L L N
Sbjct: 177 LTSLVELNLDDNTPLTE-LPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRN 235
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L LNL N+++ V + +G L +L L L N+LT +P E+ L
Sbjct: 236 QLTSLPAEIG-QLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLT 294
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N + ++ +I Q
Sbjct: 295 SLVKLDLTTNKLTSLPAEIGQ 315
>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
Length = 1119
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L+LS+N+ +++ + +LT+LNLSYNQ+T +P NLT L L N+
Sbjct: 148 LTNLTQLNLSYNQ-ITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQ 206
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + LT L+ LNL N+ +E+ + L NL L LSDN++ ++P ++ L +
Sbjct: 207 RTEIP-EALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTN 265
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L GN IK + I
Sbjct: 266 LTHLILSGNQIKEIPETI 283
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L+LS+N+ +++ + +LT+LNL NQ T +P NLT L L +N+
Sbjct: 171 LTNLTQLNLSYNQ-ITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQ 229
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + LT L+ L L +N+I E+ + L NL L LS N++ ++P ++ L +
Sbjct: 230 RTEIP-EALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTN 288
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L GN IK + I
Sbjct: 289 LTQLGLDGNQIKEIPEAI 306
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L LS N++ +P I + +LT+L L NQ+ +P NLT L L N
Sbjct: 263 LTNLTHLILSGNQI--KEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGN 320
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L L N+I E+ + L NL L LS N++T++P L+ L
Sbjct: 321 QIKEIP-EAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLT 379
Query: 120 HLKSLFLGGNPIKTV 134
+L LFL N I +
Sbjct: 380 NLTQLFLSSNQITQI 394
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L LS N++ +P I + +LT+L LS NQ+T +P V NLT L L N
Sbjct: 332 LTNLTHLILSGNQI--KEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSN 389
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L+L+ N+I+++ + L L +LDL N L P L S++
Sbjct: 390 QITQIP-EALAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISPEILGSVY 448
Query: 120 HLKSL 124
+ S+
Sbjct: 449 QVGSV 453
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 19 SLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+LP+ + + +L +L++S N L +P V +L L+L ++ + + LT L+
Sbjct: 71 TLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIP-EALAKLTNLT 129
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L +N+I+E+ + L NL L+LS N++T++P L+ L +L L L N I +
Sbjct: 130 QLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEI 187
>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 391
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 50 VRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +LK
Sbjct: 108 TIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166
Query: 123 SLFLGGNPIKTVRNDI 138
SL L N IKT+ +I
Sbjct: 167 SLNLSYNQIKTIPKEI 182
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 116 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 174 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQ 253
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 185 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 243 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQ 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 19/149 (12%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L
Sbjct: 207 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTL---- 260
Query: 59 NKINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
N+ N+ TL+K L L+L++N+++ +G L NL +LDL N+LT +
Sbjct: 261 ----NLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 316
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
P + L +L++L L N + T+ +I Q
Sbjct: 317 PEGIGQLKNLQTLDLDSNQLTTLPQEIGQ 345
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ L+L N+ + +G L NL L+L+ N+LT +P E+ L +L+ L L N IKT
Sbjct: 49 KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 108
Query: 134 VRNDI 138
+ +I
Sbjct: 109 IPKEI 113
>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 377
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L N+LT +P E+ L
Sbjct: 126 QLTTLPNE-IGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+SL+LG N + + N+I Q ++ T+RL
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRL 219
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 28/141 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+HN+ ++P I +++L LNL YNQLT LP KNL L LG N
Sbjct: 137 LKNLRVLELTHNQF--KTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ +G L NL L LS N LT +P E+ L
Sbjct: 195 QLTALPNE------------------------IGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+SL+LG N + + N+I Q
Sbjct: 231 NLQSLYLGSNQLTILPNEIGQ 251
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++L LS N+L + LP I +++L L L NQLT+LP KNL L L +N
Sbjct: 206 LQNLQSLYLSTNRLTT--LPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L L N++ + +G L NL LDL N+ T +P E+ L
Sbjct: 264 QFTTLPKE-IGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 323 NLQELYLRDNQLTTIPEEIGQ 343
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L++L L N+L LP I +++L L L YNQ T LP +NL L L +N
Sbjct: 229 LQNLQSLYLGSNQLTI--LPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L N+ + + +G L NL L L DN+LT +P E+ L
Sbjct: 287 QLKTLPKG-IGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQ 345
Query: 120 HLKSLFLGGNPIKT 133
+L+ L+L N + +
Sbjct: 346 NLQELYLRDNQLSS 359
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 60 KINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ N+ + F TL K L LNL N+++ + +G L NL L+L DN+ T +P
Sbjct: 49 RVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILP 108
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDILQ 140
E+ L +LK L+LG N + T+ N+I Q
Sbjct: 109 KEVEKLENLKELYLGSNQLTTLPNEIGQ 136
>gi|357610894|gb|EHJ67199.1| hypothetical protein KGM_10804 [Danaus plexippus]
Length = 357
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMR-SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
L +L HN L ++SLP F+ R +L ELNLS N++ P L +L LG N I
Sbjct: 93 LSSLIAKHNHLTNESLPKSFLKTRNTLRELNLSGNRINFFPEQLLQLTTLKYLYLGGNVI 152
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ D + L L +L++ N+I+EV +VG L +L L LSDN++ +P +++L L
Sbjct: 153 INIPKDIW-KLNSLQILSIGGNQITEVPESVGALTSLQALVLSDNQIEQLPSSIANLKQL 211
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+SL + N +KT+ I++
Sbjct: 212 RSLKIDKNRLKTLPTQIIK 230
>gi|442618950|ref|NP_001262544.1| flyers-cup, isoform F [Drosophila melanogaster]
gi|440217396|gb|AGB95926.1| flyers-cup, isoform F [Drosophila melanogaster]
Length = 802
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 296 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 353
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ L L +L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL HL S
Sbjct: 354 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 413
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
L + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ + +
Sbjct: 414 LQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTRLR 470
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + L LN+SYN+ L P +D L L G N
Sbjct: 201 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 259 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 317
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 318 KLDCLYLQHNDI 329
>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 379
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 50 VRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L L N+++ + +G L L L L N+LT +P E+ L +LK
Sbjct: 108 TIPKE-IEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 166
Query: 123 SLFLGGNPIKTVRNDI 138
SL L N IKT+ +I
Sbjct: 167 SLNLSYNQIKTIPKEI 182
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 207 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L+L++N+++ +G L NL +LDL N+LT +P + L
Sbjct: 265 NRLTTLSKE-IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 323
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+LK LFL N + T+ +I Q
Sbjct: 324 QNLKVLFLNNNQLTTLPKEIGQ 345
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 116 LQKLQWLYLPKNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 174 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQ 253
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 185 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 243 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQ 322
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ L+L N+ + +G L NL L+L+ N+LT +P E+ L +L+ L L N IKT
Sbjct: 49 KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 108
Query: 134 VRNDI 138
+ +I
Sbjct: 109 IPKEI 113
>gi|195039665|ref|XP_001990925.1| GH12365 [Drosophila grimshawi]
gi|193900683|gb|EDV99549.1| GH12365 [Drosophila grimshawi]
Length = 1261
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN L S +P LF + LT L+LS+N+L ++P + KNL L L
Sbjct: 74 LTCLRSLDLRHNHLKSSGIPPELF-HLEELTTLDLSHNRLKVVPEGLERAKNLIVLNLSS 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I N+ F+ LT L L+L N++ + LINL LDLS N P EL L
Sbjct: 133 NQIENIPTPLFIHLTDLLFLDLSYNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL LN+S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLNMSSTQRTLLNFPTSIDSLANLVELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + + + +T L LNL +N+I+E+S+N+ L L+LS N+L +P L L
Sbjct: 229 NALPKLPDCVYNVVT-LVRLNLSDNEINELSANLEHWQRLESLNLSRNQLAALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ LF+ N +
Sbjct: 288 SRLRRLFVNDNKL 300
>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
Length = 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 21 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 78
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 79 KTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 137
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ I
Sbjct: 138 KSLNLSYNQIKTIPKKI 154
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 88 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 145
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 146 QIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 204
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 205 NLQDLYLVSNQLTILPNEIGQ 225
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 157 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 215 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 273
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 274 NLQVLDLGSNQLTTLPEGIGQ 294
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 179 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 236
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L +L+L +N+++ + +G L
Sbjct: 237 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 296
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 297 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 339
>gi|320168566|gb|EFW45465.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L +L + N++ + LFI+ +LTEL+LS NQ+T +P T +LT L LG N
Sbjct: 106 LTALNSLYIGLNQITRITASLFINQAALTELDLSGNQITSIPGTAFTGLTSLTFLALGGN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I N+ F +L + + L N+I+ + + + + L LD++ N+LT++P ++SL
Sbjct: 166 LITNVAAAAFTSLPAVQQMLLDYNQITSLPTTLSSMTALRQLDVTGNQLTNIPSAIASLT 225
Query: 120 HLKSLFLGGNPIKTV 134
L L LG N +V
Sbjct: 226 ALVYLALGENQFTSV 240
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS L+ L LS+N + + +LT + + Q+T +P T L + LG N
Sbjct: 496 LSALEQLFLSYNPISGFPAAAITGLSALTSFSCQFTQITEIPTNAFTGLIALQGVYLGSN 555
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+IN++ + F LT+L+ L+L+NN I+ +S++ L L +L L+ N++T + +
Sbjct: 556 RINSISANVFTALTELTYLDLQNNTITSISASAFTGLSALTVLTLASNQITSLSANTFTV 615
Query: 118 LFHLKSLFLGGNPIKTV 134
L L + L GNP T+
Sbjct: 616 LTSLTMVTLNGNPFTTL 632
Score = 44.7 bits (104), Expect = 0.038, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L +L L +N++ S S F + +L L+L NQ+T + T LT LLL N
Sbjct: 248 LAGLTSLFLDYNQITSISANAFTGLSALKNLHLYGNQITSISANAFTGLSALTQLLLLDN 307
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP 112
+I ++ + F +L LS +NL+ NKI+ +S+N L L L L+ N T +P
Sbjct: 308 QITSISANAFTSLNTLSYINLQRNKITSISANTFTGLAALTTLALNYNPFTTLP 361
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L L N+ S F + LT L L YNQ+T + T L +L L N
Sbjct: 224 LTALVYLALGENQFTSVPANAFSTLAGLTSLFLDYNQITSISANAFTGLSALKNLHLYGN 283
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN-LAILDLSDNELTDVPCE-LSS 117
+I ++ + F L+ L+ L L +N+I+ +S+N +N L+ ++L N++T + +
Sbjct: 284 QITSISANAFTGLSALTQLLLLDNQITSISANAFTSLNTLSYINLQRNKITSISANTFTG 343
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L L +L L NP T+ + Q
Sbjct: 344 LAALTTLALNYNPFTTLPPGLFQ 366
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNM 64
TLDL N + + + +L +L L NQ+T +P L L +G N+I +
Sbjct: 63 TLDLRRNLITNMPTSTLSSLTALNDLFLDENQITSIPAPALASLTALNSLYIGLNQITRI 122
Query: 65 ENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDV-PCELSSLFHLK 122
F+ L+ L+L N+I+ + + L +L L L N +T+V +SL ++
Sbjct: 123 TASLFINQAALTELDLSGNQITSIPGTAFTGLTSLTFLALGGNLITNVAAAAFTSLPAVQ 182
Query: 123 SLFLGGNPIKTV 134
+ L N I ++
Sbjct: 183 QMLLDYNQITSL 194
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L ++ + L +N++ S LP + M +L +L+++ NQLT +P L +L LG N
Sbjct: 178 LPAVQQMLLDYNQITS--LPTTLSSMTALRQLDVTGNQLTNIPSAIASLTALVYLALGEN 235
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
+ ++ + F TL L+ L L N+I+ +S+N L L L L N++T +
Sbjct: 236 QFTSVPANAFSTLAGLTSLFLDYNQITSISANAFTGLSALKNLHLYGNQITSI 288
>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 377
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 47 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 104
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 105 KTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 163
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ I
Sbjct: 164 KSLNLSYNQIKTIPKKI 180
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 114 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 172 QIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 231 NLQDLYLVSNQLTILPNEIGQ 251
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 183 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 241 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 299
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 300 NLQVLDLGSNQLTTLPEGIGQ 320
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 205 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 262
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L +L+L +N+++ + +G L
Sbjct: 263 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 322
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 323 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 365
>gi|326919658|ref|XP_003206096.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Meleagris gallopavo]
Length = 521
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L S LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVNTLDWI 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L+ L L GN I+ + + + + H+K+ +LD
Sbjct: 256 WQLEKLDLSGNEIEYIEPHVFES----VPHLKSLQLD 288
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS N++T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ ++E D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 NLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
LF L L L N + V L R+IS
Sbjct: 208 LFKLTELHLEHNDLVKVN---LAHFPRLIS 234
>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 379
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L EL+LS+NQLT P +NL L L N++ + ND L KL L+L N+
Sbjct: 110 LKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIG-KLQKLERLSLIENQ 168
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
+ +S +G L L +LDL+ N+LT +P E+ L +L+ L L N +KT+ NDI +
Sbjct: 169 LKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNL 228
Query: 145 IISHIKTSRL 154
+ HI +++L
Sbjct: 229 QVLHIGSNQL 238
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDL+ N+L + LP I ++++L EL+L NQL LP + KNL L +G N
Sbjct: 179 LKELQVLDLNGNQLTT--LPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSN 236
Query: 60 KI----------NNMENDYFLT------------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ N++ Y T L L++L+L N++ + +G+L N
Sbjct: 237 QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQN 296
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +LDL +NEL +P E+ L L L L N +KT+ N+I
Sbjct: 297 LTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI 337
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L + N+L +LP I ++++L EL L NQL LP + +NLT L L N
Sbjct: 225 LKNLQVLHIGSNQL--KTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHIN 282
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L++L+L+NN++ + +G+L +L +LDL +NEL +P E+ L
Sbjct: 283 ELKTLPKEIG-ELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLK 341
Query: 120 HLKSLFLGGNP 130
L+ L L P
Sbjct: 342 ELRKLHLDDIP 352
>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDL+ N+L S LP I + SLTELNL NQLT +P +LT L L N
Sbjct: 188 LTSLEKLDLAGNQLTS--LPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNAN 245
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L NN++ V + +G L +L L L DN+LT +P E+ L
Sbjct: 246 QLTSVPAEIG-QLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLT 304
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN + ++ +I
Sbjct: 305 SLMMLHLNGNQLTSLPAEI 323
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L TLDL N+L S +P I + SL L+L NQLT +P +L L L N
Sbjct: 50 LTSLVTLDLHANQLTS--VPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRN 107
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L N+++ V + +G L +LA L +S+N+LT VP E+ L
Sbjct: 108 QLLSVPAEIG-QLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLT 166
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L+L GN + +V +I Q
Sbjct: 167 SLTELYLNGNKLTSVPAEIGQ 187
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L +S+N+L S +P I + SLTEL L+ N+LT +P +L L L N
Sbjct: 142 LTSLAHLYISNNQLTS--VPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGN 199
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L+ LNL N+++ V + +G L +L L L+ N+LT VP E+ L
Sbjct: 200 QLTSLPAEIG-QLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLT 258
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+SLFLG N ++ V +I Q
Sbjct: 259 SLESLFLGNNQLRNVLAEIGQ 279
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L+ NKL S +P I + SL +L+L+ NQLT LP +LT L L N
Sbjct: 165 LTSLTELYLNGNKLTS--VPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHAN 222
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L N+++ V + +G L +L L L +N+L +V E+ L
Sbjct: 223 QLTSVPAEIG-QLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLT 281
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
LK L+L N + ++ +I Q + ++ H+ ++L
Sbjct: 282 SLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQL 316
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
LS L+ L L+ N+L ++P I + SL L+L NQLT +P
Sbjct: 27 LSALRVLYLNDNQL--RNVPAEIGQLTSLVTLDLHANQLTSVPAEIG------------- 71
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
LT L L+L+ N+++ V + +G L +LA L LS N+L VP E+ L
Sbjct: 72 ----------QLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTS 121
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L L+L N + +V +I Q
Sbjct: 122 LAHLYLSRNQLTSVPAEIGQ 141
>gi|432952364|ref|XP_004085078.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Oryzias latipes]
Length = 525
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L + LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNGLKFVPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N++ +V+ ++ LI+L L + +N T V L +
Sbjct: 198 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMHNNRATIVVNTLEWI 257
Query: 119 FH-LKSLFLGGNPIKTVRNDILQDS 142
+H L+ + L N I+ + + + + +
Sbjct: 258 WHFLEKIDLSANEIEYIESHVFEST 282
>gi|442618952|ref|NP_001262545.1| flyers-cup, isoform G [Drosophila melanogaster]
gi|440217397|gb|AGB95927.1| flyers-cup, isoform G [Drosophila melanogaster]
Length = 759
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 27/182 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L L L HN ++ LP F +L EL+ S N + ++P C NL HL
Sbjct: 272 LLRKLDCLYLQHNDILE--LPEFEGNEALNELHASNNFIKIIPKAM-CSNLPHL------ 322
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL H
Sbjct: 323 ---------------KILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAH 367
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L SL + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ +
Sbjct: 368 LISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTR 425
Query: 180 YK 181
+
Sbjct: 426 LR 427
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 158 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 216 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 274
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 275 KLDCLYLQHNDI 286
>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
Length = 412
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+L S +PL I + ++TEL LSYNQLT LP +L L LG N
Sbjct: 257 LRSLERLDLSGNQLTS--VPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDN 314
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +N+++ V + +G L +L I L N+LT +P E+ L
Sbjct: 315 RLTSVPAEIG-QLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLT 373
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L N + +V IL+
Sbjct: 374 SLVEFRLRSNQLTSVPAAILE 394
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L+ N+L + +P I + SL +LNL+ NQLT +P +L L L N
Sbjct: 142 LTALTELNLTENQLTN--VPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDN 199
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ D LT L+ L L N+++ V + +G L +L +L LS N+LT VP E+ L
Sbjct: 200 RLTSVPADIG-QLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLR 258
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN + +V +I Q
Sbjct: 259 SLERLDLSGNQLTSVPLEIGQ 279
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L LS N+L S +P I +RSL L+LS NQLT +P+ +T L L +N
Sbjct: 234 LTSLELLRLSSNQLTS--VPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYN 291
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L +N+++ V + +G L +L L L+DN+LT VP E+ L
Sbjct: 292 QLTSLPAEIG-QLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLT 350
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L N + ++ ++ Q + + +++++L
Sbjct: 351 SLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQL 385
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L+ N+L + +P F + SL EL L N+LT +P +LT L L N
Sbjct: 165 LTSLVKLNLTKNQLTN--VPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGN 222
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L LL L +N+++ V + + L +L LDLS N+LT VP E+ L
Sbjct: 223 QLTSVPAEIG-QLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLT 281
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+ L+L N + ++ +I Q
Sbjct: 282 AMTELYLSYNQLTSLPAEIGQ 302
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ L L L NKL S +P I + SLT L+L NQLT LP LT L L N+
Sbjct: 97 AALIELWLWGNKLTS--VPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQ 154
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+ + LT L LNL N+++ V + L +L L L DN LT VP ++ L
Sbjct: 155 LTNVPAEIG-QLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTS 213
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L L L GN + +V +I Q
Sbjct: 214 LTWLGLYGNQLTSVPAEIGQ 233
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I + SL L LS NQLT +P ++L L L N
Sbjct: 211 LTSLTWLGLYGNQLTS--VPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGN 268
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT ++ L L N+++ + + +G L +L L L DN LT VP E+ L
Sbjct: 269 QLTSVPLEIG-QLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLT 327
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L+L N + +V +I Q
Sbjct: 328 SLWGLYLNDNQLTSVPAEIGQ 348
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L ELN++ N LT+LP +L L L N++ ++ D LT L L L N+
Sbjct: 27 LTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIG-QLTSLERLWLHGNR 85
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ V + +G L L L N+LT VP E+ L L L LG N + ++ +I Q
Sbjct: 86 LTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQ 141
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+++ N L LP I + SL EL L+ NQLT +P +L L L N
Sbjct: 27 LTALRELNVARNALTL--LPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGN 84
Query: 60 KINNM--ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ ++ E F L +L L NK++ V +G L +L L L N+LT +P E+
Sbjct: 85 RLTSVPAEIGQFAALIELWLWG---NKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQ 141
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L L L L N + V +I Q
Sbjct: 142 LTALTELNLTENQLTNVPAEIGQ 164
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L+ N+L S +P I + SL L L N+LT +P L L L N
Sbjct: 50 LTSLRELCLTGNQLTS--VPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGN 107
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + LT L+ L+L +N+++ + + +G L L L+L++N+LT+VP E+ L
Sbjct: 108 KLTSVPEEIG-QLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLT 166
Query: 120 HLKSLFLGGNPIKTV 134
L L L N + V
Sbjct: 167 SLVKLNLTKNQLTNV 181
>gi|76160853|gb|ABA40401.1| bursicon receptor [Tribolium castaneum]
gi|270006443|gb|EFA02891.1| hypothetical protein TcasGA2_TC008163 [Tribolium castaneum]
Length = 1103
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L+TL L +N++ F + +L L L N+L +P + +L L +G N
Sbjct: 66 LSKLQTLHLGNNEIWKLDGTTFQQVPALRSLRLDGNRLRGVPSEALSSLLHLEVLNIGNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
IN + F +L KL +L +K N+ISE++ +L +L +L+L DN LT++P ++ L
Sbjct: 126 LINALPPAAFPSLDKLVVLLMKRNQISEIAEEAFANLTSLKVLELDDNFLTEIPAAVTKL 185
Query: 119 FHLKSLFLGGNPIKTVRNDILQDS 142
L+ L + GN IK +R +LQ +
Sbjct: 186 AKLQELSISGNRIKYIRGGLLQKT 209
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
L L+L N+L +P DC+ + L L N I +EN F + ++ L L +N+I +
Sbjct: 329 LKSLDLKSNKLKTIPDLNDCREMRVLDLASNHIRTLENRPFRGMYQMHDLLLAHNEIQYI 388
Query: 89 SSNVG-DLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGN 129
+ +L L +L+L DN+++ + P + ++ L LG N
Sbjct: 389 PQDAFYNLSRLQVLNLEDNQISFIHPDAFLPISKIEDLNLGQN 431
>gi|320166209|gb|EFW43108.1| ephrin type-B receptor 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGF 58
+ HL LS N++ S S F + +LT+L L+ N +T++P T + LT L L F
Sbjct: 51 LTRHLGDRTLSFNQITSISANAFAGLTALTDLQLNNNNITIIPDYTFANLPALTELHLFF 110
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELS 116
N I ++ + F LT L+LLN N +I+ +++N DL L + +S N++T + P S
Sbjct: 111 NPITSISANSFAGLTVLNLLNSYNCQITSIAANAFTDLSKLTNMQMSGNQITSIAPNVFS 170
Query: 117 SLFHLKSLFLGGNPIKTV 134
+ LK L+L GN I ++
Sbjct: 171 GMSALKILYLNGNQITSI 188
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS LK L L+ N++ S S F + +LT L L NQ+T + TD LT L+L N
Sbjct: 244 LSALKELWLNDNQITSISANAFTGLTALTFLRLYVNQITSISPGAFTDLGALTTLILSTN 303
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
KI ++ + F LT L+ L L N+I+ +S+ DL L L LS N +T + +
Sbjct: 304 KITSISENAFTGLTALTFLQLDANQITSISAGAFTDLGALTTLILSINTITSISANAFTG 363
Query: 118 LFHLKSLFLGGNPIKTV 134
L L +L+L N + ++
Sbjct: 364 LTALTALYLQQNQLDSI 380
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+S LK L L+ N++ S +F D+ +L EL L+ NQ+T + T LT L L N
Sbjct: 220 MSALKILRLNINQITGISAGVFTDLSALKELWLNDNQITSISANAFTGLTALTFLRLYVN 279
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+I ++ F L L+ L L NKI+ +S N L L L L N++T + +
Sbjct: 280 QITSISPGAFTDLGALTTLILSTNKITSISENAFTGLTALTFLQLDANQITSISAGAFTD 339
Query: 118 LFHLKSLFLGGNPIKTV 134
L L +L L N I ++
Sbjct: 340 LGALTTLILSINTITSI 356
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYN-QLTMLPV--CTDCKNLTHLLLGF 58
L L L L N + S S F + L LN SYN Q+T + TD LT++ +
Sbjct: 100 LPALTELHLFFNPITSISANSFAGLTVLNLLN-SYNCQITSIAANAFTDLSKLTNMQMSG 158
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LS 116
N+I ++ + F ++ L +L L N+I+ +S++ L L L L N+++ +
Sbjct: 159 NQITSIAPNVFSGMSALKILYLNGNQITSISASAFTGLTALTYLSLDSNQISSIALNAFP 218
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQD 141
+ LK L L N I + + D
Sbjct: 219 GMSALKILRLNINQITGISAGVFTD 243
>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 379
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 49 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 107 KTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 165
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ I
Sbjct: 166 KSLNLSYNQIKTIPKKI 182
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 116 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 174 QIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 233 NLQDLYLVSNQLTILPNEIGQ 253
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 34/170 (20%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP---------------- 43
L +L++LDLS N+L + LP I +++L +L L NQLT+LP
Sbjct: 207 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264
Query: 44 --------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
+NL L LG N++ + L L +L+L +N+++ + +G L
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIG-QLKNLQVLDLGSNQLTTLPEGIGQL 323
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 367
>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 1115
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
L +L LDLS N+L V +S+ ++ LT+L+LS+NQLT +P T NLT L L
Sbjct: 20 QLVNLTELDLSVNQLTQVPESISQLVN---LTQLDLSHNQLTQVPESITQLVNLTKLNLS 76
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + + L L+ LNL N++++VS ++ L+NL L LS N+LT P +S
Sbjct: 77 VNQLTQVP-ESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQ 135
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L L L N + V I Q
Sbjct: 136 LVNLTQLSLSRNQLTQVPESISQ 158
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
L +L L+LS+N+L V +S+ ++ LT+L+LS N+LT +P + NLT L L
Sbjct: 158 QLVNLTQLNLSYNQLTQVPESISQLVN---LTQLDLSVNKLTQVPESISQLVNLTQLNLS 214
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N++ + ++ L L+ L+L NK+++VS ++ L+NL L LS N+LT VP +S
Sbjct: 215 YNQLTQV-SESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQ 273
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L L L N + V I Q
Sbjct: 274 LVNLTQLSLSDNQLTQVSESISQ 296
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLG 57
L +L LDLS N+L VS+S+ ++ LT+L+LS NQLT + + NLT L L
Sbjct: 296 QLVNLTQLDLSSNQLTQVSESISQLVN---LTQLDLSSNQLTQVSESISQLVNLTQLNLS 352
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
NK+ + + L L+ LNL +N++++V ++ L+NL LDL N++T++P L
Sbjct: 353 INKLTQVP-ESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEE 411
Query: 118 LFHLKSLFLGGNPI 131
L +LK L L NP+
Sbjct: 412 LPNLKELDLRQNPL 425
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLG 57
L +L L LS N+L VS+S+ ++ LT+L+LS NQLT + + NLT L L
Sbjct: 273 QLVNLTQLSLSDNQLTQVSESISQLVN---LTQLDLSSNQLTQVSESISQLVNLTQLDLS 329
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + ++ L L+ LNL NK+++V ++ L+NL L+LSDN+LT VP +S
Sbjct: 330 SNQLTQV-SESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESISQ 388
Query: 118 LFHLKSLFLGGNPIKTV 134
L +L L L GN I +
Sbjct: 389 LVNLTQLDLFGNKITEI 405
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 28/165 (16%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLG 57
L +L LDLS NKL V +S+ ++ LT+LNLSYNQLT + + NLT L L
Sbjct: 181 QLVNLTQLDLSVNKLTQVPESISQLVN---LTQLNLSYNQLTQVSESISQLVNLTQLSLS 237
Query: 58 FNKINNMEND--YFLTLTKLSL--------------------LNLKNNKISEVSSNVGDL 95
NK+ + + LT+LSL L+L +N++++VS ++ L
Sbjct: 238 GNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQL 297
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+NL LDLS N+LT V +S L +L L L N + V I Q
Sbjct: 298 VNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQ 342
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
L +L L LS NKL VS+S+ ++ LT+L+LS N+LT +P + NLT L L
Sbjct: 227 QLVNLTQLSLSGNKLTQVSESISQLVN---LTQLSLSGNKLTQVPESISQLVNLTQLSLS 283
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + ++ L L+ L+L +N++++VS ++ L+NL LDLS N+LT V +S
Sbjct: 284 DNQLTQV-SESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQ 342
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L L L N + V I Q
Sbjct: 343 LVNLTQLNLSINKLTQVPESISQ 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 29 LTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+T+LNLS NQLT +P + NLT L L N++ + + L L+ L+L +N++++
Sbjct: 1 MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVP-ESISQLVNLTQLDLSHNQLTQ 59
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
V ++ L+NL L+LS N+LT VP +S L +L L L GN + V I Q
Sbjct: 60 VPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQ 112
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 28/165 (16%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
L +L LDLSHN+L V +S+ ++ LT+LNLS NQLT +P + NLT L L
Sbjct: 43 QLVNLTQLDLSHNQLTQVPESITQLVN---LTKLNLSVNQLTQVPESISQLVNLTKLNLS 99
Query: 58 FNKINNMEND--YFLTLTKLSL--------------------LNLKNNKISEVSSNVGDL 95
N++ + + LT+LSL L+L N++++V ++ L
Sbjct: 100 GNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQL 159
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+NL L+LS N+LT VP +S L +L L L N + V I Q
Sbjct: 160 VNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQ 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLG 57
L +L L LS NKL V +S+ ++ LT+L+LS NQLT + + NLT L L
Sbjct: 250 QLVNLTQLSLSGNKLTQVPESISQLVN---LTQLSLSDNQLTQVSESISQLVNLTQLDLS 306
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + ++ L L+ L+L +N++++VS ++ L+NL L+LS N+LT VP +S
Sbjct: 307 SNQLTQV-SESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPESISQ 365
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L L L N + V I Q
Sbjct: 366 LVNLTWLNLSDNQLTQVPESISQ 388
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 1 MLSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
L +L LDLS N+L VS+S+ ++ LT+LNLS N+LT +P + NLT L L
Sbjct: 319 QLVNLTQLDLSSNQLTQVSESISQLVN---LTQLNLSINKLTQVPESISQLVNLTWLNLS 375
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + + L L+ L+L NKI+E+ + +L NL LDL N L P L S
Sbjct: 376 DNQLTQVP-ESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQNPLPISPEILGS 434
Query: 118 LFH 120
+H
Sbjct: 435 PYH 437
>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 1041
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 17/167 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
LS+L LDL N+L S +P I + +LTEL L NQLT LP T NLT L L N
Sbjct: 255 LSNLTVLDLGSNQLTS--MPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNN 312
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L+ L+ LNL NK++ + ++G L NL L L DN+LT +P +++L
Sbjct: 313 QLTRLP-ESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTILPESITTLS 371
Query: 120 HLKSLFLGGNP------------IKTVRNDILQDSKRIISHIKTSRL 154
+L L+L NP I+ +R+ Q+ ++ I +I ++L
Sbjct: 372 NLGWLYLNNNPLENPPIEIATKGIQEIRDYFQQEREKGIDYIYEAKL 418
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
LS+L L LS NKL S LP I + +LT L+L NQLT LP T NLT L LG N
Sbjct: 117 LSNLTELYLSVNKLTS--LPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L+ L+ L L +N+++ + ++ L NL LDLS N+LT +P ++ L
Sbjct: 175 QLTSLP-ESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLS 233
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L SL+LG N + ++ I
Sbjct: 234 NLTSLYLGSNQLTSLPESI 252
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L L+ LDL N+L S LP I + +LT L L N+LT LP T NLT L L N
Sbjct: 48 LEQLEVLDLGSNELTS--LPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGN 105
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L+ L+ L L NK++ + ++G L NL LDL N+LT +P ++ L
Sbjct: 106 QLTSLP-ESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLS 164
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L+LG N + ++ I
Sbjct: 165 NLTELYLGHNQLTSLPESI 183
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 49 KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
+ L L L K+ + D + L +L +L+L +N+++ + ++G L NL L L +N+L
Sbjct: 26 QKLKWLYLSGCKLTEVPGDVW-ELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKL 84
Query: 109 TDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
T +P ++ L +L L+L GN + ++ I
Sbjct: 85 TSLPESITKLSNLTELYLDGNQLTSLPESI 114
>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 50 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 107
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L N+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 108 KTIPKE-IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 166
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ +I
Sbjct: 167 KSLNLSYNQIKTIPKEI 183
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 28/130 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L +LP I+ +++L ELNL YNQLT+LP KNL L LG+N
Sbjct: 255 LKNLQLLDLSYNQL--KTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYN 312
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +G L NL +L L++N+LT +P E+ L
Sbjct: 313 QL------------------------TVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 348
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 349 NLQELYLNNN 358
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L+LS+N++ ++P I+ ++ L L L NQLT LP KNL L LG N
Sbjct: 163 LKNLKSLNLSYNQI--KTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNN 220
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LL L +N+++ + + L NL +LDLS N+L +P E+ L
Sbjct: 221 RLTTFPKE-IEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLK 279
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L+ L LG N + + +I Q + +++T L Y+
Sbjct: 280 NLQELNLGYNQLTVLPKEIEQ-----LKNLQTLYLGYN 312
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N++ ++P I+ ++ L L L NQLT LP + L L L N
Sbjct: 94 LKNLRKLNLSANQI--KTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKN 151
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 152 QLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLK 210
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+LG N + T +I Q
Sbjct: 211 NLQTLYLGNNRLTTFPKEIEQ 231
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L L N+L + LP I +++L LNLSYNQ+ +P + + L L L N
Sbjct: 140 LQKLQWLYLPKNQLTT--LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + L NL +L L DN+LT +P E+ L
Sbjct: 198 QLTTLPKE-IEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLK 256
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 257 NLQLLDLSYNQLKTLPKEIEQ 277
>gi|149622186|ref|XP_001514094.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Ornithorhynchus anatinus]
Length = 521
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L + LF +R LT L++ N L +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQALEPDLFHGLRKLTTLHMRSNALKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLSLRRNKVTIVVNSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
+ L+ + L GN I+ + + + + S + ++RL Y +D ++S +S S I +
Sbjct: 256 WQLEKMDLSGNEIEYIEPHVFETVPHLDSLQLDSNRLTY----IDPRILNSWKSLSSITL 311
>gi|161078262|ref|NP_001097773.1| flyers-cup, isoform D [Drosophila melanogaster]
gi|158030247|gb|ABW08663.1| flyers-cup, isoform D [Drosophila melanogaster]
Length = 474
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 175 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 232
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ L L +L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL HL S
Sbjct: 233 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 292
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
L + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ + +
Sbjct: 293 LQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTRLR 349
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L++SHNKL ++ + L LN+SYN+ L P +D L L G N
Sbjct: 80 LEKLVRLNVSHNKLSQLPRAMY-SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNN 138
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 139 IQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRK 197
Query: 121 LKSLFLGGNPI 131
L L+L N I
Sbjct: 198 LDCLYLQHNDI 208
>gi|161078260|ref|NP_001097772.1| flyers-cup, isoform C [Drosophila melanogaster]
gi|442618956|ref|NP_001262547.1| flyers-cup, isoform I [Drosophila melanogaster]
gi|45825103|gb|AAS77459.1| AT17592p [Drosophila melanogaster]
gi|158030246|gb|ABW08662.1| flyers-cup, isoform C [Drosophila melanogaster]
gi|440217399|gb|AGB95929.1| flyers-cup, isoform I [Drosophila melanogaster]
Length = 522
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 223 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 280
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ L L +L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL HL S
Sbjct: 281 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 340
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
L + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ + +
Sbjct: 341 LQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTRLR 397
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + L LN+SYN+ L P +D L L G N
Sbjct: 128 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 185
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 186 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 244
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 245 KLDCLYLQHNDI 256
>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
Length = 624
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L+TL LS N L S LP ++ ++SL L+L +N+L +P V +LT L L FN
Sbjct: 188 LANLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFN 245
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + ND LT L++L+L+ NKI E+ + VG+L+NL D+S N L +P E+ +
Sbjct: 246 RVKYV-NDNIRYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCV 304
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 305 QLSTLDLQHN 314
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+++ +++L HNK+ +F ++LT+LN+ NQLT LP+ N+ L LG N+
Sbjct: 397 FTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQ 456
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +D L L +L L NN + + + + +L L +LDL +N + +P E+ L
Sbjct: 457 LMKIPDD-IQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEENRIDSLPNEIGFLRE 515
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 516 LQKLILQSNQVVSLPRAI 533
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 369 LLSSLSDLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLN 428
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N+++ + ++G +N+ L+L N+L +P ++ L L+ L L N +K + I
Sbjct: 429 MKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIA 488
Query: 140 QDSKRIISHIKTSRLD 155
K + ++ +R+D
Sbjct: 489 NLRKLRVLDLEENRID 504
>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L N+LT +P E+ L
Sbjct: 126 QLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+SL+LG N + + N+I Q ++ T+RL
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRL 219
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+HN+ ++P I +++L LNL YNQLT LP KNL L LG N
Sbjct: 137 LKNLRVLELTHNQF--KTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS--- 116
++ + N+ L L L L N+++ + + +G L NL L L N LT +P E+
Sbjct: 195 QLTALPNEIG-QLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQ 253
Query: 117 --------------------SLFHLKSLFLGGNPIKTVRNDILQ 140
L L++L L GN +KT+ N+I Q
Sbjct: 254 NLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQ 297
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 60 KINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ N+ + F TL K L LNL N+++ + +G L NL L+L DN+ T +P
Sbjct: 49 RVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILP 108
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDILQ 140
E+ L +LK L+LG N + T+ N+I Q
Sbjct: 109 KEVEKLENLKELYLGSNQLTTLPNEIGQ 136
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 26/108 (24%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+TL L N+L +LP I +++L L+LSYNQL LP N+
Sbjct: 275 LKKLRTLSLWGNRL--KTLPNEIGQLKNLQRLHLSYNQLKTLP---------------NE 317
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
I ++N L L+L+NN ++ + +G L NL LDL +NEL
Sbjct: 318 IEQLQN--------LQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNEL 357
>gi|442618954|ref|NP_001262546.1| flyers-cup, isoform H [Drosophila melanogaster]
gi|440217398|gb|AGB95928.1| flyers-cup, isoform H [Drosophila melanogaster]
Length = 571
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 253 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 310
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ L L +L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL HL S
Sbjct: 311 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 370
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
L + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ + +
Sbjct: 371 LQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTRLR 427
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + + L LN+SYN+ L P +D L L G N
Sbjct: 158 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 216 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 274
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 275 KLDCLYLQHNDI 286
>gi|303282505|ref|XP_003060544.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458015|gb|EEH55313.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 782
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +++ L++S N+L SLP + MR L L+ N++ LP + C +L L LG N
Sbjct: 347 LVNVRELNVSRNRL--SSLPESLGAMRRLARLDCRENEIRELPASVEGCDSLAELYLGHN 404
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + ++ + L L++ NN + E+ ++ + + L++LD S N++ V EL
Sbjct: 405 RLATIPDEIGF-VASLRTLDVSNNALKELRPSLAN-VPLSLLDASGNDIVAVAPELGRCV 462
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKR-IISHIKT 151
L+ L L GNP+K++R +IL R +++H+++
Sbjct: 463 TLRKLMLEGNPLKSIRYNILAGPTRELLAHLRS 495
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
NL L + + D + + KL L L +N+I E+ + V +L L LDL++N+L
Sbjct: 675 NLVELRWARGDLTRVPEDVYW-MRKLRALALPDNRIGELRAEVSELTQLDELDLTNNDLP 733
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++P EL L L++L + GN ++ +R IL+
Sbjct: 734 NLPAEL-GLVPLRALKVEGNMLRMIRRPILE 763
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+L+ LLG ++ + L + LN+ N++S + ++G + LA LD +NE+
Sbjct: 325 DLSGNLLGAGLAPDLPDALATGLVNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEIR 384
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++P + L L+LG N + T+ ++I
Sbjct: 385 ELPASVEGCDSLAELYLGHNRLATIPDEI 413
>gi|85861138|gb|ABC86517.1| AT29675p [Drosophila melanogaster]
Length = 474
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 175 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 232
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ L L +L+L++NKI+E+ + L NL LD+S+N ++ +P LSSL HL S
Sbjct: 233 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 292
Query: 124 LFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
L + GNPIKT+R DILQ + RI+ + + + +GGG+ +++ I++ + +
Sbjct: 293 LQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKE--EGGGVDDASTSAGISVTRLR 349
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L L++SHNKL LP + L LN+SYN+ L P +D L L G N
Sbjct: 80 LEKLVRLNVSHNKL--SQLPRAMYSLPELRHLNISYNEFDELNPDISDLHMLEFLDGGHN 137
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I ++ L +L+ L L N I E+ ++ ++ +L +DL N+LT +P ++ L
Sbjct: 138 NIQSLPGGIGF-LVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR 196
Query: 120 HLKSLFLGGNPI 131
L L+L N I
Sbjct: 197 KLDCLYLQHNDI 208
>gi|311252266|ref|XP_003125000.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Sus scrofa]
Length = 522
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
Length = 425
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL +N+L +LP I+ +++L L LS NQLT+LP KNL L L +N
Sbjct: 277 LENLQTLDLRNNQL--KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +LN +N+I+ +S +G L NL +L L++N+LT +P E+ L
Sbjct: 335 QLTTLPNE-IEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 393
Query: 120 HLKSLFLGG 128
+LK L+L
Sbjct: 394 NLKKLYLNN 402
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L LP I+ +++L L L N+LT LP KNL L LG N
Sbjct: 70 LKNLQRLYLHYNQLTV--LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL L +N+++ +S ++ L NL LDLS+N+LT +P E+ L
Sbjct: 128 QLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL+L N T +I Q
Sbjct: 187 NLKSLYLSENQFATFPKEIGQ 207
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 162 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+ +P E+ L
Sbjct: 220 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLE 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 279 NLQTLDLRNNQLKTLPKEIEQ 299
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 93 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 151 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 210 NLKVLFLNNNQITILPNEI 228
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQ ++P +NL L L N
Sbjct: 231 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 289 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L G N I T+ +I Q
Sbjct: 348 NLQVLNFGSNQITTLSQEIGQ 368
>gi|224050295|ref|XP_002188501.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Taeniopygia guttata]
Length = 520
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 105/189 (55%), Gaps = 8/189 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L S LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVNTLDWI 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
+ L+ + L GN I+ + + + + S + ++RL Y +D + S +S + I++
Sbjct: 256 WQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTY----IDSRVLDSWKSLTSISL 311
Query: 178 DKYKLDRTK 186
D ++
Sbjct: 312 SANAWDCSR 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS N++T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ ++E D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 NLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
LF L L L N + V L R+IS
Sbjct: 208 LFKLTELHLEHNDLVKVN---LAHFPRLIS 234
>gi|348664787|gb|EGZ04627.1| hypothetical protein PHYSODRAFT_362636 [Phytophthora sojae]
Length = 277
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LS L+TLDL+ N+L S+ P ++SL L + N LT LP + + LT L+L N +
Sbjct: 56 LSALRTLDLTANRL-SELPPQLNALKSLKTLKVPSNALTTLPDLSGLEALTTLVLDGNVL 114
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ N LTKLSL K NK+ V +V +L L LDLSDN L +P L L L
Sbjct: 115 EDIPNALPPNLTKLSL---KGNKLRAVPRSVLELAQLQELDLSDNALETLPSNLGELQEL 171
Query: 122 KSLFLGGN 129
+ L + GN
Sbjct: 172 QELNVDGN 179
>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 465
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 26 MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L ELNL NQL LP +NL L L N++ + + TL L LNL+NN+
Sbjct: 60 LQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVG-TLQNLRELNLENNQ 118
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
++ + + +G L NL +L+L +N L +P E+ L LK L+LGGN ++T+ +I LQD
Sbjct: 119 LATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQD 177
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L+HN+L LP I + L +L L NQLT LP + L +L L
Sbjct: 289 QLQNLQDLHLAHNQLTV--LPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLAN 346
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L KL L+L NN++ + +G L L LDLS+N+L +P E+ L
Sbjct: 347 NQLRLLPEEIG-KLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKL 405
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
L+ L L GNP T +I+
Sbjct: 406 EKLEDLDLSGNPFTTFPKEIV 426
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L N+L +LP I+ ++ L EL+LS +QL P ++L L+L N
Sbjct: 152 LQKLKRLYLGGNQL--RTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSN 209
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L+NN+++ + + +G L NL L+LS+N+L +P E+ +L
Sbjct: 210 QLVVLSQEIG-KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALE 268
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +T+ I Q
Sbjct: 269 NLQNLHLYSNQFRTLPKQIWQ 289
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L+ L L +N+L +LP + +++L ELNL NQL LP N
Sbjct: 82 QLENLQVLSLYNNRL--RTLPQEVGTLQNLRELNLENNQLATLP---------------N 124
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I +EN L +LNL NN++ + +G L L L L N+L +P E+ +L
Sbjct: 125 GIGQLEN--------LQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQ 176
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
L+ L L + +KT +I L+ KR+I
Sbjct: 177 DLEELHLSRDQLKTFPEEIGKLRSLKRLI 205
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L LK L L N+LV S + +RSL L L NQL LP +NL L L N+
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIG-KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQ 256
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L +N+ + + L NL L L+ N+LT +P E+ L
Sbjct: 257 LVTLPQEIG-ALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEK 315
Query: 121 LKSLFLGGNPIKTVRNDILQDSK 143
L+ L+L N + T+ +I + K
Sbjct: 316 LEDLYLEDNQLTTLPKEIWKLEK 338
>gi|124004620|ref|ZP_01689464.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
gi|123989743|gb|EAY29272.1| leucine Rich Repeat domain protein [Microscilla marina ATCC 23134]
Length = 963
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 18/160 (11%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L++LDLSHN L +S LP+ + L +LNLS+N+L +P T NL L L +
Sbjct: 441 LNKLESLDLSHNLLTELSSELPV---LPKLQKLNLSFNELAKIPAEITQFTNLQELDLSY 497
Query: 59 NKINNMEN-DYFLT---------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
N + ++N DY + L L+ L L +N+++++ +G + L +LD S N+
Sbjct: 498 NFLGAIQNSDYTYSYALPLEISYLDALTHLYLSHNQLTQLPPGIGLIEMLKVLDCSHNQF 557
Query: 109 TDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRII 146
++PCE+ L+ L N ++ + DI L K++I
Sbjct: 558 VEIPCEVFEAETLEVLDFSYNKLEAIPEDIALLPQLKKVI 597
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 19 SLPLFIDMRSLTELNLSYNQ---LTMLPVCTD----CKNLTHLLLGFNKINNMENDYFLT 71
+L LF D R +++NLS L +P C N+ + + ++ I N+ D+F
Sbjct: 104 TLQLFFDWRYDSKINLSGKTDQPLKKIPPLFSKANFCINIKEISIEYHYITNIPTDFF-N 162
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L L+ N ++ + + L +LA+LDLS N+L+ +P LSSL L L + GNP+
Sbjct: 163 LTQLKKLSFANGQLLSMPKAIQQLKHLAVLDLSHNDLSTLPKALSSLSTLVQLNIDGNPL 222
Query: 132 K 132
K
Sbjct: 223 K 223
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L LD+SHN L S S ++ L ELNL +N + +PV
Sbjct: 397 LVMLDMSHNLLESLSGQALQQLKELRELNLGHNFFSAVPV-------------------- 436
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L KL L+L +N ++E+SS + L L L+LS NEL +P E++ +L+ L
Sbjct: 437 ---HLTELNKLESLDLSHNLLTELSSELPVLPKLQKLNLSFNELAKIPAEITQFTNLQEL 493
Query: 125 FLGGNPIKTVRN 136
L N + ++N
Sbjct: 494 DLSYNFLGAIQN 505
Score = 43.9 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 28 SLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
S + ++LS N T +P+ L L + N + ++ L +L LNL +N
Sbjct: 372 STSRVDLSGNLFTQVPMQALLGIHKLVMLDMSHNLLESLSGQALQQLKELRELNLGHNFF 431
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
S V ++ +L L LDLS N LT++ EL L L+ L L N + + +I Q
Sbjct: 432 SAVPVHLTELNKLESLDLSHNLLTELSSELPVLPKLQKLNLSFNELAKIPAEITQ 486
>gi|383872977|ref|NP_001244396.1| leucine-rich repeat transmembrane neuronal protein 1 precursor
[Macaca mulatta]
gi|380812450|gb|AFE78099.1| leucine-rich repeat transmembrane neuronal protein 1 precursor
[Macaca mulatta]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|332239170|ref|XP_003268778.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat transmembrane
neuronal protein 1 [Nomascus leucogenys]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|86990456|ref|NP_849161.2| leucine-rich repeat transmembrane neuronal protein 1 precursor
[Homo sapiens]
gi|146330009|sp|Q86UE6.2|LRRT1_HUMAN RecName: Full=Leucine-rich repeat transmembrane neuronal protein 1;
Flags: Precursor
gi|119619972|gb|EAW99566.1| leucine rich repeat transmembrane neuronal 1, isoform CRA_a [Homo
sapiens]
gi|119619973|gb|EAW99567.1| leucine rich repeat transmembrane neuronal 1, isoform CRA_a [Homo
sapiens]
gi|306921719|dbj|BAJ17939.1| leucine rich repeat transmembrane neuronal 1 [synthetic construct]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|122692465|ref|NP_001073773.1| leucine-rich repeat transmembrane neuronal protein 1 precursor [Bos
taurus]
gi|167008901|sp|A1A4H9.1|LRRT1_BOVIN RecName: Full=Leucine-rich repeat transmembrane neuronal protein 1;
Flags: Precursor
gi|119223886|gb|AAI26504.1| Leucine rich repeat transmembrane neuronal 1 [Bos taurus]
gi|296482523|tpg|DAA24638.1| TPA: leucine-rich repeat transmembrane neuronal protein 1-like [Bos
taurus]
Length = 521
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|55597004|ref|XP_515575.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 4 [Pan troglodytes]
gi|114578414|ref|XP_001164070.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Pan troglodytes]
gi|114578419|ref|XP_001164186.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Pan troglodytes]
gi|397491399|ref|XP_003816651.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Pan paniscus]
gi|397491401|ref|XP_003816652.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 2 [Pan paniscus]
gi|397491403|ref|XP_003816653.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Pan paniscus]
gi|397491405|ref|XP_003816654.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 4 [Pan paniscus]
gi|397491407|ref|XP_003816655.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 5 [Pan paniscus]
gi|402891391|ref|XP_003908931.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Papio anubis]
gi|402891393|ref|XP_003908932.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 2 [Papio anubis]
gi|402891395|ref|XP_003908933.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Papio anubis]
gi|402891397|ref|XP_003908934.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 4 [Papio anubis]
gi|402891399|ref|XP_003908935.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 5 [Papio anubis]
gi|410035287|ref|XP_003949870.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Pan troglodytes]
gi|410035289|ref|XP_003949871.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Pan troglodytes]
gi|426336139|ref|XP_004029561.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Gorilla gorilla gorilla]
gi|426336141|ref|XP_004029562.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426336143|ref|XP_004029563.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Gorilla gorilla gorilla]
gi|28175111|gb|AAH45113.1| LRRTM1 protein [Homo sapiens]
gi|37181740|gb|AAQ88677.1| DFLL675 [Homo sapiens]
gi|158254456|dbj|BAF83201.1| unnamed protein product [Homo sapiens]
gi|313882308|gb|ADR82640.1| leucine rich repeat transmembrane neuronal 1 (LRRTM1) [synthetic
construct]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 398
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ LDLSHN+L +LP I +++L +LNL+ NQLT L + +NL L LG N
Sbjct: 158 LQNLQKLDLSHNQLT--TLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L L+L N+++ + + +L NL LDL N+LT +P E+ +L
Sbjct: 216 QLTTLPEEIW-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQ 274
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L L GN + T+ +I
Sbjct: 275 NLQTLDLEGNQLATLPEEI 293
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLS N+L++ LP I +++L +L+LS+NQLT LP +
Sbjct: 135 LQNLRDLDLSSNQLMT--LPKEIGKLQNLQKLDLSHNQLTTLP---------------KE 177
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L LNL +N+++ +S +G+L NL LDL N+LT +P E+ +L +
Sbjct: 178 IGQLQN--------LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQN 229
Query: 121 LKSLFLGGNPIKTVRNDI 138
L++L LG N + T+ +I
Sbjct: 230 LQTLDLGRNQLTTLPEEI 247
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL N+L + LP I ++++L L+L NQLT LP + +NL L LG N
Sbjct: 204 LQNLQTLDLGRNQLTT--LPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN 261
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
++ + + L L L+L+ N+++ + +G+L NL LDL N+LT +P E+
Sbjct: 262 QLTTLPEEIG-NLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIG 317
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL N+L + LP I ++++L L+L NQL LP + +NL L L N
Sbjct: 250 LQNLQTLDLGRNQLTT--LPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGN 307
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L NN+++ + +G+L L L L N+LT +P E+ +L
Sbjct: 308 QLTTLPKEIGKLQKLKKLY-LYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQ 366
Query: 120 HLKSLFLGGNP 130
LK L LGGNP
Sbjct: 367 KLKMLDLGGNP 377
>gi|320167107|gb|EFW44006.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 624
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNK 60
+H L L N + S S F + +LT L+L YNQ+T +P T LT L +N+
Sbjct: 58 THTTQLTLDLNSITSISANAFTGLTALTYLSLQYNQITGIPAGTFTGLTALTALFFAYNQ 117
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSL 118
I ++ D F LT L+ L+L+NN+++ +S L L L L N++T +P + + L
Sbjct: 118 ITSIPADTFTGLTSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGL 177
Query: 119 FHLKSLFLGGNPIKTVRN 136
L +L L N I ++
Sbjct: 178 TALTTLSLQNNQITSISG 195
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L TL L +N++ S S F + +LT L NQ+T +P T +LT+L L N
Sbjct: 177 LTALTTLSLQNNQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLN 236
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG---DLINLAILDLSDNELTDVP-CEL 115
KI ++ + F LT L+ L+L NNKI+ + VG L L L L N++T +P
Sbjct: 237 KITSISANAFAGLTALTYLSLFNNKITSIP--VGAFTGLTGLTDLYLDGNQITSIPSSSF 294
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQD 141
++L L +L L NPI T+ + +
Sbjct: 295 TNLTALTALALQNNPITTLPPGLFKG 320
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L ++N++ S F + SLT L+L NQ+T + T LT L LG N
Sbjct: 105 LTALTALFFAYNQITSIPADTFTGLTSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC----E 114
+I ++ D F LT L+ L+L+NN+I+ +S L L L N++T +P
Sbjct: 165 QITSIPADTFTGLTALTTLSLQNNQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTG 224
Query: 115 LSSLFHLKSLFL 126
++SL +L SL+L
Sbjct: 225 MTSLTYL-SLYL 235
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L +N++ F + +LT L +YNQ+T +P T +LT+L L N
Sbjct: 81 LTALTYLSLQYNQITGIPAGTFTGLTALTALFFAYNQITSIPADTFTGLTSLTYLSLQNN 140
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ ++ F LT L+ L+L N+I+ + ++ L L L L +N++T + +
Sbjct: 141 QVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGLTALTTLSLQNNQITSISGTAFTG 200
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L+ G N I ++
Sbjct: 201 LTALTCLYFGSNQITSI 217
>gi|440909266|gb|ELR59191.1| Leucine-rich repeat transmembrane neuronal protein 1 [Bos grunniens
mutus]
Length = 521
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|348566443|ref|XP_003469011.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Cavia porcellus]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|16552104|dbj|BAB71240.1| unnamed protein product [Homo sapiens]
gi|29540614|gb|AAO67545.1| leucine-rich repeat transmembrane neuronal 1 protein [Homo sapiens]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
Length = 556
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+LS+L L+L N L LP ++ RSL +L L+ NQ P V D L L L
Sbjct: 382 VLSNLTVLELEDNLL--QHLPQSLEGNRSLVKLTLNRNQFQSFPEVIFDLSGLQILNLAL 439
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + T L LL L++N+I + SN+G + NL +LDL+ N + +P +S+
Sbjct: 440 NQIELVPEALCEANTALKLLALQHNQIHALPSNIGLMANLILLDLTQNHIISLPSSISAC 499
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L++LFL GNP+ + D+L S+
Sbjct: 500 QRLRALFLSGNPLPSFPRDVLLLSR 524
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSL---TELNLSYNQLTMLPVC-TDCKNLTH---- 53
L+ +K LDLS N L DSLP +M SL ++L LS+N+L+ LP + +LTH
Sbjct: 57 LTSMKQLDLSFNML--DSLP--KEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLS 112
Query: 54 -------------------LLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD 94
+LLG N+I+++ T T L L L+ N+I+ + +++G
Sbjct: 113 DFGLQAVPPDLLENSSIRVVLLGHNQISSLPPSVQ-TWTSLVELCLQGNRINRLPASIGF 171
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L LDL N L +P E+ + L L L G +++ D+ D R ++ +++ R+
Sbjct: 172 CTALTSLDLRHNRLRRLPPEMGRMRALNKLLLLGQHHNSIK-DLPTDLDR-LTRLRSLRV 229
Query: 155 DYHCQNVDGGGMSSQESTSEI 175
D++ + G+ S +E+
Sbjct: 230 DHNILEMLPPGLRFLTSLTEL 250
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 51 LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTD 110
+T L L +N+++ + +LT+L L+L +N I+ + +G L ++ LDLS N L
Sbjct: 14 ITRLSLSYNRVSTLPAGIG-SLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDS 72
Query: 111 VPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+P E+SSL L L N + T+ I
Sbjct: 73 LPKEMSSLPDWSKLLLSHNRLSTLPPSI 100
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L+++ ++ L+L N++S + + +G L L LDLS N +T +P ++ L +K L L
Sbjct: 8 ILSISWITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSF 67
Query: 129 NPIKTVRNDI--LQD-SKRIISHIKTSRL 154
N + ++ ++ L D SK ++SH + S L
Sbjct: 68 NMLDSLPKEMSSLPDWSKLLLSHNRLSTL 96
>gi|418741032|ref|ZP_13297408.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410751627|gb|EKR08604.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 288
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+L+ N+L LP I +++L +LNL NQ T+LP + +NL L LG N
Sbjct: 68 LKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L +N+ + +G L NL L+L N+LT +P E+ L
Sbjct: 126 QLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+SL+LG N + + N+I Q ++ T+RL
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRL 219
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 28/141 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+HN+ ++P I +++L LNL YNQLT LP KNL L LG N
Sbjct: 137 LKNLRVLELTHNQF--KTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ +G L NL L LS N LT +P E+ L
Sbjct: 195 QLTALPNE------------------------IGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+SL+LG N + T+ I Q
Sbjct: 231 NLQSLYLGSNLLTTLPKGIGQ 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 60 KINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ N+ + F TL K L LNL N+++ + +G L NL L+L DN+ T +P
Sbjct: 49 RVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILP 108
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDILQ 140
E+ L +LK L+LG N + T+ N+I Q
Sbjct: 109 KEVEKLENLKELYLGSNQLTTLPNEIGQ 136
>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
Length = 580
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS+L+TL LS N L S LP +D ++ L L+L +N+LT +P V +LT L L FN
Sbjct: 144 LSNLETLALSENALTS--LPNTLDNLKLLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT+L++L+ + NKI E+ + +G+L+NL D+S N L +P E+
Sbjct: 202 RLKYV-SDNICNLTRLTMLSFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCV 260
Query: 120 HLKSL 124
L SL
Sbjct: 261 QLSSL 265
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 28/152 (18%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-------------- 48
+L L++ N L ++LPL I ++ ELNL NQL LP C
Sbjct: 379 NLTKLNMKENLL--NALPLDIGSWVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLL 436
Query: 49 ----------KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
L L L N+I+ + ND L +T+L L L++N+I+ + ++G L NL
Sbjct: 437 KRIPTTMVNLHKLRVLDLEENRIDMLPNDIGL-MTELQKLILQSNQITVLPRSIGHLKNL 495
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L + +N L+ +P E+ +L L+SL+L NP
Sbjct: 496 TYLSVGENNLSCLPEEVGTLDSLESLYLNDNP 527
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
++++ HN++ D +P +F R+LT+LN+ N L LP+ + L LG N++
Sbjct: 358 SINVEHNQI--DKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVTMVELNLGTNQLMK 415
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D L L +L L NN + + + + +L L +LDL +N + +P ++ + L+
Sbjct: 416 LPDD-IQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDMLPNDIGLMTELQK 474
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIK 150
L L N I + R I H+K
Sbjct: 475 LILQSNQITVL--------PRSIGHLK 493
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N + + N+I+ + F L+ LN
Sbjct: 325 LLASLSCLTTITLSRNNFTSYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLN 384
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G + + L+L N+L +P ++ L L+ L L N +K + ++
Sbjct: 385 MKENLLNALPLDIGSWVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMV 444
Query: 140 QDSKRIISHIKTSRLD 155
K + ++ +R+D
Sbjct: 445 NLHKLRVLDLEENRID 460
>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 402
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS N+L + P I +++L EL+LS NQLT LP +NL L L N
Sbjct: 110 LKNLQELHLSFNQLTT--FPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + ND L KL L+L N++ +S +G L L +LDL+ N+LT +P E+ L
Sbjct: 168 QLTTLPNDIG-KLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELK 226
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+ L L N +KT+ NDI + + HI +++L
Sbjct: 227 NLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQL 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDL+ N+L + LP I ++++L EL+L NQL LP + KNL L +G N
Sbjct: 202 LKELQVLDLNGNQLTT--LPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSN 259
Query: 60 KI----------NNMENDYFLT------------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ N++ Y T L L++L+L N++ + +G+L N
Sbjct: 260 QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQN 319
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +LDL +NEL +P E+ L L L L N +KT+ N+I
Sbjct: 320 LTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI 360
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L + N+L +LP I ++++L EL L NQL LP + +NLT L L N
Sbjct: 248 LKNLQVLHIGSNQL--KTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHIN 305
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L++L+L+NN++ + +G+L +L +LDL +NEL +P E+ L
Sbjct: 306 ELKTLPKEIG-ELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLK 364
Query: 120 HLKSLFLGGNP 130
L+ L L P
Sbjct: 365 ELRKLHLDDIP 375
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 28/161 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV----------------- 44
+ ++ LDLS+ +L +LP I ++++L LNL NQLT LP
Sbjct: 42 TDVRILDLSNKRLT--TLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQ 99
Query: 45 -------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
KNL L L FN++ ND L L L+L N+++ + +++G L N
Sbjct: 100 FTALPNDIGKLKNLQELHLSFNQLTTFPNDIG-QLQNLRELHLSVNQLTTLPNDIGQLQN 158
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +LDL N+LT +P ++ L L+ L L N +KT+ +I
Sbjct: 159 LQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEI 199
>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 481
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL N+L + LP I ++++L L+L NQLT LP + +NL L LG N
Sbjct: 103 LQNLQTLDLGRNQLTT--LPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN 160
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+ N+++ + +G+L NL LDL N+LT +P E+ L
Sbjct: 161 QLTTLPEEIG-NLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQ 219
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L+L N + T+ ++
Sbjct: 220 NLKKLYLYNNRLTTLPKEV 238
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ LDLSHN+L +LP I +++L +LNL+ NQLT L + +NL L LG N
Sbjct: 57 LQNLQKLDLSHNQLT--TLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRN 114
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L L+L N+++ + + +L NL LDL N+LT +P E+ +L
Sbjct: 115 QLTTLPEEIW-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQ 173
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L L GN + T+ +I
Sbjct: 174 NLQTLDLEGNQLATLPEEI 192
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLS N+L++ LP I +++L +L+LS+NQLT LP +
Sbjct: 34 LQNLRDLDLSSNQLMT--LPKEIGKLQNLQKLDLSHNQLTTLP---------------KE 76
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L LNL +N+++ +S +G+L NL LDL N+LT +P E+ +L +
Sbjct: 77 IGQLQN--------LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQN 128
Query: 121 LKSLFLGGNPIKTVRNDI 138
L++L LG N + T+ +I
Sbjct: 129 LQTLDLGRNQLTTLPEEI 146
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TLDL N+L + LP I ++++L L+L NQLT LP +NL L L N
Sbjct: 172 LQNLQTLDLEGNQLAT--LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN 229
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + + DL NL IL L N+LT +P E+ L
Sbjct: 230 RLTTLPKEVG-KLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQ 288
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ +I
Sbjct: 289 NLQELYLYNNRLTTLPKEI 307
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L +N+L + LP I ++++L +LNL+ NQ T LP + + L L LG N
Sbjct: 287 LQNLQELYLYNNRLTT--LPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRN 344
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
++ + + + L L L+L+ N+++ + +G+L NL LDL N+LT +P E+
Sbjct: 345 QLTTLPEEIW-NLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIG 400
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I ++++L L+L NQL LP + +NL L L N
Sbjct: 333 LQKLQKLSLGRNQLTT--LPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGN 390
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L NN+++ + +G+L L L L N+LT +P E+ +L
Sbjct: 391 QLTTLPKEIGKLQKLKKLY-LYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQ 449
Query: 120 HLKSLFLGGNP 130
LK L LGGNP
Sbjct: 450 KLKMLDLGGNP 460
>gi|3004660|gb|AAC28407.1| flightless [Drosophila melanogaster]
gi|1585893|prf||2202222A flightless I gene
Length = 1256
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + + + +T L LNL +N+++E+++ V L L+LS N+L +P L L
Sbjct: 229 NSLPKLPDCVYNVVT-LVRLNLSDNELTELTAGVELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+L ++ +D + N + M + L L QL +P + L HL L N
Sbjct: 3 VLPFVRGVDFTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHN 62
Query: 60 KINNMENDYFLTLTKLSLL---NLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ + F LT+LS L +L++N++ S + + L L LDLS N+L +VP
Sbjct: 63 RLEKI----FGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSNNQIESI 138
>gi|338213422|ref|YP_004657477.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336307243|gb|AEI50345.1| leucine-rich repeat-containing protein typical subtype [Runella
slithyformis DSM 19594]
Length = 462
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L+ LD+ +N L S P MR L +L LS+NQLT+LP ++L L L N+
Sbjct: 308 LRRLEVLDVYYNDL-STIPPSVSRMRRLQQLALSHNQLTLLPDNLGKLRHLQALYLHHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+N + LT L +L++ N+ S + + +G L + +D+S N L++VP L L
Sbjct: 367 LNRLPGS-IGKLTSLQILDIGYNQFSTLPAQIGSLHRMEEMDMSYNNLSEVPPPLPYLRQ 425
Query: 121 LKSLFLGGNPI 131
LK L+L NP+
Sbjct: 426 LKKLYLRENPV 436
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L+ + L++N+L SL L + ++L LN+ N+ T +P +C+ L L +G+N
Sbjct: 215 LPKLRQIWLNNNQLTDSSLHLTQN-KTLQILNIQGNRFTDIPQAVKNCRRLKSLWMGYNN 273
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + F L +L +NL + + + ++ L L +LD+ N+L+ +P +S +
Sbjct: 274 LTALNQKSFRKLRRLQDINLYSCGLKTLPKDIVKLRRLEVLDVYYNDLSTIPPSVSRMRR 333
Query: 121 LKSLFLGGN 129
L+ L L N
Sbjct: 334 LQQLALSHN 342
>gi|320163976|gb|EFW40875.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 1378
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L LSHN+L S S F + L L L N++T + V T LT L L N
Sbjct: 250 LTALNILYLSHNQLSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPALTSLYLQSN 309
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN--VGDLINLAILDLSDNELTDVPCE-LS 116
I ++ F LT L +L L N+I+ + +N DL L LD+S+N++T +P +
Sbjct: 310 LITSIPPFVFTNLTALQILVLAYNQITGIPANAFTADLAALNYLDVSENQVTSIPANAFA 369
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQ 140
L L SLFL GN I ++ Q
Sbjct: 370 GLHSLSSLFLQGNQITSILTSTFQ 393
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L N++ S S F ++ +LT L L NQLT +P T LT L L N
Sbjct: 154 LNVLTRLSLYGNQITSISANAFSNLPALTTLALYDNQLTSIPADAFTGLSALTELTLYDN 213
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+I ++ + F +L L +L+L +N+I+++S+N L L IL LS N+L+ + +
Sbjct: 214 EITSISANSFTSLPALIILSLDSNRITDISANAFTGLTALNILYLSHNQLSSISANAFTG 273
Query: 118 LFHLKSLFLGGNPIKTVRND 137
L L SL L N I ++ D
Sbjct: 274 LSGLDSLTLFNNEITSIHVD 293
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ + L+L N L S + +L L+LS N++T + T L +L L N
Sbjct: 584 LTAMSQLNLQDNNLASIPASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSN 643
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE-LSSL 118
+I ++ + F +L L+ + L+ N I+ +S+N + L LDL +N +T +P +SL
Sbjct: 644 RITSISANAFTSLPALAFVWLRANWITAISANAFAGVTLTYLDLQNNRITSIPANAFTSL 703
Query: 119 FHLKSLFLGGNPIKTV 134
L +L L NP T+
Sbjct: 704 TALNTLTLNDNPFTTL 719
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ + L+ N++VS S F + +LT ++L N +T +P + D LT+L L N
Sbjct: 82 LTALQVIYLTSNQIVSISSGAFSGLSALTYVSLFNNLITSIPDSLFADLTALTYLGLHGN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
I +M F L L+ L+L N+I+ +S+N +L L L L DN+LT +P + +
Sbjct: 142 LITSMAATAFTGLNVLTRLSLYGNQITSISANAFSNLPALTTLALYDNQLTSIPADAFTG 201
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L L N I ++
Sbjct: 202 LSALTELTLYDNEITSI 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 34 LSYNQLTMLPVCT--DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV-SS 90
L NQ+T +P LT L++ NKI +++ D F LT +S LNL++N ++ + +S
Sbjct: 544 LQANQITSIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPAS 603
Query: 91 NVGDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTV 134
+ L L LDLS+N++TD+ E + L L L+L N I ++
Sbjct: 604 AIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSNRITSI 648
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV---CTDCKNLTHLLLGF 58
L L +L L N + S +F ++ +L L L+YNQ+T +P D L +L +
Sbjct: 298 LPALTSLYLQSNLITSIPPFVFTNLTALQILVLAYNQITGIPANAFTADLAALNYLDVSE 357
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVP 112
N++ ++ + F L LS L L+ N+I+ + +S L L L LSDN T +P
Sbjct: 358 NQVTSIPANAFAGLHSLSSLFLQGNQITSILTSTFQGLTALTHLILSDNPFTTLP 412
>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
Length = 376
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L+TL+L+ N+L +P I + L LNLSYNQLT +P L L L N
Sbjct: 134 LSQLQTLNLNFNQLTE--VPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +LT+L L+L +N+++ V + L L L+LS+N+LT++P ++SL
Sbjct: 192 QLRKVP-EAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLT 250
Query: 120 HLKSLFLGGN 129
L+ L+L GN
Sbjct: 251 QLQELYLVGN 260
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L++L+LS+N+L LP I + L EL L NQLT LP L L L N
Sbjct: 226 LSQLRSLNLSNNQLTE--LPEAIASLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGN 283
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +LT+L L+L +N+++ V + L +L LDLS N+LT VP ++SL
Sbjct: 284 ELTAVP-EAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLS 342
Query: 120 HLKSLFLGGNPI 131
L+ L+L NP+
Sbjct: 343 QLQELYLDDNPL 354
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ L LS+N+L +P I + L LNL++NQLT +P L L L +N
Sbjct: 111 LTQLQKLYLSNNQLTQ--VPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYN 168
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +LT+L L L NN++ +V + L L L LSDNELT VP ++SL
Sbjct: 169 QLTEVP-ETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLS 227
Query: 120 HLKSLFLGGN 129
L+SL L N
Sbjct: 228 QLRSLNLSNN 237
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L+ L+LS+NKL +P I + L LNL YN+LT +P L L L N
Sbjct: 65 LSQLQILNLSNNKLTE--VPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +L++L LNL N+++EV + L L L+LS N+LT+VP ++SL
Sbjct: 123 QLTQVP-EAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLT 181
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N ++ V I
Sbjct: 182 QLEWLYLNNNQLRKVPEAI 200
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L+ L+ L LS N+L V +++ +RSL NLS NQLT LP L L L
Sbjct: 203 LTQLQRLSLSDNELTAVPEAIASLSQLRSL---NLSNNQLTELPEAIASLTQLQELYLVG 259
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + +LT+L L L N+++ V + L L L LSDNELT VP ++SL
Sbjct: 260 NQLTELP-EAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASL 318
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
HL+ L L N + V I
Sbjct: 319 THLQGLDLSYNQLTQVPEAI 338
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ LDL N+L +P I + L LNLS N+LT +P L L L +N
Sbjct: 42 LTQLQRLDLDCNQLTK--VPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYN 99
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + TLT+L L L NN++++V + L L L+L+ N+LT+VP ++SL
Sbjct: 100 KLTEVP-EAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLS 158
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + V I
Sbjct: 159 QLRRLNLSYNQLTEVPETI 177
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 30 TELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
T+L+L Y +LT +P L L L N++ + + +L++L +LNL NNK++EV
Sbjct: 23 TKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVP-EAIASLSQLQILNLSNNKLTEV 81
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ L L L+L N+LT+VP +++L L+ L+L N + V I
Sbjct: 82 PEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAI 131
>gi|167041706|gb|ABZ06450.1| putative leucine-rich repeat protein [uncultured marine
microorganism HF4000_010I05]
Length = 266
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 33/159 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L LDLS N L + LP I +R+LT+LN+ N L LP + NLT+L LG +
Sbjct: 40 LTSLIELDLSLNDLTA--LPPEIGKLRNLTQLNVGANDLAELPPEIGNLTNLTNLQLGHS 97
Query: 60 K--------------INNMENDYFLTL---------------TKLSLLNLKNNKISEVSS 90
+ I NM + +L L T L LNL +N+++ +
Sbjct: 98 RMSHRHNQLTELPPEIGNMASLTWLNLYGNYLYELPAEIGNLTNLKFLNLDDNRLTGLPP 157
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+G L NL ILDL++NELT++P E+ +L LK L LGGN
Sbjct: 158 TIGKLGNLNILDLTNNELTELPPEIGNLTGLKELLLGGN 196
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
Query: 2 LSHLKTLDLSHNKL------VSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHL 54
L++L L L H+++ +++ P +M SLT LNL N L LP + NL L
Sbjct: 86 LTNLTNLQLGHSRMSHRHNQLTELPPEIGNMASLTWLNLYGNYLYELPAEIGNLTNLKFL 145
Query: 55 LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI------------------ 96
L N++ + L L++L+L NN+++E+ +G+L
Sbjct: 146 NLDDNRLTGLP-PTIGKLGNLNILDLTNNELTELPPEIGNLTGLKELLLGGNRLTWLPAE 204
Query: 97 -----NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+LA L L DN LT++PCEL L L L+L GN
Sbjct: 205 LGNLNDLAELFLEDNRLTELPCELERLTDLSILYLFGN 242
>gi|17933612|ref|NP_525097.1| flightless I [Drosophila melanogaster]
gi|12643735|sp|Q24020.1|FLII_DROME RecName: Full=Protein flightless-1; AltName: Full=Flightless-I
gi|440173|gb|AAC03566.1| flightless-I [Drosophila melanogaster]
gi|4972754|gb|AAD34772.1| unknown [Drosophila melanogaster]
gi|22833187|gb|AAF50830.2| flightless I [Drosophila melanogaster]
gi|220943712|gb|ACL84399.1| fliI-PA [synthetic construct]
gi|738981|prf||2001494A fli protein
Length = 1256
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + + + +T L LNL +N+++E+++ V L L+LS N+L +P L L
Sbjct: 229 NSLPKLPDCVYNVVT-LVRLNLSDNELTELTAGVELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+L ++ +D + N + M + L L QL +P + L HL L N
Sbjct: 3 VLPFVRGVDFTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHN 62
Query: 60 KINNMENDYFLTLTKLSLL---NLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ + F LT+LS L +L++N++ S + + L L LDLS N+L +VP
Sbjct: 63 RLEKI----FGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSNNQIESI 138
>gi|410955208|ref|XP_003984249.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Felis catus]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|431920393|gb|ELK18425.1| Leucine-rich repeat transmembrane neuronal protein 1 [Pteropus
alecto]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLNSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|194897590|ref|XP_001978685.1| GG19722 [Drosophila erecta]
gi|190650334|gb|EDV47612.1| GG19722 [Drosophila erecta]
Length = 1256
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSLDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N+++E+S+ V L L+LS N+L +P L L
Sbjct: 229 NSLPKLP-DCVYNVVTLVRLNLSDNELTELSAGVELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 37.4 bits (85), Expect = 6.9, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
+L ++ +D + N + M + L L QL +P + L HL L N
Sbjct: 3 VLPFVRGVDFTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGLLQKLEHLSLNHN 62
Query: 60 KINNMENDYFLTLTKLSLL---NLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ + F LT+LS L +L++N++ S + + L L LDLS N+L +VP
Sbjct: 63 RLEKI----FGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSNNQIESI 138
>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 955
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L++LDLS N+L SLP I + L LNLS+N+L+ LP L L L
Sbjct: 120 QLTKLQSLDLSFNQL--SSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYN 177
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + LTKL L+L NN++S + + +G L L LDL +N+L+ +P E+ L
Sbjct: 178 NQLSSLPAE-IGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQL 236
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + ++ +I+Q
Sbjct: 237 TNLQFLHLSHNKLSSLPAEIVQ 258
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+TLDL +N+L SLP I + L L+L NQL+ LP NL L L
Sbjct: 189 QLTKLQTLDLYNNQL--SSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSH 246
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK++++ + + LT L L+L +NK+S + + + L NL LDLS N+L+ +P E+ L
Sbjct: 247 NKLSSLPAE-IVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEIGQL 305
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L GN + ++ +I
Sbjct: 306 TKLQFLNLKGNQLNSLPTEI 325
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L+ L+ + NKL SLP I + L LNLS+N+L+ LP L L L F
Sbjct: 74 LLAQLEEFHIVRNKL--SSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSF 131
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + L KL LNL +N++S + + +G L L LDL +N+L+ +P E+ L
Sbjct: 132 NQLSSLPAE-IGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQL 190
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L++L L N + ++ +I Q +K
Sbjct: 191 TKLQTLDLYNNQLSSLPAEIGQLTK 215
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L++L+LSHN+L SLP I + L L+L NQL+ LP L L L
Sbjct: 143 QLAKLQSLNLSHNRL--SSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYN 200
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + LTKL L+L NN++S + + +G L NL L LS N+L+ +P E+ L
Sbjct: 201 NQLSSLPAE-IGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQL 259
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + ++ +I+Q
Sbjct: 260 TNLQFLHLSHNKLSSLPAEIVQ 281
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ L+TLDL +N+L SLP I + L L+L NQL+ LP L L L
Sbjct: 166 QLTKLQTLDLYNNQL--SSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYN 223
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + LT L L+L +NK+S + + + L NL L LS N+L+ +P E+ L
Sbjct: 224 NQLSSLPAE-IGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQL 282
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+L+SL L N + ++ +I Q +K ++K ++L+
Sbjct: 283 TNLQSLDLSHNKLSSLPAEIGQLTKLQFLNLKGNQLN 319
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 22 LFIDMRSLTE----LNLSYNQLTMLPV-CTDCKNLTHLLLG--------------FNKIN 62
L I R+ T+ L+LS N+LT+LP L L+LG NK++
Sbjct: 7 LLIIERAATQGCAGLDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIGNKLS 66
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L ++ NK+S + + +G L L L+LS N L+ +P E+ L L+
Sbjct: 67 KLPREIGL-LAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQ 125
Query: 123 SLFLGGNPIKTVRNDILQDSK 143
SL L N + ++ +I Q +K
Sbjct: 126 SLDLSFNQLSSLPAEIGQLAK 146
>gi|195482276|ref|XP_002101982.1| GE17919 [Drosophila yakuba]
gi|194189506|gb|EDX03090.1| GE17919 [Drosophila yakuba]
Length = 1256
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSLDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N+++E+S+ V L L+LS N+L +P L L
Sbjct: 229 NSLPKLP-DCVYNVVTLVRLNLSDNELTELSAGVELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 37.7 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+L ++ +D + N + M + L L QL +P + L HL L N
Sbjct: 3 VLPFVRGVDFTKNDFSATFPGSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHN 62
Query: 60 KINNMENDYFLTLTKLSLL---NLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ + F LT+LS L +L++N++ S + + L L LDLS N+L +VP
Sbjct: 63 RLEKI----FGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSNNQIESI 138
>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 354
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+LVS +P I +++L +L L NQ+T+LP +NL L L N
Sbjct: 201 LKNLQKLNLSENQLVS--IPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L L L+LKNN+++ + +G L NL L+L +N+LT++P E+ L
Sbjct: 259 QFTSLPKEID-KLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK 317
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
+L+ L L NP ++ ++++ + +D+ +GGG
Sbjct: 318 NLQRLELDSNPFSP------KEKEKVVKLLPNCEIDF-----EGGG 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L LK LDL N+L++ + + +++L +LNLS N+L +P KNL L L N+
Sbjct: 109 LKSLKNLDLFRNQLMTVPKEVML-LQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQ 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + L +L L L+NN+ V L NL L+LS+N+L +P E+ L +
Sbjct: 168 IVSLPKE-IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQN 226
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N I + ++LQ
Sbjct: 227 LRDLVLDRNQITILPTEVLQ 246
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+L L+ L+LS N+L +++P I +++L L L +NQ+ LP + + L L+L
Sbjct: 131 LLQTLEKLNLSLNRL--NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILEN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ N+ + L L L LNL N++ + + L NL L L N++T +P E+ L
Sbjct: 189 NRFKNVPGEA-LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ +I
Sbjct: 248 QNLQELYLSENQFTSLPKEI 267
>gi|126338397|ref|XP_001365516.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
4-like [Monodelphis domestica]
Length = 570
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGF-- 58
LS+L++LD S+N LV +LP+ +R+L +L L QL P+ CK L HL LLG
Sbjct: 100 LSNLQSLDFSNNPLVPTTLPVIAHLRALRQLRLYKIQLEKFPIQI-CKCLHHLELLGLSH 158
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ ++ + + TKL + L++N + L NL I+DL N + +P E+SSL
Sbjct: 159 NKLKDLPKE-IVNQTKLKEIYLQDNHFENFPQELCALYNLEIIDLEQNRIPVIPDEISSL 217
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRII 146
L+ F+ N + TV D L ++I
Sbjct: 218 TKLEKFFIASN-VVTVLPDSLGSCNKLI 244
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD----CKNLTHLLLG 57
L LK L L+ N + + + + SL +L L +Q T L ++ NL L L
Sbjct: 355 LVKLKALSLTGNNFMIFPEEVLL-IESLEQLYLGQDQGTKLTYISENIMKLTNLKELYLE 413
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + N+ D ++ L +L+ NN++ E+ ++ ++ L L L +N+LT +P ++
Sbjct: 414 NNSLENLP-DSLGSIKTLEMLDCHNNQLKELPDSICEISALKTLLLENNQLTALPLKMDE 472
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDS-KRIISHIKTSRL 154
L +L+ L L GNP++ ++L + I ++K RL
Sbjct: 473 LQNLQVLNLEGNPMEAPPPEVLHAGIEEIWKYLKERRL 510
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L LD+S+N L +LP + ++ + EL LS N + +P + HLL N
Sbjct: 243 LIVLDVSNNYL--HNLPSTLKELTEIRELGLSGNCMEKVPRLICKWTMLHLLYMKNTCLK 300
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
F L +++L+L N + L NL +L L DN + VP E+ +L LK+
Sbjct: 301 TLRRSFKRLLNVTILDLSQNYFEFFPQEICALKNLELLSLDDNRICQVPPEVVNLVKLKA 360
Query: 124 LFLGGN 129
L L GN
Sbjct: 361 LSLTGN 366
>gi|403260257|ref|XP_003922593.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Saimiri boliviensis boliviensis]
gi|403260259|ref|XP_003922594.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 2 [Saimiri boliviensis boliviensis]
gi|403260261|ref|XP_003922595.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 3 [Saimiri boliviensis boliviensis]
gi|403260263|ref|XP_003922596.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 4 [Saimiri boliviensis boliviensis]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
++L+ + L GN I+ + + + ++ S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPQLQSLQLDSNRLTY 294
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|301767140|ref|XP_002918990.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Ailuropoda melanoleuca]
gi|281341651|gb|EFB17235.1| hypothetical protein PANDA_007548 [Ailuropoda melanoleuca]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 208 LFKLTELHLEHNDLVKV 224
>gi|57098657|ref|XP_540204.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
isoform 1 [Canis lupus familiaris]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 208 LFKLTELHLEHNDLVKV 224
>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 315
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L LS+NQ T LP +NL HL L N
Sbjct: 75 LRNLQKLNLGSNRLTT--LPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + KL L L NN+++ + + L NL +L LS N LT +P E++ L
Sbjct: 133 RLTTLPEE-IAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L++ GN T +I Q K
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQK 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS N+L + LP I +RSL L + N+ T P T + L L LG N
Sbjct: 167 LQNLELLFLSGNRLTT--LPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + + L NL L LS N+LT +P E+ L
Sbjct: 225 QLTTLPKEIG-RLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQ 283
Query: 120 HLKSLFLGGNPI 131
+L++L L GNPI
Sbjct: 284 NLQTLILKGNPI 295
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L + LP I + L L L NQL LP T +NL L L N
Sbjct: 121 LQNLQHLDLNDNRLTT--LPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGN 178
Query: 60 KINNMEND---------------YFLT-------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ + + F T L KL L+L N+++ + +G L N
Sbjct: 179 RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L N+L +P E++ L +L++L L GN + T+ +I
Sbjct: 239 LKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279
>gi|449279097|gb|EMC86764.1| Leucine-rich repeat transmembrane neuronal protein 1 [Columba
livia]
Length = 521
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 105/189 (55%), Gaps = 8/189 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQALEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLWLRRNKVTIVVNTLDWI 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY-HCQNVDGGGMSSQESTSEINI 177
+ L+ + L GN I+ + + + + H+K+ +LD +D + S +S + I++
Sbjct: 256 WQLERMDLSGNEIEYIEPHVFES----VPHLKSLQLDSNRLTYIDSRVLDSWKSLTSISL 311
Query: 178 DKYKLDRTK 186
D ++
Sbjct: 312 SANSWDCSR 320
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS N++T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ +E D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 NLQALEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 208 LFKLTELHLEHNDLVKV 224
>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
Length = 565
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 101/183 (55%), Gaps = 22/183 (12%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L+TL LS N L S DSL + ++SL L+L +N+L +P V +LT L L F
Sbjct: 129 LTNLQTLALSENSLTSLPDSL---MSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRF 185
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ D LT L++L+L+ NKI E+ + +G L+NL D+S N L +P E+
Sbjct: 186 NRIRYVD-DEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQC 244
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLDY------HCQ-----NVDGGG 165
+L +L L N + + + I LQ R+ ++ +RL + +C+ NV+G
Sbjct: 245 INLSTLDLQHNELLDIPDTIGELQQLTRL--GLRYNRLSFIPSSLSNCRHMDEFNVEGNA 302
Query: 166 MSS 168
+S
Sbjct: 303 ISQ 305
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HN++ D +P +F + LT+LN+ NQLT LP+ N+ L LG
Sbjct: 338 FTNVDSINLEHNQI--DKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGT 395
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D L L +L L NN + + +VG+L L +LDL +N L +P E+ L
Sbjct: 396 NQLGKLPDD-IQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYL 454
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L + N + ++ I
Sbjct: 455 RDLQRLIVQSNQLTSLPRAI 474
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 52/202 (25%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCK------------ 49
+L TLDL HN+L+ +P I +++ LT L L YN+L+ +P ++C+
Sbjct: 246 NLSTLDLQHNELLD--IPDTIGELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAI 303
Query: 50 ------------------------------------NLTHLLLGFNKINNMENDYFLTLT 73
N+ + L N+I+ + F
Sbjct: 304 SQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAK 363
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L+ LN+K N+++ + +VG N+ L+L N+L +P ++ +L L+ L L N ++
Sbjct: 364 HLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRR 423
Query: 134 VRNDILQDSKRIISHIKTSRLD 155
+ + K + ++ +RL+
Sbjct: 424 IPPSVGNLRKLRVLDLEENRLE 445
>gi|193636577|ref|XP_001943281.1| PREDICTED: toll-like receptor 13-like [Acyrthosiphon pisum]
Length = 525
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 20/157 (12%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM---------------LPVCT 46
++ LK L +N + S + ++ +L EL++S+N L +P
Sbjct: 106 MASLKKLSFKYNNISSIANKALTNLPALEELDISFNSLNSHELRESVYRSYQRPNIPATN 165
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN----VGDLINLAILD 102
D L L LG+N I+++ ++F LTKL +L L NN + + N +G L NL +LD
Sbjct: 166 DEPALRVLKLGYNNIHSLPPNFFQYLTKLEMLELNNNPLLVIDQNTEISLGYLTNLQVLD 225
Query: 103 LSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDI 138
L++ ++DVP + S LF++++L+L GN + + I
Sbjct: 226 LANTGISDVPTDAFSQLFNVQTLYLNGNQFQNIPKGI 262
>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 402
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 33/158 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL++N+ +LP I +++L ELNL NQLT LP KNL L LG+N
Sbjct: 70 LQNLKSLDLANNQF--KTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLGYN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +S +G L NL +L L++N+LT +P E+ L
Sbjct: 128 QL------------------------TTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLK 163
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L++L LG N IK + N I Q + +++ LDY+
Sbjct: 164 NLQTLGLGNNQIKIIPNGIWQ-----LQNLQKLYLDYN 196
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL L N+L + LP I+ +++L L+L YNQLT LP +NL L L +N
Sbjct: 231 LKNLQTLHLGSNQLTT--LPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+++ + +G L NL LDL +N+LT +P E+ L
Sbjct: 289 QLTALPKEIG-QLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL L N + + +I Q
Sbjct: 348 NLKSLDLRNNQLTILPKEIGQ 368
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL +N+L + LP I +++L EL+L YNQLT LP +NL L L N
Sbjct: 254 LKNLQTLDLYYNQLTT--LPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+++ + +G L NL LDL +N+LT +P E+ L
Sbjct: 312 QLTTLPIEIG-QLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLK 370
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 371 NLQELYLNNN 380
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I+ +++L L L NQ+ ++P +NL L L +N
Sbjct: 139 LQNLKVLFLNNNQLTT--LPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L LNL NN++ + + L NL L L N+LT +P E+ L
Sbjct: 197 QIKTIPKEIG-QLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLK 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 256 NLQTLDLYYNQLTTLPQEIGQ 276
>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 438
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 27/162 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HL+ LDL NK+ LP I ++SL +LNLS+NQLT +P + ++L L LGFN
Sbjct: 82 LQHLQKLDLGFNKITV--LPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFN 139
Query: 60 -----------KINNMEN-----DYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
K+ N++ + +TL K L L L N+++ V +G+L
Sbjct: 140 HQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQ 199
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL LDL N+LT +P E+ L L+ L L N ++T+ +I
Sbjct: 200 NLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEI 241
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L HNKL + +P I +++SL L L N L LP +NL L L N
Sbjct: 267 LQNLKVLYLDHNKLAT--IPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVN 324
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L LNL +N+++ + +G L NL L L N+L +P E+ L
Sbjct: 325 ALTTLPKEIG-NLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQ 383
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L GNP+ + +I
Sbjct: 384 SLEYLNLNGNPLTSFPEEI 402
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++ L L+ KL + LP I +++L LNL NQLT +P + ++L L LGFNK
Sbjct: 37 TQVRVLYLNAKKLTA--LPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNK 94
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD------------------------LI 96
I + N+ L L LNL N+++ + +G+ L
Sbjct: 95 ITVLPNEIG-QLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQ 153
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
NL +D S N+L +P E+ L HL+ LFL N + TV +I LQ+ +R+
Sbjct: 154 NLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRL 204
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HL+ L L+ N+L + +P I ++++L L+L NQLT +P ++L L L FN
Sbjct: 175 LQHLQRLFLNFNQLTT--VPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFN 232
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N ++ + +G+L NL +L L N+L +P E+ +L
Sbjct: 233 QLRTIPKEIG-KLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQ 291
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L+ L L N + + +I LQ+ +R+
Sbjct: 292 SLQVLTLDRNLLAPLPKEIGKLQNLQRL 319
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
N+ T++ +L L K++ + +G L NL L+L DN+LT +P E+ L HL+ L
Sbjct: 30 NEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLD 89
Query: 126 LGGNPIKTVRNDILQ 140
LG N I + N+I Q
Sbjct: 90 LGFNKITVLPNEIGQ 104
>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
Length = 868
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
LS L+ LDLS NKL + +P I + +LT+L+LS N+LT +P NLT L L N
Sbjct: 45 LSQLEELDLSDNKLTT--VPESIGKLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGN 102
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT+L+ L+L N+++ V ++ L NL LDLS NELT VP L+ L
Sbjct: 103 ELTTVP-ESLTKLTQLTQLDLSVNELTTVPESLTKLTNLTQLDLSFNELTTVPESLTKLT 161
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L N + TV
Sbjct: 162 NLTELYLSDNQLTTV 176
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L++L LDLS N+L V +SL + LT+L+LS N+LT +P T NLT L L F
Sbjct: 91 LTNLTQLDLSGNELTTVPESL---TKLTQLTQLDLSVNELTTVPESLTKLTNLTQLDLSF 147
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + LT L+ L L +N+++ V ++ L NL +LDLSDN+LT VP L+ L
Sbjct: 148 NELTTVP-ESLTKLTNLTELYLSDNQLTTVPESLTKLTNLTLLDLSDNQLTTVPESLTKL 206
Query: 119 FHLKSLFLGGNPIKTV 134
+L L+L N + TV
Sbjct: 207 TNLTELYLSDNQLTTV 222
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 14/166 (8%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L+ L LDLS N+L V +SL + +LT+L+LS+N+LT +P T NLT L L
Sbjct: 114 LTQLTQLDLSVNELTTVPESL---TKLTNLTQLDLSFNELTTVPESLTKLTNLTELYLSD 170
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + LT L+LL+L +N+++ V ++ L NL L LSDN+LT VP L+ L
Sbjct: 171 NQLTTVP-ESLTKLTNLTLLDLSDNQLTTVPESLTKLTNLTELYLSDNQLTTVPESLTKL 229
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGG 164
+L L L NP++T +I+++ I DY Q ++ G
Sbjct: 230 TNLTELDLMVNPLETPPIEIVKNGIEAIR-------DYFRQLLEEG 268
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 37 NQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
+QLT +P+ + L L L NK+ + + LT L+ L+L NK++ V ++G L
Sbjct: 33 DQLTEIPIEVFNLSQLEELDLSDNKLTTVP-ESIGKLTNLTQLDLSINKLTTVPESIGKL 91
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
NL LDLS NELT VP L+ L L L L N + TV
Sbjct: 92 TNLTQLDLSGNELTTVPESLTKLTQLTQLDLSVNELTTV 130
>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 377
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 47 KVRILDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 104
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L NN+++ + +G L L L L N+LT +P E+ L +L
Sbjct: 105 KTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNL 163
Query: 122 KSLFLGGNPIKTVRNDI 138
KSL L N IKT+ +I
Sbjct: 164 KSLNLSYNQIKTIPKEI 180
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 114 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 172 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 231 NLQDLYLVSNQLTILPNEIGQ 251
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 183 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 241 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 299
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L LG N + T+ I Q
Sbjct: 300 NLQTLNLGSNQLTTLPEGIGQ 320
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 205 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 262
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L LNL +N+++ + +G L
Sbjct: 263 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLK 322
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 323 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 365
>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
impatiens]
Length = 610
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TL LS N L S LP ++ ++SL L+L +N+L+ +P V NLT L L FN
Sbjct: 174 LGNLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G L+NL D+S N L +P E+ +
Sbjct: 232 RVRYV-SDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCV 290
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 291 QLSTLDLQHN 300
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+++ +++L HNK+ +F ++L +LN+ NQLT LP+ N+ L LG N+
Sbjct: 383 FTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQ 442
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +D L L +L L NN + + +++ +L L +LDL +N++ +P E+ L
Sbjct: 443 LTKIPDD-IQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRD 501
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 502 LQKLILQSNQVTSLPRAI 519
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L TLDL HN+L + D++ + SLT L L YN+LT +P +CK + + N+
Sbjct: 291 QLSTLDLQHNELLDIPDTIGRLV---SLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQ 347
Query: 61 INNMENDYFLTLTKLSL------------------------LNLKNNKISEVSSNV-GDL 95
++ + + +L+ L+ +NL++NKI ++ +
Sbjct: 348 VSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRA 407
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NLA L++ +N+LT +P ++ + ++ L LG N + + +DI
Sbjct: 408 KNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDI 450
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
+L L++ N+L + LPL I ++ ELNL NQLT +P C +NL L+L N +
Sbjct: 409 NLAKLNMKENQLTA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLL 466
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ L KL +L+L+ NKI + + +G L +L L L N++T +P + L +L
Sbjct: 467 KRIPAS-IANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNL 525
Query: 122 KSLFLGGN 129
L +G N
Sbjct: 526 TYLSVGEN 533
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 355 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLN 414
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N+++ + ++G +N+ L+L N+LT +P ++ L +L+ L L N +K + I
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASI 473
>gi|195555638|ref|XP_002077155.1| GD24888 [Drosophila simulans]
gi|194202809|gb|EDX16385.1| GD24888 [Drosophila simulans]
Length = 1125
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N+++E+++ V L L+LS N+L +P L L
Sbjct: 229 NSLPKLP-DCVYNVVTLVRLNLSDNELTELTAGVELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 37.7 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+L ++ +D + N + M + L L QL +P + L HL L N
Sbjct: 3 VLPFVRGVDFTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHN 62
Query: 60 KINNMENDYFLTLTKLSLL---NLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ + F LT+LS L +L++N++ S + + L L LDLS N+L +VP
Sbjct: 63 RLEKI----FGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSNNQIESI 138
>gi|432851788|ref|XP_004067085.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4-like [Oryzias latipes]
Length = 842
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L L++L L N + + F ++ L L L N LT +PV T NL L L N
Sbjct: 127 LQSLQSLRLDANHITTVPDESFQGLQQLRHLWLDDNHLTQVPVGSLTHQANLQALTLALN 186
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSL 118
+I + + F LT L +L+L NN+I E++SN L+NL LDL+ N L P + +L
Sbjct: 187 RITYIPANAFANLTSLVVLHLHNNRIREIASNSFAGLVNLETLDLNFNNLMVFPKPIEAL 246
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N I ++
Sbjct: 247 PKLKELGFHSNGISSI 262
>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 315
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L LS+NQ T LP +NL HL L N
Sbjct: 75 LRNLQKLNLGSNRLTT--LPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + KL L+L NN+++ + + L NL +L LS N LT +P E++ L
Sbjct: 133 RLTTLPEE-IAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L++ GN T +I Q K
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQK 215
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS N+L + LP I +RSL L + N+ T P T + L L LG N
Sbjct: 167 LQNLELLFLSGNRLTT--LPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + + L NL L LS N+LT +P E+ L
Sbjct: 225 QLTTLPKEIG-RLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQ 283
Query: 120 HLKSLFLGGNPI 131
+L++L L GNPI
Sbjct: 284 NLQTLILKGNPI 295
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L + LP I + L L+L NQL LP T +NL L L N
Sbjct: 121 LQNLQHLDLNDNRLTT--LPEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGN 178
Query: 60 KINNMEND---------------YFLT-------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ + + F T L KL L+L N+++ + +G L N
Sbjct: 179 RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L N+L +P E++ L +L++L L GN + T+ +I
Sbjct: 239 LKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279
>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 315
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L LS+NQ T LP +NL HL L N
Sbjct: 75 LRNLQKLNLGSNRLTT--LPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + KL L L NN+++ + + L NL +L LS N LT +P E++ L
Sbjct: 133 RLTTLPEE-IAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L++ GN T +I Q K
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQK 215
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS N+L + LP I +RSL L + N+ T P T + L L LG N
Sbjct: 167 LQNLELLFLSGNRLTT--LPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + + L NL L LS N+LT +P E+ L
Sbjct: 225 QLTTLPKEIG-RLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQ 283
Query: 120 HLKSLFLGGNPI 131
+L++L L GNPI
Sbjct: 284 NLQTLILKGNPI 295
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L + LP I + L L L NQL LP T +NL L L N
Sbjct: 121 LQNLQHLDLNDNRLTT--LPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGN 178
Query: 60 KINNMEND---------------YFLT-------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ + + F T L KL L+L N+++ + +G L N
Sbjct: 179 RLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQN 238
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L N+L +P E++ L +L++L L GN + T+ +I
Sbjct: 239 LKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279
>gi|395132311|dbj|BAM29306.1| leucine-rich repeat-containing G protein-coupled receptor 4
[Oryzias latipes]
Length = 844
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L L++L L N + + F ++ L L L N LT +PV T NL L L N
Sbjct: 127 LQSLQSLRLDANHITTVPDESFQGLQQLRHLWLDDNHLTQVPVGSLTHQANLQALTLALN 186
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSL 118
+I + + F LT L +L+L NN+I E++SN L+NL LDL+ N L P + +L
Sbjct: 187 RITYIPANAFANLTSLVVLHLHNNRIREIASNSFAGLVNLETLDLNFNNLMVFPKPIEAL 246
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N I ++
Sbjct: 247 PKLKELGFHSNGISSI 262
>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
Length = 610
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TL LS N L S LP ++ ++SL L+L +N+L+ +P V NLT L L FN
Sbjct: 174 LGNLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G LINL D+S N L +P E+ +
Sbjct: 232 RVRYV-SDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCV 290
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 291 QLSTLDLQHN 300
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HNK+ D +P +F ++L +LN+ NQLT LP+ N+ L LG
Sbjct: 383 FTNVYSINLEHNKI--DKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGT 440
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D L L +L L NN + + +++ +L L +LDL +N++ +P E+ L
Sbjct: 441 NQLTKIPDD-IQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFL 499
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 500 RDLQKLILQSNQVTSLPRAI 519
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
+L L++ N+L + LPL I ++ ELNL NQLT +P C +NL L+L N +
Sbjct: 409 NLAKLNMKENQLTA--LPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLL 466
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ L KL +L+L+ NKI + + +G L +L L L N++T +P + L +L
Sbjct: 467 KRIPAS-IANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNL 525
Query: 122 KSLFLGGN 129
L +G N
Sbjct: 526 TYLSVGEN 533
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 355 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLN 414
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N+++ + ++G IN+ L+L N+LT +P ++ L +L+ L L N +K + I
Sbjct: 415 MKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASI 473
>gi|195131791|ref|XP_002010329.1| GI14741 [Drosophila mojavensis]
gi|193908779|gb|EDW07646.1| GI14741 [Drosophila mojavensis]
Length = 1253
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL LN+S Q T+L P D NL L +
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLNMSNTQRTLLNFPTSIDSLANLVELDISH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N+I+E+SS++ L L+LS N+LT +P L L
Sbjct: 229 NALPKLP-DCVYNVATLVRLNLSDNEITELSSSLDQWQRLESLNLSRNQLTVLPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ LF+ N +
Sbjct: 288 SRLRRLFVNDNKL 300
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L L++LDL HN+L + +P LF + LT L+LS+N+L +P + K+L L L
Sbjct: 74 LPCLRSLDLRHNQLKNSGIPPELF-QLEELTTLDLSHNRLKEVPEGLERAKSLIVLNLSA 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NQIESIPPALFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 492
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDLSHN+L LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 229 LQNLHELDLSHNQLTI--LPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 287 QIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 345
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 346 NLQDLYLVSNQLTILPNEIGQ 366
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +++L L L YNQLT LP KNL L L N
Sbjct: 68 LQNLKLLDLGHNQLT--ALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS N+LT +P E+ L
Sbjct: 126 QLTTLPTE-IRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLE 184
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L + + T+ +I
Sbjct: 185 NLQLLSLYESQLTTLPKEI 203
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+ L LS KL + LP I +++L L+L +NQLT LP KNL L+L +N++
Sbjct: 49 RVLILSEQKLTT--LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTA 106
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L +L L NN+++ + + + L NL +LDL +N+LT +P E+ L +L+
Sbjct: 107 LPKEIG-QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165
Query: 124 LFLGGNPIKTVRNDI 138
L+L N + T+ +I
Sbjct: 166 LYLSYNQLTTLPKEI 180
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 298 LQKLQSLYLPNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 355
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 356 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 414
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 415 NLQVLDLGSNQLTTLPEGIGQ 435
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+L LP I +++L EL LSYNQLT LP +NL L L +
Sbjct: 137 LKNLQMLDLGNNQLTI--LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYES 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL+L ++++ + +G L NL LDLS N+LT +P E+ L
Sbjct: 195 QLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQ 253
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L+ L+L N + T+ +I Q + ++K+ L Y+
Sbjct: 254 KLQWLYLPKNQLTTLPQEIGQ-----LKNLKSLNLSYN 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 32/168 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L N
Sbjct: 321 LQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 378
Query: 60 K-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I ++N L L L +L+L +N+++ + +G L N
Sbjct: 379 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKN 438
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 439 LQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 480
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 24 IDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+D+R L LS +LT LP +NL L LG N++ + + L L LL L
Sbjct: 46 LDVRVLI---LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG-QLKNLQLLILYY 101
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
N+++ + +G L NL +L L++N+LT +P E+ L +L+ L LG N + + +I Q
Sbjct: 102 NQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQ 159
>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
Length = 527
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LS+LKTL L+ N L S DSL +++ L L+L +N+L+ +P V LT L L F
Sbjct: 91 LSNLKTLALNENSLTSLPDSLQ---NLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRF 147
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L+ L++L+L+ NKI E+ S +G L+NL LDLS N L +P E+ +
Sbjct: 148 NRIK-VVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNC 206
Query: 119 FHLKSLFLGGN 129
+L +L L N
Sbjct: 207 VNLTALDLQHN 217
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
+++ ++++ HN++ +F + LT+LN+ N LT LP+ + L G N +
Sbjct: 301 TNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSL 360
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +D L L +L L NN + + + +G+L L +LDL +N L +P E+ L L
Sbjct: 361 TKLPDDIH-CLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDL 419
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + ++ I
Sbjct: 420 QKLILQSNQLTSLPRTI 436
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
+H+ ++ N + L + +LT + LS N P + N+T + + N+
Sbjct: 253 THMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQ 312
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ ++ F L+ LN+K N ++ + ++G + L+ N LT +P ++ L +
Sbjct: 313 IDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQN 372
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+ L L N +K + N I K + ++ +RL+
Sbjct: 373 LEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLE 407
>gi|344283999|ref|XP_003413758.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Loxodonta africana]
Length = 522
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSNNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPHLQSLQLD 288
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSNN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 354
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L+S +P I +++L +L L NQ+T+LP +NL L L N
Sbjct: 201 LKNLQKLNLSENQLIS--IPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L L L+LKNN+++ + +G L NL L+L +N+LT++P E+ L
Sbjct: 259 QFTSLPKEID-KLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK 317
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
+L+ L L NP ++ ++++ + +D+ +GGG
Sbjct: 318 NLQRLELDSNPFSP------KEKEKVVKLLPNCEIDF-----EGGG 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L LK LDL N+L++ + + +++L +LNLS N+L +P KNL L L N+
Sbjct: 109 LKSLKNLDLFRNQLMTVPKEVML-LQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQ 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + L +L L L+NN+ V L NL L+LS+N+L +P E+ L +
Sbjct: 168 IVSLPKE-IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEILQLQN 226
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N I + ++LQ
Sbjct: 227 LRDLVLDRNQITILPTEVLQ 246
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+L L+ L+LS N+L +++P I +++L L L +NQ+ LP + + L L+L
Sbjct: 131 LLQTLEKLNLSLNRL--NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILEN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ N+ + L L L LNL N++ + + L NL L L N++T +P E+ L
Sbjct: 189 NRFKNVPGEA-LQLKNLQKLNLSENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQL 247
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ +I
Sbjct: 248 QNLQELYLSENQFTSLPKEI 267
>gi|395528204|ref|XP_003766221.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4,
partial [Sarcophilus harrisii]
Length = 558
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGF-- 58
L++L++LDLS N LV SL + +RSL +L L Q+ P+ CK L HL LLG
Sbjct: 99 LTNLQSLDLSGNPLVPSSLLILSHLRSLRQLRLYKVQMENFPIQI-CKCLHHLELLGLSH 157
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ ++ + + TKL + L+NN E + L NL ILDL N+++ +P E+S+L
Sbjct: 158 NKLKSLPKE-IVNQTKLKEIYLQNNNFEEFPQELCVLYNLEILDLEQNQISFIPDEISAL 216
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRII 146
+L+ F+ N I + + + SK ++
Sbjct: 217 INLEKFFIASNCIPLLPDTLGSCSKLMV 244
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLP---LFIDMRSLTELNLSYNQ---LTMLP-VCTDCKNLTHL 54
L LK L L+ N + P L ID SL EL + +Q +T LP NL L
Sbjct: 354 LVKLKGLSLTGNNF--SAFPEEILLID--SLEELYMGQDQGAKITSLPETILKLTNLKEL 409
Query: 55 LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
N ++++ +L L +L+ NN+I+E+ ++ L L L+L +N LT +P
Sbjct: 410 YFENNSLDSLPVG-LCSLKNLKILDFHNNQITELPDSISQLTGLKTLNLENNLLTILPER 468
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSR 153
+ SL HL+ L L GNP++ +I + D I ++K R
Sbjct: 469 MDSLEHLEVLNLEGNPMQDPSPEICRLDIPEIWQYLKDKR 508
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L L +L ++L+NN I ++ + L NL IL L++NE+ + +L L +L+SL L GN
Sbjct: 51 LELWELEEVHLENNVIEGIAKEIRGLTNLKILYLNNNEIRLICKDLGELTNLQSLDLSGN 110
Query: 130 PIKTVRNDILQDSKRIISHIKTSR 153
P ++ S I+SH+++ R
Sbjct: 111 P-------LVPSSLLILSHLRSLR 127
>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
Length = 487
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK LDL N+L S +P + + SL L L +N+LT +P +L L + N
Sbjct: 135 LTALKGLDLQKNQLTS--VPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ +M + + LT L L L++N+++ + + +G L L L L+DNELT +P E+ L
Sbjct: 193 QLTSMPAEIW-RLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLT 251
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L GN + +V +I Q
Sbjct: 252 SLRGLYLYGNQLTSVPAEIGQ 272
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S LP I + SL L L NQLT +P +L L LG N
Sbjct: 43 LASLTELYLEDNQLTS--LPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKN 100
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L LL L NN++S V + +G L L LDL N+LT VP E+ L
Sbjct: 101 QLTSVPAEIG-QLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLT 159
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + +V +I Q
Sbjct: 160 SLEALRLQHNRLTSVPAEIGQ 180
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL EL L NQLT +P +L L L N
Sbjct: 250 LTSLRGLYLYGNQLTS--VPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGN 307
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L+L N ++ + + +G L++L +LDL DN L VP E+ L
Sbjct: 308 QLTSVPAEIG-QLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLR 366
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKR 144
L+ LFL GN + +V +I Q + R
Sbjct: 367 SLRELFLNGNLLTSVPAEIGQLTVR 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L HN+L S +P I + SL +L ++ NQLT +P +L L L N
Sbjct: 158 LTSLEALRLQHNRLTS--VPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L L +N+++ + + +G L +L L L N+LT VP E+ L
Sbjct: 216 RLTSLPAEIG-QLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLM 274
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L GN + +V +I Q
Sbjct: 275 SLRELYLQGNQLTSVPAEIGQ 295
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
LNLS NQLT +P +L L L N++ ++ + L L+ L L++N+++ + +
Sbjct: 3 LNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIG-RLASLTELYLEDNQLTSLPA 61
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+G L +L L L DN+LT VP E+ L L L+LG N + +V +I Q
Sbjct: 62 EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQ 111
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDL N+L S +P I +RSL EL L+ N LT +P + L L N+
Sbjct: 342 LMSLRLLDLDDNRLAS--VPAEIGQLRSLRELFLNGNLLTSVPAEIGQLTVRELYLENNQ 399
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + L L LNL NK++ V + +G L +L L L+ N+LT VP E+ L
Sbjct: 400 LTSVPAEVG-QLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTS 458
Query: 121 LKSLFLGGNPIKTVR 135
L+ LFL +R
Sbjct: 459 LRLLFLSSGEPAAIR 473
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L LDLS+N L S LP I + SL L+L N+L +P ++L L L N
Sbjct: 319 LTFLGCLDLSYNYLTS--LPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGN 376
Query: 60 KINNMENDYF-LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ ++ + LT+ +L L +NN+++ V + VG L L L+LS N+LT VP E+ L
Sbjct: 377 LLTSVPAEIGQLTVRELYL---ENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLL 433
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN + +V +I Q
Sbjct: 434 TSLRWLLLNGNQLTSVPGEIGQ 455
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL N+++ V + +G L +L L L+DN+LT VP E+ L L L+L N + ++
Sbjct: 2 VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61
Query: 137 DILQ 140
+I Q
Sbjct: 62 EIGQ 65
>gi|153876005|ref|ZP_02003544.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067531|gb|EDN66456.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 307
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD--CKNLTHLLLGFN 59
LS L+ LDLS N+L +D + M LT+LNLS N+LT LP +L + L N
Sbjct: 152 LSQLRKLDLSGNQL-TDISSVISQMTQLTKLNLSDNRLTDLPATLSQLAASLKDIDLSIN 210
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + F L KL L + N I ++ S +G L L LD+ +N LT++P +S L
Sbjct: 211 DFGEIPSVIF-QLFKLKELCISENHIEDLPSKIGKLCALEWLDVRNNLLTNLPASISQLI 269
Query: 120 HLKSLFLGGNPIKTVR 135
HL+ L L GNP+ R
Sbjct: 270 HLEWLLLEGNPLPIPR 285
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L++L L N+L +D P I + L +L+++ NQL +LP + L+ L ++
Sbjct: 37 LFQLESLSLEGNQL-TDIPPEIIYLSQLKQLDINNNQLVILP--AEIGQLSQL----ERL 89
Query: 62 NNMENDYFL------TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N EN + LTKL +N +N++ + S + L+NL LDLS N+ + E+
Sbjct: 90 NADENQLVMLPSDIGKLTKLKTVNFSSNQLIALPSTISHLVNLEELDLSYNKFISLQPEI 149
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQ 140
+ L L+ L L GN + + + I Q
Sbjct: 150 AQLSQLRKLDLSGNQLTDISSVISQ 174
>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Monodelphis domestica]
Length = 598
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD + N L +++P +M SL L L N+L LP C L L +G N+
Sbjct: 214 MKRLKHLDCTSNYL--ETIPSELANMESLELLYLRRNKLRFLPEFPSCMLLKELHIGENQ 271
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + L + +L+L++NK+ + + L L LDL++N++ +P L +L H
Sbjct: 272 IEEITAGHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRSLPHILGTLPH 331
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
LK L L GNP++T+R ++L + ++ ++ ++++
Sbjct: 332 LKFLALEGNPLRTIRRELLNKGTQEVLKYLRS 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L MLP T +NL L L +
Sbjct: 98 LLPALTILDMHDNQLTS--LPCAIGELENLQKLNVSHNKLKMLPEELTKLRNLKVLFLQY 155
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L KL L+L NN+++ V ++ L L L+L+ N++ ++P E++ +
Sbjct: 156 NELTCVP-EGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMKNLPAEITRM 214
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++T+ +++
Sbjct: 215 KRLKHLDCTSNYLETIPSEL 234
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
L L +S+NKL +SD L L + +LT L++ NQLT LP + +NL L + NK+
Sbjct: 79 LTKLIISNNKLQSLSDDLRL---LPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKL 135
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
M + L L +L L+ N+++ V G L L LDLS+N LT VP SSL L
Sbjct: 136 K-MLPEELTKLRNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKL 194
Query: 122 KSLFLGGNPIKTVRNDI 138
L L N +K + +I
Sbjct: 195 MKLNLASNQMKNLPAEI 211
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 27/134 (20%)
Query: 8 LDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNME 65
LD+ +N L S LP ++ S L +NLS+N+L P V + L +LLG N++ +++
Sbjct: 473 LDIRNNLLTS--LPEEMEALSRLQTINLSFNRLQAFPCVLYRLRTLETVLLGNNQLGSVD 530
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
L L ++ LA LDL +N+L VP EL + L++L
Sbjct: 531 P---LRLQQMD--------------------RLATLDLQNNDLLHVPPELGNCVSLRTLL 567
Query: 126 LGGNPIKTVRNDIL 139
L GNP +T R IL
Sbjct: 568 LEGNPFRTPRAAIL 581
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 2 LSHLKTLDLSHNK--LVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
++ LK LD S K L+ D + I ++T +N + N L +P + + + LG
Sbjct: 394 MTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIVELKATVCDVNLG 453
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
FNK++ + + L KL L+++NN ++ + + L L ++LS N L PC L
Sbjct: 454 FNKLSCISAE-LCALHKLIHLDIRNNLLTSLPEEMEALSRLQTINLSFNRLQAFPCVLYR 512
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
L L+++ LG N + +V LQ R+ +
Sbjct: 513 LRTLETVLLGNNQLGSVDPLRLQQMDRLAT 542
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
++ + T L+ L + NNK+ +S ++ L L ILD+ DN+LT +PC + L +L+ L
Sbjct: 70 SERWWEQTDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLN 129
Query: 126 LGGNPIKTVRNDI 138
+ N +K + ++
Sbjct: 130 VSHNKLKMLPEEL 142
>gi|440793969|gb|ELR15140.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 708
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLT--MLPVCTDCKNLTHLLLGF 58
L L+ L +++N+L + LP I + L ELNL+ N L + P C L + L
Sbjct: 328 LGALEKLSVANNRLTT--LPPQIGCLSRLEELNLNGNPLVQGLPPEVGACSALEVMDLSA 385
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ + +D+ L LT+L LNL +N+++++ VG + L LDLSDN L+D+P L
Sbjct: 386 CQLTVLPDDFTL-LTRLMELNLASNRLAQLPQAVGRMTRLVRLDLSDNRLSDLPLSAGHL 444
Query: 119 FHLKSLFLGGNPIKTVR 135
L++L + GNPI+ R
Sbjct: 445 TGLQTLMVQGNPIRNQR 461
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
GFNK+ + L L +L+++ N+++ +S++VG L L L L+ N+L +P ++
Sbjct: 269 GFNKLKSFPQ--LTPLVCLEVLHMEGNQMTSLSASVGRLTRLRELHLNGNQLVALPDTIA 326
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
L L+ L + N + T+ I
Sbjct: 327 KLGALEKLSVANNRLTTLPPQI 348
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 35 SYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD 94
+N+L P T L L + N++ ++ LT+L L+L N++ + +
Sbjct: 269 GFNKLKSFPQLTPLVCLEVLHMEGNQMTSLSASVG-RLTRLRELHLNGNQLVALPDTIAK 327
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L +++N LT +P ++ L L+ L L GNP+
Sbjct: 328 LGALEKLSVANNRLTTLPPQIGCLSRLEELNLNGNPL 364
>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 398
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L LSHNKL SLP I+ ++ L EL+L YNQLT LP + K L L L +N
Sbjct: 85 LKELQVLHLSHNKLT--SLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L +L +L+L +N+++ + +G L L +L L DN+LT +P E+ L
Sbjct: 143 QLTTLPKEIGY-LKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLK 201
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 202 ELQVLHLYDNQLTTLPKEI 220
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L++N+L +LP I +++L LNLS+N+LT LP +NL L L N
Sbjct: 223 LQNLQVLELTNNQL--KTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNN 280
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L +L +L L NN++ + +G L NL +L+LS N+LT +P ++ L
Sbjct: 281 QLTTLPKDIGY-LKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ 339
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ DI
Sbjct: 340 NLQELYLTNNQLTTLPKDI 358
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L+LSHNKL + LP I +++L EL L+ NQLT LP K L L L N
Sbjct: 246 LQNLQVLNLSHNKLTT--LPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNN 303
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +NK++ + ++G L NL L L++N+LT +P ++ L
Sbjct: 304 QLKTLPKEIG-QLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLK 362
Query: 120 HLKSLFLGGNP 130
L+ L L P
Sbjct: 363 ELQILHLDDIP 373
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I ++ L L+L NQLT LP +NL L L N
Sbjct: 177 LKELQVLHLYDNQLTT--LPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNN 234
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +NK++ + +++G L NL L L++N+LT +P ++ L
Sbjct: 235 QLKTLPKEIG-QLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLK 293
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N +KT+ +I Q
Sbjct: 294 ELQILELTNNQLKTLPKEIGQ 314
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + +L+LK+N+++ + ++G L NL +LDL++N+LT +P E+ L L+ L L N +
Sbjct: 40 TDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLT 99
Query: 133 TVRNDI 138
++ DI
Sbjct: 100 SLPKDI 105
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L +L+L NN+++ + + L L +L LS N+LT +P ++ L L+ L L N +
Sbjct: 62 LQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQL 121
Query: 132 KTVRNDI 138
T+ DI
Sbjct: 122 TTLPKDI 128
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 26/135 (19%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDL N+L + LP I +++L L+L+ NQLT LP K + HL
Sbjct: 42 VRILDLKSNQLTT--LPKDIGQLQNLQVLDLTNNQLTALP-----KEIEHL--------- 85
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+L +L+L +NK++ + ++ L L L L N+LT +P ++ L L+
Sbjct: 86 ---------KELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQE 136
Query: 124 LFLGGNPIKTVRNDI 138
L L N + T+ +I
Sbjct: 137 LHLDYNQLTTLPKEI 151
>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L++L+L +N+L S + ++ + SL L L NQLT +P +L L L N+
Sbjct: 51 LASLESLELGYNELTSVPVEIW-QLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANR 109
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT L+ L+L++N+++ V + + L +L L+L+DN+LT VP E+ L
Sbjct: 110 LTSVPTEIG-QLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTS 168
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + +V +I Q
Sbjct: 169 LRELWLSANHLTSVPAEIWQ 188
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L+ N+L S +P I + SL EL LS N LT +P L L + N
Sbjct: 143 LTSLTYLNLNDNQLTS--VPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTEN 200
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + LT L+ L L N+++ V + +G L +L L L DN+LT VP E+ +
Sbjct: 201 QLTSVPAEIW-QLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIR 259
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L GN + ++ +I Q
Sbjct: 260 SLVKLSLHGNRLTSLPAEIGQ 280
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 23/138 (16%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYF--------------L 70
+ +L +LNL NQLT+LP +L L LG+N++ ++ + + L
Sbjct: 28 LSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLGGNQL 87
Query: 71 T--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
T LT L L+L+ N+++ V + +G L +L LDL DN+LT VP E+ L L
Sbjct: 88 TSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLT 147
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + +V +I Q
Sbjct: 148 YLNLNDNQLTSVPAEIRQ 165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L L ++ N+L S ++ + SLTEL L NQLT +P +LT L L N+
Sbjct: 189 LAALVKLSVTENQLTSVPAEIW-QLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQ 247
Query: 61 INNM--ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ ++ E +L KLSL N+++ + + +G L L +L N LT VP E+ L
Sbjct: 248 LTSVPAEIGQIRSLVKLSL---HGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHL 304
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L L L GN + +V ++I Q
Sbjct: 305 TSLTELSLHGNQLTSVPSEIGQ 326
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I + SLT L+L NQLT +P ++L L L N
Sbjct: 212 LTSLTELYLHGNQLTS--VPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGN 269
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L N ++ V + +G L +L L L N+LT VP E+ L
Sbjct: 270 RLTSLPAEIG-QLRALVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLT 328
Query: 120 HLKSLFLGGNPIKTV 134
L L L GN + +V
Sbjct: 329 SLGELSLSGNQLTSV 343
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I +RSL +L+L N+LT LP + L L N
Sbjct: 235 LTSLTALSLYDNQLTS--VPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRN 292
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ ++ + LT L+ L+L N+++ V S +G L +L L LS N+LT VP + L
Sbjct: 293 LLTSVPAEIG-HLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMREL 350
>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 399
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 24/153 (15%)
Query: 2 LSHLKTLDLSHNKL----------------------VSDSLPLFIDMRSLTELNLSYNQL 39
L HLK L LSHN+L ++ P F ++ L ++NLS+N++
Sbjct: 229 LEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRI 288
Query: 40 TMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
T P+ T L L L N++ ++ + L +L +L+L +N++ ++ ++G L NL
Sbjct: 289 TTFPIAITKLTQLKSLALDSNQLTSLPANVG-NLEQLEVLSLNDNQLIKLPKSIGKLTNL 347
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L +N+LTDVP E+ +L +L+ L L GNPI
Sbjct: 348 TTLSLINNKLTDVPIEIQNLPNLEYLVLEGNPI 380
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L HL L+L HN L+ LP I +++L L L+ N+L +LP +NL +L N
Sbjct: 137 LEHLGILNLGHNDLIE--LPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L++ N ++ V ++G+L +L L LS N LT +P ++ L
Sbjct: 195 RLQSIPEEIG-QLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLK 253
Query: 120 HLKSLFL 126
LK L+L
Sbjct: 254 TLKDLYL 260
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L L +S NK+ + LP ID ++ L EL ++N L LP K L L L N
Sbjct: 45 LPGLLVLGVSGNKI--EVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHN 102
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L L +N+++ + ++G L +L IL+L N+L ++P +S L
Sbjct: 103 HLTKLP-ESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQ 161
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LKSL+L N + + I
Sbjct: 162 NLKSLYLNKNKLAVLPESI 180
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L +HN L +LP I ++ L EL L++N LT LP + +L L L N
Sbjct: 68 LQQLEELWFNHNHL--HTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKN-----------------------NKISEVSSNVGDLI 96
++ + + L L +LNL + NK++ + ++G L
Sbjct: 126 QLTVLP-ESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQ 184
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRL 154
NL LD N L +P E+ L +LK L + GN + V I L+ K + H+ +RL
Sbjct: 185 NLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKEL--HLSHNRL 242
Query: 155 DY 156
+
Sbjct: 243 TF 244
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 28/133 (21%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNME 65
++D +H +V +S+ ++ L EL+LS+N+LT LP K L L L +NK+ +
Sbjct: 213 SVDGNHLAVVPESIG---ELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLP 269
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ G L +L ++LS N +T P ++ L LKSL
Sbjct: 270 PGF------------------------GKLQHLKDINLSHNRITTFPIAITKLTQLKSLA 305
Query: 126 LGGNPIKTVRNDI 138
L N + ++ ++
Sbjct: 306 LDSNQLTSLPANV 318
>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
mellifera]
Length = 565
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TL LS N L S LP ++ ++SL L+L +N+L+ +P V NLT L L FN
Sbjct: 129 LGNLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFN 186
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G LINL D+S N L +P E+ +
Sbjct: 187 RVRYV-SDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCV 245
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 246 QLSTLDLQHN 255
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HNK+ D +P +F ++L +LN+ NQLT LP+ N+ L LG
Sbjct: 338 FTNVYSINLEHNKI--DKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGT 395
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D L L +L L NN + + +++ +L L +LDL +N++ +P E+ L
Sbjct: 396 NQLTKIPDD-IQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFL 454
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 455 RDLQKLILQSNQVTSLPRAI 474
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 310 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLN 369
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N+++ + ++G IN+ L+L N+LT +P ++ L +L+ L L N +K + I
Sbjct: 370 MKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASI 428
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
+L L++ N+L + LPL I ++ ELNL NQLT +P C +NL L+L N +
Sbjct: 364 NLAKLNMKENQLTA--LPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLL 421
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ L KL +L+L+ NKI + + +G L +L L L N++T +P + L +L
Sbjct: 422 KRIPAS-IANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNL 480
Query: 122 KSLFLGGN 129
L +G N
Sbjct: 481 TYLSVGEN 488
>gi|126656423|ref|ZP_01727684.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
gi|126622109|gb|EAZ92816.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
Length = 830
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 5/135 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
K+L LS KL S LP I + +LT L++ NQLT LP + NLT L L N++ N
Sbjct: 19 KSLSLSFKKLTS--LPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLTN 76
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ ++ LTKL++ L+ N+++ + S +G+L NL L LS N+LT++P E+ +L+ L S
Sbjct: 77 LPSE-IGNLTKLNIFYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNLPPEIGNLYDLTS 135
Query: 124 LFLGGNPIKTVRNDI 138
L+L N + + +I
Sbjct: 136 LYLENNQLTNLPREI 150
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPV-CTDCKNLTHLLLG 57
L +L +L L N+L + LP ++ +LT+LN+ Y NQLT LP + NLT L L
Sbjct: 61 LYNLTSLYLEKNQLTN--LP--SEIGNLTKLNIFYLEKNQLTNLPSEIGNLYNLTSLHLS 116
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ N+ + L L+ L L+NN+++ + +G L L L LS N+LT++P E+ +
Sbjct: 117 GNQLTNLPPE-IGNLYDLTSLYLENNQLTNLPREIGKLHKLTSLYLSGNQLTNLPPEIGN 175
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD-----------GGGM 166
L +L SL + N I + +I + R I + +L+ QN+D GG
Sbjct: 176 LDNLISLVIRNNQITNLPPEIERKKTRAIINFYKQQLE---QNIDHLYEAKLLIVGEGGA 232
Query: 167 SSQESTSEINIDKYKL 182
+I D Y+L
Sbjct: 233 GKTTLAQKIKDDNYQL 248
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 47/77 (61%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L+L K++ + +G L NL L + N+LT++P E+ +L++L SL+L N + + ++
Sbjct: 21 LSLSFKKLTSLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLTNLPSE 80
Query: 138 ILQDSKRIISHIKTSRL 154
I +K I +++ ++L
Sbjct: 81 IGNLTKLNIFYLEKNQL 97
>gi|124005189|ref|ZP_01690031.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123989441|gb|EAY29002.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 292
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L+ LDLS N L + LP F ++ L +L+L+ NQL+ LP CK LT L L N+++
Sbjct: 117 LEQLDLSANGLAT--LPDDFGNLSKLKQLSLADNQLSQLPDSFKKCKQLTELNLSNNQLH 174
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
LTKL LNL NN ++++ + +G L L L+LS N LTD+P ++ L L+
Sbjct: 175 EFPT-LIGQLTKLEKLNLANNCLTKIPATIGKLKRLKELNLSGNHLTDLPAQIGRLKKLE 233
Query: 123 SLFLGGNPIKTVRNDILQ 140
+++L N + V + Q
Sbjct: 234 TVYLSQNQFEQVPKHLYQ 251
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL+L N++ S F D+ +L L+L N +T +P V T L L L N
Sbjct: 297 LTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPASVFTGLSALNELKLHTN 356
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
KI ++ F +LT L++L L++N+I+E+S+N L L LDLS ++T + +S
Sbjct: 357 KITDLSASVFASLTALAVLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTS 416
Query: 118 LFHLKSLFLGGNPIKTV 134
L L+ L+L N I ++
Sbjct: 417 LTALRDLYLHFNQITSI 433
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L LDLS ++ S S+ F + +L +L L +NQ+T +P T L L+L +N
Sbjct: 393 LTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHFNQITSIPASAFTGLTALYVLILAYN 452
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+I ++ + F LT L+ L L N I+ +S+N DL +L L L++N++T + +
Sbjct: 453 QITSLPTNTFTGLTALNTLTLSFNPITSISANTFTDLTSLFFLILNNNQITSISANAFAG 512
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L LK L L NP T+ + Q
Sbjct: 513 LPGLKYLVLSDNPFTTLPPGLFQ 535
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L+ LDL NK+ F D+ +LT L L NQ+T +P L L L N
Sbjct: 225 LTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEIPASAFAGLTVLEILNLQGN 284
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCE---- 114
+I N+ F LT L LNL++N+I+ + +S DL L LDL DN +T +P
Sbjct: 285 QITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPASVFTG 344
Query: 115 LSSLFHLK 122
LS+L LK
Sbjct: 345 LSALNELK 352
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNKINNME 65
L LS N++ + F + +LT L+LSYNQ+T +PV LT L L N I ++
Sbjct: 63 LRLSSNQITGIAPSAFTGLTALTVLSLSYNQITSIPVSAFAGLDALTRLDLSSNLITSIS 122
Query: 66 NDYFLTLTKLSLLNLK------------------------NNKISEVSSNV-GDLINLAI 100
F +LT L+ LNL+ NN+I+ +++N L + +
Sbjct: 123 ASAFPSLTALTELNLQGNLITSIPASLFTGLTALRWLPLSNNQITSIAANAFNGLSAVTL 182
Query: 101 LDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTV 134
+ L N++TD+ P + L L L+L GN I ++
Sbjct: 183 IYLQTNQITDLSPATFTGLAALTELYLMGNQITSI 217
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L L LDLS N + S S F + +LTELNL N +T +P T L L L N
Sbjct: 105 LDALTRLDLSSNLITSISASAFPSLTALTELNLQGNLITSIPASLFTGLTALRWLPLSNN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-------------------------SNVGD 94
+I ++ + F L+ ++L+ L+ N+I+++S S
Sbjct: 165 QITSIAANAFNGLSAVTLIYLQTNQITDLSPATFTGLAALTELYLMGNQITSIHASTFAG 224
Query: 95 LINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTV 134
L +L LDL DN++T+VP + L L L L N I +
Sbjct: 225 LTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEI 265
>gi|126570318|gb|ABO21138.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 222
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+ +N LV S F + LT L L YNQL LP V + L L LG N++ +++
Sbjct: 38 LNFQYNSLVQLSSNAFQGLTKLTWLALEYNQLQTLPPGVFDQLRELKDLYLGSNQLKSLQ 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL+LLNL N++ + D++ NL L+L NEL VP L L++
Sbjct: 98 TGVFDSLTKLTLLNLGENQLQSIPKGAFDMLRNLQTLNLFQNELQSVPHGAFDRLGKLQT 157
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLD 183
+ L N R +IL S+ I + + DG G + ES + K+
Sbjct: 158 ITLYSNAWDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTCSDGKVV 209
Query: 184 RTKT 187
RT T
Sbjct: 210 RTVT 213
>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
terrestris]
Length = 610
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TL LS N L S LP ++ ++SL L+L +N+L+ +P V NLT L L FN
Sbjct: 174 LGNLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G L+NL D+S N L +P E+ +
Sbjct: 232 RVRYV-SDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCV 290
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 291 QLSTLDLQHN 300
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HNK+ D +P +F ++L +LN+ NQLT LP+ N+ L LG
Sbjct: 383 FTNVYSINLEHNKI--DKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGT 440
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D L L +L L NN + + +++ +L L +LDL +N++ +P E+ L
Sbjct: 441 NQLTKIPDD-IQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFL 499
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 500 RDLQKLILQSNQVTSLPRAI 519
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKI 61
+L L++ N+L + LPL I ++ ELNL NQLT +P C +NL L+L N +
Sbjct: 409 NLAKLNMKENQLTA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLL 466
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ L KL +L+L+ NKI + + +G L +L L L N++T +P + L +L
Sbjct: 467 KRIPAS-IANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNL 525
Query: 122 KSLFLGGN 129
L +G N
Sbjct: 526 TYLSVGEN 533
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 355 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLN 414
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N+++ + ++G +N+ L+L N+LT +P ++ L +L+ L L N +K + I
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASI 473
>gi|392968303|ref|ZP_10333719.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
gi|387842665|emb|CCH55773.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
Length = 840
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+TLDLS NKL V D L D++SL L+ NQL LP + NL L LG
Sbjct: 624 LVNLQTLDLSFNKLTSVPDELGELSDLQSLV---LNSNQLESLPERLGELSNLRELYLGD 680
Query: 59 NKINNMEND------------YFLTLTKLSL----------LNLKNNKISEVSSNVGDLI 96
NK+ ++ Y LT+L L+L NK+ +S + L
Sbjct: 681 NKLKSLSAGLGQLTNLKRLYIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLT 740
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NL ILDLS N+LT P +LS L +L+ L+LG N +K++ ++ Q
Sbjct: 741 NLRILDLSANQLTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQ 784
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS+L+ L L NKL S S L + +L L + +NQLT LP + NL L LG NK
Sbjct: 670 LSNLRELYLGDNKLKSLSAGLG-QLTNLKRLYIYHNQLTRLPAELSKLINLEELSLGGNK 728
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+ + LT L +L+L N+++ + + L NL L L DN+L +P EL L +
Sbjct: 729 LKNLSVE-LDQLTNLRILDLSANQLTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQLTN 787
Query: 121 LKSLFLGGN 129
L+ L L GN
Sbjct: 788 LQILDLSGN 796
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L ++ L +N+I ++ +G L+NL LDLS N+LT VP EL L L+SL L N ++++
Sbjct: 604 LKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSVPDELGELSDLQSLVLNSNQLESL 663
>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
Fusaro]
gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
Fusaro]
Length = 892
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 28/162 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LKTLDLS N+L+ LP I +++LT LNL NQLT LP + KNLT L L FN
Sbjct: 61 LKNLKTLDLSGNQLIQ--LPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTL-FN 117
Query: 60 -----------KINNMENDYFL------------TLTKLSLLNLKNNKISEVSSNVGDLI 96
K+ N+E Y L LS+L L NK++++ S +G+L
Sbjct: 118 NKLTQIPPEIGKLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLK 177
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL L L N+L ++P E+ L +LK+L++ N + + +I
Sbjct: 178 NLETLSLYRNQLIELPPEIGKLENLKTLYIDNNKLTILPPEI 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 27 RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
++LT LNLS NQLT +P + KNLT L L N + + + L L L+L N++
Sbjct: 16 KNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQE-IGELKNLKTLDLSGNQL 74
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ S +G L NL IL+L DN+LT +P E+ L +L +L L N + + +I
Sbjct: 75 IQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEI 127
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDLS N L LP I ++++L L+LS NQL LP KNLT L L N
Sbjct: 38 LKNLTMLDLSENTLTI--LPQEIGELKNLKTLDLSGNQLIQLPSEIGRLKNLTILNLYDN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L L NNK++++ +G L NL L + N+LT +P E+ L
Sbjct: 96 QLTQLPPE-IKELKNLTALTLFNNKLTQIPPEIGKLKNLETLYIYCNQLTQLPPEIGELK 154
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L N + + ++I
Sbjct: 155 NLSILALNKNKLTQLPSEI 173
>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
Length = 631
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++LKTL S N+L LPL I +++LTEL LS N + LP+ T+ KNLT L + N
Sbjct: 130 LNNLKTLYSSSNQLTQ--LPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++++ + +L NL LDLS N+L +P E++ L
Sbjct: 188 QLIQLPSK-ITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELK 246
Query: 120 HLKSLFLGGNPIKTVRNDIL-QDSKRIISHIKTSR 153
+L +L L NP+ ++ +I+ Q K I +++K S+
Sbjct: 247 NLTTLDLFENPLISLPPEIVSQGVKAIFTYLKQSK 281
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
+L TLDLS N+L LP I ++++LT LNLS NQLT LP + K+LT L N++
Sbjct: 17 NLTTLDLSENQLTQ--LPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQL 74
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L L++LN+ N++ ++ + +L NL LDLS N+LT +P E+ L +L
Sbjct: 75 TQLPPE-IGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNL 133
Query: 122 KSLFLGGN 129
K+L+ N
Sbjct: 134 KTLYSSSN 141
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L LP I +++SLT +LS NQLT LP + KNLT L + N
Sbjct: 38 LKNLTTLNLSGNQLTQ--LPSEIGELKSLTSFDLSVNQLTQLPPEIGELKNLTILNVYRN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L+L NK++++ +G+L NL L S N+LT +P E++ L
Sbjct: 96 QLIQLLPE-ITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEITKLK 154
Query: 120 HLKSLFLGGN 129
+L L+L N
Sbjct: 155 NLTELYLSSN 164
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ L+L N+++++ S + +L NL L+LS N+LT +P E+ L L S L N + +
Sbjct: 18 LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77
Query: 135 RNDI 138
+I
Sbjct: 78 PPEI 81
>gi|444513773|gb|ELV10454.1| Leucine-rich repeat transmembrane neuronal protein 1 [Tupaia
chinensis]
Length = 468
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 106 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 166 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 225
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
++L+ + L GN I+ + + + + S + ++RL Y
Sbjct: 226 WNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 264
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 58 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 117
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 118 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 177
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 178 LFKLTELHLEHNDLVKV 194
>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
Length = 472
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LS+LKTL L+ N L S DSL +++ L L+L +N+L+ +P V LT L L F
Sbjct: 83 LSNLKTLALNENSLTSLPDSLQ---NLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRF 139
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L+ L++L+L+ NKI E+ S +G L+NL LDLS N L +P E+ +
Sbjct: 140 NRIK-VVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNC 198
Query: 119 FHLKSLFLGGN 129
+L +L L N
Sbjct: 199 VNLTALDLQHN 209
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
+H+ ++ N + L + +LT + LS N P + N+ L G N
Sbjct: 245 THMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMVELNFGTNS 304
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +D L L +L L NN + + + +G+L L +LDL +N L +P E+ L
Sbjct: 305 LTKLPDDIH-CLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHD 363
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 364 LQKLILQSNQLTSLPRTI 381
>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
Length = 1015
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+ +LT+L+LS+NQLT LP T NLT L L FN++ ++ D L L+ L+L+ N
Sbjct: 92 DLVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLP-DSLTRLVNLTYLDLRGN 150
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+++ + ++ L+NL LDL N+LT +P L+ L +L L+LG N + ++ N +
Sbjct: 151 QLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSSLLNSL 205
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L LDL N+L S DSL ++ LT L+L NQLT LP T NL +L LG
Sbjct: 139 LVNLTYLDLRGNQLTSLPDSLTRLVN---LTYLDLRGNQLTSLPDSLTRLVNLIYLYLGR 195
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ N L L+ L+L N+++ + ++ L+NL LDLSDN+L+ P L+SL
Sbjct: 196 NQLSSLLNS-LTRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPDSLTSL 254
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
+L L+L GN + ++ + + + +K +S + SR
Sbjct: 255 VNLTELYLTGNQLSSLPDSLTRLAK--LSRLNLSR 287
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+LTEL+LS+NQLT LP T NLT L L N++++ D +L L+ L L N++S
Sbjct: 210 NLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFP-DSLTSLVNLTELYLTGNQLS 268
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRII 146
+ ++ L L+ L+LS N+L+++P L+ L +L L+L GNP++T +I Q I
Sbjct: 269 SLPDSLTRLAKLSRLNLSRNQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEIAQQGIEAI 328
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 38 QLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+LT +P + + L L L +N ++ + ++Y L L L L N ++ +S+++ DL+
Sbjct: 36 KLTEIPEEVFELEWLEVLYLNYNNLSCI-SEYIYCLINLKELYLYCNNLTILSNHITDLV 94
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
NL LDLS N+LT +P L+ L +L L L N + ++
Sbjct: 95 NLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSL 132
>gi|156551095|ref|XP_001603101.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Nasonia
vitripennis]
Length = 591
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 115/223 (51%), Gaps = 8/223 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ LK LD+S+N+L + + ++R + L+ N L+ P C +L L L N I
Sbjct: 209 MRALKKLDVSNNRL--EVVHPLGELRKIERLDFHMNNLSSFPDVNGCTSLHELCLSHNSI 266
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ + +L +L +LNL NN+I + + LIN+ LDLS N ++++P + + +L
Sbjct: 267 TEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDLSYNNISEIPGCVGVMPNL 326
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
++ + GN ++ +R DI+ + RI+ H++ + + N + + ++ DKY
Sbjct: 327 QNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQT---INPTNTETSNSPLRVCSANSYPDKY 383
Query: 181 KLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKL 221
+ K L+L + +P+ ++ ++ ++++ +K ++
Sbjct: 384 TMRNAKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNKLQV 426
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 45/178 (25%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L LD+ N L +SLP I + L +LNLS N+L LP CK
Sbjct: 94 LGDLVNLDIHDNLL--ESLPEEIGSLTKLRKLNLSSNKLRTLP----CK----------- 136
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
F +L +L L+LK+N I E+S +GDL+ L L+LS NELT +P L L
Sbjct: 137 --------FFSLAELRCLDLKSNLIKELSPAIGDLVMLEYLNLSSNELTSLPAGLGYLVR 188
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHI-----------------KTSRLDYHCQNV 161
L +L L N +K + D++ S R + + K RLD+H N+
Sbjct: 189 LIALDLNHNKLKELPPDVM--SMRALKKLDVSNNRLEVVHPLGELRKIERLDFHMNNL 244
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 28/152 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDLS N L S LP + +R L E+N+S+N+ +P C
Sbjct: 458 LERLRYLDLSKNLLTS--LPASLSQLRLLVEINISFNKFEEMPEC--------------- 500
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ L +L +NK+S ++ + +L LA LDLS+N + VP EL +L
Sbjct: 501 --------IYEIAGLEILIANDNKMSCINVPALSNLKRLAHLDLSNNNIGYVPPELGNLK 552
Query: 120 HLKSLFLGGNPIKTVRND-ILQDSKRIISHIK 150
+L+ L L GN K R +++ ++ I+++++
Sbjct: 553 NLRMLSLSGNCFKQPRQATLMKGTEEILAYLR 584
>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 401
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+TL LS N+L + LP I +++L EL L+ NQ T P KNL L L
Sbjct: 113 QLKNLQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L+L N++ +S+ +G L NL +LDL+DN+L +P E+ L
Sbjct: 171 NQLKTLPNEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQL 229
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N KTV +I Q
Sbjct: 230 KNLQMLDLNNNQFKTVPEEIGQ 251
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+L N+L +LP I +++L EL+LSYNQL L +NL L L
Sbjct: 159 QLKNLQQLNLYANQL--KTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 216
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L +L+L NN+ V +G L NL +LDL N+ VP E+ L
Sbjct: 217 NQLKTLPKEIG-QLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQL 275
Query: 119 FHLKSLFLGGNPIKTV 134
+L+ LFL N KTV
Sbjct: 276 KNLQMLFLNNNQFKTV 291
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L+ N+ + P I +++L +LNL NQL LP +NL L L +
Sbjct: 136 QLKNLRELYLNTNQFTA--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSY 193
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L +L+L +N++ + +G L NL +LDL++N+ VP E+ L
Sbjct: 194 NQLKTLSAEIG-QLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQL 252
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N KTV +I Q
Sbjct: 253 KNLQVLDLGYNQFKTVPEEIGQ 274
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL+ N+L +LP I +++L L+L+ NQ +P KNL L LG+
Sbjct: 205 QLQNLQVLDLNDNQL--KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGY 262
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L L +L L NN+ V G L NL +L L+ N+LT +P E+ L
Sbjct: 263 NQFKTVPEEIG-QLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 321
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 322 KNLRELHLSYNQLKTLSAEIGQ 343
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL++N+ ++P I +++L L+L YNQ +P KNL L L
Sbjct: 228 QLKNLQMLDLNNNQF--KTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNN 285
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L L +L+L N+++ + + + L NL L LS N+L + E+ L
Sbjct: 286 NQFKTVPEETG-QLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQL 344
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+LK L L N +KT+ +I
Sbjct: 345 KNLKKLSLRDNQLKTLPKEI 364
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L +L L NN+++ + +G L NL L LS N+LT P E+ L +L++L L N +
Sbjct: 68 LQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRL 127
Query: 132 KTVRNDILQ 140
T+ +I Q
Sbjct: 128 TTLPKEIGQ 136
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+L+L K+ + +G L NL +L+L++N+L +P E+ L +L+ L L GN + T
Sbjct: 50 VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109
Query: 137 DILQ 140
+I Q
Sbjct: 110 EIGQ 113
>gi|47208588|emb|CAF93834.1| unnamed protein product [Tetraodon nigroviridis]
Length = 497
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS+L+ LDLS+N+L + LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 136 LSNLRILDLSYNRLQALEADLFHGLRKLTNLHLRYNALRFVPVRIFQDCRSMLFLDLGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N++ +V+ ++ LI L L + +N T V L
Sbjct: 196 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLIALRTLYMHNNRATIVVNTLEWT 255
Query: 119 F-HLKSLFLGGNPIKTVRNDILQDSKRI-ISHIKTSRLDYHCQNV 161
+ +L+ + + N I+ + + + + + + + ++RL Y Q +
Sbjct: 256 WQYLEKIDVSANEIEHIEPHVFESAPNLKVLMLDSNRLTYVDQQI 300
>gi|301112346|ref|XP_002905252.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095582|gb|EEY53634.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 785
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-------RSLTELNLSYNQLTMLPV-CTDCKNLT 52
ML L+ L LS N L +D++ + SL EL+L N LT +P + + +
Sbjct: 478 MLPRLEHLRLSKNSLTTDAVTAMLASGTRAGISSSLKELDLRNNVLTDIPQNLQNLQAMD 537
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
LLL FN+I + + ++++LS+L++ +N++ E V L L L +NEL +P
Sbjct: 538 TLLLSFNRIKGLNGFPWSSMSQLSVLSIAHNRL-ESCGTVYQAPKLTSLSLENNELRQIP 596
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDIL 139
E + +L++L+LGGNP + +R IL
Sbjct: 597 AEFALCENLRALYLGGNPQRGIRAHIL 623
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGFNK 60
L+ L TLDL N L + F+++ ++ ++L N+L + P + + L L LGFN
Sbjct: 207 LTGLLTLDLKKNCLATTG-DAFLELTAVKYIDLRQNKLEIFPTLPENNSCLDQLFLGFNL 265
Query: 61 INNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L++ + L++L++++NK+ +S + L L LD+++N+L D+P L
Sbjct: 266 LRDVPQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDLFDLPPGFGYLK 325
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+L L + GNP++++R I+
Sbjct: 326 YLTHLLVEGNPLRSIRRSII 345
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKIN 62
LK LDLS+N++ LP ++ ++ L L + +N L LP+ + LT L L N++
Sbjct: 71 LKKLDLSYNEIAE--LPNEVETLKYLVSLKMRHNHLRQLPLTLWSLETLTSLDLSNNELE 128
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L L+ NK++++ ++G L++L +L + N+L +P + L +LK
Sbjct: 129 GCLPEQLGKLDKLRELGLEGNKLTQLPESIGGLVHLEVLRVESNQLKALPSTIGKLRNLK 188
Query: 123 SLFLGGNPIKTV 134
+L N I +
Sbjct: 189 TLTAHSNQIAAL 200
>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 938
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L +LDLS+N + + LP I + +LT LNLS N++T LP NLT L L
Sbjct: 92 QLQNLNSLDLSYNGITT--LPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSV 149
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L L+ LNL N+I+ + + L NL LDLS N +T +P ++ L
Sbjct: 150 NRIRTLP-DAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKL 208
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L SL L N I T+ + I +
Sbjct: 209 HNLTSLSLWNNGITTLPDAIAK 230
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL+LS N++ +LP I + +LT LNL+ N++T LP NLT L L N
Sbjct: 139 LHNLTTLNLSVNRI--RTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + D L L+ L+L NN I+ + + L NL LDLS N +T +P ++ L
Sbjct: 197 RITTLP-DAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLQ 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L +L L GN I T+ + I Q
Sbjct: 256 NLSTLDLRGNEITTLPDAIAQ 276
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L +L+L+ N++ + LP I + +LT L+LS N++T LP NLT L L N
Sbjct: 162 LHNLTSLNLNGNRITT--LPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I + D L L+ L+L N+I+ + + L NL+ LDL NE+T +P ++ L
Sbjct: 220 GITTLP-DAIAKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGNEITTLPDAIAQLH 278
Query: 120 HLKSLFLGGNPIK 132
+L SL L NPI+
Sbjct: 279 NLTSLDLRRNPIE 291
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L +LDLS N++ + LP I + +LT L+L N +T LP NLT L L N
Sbjct: 185 LHNLTSLDLSGNRITT--LPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+I + D L LS L+L+ N+I+ + + L NL LDL N + P E+
Sbjct: 243 RITTLP-DAIAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLDLRRNPIEKPPLEV 297
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+K++E+ + V L L LDLS NE+T +P ++ L +L +L+L N I T+ + I Q
Sbjct: 35 DKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQ 92
>gi|348533526|ref|XP_003454256.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Oreochromis niloticus]
Length = 517
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L + LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N++ +V+ ++ LI+L L + +N T V L
Sbjct: 198 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMHNNRATIVVNTLDWT 257
Query: 119 FH-LKSLFLGGNPIKTVRNDILQDS 142
+H L+ + L N I+ + + + +
Sbjct: 258 WHFLEKIDLSANEIEYIEPHVFEST 282
>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
Length = 1894
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS+NKL S +F + SL L LSYN+LT +P V +L +L L N
Sbjct: 257 LASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSN 316
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
K+ ++ F LT L L L N+++ V V L +L L LS N+LT VP +
Sbjct: 317 KLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTSVPETVFNG 376
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + +V
Sbjct: 377 LASLQTLYLSSNKLTSV 393
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL L N+L S +F + SL L LSYN+LT +P V +L L L +N
Sbjct: 233 LASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYN 292
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ ++ F L L L L +NK++ V + V L +L L LS NELT VP +
Sbjct: 293 ELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTG 352
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + +V
Sbjct: 353 LASLQTLYLSSNKLTSV 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L LS NKL S +F + SL L LSYN+LT +P V +L L L +N
Sbjct: 593 LASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYN 652
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
K+ ++ F L L L L +NK++ V + V L +L L L NELT +P +
Sbjct: 653 KLTSVPATVFAGLASLRSLGLYDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETVFAG 712
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + +V
Sbjct: 713 LTSLQTLYLYDNELTSV 729
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS NKL S +F + SL L LS N+LT +P V +L +L L N
Sbjct: 353 LASLQTLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDN 412
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SS 117
++ ++ F LT L L L +NK++ V V D L +L L LS N+LT VP + +
Sbjct: 413 ELTSIPATVFAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNG 472
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + ++
Sbjct: 473 LASLQTLYLYDNELTSI 489
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS+N+L S +F + SL L LSYN+LT +P V +L L L N
Sbjct: 617 LASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLRSLGLYDN 676
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
K+ ++ F L L L+L N+++ + V L +L L L DNELT VP +
Sbjct: 677 KLTSVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSVPETVFNG 736
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDYHCQNVDGG-------GMSSQ 169
L L+ L+L N + ++ + + + ++ + L + V G +SS
Sbjct: 737 LASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNVSSN 796
Query: 170 ESTS--EINIDKYKLDRTKTLTLCKVINIPESVY 201
E TS E D +T L+ K+ ++PE+V+
Sbjct: 797 ELTSVPETVFDGLASLQTLDLSYNKLTSVPETVF 830
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L + LS NKL S +F + SL L LS N+LT +P V ++ L+L N++
Sbjct: 92 LTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELT 151
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSSLFH 120
++ F L L L L NNK++ V + V L +L L LS N+LT VP + L
Sbjct: 152 SVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLAS 211
Query: 121 LKSLFLGGNPIKTV 134
L+SL+L N + +V
Sbjct: 212 LRSLYLDNNELTSV 225
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L TL + HN+L S F + +L L+L N LT L T + L L N
Sbjct: 953 LARLTTLSIHHNRLTRLSPGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSN 1012
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSL 118
K+ ++ LT L L+L +N+++ +S+ V + L L L LS N L +VP L SL
Sbjct: 1013 KLADLPAQALHNLTGLRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPAGLGSL 1072
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
L+ L L NP+ ++ +L +
Sbjct: 1073 ASLRYLLLDHNPLTSLDVSLLDN 1095
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS N+L S +F + SL L LS N+LT +P V +L +L L N
Sbjct: 545 LASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSN 604
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SS 117
K+ ++ F L L L L N+++ V V L +L L LS N+LT VP + +
Sbjct: 605 KLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAG 664
Query: 118 LFHLKSLFLGGNPIKTV 134
L L+SL L N + +V
Sbjct: 665 LASLRSLGLYDNKLTSV 681
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L+TL LS NKL S +F + SL L L N+LT +P +L L L N
Sbjct: 449 LASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSSN 508
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ ++ F L L L L N+++ V V L +L L LS NELT VP +
Sbjct: 509 ELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAG 568
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + ++
Sbjct: 569 LASLQTLYLSSNELTSI 585
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L LS NKL S +F + S+ L LS N+LT +P V +L +L L N
Sbjct: 113 LASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
K+ ++ F L L L L +NK++ V V L +L L L +NELT VP +
Sbjct: 173 KLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAG 232
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L++L+L N + ++ + ++ ++T L Y + S E
Sbjct: 233 LASLQTLYLYDNELTSIPATVFAG----LASLQTLYLSY----------NKLTSVPETVF 278
Query: 178 DKYKLDRTKTLTLCKVINIPESVY 201
D R+ L+ ++ ++PE+V+
Sbjct: 279 DGLASLRSLYLSYNELTSVPETVF 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS N+L S +F + SL L LS N+LT +P V +L L L N
Sbjct: 497 LASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSGN 556
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ ++ F L L L L +N+++ + V L +L L LS N+LT VP +
Sbjct: 557 ELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKLTSVPETVFAG 616
Query: 118 LFHLKSLFLGGNPIKTV 134
L L++L+L N + +V
Sbjct: 617 LASLQTLYLSYNELTSV 633
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TL LS NKL S +F + SL L L N+LT +P V +L L L N
Sbjct: 185 LASLQTLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDN 244
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ F L L L L NK++ V V D L +L L LS NELT VP
Sbjct: 245 ELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDG 304
Query: 118 LFHLKSLFLGGNPIKTV 134
L L+ L+L N + +V
Sbjct: 305 LASLQYLYLSSNKLTSV 321
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNM 64
++DLS+ + +F + SLTE+ LS N+LT +P V +L +L L NK+ ++
Sbjct: 70 SVDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSI 129
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHLK 122
F L + +L L N+++ V V L +L L L +N+LT VP + + L L+
Sbjct: 130 PETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQ 189
Query: 123 SLFLGGNPIKTV 134
+L+L N + +V
Sbjct: 190 TLYLSSNKLTSV 201
Score = 45.1 bits (105), Expect = 0.028, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+TLDLS+NKL S +F + SL L L N+LT +P V +L L L N
Sbjct: 809 LASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPETVFAGLDSLWRLDLHSN 868
Query: 60 KINNMENDYFLT------------------------LTKLSLLNLKNNKISEVSSNV-GD 94
++ ++ F L L L L +N+++++SS+V
Sbjct: 869 RLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLHSNQLADISSDVFAQ 928
Query: 95 LINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
L +L L L +N L+ + P + L L +L + N + + Q +S + T
Sbjct: 929 LSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQG----LSTLATLD 984
Query: 154 L-DYHCQNVDGGGMSSQESTSEINIDKYKL 182
L D H ++ G ++ ++ +++ KL
Sbjct: 985 LHDNHLTSLTAGALTGLDAMRALDLSSNKL 1014
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 28 SLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+ T ++LSY + + V + +LT + L NK+ ++ F L L L L +NK+
Sbjct: 67 TCTSVDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKL 126
Query: 86 SEVSSNV-GDLINLAILDLSDNELTDVP-CELSSLFHLKSLFLGGNPIKTV 134
+ + V L ++ +L LS NELT VP + L L+ L+L N + +V
Sbjct: 127 TSIPETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYLDNNKLTSV 177
>gi|27753993|ref|NP_083156.2| leucine-rich repeat transmembrane neuronal protein 1 precursor [Mus
musculus]
gi|68052356|sp|Q8K377.1|LRRT1_MOUSE RecName: Full=Leucine-rich repeat transmembrane neuronal protein 1;
Flags: Precursor
gi|20379959|gb|AAH27803.1| Lrrtm1 protein [Mus musculus]
gi|26343395|dbj|BAC35354.1| unnamed protein product [Mus musculus]
gi|26343413|dbj|BAC35363.1| unnamed protein product [Mus musculus]
gi|29540616|gb|AAO67546.1| leucine-rich repeat transmembrane neuronal 1 protein [Mus musculus]
gi|74205266|dbj|BAE23148.1| unnamed protein product [Mus musculus]
gi|148666596|gb|EDK99012.1| leucine rich repeat transmembrane neuronal 1, isoform CRA_a [Mus
musculus]
gi|148666597|gb|EDK99013.1| leucine rich repeat transmembrane neuronal 1, isoform CRA_a [Mus
musculus]
Length = 522
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
++L+ + L GN I+ + + + + +++T +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFE----TVPYLQTLQLD 288
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|418707301|ref|ZP_13268127.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772348|gb|EKR47536.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 214
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+LS KL ++P I +++L ELNL NQLT LP KNL L LG+N++
Sbjct: 46 VRVLELSEQKL--KTIPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLT 103
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L L NN+++ + + L NL L L +N+LT +P E+ L +LK
Sbjct: 104 TLSQEIG-QLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQLTTLPIEIGQLQNLK 162
Query: 123 SLFLGGNPIKTVRNDILQ 140
SL LG N + + +I Q
Sbjct: 163 SLDLGNNQLTILPKEIGQ 180
>gi|322802762|gb|EFZ22974.1| hypothetical protein SINV_03581 [Solenopsis invicta]
Length = 402
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L L HN L +D L F ++ +L ELNLS N T P D L +L LG N IN
Sbjct: 142 LTCLIAKHNNLTNDGLAKDFENLANLRELNLSGNSFTEFPEQILDLPGLRYLYLGGNHIN 201
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D + L L +L++ +N+++EV S +G+L L L L DN L +P +++L +LK
Sbjct: 202 EITKDIW-KLQSLRVLSMGDNRLTEVPSTLGELKALQALVLCDNMLESLPSSIANLTNLK 260
Query: 123 SLFLGGNPIKTVRNDIL 139
+L L N ++T+ +I+
Sbjct: 261 TLSLHKNRLRTLPTEII 277
>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
Length = 401
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+TL LS N+L + LP I +++L EL L+ NQ T P KNL L L
Sbjct: 113 QLKNLQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L+L N++ +S+ +G L NL +LDL+DN+L +P E+ L
Sbjct: 171 NQLKTLPNEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQL 229
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N KTV +I Q
Sbjct: 230 KNLQMLDLNNNQFKTVPEEIGQ 251
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+L N+L +LP I +++L EL+LSYNQL L +NL L L
Sbjct: 159 QLKNLQQLNLYANQL--KTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 216
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L +L+L NN+ V +G L NL +LDL N+ VP E+ L
Sbjct: 217 NQLKTLPKEIG-QLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQL 275
Query: 119 FHLKSLFLGGNPIKTV 134
+L+ LFL N KTV
Sbjct: 276 KNLQMLFLNNNQFKTV 291
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L+ N+ + P I +++L +LNL NQL LP +NL L L +
Sbjct: 136 QLKNLRELYLNTNQFTA--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSY 193
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L +L+L +N++ + +G L NL +LDL++N+ VP E+ L
Sbjct: 194 NQLKTLSAEIG-QLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQL 252
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N KTV +I Q
Sbjct: 253 KNLQVLDLGYNQFKTVPEEIGQ 274
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL+ N+L +LP I +++L L+L+ NQ +P KNL L LG+
Sbjct: 205 QLQNLQVLDLNDNQL--KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGY 262
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L L +L L NN+ V G L NL +L L+ N+LT +P E+ L
Sbjct: 263 NQFKTVPEEIG-QLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 321
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 322 KNLRELHLSYNQLKTLSAEIGQ 343
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL++N+ ++P I +++L L+L YNQ +P KNL L L
Sbjct: 228 QLKNLQMLDLNNNQF--KTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNN 285
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L L +L+L N+++ + + + L NL L LS N+L + E+ L
Sbjct: 286 NQFKTVPEETG-QLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQL 344
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+LK L L N +KT+ +I
Sbjct: 345 KNLKKLSLRDNQLKTLPKEI 364
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L +L L NN+++ + +G L NL L LS N+LT P E+ L +L++L L N +
Sbjct: 68 LQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRL 127
Query: 132 KTVRNDILQ 140
T+ +I Q
Sbjct: 128 TTLPKEIGQ 136
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +L+L K+ + +G L NL +L+L++N+L +P E+ L +L+ L L GN + T
Sbjct: 48 VRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTF 107
Query: 135 RNDILQ 140
+I Q
Sbjct: 108 PKEIGQ 113
>gi|255089471|ref|XP_002506657.1| predicted protein [Micromonas sp. RCC299]
gi|226521930|gb|ACO67915.1| predicted protein [Micromonas sp. RCC299]
Length = 205
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+L HN+L S +P I + SLT L L+ NQLT +P +L L L N
Sbjct: 27 LTALRDLNLQHNELTS--VPAEIGQLTSLTSLWLNNNQLTSVPAEIGQLTSLEGLYLWDN 84
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + LT L+ L+L N+++ V + +G L +L L+L DN+LT +P E+ L
Sbjct: 85 KLTSVPTEIG-QLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYDNQLTSLPAEIGQLT 143
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L +LFL N + V +I Q
Sbjct: 144 SLTALFLDDNRLTRVPAEIGQ 164
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L NKL S +P I + SLT+L+L NQLT +P +L L L N
Sbjct: 73 LTSLEGLYLWDNKLTS--VPTEIGQLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYDN 130
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT L+ L L +N+++ V + +G L +L LDL N+LT VP E++ L
Sbjct: 131 QLTSLPAEIG-QLTSLTALFLDDNRLTRVPAEIGQLASLVGLDLQHNKLTSVPAEIAQL 188
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
V + VG L L L+L NELT VP E+ L L SL+L N + +V +I Q
Sbjct: 20 VPAEVGRLTALRDLNLQHNELTSVPAEIGQLTSLTSLWLNNNQLTSVPAEIGQ 72
>gi|167524890|ref|XP_001746780.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774560|gb|EDQ88187.1| predicted protein [Monosiga brevicollis MX1]
Length = 411
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L LDLS+N L + S F + LTELNLS N L+ LP NL L L N++ +
Sbjct: 62 LHFLDLSNNTLTTLSESFFT-LVHLTELNLSNNHLSALPKHIGQLTNLVKLDLSSNRLTH 120
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + LT L LN+ NN+++ + + V L L L + N +T +P +++ L +L+
Sbjct: 121 LPEE-LTQLTDLETLNVSNNRLATIPAPVLALEQLQKLYIGSNAITALPADIARLKNLEV 179
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+LGGN ++TV +++ Q S+ + ++ +RL
Sbjct: 180 LYLGGNLLRTVNDNLCQLSRLTLLYLGGNRL 210
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+TL++S+N+L + P+ + + L +L + N +T LP KNL L LG N
Sbjct: 128 LTDLETLNVSNNRLATIPAPV-LALEQLQKLYIGSNAITALPADIARLKNLEVLYLGGNL 186
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + ND L++L+LL L N++ ++S + +L L L+L DN+L +P + +
Sbjct: 187 LRTV-NDNLCQLSRLTLLYLGGNRLRKLSPKIANLHRLRTLNLHDNQLQFLPPAIVDMRS 245
Query: 121 LKSLFLGGNPIKT-----VRNDILQDSKRIISHIKTSRLDY--HC 158
L+ L L NP+ T VR + L + IK + + Y HC
Sbjct: 246 LRQLSLRNNPLVTDFVEDVRPEPLSLLELCAREIKRNGIKYCRHC 290
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHLL-LGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+TE L+ ++ +P H L L N + + +F TL L+ LNL NN +S
Sbjct: 39 ITEFKLAGMNISEVPTRVTKATFLHFLDLSNNTLTTLSESFF-TLVHLTELNLSNNHLSA 97
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+ ++G L NL LDLS N LT +P EL+ L L++L + N + T+ +L
Sbjct: 98 LPKHIGQLTNLVKLDLSSNRLTHLPEELTQLTDLETLNVSNNRLATIPAPVL 149
>gi|222623959|gb|EEE58091.1| hypothetical protein OsJ_08960 [Oryza sativa Japonica Group]
Length = 939
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
S L L+L NKLV+ S +F+ LTE+N + N LT +P
Sbjct: 160 SKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
DC +L +G N + ++ D + L+ L +L+L +N++ E L L
Sbjct: 220 TLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGM-LSNLGILDLHSNQLKEYPVGACRL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL ++ L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSD- 336
Query: 159 QNVDGGGMSSQE-----STSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+ G G + + + +++ +LD L+ V ++P + +
Sbjct: 337 EGASGSGSTPTKDDQIAAARRLSLSSKELD----LSGLGVTSVPPAAW 380
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+ELN S N +++LP C L L L NK+ + + F++ T L+ +N N ++
Sbjct: 139 LSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTA 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ +G L L LDL N++T +P + L ++G N + ++ DI
Sbjct: 199 IPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDI 249
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FHLKSLFLGGNPIKTV 134
+L N ++ V + DL +L LDLSDN +T +P EL L +L+ L L GNP++ V
Sbjct: 507 DLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRRV 563
>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
Fusaro]
gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
Length = 863
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 93/161 (57%), Gaps = 13/161 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L +S N+L S P ++++SLT++N+ NQLT LP ++ K+LT L + N+
Sbjct: 153 LKNLKQLSISRNQLTSLP-PEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQ 211
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF- 119
+ ++ ++ L L+ L++ N+++ + + +L NL LD+S N+LT +P E+ L
Sbjct: 212 LTSLPSE-IANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEILKLGI 270
Query: 120 --------HLKSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
K +FL GNP++ +I+ Q + +I++ K+
Sbjct: 271 DIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFKS 311
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Query: 7 TLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
L LS+ L S LP I ++++ T+L +SYNQLT LP ++ KNL L + +N++ ++
Sbjct: 20 ALRLSYKNLTS--LPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSL 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
D L L+ LN++NN+++ + + L NL LD+S+N+LT +P ++ L L L
Sbjct: 78 PPD-ISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQL 136
Query: 125 FLGGNPIKTVRNDI 138
+ N + ++ +I
Sbjct: 137 SISKNQLTSLPPEI 150
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L + L +S+N+L S LP I ++++L +L++SYNQLT LP + KNLT L + N
Sbjct: 38 LKNFTKLYISYNQLTS--LPPEISELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ L L L++ N+++ + S + +L +L L +S N+LT +P E+S L
Sbjct: 96 QLTSLPPG-ISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLK 154
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK L + N + ++ +IL+
Sbjct: 155 NLKQLSISRNQLTSLPPEILE 175
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LD+S N+L S LP I +++ LT+L++S NQLT LP + KNL L + N
Sbjct: 107 LKNLKQLDISENQLTS--LPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRN 164
Query: 60 K----------------INNMENDY------FLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ IN EN L L+ L++ N+++ + S + +L +
Sbjct: 165 QLTSLPPEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLES 224
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LD+S N+LT +P E++ L +L L + N + ++ +IL+
Sbjct: 225 LTQLDISRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEILK 267
>gi|297741963|emb|CBI33408.3| unnamed protein product [Vitis vinifera]
Length = 721
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK-INNMENDYFLTLTKLSLLN 79
P F+ ++ ++L NQ+ L C NL+ L L N + + N +F + L +L+
Sbjct: 333 PDFVKWKATERISLMDNQIEKLTGSPTCPNLSTLRLDLNSDLQMISNGFFQFMPNLRVLS 392
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L N KI E+ S++ +L++L LDLS E+ +P E+ +L LK L L + + ++ ++
Sbjct: 393 LSNTKIVELPSDISNLVSLQYLDLSGTEIKKLPIEMKNLVQLKILILCTSKVSSIPRGLI 452
Query: 140 QDSKRIISHIKTSRLDYHCQNVDGGGMS-SQESTSEINIDKYKLDRTKTLTLCKVINIPE 198
S ++ + + Q +GG S +ES E +L+ K LT V
Sbjct: 453 -SSLLMLQAVGMYNCGLYDQVAEGGVESYGKESLVE------ELESLKYLTHLTVTIASA 505
Query: 199 SVYMRGMSSQE---CTIEINIDKYK 220
SV R +SS++ CT+ I ++ +K
Sbjct: 506 SVLKRFLSSRKLPSCTVGICLEMFK 530
>gi|354485829|ref|XP_003505084.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Cricetulus griseus]
Length = 522
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
++L+ + L GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 294
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|320165522|gb|EFW42421.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 743
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L LDL+ N++ + S F + +L LNL+ NQ+T + T L +L L N
Sbjct: 249 LTALTHLDLTDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTN 308
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+I+++ F LT L+ ++L NN I+ +S+N L L ILDLSDN++T +P + +S
Sbjct: 309 QISSISTSAFAGLTVLTEMSLNNNSITSISANTFAVLTALTILDLSDNQITSIPADAFAS 368
Query: 118 LFHLKSLFLGGNPIKTV 134
L L +L L N I ++
Sbjct: 369 LTALDTLSLNDNQITSI 385
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 31/151 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN----------- 50
L+ L+ L L++N++ S FI + L EL L+YNQ+T +P
Sbjct: 105 LTFLRELFLNYNQITSFPADTFIGLTFLRELFLNYNQITSIPTSAFASQTALIQLDLRSN 164
Query: 51 ---------------LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GD 94
L +L + FN+ ++ + F LT L+ L+L N+I+ + +N
Sbjct: 165 LITSFPADTFIGLTMLKNLYMDFNQFTSIPANTFTGLTALTFLSLHTNQIASIPANTFTG 224
Query: 95 LINLAILDLSDNELT----DVPCELSSLFHL 121
L L LDL++N++T D L++L HL
Sbjct: 225 LTALTFLDLTNNQITNTSVDAFTGLTALTHL 255
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L N++ S F + +LT L+L+ NQ+T V T LTHL L N
Sbjct: 201 LTALTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQITNTSVDAFTGLTALTHLDLTDN 260
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
+I + F LT L LLNL N+I+ +S+N L L L L+ N+++ +
Sbjct: 261 RITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQISSI 313
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC--KNLTHLLLGFN 59
L+ L L L+ N++ S S F + LTE++L+ N +T + T LT L L N
Sbjct: 297 LTTLNYLFLTTNQISSISTSAFAGLTVLTEMSLNNNSITSISANTFAVLTALTILDLSDN 356
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL 115
+I ++ D F +LT L L+L +N+I+ + +N L L L L +N LT +P L
Sbjct: 357 QITSIPADAFASLTALDTLSLNDNQITSIPANAFTSLTTLHRLPLENNPLTTLPPGL 413
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L L+L N++ S FI + L EL L+YNQ+T P T L L L +N
Sbjct: 81 LTALTRLELKTNQITSFPADTFIGLTFLRELFLNYNQITSFPADTFIGLTFLRELFLNYN 140
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILD---LSDNELTDVPC-EL 115
+I ++ F + T L L+L++N I+ ++ I L +L + N+ T +P
Sbjct: 141 QITSIPTSAFASQTALIQLDLRSNLITSFPADT--FIGLTMLKNLYMDFNQFTSIPANTF 198
Query: 116 SSLFHLKSLFLGGNPIKTV 134
+ L L L L N I ++
Sbjct: 199 TGLTALTFLSLHTNQIASI 217
>gi|284010701|dbj|BAI66830.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 273
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L L+ N+L + + +F + +LT+L L NQL LP + +T+L L N
Sbjct: 63 LTKLRLLYLNDNQLQALPIGVFDQLVNLTDLRLRQNQLESLPQGIFDKLTKITYLDLDNN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
K+ + N F LT+L++L L NNK+ + V D L L L++S+N+L VP E S
Sbjct: 123 KLQRLPNGVFDKLTQLTILYLHNNKLQSIPDGVFDKLTELRTLEMSNNQLKSVPEEAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L LK L L NP NDIL SK I
Sbjct: 183 LEKLKMLQLQENPWDCSCNDILYLSKWI 210
>gi|218191855|gb|EEC74282.1| hypothetical protein OsI_09529 [Oryza sativa Indica Group]
Length = 1017
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
S L L+L NKLV+ S +F+ LTE+N + N LT +P
Sbjct: 160 SKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
DC +L +G N + ++ D + L+ L +L+L +N++ E L L
Sbjct: 220 TLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGM-LSNLGILDLHSNQLKEYPVGACRL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL ++ L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSD- 336
Query: 159 QNVDGGGMSSQE-----STSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+ G G + + + +++ +LD L+ V ++P + +
Sbjct: 337 EGASGSGSTPTKDDQIAAARRLSLSSKELD----LSGLGVTSVPPAAW 380
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+ELN S N +++LP C L L L NK+ + + F++ T L+ +N N ++
Sbjct: 139 LSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTA 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ +G L L LDL N++T +P + L ++G N + ++ DI
Sbjct: 199 IPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDI 249
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FHLKSLFLGGNPIKTV 134
+L N ++ V + DL +L LDLSDN +T +P EL L +L+ L L GNP++ V
Sbjct: 507 DLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRRV 563
>gi|344251043|gb|EGW07147.1| Leucine-rich repeat transmembrane neuronal protein 1 [Cricetulus
griseus]
Length = 492
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 106 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 166 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 225
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
++L+ + L GN I+ + + + + S + ++RL Y
Sbjct: 226 WNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 264
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 58 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 117
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 118 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 177
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 178 LFKLTELHLEHN 189
>gi|255086811|ref|XP_002509372.1| predicted protein [Micromonas sp. RCC299]
gi|226524650|gb|ACO70630.1| predicted protein [Micromonas sp. RCC299]
Length = 140
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+LS L+ L L++N+L S +P I + SLT L+LS+NQLT +P +L L L +
Sbjct: 7 VLSALRELSLNYNELTS--VPAEIGQLTSLTGLSLSHNQLTSVPAEIGQLTSLRWLNLSY 64
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT L L+L++N+++ V + +G L +L L L++N+LT VP E+ L
Sbjct: 65 NELTSVPAEIG-QLTSLQWLSLEDNQLTSVPAEIGQLTSLRELILNNNQLTSVPAEIGQL 123
Query: 119 FHLKSLFLGGN 129
L+ L LG N
Sbjct: 124 TSLEWLNLGDN 134
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L EL+L+YN+LT +P +LT L L N++ ++ + LT L LNL N+
Sbjct: 8 LSALRELSLNYNELTSVPAEIGQLTSLTGLSLSHNQLTSVPAEIG-QLTSLRWLNLSYNE 66
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ V + +G L +L L L DN+LT VP E+ L L+ L L N + +V +I Q
Sbjct: 67 LTSVPAEIGQLTSLQWLSLEDNQLTSVPAEIGQLTSLRELILNNNQLTSVPAEIGQ 122
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L LSHN+L S +P I + SL LNLSYN+LT +P +L L L N
Sbjct: 31 LTSLTGLSLSHNQLTS--VPAEIGQLTSLRWLNLSYNELTSVPAEIGQLTSLQWLSLEDN 88
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ ++ + LT L L L NN+++ V + +G L +L L+L DN LT P
Sbjct: 89 QLTSVPAEIG-QLTSLRELILNNNQLTSVPAEIGQLTSLEWLNLGDNRLTSEP 140
>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 353
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+LS N+LVS +P I +++L L L NQ+T+LP +NL L L
Sbjct: 200 QLKNLQKLNLSENQLVS--IPKEILQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ ++ + L L L+L NN+++ + +G L NL L+L +N+LT++P E+ L
Sbjct: 258 NQFTSLPKEID-KLKNLRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
+L+ L L NP+ + ++ ++++ + +D+ +GGG
Sbjct: 317 KNLQRLELDSNPLSS------KEKEKVVKLLPNCEIDF-----EGGG 352
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK LDL N+L + + + +++L +LNLS N+L +P KNL L L N
Sbjct: 108 QLKSLKNLDLFRNQLTTVPKEVML-LQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHN 166
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++ + L +L L L+NN+ V L NL L+LS+N+L +P E+ L
Sbjct: 167 QIVSLPKEIE-ELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQ 225
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N I + ++LQ
Sbjct: 226 NLRNLVLDRNQITILPTEVLQ 246
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ L+LS N+L +++P I +++L L L +NQ+ LP + + L L+L
Sbjct: 131 LLQTLEKLNLSLNRL--NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKELILEN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ N+ + L L L LNL N++ + + L NL L L N++T +P E+ L
Sbjct: 189 NRFKNVPGEA-LQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTEVLQL 247
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N ++ +I
Sbjct: 248 QNLQELYLSENQFTSLPKEI 267
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS+ LT P KNL L L N++ + + + L L L+L +NK++ +
Sbjct: 46 LDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPK 104
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
+ L +L LDL N+LT VP E+ L L+ L L N + V +I Q + +++
Sbjct: 105 EIEQLKSLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQ-----LKNLQ 159
Query: 151 TSRLDYH 157
+LD++
Sbjct: 160 ILKLDHN 166
>gi|326919737|ref|XP_003206134.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4-like [Meleagris gallopavo]
Length = 927
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L++L L+ K+ S + L + + L L+LSYN + LP T C +L + L N+I+ +
Sbjct: 297 LESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCHSLEEISLQHNQIHEI 356
Query: 65 ENDYFLTLTKLSLLNLKNNKI----SEVSSNVGDLINLAILDLSDNELTDVPCE-LSSLF 119
+D F L+ L +L+L N+I E + +G ++N LDLS NELT VP E LS L
Sbjct: 357 TDDTFQGLSSLRVLDLSRNRIRKIHKEAFTTIGAIVN---LDLSFNELTSVPTEGLSGLN 413
Query: 120 HLKSLFLGGNP 130
LK L GNP
Sbjct: 414 QLK---LAGNP 421
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS L++L L N + + F + L L L N LT +P+ ++ +L L L N
Sbjct: 104 LSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALN 163
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSL 118
KI ++ + F L+ L +L+L NNKI + + D L NL LDL+ N + + P + +L
Sbjct: 164 KITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPEAIKAL 223
Query: 119 FHLKSLFLGGNPIKTV 134
+LK L N I +
Sbjct: 224 PNLKELAFHSNYISII 239
>gi|157820119|ref|NP_001102844.1| leucine-rich repeat transmembrane neuronal protein 1 precursor
[Rattus norvegicus]
gi|425936276|sp|D4A6D8.1|LRRT1_RAT RecName: Full=Leucine-rich repeat transmembrane neuronal protein 1;
Flags: Precursor
gi|149036453|gb|EDL91071.1| rCG56532, isoform CRA_a [Rattus norvegicus]
gi|149036454|gb|EDL91072.1| rCG56532, isoform CRA_a [Rattus norvegicus]
Length = 523
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVAIVVSSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
++L+ + L GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 294
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ+T L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
K+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 KLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGN 129
LF L L L N
Sbjct: 208 LFKLTELHLEHN 219
>gi|195377401|ref|XP_002047478.1| GJ13470 [Drosophila virilis]
gi|194154636|gb|EDW69820.1| GJ13470 [Drosophila virilis]
Length = 539
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFNK 60
S L+ LDLS+N +V+ F L EL+L++N++ + T +T L L N
Sbjct: 96 SQLQFLDLSYNDMVTIPERSFAYHAKLLELHLNHNKIGQVTNKTFTGLTTITVLNLRGNL 155
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELS--S 117
I +E F + KL LNL N+IS + + D LINL+IL L DN LT VP EL+ +
Sbjct: 156 IAELEYRTFSPMVKLVELNLGQNRISHIDPHALDGLINLSILYLDDNTLTTVPSELTFQA 215
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC---QNVDGGGMSSQESTSE 174
L L L+LG N T+ QD K + +RLD N+ + E
Sbjct: 216 LPGLAELYLGTNSFMTIPAGAFQDLKAL------TRLDLRGAGLHNISADALKGLEGIRF 269
Query: 175 INIDKYKLDRTKTLTLCKVINIPE 198
+++ +L + L ++ + E
Sbjct: 270 LDLSDNRLQVVPSAALQRLARLEE 293
>gi|418735798|ref|ZP_13292203.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748526|gb|EKR01425.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 264
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I ++++L ELNL+ NQL LP +NL L L N
Sbjct: 64 LQNLRILNLYRNQLTT--LPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAEN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L++L+L+NN++ + ++G L NL +LDL N+LT +P E+ L
Sbjct: 122 QLKTLPNEIG-ELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLK 180
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L L N + T+ +I + K I ++ + L
Sbjct: 181 NLTKLDLNYNELTTLPKEIGELQKLTILDLRNNEL 215
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ N+L +LP I +++L EL L+ NQL LP + +NLT L L N
Sbjct: 87 LQNLRELNLTKNQL--KTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNN 144
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L++L+L N+++ + +G L NL LDL+ NELT +P E+ L
Sbjct: 145 ELKTIPKDIG-KLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQ 203
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L N +KT+ N+I
Sbjct: 204 KLTILDLRNNELKTLPNEI 222
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L +LP I ++++LT L+L N+L +P KNLT L L N
Sbjct: 110 LQNLRELRLAENQL--KTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHIN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L+L N+++ + +G+L L ILDL +NEL +P E+ L
Sbjct: 168 QLTTLPKEIG-KLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLPNEIGKLK 226
Query: 120 HLKSLFLGGNP 130
L+ L+L P
Sbjct: 227 ELRKLYLDDIP 237
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + +L+L N +++ + +G+L NL IL+L N+LT +P E+ L +L+ L L N +K
Sbjct: 42 TDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLK 101
Query: 133 TVRNDI 138
T+ +I
Sbjct: 102 TLPKEI 107
>gi|195165589|ref|XP_002023621.1| GL19818 [Drosophila persimilis]
gi|194105755|gb|EDW27798.1| GL19818 [Drosophila persimilis]
Length = 1242
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L++LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LTNLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSLDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D +T L LNL +N+I+E+SS++ L L+L N+LT +P L L
Sbjct: 229 NSLPKLP-DCVYNVTTLVRLNLSDNEINELSSSMESWQRLESLNLCRNQLTALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ LF+ N +
Sbjct: 288 PKLRRLFVNDNKL 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN+L + +P LF + LT L+LS+N+L +P D KNL L L
Sbjct: 74 LTCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPDGLDRAKNLIVLNLSH 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + F+ LT L L+L +N++ + L NL LDLS N P EL L
Sbjct: 133 NQIECIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLTNLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTE---LNLSYNQLTMLPV-CTDCKNLTHLLL 56
+L ++ +D + N S + P MR ++ L L + QL +P + L HL L
Sbjct: 3 VLPFIRGVDFTKNDF-SQTFP--SSMRQMSRVQWLTLDHTQLQEVPEELGQLQKLEHLSL 59
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
N++ + + LT L L+L++N++ S + + L L LDLS N+L +VP
Sbjct: 60 NHNQLEKIFGE-LTELTCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPDG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+ +
Sbjct: 119 LDRAKNLIVLNLSHNQIECI 138
>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 310
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LSHNKL S LP I ++ L L+L NQL LP + L LLL N
Sbjct: 110 LQNLRVLGLSHNKLTS--LPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L KL L+L +N++ + ++G L NL +L L N+L +P ++ L
Sbjct: 168 QLTMLPKDIG-QLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQ 226
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L LGGN + T+ DI
Sbjct: 227 NLQVLDLGGNQLATLPKDI 245
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 8 LDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNME 65
LDL++N+L + LP I +++L +L L NQLT LP K L L L N++ +
Sbjct: 47 LDLTNNQLTT--LPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLP 104
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ L L +L L +NK++ + ++G L L L L DN+L +P ++ L L+ L
Sbjct: 105 KEIG-QLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELL 163
Query: 126 LGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L N + + DI Q K H+ ++L
Sbjct: 164 LYNNQLTMLPKDIGQLQKLQRLHLGDNQL 192
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + +L+L NN+++ + ++G L NL L L N+LT +P ++ L L+ L L N +K
Sbjct: 42 TDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLK 101
Query: 133 TVRNDILQ 140
T+ +I Q
Sbjct: 102 TLPKEIGQ 109
>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
2000030832]
Length = 504
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L+H++L + LP I ++++L ELNL+ NQ T LP + + L L L ++
Sbjct: 265 LQKLQKLSLAHSRLTT--LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYS 322
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L N++ + +G L NL L LS NELT +P E+ +L
Sbjct: 323 QLTTLPKEIG-KLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQ 381
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L LGGN + T+ I
Sbjct: 382 NLKELDLGGNQLTTLPEKI 400
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+TLDLSHN+L +LP I +++ L L+L+ NQL LP + + L L LG N
Sbjct: 150 LQKLQTLDLSHNRLT--TLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN 207
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L NN+++ + +G+L NL L+L+ N+ T +P E+ +L
Sbjct: 208 ELTTLPKE-IEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 266
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L + + T+ +I
Sbjct: 267 KLQKLSLAHSRLTTLPKEI 285
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK L LSHN+L + LP I ++++L EL+L NQLT LP + + L L L N
Sbjct: 357 LQNLKNLSLSHNELTT--LPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGN 414
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +L N +++ + +G+L +L L+LS N LT P E+ L
Sbjct: 415 RLKTLPKEIGNLQNLQTLNLNNN-QLTTLPKEIGNLQSLESLNLSGNSLTSFPEEIGKLQ 473
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+LGGNP + + +Q
Sbjct: 474 KLKWLYLGGNPFLRSQEEKIQ 494
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+TLDL+ N+L +LP I+ ++ L L+L N+LT LP + + L L LG N
Sbjct: 173 LQKLQTLDLAQNQL--KTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNN 230
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+ + + +G+L L L L+ + LT +P E+ +L
Sbjct: 231 ELTTLPKEIG-NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQ 289
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N T+ +I
Sbjct: 290 NLQELNLNSNQFTTLPEEI 308
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 13 NKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFL 70
NKL + LP I ++++L ELNL+ NQ T LP + + L L L N++ + +
Sbjct: 115 NKLTT--LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIG- 171
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L KL L+L N++ + + L L L L +NELT +P E+ L L++L LG N
Sbjct: 172 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNE 231
Query: 131 IKTVRNDI 138
+ T+ +I
Sbjct: 232 LTTLPKEI 239
>gi|225462595|ref|XP_002270572.1| PREDICTED: probable disease resistance protein At5g63020-like
[Vitis vinifera]
Length = 897
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK-INNMENDYFLTLTKLSLLN 79
P F+ ++ ++L NQ+ L C NL+ L L N + + N +F + L +L+
Sbjct: 509 PDFVKWKATERISLMDNQIEKLTGSPTCPNLSTLRLDLNSDLQMISNGFFQFMPNLRVLS 568
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L N KI E+ S++ +L++L LDLS E+ +P E+ +L LK L L + + ++ ++
Sbjct: 569 LSNTKIVELPSDISNLVSLQYLDLSGTEIKKLPIEMKNLVQLKILILCTSKVSSIPRGLI 628
Query: 140 QDSKRIISHIKTSRLDYHCQNVDGGGMS-SQESTSEINIDKYKLDRTKTLTLCKVINIPE 198
S ++ + + Q +GG S +ES E +L+ K LT V
Sbjct: 629 -SSLLMLQAVGMYNCGLYDQVAEGGVESYGKESLVE------ELESLKYLTHLTVTIASA 681
Query: 199 SVYMRGMSSQE---CTIEINIDKYK 220
SV R +SS++ CT+ I ++ +K
Sbjct: 682 SVLKRFLSSRKLPSCTVGICLEMFK 706
>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
Length = 993
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L +L+L N++ LP I ++ SLT L+LS+NQ+ LP + + +LT+L L FN
Sbjct: 439 LTSLTSLNLWSNQIAE--LPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFN 496
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + LT LS L+L NN+I+E+ +G+L +L L L +N++ +P SL
Sbjct: 497 QIAELLQT-IGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLN 555
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKR 144
+L+ L L GNP+ + +IL +K+
Sbjct: 556 NLEKLDLRGNPVP-IPPEILGTNKK 579
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 15 LVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLT 73
L+++ P+ + + LT L++ N++ LP NLT L L NKI ++ N +F +T
Sbjct: 60 LLTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPN-WFSEMT 118
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
+L+ L L N+ ++E+ V L NL L S+N L +P +S+L +LK L LGGN +
Sbjct: 119 RLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQ 178
Query: 134 VRNDI 138
+ I
Sbjct: 179 LPESI 183
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L L L NK+ LP I ++ SLT L LS NQ+ LP + +LT L L FN
Sbjct: 324 LTSLTNLFLGRNKIAE--LPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFN 381
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + LT L+ LNL NN+I+E+ +G+L +L L LS+N++ ++P + +L
Sbjct: 382 QIAELPQT-IGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLT 440
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L SL L N I + I
Sbjct: 441 SLTSLNLWSNQIAELPQTI 459
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L +L L N++ +P I ++ SLT L LS NQ+ ++P + +LT L L FN
Sbjct: 232 LTSLTSLKLWSNQIAI--IPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFN 289
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + LT L+ L+L+NN+I+E+ +G+L +L L L N++ ++P + +L
Sbjct: 290 QIAELPQT-IGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLT 348
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L SL+L N I + I
Sbjct: 349 SLTSLYLSNNQIAELPQTI 367
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L +L+L N++ LP I + SLT L L NQ+ ++P + +LT L L N
Sbjct: 209 LTSLTSLNLGENQIAE--LPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSN 266
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L+L N+I+E+ +G+L +L L L +N++ ++P + +L
Sbjct: 267 QIAIIP-EAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLT 325
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L +LFLG N I + I
Sbjct: 326 SLTNLFLGRNKIAELPQTI 344
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L +L LS+N++ LP I ++ SLT L+LS+NQ+ LP + +LT L L N
Sbjct: 347 LTSLTSLYLSNNQIAE--LPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNN 404
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + LT L+ L L NN+I+E+ +G+L +L L+L N++ ++P + +L
Sbjct: 405 QIAELPQT-IGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLT 463
Query: 120 HLKSLFLGGNPI 131
L SL L N I
Sbjct: 464 SLTSLDLSFNQI 475
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L++L L S N L LP I ++++L +L+L N L+ LP L L + N
Sbjct: 140 LTNLTYLGFSENNL--QVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWEN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + LT L+ LNL N+I+E+ +G L +L L L N++ +P + +L
Sbjct: 198 KLTEIP-QAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLT 256
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L +L L N I + I
Sbjct: 257 SLTALGLSSNQIAIIPEAI 275
>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
rotundata]
Length = 610
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L+TL LS N L S LP ++ ++SL L+L +N+L+ +P V +LT L L FN
Sbjct: 174 LANLETLALSENSLTS--LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G L+NL D+S N L +P E+ +
Sbjct: 232 RVRYV-SDNIRNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCV 290
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 291 QLSTLDLQHN 300
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HNK+ D +P +F ++LT+LN+ NQLT LP+ N+ L LG
Sbjct: 383 FTNVYSINLEHNKI--DKIPYGIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGT 440
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + +D L L +L L NN + + +++ +L L +LDL +N++ +P E+ L
Sbjct: 441 NQLTKIPDD-IQCLQSLEILILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFL 499
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L N + ++ I
Sbjct: 500 RDLQKLILQSNQVTSLPRAI 519
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + LT + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 355 LLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLN 414
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N+++ + ++G +N+ L+L N+LT +P ++ L L+ L L N +K + I
Sbjct: 415 MKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASI 473
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+L L++ N+L + LPL I ++ ELNL NQLT +P C +L+ N +
Sbjct: 409 NLTKLNMKENQLTA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLL 466
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
L KL +L+L+ NKI + + +G L +L L L N++T +P + L +L
Sbjct: 467 KRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLT 526
Query: 123 SLFLGGN 129
L +G N
Sbjct: 527 YLSVGEN 533
>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
kowalevskii]
Length = 1630
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 16/138 (11%)
Query: 1 MLSHLK---TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLL 56
+LSHL+ TL+L+HNKL + + I + ++ EL+ S+N L +P + LT
Sbjct: 875 VLSHLENLVTLNLNHNKLTA----MHISLVNIKELDASHNNLVAIPNTVSQASQLT---- 926
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NKIN+ + L L L +L L +NK++ + S V L+ L +LD+SDN+L +P ++
Sbjct: 927 --NKIND-DPSITLDLKSLKVLRLTHNKLTSIPS-VDSLLELTVLDISDNKLQKIPKQIR 982
Query: 117 SLFHLKSLFLGGNPIKTV 134
L +LK L+L N IKTV
Sbjct: 983 ILKNLKELYLSNNEIKTV 1000
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLS N + + +P I ++ +L EL+L YN L+ +P C + L HL N
Sbjct: 116 LVNLQKLDLSVNNI--EEIPRTILNLCALQELDLHYNMLSTIP-C-EVGQLVHLT-DLNL 170
Query: 61 INNMENDYFLTL---TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + +TL +L L + +NK+ VS +G L+ L LDLS NE+ ++P +
Sbjct: 171 SQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIGK 230
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L LK L + N + + DI
Sbjct: 231 LKSLKMLHIDRNKLTNLPIDI 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
ML L+TLDLS N++V +P I ++SL L++ N+LT LP+ KNL + +
Sbjct: 207 MLVELRTLDLSKNEIVE--IPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSM 264
Query: 59 NKIN---------------NMENDY-------FLTLTKLSLLNLKNNKISEVSSNVGDLI 96
NKI N +N+ F+ L+KL +N+ NN I + ++G L
Sbjct: 265 NKILDFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLK 324
Query: 97 NLAILDLSDNELTDVP 112
+L LD+S N L +P
Sbjct: 325 DLKYLDISHNHLESLP 340
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
S L L+LS N + + P +++ L +++ N++ +P + L L + NKI
Sbjct: 559 SELYHLNLSCNN-IEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKI 617
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ + L +L+LL+++NN + E+ G+L L IL LS N + P +S L L
Sbjct: 618 GNIP-EPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKL 676
Query: 122 KSLFLGGNPIKTVRNDI 138
L+L GN + ++ + I
Sbjct: 677 VKLYLSGNNMTSIPSTI 693
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGF 58
L L++L +S NKL+S S+ + +++R+L +LS N++ +P K+L L +
Sbjct: 185 LKRLQSLRVSDNKLLSVSMEIGMLVELRTL---DLSKNEIVEIPSSIGKLKSLKMLHIDR 241
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ N+ D L L +N+ NKI + ++G L+NL L+ +N+L +P +L
Sbjct: 242 NKLTNLPIDIG-KLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPVSFVNL 300
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRI-ISH 148
L+ + + N I+++ I L+D K + ISH
Sbjct: 301 SKLREVNVSNNYIESLPRSIGKLKDLKYLDISH 333
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 25/153 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP----------VCTDCKN 50
L+ L+ LD+S+N L+ LP F D++ L NLS N LT P + +C
Sbjct: 473 LTQLENLDISNNNLID--LPGSFSDLKIL---NLSRNNLTEFPDNLENIQQIDISQNCLQ 527
Query: 51 LTHLLLGFNKIN--NMEN----DYFLTL---TKLSLLNLKNNKISEVSSNVGDLINLAIL 101
H+ + +K+ NM + ++ L L ++L LNL N I E+ + +L LAI+
Sbjct: 528 NIHIGMNLSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAII 587
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
D+ +N++ +P E+ ++ LK L + N I +
Sbjct: 588 DVCENKIRSIPKEIGNMNRLKELHISNNKIGNI 620
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+++ N+++ P + +L +L+LS N + +P + C L L L +N
Sbjct: 92 LTALTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCA-LQELDLHYN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ LNL N+++E+ +G+L L L +SDN+L V E+ L
Sbjct: 151 MLSTIPCEVG-QLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLV 209
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
L++L L N I + + I + + HI ++L + I+I K
Sbjct: 210 ELRTLDLSKNEIVEIPSSIGKLKSLKMLHIDRNKL----------------TNLPIDIGK 253
Query: 180 YKLDRTKTLTLCKVINIPESV 200
K + +++ K+++ PES+
Sbjct: 254 LKNLQEINMSMNKILDFPESI 274
>gi|198468166|ref|XP_002133951.1| GA27241 [Drosophila pseudoobscura pseudoobscura]
gi|198146284|gb|EDY72578.1| GA27241 [Drosophila pseudoobscura pseudoobscura]
Length = 1264
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L++LKTLDLSHN L L ++SL L +S Q T+L P D NL L L
Sbjct: 169 LTNLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSLDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D +T L LNL +N+I+E+SS++ L L+L N+LT +P L L
Sbjct: 229 NSLPKLP-DCVYNVTTLVRLNLSDNEINELSSSMESWQRLESLNLCRNQLTALPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ LF+ N +
Sbjct: 288 PKLRRLFVNDNKL 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN+L + +P LF + LT L+LS+N+L +P D KNL L L
Sbjct: 74 LTCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPDGLDRAKNLIVLNLSH 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + F+ LT L L+L +N++ + L NL LDLS N P EL L
Sbjct: 133 NQIECIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLTNLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTE---LNLSYNQLTMLPV-CTDCKNLTHLLL 56
+L ++ +D + N S + P MR ++ L L + QL +P + L HL L
Sbjct: 3 VLPFIRGVDFTKNDF-SQTFP--SSMRQMSRVQWLTLDHTQLQEVPEELGQLQKLEHLSL 59
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
N++ + + LT L L+L++N++ S + + L L LDLS N+L +VP
Sbjct: 60 NHNQLEKIFGE-LTELTCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPDG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+ +
Sbjct: 119 LDRAKNLIVLNLSHNQIECI 138
>gi|359464150|ref|ZP_09252713.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 967
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG-- 57
L +L +L+++ N+LV LP + + + L LN + N LT LP + NLT L LG
Sbjct: 4 LVNLNSLNVAGNQLVC--LPEILVQLTKLNSLNCAGNGLTSLPKGISQLINLTELGLGST 61
Query: 58 FNKINNMEN--DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
F++ N + + F LT L+ L+L N+++ + G L NL LDLS N+LT +P E
Sbjct: 62 FSERNRFTSLPEEFGQLTNLTRLDLSGNQLTSLPEEFGQLTNLTRLDLSGNQLTSLPEEF 121
Query: 116 SSLFHLKSLFLGGNPIKTV 134
L +L L L GN + ++
Sbjct: 122 GQLTNLTWLDLSGNRLTSL 140
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNL-----SYNQLTMLPV-CTDCKNLTHL 54
L+ L +L+ + N L S LP I + +LTEL L N+ T LP NLT L
Sbjct: 27 LTKLNSLNCAGNGLTS--LPKGISQLINLTELGLGSTFSERNRFTSLPEEFGQLTNLTRL 84
Query: 55 LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
L N++ ++ + F LT L+ L+L N+++ + G L NL LDLS N LT +P
Sbjct: 85 DLSGNQLTSLPEE-FGQLTNLTRLDLSGNQLTSLPEEFGQLTNLTWLDLSGNRLTSLPDF 143
Query: 115 LSSLFHLKSLFLGGNPI 131
L +L SL L NP+
Sbjct: 144 FDGLVNLNSLNLQDNPL 160
>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 367
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HL+ LDL NK+ LP I ++SL ELNLS+NQL LP + ++L L LG N
Sbjct: 82 LQHLQKLDLGFNKITV--LPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L L N+++ + +G+L NL L L++N+LT +P E+ L
Sbjct: 140 QFTALPEEIG-KLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQ 198
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ +I
Sbjct: 199 NLQKLVLNRNQLTTLPIEI 217
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L + LP+ I ++++L LNL NQLT LP +NL L LG N
Sbjct: 197 LQNLQKLVLNRNQLTT--LPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNN 254
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL L L N+++ + +G+L NL L+LS N+LT +P E+ +L
Sbjct: 255 KLTALPIE-IENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQ 313
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L++L L N + T+ +I
Sbjct: 314 KLETLDLYNNQLTTLPKEI 332
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGF 58
+ ++ L L+ KL++ LP I +++L ELNL N+LT LP + NL HL LGF
Sbjct: 37 TQVRVLHLNGKKLIA--LPEEIGQLQNLKELNLWENKLTTLP--QEIGNLQHLQKLDLGF 92
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NKI + + L L LNL N+++ + +G+L +L L L N+ T +P E+ L
Sbjct: 93 NKITVLPKEIG-QLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKL 151
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ +I
Sbjct: 152 QNLQELYLNENQLTTLPKEI 171
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
N+ T++ +L+L K+ + +G L NL L+L +N+LT +P E+ +L HL+ L
Sbjct: 30 NEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLD 89
Query: 126 LGGNPIKTVRNDILQ 140
LG N I + +I Q
Sbjct: 90 LGFNKITVLPKEIGQ 104
>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 425
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP + +++L LNL N+LT+LP +NL L LGFN
Sbjct: 70 LQNLQVLNLGFNQLTT--LPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L LNL NK++ + +G L L ILDL N+LT P E+ L
Sbjct: 128 RLTILP-DEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+R +++Q
Sbjct: 187 KLQVLNLGFNQLTTLREEVVQ 207
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +R+L LNL +N+LT+LP +NL L L N
Sbjct: 93 LQNLQVLNLYSNKLTI--LPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL +L+L+ N+++ +G L L +L+L N+LT + E+ L
Sbjct: 151 KLTILPEEIG-QLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L NP+ T+ +I Q K
Sbjct: 210 NLQILNLISNPLTTLPKEIGQLQK 233
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L++ L LP I + L +L L NQLT LP K L L LG N
Sbjct: 254 LQNLRGLNLNYTHLTI--LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL L+L++N+I+ +G L NL L+L N+LT +P E+ L
Sbjct: 312 PLRTLPKE-IEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + T+ +I Q K
Sbjct: 371 NLQELNLKFNQLATLPKEIGQQQK 394
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L+ LDL N+L + P I ++ L LNL +NQLT L +NL L L N
Sbjct: 162 LQKLQILDLEGNQLTT--FPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISN 219
Query: 60 KINNMENDY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ + + + L L LNL ++ + +G L
Sbjct: 220 PLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSK 279
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L L N+LT +P E+ L L+ L+LG NP++T+ +I Q K H++++++
Sbjct: 280 LQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQI 336
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 49 KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL 108
+NL L LGFN++ + N+ L L +LNL +NK++ + +G L NL +L+L N L
Sbjct: 71 QNLQVLNLGFNQLTTLPNEVG-QLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRL 129
Query: 109 TDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
T +P E+ L +L+ L L N + + +I Q K I ++ ++L
Sbjct: 130 TILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQL 175
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +LNL +K++ +S +G L NL +L+L N+LT +P E+ L +L+ L L N + +
Sbjct: 50 VRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTIL 109
Query: 135 RNDI 138
+I
Sbjct: 110 PKEI 113
>gi|194766690|ref|XP_001965457.1| GF22497 [Drosophila ananassae]
gi|190619448|gb|EDV34972.1| GF22497 [Drosophila ananassae]
Length = 1238
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LTCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLEKAKNLIVLNLSH 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I ++ F+ LT L L+L +N++ + LINL LDLS N P EL L
Sbjct: 133 NVIESIPTPLFIHLTDLIFLDLSHNRLETLPPQTRRLINLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL LN+S Q T+L P D NL L L
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLNMSGTQRTLLNFPTSLDTLANLVELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N I+E+S++V L L+LS N+LT +P L L
Sbjct: 229 NSLPKLP-DVVYNVVTLVRLNLSDNAINELSASVEQWQRLESLNLSRNQLTTLPAALCKL 287
Query: 119 FHLKSLFLGGNPI 131
L+ L + N +
Sbjct: 288 PKLRRLLVNDNKL 300
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTE---LNLSYNQLTMLPV-CTDCKNLTHLLL 56
+L ++ +D + N S + P MR ++ LNL QL +P + L HL L
Sbjct: 3 VLPFVRGVDFTKNDF-SKTFP--SSMRQMSRVQWLNLDRTQLAEIPEELGHLQKLEHLSL 59
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
N++ + + LT L L+L++N++ S + + L L LDLS N+L +VP
Sbjct: 60 NHNRLEKIFGE-LTELTCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LEKAKNLIVLNLSHNVIESI 138
>gi|157109148|ref|XP_001650546.1| internalin A, putative [Aedes aegypti]
gi|108879120|gb|EAT43345.1| AAEL005221-PB [Aedes aegypti]
Length = 263
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
L ELNLS N+ T P T+ ++L +L LG N++ N+ D + L L LL+L N I+
Sbjct: 119 GLKELNLSGNRFTHFPEQVTELRSLKYLYLGGNQLTNVSKDIW-KLHNLQLLSLGGNFIT 177
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
E+ VG L NL L L DN + +P ++ L HLKSL L N +K + +I+
Sbjct: 178 EIPDTVGLLNNLHALVLCDNLIEALPSSIARLVHLKSLLLHKNRLKHLPREII 230
>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
echinatior]
Length = 615
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS+L+TL LS N L + LP ++ ++SL L+L +N+L ++P V +LT L L FN
Sbjct: 179 LSNLETLALSENSLTN--LPNTLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFN 236
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++N+ LT L++L+ + NKI E+ + +G+L+NL D+S N L +P E+
Sbjct: 237 RVKYVKNN-ICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCV 295
Query: 120 HLKSL 124
L +L
Sbjct: 296 QLSTL 300
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 26/150 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN-- 59
+L L++ NKL ++LPL I ++ ELNL NQLT LP C ++L L+L N
Sbjct: 414 NLTKLNMKENKL--NTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGL 471
Query: 60 -------------KINNMENDYFLTL-------TKLSLLNLKNNKISEVSSNVGDLINLA 99
++ ++E +Y L T+L L L++NK++E+ +G L NL
Sbjct: 472 KHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNKLTELPRTIGHLRNLT 531
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L + +N+LT +P E+ +L L+SL+L N
Sbjct: 532 YLSVGENQLTYLPEEVGTLESLESLYLNDN 561
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRS--LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
++++ HN++ D +P I RS LT+LN+ N+L LP+ + L LG N++
Sbjct: 393 SINVEHNEI--DKIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTK 450
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D L L +L L NN + + + + +L L +LDL +N + +P E+ + L+
Sbjct: 451 LPDD-IQCLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQK 509
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIK 150
L L N L + R I H++
Sbjct: 510 LILQSNK--------LTELPRTIGHLR 528
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 52/190 (27%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCK----------NL 51
L TLD+ HN+L+ LP I ++ SLT L + YN+LT +P +CK +
Sbjct: 296 QLSTLDVQHNELLD--LPDTIGNLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQI 353
Query: 52 THLLLGF--------------------------------------NKINNMENDYFLTLT 73
+HL G N+I+ + F
Sbjct: 354 SHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSK 413
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L+ LN+K NK++ + ++G + + L+L N+LT +P ++ L L+ L L N +K
Sbjct: 414 NLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKH 473
Query: 134 VRNDILQDSK 143
+ I+ K
Sbjct: 474 IPTTIVNLQK 483
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 23 FIDMRS--LTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
FI R + L+LS +T LP + K+L L NK+ + + L+ L L
Sbjct: 128 FIRCREDCVRRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGY-LSNLETLA 186
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L N ++ + + + +L +L +LDL N+L +P + L L +LFL N +K V+N+I
Sbjct: 187 LSENSLTNLPNTLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKYVKNNI 245
>gi|418752836|ref|ZP_13309093.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966788|gb|EKO34628.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 222
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 26/140 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+TLDLSHN+L + LP I +++ L L+L+ NQL LP +
Sbjct: 98 LQKLQTLDLSHNRLTT--LPKEIGNLQKLQTLDLAQNQLKTLPKEIE------------- 142
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L KL L+L NN+++ + +G+L NL L+L+ N+ T +P E+ L
Sbjct: 143 ----------KLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPKEIGKLQK 192
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L+LGGNP + + +Q
Sbjct: 193 LKWLYLGGNPFLRSQKEKIQ 212
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
G NK+ + + L L LNL+ N+++ + +G+L L LDLS N LT +P E+
Sbjct: 61 GGNKLTTLPKEIG-NLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIG 119
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L++L L N +KT+ +I + K H+ + L
Sbjct: 120 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNEL 157
>gi|427735659|ref|YP_007055203.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370700|gb|AFY54656.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 245
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LS+L LD+S N+L + +S+ I +++LTELN+S N L+ LP T NLT L
Sbjct: 93 LSNLIKLDVSDNQLTKIPESI---IHLKNLTELNISDNDLSKLPESVTKLTNLTKLWSWN 149
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L+L NK++E+ + L NL ILDL +N+LT++P +S +
Sbjct: 150 NQLREIP-ESITRLINLIELDLSENKLTEIPEFISRLTNLTILDLEENQLTELPEYISYI 208
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L ++L NP++ N L+ +K+ I I+
Sbjct: 209 SGLNEIYLNNNPLE---NPSLEVAKKGIIAIR 237
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 14 KLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTL 72
KL L +F ++ L EL L N+LT +P T+ NLT L + N++ + +Y +L
Sbjct: 36 KLTEVPLEIF-EIEWLRELYLCNNKLTSIPEYITNLNNLTSLDISENQLIEIP-EYIFSL 93
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+ L L++ +N+++++ ++ L NL L++SDN+L+ +P ++ L +L L+ N ++
Sbjct: 94 SNLIKLDVSDNQLTKIPESIIHLKNLTELNISDNDLSKLPESVTKLTNLTKLWSWNNQLR 153
Query: 133 TVRNDI 138
+ I
Sbjct: 154 EIPESI 159
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+ L+ L L +NKL S +P +I ++ +LT L++S NQL +P NL L + N
Sbjct: 47 IEWLRELYLCNNKLTS--IPEYITNLNNLTSLDISENQLIEIPEYIFSLSNLIKLDVSDN 104
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L+ LN+ +N +S++ +V L NL L +N+L ++P ++ L
Sbjct: 105 QLTKIP-ESIIHLKNLTELNISDNDLSKLPESVTKLTNLTKLWSWNNQLREIPESITRLI 163
Query: 120 HLKSLFLGGN 129
+L L L N
Sbjct: 164 NLIELDLSEN 173
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 28 SLTELNLSY-------NQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L+ LNLS+ +LT +P+ + + L L L NK+ ++ +Y L L+ L+
Sbjct: 19 QLSWLNLSWVPWMYKSQKLTEVPLEIFEIEWLRELYLCNNKLTSIP-EYITNLNNLTSLD 77
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ N++ E+ + L NL LD+SDN+LT +P S+ HLK+L
Sbjct: 78 ISENQLIEIPEYIFSLSNLIKLDVSDNQLTKIP---ESIIHLKNL 119
>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 356
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L ELNL+ NQLT+LP KNL L L N+I
Sbjct: 49 KVRTLDLSANRF--KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L N+++ + +G L NL L+LS N++ +P E+ L L
Sbjct: 107 KTIPKE-IEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 165
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+SL L N + T+ +I Q
Sbjct: 166 QSLGLDNNQLTTLPQEIGQ 184
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+LS N++ ++P I+ ++ L L L NQLT LP KNL L L +
Sbjct: 92 QLKNLRKLNLSANQI--KTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 149
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 150 NQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 208
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 209 QNLQDLYLVSNQLTILPNEIGQ 230
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 162 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 220 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 279 NLQVLDLGSNQLTTLPEGIGQ 299
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 184 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 241
Query: 59 NK-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLI 96
N+ I ++N L L L +L+L +N+++ + +G L
Sbjct: 242 NRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 301
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 302 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 344
>gi|425460335|ref|ZP_18839816.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9808]
gi|389826964|emb|CCI22115.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9808]
Length = 834
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ L+ LDL HN+ +S+ + SL L L NQ++ +P T +L L L N+
Sbjct: 84 LTSLQFLDLGHNQ-ISEIPEALAYLTSLQGLYLRNNQISEIPEALTHLTSLQELYLYNNQ 142
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L L+L+NN+I E+ + L +L L LS+N++++ P L+ L +
Sbjct: 143 IREIP-EALSHLTSLQSLDLRNNQIREIPEALAHLTSLQYLYLSNNQISETPEALAHLVN 201
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L L NPI V +I++
Sbjct: 202 LKRLVLQNNPITNVPPEIIR 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
+ L+LS L ++ P + SL LNLS NQ++ +P +L HL L N+I +
Sbjct: 19 RELNLSGRNL-TEIPPEIAQLTSLQYLNLSNNQISEIPEALAHLTSLQHLNLYNNQIREI 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ F LT L L+L +N+ISE+ + L +L L L +N+++++P L+ L L+ L
Sbjct: 78 P-EAFAHLTSLQFLDLGHNQISEIPEALAYLTSLQGLYLRNNQISEIPEALTHLTSLQEL 136
Query: 125 FLGGNPIKTV 134
+L N I+ +
Sbjct: 137 YLYNNQIREI 146
>gi|328773976|gb|EGF84013.1| hypothetical protein BATDEDRAFT_21667 [Batrachochytrium
dendrobatidis JAM81]
Length = 485
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGF 58
ML +L+ LD+SHN++ + LP+ + D+ L L L +N LT +P L L L F
Sbjct: 100 MLKNLQRLDISHNQI--EELPIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSF 157
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++N + + L+ L LN+ NN + VS+ +G L +L L+L+ N++T +P EL +L
Sbjct: 158 NRITEIDNQFGM-LSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPDELGNL 216
Query: 119 FHLKSLFLGGN 129
L+ ++ N
Sbjct: 217 LSLEEFYIQDN 227
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 8 LDLSHNKL-VSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
++ SHNKL +S P +++L L++S+NQ+ LP+ D L L L N + +
Sbjct: 82 INASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVADLSRLKTLELHHNMLTAIP 141
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
L L+ L LNL N+I+E+ + G L L L++S+N L +V E+ +L L L
Sbjct: 142 AG-VLKLSGLEKLNLSFNRITEIDNQFGMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLN 200
Query: 126 LGGNPIKTVRNDI 138
L N I + +++
Sbjct: 201 LASNQITMLPDEL 213
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNL-----------------------SYN 37
L +L LDL N+L S ++P I D +S+T L L SYN
Sbjct: 310 LRNLTRLDLRKNQLSSFAIPYTITDWKSITHLQLGNNSFEIIPEEICQLYSLIDLDFSYN 369
Query: 38 QLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
L LP L L L NKI ++ + L L L L ++ N +S + +G+L
Sbjct: 370 MLVGLPKQIGKLTQLVKLCLNNNKIESLTTEIAL-LKSLQTLEIRFNALSRLPPEIGELS 428
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+L LD+S+N+L D+P EL L +L L GN V
Sbjct: 429 SLLKLDISENQLVDLPPEL-YLLEGVTLELKGNHFDAV 465
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
+L L++S+ +L+ + L +L+ NQL +P L L + N IN
Sbjct: 10 NLSELNISNQQLLEIKPAMLKIHPDLVKLSAHKNQLVDIPSDIVLLSKLQILDISGNNIN 69
Query: 63 NMENDYFLTLTKLSLLNLKNNK--ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
N ++ ++T ++N +NK IS ++ +G L NL LD+S N++ ++P E++ L
Sbjct: 70 NFPHNLPPSIT---IINASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVADLSR 126
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK+L L N + + +L+
Sbjct: 127 LKTLELHHNMLTAIPAGVLK 146
>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
[Saccoglossus kowalevskii]
Length = 1212
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 9/140 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCT-DCKNLTHLLLGF 58
H+K L+L +N+L SD L +MR+LT+L ++S N+L +P NL HL+L
Sbjct: 752 GHIKKLNLQNNRL-SD---LPDEMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSG 807
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+I+ ++++ LTKL LL++K N I+++ +G L L +LDL DN++ ++P EL+SL
Sbjct: 808 TRISIVDSN-ICNLTKLELLDVKGNVITKLPPELGALDKLEVLDLQDNDIHNLPRELTSL 866
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L L + NPI+ DI
Sbjct: 867 KKLTKLCVERNPIEEPPYDI 886
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
+ L ++LS N + LP + + R + ++ L N+L+ LP ++ L L L NK
Sbjct: 571 TSLDEMNLSGNGFIC--LPASVGEYRHIKKIILGGNKLSELPETISELTQLEILDLSHNK 628
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L+ LS L+++ N+IS + N+G L L LD+S+N L+ +P E+ L +
Sbjct: 629 LKEIPSSLF-DLSNLSHLDIRGNQISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTN 687
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK L +GGN IK DI
Sbjct: 688 LKILDIGGNDIKCPPMDI 705
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 25 DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
D + + +L LS N+LT LP + + L L L NK++ + L LT L+ LNL
Sbjct: 433 DYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDEIPR-CVLQLTNLTYLNLNG 491
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
N I +S ++ L L LDL+ N++ + EL+ L L++L +GGNPI+
Sbjct: 492 NVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELPILETLQVGGNPIE 541
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 5 LKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
L LD+S N+L S +++ +F L +LN+S N++ + LT+L + N I
Sbjct: 1023 LTKLDVSKNRLTSFRENVGMF---EKLQQLNISINEIKSIDGIHQLCMLTYLNIENNPIK 1079
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L++L NN ++ + S++ L+ L +DLS NE+T +P E+ SL L
Sbjct: 1080 QIPQE-ISKLKTLTVLKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLT 1138
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+L L N ++++ ++ Q + +K RLD
Sbjct: 1139 TLNLCSNKLESLPRELGQ-----LPALKDIRLD 1166
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ L+ +DLS NKLV P + + L+ L+LS N +T LP +C+ L+HL
Sbjct: 254 MEQLQEIDLSCNKLVHFP-PSLMKLTRLSVLDLSENAMTSLPNEICS----LSHL----Q 304
Query: 60 KINNMENDYFL------TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
K+N N+ + +T+L+ L ++ I + +G++ NL +LDL+ N +T +P
Sbjct: 305 KLNISGNNIGVLPLAMGEMTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPR 364
Query: 114 ELSSLFHLKSLFLGGNPI 131
EL L LK L + GN I
Sbjct: 365 ELKKLSKLKELIIDGNSI 382
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L+ L+LS NK LP + +++ L+ L++S NQL++ V +D N+ + L N
Sbjct: 954 LTDLEELNLSRNKF--PELPSIILNLSKLSMLDVSDNQLSV--VSSDIGNIKEVDLSHNS 1009
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ + N+ + KL+ L++ N+++ NVG L L++S NE+ + + L
Sbjct: 1010 ISIITNETNHSY-KLTKLDVSKNRLTSFRENVGMFEKLQQLNISINEIKSIDG-IHQLCM 1067
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L + NPIK + +I
Sbjct: 1068 LTYLNIENNPIKQIPQEI 1085
>gi|326664141|ref|XP_003197743.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Danio rerio]
Length = 524
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 29/185 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L S LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAIL----------------- 101
++ ++ + F L KL+ L+L++N++ +V+ ++ LI+L L
Sbjct: 198 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVNTLEWT 257
Query: 102 -------DLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
D S+NE+ + P S+ L +L L N + + IL DS +S I S
Sbjct: 258 WDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRIL-DSWTSLSSITLSG 316
Query: 154 LDYHC 158
D+ C
Sbjct: 317 NDWEC 321
>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ LDL N+L + LP I+ +++LTELNL+ NQ T +P KNL L +G N
Sbjct: 64 LKKLRVLDLRGNQLTT--LPKEIEQLQNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L +L+L NNK++ + + + L NL L LS+N+LT +P E+ L
Sbjct: 122 QLKTLPKDIG-KLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPEEIGKLK 180
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L N + T+ N+I
Sbjct: 181 NLTKLDLNYNELTTLPNEI 199
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDL++N+L + LP I +++L EL L YNQLT+LP + + LT L L +N
Sbjct: 179 LKNLTKLDLNYNELTT--LPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYN 236
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL++L L++N++ + +G L L LDLS N+LT +P E+ L
Sbjct: 237 QFKTLPKEIG-ELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQ 295
Query: 120 HLKSLFLGGNP 130
+L+ L+L P
Sbjct: 296 NLRKLYLDDIP 306
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L LS N+L LP I +++LT+L+L+YN+LT LP +NL L LG+N
Sbjct: 156 LQNLQKLYLSENQLTI--LPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYN 213
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL++L L N+ + +G+L L +L L N+L P E+ L
Sbjct: 214 QLTVLPKE-IRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQLKMFPNEIGKLK 272
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+SL L N + T+ +I
Sbjct: 273 ELESLDLSHNQLTTLPKEI 291
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 28/155 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS+NKL + LP I +++L +L LS NQLT+LP KNLT L L +N
Sbjct: 133 LKNLQVLHLSNNKLAT--LPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYN 190
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ +G L NL L L N+LT +P E+ L
Sbjct: 191 ELTTLPNE------------------------IGKLQNLQELTLGYNQLTVLPKEIRELQ 226
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L+L N KT+ +I + K + ++++++L
Sbjct: 227 KLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQL 261
>gi|76162154|gb|ABA40156.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 257
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L L LS N+L S +F + LT L+L+ NQLT LPV LT+L L N
Sbjct: 76 LTQLTYLSLSDNQLSSIPAGVFDSLMQLTYLDLAVNQLTALPVGVFDSLTQLTYLTLRNN 135
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ + F +L L L+L N++S + V D L+NL LDL +N+L +P +
Sbjct: 136 QLTALPEGVFDSLVNLQQLHLYQNQLSALPPGVFDRLVNLQTLDLHNNQLKSIPRGAFDN 195
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
L L ++L NP +DIL S + H + C +
Sbjct: 196 LKSLTHIWLSSNPWDCACSDILYLSGWLGQHAGKEQGQAVCSGTN 240
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L L NKL F + LT L+LS NQL+ +P V LT+L L N
Sbjct: 52 LAALTELKLHSNKLKDIPSGAFHKLTQLTYLSLSDNQLSSIPAGVFDSLMQLTYLDLAVN 111
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SS 117
++ + F +LT+L+ L L+NN+++ + V D L+NL L L N+L+ +P +
Sbjct: 112 QLTALPVGVFDSLTQLTYLTLRNNQLTALPEGVFDSLVNLQQLHLYQNQLSALPPGVFDR 171
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
L +L++L L N +K++ D+ + ++HI S + C D
Sbjct: 172 LVNLQTLDLHNNQLKSIPRGAF-DNLKSLTHIWLSSNPWDCACSD 215
>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 400
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L + +TL LS N+L + LP I +++L EL L+ NQ T P KNL L L N
Sbjct: 114 LQNFQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYAN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L+L N++ +S+ +G L NL +LDL+DN+L +P E+ L
Sbjct: 172 QLKTLPNEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N KTV +I Q
Sbjct: 231 NLQVLDLNNNQFKTVPEEIGQ 251
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L +LP I +++L L+L+ NQ +P KNL L LG+N
Sbjct: 206 LQNLQVLDLNDNQL--KTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L +L L NN++ +S+ +G L NL +L L+ N+LT +P E+ L
Sbjct: 264 QFKTVSEEIG-QLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 323 NLRELHLSYNQLKTLSAEIGQ 343
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L+ N+ + P I +++L +LNL NQL LP +NL L L +N
Sbjct: 137 LKNLRELYLNTNQFTA--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L +N++ + +G L NL +LDL++N+ VP E+ L
Sbjct: 195 QLKTLSAEIG-QLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLK 253
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N KTV +I Q
Sbjct: 254 NLQVLDLGYNQFKTVSEEIGQ 274
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L++N+L + LP I +++L LNL NQLT LP +N L+L N
Sbjct: 68 LQNLQVLELNNNQLAT--LPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+ + +G L NL L+L N+L +P E+ L
Sbjct: 126 RLTTLPKEIG-QLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 185 NLRELHLSYNQLKTLSAEIGQ 205
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL +N K VS+ + +++L L L+ NQL L KNL L L
Sbjct: 252 LKNLQVLDLGYNQFKTVSEEIG---QLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNA 308
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N++ + N+ L L L+L N++ +S+ +G L NL L L DN+LT +P E+
Sbjct: 309 NQLTTLPNE-IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364
>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
Length = 1162
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 8 LDLSHNKLVS---DSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
LDLSH K S L L+ D+R L NL +++LT++P +C L L L FNKI+
Sbjct: 187 LDLSHKKHKSIDLSRLGLYKDLRIL---NLKHSELTIVPSEIGECHELQKLDLSFNKISK 243
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L +L+ LN+++N ++ V +G L ++ L+LS N++ +P L +L L
Sbjct: 244 IPESLY-ALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTE 302
Query: 124 LFLGGNPIKTVRNDI 138
L +G N + ++ ++I
Sbjct: 303 LNMGSNALTSIPDEI 317
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMEN 66
LDLS+ K S L + L LNL + +LT++P +C L L L FNKI +
Sbjct: 913 LDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIP- 971
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D L KL+ +N+ +N ++ + + L ++ L+LS N++ +P L +L L+ L +
Sbjct: 972 DSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNM 1031
Query: 127 GGNPIKTVRNDILQ 140
GN + + + LQ
Sbjct: 1032 NGNALTAIPSVKLQ 1045
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L+ LDLS NK+ L+ + LTELN+ N LT +P K++ L L NKI
Sbjct: 230 ELQKLDLSFNKISKIPESLYA-LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIE 288
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL+ LN+ +N ++ + +G L ++ LDLS N++ +P L +L L
Sbjct: 289 KIPAS-LCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLT 347
Query: 123 SLFLGGNPIKTVRNDI 138
L++ N + +V ++I
Sbjct: 348 ELYMNDNALTSVPDEI 363
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 32/163 (19%)
Query: 2 LSHLKTLDLSHNKL--VSDSL-------PLFID-------------MRSLTELNLSYNQL 39
L ++TLDLS NK+ + DSL L+++ ++S+ LNLS N++
Sbjct: 320 LKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKI 379
Query: 40 TMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+P CT + LT L + +N + + D L +++LNL NNK+ ++ ++ L
Sbjct: 380 EKIPASLCT-LEQLTELDMKYNALTAIP-DEISKLKSMNILNLDNNKMEKIPDSLCALQQ 437
Query: 98 LAILDLSD------NELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L LD++D N LT +P E+S L +K L L N +K +
Sbjct: 438 LTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKI 480
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGF 58
L L L++ N L S +P I ++S+ LNLS N++ +P C LT L++
Sbjct: 625 LEQLTELNMRSNALTS--VPDEIGKLKSMKTLNLSSNKIEKIPASLCA-LDQLTELIMRS 681
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D L + +LNL NNK+ ++ ++ L L LD+ N LT +P E+ L
Sbjct: 682 NALTAIP-DEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKL 740
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+K L L N ++ + + +
Sbjct: 741 KSMKILNLDNNKMEKIPDSL 760
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +K L+L +NK+ + DSL + LT+LN+ +N LT +P K++T L L F
Sbjct: 740 LKSMKILNLDNNKMEKIPDSL---CALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSF 796
Query: 59 NKINNMENDYFLTLTKLSLLNLK--NNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NKI + + + KL L++L+ NK+ E V + + L L L N+L VP +
Sbjct: 797 NKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIG 856
Query: 117 SLFH 120
L
Sbjct: 857 RLLR 860
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
HL+ L+L H +L +P I + L +L LS+N++ +P +C + LT + +G N
Sbjct: 933 HLRMLNLEHGELTI--VPSEIGECHKLQKLELSFNKIAKIPDSLCA-LEKLTEINMGSNA 989
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ ++ D L + LNL NKI+++ ++ L L IL+++ N LT +P
Sbjct: 990 LTSIP-DEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIP 1040
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 26 MRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++S+ LNL N++ +P C + LT L + N + ++ D L + +LNL N
Sbjct: 464 LKSMKILNLDNNKMKKIPASLCA-LQQLTELYMNGNALTSIP-DEISKLKSMKILNLYFN 521
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
KI ++ ++ L L L+++ N LT +P E+S L +K L L N +K +
Sbjct: 522 KIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKI 572
>gi|417780106|ref|ZP_12427878.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410779793|gb|EKR64400.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 189
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +++L S LP I +++L ELNL NQL LP+ +NL L LG N
Sbjct: 62 LQTLEWLNLGYSELTS--LPKEIGQLQNLQELNLWANQLASLPMEIGQLQNLQTLDLGDN 119
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ L L LNL N++S + +G L NL ILDL DN LT +P E+ L
Sbjct: 120 QLTSIPKKIG-QLQNLQRLNLGGNQLSSLPMEIGQLKNLQILDLGDNRLTSLPKEIGQLQ 178
Query: 120 HLKSLFLG 127
+L+ L LG
Sbjct: 179 NLQELNLG 186
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 26/139 (18%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
S ++ L L+H L S LP I +++L LNL Y++LT LP +I
Sbjct: 40 SKVRVLGLAHQPLTS--LPKEIRQLQTLEWLNLGYSELTSLP---------------KEI 82
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++N L LNL N+++ + +G L NL LDL DN+LT +P ++ L +L
Sbjct: 83 GQLQN--------LQELNLWANQLASLPMEIGQLQNLQTLDLGDNQLTSIPKKIGQLQNL 134
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L LGGN + ++ +I Q
Sbjct: 135 QRLNLGGNQLSSLPMEIGQ 153
>gi|328875780|gb|EGG24144.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
Length = 2671
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L HL+ L+L HN L+S P F ++ L L++ NQ T LP L L+L N
Sbjct: 1186 LIHLENLNLGHN-LLSLLPPTFANLSKLKTLSMEGNQFTSLPNEILQLSQLQELILENNL 1244
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ +D L+ L +LNL+ NK+ + +++G L NL IL+L+ N +T + + L
Sbjct: 1245 IGSLPSD-INHLSNLRILNLRLNKLDILPASIGQLSNLTILNLAQNAITQLRPTMGLLSG 1303
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
L L L GNP++T +IL Q + I+ ++K
Sbjct: 1304 LSELKLDGNPLRTPPPEILHQGLQAILDYLK 1334
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 29/168 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-----DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLG 57
+L+ L+L N++VS S PL + + +LT LNL NQ LP+ T L L +
Sbjct: 1068 NLEVLNLEENQIVSMS-PLNVALLAQSLPNLTVLNLGSNQFDDLPMTLTKFAKLQVLSIP 1126
Query: 58 FNKINNMEN--DYFLTLTKLSL--------------------LNLKNNKISEVSSNVGDL 95
NK + + + D+ TL +L + LNL + I+ + +G+L
Sbjct: 1127 NNKFDRVPDVLDHLTTLVELDMSKCQVASIKIPLASKATLTSLNLSHTDITSLPEEIGEL 1186
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
I+L L+L N L+ +P ++L LK+L + GN ++ N+ILQ S+
Sbjct: 1187 IHLENLNLGHNLLSLLPPTFANLSKLKTLSMEGNQFTSLPNEILQLSQ 1234
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 1 MLSHLKTL---DLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLG 57
+L HL TL D+S ++ S +PL +LT LNLS+ +T LP + L HL
Sbjct: 1136 VLDHLTTLVELDMSKCQVASIKIPL-ASKATLTSLNLSHTDITSLP--EEIGELIHL--- 1189
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
EN LNL +N +S + +L L L + N+ T +P E+
Sbjct: 1190 -------EN-----------LNLGHNLLSLLPPTFANLSKLKTLSMEGNQFTSLPNEILQ 1231
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L L+ L L N I ++ +DI S I +++ ++LD
Sbjct: 1232 LSQLQELILENNLIGSLPSDINHLSNLRILNLRLNKLD 1269
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 29 LTELNLSYNQLTMLP----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
LT L+LS +L MLP NL L L N +N + F ++ L +LNL+ N+
Sbjct: 1019 LTMLDLSSLRLYMLPESKFALRKMTNLVQLSLAKNNLNTIPIGCFSSMVNLEVLNLEENQ 1078
Query: 85 ISEVSS-NVG----DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
I +S NV L NL +L+L N+ D+P L+ L+ L + N V
Sbjct: 1079 IVSMSPLNVALLAQSLPNLTVLNLGSNQFDDLPMTLTKFAKLQVLSIPNNKFDRV 1133
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 36/160 (22%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLP-----VCTDCKNLTHLL 55
+++L L L+ N L + + F M +L LNL NQ+ +M P + NLT L
Sbjct: 1042 MTNLVQLSLAKNNLNTIPIGCFSSMVNLEVLNLEENQIVSMSPLNVALLAQSLPNLTVLN 1101
Query: 56 LGFNKINNMENDYFLTLT---KLSLLNLKNNKISEVSSNVGDLINLAILD---------- 102
LG N+ +++ +TLT KL +L++ NNK V + L L LD
Sbjct: 1102 LGSNQFDDLP----MTLTKFAKLQVLSIPNNKFDRVPDVLDHLTTLVELDMSKCQVASIK 1157
Query: 103 -------------LSDNELTDVPCELSSLFHLKSLFLGGN 129
LS ++T +P E+ L HL++L LG N
Sbjct: 1158 IPLASKATLTSLNLSHTDITSLPEEIGELIHLENLNLGHN 1197
>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
Length = 394
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S +P I +L E LNL NQLT +P +L L+L N
Sbjct: 233 LASLKFLHLQGNQLAS--VPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L+ L LNL+ N+++ V + +G L +L +L LS N+LT VP E+ L
Sbjct: 291 QLTSVPAEIG-QLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLA 349
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N + +V I
Sbjct: 350 SLEWLWLNNNELTSVPAAI 368
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L+ L+L N+L S +P I + SL EL L NQLT +P +L L L N
Sbjct: 49 LSALRKLNLGRNQLTS--VPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESN 106
Query: 60 KINNMEND---------YFLT-------------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ ++ + ++L+ LT L L+L N+++ V + + +
Sbjct: 107 QLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITA 166
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L L++N+LT +P E+ L LK L LGGN + +V DI Q
Sbjct: 167 LEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQ 209
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S +P I +L E L+L NQLT +P +L L L N
Sbjct: 187 LTSLKELGLGGNQLTS--VPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGN 244
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L LNL++N+++ V + +G L +L L LS N+LT VP E+ L
Sbjct: 245 QLASVPAEIG-QLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLS 303
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L L N + +V +I Q + + H+ ++L
Sbjct: 304 SLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQL 338
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL LS NQLT LP L L L N
Sbjct: 95 LTSLEVLYLESNQLTS--VPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + +T L L L N+++ + + +G L +L L L N+LT VP ++ L
Sbjct: 153 QLTSVPAEIW-QITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLT 211
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L N + +V +I Q + H++ ++L
Sbjct: 212 LLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQL 246
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L+ L L N+L S +P I + SL L+L NQL +P + LT LL G N
Sbjct: 210 LTLLEGLSLDSNQLTS--VPAEIGQLASLKFLHLQGNQLASVPA--EIGQLT-LLEGLNL 264
Query: 61 INNMENDYFLTLTKLSLLN---LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N + +L+ L L N+++ V + +G L +L L+L N+LT VP E+
Sbjct: 265 ESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQ 324
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L LK L L N + +V +I Q
Sbjct: 325 LASLKLLHLSYNQLTSVPAEIWQ 347
>gi|320166970|gb|EFW43869.1| ubiquitin ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1341
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
L L+ L+LS N +V +S+ + LT+L +S N+L LP +C C L L
Sbjct: 155 LGSLERLNLSDNAIVELGESVG---RLSRLTQLIISGNRLRKLPADICC-CTQLVVLNAS 210
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N+++ + +F L L L L++N + + N+ L L LDLSDN L DVP EL
Sbjct: 211 ANQLSELPQLFFTFLHNLQSLQLQHNALHSLPQNINKLEQLTHLDLSDNMLQDVPAELGL 270
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L L+ + + N + T+ ++Q +RI
Sbjct: 271 LTRLQFVSVARNAMTTLPPSLIQLQRRI 298
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E + +L+ LNL +N + V ++ +L +L L+LSDN + ++ + L L L
Sbjct: 125 EAAFHFGFQRLTRLNLSSNHLVSVPDSIRNLGSLERLNLSDNAIVELGESVGRLSRLTQL 184
Query: 125 FLGGNPIKTVRNDI 138
+ GN ++ + DI
Sbjct: 185 IISGNRLRKLPADI 198
>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
Length = 738
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +++L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN +KT+ +I Q K
Sbjct: 233 NLQELDLNGNQLKTLPKEIGQLQK 256
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 208 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIE 376
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 567 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 624
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 625 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 684 HNLTELYLQYNRIKTLPEEI 703
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLGDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L LNL++N+++ + +G L NL L+L N LT +P E+ L +
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 188 LQTLNLQDNQLATLPVEIGQ 207
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 309 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 367 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 472
>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 738
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +++L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN +KT+ +I Q K
Sbjct: 233 NLQELDLNGNQLKTLPKEIGQLQK 256
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 208 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIE 376
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 567 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 624
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 625 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 684 HNLTELYLQYNRIKTLPEEI 703
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLGDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L LNL++N+++ + +G L NL L+L N LT +P E+ L +
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 188 LQTLNLQDNQLATLPVEIGQ 207
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 309 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 367 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 472
>gi|418721878|ref|ZP_13281050.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410741675|gb|EKQ90430.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 201
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+ +L+ L+L N+L + LP I ++++L ELNL+ NQL LP +NL L L N
Sbjct: 1 MQNLRILNLYRNQLTT--LPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAEN 58
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L++L+L+NN++ + ++G L NL +LDL N+LT +P E+ L
Sbjct: 59 QLKTLPNEIG-ELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLK 117
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L L N + T+ +I + K I ++ + L
Sbjct: 118 NLTKLDLNYNELTTLPKEIGELQKLTILDLRNNEL 152
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ N+L +LP I +++L EL L+ NQL LP + +NLT L L N
Sbjct: 24 LQNLRELNLTKNQL--KTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNN 81
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L++L+L N+++ + +G L NL LDL+ NELT +P E+ L
Sbjct: 82 ELKTIPKDIG-KLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQ 140
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L N +KT+ N+I
Sbjct: 141 KLTILDLRNNELKTIPNEI 159
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L +LP I ++++LT L+L N+L +P KNLT L L N
Sbjct: 47 LQNLRELRLAENQL--KTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHIN 104
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L+L N+++ + +G+L L ILDL +NEL +P E+ L
Sbjct: 105 QLTTLPKEIG-KLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTIPNEIGKLK 163
Query: 120 HLKSLFLGGNP 130
L+ L+L P
Sbjct: 164 ELRKLYLDDIP 174
>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 511
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 26 MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L ELNL NQL LP +NL L L N++ + + TL L LNL+NN+
Sbjct: 60 LQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVG-TLQNLRELNLENNQ 118
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
++ + + +G L NL L+L +N L +P E+ L L+ L+LGGN ++T+ +I LQD
Sbjct: 119 LATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQD 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L LK L L++N+L LP I + L +L L NQLT LP + L +L L N
Sbjct: 336 LQKLKWLILANNQLTV--LPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANN 393
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L NN++ + +G L L LDLS+N+L +P E+ L
Sbjct: 394 QLRLLPEEIG-KLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLE 452
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L+ L L GNP T +I+
Sbjct: 453 KLEDLDLSGNPFTTFPKEIV 472
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L +LP I ++ L EL+LS +QL P ++L L+L N
Sbjct: 152 LQKLERLYLGGNQL--RTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSN 209
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L+NN+++ + + +G L NL L+LS+N+L +P E+ +L
Sbjct: 210 QLVVLSQEIG-KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALE 268
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +T+ I Q
Sbjct: 269 NLQNLHLYSNQFRTLPKQIWQ 289
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 28/149 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L+ L L +N+L +LP + +++L ELNL NQL LP N
Sbjct: 82 QLENLQVLSLYNNRL--RTLPQEVGTLQNLRELNLENNQLATLP---------------N 124
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I +EN L LNL NN++ + +G L L L L N+L +P E+ +L
Sbjct: 125 GIGQLEN--------LQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQ 176
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
L+ L L + +KT +I L+ KR+I
Sbjct: 177 DLEELHLSRDQLKTFPEEIGKLRSLKRLI 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+LS+N+LV+ LP I + +L L+L NQ LP +NL L L N
Sbjct: 244 LQNLEELNLSNNQLVT--LPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHN 301
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N++ + +G L L L L++N+LT +P E+ L
Sbjct: 302 QLTVLPQEIG-QLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLE 360
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+L N + T+ +I + K
Sbjct: 361 KLEDLYLEDNQLTTLPKEIWKLEK 384
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 9 DLSHNKLVSDSLPLFID----MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
DL L D L F + +RSL L L NQL +L ++L L+L N++
Sbjct: 177 DLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLAT 236
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ N+ L L LNL NN++ + +G L NL L L N+ +P ++ L +L+
Sbjct: 237 LPNEIG-KLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQD 295
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + + +I Q
Sbjct: 296 LHLAHNQLTVLPQEIGQ 312
>gi|456889972|gb|EMG00842.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 290
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LD N+L + LP I ++++L L L YN+ LP + +NL L L N
Sbjct: 100 LQNLKVLDSGLNELTT--LPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKN 157
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + + + L KL +LNL +NK+ + +G+L NL L+LSDN+L +P E+ +L
Sbjct: 158 KFKTLPKEIW-NLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQ 216
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L GN + T+ +I
Sbjct: 217 NLQELHLSGNQLMTLPKEI 235
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDL NK +LP I +++ L LNLS+N+L LP + +NL +L L N
Sbjct: 146 LQNLGLLDLEKNKF--KTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDN 203
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G+L NL L LS N+L +P E+ +L
Sbjct: 204 QLMTLPKEIG-NLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQ 262
Query: 120 HLKSLFLGGNPI 131
+L+ L L GN +
Sbjct: 263 NLQELHLSGNQL 274
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL NK+ + +G+L NL +LD NELT +P E+ L +L L L N
Sbjct: 77 LQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYNKF 136
Query: 132 KTVRNDI 138
KT+ +I
Sbjct: 137 KTLPKEI 143
>gi|421092601|ref|ZP_15553333.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410364452|gb|EKP15473.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LD N+L + LP I ++++L L L YN+ LP + +NL L L N
Sbjct: 110 LQNLKVLDSGLNELTT--LPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + + + L KL +LNL +NK+ + +G+L NL L+LSDN+L +P E+ +L
Sbjct: 168 KFKTLPKEIW-NLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQ 226
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L GN + T+ +I
Sbjct: 227 NLQELHLSGNQLMTLPKEI 245
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDL NK +LP I +++ L LNLS+N+L LP + +NL +L L N
Sbjct: 156 LQNLGLLDLEKNKF--KTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDN 213
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G+L NL L LS N+L +P E+ +L
Sbjct: 214 QLMTLPKEIG-NLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQ 272
Query: 120 HLKSLFLGGNPI 131
+L+ L L GN +
Sbjct: 273 NLQELHLSGNQL 284
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL NK+ + +G+L NL +LD NELT +P E+ L +L L L N
Sbjct: 87 LQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYNKF 146
Query: 132 KTVRNDI 138
KT+ +I
Sbjct: 147 KTLPKEI 153
>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
Length = 738
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +++L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN +KT+ +I Q K
Sbjct: 233 NLQELDLNGNQLKTLPKEIGQLQK 256
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 208 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIE 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 567 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 624
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 625 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 684 HNLTELYLQYNRIKTLPEEI 703
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLGDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L LNL++N+++ + +G L NL L+L N LT +P E+ L +
Sbjct: 129 LITFPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 188 LQTLNLQDNQLATLPVEIGQ 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 309 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 367 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 472
>gi|193713884|ref|XP_001950762.1| PREDICTED: slit homolog 2 protein-like isoform 1 [Acyrthosiphon
pisum]
gi|328726596|ref|XP_003248960.1| PREDICTED: slit homolog 2 protein-like isoform 2 [Acyrthosiphon
pisum]
Length = 1293
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L L+L HN+L +F D+ SL LNL +N + ML NL L L FN
Sbjct: 340 LVRLVVLNLGHNQLSKIDSHVFQDLYSLQILNLEHNNIEMLADQAFAALSNLHALTLSFN 399
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
K+ ++E +F L ++ L L N+I V + + NL L L N L VP LS L
Sbjct: 400 KLKHIEPLHFSGLYVINQLFLDRNRIDTVDEHAFQNCTNLHDLGLYGNALRQVPAALSKL 459
Query: 119 FHLKSLFLGGNPIKTVRN 136
LK+L LGGN I+ V+N
Sbjct: 460 HMLKTLDLGGNVIRHVKN 477
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT--------------MLPVCTD 47
L L+ LDLS N + + LF + L LNL+ N+L P T
Sbjct: 158 LVQLRELDLSDNNIWNLPKELFCPLVGLANLNLTKNRLQDVFELGFSDWGNGPTAPGKTC 217
Query: 48 CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN--VGDLINLAILDLSD 105
L L L N I +M ++ +L L L L+ N+I++++ VG L +L +L++S
Sbjct: 218 NTALEDLNLANNDIISMPDNGLTSLRALKKLYLQENQINQIADRAFVG-LTSLNVLNVSS 276
Query: 106 NELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQ 140
N L+ +P EL S +L+ ++L N I + +L+
Sbjct: 277 NRLSALPPELFHSTRYLREIYLHNNSINVLAPGLLE 312
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 28 SLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+L +LNL+ N + +P T + L L L N+IN + + F+ LT L++LN+ +N++
Sbjct: 220 ALEDLNLANNDIISMPDNGLTSLRALKKLYLQENQINQIADRAFVGLTSLNVLNVSSNRL 279
Query: 86 SEV-------------------SSNV------GDLINLAILDLSDNELTDVPCE---LSS 117
S + S NV L L +LD+S NELT S
Sbjct: 280 SALPPELFHSTRYLREIYLHNNSINVLAPGLLEGLDQLLVLDMSHNELTSTWVNRDTFSG 339
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L L LG N + + + + QD
Sbjct: 340 LVRLVVLNLGHNQLSKIDSHVFQD 363
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 54/194 (27%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L LK L L N++ + F+ + SL LN+S N+L+ LP + + L + L N
Sbjct: 242 LRALKKLYLQENQINQIADRAFVGLTSLNVLNVSSNRLSALPPELFHSTRYLREIYLHNN 301
Query: 60 KINNME--------------------------NDYFLTLTKLSLLNLKNNKISEVSSNV- 92
IN + D F L +L +LNL +N++S++ S+V
Sbjct: 302 SINVLAPGLLEGLDQLLVLDMSHNELTSTWVNRDTFSGLVRLVVLNLGHNQLSKIDSHVF 361
Query: 93 ------------------------GDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLG 127
L NL L LS N+L + P S L+ + LFL
Sbjct: 362 QDLYSLQILNLEHNNIEMLADQAFAALSNLHALTLSFNKLKHIEPLHFSGLYVINQLFLD 421
Query: 128 GNPIKTVRNDILQD 141
N I TV Q+
Sbjct: 422 RNRIDTVDEHAFQN 435
>gi|115449939|ref|NP_001048588.1| Os02g0826600 [Oryza sativa Japonica Group]
gi|48716443|dbj|BAD23050.1| putative disease resistance protein Hcr2-5D [Oryza sativa Japonica
Group]
gi|113538119|dbj|BAF10502.1| Os02g0826600 [Oryza sativa Japonica Group]
Length = 586
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
S L L+L NKLV+ S +F+ LTE+N + N LT +P
Sbjct: 160 SKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
DC +L +G N + ++ D + L+ L +L+L +N++ E L L
Sbjct: 220 TLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGM-LSNLGILDLHSNQLKEYPVGACRL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL ++ L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSD- 336
Query: 159 QNVDGGGMSSQE-----STSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+ G G + + + +++ +LD L+ V ++P + +
Sbjct: 337 EGASGSGSTPTKDDQIAAARRLSLSSKELD----LSGLGVTSVPPAAW 380
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+ELN S N +++LP C L L L NK+ + + F++ T L+ +N N ++
Sbjct: 139 LSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTA 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ +G L L LDL N++T +P + L ++G N + ++ DI
Sbjct: 199 IPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDI 249
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FHLKSLFLGGNPIKTVRND 137
+L N ++ V + DL +L LDLSDN +T +P EL L +L+ L L GNP++++R
Sbjct: 507 DLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRSIRRT 566
Query: 138 ILQ-DSKRIISHIK 150
+L+ +K I+ ++K
Sbjct: 567 LLERGTKAILKYLK 580
>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
kowalevskii]
Length = 679
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
++++ HN + +F + LT+LN+ NQLT LP+ ++ L LG N+++ +
Sbjct: 319 SINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLP 378
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D LT L +L L NN + ++ +G+L + +LDL +N+L +P E++ L L+ L
Sbjct: 379 ED-IQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLV 437
Query: 126 LGGNPIKTVRNDI 138
L N + T+ +I
Sbjct: 438 LQSNQLSTLPRNI 450
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS+L+ L LS N L S LP+ ++ ++ + L+L +N+L +P V +LT L L FN
Sbjct: 105 LSNLQKLALSENSLTS--LPVSLERLKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I++++ + LT L++L+L+ NKI ++ +G+L +L D+S N L +P E+ +
Sbjct: 163 RISDVDEE-LSNLTNLTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCE 221
Query: 120 HLKSLFLGGN 129
L SL L N
Sbjct: 222 QLSSLDLQHN 231
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 54/186 (29%)
Query: 4 HLKTLDLSHNKLV--SDSLPLFIDMRSLTELNLSYNQLTMLPV----CTDCK-------- 49
L +LDL HN+L+ DSL ++R L+ L L YN+L +P C D +
Sbjct: 222 QLSSLDLQHNELLDLPDSLG---NLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNN 278
Query: 50 -------------NLTHLLLGFNKIN----------------NMENDY--------FLTL 72
NLT L L N N NME+++ F
Sbjct: 279 ISSLPEGLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINMEHNHITKIPFGIFTRA 338
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
L+ LN+K N+++ + +VG +++ L+L N+L+ +P ++ +L L+ L L N +K
Sbjct: 339 KYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLK 398
Query: 133 TVRNDI 138
+ I
Sbjct: 399 KLPRGI 404
>gi|194768228|ref|XP_001966215.1| GF19554 [Drosophila ananassae]
gi|190623100|gb|EDV38624.1| GF19554 [Drosophila ananassae]
Length = 375
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ + L +L LG NKI+ + D + + L +L+L N IS
Sbjct: 129 TLKELNLSGNQLTHFPEQVTELRQLKYLYLGGNKISTVSKDIW-KMQSLHVLSLGGNLIS 187
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV +VG L L L L DN + +P ++ L +LKSL L N ++ + DI+
Sbjct: 188 EVPESVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIV 240
>gi|116487781|gb|AAI25840.1| Si:ch211-197i12.3 protein [Danio rerio]
Length = 277
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 124 LSGLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFN 181
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 182 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 240
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 241 QITNLDLQHN 250
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + +LP + LT L L NK+ ++ + L+ L L L N ++ +
Sbjct: 84 LDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVG-CLSGLVTLALSENSLTSLPD 142
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + + L +L+L N I TV DI SK + I+
Sbjct: 143 SLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIR 202
Query: 151 TSRL 154
+++
Sbjct: 203 ENKI 206
>gi|456966737|gb|EMG08255.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 193
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 62 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 120
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 121 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 174
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + + +D+ +GGG
Sbjct: 175 RIRTLLPKCEIDF-----EGGG 191
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 34 LSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
L+ NQLT LP +NL L LG N+ + L L L LNL N++ E V
Sbjct: 2 LTGNQLTSLPKEIEQLRNLKTLNLGENRFQIFPVE-ILELKNLLELNLYYNQLVEFPKEV 60
Query: 93 GDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
G L +L L L N++T +P E++ L L+ L L GN I + +ILQ
Sbjct: 61 GQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 108
>gi|359728992|ref|ZP_09267688.1| hypothetical protein Lwei2_19599 [Leptospira weilii str.
2006001855]
Length = 189
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +++L S LP I +++L ELNL NQL LP+ +NL L LG N
Sbjct: 62 LQTLEWLNLGYSELTS--LPKEIGQLQNLQELNLWANQLASLPMEIGQLQNLQTLDLGDN 119
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ L L LNL N++S + +G L NL ILDL DN LT +P E+ L
Sbjct: 120 QLTSIPKKIG-QLQNLQRLNLGGNQLSSLPMEIGQLQNLQILDLGDNRLTSLPKEIGQLK 178
Query: 120 HLKSLFLG 127
+L+ L LG
Sbjct: 179 NLQELNLG 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 26/139 (18%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
S ++ L L+H L S LP I +++L LNL Y++LT LP +I
Sbjct: 40 SKVRVLGLAHQPLTS--LPKEIRQLQTLEWLNLGYSELTSLP---------------KEI 82
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++N L LNL N+++ + +G L NL LDL DN+LT +P ++ L +L
Sbjct: 83 GQLQN--------LQELNLWANQLASLPMEIGQLQNLQTLDLGDNQLTSIPKKIGQLQNL 134
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L LGGN + ++ +I Q
Sbjct: 135 QRLNLGGNQLSSLPMEIGQ 153
>gi|289741781|gb|ADD19638.1| leucine-rich repeat protein [Glossina morsitans morsitans]
Length = 361
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR----SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L TL +N+L ++SLP ++ SL ELNLS N LT P T+ KNL +L +G N
Sbjct: 94 LITLVAKNNQLTNESLPKSFIIKNQNSSLKELNLSGNMLTHFPEQVTELKNLRYLYVGGN 153
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+++ D + + L +L++ N +++V +VG L L L L DN + ++P ++ L
Sbjct: 154 QISSISKDIW-RMQSLQVLSVGGNLLTDVPDSVGLLSQLQALVLCDNLIENLPTSIARLK 212
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+LKSL L N +K + DI+
Sbjct: 213 NLKSLLLHKNRLKHLPKDIV 232
>gi|332018302|gb|EGI58907.1| Leucine-rich repeat-containing protein 58 [Acromyrmex echinatior]
Length = 348
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 12 HNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYF 69
HN L +D L F ++ +L ELNLS N+LT P D L +L LG N+I+ + D +
Sbjct: 95 HNNLTNDGLAKDFENLVNLRELNLSGNRLTEFPNQIFDLSGLKYLYLGGNRISEITKDIW 154
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L L +L++ NN+++EV +G L L L L DN L +P +++L +LK+L L N
Sbjct: 155 -KLQGLRVLSMGNNRLTEVPCTLGQLKTLQALVLCDNMLESLPSSIANLTNLKTLSLHKN 213
Query: 130 PIKTVRNDIL 139
++T+ +I+
Sbjct: 214 RLRTLPTEII 223
>gi|254410122|ref|ZP_05023902.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183158|gb|EDX78142.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 297
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L L+LS N+L V +S+ ++ LTELNL NQLT +P T NLT L L
Sbjct: 157 LVNLTELNLSDNQLTQVPESITQLVN---LTELNLFGNQLTQVPESITQLVNLTELNLFG 213
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L+ L L N++++V ++ L+NL LDLS N+LT VP +S L
Sbjct: 214 NQLTQVP-ESITQLVNLTQLYLFGNQLTQVPESISQLVNLTQLDLSHNQLTQVPESISQL 272
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L L L GN + V I Q
Sbjct: 273 VNLTELDLSGNQLTQVPESISQ 294
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L L+L N+L V +S+ ++ LTELNL NQLT +P T NLT L L
Sbjct: 180 LVNLTELNLFGNQLTQVPESITQLVN---LTELNLFGNQLTQVPESITQLVNLTQLYLFG 236
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L+ L+L +N++++V ++ L+NL LDLS N+LT VP +S L
Sbjct: 237 NQLTQVP-ESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQVPESISQL 295
Query: 119 FH 120
+
Sbjct: 296 VN 297
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P ++ +L +L++S N +P V T ++L L L I+ + + L L+ LN
Sbjct: 83 PELSNLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIP-ESISQLVNLTELN 141
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L N++++V ++ L+NL L+LSDN+LT VP ++ L +L L L GN + V I
Sbjct: 142 LSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNLTELNLFGNQLTQVPESIT 201
Query: 140 Q 140
Q
Sbjct: 202 Q 202
>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 433
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HL+ L LS NK+ LP I +++ L L L N+LT LP +NL L L N
Sbjct: 259 LQHLQKLYLSSNKITI--LPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHN 316
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ N+ + L L L+L NNK++ + +G+L NL LDL++N+LT +P E+ +L
Sbjct: 317 NLANIPKE-IGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQ 375
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+SL L NP+ + +I + + H+K RL+
Sbjct: 376 SLESLDLSDNPLTSFPEEIGK-----LQHLKWLRLE 406
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
++SL EL L NQLT +P + L L L FN++ + + L L ++ NN+
Sbjct: 167 LQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKE-IEQLQNLQEMDSNNNQ 225
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + +G+L +L L LS N++T +P E+ +L HL+ L+L N I + +I
Sbjct: 226 LKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEI 279
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P F ++ L L+LS+NQLT +P +NL + N
Sbjct: 167 LQSLQELILGKNQLTT--IPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +NKI+ + +G+L +L L LS N++T +P E+ +L
Sbjct: 225 QLKTLPKE-IGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 283
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + T+ +I Q
Sbjct: 284 KLEYLYLEVNKLTTLPKEIGQ 304
>gi|157109146|ref|XP_001650545.1| internalin A, putative [Aedes aegypti]
gi|108879119|gb|EAT43344.1| AAEL005221-PA [Aedes aegypti]
Length = 357
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L TL +N L SLP + L ELNLS N+ T P T+ ++L +L LG N
Sbjct: 92 QLTTLIAKNNLLDDKSLPKTLRSAHGGGLKELNLSGNRFTHFPEQVTELRSLKYLYLGGN 151
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ D + L L LL+L N I+E+ VG L NL L L DN + +P ++ L
Sbjct: 152 QLTNVSKDIW-KLHNLQLLSLGGNFITEIPDTVGLLNNLHALVLCDNLIEALPSSIARLV 210
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
HLKSL L N +K + +I+
Sbjct: 211 HLKSLLLHKNRLKHLPREII 230
>gi|327274240|ref|XP_003221886.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Anolis carolinensis]
Length = 522
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNDLQALEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ LI+L L L N++T V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVNSLDWI 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L+ + L GN I+ + + + + H+++ +LD
Sbjct: 256 WKLEKMDLSGNEIEYMEPHVFES----VPHLQSLQLD 288
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS N++T LP T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ +E D F L KL+ L++++N I V + D +L LD+ N+L + +
Sbjct: 148 DLQALEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
LF L L L N + V L R+IS
Sbjct: 208 LFKLTELHLEHNDLVKVN---LAHFPRLIS 234
>gi|126570324|gb|ABO21140.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 222
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDL L + S F + LT LNL YNQL LP V + L L LG N++ ++
Sbjct: 38 LDLQSTGLATLSDTAFRGLTKLTWLNLEYNQLQTLPPGVFDQLRELKDLYLGRNQLKSLP 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL++L L++N++ + D L NL L+L +NEL VP L L++
Sbjct: 98 PRVFDSLTKLTILELQSNQLQSIPKGAFDKLTNLQTLELRNNELQSVPHGAFDRLGKLQT 157
Query: 124 LFLGGNPIKTVRNDILQDSKRIISH---IKTSRLDYHCQNVDG 163
+ L N R +IL S+ I + +K+ ++ + ++ DG
Sbjct: 158 ITLYSNQFDCSRCEILYLSQWIRDNSDKVKSGNVNNYYEDPDG 200
>gi|78100662|gb|ABB21152.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 323
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+L +NKL S F +++LT L+LSYN+L LP V L L L N++ ++
Sbjct: 64 LELDYNKLSSLPHTAFHGLQTLTYLSLSYNELQTLPAGVFDQLVELDRLELSQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHLKS 123
F +LTKL+ LNL+ NK+ + V D L L L L +N+L VP + L L+
Sbjct: 124 PKIFDSLTKLTWLNLERNKLQSLPHGVFDKLTLLEKLYLDNNQLRSVPDKAFDKLSKLEK 183
Query: 124 LFLGGNPIKTVRNDIL------QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
+FL GNP DIL ++ K +S+I+ + DGG + E T E
Sbjct: 184 IFLTGNPWDCSCRDILYLSNWIREKKGTVSNIEAAE-------CDGGTKAVLEITEE 233
>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
Length = 571
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 134 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYGLDSLTTLYLRFN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +GDL NL LD++ N+L +P E+ +
Sbjct: 192 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCT 250
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 251 QITNLDLQHN 260
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N+
Sbjct: 343 FSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 402
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L
Sbjct: 403 LTKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKD 461
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ I
Sbjct: 462 LQKLVLTNNQLTTLPRGI 479
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 370 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 427
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 428 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 486
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 487 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 546
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 547 AQIVAGGPS 555
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 315 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 374
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 375 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 429
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 65 ENDYFLTLTKLSL----LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
EN L L+K S+ ++K NK+ + + VG L+NL L LS+N LT +P L +L
Sbjct: 100 ENSMRLDLSKRSIHILPSSIKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKK 159
Query: 121 LKSLFLGGNPIKTV 134
L+ L L N ++ +
Sbjct: 160 LRMLDLRHNKLREI 173
>gi|157676767|emb|CAP08018.1| unnamed protein product [Danio rerio]
Length = 429
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 29/185 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L S LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAIL----------------- 101
++ ++ + F L KL+ L+L++N++ +V+ ++ LI+L L
Sbjct: 198 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVNTLEWT 257
Query: 102 -------DLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
D S+NE+ + P S+ L +L L N + + IL DS +S I S
Sbjct: 258 WDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRIL-DSWTSLSSITLSG 316
Query: 154 LDYHC 158
D+ C
Sbjct: 317 NDWEC 321
>gi|410929637|ref|XP_003978206.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Takifugu rubripes]
Length = 523
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 5/160 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L + LF+ +R L L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQALEADLFLGLRKLKNLHLRYNALKFVPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL L+L++N++ +V+ ++ LI+L L + +N T + L
Sbjct: 198 QLQSLARNSFAGLFKLIELHLEHNELVKVNLAHFPRLISLRTLYMHNNRATIIVNTLEWT 257
Query: 119 FH-LKSLFLGGNPIKTVRNDILQDSKRI-ISHIKTSRLDY 156
+H L+ + + N I + + + + + + + ++RL Y
Sbjct: 258 WHFLEKIDVSANEIVYIEPHVFESAPNLKVLMLDSNRLTY 297
>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 738
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +++L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN +KT+ +I Q K
Sbjct: 233 NLQELDLNGNQLKTLPKEIGQLQK 256
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 208 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIE 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 567 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 624
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 625 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 684 HNLTELYLQYNRIKTLPEEI 703
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 309 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 367 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 472
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ L L N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQKLYLFDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 IN---------------NMENDYFLT-------LTKLSLLNLKNNKISEVSSNVGDLINL 98
+ N++++ T L L LNL+ N+++ + +G L NL
Sbjct: 129 LITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNL 188
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L+L DN+L +P E+ L +L++L L N + T +I Q
Sbjct: 189 QTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQ 230
>gi|260819519|ref|XP_002605084.1| hypothetical protein BRAFLDRAFT_124143 [Branchiostoma floridae]
gi|229290414|gb|EEN61094.1| hypothetical protein BRAFLDRAFT_124143 [Branchiostoma floridae]
Length = 1253
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGF 58
L HL+TL L++N L+ L M +L L+L Q T + T + NLT + L +
Sbjct: 174 LVHLQTLILNNNPLLHAQLRQLPSMTALQTLHLRNTQRTSSNIPTALETLVNLTDVDLAY 233
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + + TL+ L LNL NN ISE+S + N+ +L++S N+L +P LS L
Sbjct: 234 NELSRVPEALY-TLSSLKRLNLSNNCISELSLLIDTWTNVEVLNVSCNKLKSLPASLSKL 292
Query: 119 FHLKSLFLGGNPI 131
LK L++ N +
Sbjct: 293 VSLKRLYINVNQL 305
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL--TMLP-VCTDCKNLTHLLLGF 58
L L+ + ++HNKLVS + +L +N YNQL T +P + + L+ L
Sbjct: 55 LKKLEHIHVAHNKLVSLHGAELAALPNLRAVNARYNQLRNTGIPGEIFENEELSVLDFSH 114
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPCELSS 117
N++ M L +LNL NN+I +S+ + +L +L LDLS+N+L +P ++
Sbjct: 115 NELK-MTPSELENAKGLLVLNLSNNRIDNISNQLFINLTDLLFLDLSNNKLESLPPQMRR 173
Query: 118 LFHLKSLFLGGNPI 131
L HL++L L NP+
Sbjct: 174 LVHLQTLILNNNPL 187
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ ++ +N+L + +P I + L+ L+ S+N+L M P + K L L L N
Sbjct: 79 LPNLRAVNARYNQLRNTGIPGEIFENEELSVLDFSHNELKMTPSELENAKGLLVLNLSNN 138
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC-ELSSL 118
+I+N+ N F+ LT L L+L NNK+ + + L++L L L++N L +L S+
Sbjct: 139 RIDNISNQLFINLTDLLFLDLSNNKLESLPPQMRRLVHLQTLILNNNPLLHAQLRQLPSM 198
Query: 119 FHLKSLFL 126
L++L L
Sbjct: 199 TALQTLHL 206
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L ++ +DLS N P + DM SL L L+ + LP D K L H+ +
Sbjct: 6 VLPFVRGVDLSRNDFSECHFPKHVQDMASLCWLLLNKTGIDKLPEELADLKKLEHIHVAH 65
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NK+ ++ L L +N + N++ + + + + L++LD S NEL P EL
Sbjct: 66 NKLVSLHGAELAALPNLRAVNARYNQLRNTGIPGEIFENEELSVLDFSHNELKMTPSELE 125
Query: 117 SLFHLKSLFLGGNPIKTVRNDIL 139
+ L L L N I + N +
Sbjct: 126 NAKGLLVLNLSNNRIDNISNQLF 148
>gi|195392770|ref|XP_002055027.1| GJ19149 [Drosophila virilis]
gi|194149537|gb|EDW65228.1| GJ19149 [Drosophila virilis]
Length = 1219
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LTCLRSLDLRHNQLKNSGIPPELF-QLEELTTLDLSHNRLKEVPEGLERAKNLIVLNLSS 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++ F+ LT L L+L +N++ + L NL LDLS N P EL L
Sbjct: 133 NQIESIPTALFIHLTDLLFLDLSHNRLETLPPQTRRLTNLKTLDLSGN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNK 60
L++LKTLDLS N L LF +R L L L P D NL L L N
Sbjct: 169 LTNLKTLDLSGN-----PLELF-QLRQLPSLQSLERTLLNFPTSIDSLANLVELDLSHNA 222
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + D + L LNL +N+I+E+SS++ L L LS N+LT +P L L
Sbjct: 223 LPKLP-DCVYNVVTLVRLNLSDNEINELSSSMDQWQRLESLILSRNQLTVLPAALCKLSR 281
Query: 121 LKSLFLGGNPI 131
L+ LF+ N +
Sbjct: 282 LRRLFVNDNKL 292
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTE---LNLSYNQLTMLPV-CTDCKNLTHLLL 56
+L ++ +D + N S + P MR ++ L L + QL +P + L HL L
Sbjct: 3 VLPFVRGVDFTKNDF-SKTFP--SSMRQMSRVQWLTLDHTQLQQIPEELGHLQKLEHLSL 59
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCE 114
N + + + LT L L+L++N++ S + + L L LDLS N L +VP
Sbjct: 60 NHNHLEKLFGE-LTELTCLRSLDLRHNQLKNSGIPPELFQLEELTTLDLSHNRLKEVPEG 118
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L +L L L N I+++
Sbjct: 119 LERAKNLIVLNLSSNQIESI 138
>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 264
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+TLDLS N+L + S + + +++L L+L NQLT LP +NL L LG+N+
Sbjct: 116 LKNLQTLDLSSNQLKTLSKEI-VQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQ 174
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L +L LDL +N+L +P E+ L +
Sbjct: 175 LTALPKEIG-QLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQLKN 233
Query: 121 LKSLFLGGNPI 131
L++L+L N +
Sbjct: 234 LQTLYLNNNQL 244
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+TLDLS N+L + S + + +++L L+L Y+QLT LP KNL L L +N+
Sbjct: 24 LKNLQTLDLSSNQLKTLSKEI-VQLKNLQTLHLGYSQLTTLPKEIKQLKNLQTLDLYYNQ 82
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L N+++ + +G L NL LDLS N+L + E+ L +
Sbjct: 83 LTTLPKE-IEQLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSNQLKTLSKEIVQLKN 141
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L LG N + T+ +I Q
Sbjct: 142 LQTLHLGNNQLTTLPKEIEQ 161
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL +N+L + LP I+ +++L L L YN+LT+LP KNL L L N
Sbjct: 70 LKNLQTLDLYYNQLTT--LPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSN 127
Query: 60 KINNME---------------NDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
++ + N+ TL K L L L N+++ + +G L N
Sbjct: 128 QLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKN 187
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L+L +N+LT +P E+ L LKSL LG N +K + +I Q
Sbjct: 188 LQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQ 230
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
M++L L L YNQ+ +P KNL L L N++ + + + L L L+L ++
Sbjct: 1 MKNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKE-IVQLKNLQTLHLGYSQ 59
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ + + L NL LDL N+LT +P E+ L +L++L LG N + + +I Q
Sbjct: 60 LTTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQ 115
>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 738
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +++L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN +KT+ +I Q K
Sbjct: 233 NLQELDLNGNQLKTLPKEIGQLQK 256
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 208 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIE 376
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 567 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 624
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 625 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IK + +I
Sbjct: 684 HNLTELYLQYNRIKMLPEEI 703
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLGDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 IN---------------NMENDYFLT-------LTKLSLLNLKNNKISEVSSNVGDLINL 98
+ N++++ T L L LNL+ N+++ + +G L NL
Sbjct: 129 LITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNL 188
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L+L DN+L +P E+ L +L++L L N + T +I Q
Sbjct: 189 QTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQ 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 309 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 367 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 425
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 426 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 472
>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 394
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 31/155 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ L L+ N+L + LP I +++ L EL L +NQLT LP +
Sbjct: 243 LQNLQGLALTRNQLTT--LPKEIGNLQKLQELRLDHNQLTTLP---------------KE 285
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I N++N L LNL++N+++ + +G+L NL L+LS N+LT +P E+ +L
Sbjct: 286 IGNLQN--------LKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQS 337
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+SL L GNP+ + +I + + H+K RL+
Sbjct: 338 LESLDLSGNPLTSFPEEIGK-----LQHLKRLRLE 367
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGF 58
+ ++ L L+ KL++ LP I ++++L ELNL NQLT +P + NL HL LGF
Sbjct: 37 TQVRVLYLNAKKLIA--LPKEIGNLQNLQELNLWENQLTTIP--QEIGNLQHLQKLDLGF 92
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NKI + N+ L L LNL N+++ + + +L +L L L N+LT +P E+ L
Sbjct: 93 NKITVLPNEIG-KLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKL 151
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
+L+ L L N + T+ +I LQ+ K +
Sbjct: 152 QNLQELHLWENQLTTIPQEIGNLQNLKEL 180
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 39/207 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L HL+ LDL NK+ LP I ++SL ELNLS+NQLT +P + L HL
Sbjct: 82 LQHLQKLDLGFNKITV--LPNEIGKLQSLQELNLSFNQLTTIP--KEIWELQHL------ 131
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L+L N+++ + +G L NL L L +N+LT +P E+ +L +
Sbjct: 132 ---------------QTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQN 176
Query: 121 LKSLFLGGNPIKTVRNDI--LQDSKRII---SHIKTSRLDY-HCQNVDGGGMSSQESTS- 173
LK L+L N + T+ ++ LQ+ +++I + + T + QN+ G ++ + T+
Sbjct: 177 LKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTL 236
Query: 174 --EI----NIDKYKLDRTKTLTLCKVI 194
EI N+ L R + TL K I
Sbjct: 237 PKEIGNLQNLQGLALTRNQLTTLPKEI 263
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
N+ T++ +L L K+ + +G+L NL L+L +N+LT +P E+ +L HL+ L
Sbjct: 30 NEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLD 89
Query: 126 LGGNPIKTVRNDI 138
LG N I + N+I
Sbjct: 90 LGFNKITVLPNEI 102
>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ SLP I ++++L EL+LS NQLT LPV + KNL L L N
Sbjct: 64 LRNLKELNLGRNQI--SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + D+ L L +L L NK + + L NL LD S+N+L ++P +L L
Sbjct: 122 RISVLPKDFSLP-QNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQ 180
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L GN +K +
Sbjct: 181 NLNILYLLGNELKVL 195
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 23 FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
F + RSL LNL+YN+ + P K L L L N+ + + L L+ L L+
Sbjct: 199 FSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIG-NLDNLNSLFLE 257
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
N++ ++ +G L NL L L +N+LT +P E+ SL +LK L+L G
Sbjct: 258 ANRLRQLPKGIGKLQNLERLYLQENQLTTLPEEIGSLSNLKGLYLQG 304
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL N+IS + +G+L NL LDLSDN+LT +P E+ +L +L+ L L N I
Sbjct: 64 LRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRI 123
Query: 132 KTVRNDI 138
+ D
Sbjct: 124 SVLPKDF 130
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLL 56
L +L+ LD S N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 155 QLQNLEWLDFSENQL--KELP--EKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 210
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+N+ + ++L KL L L N+ + + +G+L NL L L N L +P +
Sbjct: 211 NYNRFQVFPKE-LISLKKLETLELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIG 269
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
L +L+ L+L N + T+ +I
Sbjct: 270 KLQNLERLYLQENQLTTLPEEI 291
>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 558
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L +N+L + LP I +R L L L+ NQL LP +NL L L +N
Sbjct: 383 LERLEWLNLYNNRLAT--LPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLEYN 440
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL +L L+LKNN+++ + +G L + L+L++N+L +P E+ L
Sbjct: 441 QLATLP-EAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQLQ 499
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+LK L L GNP T +I+
Sbjct: 500 NLKDLDLSGNPFTTFPQEIV 519
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I + +L +LN+ NQL LP +NL L L N
Sbjct: 199 LQNLKYLRLAYNQLTT--LPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENN 256
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L L L L++N+L +P E+ L
Sbjct: 257 RLITLPKEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQ 315
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+LK L L N +++ +I +S+++ L+Y+
Sbjct: 316 NLKELILENNRLESFPKEI-----GTLSNLQRLHLEYN 348
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L LK L LS N+L + LP I ++ L L L NQLT +P ++L L L N
Sbjct: 84 LQKLKWLYLSENQLAT--LPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LNL NN++ + +G L +L L++ +N+L +P E+ +L
Sbjct: 142 QLITLPQEIG-TLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQ 200
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + T+ +I
Sbjct: 201 NLKYLRLAYNQLTTLPKEI 219
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 32 LNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN 91
L+L+ NQLT+LP +I ++N + L L +NN+++ +
Sbjct: 44 LDLTRNQLTVLP---------------QEIGKLQNLFSLYL--------ENNQLTTLPQE 80
Query: 92 VGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
+ L L L LS+N+L +P E+ L L+ L+LGGN + T+ +I LQD
Sbjct: 81 IETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQD 132
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L EL+L NQL LP ++L L L N
Sbjct: 107 LQRLERLYLGGNQLTT--IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LN+ NN++ + +G L NL L L+ N+LT +P E+ L
Sbjct: 165 QLRTLPKEIG-TLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLE 223
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L + N + T+ +I
Sbjct: 224 NLQDLNVFNNQLITLPQEI 242
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+L+L N+++ + +G L NL L L +N+LT +P E+ +L LK L+L N + T+
Sbjct: 43 MLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPK 102
Query: 137 DI--LQDSKRI 145
+I LQ +R+
Sbjct: 103 EIGKLQRLERL 113
>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 400
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP I +++L EL L+ NQL LP KNL L L N
Sbjct: 114 LKNLQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYAN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ +S+ +G L NL +LDL+DN+L +P E+ L
Sbjct: 172 QLKTLPKEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N KTV +I Q
Sbjct: 231 NLQMLDLNNNQFKTVPEEIGQ 251
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L +LP I +++L EL+LSYNQL L +NL L L N
Sbjct: 160 LKNLQQLNLYANQL--KTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+ V +G L NL +LDL N+ VP E+ L
Sbjct: 218 QLKTLPKEIG-QLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLK 276
Query: 120 HLKSLFLGGNPIKTV 134
+L+ LFL N KTV
Sbjct: 277 NLQMLFLNNNQFKTV 291
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L +LP I +++L +LNL NQL LP +NL L L +N
Sbjct: 137 LKNLRELYLNTNQL--KTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L +N++ + +G L NL +LDL++N+ VP E+ L
Sbjct: 195 QLKTLSAEIG-QLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLK 253
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N KTV +I Q
Sbjct: 254 NLQVLDLGYNQFKTVPEEIGQ 274
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L +LP I +++L L+L+ NQ +P KNL L LG+N
Sbjct: 206 LQNLQVLDLNDNQL--KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L +L L NN+ V G L NL +L L+ N+LT +P E+ L
Sbjct: 264 QFKTVPEEIG-QLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 323 NLRELHLSYNQLKTLSAEIGQ 343
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L L L+ NQL LP +I
Sbjct: 48 VRVLDLSEQKL--KTLPKEIGQLQNLQVLELNNNQLATLP---------------KEIGQ 90
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L L+L N+++ +G L NL L LS N LT +P E+ L +L+
Sbjct: 91 LQN--------LQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRE 142
Query: 124 LFLGGNPIKTVRNDILQ 140
L+L N +KT+ +I Q
Sbjct: 143 LYLNTNQLKTLPKEIGQ 159
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I +++L L L+ NQ +P T KNL L L N
Sbjct: 252 LKNLQVLDLGYNQF--KTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNAN 309
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
++ + N+ L L L+L N++ +S+ +G L NL L L DN+LT +P E+
Sbjct: 310 QLTTLPNE-IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364
>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
3]
gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
3]
Length = 925
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGF 58
L+ L +L L N+L LP I + LTEL+LS NQLT+LP N LT L L
Sbjct: 85 QLTQLTSLSLHDNQLAV--LPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHT 142
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + LT+L+ L+L NN+++++ ++G L L LDL +N+LTD+P + L
Sbjct: 143 NQLTVLP-ESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQL 201
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L L L N + T+ I Q
Sbjct: 202 TQLTELDLRNNELTTLPESIGQ 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L+ L LDLS N+L LP I + LT L+L NQLT+LP LT L L
Sbjct: 108 QLTQLTELDLSTNQLTV--LPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSN 165
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LT+L+ L+L NN+++++ ++G L L LDL +NELT +P + L
Sbjct: 166 NQLTDLP-ESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESIGQL 224
Query: 119 FHLKSLFLGGN 129
L+ L L N
Sbjct: 225 TQLRELSLHTN 235
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L+ L LDL N+L LP I + LT L+LS NQLT LP LT L L
Sbjct: 131 QLNQLTRLDLHTNQLTV--LPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPN 188
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
N++ ++ + LT+L+ L+L+NN+++ + ++G L L L L NELT +P
Sbjct: 189 NQLTDLP-ESIGQLTQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLP 241
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
SLP I + LT L L NQLT+LP LT L L N++ + + LT+L+
Sbjct: 32 SLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLP-ESISQLTQLT 90
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L+L +N+++ + ++ L L LDLS N+LT +P + L L L L N + +
Sbjct: 91 SLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPE 150
Query: 137 DILQ 140
I Q
Sbjct: 151 SIGQ 154
>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
Length = 470
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L +LK LDL HN L S LP F D+ L +L+L N LT +P K + L L N
Sbjct: 273 LKNLKDLDLMHNDLTS--LPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSN 330
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ ++ L+ L L L N+ + + + L NL L +DN++T++P E+ L
Sbjct: 331 QLSSLPPEFGNHLS-LGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLK 389
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+SL L GNPIK + +I Q
Sbjct: 390 KLRSLDLIGNPIKQLPPEISQ 410
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-----------VCTDCKN 50
LS LK LDLS NKL+ P F + SL LNLS N L LP + D +
Sbjct: 112 LSQLKELDLSENKLMRLD-PEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNS 170
Query: 51 LTHLLLGFNKINNMEN------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
+ L F K++ + + D L KL L N+I E+ +G+L NL
Sbjct: 171 IASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLENL 230
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
LDL +N++ +P E+ +L +LK L L N + ++ +I
Sbjct: 231 ETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEI 270
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
ML +L+ L+L N + S P+F + L L+++ N++ T+ K L +L N
Sbjct: 157 MLENLRDLNLDSNSIASLP-PVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L L L+L+ N+I + S +G+L NL LDL N LT +P E+ L
Sbjct: 216 RIKELP-PQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLK 274
Query: 120 HLKSL 124
+LK L
Sbjct: 275 NLKDL 279
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
F T TK++ LN+ +N +SE+S +G+L NL L++SDN + +P E+ +L LK L L
Sbjct: 63 FPTDTKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSE 122
Query: 129 N 129
N
Sbjct: 123 N 123
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 25/121 (20%)
Query: 15 LVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLT 73
L DSL LF +T LN+S N L+ L P + KNLT
Sbjct: 55 LSDDSLHLFPTDTKVTWLNISDNSLSELSPEIGNLKNLT--------------------- 93
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
LN+ +N I + +G+L L LDLS+N+L + E L L+ L L N +KT
Sbjct: 94 ---WLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKT 150
Query: 134 V 134
+
Sbjct: 151 L 151
>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 299
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 85 LQNLQSLDLSTNRLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 143 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 201
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 202 NLQVLDLGSNQLTTLPEGIGQ 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+LP I ++ L L L NQLT LP KNL L L +N+I + + L KL
Sbjct: 8 TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKLQKLQ 66
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L L NN+++ + +G L NL LDLS N LT +P E+ L +L+SL L N + T+
Sbjct: 67 SLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ 126
Query: 137 DI 138
+I
Sbjct: 127 EI 128
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+TL+L +N+L + S + +++L L+L NQLT+ P KNL L LG N+
Sbjct: 154 LKNLQTLNLRNNRLTTLSKEIE-QLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 212
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L +N+++ + + L NL +LDLS N+L +P E+ L +
Sbjct: 213 LTTLP-EGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKN 271
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L+LG N + + +I Q
Sbjct: 272 LQTLYLGYNQLTVLPKEIGQ 291
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L EL L NQLT+LP KNL L L N
Sbjct: 108 LQNLQSLDLSTNRLTT--LPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNN 165
Query: 60 K-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I ++N L L L +L+L +N+++ + +G L N
Sbjct: 166 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKN 225
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L LDL N+LT +P E+ L +L+ L L N +KT+ +I Q + +++T L Y+
Sbjct: 226 LQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQ-----LKNLQTLYLGYN 280
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ NN+++ + +G L L L L N+LT +P E+ L +LKSL L N IKT+ +I
Sbjct: 1 MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 59
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 37 NQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
NQLT LP + L L L N++ + + L L LNL N+I + + L
Sbjct: 4 NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEIEKL 62
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L L +N+LT +P E+ L +L+SL L N + T+ +I Q
Sbjct: 63 QKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQ 107
>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
Length = 925
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+LT+L+L NQ+T +P NL L L N+I+ + + LT L LL L +N+I+
Sbjct: 132 NLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEE-IAQLTNLRLLYLSDNQIT 190
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
E+ + L NL L LSDN++T++P ++ L +L+ L LGGN I +
Sbjct: 191 EIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEI 238
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L++L LDL +N++ +P I + +L EL LS NQ++ +P NL L L
Sbjct: 129 QLTNLTQLDLYNNQITE--IPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSD 186
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L+ L L +N+I+E+ + L NL LDL N++T++P L L
Sbjct: 187 NQITEIP-EAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEALVKL 245
Query: 119 FHLKSLFLGGNPIKTVRNDIL--QDSKRIISHIKTSR 153
+L+ L L N I + +IL +++K+I+++++ R
Sbjct: 246 TNLRQLDLSNNQITEIPLEILDSKETKKILNYLRQIR 282
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 12 HNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFL 70
HN +++ + ++ +L +LNLSYNQ++ +P T NL L L N+++ + +
Sbjct: 47 HNNKITEIPQVIANLTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEE-IA 105
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
LT L LL+L NN+ISE+ + L NL LDL +N++T++P ++ L +L+ L+L N
Sbjct: 106 QLTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQ 165
Query: 131 IKTVRNDILQ 140
I + +I Q
Sbjct: 166 ISEIPEEIAQ 175
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L+ L LS+N+ VS+ + +L L+L+ NQ++ +P NLT L L N
Sbjct: 83 QLTNLRLLSLSNNQ-VSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLYNN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L L L NN+ISE+ + L NL +L LSDN++T++P ++ L
Sbjct: 142 QITEIP-EAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSDNQITEIPEAITQLT 200
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L L+L N I + I Q
Sbjct: 201 NLTDLYLSDNQITEIPEAITQ 221
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L+ L LS+N+ +S+ + +L L LS NQ+T +P T NLT L L N
Sbjct: 152 QLTNLRELYLSNNQ-ISEIPEEIAQLTNLRLLYLSDNQITEIPEAITQLTNLTDLYLSDN 210
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L L+L N+I+E+ + L NL LDLS+N++T++P E+
Sbjct: 211 QITEIP-EAITQLTNLRQLDLGGNQITEIPEALVKLTNLRQLDLSNNQITEIPLEILDSK 269
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
K + I+T + L ++K
Sbjct: 270 ETKKILNYLRQIRTSKTRPLHEAK 293
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 34 LSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
++ ++L L K L L NK+ + + LT L+ L L NNKI+E+ +
Sbjct: 1 MTQDELLALIEQAAAKGWRELDLSGNKLTKIP-EAIAKLTNLTGLYLHNNKITEIPQVIA 59
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L NL L+LS N+++++P ++ L +L+ L L N + + +I Q
Sbjct: 60 NLTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQ 106
>gi|24641036|ref|NP_727428.1| CG32687, isoform A [Drosophila melanogaster]
gi|442615803|ref|NP_001259412.1| CG32687, isoform B [Drosophila melanogaster]
gi|21064705|gb|AAM29582.1| RH29237p [Drosophila melanogaster]
gi|22832031|gb|AAF46596.2| CG32687, isoform A [Drosophila melanogaster]
gi|220960204|gb|ACL92638.1| CG32687-PA [synthetic construct]
gi|440216620|gb|AGB95255.1| CG32687, isoform B [Drosophila melanogaster]
Length = 377
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L LG NKI+++ D + + L +L+L N IS
Sbjct: 133 TLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIW-KMQSLHVLSLGGNLIS 191
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + +P ++ L +LKSL L N ++ + DI+
Sbjct: 192 EVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIV 244
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 5 LKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++T+ L+HN+LV LP L + +L L+LS N +T LP L L+ N + N
Sbjct: 49 IETMLLNHNRLVG--LPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTN 106
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
L LTK++ N N +S + +L +LS N+LT P +++ L HLK
Sbjct: 107 ASLPKSL-LTKMANGNGNGNATGGTNSTLKEL------NLSGNQLTHFPEQVTELRHLKY 159
Query: 124 LFLGGNPIKTVRNDILQ 140
L+LGGN I +V DI +
Sbjct: 160 LYLGGNKISSVSKDIWK 176
>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 358
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LKTLDL N+L + LP I ++++L L+L NQLT LP +NL L L N
Sbjct: 210 LQNLKTLDLEGNQLAT--LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L +N+++ + VG L NL L L +N LT +P E+ L
Sbjct: 268 RLTTLPKE-IEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQ 326
Query: 120 HLKSLFLGGNP 130
+LK L LGGNP
Sbjct: 327 NLKELNLGGNP 337
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++++L +LNL+ NQ T LP + + L L LG N++ + + + L L L+L+ N
Sbjct: 163 NLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIW-NLQNLKTLDLEGN 221
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+++ + +G+L NL LDL N+LT +P E+ L +LK L+L N + T+ +I
Sbjct: 222 QLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEI 276
>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ SLP I ++++L EL+LS NQLT LPV + KNL L L N
Sbjct: 64 LRNLKELNLGRNQI--SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + D+ L L +L L NK + + L NL LD S+N+L ++P +L L
Sbjct: 122 RISVLPKDFSLP-QNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQ 180
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L GN +K +
Sbjct: 181 NLNILYLLGNELKVL 195
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 23 FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
F + RSL LNL+YN+ + P K L L L N+ + + L+ L+ L L+
Sbjct: 199 FSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIG-NLSNLNSLFLE 257
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
N++ ++ N+G L NL L L +N+LT +P E+ SL +LK L+L G
Sbjct: 258 ANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQG 304
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLL 56
L +L+ LD S N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 155 QLQNLEWLDFSENQL--KELP--EKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 210
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+N+ + ++L KL L L N+ + + +G+L NL L L N L +P +
Sbjct: 211 NYNRFQVFPKE-LISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIG 269
Query: 117 SLFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L +L+SL+L N + T+ +I LQ+ K +
Sbjct: 270 KLQNLESLYLQENQLTTLPEEIGSLQNLKEL 300
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL N+IS + +G+L NL LDLSDN+LT +P E+ +L +L+ L L N I
Sbjct: 64 LRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRI 123
Query: 132 KTVRNDI 138
+ D
Sbjct: 124 SVLPKDF 130
>gi|432952603|ref|XP_004085155.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 5-like [Oryzias latipes]
Length = 389
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L++L L N + F +RSL L L N LT +P ++ L + L N
Sbjct: 147 LHNLQSLRLDANHISGVPAGSFSGLRSLRHLWLDDNALTEVPAEALSELPALQAMTLALN 206
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSL 118
I ++ + F L +L +L+L NN+I + +N L +L LDL+ N+L + P + SL
Sbjct: 207 HIRHVPDHAFSALGRLVVLHLNNNRIVSMGTNCFHGLHSLETLDLNYNQLMEFPTAIRSL 266
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
HLK LF NPI++V Q+
Sbjct: 267 RHLKELFFYDNPIQSVGRTAFQN 289
>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 469
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L + +TL LS N+L + LP I +++L EL L+ NQ T P KNL L L N
Sbjct: 183 LQNFQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYAN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L+L N++ +S+ +G L NL +LDL+DN+L +P E+ L
Sbjct: 241 QLKTLPNEIG-QLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 299
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N KTV +I Q
Sbjct: 300 NLQVLDLNNNQFKTVPEEIGQ 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L +LP I +++L L+L+ NQ +P KNL L LG+N
Sbjct: 275 LQNLQVLDLNDNQL--KTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 332
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L +L L NN++ +S+ +G L NL +L L+ N+LT +P E+ L
Sbjct: 333 QFKTVSEEIG-QLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLK 391
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 392 NLRELHLSYNQLKTLSAEIGQ 412
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L+ N+ + P I +++L +LNL NQL LP +NL L L +N
Sbjct: 206 LKNLRELYLNTNQFTA--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L +N++ + +G L NL +LDL++N+ VP E+ L
Sbjct: 264 QLKTLSAEIG-QLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N KTV +I Q
Sbjct: 323 NLQVLDLGYNQFKTVSEEIGQ 343
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L++N+L + LP I +++L L L+ NQL LP KNL L L N
Sbjct: 68 LQNLQVLELNNNQLAT--LPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L NN+++ + +G L NL L+L N+LT +P E+ L
Sbjct: 126 QLATLPKEIG-QLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+ ++L L N + T+ +I Q
Sbjct: 185 NFQTLVLSKNRLTTLPKEIGQ 205
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L L L+ NQL LP KNL L L N++
Sbjct: 48 VRVLDLSEQKL--KTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L L NN+++ + +G L NL +L+L++N+L +P E+ L +L+
Sbjct: 106 TLPKEIG-QLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQ 164
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 165 WLNLVTNQLTTLPEEIGQ 182
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ LDL +N K VS+ + +++L L L+ NQL L KNL L L
Sbjct: 321 LKNLQVLDLGYNQFKTVSEEIG---QLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNA 377
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N++ + N+ L L L+L N++ +S+ +G L NL L L DN+LT +P E+
Sbjct: 378 NQLTTLPNE-IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433
>gi|284010625|dbj|BAI66792.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 274
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L+L +NKL S F ++ LT L+L NQL LP V KNL L L N++ +
Sbjct: 43 KKLELDYNKLSSLPNTAFHNLNKLTFLDLESNQLQTLPAGVFDQLKNLETLWLSENQLQS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHL 121
+ F LTKL++L L NNK+ + V D L L IL L +N+L +P L L L
Sbjct: 103 LPGGIFDKLTKLTILYLHNNKLQSLPDGVFDKLTQLTILHLYNNKLQALPDGLFDKLTEL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
K+L+L N +++V N DS +S+IKT LD
Sbjct: 163 KTLYLRNNQLRSVPNRAF-DS---LSNIKTLWLD 192
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L LDL N+L + +F +++L L LS NQL LP + LT L L N
Sbjct: 63 LNKLTFLDLESNQLQTLPAGVFDQLKNLETLWLSENQLQSLPGGIFDKLTKLTILYLHNN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
K+ ++ + F LT+L++L+L NNK+ + + D L L L L +N+L VP S
Sbjct: 123 KLQSLPDGVFDKLTQLTILHLYNNKLQALPDGLFDKLTELKTLYLRNNQLRSVPNRAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L ++K+L+L NP NDIL SK I
Sbjct: 183 LSNIKTLWLDTNPWDCSCNDILYLSKWI 210
>gi|255078974|ref|XP_002503067.1| predicted protein [Micromonas sp. RCC299]
gi|226518333|gb|ACO64325.1| predicted protein [Micromonas sp. RCC299]
Length = 252
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+L++N+L S LP + + +L EL+L NQLT +P +LT L LG
Sbjct: 50 LTSLEMLNLNYNQLTS--LPAEVGQLTALKELSLYGNQLTSVPAEIGQLASLTELNLGGG 107
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K LT L L L +N+++ V + +G L +L L L+ N+LT VP E+ L
Sbjct: 108 KQLTSVPAEVGQLTSLERLWLHDNRLTSVPAEIGQLASLRELWLNYNQLTSVPAEIGQLR 167
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ LFL N + +V DI Q
Sbjct: 168 SLRWLFLNDNRLTSVPADIGQ 188
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L+ LK L L N+L S +P I + SLTELNL QLT +P +L L L
Sbjct: 73 LTALKELSLYGNQLTS--VPAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHD 130
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + L L L L N+++ V + +G L +L L L+DN LT VP ++ L
Sbjct: 131 NRLTSVPAEIG-QLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQL 189
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + +V +I Q
Sbjct: 190 TSLEGLWLHANQLTSVPAEIGQ 211
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L K ++ S+P + + SL L L N+LT +P +L L L +N
Sbjct: 96 LASLTELNLGGGKQLT-SVPAEVGQLTSLERLWLHDNRLTSVPAEIGQLASLRELWLNYN 154
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L L +N+++ V +++G L +L L L N+LT VP E+ L
Sbjct: 155 QLTSVPAEIG-QLRSLRWLFLNDNRLTSVPADIGQLTSLEGLWLHANQLTSVPAEIGQLT 213
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+LG N + +V I
Sbjct: 214 SLEKLYLGDNRLTSVPAAI 232
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL EL L+YNQLT +P ++L L L N
Sbjct: 120 LTSLERLWLHDNRLTS--VPAEIGQLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDN 177
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ D LT L L L N+++ V + +G L +L L L DN LT VP + L
Sbjct: 178 RLTSVPADIG-QLTSLEGLWLHANQLTSVPAEIGQLTSLEKLYLGDNRLTSVPAAIREL 235
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L+ + L+L N+++ V + +G L +L +L+L+ N+LT +P E+ L LK L L GN +
Sbjct: 27 LSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKELSLYGNQL 86
Query: 132 KTVRNDILQ 140
+V +I Q
Sbjct: 87 TSVPAEIGQ 95
>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 402
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
M++L ELNL+ NQLT+LP KNL L L N+I + + L KL L L NN+
Sbjct: 1 MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE-IEKLQKLQSLYLPNNQ 59
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ + +G L L L L N+LT +P E+ L +LKSL L N IKT+ +I
Sbjct: 60 LTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 113
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 139 LQNLQSLDLSTNRLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 197 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 256 NLQVLDLGSNQLTTLPEGIGQ 276
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 47 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 104
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 105 QIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQ 163
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+SL L N + T+ +I
Sbjct: 164 NLQSLDLSTNRLTTLPQEI 182
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+TL+L +N+L + S + +++L L+L NQLT+ P KNL L LG N+
Sbjct: 208 LKNLQTLNLRNNRLTTLSKEIE-QLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 266
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L +N+++ + + L NL +LDLS N+L +P E+ L +
Sbjct: 267 LTTLP-EGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKN 325
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L+LG N + + +I Q
Sbjct: 326 LQTLYLGYNQLTVLPKEIGQ 345
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L L+L NQLT LP KNL L L +N
Sbjct: 254 LKNLQVLDLGSNQLTT--LPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 312 QLKTLPKE-IEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 370
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 371 NLQELYLNNN 380
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++LDLS N+L + LP I +++L EL L NQLT+LP KNL L L N
Sbjct: 162 LQNLQSLDLSTNRLTT--LPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNN 219
Query: 60 K-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I ++N L L L +L+L +N+++ + +G L N
Sbjct: 220 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKN 279
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L LDL N+LT +P E+ L +L+ L L N +KT+ +I Q + +++T L Y+
Sbjct: 280 LQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQ-----LKNLQTLYLGYN 334
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L P I +++L L+L NQLT LP KNL L L N
Sbjct: 231 LQNLKSLDLRSNQLTI--FPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL+L N++ + + L NL L L N+LT +P E+ L
Sbjct: 289 QLTTLPQE-IKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK LFL N + T+ +I Q
Sbjct: 348 NLKVLFLNNNQLTTLPKEIGQ 368
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL N+L + LP I +++L L+LSYNQL LP KNL L LG+N
Sbjct: 277 LKNLQTLDLDSNQLTT--LPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L +L L NN+++ + +G L NL L L++N+L+
Sbjct: 335 QLTVLPKEIG-QLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLS 383
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N++ ++P I+ ++ L L L NQLT LP + L L L N
Sbjct: 24 LKNLRKLNLSANQI--KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKN 81
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 82 QLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 140
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+SL L N + T+ +I Q
Sbjct: 141 NLQSLDLSTNRLTTLPQEIGQ 161
>gi|194890075|ref|XP_001977229.1| GG18917 [Drosophila erecta]
gi|190648878|gb|EDV46156.1| GG18917 [Drosophila erecta]
Length = 371
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L LG NKI+ + D + + L +L+L N IS
Sbjct: 127 TLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISGVSKDIW-KMQSLHVLSLGGNLIS 185
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + +P ++ L +LKSL L N ++ + DI+
Sbjct: 186 EVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIV 238
>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 1235
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L L LS N+L ++ F + SL +LNLS N+LT +P + K+LT L L NK
Sbjct: 180 LINLMELYLSQNQL-TEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNK 238
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + LT L+ L++ N+++E+ +G L L L LS N+L +VP EL L
Sbjct: 239 LMEVPKE-LGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLAR 297
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L N + + +I + +K I I ++L
Sbjct: 298 LTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQL 331
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L LS N+L+ +P ++ + SLT+L LS NQLT P NL L L N
Sbjct: 134 LINLTELYLSQNQLMK--IPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + F LT L LNL N+++ V +G+L +L L LS N+L +VP EL L
Sbjct: 192 QLTEVPKE-FGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLT 250
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L L + N + + +I Q +K
Sbjct: 251 NLTWLHIDQNQLTEIPEEIGQLTK 274
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L L LS N+L +P I + +L L+LS NQLT +P NLT L L N
Sbjct: 42 LTNLIALSLSGNQLTE--VPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQN 99
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L+L N+++EV +G LINL L LS N+L +P +L L
Sbjct: 100 RLTEVPEE-IGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLI 158
Query: 120 HLKSLFLGGNPI 131
L L+L N +
Sbjct: 159 SLTKLYLSQNQL 170
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L LS N+L+ +P I + L L + NQLT +P + NLT L L N
Sbjct: 295 LARLTRFSLSQNQLIE--IPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQN 352
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +TKL+ L+L N++ EV +G LINL L L+ N+LT VP EL L
Sbjct: 353 QLTKIPKE-LGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPKELGKLT 411
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L N + V ++
Sbjct: 412 NLTRLHLSYNKLIEVPKEL 430
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L L+LS N+L L +++SLTEL+LS N+L +P NLT L + N+
Sbjct: 203 LTSLIKLNLSQNRLTGVPQELG-ELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQ 261
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + LTKL+ L+L +N++ EV +G L L LS N+L ++P E+ +
Sbjct: 262 LTEIPEE-IGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAK 320
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L L + N + V ++ Q
Sbjct: 321 LIWLRIDQNQLTEVPRELSQ 340
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 7 TLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
TLDL KL +P I + +L L+LS NQLT +P NL L L N++ +
Sbjct: 24 TLDLCSLKLTE--VPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEV 81
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L+ L L N+++EV +G L +L L L N+LT+VP E+ L +L L
Sbjct: 82 PKE-IGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTEL 140
Query: 125 FLGGNPIKTVRNDILQDSKRIISHIK 150
+L N + + D+ +R+IS K
Sbjct: 141 YLSQNQLMKIPKDL----ERLISLTK 162
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGF 58
L L L LS N+L L + +L EL LS NQLT +P + LT L+ L
Sbjct: 157 LISLTKLYLSQNQLTEAPKELG-KLINLMELYLSQNQLTEVP--KEFGQLTSLIKLNLSQ 213
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L+ L+L NK+ EV +G L NL L + N+LT++P E+ L
Sbjct: 214 NRLTGVPQE-LGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQL 272
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L L L N +K V ++ Q
Sbjct: 273 TKLTELSLSHNQLKEVPKELGQ 294
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L L L N+L L + LTEL+LS NQL +P NL L L N+
Sbjct: 341 LVNLTRLHLHQNQLTKIPKELG-KVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQ 399
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + LT L+ L+L NK+ EV +G L +L LDL N+LT VP EL L
Sbjct: 400 LTKVPKE-LGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKELGKLAK 458
Query: 121 LKSLFLGGNPI 131
L L L N +
Sbjct: 459 LVILDLSNNSL 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L L LS N+L +P I + +LT+L L N+LT +P +LT L L N
Sbjct: 65 LTNLIALSLSGNQLTE--VPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L L N++ ++ ++ LI+L L LS N+LT+ P EL L
Sbjct: 123 QLTEVPKE-IGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLI 181
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
+L L+L N + V + Q + I ++ +RL Q + +S +E+++ +
Sbjct: 182 NLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQE-----LGELKSLTELHLSQ 236
Query: 180 YKL 182
KL
Sbjct: 237 NKL 239
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 28 SLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+LT L+L NQLT +P LT L L N++ + + L L L L N+++
Sbjct: 343 NLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKE-LGQLINLVELRLNQNQLT 401
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRII 146
+V +G L NL L LS N+L +VP EL L L+ L L N + V ++ + +K +I
Sbjct: 402 KVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKELGKLAKLVI 461
Query: 147 SHIKTSRLD 155
+ + L+
Sbjct: 462 LDLSNNSLN 470
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L LSHN+L +P + + LT +LS NQL +P L L + N
Sbjct: 272 LTKLTELSLSHNQL--KEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQN 329
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L+ L+L N+++++ +G + L L LS N+L +VP EL L
Sbjct: 330 QLTEVPRE-LSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLI 388
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L L N + V ++ + + H+ ++L
Sbjct: 389 NLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKL 423
>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
SHOC-2-like [Cavia porcellus]
Length = 584
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +GDL NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP------VCTDC--------K 49
L L++ N+L S LPL F S+ ELNL+ NQLT +P V + K
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 50 NLTHLLLGFNKINNM---ENDY--------FLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
L H L K+ + EN + +L + + L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENXFDHCPNEIAYLKDLQXNKLVLTNNQLTTLPRGIGHLTNL 498
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYH 157
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 499 THLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHL 558
Query: 158 CQNVDGGGMS 167
+ GG S
Sbjct: 559 PPQIVAGGPS 568
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|443691966|gb|ELT93687.1| hypothetical protein CAPTEDRAFT_226336 [Capitella teleta]
Length = 1181
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
+++L L L++N + + F+D+ +L L+L +N L +P + + K L HL L N
Sbjct: 80 IAYLNRLHLNYNSFKTVPVQAFLDLHALQSLHLDHNYLQFIPPASFLNMKQLRHLWLDGN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE-LSSL 118
+ ++ L+ L LNL NN+I ++ L NL L L+ N + +P E +
Sbjct: 140 QFKDIPTQALQHLSSLEALNLDNNEIKNITDQFVHLNNLIDLSLTSNHIAHIPREAFTHC 199
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
LK +FL NP+ +V+N +
Sbjct: 200 KQLKQVFLAHNPLLSVQNQAFK 221
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLP--VCTDCKNLTHLLL 56
L L+ L LS +L D F+D+ SLT L+L + ++P +C L L L
Sbjct: 223 LPSLQRLHLSELRLQMD----FLDLNGSTSLTRLSLDRGIIRVIPGNLCNLLPKLRVLNL 278
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CE 114
G+N++ +++ F + +L L L +NK+ ++ + L+NL LDL DN + ++
Sbjct: 279 GYNELASLDGQLFSGMGRLQDLTLSHNKLRIIADDAFTGLLNLKYLDLQDNRIMEIGDLV 338
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQD 141
L + L LG N +T+ LQ+
Sbjct: 339 FEQLPRMMELNLGQNIFRTLPMRGLQN 365
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 33/135 (24%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L+L +N+L S LF M L +L LS+N+L ++
Sbjct: 269 LLPKLRVLNLGYNELASLDGQLFSGMGRLQDLTLSHNKLRII------------------ 310
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-----NLAILDLSDNELTDVPCEL 115
+D F L L L+L++N+I E +GDL+ + L+L N +P +
Sbjct: 311 ----ADDAFTGLLNLKYLDLQDNRIME----IGDLVFEQLPRMMELNLGQNIFRTLP--M 360
Query: 116 SSLFHLKSLFLGGNP 130
L ++++L + GNP
Sbjct: 361 RGLQNIRNLRVFGNP 375
>gi|417763567|ref|ZP_12411544.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417773413|ref|ZP_12421293.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418674344|ref|ZP_13235651.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409940386|gb|EKN86026.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410576802|gb|EKQ39804.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410578764|gb|EKQ46618.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 280
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L LS N+L +LP I+ ++ L L LS NQLT LP K L L L N
Sbjct: 59 LKELEWLSLSRNQL--KTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL LNL NN+++ + +G L L +LDLS+N+LT +P E+ L
Sbjct: 117 QLTTLPKE-IETLKKLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLK 175
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L+ L+L N + T+ I+
Sbjct: 176 RLQELYLKNNQLTTLPKGIV 195
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L+L +N+L + LP I ++ L L+LS NQLT LP + K L L L N
Sbjct: 128 LKKLESLNLINNQLTT--LPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNN 185
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L +L LL+L N+++ +S +G L L LDLS N+LT +P E+ +L
Sbjct: 186 QLTTLPKG-IVYLKELWLLDLSFNQLTALSKEIGYLKKLQKLDLSRNQLTTLPKEIETLK 244
Query: 120 HLKSLFLGGNPI 131
L+ LFL P+
Sbjct: 245 KLEELFLDDIPV 256
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS LK + H + ++ +L D+++L +LS NQL LP K L L L N+
Sbjct: 15 LSQLKAEEKGHYQNLTKALKNPTDVQTL---DLSNNQLITLPKEIGQLKELEWLSLSRNQ 71
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L KL L L +N+++ + +G L L LDLS N+LT +P E+ +L
Sbjct: 72 LKTLPKE-IEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKK 130
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+SL L N + T+ +I Q
Sbjct: 131 LESLNLINNQLTTLPKEIGQ 150
>gi|410940571|ref|ZP_11372375.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410784315|gb|EKR73302.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 354
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+LS N+LVS +P I +++L +L L NQ+T+LP +NL L L
Sbjct: 200 QLKNLQKLNLSENQLVS--IPKEIGQLQNLRDLVLDRNQITILPTEVLQLQNLQELHLSE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + L L L+L+NN+++ + +G L NL L+L +N+LT++P E+ L
Sbjct: 258 NQLTSLSKEID-QLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316
Query: 119 FHLKSLFLGGNPIKT 133
L+ L L NP+ +
Sbjct: 317 KGLQRLELDSNPLSS 331
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L + S + + +++L EL+L N+LT LP ++L +L L N
Sbjct: 62 QLKNLQKLDLGGNELTALSKEI-VQLQNLQELSLHSNKLTSLPKEIEQLRSLKNLDLFRN 120
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L LNL N++S + VG L NL L LSDN++ +P E+ L
Sbjct: 121 QLVTVPKEVLL-LQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQ 179
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK LG N K ++LQ
Sbjct: 180 ELKEFILGNNHFKNFPGEVLQ 200
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK LDL N+LV+ + + +++L +LNLS N+L+ +P KNL L L N
Sbjct: 108 QLRSLKNLDLFRNQLVTVPKEVLL-LQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDN 166
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++ + L +L L NN V L NL L+LS+N+L +P E+ L
Sbjct: 167 QIVSLPKEIE-GLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSIPKEIGQLQ 225
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N I + ++LQ
Sbjct: 226 NLRDLVLDRNQITILPTEVLQ 246
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+TL LS N++VS LP I+ ++ L E L N P KNL L L
Sbjct: 154 QLKNLQTLKLSDNQIVS--LPKEIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSE 211
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + L L L L N+I+ + + V L NL L LS+N+LT + E+ L
Sbjct: 212 NQLVSIPKEIG-QLQNLRDLVLDRNQITILPTEVLQLQNLQELHLSENQLTSLSKEIDQL 270
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 271 KNLQWLSLRNNRLTTLPKEIGQ 292
>gi|124008083|ref|ZP_01692782.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123986497|gb|EAY26303.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 488
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL + NKL S+P I + + EL LSYN+L+ +P + +L +L L N
Sbjct: 143 LPNLETLVVESNKL--GSIPAEIGQLPKIKELKLSYNELSAVPEEIYNLASLENLYLHRN 200
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I N+ +D LT L L L +N+IS V +++ +L NL L LSDN+LT +P EL L
Sbjct: 201 DITNL-SDKVGQLTNLKNLTLASNQISSVPASIKNLKNLRYLTLSDNKLTALPEELGELN 259
Query: 120 HLKSLFLGGN 129
L L+LG N
Sbjct: 260 KLSMLYLGKN 269
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQ-LTML-PVCTDCKNLTHLLLGFNKINNME 65
L L KL + LF ++ L L+L++N+ +T L P KNL ++ L K+ ++
Sbjct: 79 LSLREKKLSALPEELF-KLKHLQRLDLAFNRDMTSLDPRIGKLKNLQYISLHSCKLTSLP 137
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ +L L L +++NK+ + + +G L + L LS NEL+ VP E+ +L L++L+
Sbjct: 138 KE-IGSLPNLETLVVESNKLGSIPAEIGQLPKIKELKLSYNELSAVPEEIYNLASLENLY 196
Query: 126 LGGNPIKTVRNDILQ 140
L N I + + + Q
Sbjct: 197 LHRNDITNLSDKVGQ 211
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D + L LN+ N+KI+++ NV L NL + N+LT +P + L LKSL +
Sbjct: 355 DLISAMPALRTLNISNSKITKIPGNVSKLKNLEYFYMYGNDLTALPAAIGQLTKLKSLSV 414
Query: 127 GGN 129
N
Sbjct: 415 SSN 417
>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 400
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L HN+L + LP I +++L EL L+YNQLT+LP KNL L L N
Sbjct: 91 LQNLRVLELIHNQLTT--LPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL + +L++N+LT +P E+ L
Sbjct: 149 QLMTLPKEIG-QLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLK 207
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 208 NLQVLELNNNQLTTLPKEIGQ 228
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I+ +++L L LSYNQL LP +NL L L N++
Sbjct: 48 VRVLDLSEQKL--KTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLT 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L L N+++ + + +G L NL L L +N+L +P E+ L +L+
Sbjct: 106 TLPKE-IGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQ 164
Query: 123 SLFLGGNPIKTVRNDILQ 140
+L+L N + T+ +I Q
Sbjct: 165 TLYLWNNQLTTLPKEIGQ 182
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L++ LP I +++L L L NQLT LP KNL L N
Sbjct: 137 LKNLQRLHLFNNQLMT--LPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L NN+++ + +G L NL LDL N+ T +P E+ L
Sbjct: 195 QLTTLPEEIG-KLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK 253
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N K + +I
Sbjct: 254 NLQVLHLHDNQFKIIPKEI 272
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L++N+L + LP I +++L L+L YNQ T+LP KNL L L N
Sbjct: 206 LKNLQVLELNNNQLTT--LPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDN 263
Query: 60 ----------KINNME-----NDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
K+ N++ ++ F + K L +L+L N+ + + L N
Sbjct: 264 QFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQN 323
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L+L N+LT +P E+ L +L+ L+L N KT+ +I Q
Sbjct: 324 LQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQ 366
>gi|195481934|ref|XP_002101839.1| GE15388 [Drosophila yakuba]
gi|194189363|gb|EDX02947.1| GE15388 [Drosophila yakuba]
Length = 372
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L LG NKI+++ D + + L +L+L N IS
Sbjct: 128 TLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIW-KMQSLHVLSLGGNLIS 186
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + +P ++ L +LKSL L N ++ + DI+
Sbjct: 187 EVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIV 239
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 5 LKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++T+ L+HN+LV LP L + +L L+LS N +T LP L L+ N + N
Sbjct: 49 IETMLLNHNRLVG--LPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTN 106
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+L K L + N +N G L L+LS N+LT P +++ L HLK
Sbjct: 107 A------SLPKSLLTKMAN------GNNGGSSSTLKELNLSGNQLTHFPEQVTELRHLKY 154
Query: 124 LFLGGNPIKTVRNDILQ 140
L+LGGN I +V DI +
Sbjct: 155 LYLGGNKISSVSKDIWK 171
>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
Length = 561
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
+++ +++L HN++ D +P +F R LT+LN++YN LT LP+ +N+ L LG
Sbjct: 333 QFTNVHSINLEHNQV--DRIPYGIFSRARHLTKLNMNYNGLTSLPLDIGSWQNMVELNLG 390
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + + +D L L +L L NN + ++ S++G+L L +LDL +N L +P E+
Sbjct: 391 TNHLTKVPDD-ISCLQSLEVLILSNNNLRKIPSSIGNLRKLRVLDLEENRLEGLPPEIGF 449
Query: 118 LFHLKSLFLGGNPIKTV 134
L L+ L + N + +
Sbjct: 450 LKDLQRLIVQSNQLSAL 466
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LG 57
L L+ LDL HNKL +P + + SL L L +N++ + V D +NL +L+ L
Sbjct: 148 LEKLRVLDLRHNKLCE--IPDVVYKLTSLITLYLRFNRIRV--VGEDIRNLKNLITLSLR 203
Query: 58 FNKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDL 95
NKI + +++ L++ L L+L++N++ ++ ++G L
Sbjct: 204 GNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSIGYL 263
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
NL L L N LT VP LS HL + GN I
Sbjct: 264 RNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQI 299
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 31 ELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+LS + ++ +P + NLTHL+ L NK+ + + L L L L N ++
Sbjct: 84 RLDLSNSSISQIP--SSVHNLTHLVEFYLYSNKLTTLPPE-IGCLVNLQTLGLSENSLTS 140
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + +L L +LDL N+L ++P + L L +L+L N I+ V DI
Sbjct: 141 LPDTLANLEKLRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGEDI 191
>gi|358333011|dbj|GAA35205.2| protein flightless-1 [Clonorchis sinensis]
Length = 1376
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINN 63
LK LDLS+N L P+ + +R+L +LNL N++T L TD L +L LG+N++
Sbjct: 260 LKELDLSNNMLTRIPEPV-LSLRTLRKLNLEKNEITDLSQVTDNWPKLEYLNLGYNQLGQ 318
Query: 64 MENDYFLTLTKLSLLNLKNNKIS--EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ LT L L + NN+++ + S +G L +L I D S NEL ++P L L
Sbjct: 319 LPAG-LTRLTSLRRLYINNNQLTFTGIPSGIGKLSDLEIFDASYNELENIPESLCRCGRL 377
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ + I
Sbjct: 378 RRLILTCNRLLTLPDAI 394
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 75 LSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L +LNL +N+I+ +SS+V +L +LDLSDN L +P +L L+ L L NP++
Sbjct: 164 LLVLNLSSNRITSISSDVFVQCTDLMLLDLSDNRLESLPAQLRRCNALQQLILSNNPLRH 223
Query: 134 VRNDILQDSKRI-ISHIKTS--RLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTL 190
+ L K++ I H+ + RLD N+ G + E E+++ L R
Sbjct: 224 AQLRSLAALKQLEILHLAGTERRLD----NIP-GELDKVEKLKELDLSNNMLTR------ 272
Query: 191 CKVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLTLCKVINIPESVYMNRPFALTYN 250
IPE V S ++N++K ++ +T N P+ Y+N L YN
Sbjct: 273 -----IPEPVL-----SLRTLRKLNLEKNEITDLSQVT----DNWPKLEYLN----LGYN 314
Query: 251 YVGDF 255
+G
Sbjct: 315 QLGQL 319
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 24/131 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L L+ + D++P +D + L EL+LS N LT +P
Sbjct: 232 LKQLEILHLAGTERRLDNIPGELDKVEKLKELDLSNNMLTRIP----------------- 274
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L+L L LNL+ N+I+++S + L L+L N+L +P L+ L
Sbjct: 275 ------EPVLSLRTLRKLNLEKNEITDLSQVTDNWPKLEYLNLGYNQLGQLPAGLTRLTS 328
Query: 121 LKSLFLGGNPI 131
L+ L++ N +
Sbjct: 329 LRRLYINNNQL 339
>gi|195566055|ref|XP_002106606.1| GD16031 [Drosophila simulans]
gi|194203988|gb|EDX17564.1| GD16031 [Drosophila simulans]
Length = 375
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L LG NKI+++ D + + L +L+L N IS
Sbjct: 131 TLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIW-KMQSLHVLSLGGNLIS 189
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + +P ++ L +LKSL L N ++ + DI+
Sbjct: 190 EVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHLPKDIV 242
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 5 LKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++T+ L+HN+LV LP L + +L L+LS N +T LP L L+ N + N
Sbjct: 49 IETMLLNHNRLVG--LPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTN 106
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+L K L + N ++ G L L+LS N+LT P +++ L HLK
Sbjct: 107 A------SLPKSLLTKMAN---GNANATGGSNSTLKELNLSGNQLTHFPEQVTELRHLKY 157
Query: 124 LFLGGNPIKTVRNDILQ 140
L+LGGN I +V DI +
Sbjct: 158 LYLGGNKISSVSKDIWK 174
>gi|195456954|ref|XP_002075361.1| GK17622 [Drosophila willistoni]
gi|194171446|gb|EDW86347.1| GK17622 [Drosophila willistoni]
Length = 369
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ + L +L +G NKI+++ D + + L +L+L N I+
Sbjct: 125 TLKELNLSGNQLTHFPEQVTEMRQLKYLYVGGNKISSISKDIW-KMQGLHVLSLGGNLIN 183
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + ++P ++ L +LKSL L N ++ + DI+
Sbjct: 184 EVPETVGSLSQLQALVLCDNLIENLPMSIARLKNLKSLLLHKNRLRHLPKDIV 236
>gi|307197002|gb|EFN78377.1| Leucine-rich repeat-containing protein 58 [Harpegnathos saltator]
Length = 347
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 12 HNKLVSDSL-PLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYF 69
HN+L +D L F ++ S+ ELNLS N+LT P + +L +L LG N I + + +
Sbjct: 94 HNQLTNDGLVKAFENLTSVRELNLSGNRLTEFPDQVLNLVDLKYLYLGGNLIGEITENIW 153
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L +L +L++ N++ EV S +G L L L L DN L +P +++L LKSL L N
Sbjct: 154 -KLQRLQVLSMGGNRLLEVPSTLGQLKALQALVLCDNMLESLPSSIANLTRLKSLLLHKN 212
Query: 130 PIKTVRNDILQ 140
++T+ +I++
Sbjct: 213 RLRTLPTEIIK 223
>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1196
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 20/185 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGF-- 58
LS L LDL +N+ +++ P D++ L EL L+ N+LT +P +D K L L LG
Sbjct: 280 LSELLVLDLEYNQ-IANIPPALCDLKQLVELTLNINKLTCIP--SDIKKLVRLQTLGLSD 336
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++N + + KL+ L L N +S + S + +L NL LDLS+N ++ +P EL +
Sbjct: 337 NQLNEIP-PALCDMPKLTKLTLDGNGLSAIPSAIRNLRNLQKLDLSNNNISVIPSELLHM 395
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLDY-HCQNVDGG-GMSSQESTSE 174
L L LG N +K + ++I LQ + +LD H + + G +SS + SE
Sbjct: 396 NQLIELRLGSNQLKCIPSEIGNLQ---------QLEKLDLSHNEGISGADSLSSLDELSE 446
Query: 175 INIDK 179
+ ++K
Sbjct: 447 LKLNK 451
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L LK ++L NK +P+F + L +LN++ N LT + T+ K L L L NK
Sbjct: 120 LKRLKKIELQSNKFDQMPVPIF-KLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNK 178
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+ DY TL KL L+L NN+I + +++GD+ +L +L L N LT +P ++ L
Sbjct: 179 LINI--DYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQ 236
Query: 121 LKSLFLGGNPIK 132
L+ + + N I+
Sbjct: 237 LERIDVSSNQIE 248
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L+ LDLSHN+ +S DSL + L+EL L+ N L +P K L L + N
Sbjct: 418 LQQLEKLDLSHNEGISGADSLS---SLDELSELKLNKNNLRSVPNMFKLKKLQVLHMNDN 474
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I + + L L L L N+++ + S +G+L NL L L N+LT++ + L
Sbjct: 475 LIKEIPEE-IQNLYSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLS 533
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N +KT+ ++
Sbjct: 534 MLRHLNLEYNKLKTLPEEV 552
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ L LS+N++ SLP I DM LT L L N LT LP +D K L L N
Sbjct: 191 LEELHLSNNEI--QSLPASIGDMSDLTVLYLDKNNLTTLP--SDIKKLHQLERIDVSSNQ 246
Query: 64 ME--NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E L +++ L L NN IS + ++ +L L +LDL N++ ++P L L L
Sbjct: 247 IEIFPPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQL 306
Query: 122 KSLFLGGNPIKTVRNDI 138
L L N + + +DI
Sbjct: 307 VELTLNINKLTCIPSDI 323
>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
vitripennis]
Length = 582
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++LKTL LS N L S LP ++ ++ L L+L +N+L +P V +LT L L FN
Sbjct: 146 LANLKTLALSENSLTS--LPDTLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFN 203
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D LT L++L+L+ NKI E+ + +G L NL D+S N L +P E+ +
Sbjct: 204 RVRYV-SDNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCD 262
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 263 QLSTLDLQHN 272
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCK-NLTHLLLGFNKINN 63
+++L HNK+ D +P +F ++LT+LN+ NQLT LP+ T N+ L LG N++
Sbjct: 360 SINLEHNKI--DKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQLVK 417
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D L L +L L NN + + +++ L L +LDL +N++ +P E+ L L+
Sbjct: 418 IPDD-IQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIESLPNEIGFLRDLQK 476
Query: 124 LFLGGNPIKTVRNDI 138
L L N + ++ I
Sbjct: 477 LILQSNQVTSLPRAI 491
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +L + LS N T P + N+ + L NKI+ + F L+ LN
Sbjct: 327 LLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLN 386
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N+++ + + G IN+ L+L N+L +P ++ L +L+ L L N +K + I
Sbjct: 387 MKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIA 446
Query: 140 QDSK 143
SK
Sbjct: 447 SLSK 450
>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
Length = 875
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L L+ L LS NKL ++LP+ I+ ++ L L LS N+L LPV + +NL L L N
Sbjct: 273 LKELRILQLSGNKL--ETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDN 330
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + L L L L+NNK+ + S +G+L +L LDL +N+L +P + L
Sbjct: 331 KLETLPA-AIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGELK 389
Query: 120 HLKSLFLGGNPIKTV 134
+L+ L L GN ++T+
Sbjct: 390 NLRELNLSGNKLETL 404
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL L N+L ++LP I ++ +L +L+L NQ P V KNL L+L N
Sbjct: 112 LENLSTLHLDDNEL--ETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + L KL L L NK+ + +G+L NL L+LS N+L +P E+ L
Sbjct: 170 KLESFPT-VIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELK 228
Query: 120 HLKSLFLGGNPIK 132
+L+ LFLG N ++
Sbjct: 229 NLQHLFLGDNKLE 241
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L L+ L LS NKL ++LP+ I ++ +L +L L+ N+L LP + NL L L N
Sbjct: 296 LKELRILQLSGNKL--ETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNN 353
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL- 118
K+ + ++ L L L+LKNNK+ + + +G+L NL L+LS N+L +P E+ L
Sbjct: 354 KLKILPSE-IGELGDLQYLDLKNNKLETLPAAIGELKNLRELNLSGNKLETLPIEIEKLS 412
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
++ L L GN I V + +R + I R+
Sbjct: 413 GSMQLLNLRGNNISEVGDGERTVGRRELRAIFGDRV 448
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 29 LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L +L LS+N L LP + KNL HL+L NK+ + +D L LS L+L +N++
Sbjct: 69 LEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTL-SDVIGELENLSTLHLDDNELET 127
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
+ + +G+L NL LDL DN+ P + L +L+ L L N +++
Sbjct: 128 LPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLES 173
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 19/142 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+TL+L NKL LP I ++++L LNLS N+L LP + KNL HL LG N
Sbjct: 181 LRKLQTLELLGNKL--KLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDN 238
Query: 60 K-------INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
K I +EN L L L N + + + L L IL LS N+L +P
Sbjct: 239 KLEILPIAIGELEN--------LQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLP 290
Query: 113 CELSSLFHLKSLFLGGNPIKTV 134
E+ L L+ L L GN ++T+
Sbjct: 291 VEIEKLKELRILQLSGNKLETL 312
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L +NKL +S P I ++R L L L N+L +LP + KNL +L L N
Sbjct: 158 LKNLERLILDNNKL--ESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + L L L L +NK+ + +G+L NL L L N L +P E+ L
Sbjct: 216 KLESLPPE-IGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLK 274
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L GN ++T+ +I
Sbjct: 275 ELRILQLSGNKLETLPVEI 293
>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 1107
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L LDL N++ +P I ++ +LT L L NQ+T +P + NL L L +N
Sbjct: 217 LTNLTQLDLGDNQITE--IPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYN 274
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + LT L+ L L +NKI+E+ + +L NL LDLSDN++T++P +++L
Sbjct: 275 QITEIPK-AIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLT 333
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L+ N I + I
Sbjct: 334 NLTELYFNYNKITQIAEAI 352
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ +LT L L NQ+T P NLT L L N+I + + LT L+ L L +N
Sbjct: 124 NLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIP-EAIANLTNLTHLILFSN 182
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+I+E+ + +L NL LDL DN++T++P +++L +L L LG N I + I
Sbjct: 183 QITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAI 237
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L ++NK ++ + +LTEL+LS NQ+T +P + NLT L L +NK
Sbjct: 332 LTNLTELYFNYNK-ITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNK 390
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L+ L+L N+I+++ + L L LDL N L P L S++
Sbjct: 391 ITQIA-EAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEILGSVYE 449
Query: 121 LKSL 124
+ S+
Sbjct: 450 VGSV 453
>gi|320583417|gb|EFW97630.1| hypothetical protein HPODL_0260 [Ogataea parapolymorpha DL-1]
Length = 881
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 12/140 (8%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKIN 62
LK L L+ NK+ S F ++ +L+ L+LSYN LT +P K NL L L +NK+
Sbjct: 371 LKHLSLTENKITRISEEAFTNLENLSSLDLSYNNLTEIPHAALAKLHNLKSLNLSYNKLV 430
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
N + + TLTKL++LNL+ N+++ + + + + +L +DL N+LT V E+ LF L
Sbjct: 431 NTKT-FPKTLTKLTILNLRGNQLTNLDT-LENASSLEKIDLRQNKLTKV-AEMKPLFLLN 487
Query: 123 S-------LFLGGNPIKTVR 135
+ L+L GNP+ + R
Sbjct: 488 NDVVKLNILYLVGNPVASNR 507
>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 378
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L EL L+YNQLT P K+L L L N
Sbjct: 69 LKNLQMLDLSDNQLII--LPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNN 126
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN++ +S + L NL L L +N+LT P E+ L
Sbjct: 127 QLTILPVEIG-QLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQ 185
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRIISH 148
+LKSLFL N + T +I LQ+ + + H
Sbjct: 186 NLKSLFLSNNQLTTFPKEIGKLQNLQELYLH 216
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + P I+ ++SL +L LS NQLT+LPV +NL L L N
Sbjct: 92 LKNLQELFLNYNQLTT--FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ +G L NL L LS+N+LT P E+ L
Sbjct: 150 QLKTISKE-IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T +I Q
Sbjct: 209 NLQELYLHDNQLTTFTKEIGQ 229
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L L L NQ +LP +NL L L +N+ + + F L L +L+L N+
Sbjct: 253 LKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVE-FGQLKNLKMLSLDANQ 311
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
++ + +G L NL +L+L N+LT +P E+ L +L++L+L N +
Sbjct: 312 LTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ LFL N + T +I
Sbjct: 54 LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 113
Query: 140 Q 140
Q
Sbjct: 114 Q 114
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L L LS+N+L LP+ I +++L ELNL NQL T+ KNL L L N
Sbjct: 115 LKSLHKLYLSNNQLTI--LPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTD--------- 110
++ + L L L L NN+++ +G L NL L L DN+LT
Sbjct: 173 QLTAFPKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLK 231
Query: 111 --------------VPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+P E+ L +L++L+L N K + +I Q
Sbjct: 232 NLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQ 275
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L L LSYNQ +PV KNL L L N++ + + L L +LNL N
Sbjct: 275 QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIG-KLKNLKMLNLDAN 333
Query: 84 KISEVSSNVGDLINLAILDLSDNELT 109
+++ + +G L NL L L +N+L+
Sbjct: 334 QLTTIPKEIGQLQNLQTLYLRNNQLS 359
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT P +NL L L N+
Sbjct: 138 LQNLRELNLWNNQLKTISKEI-EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQ 196
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-----------------------LIN 97
+ + L L L L +N+++ + +G L N
Sbjct: 197 LTTFPKEIG-KLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKN 255
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L L DN+ +P E+ L +L+ LFL N KT+
Sbjct: 256 LQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTI 292
>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
Length = 1011
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L L +N++ +P I + +LT+ LS NQ+T +P + NLT L+L N
Sbjct: 148 LTNLTQLVLFNNQITQ--IPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNN 205
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L+L NNKI+++ + +LINL LDL +N++T +P ++ L
Sbjct: 206 QITQIP-EAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEAIAKLT 264
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L N I + I
Sbjct: 265 NLTQLILSDNKITQIPEAI 283
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L LDL +NK+ +P I + +LT+L LS N++T +P NLT L L N
Sbjct: 240 LINLTQLDLLNNKITQ--IPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSN 297
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
KI + + LT L+ L+L++NKI+++ + L NL LDLSDN +T++P E+
Sbjct: 298 KITQIP-EAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEM 352
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
HL+ L L KL + D++ + +LT+L+LS NQ+T +P NLT L+L N+
Sbjct: 104 HLEELILIRVKLTEIPDAIA---KLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQ 160
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L+ L NN+I+++ + +L NL L LS+N++T +P +++L +
Sbjct: 161 ITQIP-EAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTN 219
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N I + I
Sbjct: 220 LTQLDLLNNKITQIPEAI 237
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 23 FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
F+ R L ++ S N L LP+ NL L + N + ++ D + L L L
Sbjct: 55 FVGDRYLEKV--SGNNLKTLPLELLGLPNLRKLDISGNPLESIP-DVVTQILHLEELILI 111
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K++E+ + L NL LDLS+N++T +P ++ L +L L L N I + I
Sbjct: 112 RVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAI 168
>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 423
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + + +D+ +GGG
Sbjct: 405 RIRTLLPKCEIDF-----EGGG 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNHNEFTTVSKEVM 199
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|328768383|gb|EGF78429.1| hypothetical protein BATDEDRAFT_90637 [Batrachochytrium
dendrobatidis JAM81]
Length = 632
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 27/153 (17%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
HLK LDLS NK+ +S+SLPL + L ELNLS+NQL LP NLT LL+ N++
Sbjct: 503 HLKILDLSRNKITQLSESLPL---LPRLDELNLSFNQLVYLPSQLSFPNLTVLLVSNNRL 559
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ + + ILD+S+N + +P EL+ L +
Sbjct: 560 EAIDPHMLIQCIP----------------------GIQILDVSNNSIQTIPPELALLPCI 597
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
KSL L GN + R ILQ I SR+
Sbjct: 598 KSLQLSGNMFRVPRAAILQKGTEAICEYLKSRI 630
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTEL---NLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+LS+N L + S ID SL +L ++ +N+L+ L V C L L L FN
Sbjct: 237 QLTELNLSYNLLANLSA-FSIDTISLPKLKILDVKHNRLSSLTVKLTCPELVDLCLSFNN 295
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++++ F L +L L+L++N + V + L L LDL++N ++ + EL L +
Sbjct: 296 LSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLHRLKRLDLTNNNISRLQPELGLLHN 355
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L + GNPI+ + L + +++ H++
Sbjct: 356 LTMFLVYGNPIRGL--PTLDSTVKLLEHLQ 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 30/165 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGF 58
LS L LDLS NKL +LP I M LT+LN+S NQLT L + LT L L +
Sbjct: 188 LSRLSHLDLSDNKL--SALPPSISKMTCLTKLNVSKNQLTSLESVDLSAIVQLTELNLSY 245
Query: 59 NKINNMENDYF--LTLTKLSLLNLKNNKISEVS------------------SNVG----- 93
N + N+ ++L KL +L++K+N++S ++ S++
Sbjct: 246 NLLANLSAFSIDTISLPKLKILDVKHNRLSSLTVKLTCPELVDLCLSFNNLSSIAPGVFF 305
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
DLI L LDL DN L VP + L LK L L N I ++ ++
Sbjct: 306 DLIQLETLDLRDNALCVVPDDTLQLHRLKRLDLTNNNISRLQPEL 350
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYF-LTLTKLSLL 78
P D+ +L L+L NQ++ +P V + L+ L L FN I + + F L L +L
Sbjct: 115 PRIADLGALVMLDLHNNQISSIPDVVGSLQALSILNLSFNCITCLPDSLFQLPLVEL--- 171
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+++ N + ++S +G+L L+ LDLSDN+L+ +P +S + L L + N
Sbjct: 172 HVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISKMTCLTKLNVSKN 222
>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
Length = 564
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I + +L EL+L+ NQL LP + L L L N
Sbjct: 34 LQNLQTLGLSENQLTT--FPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 91
Query: 60 KINNMENDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
+I + LT L L +L+L N+++ + +G L NL LDL N+LT +
Sbjct: 92 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 151
Query: 112 PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
P E++ L +LK L+L GN + V +I + I +K +R+ + ++
Sbjct: 152 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIE 202
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 393 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 450
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 451 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 509
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 510 HNLTELYLQYNRIKTLPEEI 529
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 30/167 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL N+L +LP I+ +++L EL L+ N+LT++P + +NLT L L N
Sbjct: 135 LQNLKSLDLGGNQLT--TLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNN-----------------------KISEVSSNVGDLI 96
+I+ + + + L LNL+ N +I + + +G L
Sbjct: 193 RISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 251
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 252 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 298
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK-------INNMENDYFL------ 70
+++L LNL NQL LPV +NL L L N+ I +EN L
Sbjct: 10 QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQ 69
Query: 71 ---------TLTKLSLLNL---------KNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
L KL LNL K N+++ + + +G L NL IL LS N L +P
Sbjct: 70 LKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLP 129
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDI 138
E+ L +LKSL LGGN + T+ +I
Sbjct: 130 REIGQLQNLKSLDLGGNQLTTLPREI 155
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL++N+++ + +G L NL L LS+N+LT P E+ L +L+ L L GN +
Sbjct: 11 LQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQL 70
Query: 132 KTVRNDILQDSK 143
KT+ +I Q K
Sbjct: 71 KTLPKEIGQLQK 82
>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 875
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
+ LDLS L ++ P + SL ELNLS NQ++ +P +L L L N+I +
Sbjct: 19 EKLDLSGRNL-TEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREI 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ LT L +L L NN+ISE+ + L +L LDLSDN++ ++P L+ L L+ L
Sbjct: 78 P-EALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQEL 136
Query: 125 FLGGNPIKTV 134
L N I+ +
Sbjct: 137 DLSDNQIREI 146
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ LDLS N+ + + + SL EL+LS NQ+ +P +L L L N
Sbjct: 106 QLTSLQRLDLSDNQ-IREIPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L +L L NN+I E+ + L +L L L +N++ ++P L+ L
Sbjct: 165 QIKEIP-EALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLV 223
Query: 120 HLKSLFLGGNPIKTVRNDILQDS 142
+LK L L NPI V +I++
Sbjct: 224 NLKRLVLQNNPITNVPPEIIRQG 246
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ L+ L+LS+N+ +S+ + SL L L NQ+ +P T +L L L N+
Sbjct: 38 LTSLQELNLSNNQ-ISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQ 96
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ + + LT L L+L +N+I E+ + L +L LDLSDN++ ++P L+ L
Sbjct: 97 ISEIP-EALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREIPEALAHLTS 155
Query: 121 LKSLFLGGNPIKTV 134
L+ LFL N IK +
Sbjct: 156 LELLFLNNNQIKEI 169
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L+ L+ LDLS N++ + ++L + SL L L+ NQ+ +P +L L L
Sbjct: 130 LTSLQELDLSDNQIREIPEAL---AHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSN 186
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L L+LKNN+I E+ + L+NL L L +N +T+VP E+
Sbjct: 187 NQIREIP-EALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPITNVPPEIIRQ 245
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHI-----------KTSRLDYHCQNVDGGGMS 167
K++ GNP + KR ++ + KTS L N G
Sbjct: 246 GWGKTILDDGNPQAIFSYLKHKGEKRPLNELKVLLVGEGDVGKTSLLKRLLHNTFNSG-- 303
Query: 168 SQESTSEINIDKYKLDRTKTLTL 190
+ T INI+K+ L + + L
Sbjct: 304 -EPKTPGINIEKWPLPQKPDIRL 325
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 2 LSHLKTLDLSH--NKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L+HL +L + + N +S+ + SL L+LS NQ+ +P K L HL
Sbjct: 81 LTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIP-----KALAHL----- 130
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
T L L+L +N+I E+ + L +L +L L++N++ ++P L+ L
Sbjct: 131 -------------TSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLT 177
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N I+ + + Q
Sbjct: 178 SLQVLYLSNNQIREIPEALAQ 198
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L LNL NN+ISE+ + L +L L L +N++ ++P L+ L L+ L+L N I
Sbjct: 38 LTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQI 97
Query: 132 KTVRNDILQ 140
+ + Q
Sbjct: 98 SEIPEALAQ 106
>gi|413918659|gb|AFW58591.1| protein lap1 [Zea mays]
Length = 753
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 29/166 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
+LS+LK L++S N+L +LP I RSL ELN+SYN LT LP + D NL L +
Sbjct: 515 LLSNLKILNVSSNRL--RALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIH 572
Query: 58 FNKINNMENDY----------------------FLTLTKLSLLNLKNN--KISEVSSNVG 93
NK+ ++ + F L+ L +LNL +N + E+ + G
Sbjct: 573 MNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFG 632
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL+NL LDLS+N++ +P L L+ L L NP+ DI+
Sbjct: 633 DLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIV 678
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L+ N LVS LP I + S L LN+S N+L LP + C++L L + +N
Sbjct: 493 LGHLEELFLTANDLVS--LPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYN 550
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L + NK+ + S+V ++ +L +LD NEL C L SLF
Sbjct: 551 GLTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNEL----CGLPSLF 606
>gi|421113331|ref|ZP_15573775.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|422005173|ref|ZP_16352370.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|410801105|gb|EKS07279.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|417256187|gb|EKT85625.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 312
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ S LP I ++++L EL+LS N+LT LPV + KNL L L N
Sbjct: 48 LRNLKELNLGRNQITS--LPKEIGELQNLKELDLSDNRLTSLPVEIGNLKNLEILTLYRN 105
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + +FL+L L +L L NK + + L NL LD ++N L ++P L L
Sbjct: 106 RISVLP-KHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L GN +K +
Sbjct: 165 NLNILYLLGNELKAL 179
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDLS N+L S LP+ I ++++L L L N++++LP +NL L L N
Sbjct: 71 LQNLKELDLSDNRLTS--LPVEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L L L L+ N++ E+ +G L NL IL L NEL +P S L
Sbjct: 129 KFRKFPEE-ILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKALPSSFSELQ 187
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 188 SLKSLNLNYNRFQVFPKELI 207
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS NK + + +++L L+ + N+L LP +NL L L N+
Sbjct: 117 LQNLKILYLSQNKFRKFPEEI-LQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNE 175
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L L LNL N+ + L NL IL+L+ N+L +P E+ +L
Sbjct: 176 LKALPSS-FSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDK 234
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFL GN +K + + I
Sbjct: 235 LRVLFLEGNQLKQIPSGI 252
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLLG 57
L +L+ LD + N+L LP + L LN+ Y N+L LP ++ ++L L L
Sbjct: 140 LQNLEWLDFNENRL--KELP--ERLGQLQNLNILYLLGNELKALPSSFSELQSLKSLNLN 195
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N+ + ++L L +L L N++ + +G L L +L L N+L +P +
Sbjct: 196 YNRFQVFPKE-LISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEK 254
Query: 118 LFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L +L+SL+L N + T+ +I LQ+ K +
Sbjct: 255 LQNLESLYLQENQLTTLPEEIGFLQNLKEL 284
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
+ + L L LNL N+I+ + +G+L NL LDLSDN LT +P E+ +L +L+ L L
Sbjct: 43 EAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIGNLKNLEILTL 102
Query: 127 GGNPIKTV 134
N I +
Sbjct: 103 YRNRISVL 110
>gi|443724415|gb|ELU12432.1| hypothetical protein CAPTEDRAFT_150790 [Capitella teleta]
Length = 346
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L+TL L +N+L ++SLP F + SL +N S N+ T PV T+ L L LG N
Sbjct: 75 LSSLRTLYLRNNELDNESLPKDFGILESLKVVNFSGNRFTDFPVQVTELPQLHVLHLGAN 134
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI ++ + +L L +L + N+++EV VG L+NL L L DN + +P + +L
Sbjct: 135 KIKSIPKE-IGSLQSLEVLYMGGNRLTEVPDEVGHLLNLKSLVLCDNRINSLPGTIPNLQ 193
Query: 120 HLKSLFLGGNPIKTV 134
+L+SL L N I T+
Sbjct: 194 NLRSLSLHNNHISTL 208
>gi|189236516|ref|XP_975405.2| PREDICTED: similar to AGAP004458-PA [Tribolium castaneum]
gi|270005319|gb|EFA01767.1| hypothetical protein TcasGA2_TC007366 [Tribolium castaneum]
Length = 349
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
HL TL +N+ ++SLP F + SL ELNLS N P + NL +L LG NKI
Sbjct: 89 HLTTLVAKNNRFSNESLPKSFAESASLRELNLSGNVFEQFPEQLFEFTNLKYLYLGGNKI 148
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L L +L++ N++ EV S +G L L L L DN + +P +++L +L
Sbjct: 149 KTIPKN-IKKLNCLQILSMGGNQLVEVPSTLGQLKQLQALVLCDNLIESLPSNIANLHNL 207
Query: 122 KSLFLGGNPIKTVRNDIL 139
KSL L N ++T+ +I+
Sbjct: 208 KSLQLHKNKLRTLPPEII 225
>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 429
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +R+L EL+LS+N LT LP +NL L L
Sbjct: 70 LQNLKLLDLGHNQLT--ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L L+L N ++ + VG L NL LDL N L +P E+ L
Sbjct: 128 KLTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 187 NLQELDLNSNKLTTLPKEIRQ 207
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 208 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 266 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 325 NLQELCLDENQLTTLPKEIEQ 345
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 116 LENLQRLNLNSQKLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 174 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 233 NLKTLNLIVTQLTTLPKEI 251
>gi|253401369|gb|ACT31447.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L HN+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDHNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDDKVVRTVT 238
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHLKSLFL 126
F LTKL+ LNL +N++ +S+ V DL L L L++N+L +P + L L L+L
Sbjct: 54 FRGLTKLTWLNLDHNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 113
Query: 127 GGNPIKTVRNDIL 139
GGN +K++ + +
Sbjct: 114 GGNQLKSLPSGVF 126
>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
Length = 724
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 273 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 329
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 330 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 385
Query: 120 HLKSLF 125
+LKSL
Sbjct: 386 NLKSLV 391
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 463 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 520
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 521 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQR 579
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 580 LILQTNQITMLPRSI 594
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 430 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 489
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 490 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 548
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 206 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLTS 264
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 265 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 317
>gi|226502182|ref|NP_001149497.1| LOC100283123 [Zea mays]
gi|195627564|gb|ACG35612.1| protein lap1 [Zea mays]
Length = 502
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 29/166 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
+LS+LK L++S N+L +LP I RSL ELN+SYN LT LP + D NL L +
Sbjct: 264 LLSNLKILNVSSNRL--RALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIH 321
Query: 58 FNKINNMENDY----------------------FLTLTKLSLLNLKNN--KISEVSSNVG 93
NK+ ++ + F L+ L +LNL +N + E+ + G
Sbjct: 322 MNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFG 381
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL+NL LDLS+N++ +P L L+ L L NP+ DI+
Sbjct: 382 DLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIV 427
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L+ N LVS LP I + S L LN+S N+L LP + C++L L + +N
Sbjct: 242 LGHLEELFLTANDLVS--LPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYN 299
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L + NK+ + S+V ++ +L +LD NEL C L SLF
Sbjct: 300 GLTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNEL----CGLPSLF 355
>gi|126570622|gb|ABO21246.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 247
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+LS L + S F + LT LNL YNQL LP V + L L L FN++ ++
Sbjct: 38 LELSSTGLATLSDTAFRGLTKLTWLNLQYNQLQTLPPGVFDQLRELKDLYLQFNQLKSLP 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL+ L L N++ + + + D L NL LDL N+L +P L +L++
Sbjct: 98 PRVFDSLTKLTWLTLAQNQLQSIEAGLFDKLTNLQTLDLQVNQLQSIPNGAFDKLVNLET 157
Query: 124 LFLGGNPIKTV 134
L+L N +++V
Sbjct: 158 LWLRENKLQSV 168
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + +F +R L +L L +NQL LP V LT L L N
Sbjct: 56 LTKLTWLNLQYNQLQTLPPGVFDQLRELKDLYLQFNQLKSLPPRVFDSLTKLTWLTLAQN 115
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP 112
++ ++E F LT L L+L+ N++ + + D L+NL L L +N+L VP
Sbjct: 116 QLQSIEAGLFDKLTNLQTLDLQVNQLQSIPNGAFDKLVNLETLWLRENKLQSVP 169
>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
Length = 694
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 229 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 285
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 286 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 341
Query: 120 HLKSLF 125
+LKSL
Sbjct: 342 NLKSLV 347
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 419 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 477 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQR 535
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 536 LILQTNQITMLPRSI 550
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 386 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 445
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505
Query: 140 QDSKRIISHIKTSRLD 155
K I ++ +R++
Sbjct: 506 NLRKLRILDLEENRIE 521
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 161 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 219
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 220 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 273
>gi|207080310|ref|NP_001128872.1| DKFZP459K227 protein [Pongo abelii]
gi|55731898|emb|CAH92658.1| hypothetical protein [Pongo abelii]
Length = 436
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 29 LTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
L L L+ N + PV + + L + N+IN + F LS LN+K+N+++
Sbjct: 333 LNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ + G ++ L+L+ N+LT +P ++S L L+ L
Sbjct: 393 SLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVLLRFL 430
>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 525
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+LV+ LP +++++L L+LS NQL +LP KNL L L N
Sbjct: 70 LKNLRELSLKWNQLVT--LPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L N+++ + +G L NL L+LS+N LT VP E+ L
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L GN + T+ N+I Q
Sbjct: 187 NLQELHLSGNQLVTLPNEIGQ 207
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+LV LP I +++L L+L N+LT LP +NL L N
Sbjct: 93 LQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ V +G L NL L LS N+L +P E+ L
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ I
Sbjct: 210 NLQELNLKWNQLVTLPKGI 228
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+ +L LNLS N+LT +P KNL L L N++ + N+ L L LNLK N
Sbjct: 161 QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIG-QLRNLQELNLKWN 219
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + +G L NL LDL +N LT +P E L L+ L L N
Sbjct: 220 QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNN 265
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L LS N+LV+ LP I +R+L ELNL +NQL LP +NL L L N
Sbjct: 185 LKNLQELHLSGNQLVT--LPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHEN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
++ + + F L L LNL NN++ + +G
Sbjct: 243 RLTILPRE-FGQLQSLQKLNLVNNRLIILPKEIG 275
>gi|66812098|ref|XP_640228.1| hypothetical protein DDB_G0282725 [Dictyostelium discoideum AX4]
gi|60468212|gb|EAL66222.1| hypothetical protein DDB_G0282725 [Dictyostelium discoideum AX4]
Length = 1775
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+LS NK+ L ++ L +L++SYN ++++ CK L L L FN
Sbjct: 42 QLLNLKFLNLSRNKITR--LDGISNILKLEDLDVSYNAISIISDDLYQCKLLEKLNLSFN 99
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+INN+++ + L L +LNL NN +S++ + +G L NL L+LS N+L +P + L
Sbjct: 100 QINNIQSSFIAQLKLLKVLNLSNNLLSQLPNEIGFLNNLTTLNLSFNKLQQLPKTIGRLS 159
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L + N ++ + N+I
Sbjct: 160 SLQKLIINNNCLQLLPNEI 178
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L++L TL+LS NKL LP I + SL +L ++ N L +LP N LL
Sbjct: 134 FLNNLTTLNLSFNKL--QQLPKTIGRLSSLQKLIINNNCLQLLP------NEIGELLELQ 185
Query: 60 KINNMENDYFLTLT------KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
+++ EN+ + T L+ L L NN E+ +G+L+ L L+L N+L D+P
Sbjct: 186 QLDCAENELRILPTTIGNCKSLTKLYLDNNDFLEMIPELGNLMKLKELNLRSNQLVDLPS 245
Query: 114 ELSSLFHLKSLFLGGN 129
S L +L+ L L N
Sbjct: 246 SFSKLINLQILDLDDN 261
>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
latipes]
Length = 582
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LSGLVTLALSENSLTS--LPDSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP--VCT--------------- 46
L L++ N+L S LPL F S+ ELNL+ NQL +P VC
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLK 438
Query: 47 -------DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ + N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N L +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLAIMSIENCPLTHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 AQIVAGGPS 566
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L+ L L L NKL SLP + + L L LS N LT LP D K L L L N
Sbjct: 122 LNQLAELYLYSNKL--QSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + LT L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPAVVY-RLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPKEI 257
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + MLP + L L L NK+ ++ + L+ L L L N ++ +
Sbjct: 105 LDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVG-CLSGLVTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ L L +LDL N+L ++P + L L +L+L N I TV DI SK + I+
Sbjct: 164 SLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +LT L L+ N PV + + L + N IN + F LS LN
Sbjct: 326 LLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K+N+++ + + G ++ L+L+ N+L +P ++ L L+ L L N +K + + I
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGI 444
>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
Length = 525
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+LV+ LP +++++L L+LS NQL +LP KNL L L N
Sbjct: 70 LKNLRELSLKWNQLVT--LPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L N+++ + +G L NL L+LS+N LT VP E+ L
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L GN + T+ N+I Q
Sbjct: 187 NLQELHLSGNQLVTLPNEIGQ 207
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+LV LP I +++L L+L N+LT LP +NL L N
Sbjct: 93 LQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ V +G L NL L LS N+L +P E+ L
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ I
Sbjct: 210 NLQELNLKWNQLVTLPKGI 228
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+ +L LNLS N+LT +P KNL L L N++ + N+ L L LNLK N
Sbjct: 161 QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIG-QLRNLQELNLKWN 219
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + +G L NL LDL +N LT +P E L L+ L L N
Sbjct: 220 QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNN 265
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L LS N+LV+ LP I +R+L ELNL +NQL LP +NL L L N
Sbjct: 185 LKNLQELHLSGNQLVT--LPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHEN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
++ + + F L L LNL NN++ + +G
Sbjct: 243 RLTILPRE-FGQLQSLQKLNLVNNRLIILPKEIG 275
>gi|344923241|ref|ZP_08776702.1| hypothetical protein COdytL_01180 [Candidatus Odyssella
thessalonicensis L13]
Length = 375
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
HLKTLD+S N + P + +LT LNLS+N + LP NL L+L N +
Sbjct: 156 HLKTLDVSSNSI--QHFPRITSLPALTMLNLSHNDIAYLPEEIGILSNLEELILDNNHLT 213
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L L K++ L + NN++ EV S + +L +L L L++N L +P E+ L L
Sbjct: 214 ALPKS-LLQLKKITRLCISNNQLDEVPSRIYELKSLQFLGLTNNNLRTLPKEMGQLPRLL 272
Query: 123 SLFLGGNPI 131
+L L GNP+
Sbjct: 273 TLALNGNPL 281
>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 378
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L EL L+YNQLT P K+L L L N
Sbjct: 69 LKNLQMLDLSDNQLII--LPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNN 126
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN++ +S + L NL L L +N+LT P E+ L
Sbjct: 127 QLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQ 185
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LKSLFL N + T +I
Sbjct: 186 NLKSLFLSNNQLTTFPKEI 204
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 230 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+LT +P E+ L
Sbjct: 288 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 346
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 347 NLQTLYLRNN 356
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 184 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 301 NLKMLSLDANQLTALPKEI 319
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L L LS+N+L LP+ I +++L ELNL NQL T+ KNL L L N
Sbjct: 115 LKSLHKLYLSNNQLTI--LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L L NN+++ +G L NL L LS+N+LT P E+ L
Sbjct: 173 QLTAFPKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LG N + T+ N+I
Sbjct: 232 KLQWLGLGDNQLTTIPNEI 250
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L + P I +++L L LS NQLT P +NL L L N
Sbjct: 161 LKNLQKLYLDNNQLTA--FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L
Sbjct: 219 QLTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQ 277
Query: 120 HLKSLFLGGNPIKTV 134
+L+ LFL N KT+
Sbjct: 278 NLQVLFLSYNQFKTI 292
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT P +NL L L N+
Sbjct: 138 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQ 196
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 197 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 255
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 256 LQELNLDVNQLTTIPKEIGQ 275
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ LFL N + T +I
Sbjct: 54 LSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 113
Query: 140 Q 140
Q
Sbjct: 114 Q 114
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L + +P I +++L L LSYNQ +PV KNL L L N
Sbjct: 253 LQKLQELNLDVNQLTT--IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN 310
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L +LNL N+++ + +G L NL L L +N+L+
Sbjct: 311 QLTALPKEIG-KLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 359
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 28/138 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL LP I +++L L+LS NQL +LP KNL L L +N++
Sbjct: 49 VRVLILSEQKL--KVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL- 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L +L L LS+N+LT +P E+ L +L+
Sbjct: 106 -----------------------TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQ 142
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N +KT+ +I Q
Sbjct: 143 ELNLWNNQLKTISKEIEQ 160
>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 333
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I +++L LNL NQL LP KNL L L N
Sbjct: 116 LQNLKVLFLNNNQLTT--LPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL NN++ + + L NL L LS+N+L +P E+ L
Sbjct: 174 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + T+ N+I Q
Sbjct: 233 KLQKLYLNANQLTTIPNEIAQ 253
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +N+L++ LP I +++L EL LS NQL LP + L L L N
Sbjct: 185 LEKLQELNLWNNQLIT--LPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNAN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L N+ + G L NL L+L N+LT +P E+ L
Sbjct: 243 QLTTIPNE-IAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 301
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 302 NLQTLYLRNN 311
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L ELNL NQLT + +I
Sbjct: 50 VRVLDLSEQKL--KALPKKIGQLKNLQELNLDANQLTTI---------------LKEIEQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L +L+ +N+I+ +S +G L NL +L L++N+LT +P E+ L +L++
Sbjct: 93 LKN--------LQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQT 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 145 LNLWNNQLITLPKEIAQ 161
>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
Length = 423
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL +L L NQLT +P +L L L N
Sbjct: 176 LTSLEALYLHGNQLTS--VPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGN 233
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L NN+++ + + +G L +L L L DN+LT VP E+ L
Sbjct: 234 QLTSLPAEIG-QLTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQLT 292
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+L GN + +V +I Q
Sbjct: 293 SLKELWLHGNRLTSVPAEIGQ 313
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N L S +P + + +L EL L NQLT LP +L L L N
Sbjct: 15 LTSLTKLNLGRNHLTS--VPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNN 72
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + LT L+ L L N+++ V + +G L +L L L DN+LT VP E+ L
Sbjct: 73 KLTIAPAEIG-QLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLT 131
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L+L GN + ++ +I Q
Sbjct: 132 TLEALWLHGNQLTSLPAEIGQ 152
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L+ L+ L L +NKL P I + +LTEL L NQLT +P +L L L N
Sbjct: 61 LTSLRELYLCNNKLTIA--PAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDN 118
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + LT L L L N+++ + + +G L +L L L +N LT +P E+ L
Sbjct: 119 QLTGVPAE-IVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLT 177
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L+L GN + +V +I Q
Sbjct: 178 SLEALYLHGNQLTSVPAEIGQ 198
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L +N+L S LP I + SL L L NQLT +P +L L L N
Sbjct: 245 LTSLTGLRLYNNRLTS--LPAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L+L NN+++ + +G L +L L L N+L VP E+ L
Sbjct: 303 RLTSVPAEIG-QLTSLGALSLYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLS 361
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L+LG N + ++ +I Q
Sbjct: 362 SLLWLYLGSNQLTSIPAEIAQ 382
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I + SL EL L NQLT +P L L L N
Sbjct: 84 LTALTELLLHGNQLTS--VPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L+ L L NN+++ + + +G L +L L L N+LT VP E+ L
Sbjct: 142 QLTSLPAEIG-QLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLT 200
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N + +V +I Q
Sbjct: 201 SLEKLELYDNQLTSVPAEIGQ 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L S +P I + SL EL L N+LT +P +L L L N
Sbjct: 268 LTSLEALWLHDNQLTS--VPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNN 325
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L N++ V +G L +L L L N+LT +P E++ L
Sbjct: 326 RLTSLPEEIG-QLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLT 384
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN + +V I
Sbjct: 385 SLSVLDLSGNQLTSVPAAI 403
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L N+L S +P I + SL L+L N+LT LP +L L LG N
Sbjct: 291 LTSLKELWLHGNRLTS--VPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRLYLGRN 348
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + L+ L L L +N+++ + + + L +L++LDLS N+LT VP + L
Sbjct: 349 QLMSVPEEIG-QLSSLLWLYLGSNQLTSIPAEIAQLTSLSVLDLSGNQLTSVPAAIREL 406
>gi|421117596|ref|ZP_15577955.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010810|gb|EKO68942.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 286
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS KL +LP+ I +++L L L YNQLT+LP KNL L L N++
Sbjct: 48 EVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L L+L NN+++ + + + L NL L LS+N+ P E+ L +L
Sbjct: 106 TTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 164
Query: 122 KSLFLGGNPIKTVRNDI 138
K LFL N + + N+I
Sbjct: 165 KVLFLNNNQLTILPNEI 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 115 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 173 QLTILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE 231
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 232 NLQTLDLRNNQLKTLPKEIEQ 252
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK+L LS N+ + P I +++L L L+ NQLT+LP K L +L L N
Sbjct: 138 LKNLKSLYLSENQFAT--FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + VG L NL LDL +N+L +P E+ L
Sbjct: 196 QLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK 254
Query: 120 HLKSLFLGGNPI 131
+L++L L N +
Sbjct: 255 NLQTLNLWNNQL 266
>gi|418705776|ref|ZP_13266635.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410764608|gb|EKR35316.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 332
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS KL +LP+ I +++L L L YNQLT+LP
Sbjct: 48 EVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L++N+++ +S ++ L NL
Sbjct: 106 TTLSKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLSKDIEQLQNL 164
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 206
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 161 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 219 QLTILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE 277
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ N+I Q
Sbjct: 278 NLQTLDLRNNQLKTLPNEIEQ 298
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L L N+L + S + +++L L+L NQLT+LP KNL L L N+
Sbjct: 92 LKNLQLLYLRSNRLTTLSKEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNR 150
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L +
Sbjct: 151 LTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQN 209
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK LFL N + + N+I
Sbjct: 210 LKVLFLNNNQLTILPNEI 227
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK+L LS N+ + P I +++L L L+ NQLT+LP K L +L L N
Sbjct: 184 LKNLKSLYLSENQFAT--FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + VG L NL LDL +N+L +P E+ L
Sbjct: 242 QLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPNEIEQLK 300
Query: 120 HLKSLFLGGNPIKT 133
+L++L+L N + +
Sbjct: 301 NLQTLYLNNNQLSS 314
>gi|328725142|ref|XP_001948776.2| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 5-like isoform 1 [Acyrthosiphon pisum]
gi|328725144|ref|XP_003248361.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 5-like isoform 2 [Acyrthosiphon pisum]
Length = 1183
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
L +L L N L F + L L L N+LT +P + L L LG N I
Sbjct: 132 QLSSLQLDQNHLTEIDDQCFDQLSQLRNLRLENNKLTKVPKQALSLVPTLEALNLGSNSI 191
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSLFH 120
++ ND F +L L +L LK N+I V + L +L IL+L DN+L +P L+ L
Sbjct: 192 VDISNDSFSSLPNLVILLLKRNQIGFVDETAFESLTSLKILELDDNQLDTIPVALAKLTS 251
Query: 121 LKSLFLGGNPIKTVRNDILQDSK 143
L+ L L GN IK V +LQ S+
Sbjct: 252 LQELSLSGNNIKFVPEGVLQRSQ 274
>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
Length = 332
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS KL +LP+ I +++L L L YNQLT+LP
Sbjct: 48 EVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L++N+++ +S ++ L NL
Sbjct: 106 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLSKDIEQLQNL 164
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 206
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 161 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 219 QLTILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE 277
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ N+I Q
Sbjct: 278 NLQTLDLRNNQLKTLPNEIEQ 298
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 92 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 150 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N + + N+I
Sbjct: 209 NLKVLFLNNNQLTILPNEI 227
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK+L LS N+ + P I +++L L L+ NQLT+LP K L +L L N
Sbjct: 184 LKNLKSLYLSENQFAT--FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + VG L NL LDL +N+L +P E+ L
Sbjct: 242 QLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPNEIEQLK 300
Query: 120 HLKSLFLGGNPIKT 133
+L++L+L N + +
Sbjct: 301 NLQTLYLNNNQLSS 314
>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 432
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +R+L EL+LS+N LT LP +NL L L
Sbjct: 70 LQNLKLLDLGHNQLT--ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L L+L N ++ + VG L NL LDL N L +P E+ L
Sbjct: 128 KLTTLPKEIG-QLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 187 NLQELDLNSNKLTTLPKEIRQ 207
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 208 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 266 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 325 NLQELCLDENQLTTLPKEIEQ 345
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L+L NQLT LP +NL L L N
Sbjct: 277 LQNLEILVLRENRITA--LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L L +N+LT P E+ L
Sbjct: 335 QLTTLPKEIE-QLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK 393
Query: 120 HLKSLFLGGNPIKTVR----NDILQDSKRIISHI 149
+L+ L L NP+ + D Q+ K I+ +I
Sbjct: 394 NLQELHLYLNPLSSKEKKGFEDYFQNVKFILKNI 427
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 116 LENLQRLNLNSQKLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 174 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 233 NLKTLNLIVTQLTTLPKEI 251
>gi|418680656|ref|ZP_13241900.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327600|gb|EJO79845.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|455665929|gb|EMF31411.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 309
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS KL +LP+ I +++L L L YNQLT+LP
Sbjct: 48 EVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L++N+++ +S ++ L NL
Sbjct: 106 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLSKDIEQLQNL 164
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 206
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 92 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 150 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N + + N+I
Sbjct: 209 NLKVLFLNNNQLTILPNEI 227
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ L L N+L + S + +++L L+LS NQLT LP KNL L L N+
Sbjct: 138 LKNLQLLYLRSNRLTTLSKDIE-QLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQ 196
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L L +L L NN+++ + + + L L L LSDN+L +P E+ L +
Sbjct: 197 FATFPKEIG-QLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKN 255
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LKSL L N +KT+ N+I Q
Sbjct: 256 LKSLDLRNNQLKTLPNEIEQ 275
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 161 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L L +N++ + + L NL LDL +N+L +P E+ L
Sbjct: 219 QLTILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIEQLK 277
Query: 120 HLKSLFLGGNPI 131
+L++L+L N +
Sbjct: 278 NLQTLYLNNNQL 289
>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
homolog (C. elegans) (SHOC2) [Danio rerio]
gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
Length = 561
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 124 LSGLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFN 181
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 182 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 240
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 241 QITNLDLQHN 250
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 334 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 393
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 394 TKIPED-ICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDL 452
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 453 QKLVLTNNQLTTLPRGI 469
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP--VCT--------------- 46
L L++ N+L S LPL F S+ ELNL+ NQLT +P +C
Sbjct: 360 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLK 417
Query: 47 -------DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 418 KLPYGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 476
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N L +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 477 YLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 536
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 537 PQIVAGGPS 545
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +LT L L+ N PV + + L + N+IN + F LS LN
Sbjct: 305 LLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 364
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+K+N+++ + + G ++ L+L+ N+LT +P ++ L L+ L L N +K
Sbjct: 365 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLK 417
>gi|443477390|ref|ZP_21067241.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017486|gb|ELS31914.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
Length = 945
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++LK L + N++ + DS+ ++ +LT L+LS NQ+T +P V + NLT L G
Sbjct: 20 LTNLKELHIPFNQITQIPDSI---CNLANLTLLDLSSNQITQIPDVICNLVNLTQLYFGC 76
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L L+LL+L NN IS ++ + L L L+LS N+++ +P E+S L
Sbjct: 77 NQITQIP-DAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPEEISQL 135
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
++L+ + L N I + + I
Sbjct: 136 YNLEEIHLNSNRINIIPDTI 155
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 13 NKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFL 70
N+L + +F + +L EL++ +NQ+T +P +C + NLT L L N+I + D
Sbjct: 8 NRLTAIPQEIF-QLTNLKELHIPFNQITQIPDSIC-NLANLTLLDLSSNQITQIP-DVIC 64
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L L+ L N+I+++ + +L NL +L LS+N ++++ +L L L+ L L N
Sbjct: 65 NLVNLTQLYFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNK 124
Query: 131 IKTVRNDILQ 140
I T+ +I Q
Sbjct: 125 ISTIPEEISQ 134
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L+ L+LS NK+ ++P I + +L E++L+ N++ ++P D NL L L +N
Sbjct: 112 LSKLQKLNLSLNKI--STIPEEISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K D L L + L+ N+I+ + + L L L L++N+++ +P E+S+L
Sbjct: 170 KQICTIPDTISKLFNLVTIYLEGNQIATIPHGISQLSKLQTLMLNENQISIIPNEISNLS 229
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N I+ + + I
Sbjct: 230 NLQELSLYKNQIRLIPDSI 248
>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 333
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I +++L LNL NQL LP KNL L L N
Sbjct: 116 LQNLKVLFLNNNQLTT--LPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL NN++ + + L NL L LS+N+L +P E+ L
Sbjct: 174 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + T+ N+I Q
Sbjct: 233 KLQKLYLNANQLTTIPNEIAQ 253
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +N+L++ LP I +++L EL LS NQL LP + L L L N
Sbjct: 185 LEKLQELNLWNNQLIT--LPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNAN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L N+ + G L NL L+L N+LT +P E+ L
Sbjct: 243 QLTTIPNE-IAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 301
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 302 NLQTLYLRNN 311
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L ELNL NQLT + +I
Sbjct: 50 VRVLDLSEQKL--KALPKKIGQLKNLQELNLDANQLTTI---------------LKEIEQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L +L+ +N+I+ +S +G L NL +L L++N+LT +P E+ L +L++
Sbjct: 93 LKN--------LQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQT 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 145 LNLWNNQLITLPKEIAQ 161
>gi|326920203|ref|XP_003206364.1| PREDICTED: leucine-rich repeat and death domain-containing
protein-like [Meleagris gallopavo]
Length = 796
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLS 76
SLP I +R LT L+LS+N L+ LP C C +L LL+ N + + + F +L+KL+
Sbjct: 56 SLPPDIGTLRFLTHLDLSFNSLSTLPSCIPCLTSLRMLLVSHNNLVALPEN-FGSLSKLT 114
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ N++ ++ ++G+L L LDLS+N L +P E+ +L L L GN + ++
Sbjct: 115 FFSAMKNQLKDLPQSIGELAALEELDLSENVLEHLPEEVGNLHSCTELDLSGNQLSSI 172
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 33/132 (25%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L+ LDLS N L + LP + ++ S TEL+LS NQL+ +P C LG
Sbjct: 133 LAALEELDLSENVL--EHLPEEVGNLHSCTELDLSGNQLSSIPDC----------LG--- 177
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS--L 118
L L L+L +N + V +++ L NL+ LDL N L VP E+ +
Sbjct: 178 ----------NLKSLRRLHLHSNLLVTVPASLASLPNLSRLDLQSNLLRAVPPEIQTAPF 227
Query: 119 FHLKSLFLGGNP 130
HL+ GNP
Sbjct: 228 VHLR-----GNP 234
Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L+ L+ L +SHN LV+ LP F + LT + NQL LP + L L L N
Sbjct: 87 LTSLRMLLVSHNNLVA--LPENFGSLSKLTFFSAMKNQLKDLPQSIGELAALEELDLSEN 144
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + L + L+L N++S + +G+L +L L L N L VP L+SL
Sbjct: 145 VLEHLPEEVG-NLHSCTELDLSGNQLSSIPDCLGNLKSLRRLHLHSNLLVTVPASLASLP 203
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L N ++ V +I
Sbjct: 204 NLSRLDLQSNLLRAVPPEI 222
>gi|18542898|gb|AAL75740.1|AC091724_13 Putative receptor-like protein kinase [Oryza sativa Japonica Group]
gi|110288629|gb|ABB46782.2| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
Length = 1130
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLP-VCTDCKNLTHLLLGFN 59
L L LDLS N L S +P F L L+L NQL LP T+C NLT L L +N
Sbjct: 201 LPELTYLDLSSNNL-SGPMPEFPPRCGLVYLSLYSNQLAGELPRSLTNCGNLTVLYLSYN 259
Query: 60 KINNMENDYFLTLTKLSLLNLKNNK-ISEVSSNVGDLINLAILDLSDNELT-DVPCELSS 117
KI D+F ++ L L L +N + E+ +++G+L+NL L +S+N T +P +
Sbjct: 260 KIGGEVPDFFASMANLQTLYLDDNAFVGELPASIGELVNLEELVVSENAFTGTIPEAIGR 319
Query: 118 LFHLKSLFLGGN 129
L L+L GN
Sbjct: 320 CRSLTMLYLNGN 331
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFNKI 61
L LDL +N +S S+P I + SL L L+ N LT +P T + L L LG N +
Sbjct: 613 LALLDLGNN-FLSGSIPAEITTLGSLQNLLLAGNNLTGTIPDSFTATQALLELQLGDNSL 671
Query: 62 NNMENDYFLTLTKLS-LLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELSSL 118
+L +S LN+ NN++S ++ S++G+L +L +LDLS+N L+ +P +L ++
Sbjct: 672 EGAIPHSLGSLQYISKALNISNNQLSGQIPSSLGNLQDLEVLDLSNNSLSGIIPSQLINM 731
Query: 119 FHLKSLFLGGNPI 131
L + L N +
Sbjct: 732 ISLSVVNLSFNKL 744
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLP-VCTDCKNLTHLLLGF 58
+++L+TL L N V + LP I ++ +L EL +S N T +P C++LT L L
Sbjct: 272 MANLQTLYLDDNAFVGE-LPASIGELVNLEELVVSENAFTGTIPEAIGRCRSLTMLYLNG 330
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELS 116
N+ + LT+L L ++ +N I+ E+ +G L + L +N L+ +P +++
Sbjct: 331 NRFTGSIPKFIGDLTRLQLFSIADNGITGEIPPEIGKCRGLVEIALQNNSLSGMIPPDIA 390
Query: 117 SLFHLKSLFLGGNPIK 132
L L+ L L N ++
Sbjct: 391 ELNQLQKLSLFDNILR 406
>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
Length = 680
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 229 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 285
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 286 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 341
Query: 120 HLKSLFLGG 128
+LKSL G
Sbjct: 342 NLKSLVRLG 350
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 419 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 477 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQR 535
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 536 LILQTNQITMLPRSI 550
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 386 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 445
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 504
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLTS 220
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 273
>gi|456876344|gb|EMF91453.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 1300
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LT+LNL N+L+ LP + L HL L N+ + + D L+L L +LN+++N
Sbjct: 944 NLGRLTKLNLGSNKLSALPAGIGKLEQLIHLYLDSNQFS-IFPDAVLSLKNLEMLNVRSN 1002
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
+I +S +G L +L L+L N+L+DVP +S + L L LG N +
Sbjct: 1003 QIPSLSEGIGTLASLKDLNLQGNQLSDVPSAISKIPQLTELDLGKNKL 1050
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L L+L NKL +LP I + L L L NQ ++ P KNL L + N
Sbjct: 945 LGRLTKLNLGSNKL--SALPAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNVRSN 1002
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++ ++ TL L LNL+ N++S+V S + + L LDL N+LT P ++ +
Sbjct: 1003 QIPSL-SEGIGTLASLKDLNLQGNQLSDVPSAISKIPQLTELDLGKNKLTKFPEAVTLIK 1061
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N I ++ + I
Sbjct: 1062 NLRVLDLSENQIASIPDSI 1080
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ L++ N++ S S + + SL +LNL NQL+ +P + LT L LG NK
Sbjct: 991 LKNLEMLNVRSNQIPSLSEGIGT-LASLKDLNLQGNQLSDVPSAISKIPQLTELDLGKNK 1049
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L + L +L+L N+I+ + ++G + L +LDL D + +P +L L
Sbjct: 1050 LTKFPEAVTL-IKNLRVLDLSENQIASIPDSIGAISTLEVLDLEDLPINSLPAQLEKLEA 1108
Query: 121 LKSLFL 126
L SL L
Sbjct: 1109 LISLRL 1114
Score = 37.7 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
T L+ L+++N ++E+ ++G+L L L+L N+L+ +P + L L L+L N
Sbjct: 921 TFKSLTSLSMRNCNLTEIPESIGNLGRLTKLNLGSNKLSALPAGIGKLEQLIHLYLDSNQ 980
Query: 131 IKTVRNDIL 139
+ +L
Sbjct: 981 FSIFPDAVL 989
>gi|24216023|ref|NP_713504.1| hypothetical protein LA_3324 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075104|ref|YP_005989423.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197251|gb|AAN50522.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458895|gb|AER03440.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 329
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 28/130 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L +LP I+ +++L ELNL YNQLT+LP KNL L LG+N
Sbjct: 204 LKNLQLLDLSYNQL--KTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYN 261
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +G L NL +L L++N+LT +P E+ L
Sbjct: 262 QL------------------------TTLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 297
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 298 NLQELYLNNN 307
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+LS KL + LP I +++L ELNL NQ+T+LP +NL L L +N++
Sbjct: 46 VRILNLSEQKLTT--LPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQLT 103
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L L NN+I+ + + L NL +L LS+N+LT +P E+ L +L+
Sbjct: 104 ILPKE-IEQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQ 162
Query: 123 SLFLGGNPIKTVRNDILQ 140
+L+LG N + T +I Q
Sbjct: 163 TLYLGNNRLTTFPKEIEQ 180
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL L +N+L + P I+ +++L L L NQLT+LP KNL L L +N
Sbjct: 158 LKNLQTLYLGNNRLTT--FPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ + + L NL L L N+LT +P E+ L
Sbjct: 216 QLKTLPKE-IEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTTLPKEIGQLQ 274
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK LFL N + T+ +I Q
Sbjct: 275 NLKVLFLNNNQLTTLPKEIGQ 295
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L LS+N+L + LP I+ +++L L L N+LT P KNL L L N
Sbjct: 135 LQNLKVLFLSNNQLTT--LPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL+L N++ + + L NL L+L N+LT +P E+ L
Sbjct: 193 QLTVLPQE-IKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLK 251
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+LG N + T+ +I Q
Sbjct: 252 NLQTLYLGYNQLTTLPKEIGQ 272
>gi|223949627|gb|ACN28897.1| unknown [Zea mays]
Length = 502
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 29/166 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
+LS+LK L++S N+L +LP I RSL ELN+SYN LT LP + D NL L +
Sbjct: 264 LLSNLKILNVSSNRL--RALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIH 321
Query: 58 FNKINNMENDY----------------------FLTLTKLSLLNLKNN--KISEVSSNVG 93
NK+ ++ + F L+ L +LNL +N + E+ + G
Sbjct: 322 MNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFG 381
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL+NL LDLS+N++ +P L L+ L L NP+ DI+
Sbjct: 382 DLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIV 427
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L+ N LVS LP I + S L LN+S N+L LP + C++L L + +N
Sbjct: 242 LGHLEELFLTANDLVS--LPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYN 299
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L + NK+ + S+V ++ +L +LD NEL C L SLF
Sbjct: 300 GLTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNEL----CGLPSLF 355
>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
Length = 529
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D TL+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ S
Sbjct: 203 RITTVEKD-IKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +LA L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEI 234
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + LT L L+ N PV + + L + N+
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 426
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N +K + + I
Sbjct: 427 LEVLILSNNLLKKLPHGI 444
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L L++ N+L S LPL F S+ ELNL+ NQLT +P + +L L+L N +
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L+L+ NK+ + + + L +L L L++N+LT +P + L +L
Sbjct: 439 KLPHGIG-NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 123 SLFLGGN 129
L LG N
Sbjct: 498 HLGLGEN 504
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ L L L NKL SLP + + +L L LS N LT LP D K L L L N
Sbjct: 122 LTQLTELYLYSNKL--QSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + LT L+ L L+ N+I+ V ++ L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPSVVY-RLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPEEI 257
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+L+ + MLP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVG-CLVNLVTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK + I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
>gi|158335132|ref|YP_001516304.1| hypothetical protein AM1_1973 [Acaryochloris marina MBIC11017]
gi|158305373|gb|ABW26990.1| leucine-rich-repeat protein [Acaryochloris marina MBIC11017]
Length = 842
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+TL L N+L + +P I +++L L+L NQLT +P + KNL L L
Sbjct: 37 QLKNLQTLSLQGNQLTT--IPDAISQLKNLQTLSLQRNQLTAIPDAISQLKNLQTLSLQG 94
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L L L+L +N+++ + + L+NL LDL +++LT +P +S L
Sbjct: 95 NQLTAIP-DAIGQLVNLQTLDLHDNQLTTIPDTISQLVNLQELDLRNDQLTTIPDAISQL 153
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
+L+ L+L GN + + +IL
Sbjct: 154 SNLQKLYLHGNELLKIPAEIL 174
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
++LDLS+ L +P I +++L L+L NQLT +P + KNL L L N++
Sbjct: 19 RSLDLSYLGLTE--IPDAISQLKNLQTLSLQGNQLTTIPDAISQLKNLQTLSLQRNQLTA 76
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ D L L L+L+ N+++ + +G L+NL LDL DN+LT +P +S L +L+
Sbjct: 77 IP-DAISQLKNLQTLSLQGNQLTAIPDAIGQLVNLQTLDLHDNQLTTIPDTISQLVNLQE 135
Query: 124 LFLGGNPIKTVRNDILQ 140
L L + + T+ + I Q
Sbjct: 136 LDLRNDQLTTIPDAISQ 152
>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 423
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N+
Sbjct: 63 LKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNE 121
Query: 61 INNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+ L
Sbjct: 122 LVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQL 178
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
LK+L L N TV +++
Sbjct: 179 KSLKNLDLNHNEFTTVSKEVM 199
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS+ L LP KNL L LG N+ + + + L L LNL NNK++ +
Sbjct: 46 LDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPK 104
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 105 EIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 423
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNHNEFTTVSKEVM 199
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 423
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N + TV +++
Sbjct: 178 LKSLKNLDLNHNELTTVSKEVM 199
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 LTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
Length = 527
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 115 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 172 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 227
Query: 120 HLKSLFLGG 128
+LKSL G
Sbjct: 228 NLKSLVRLG 236
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 305 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 362
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 363 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQR 421
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 422 LILQTNQITMLPRSI 436
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 272 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 331
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 332 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 391
Query: 140 QDSKRIISHIKTSRLD 155
K I ++ +R++
Sbjct: 392 NLRKLRILDLEENRIE 407
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 47 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 105
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 106 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 159
>gi|125981717|ref|XP_001354862.1| GA17074 [Drosophila pseudoobscura pseudoobscura]
gi|54643174|gb|EAL31918.1| GA17074 [Drosophila pseudoobscura pseudoobscura]
Length = 372
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L +G NKI + D + + L +L+L N IS
Sbjct: 126 TLKELNLSGNQLTHFPEQVTELRHLKYLYVGGNKITGISKDIW-KMQSLHVLSLGGNLIS 184
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + ++P ++ L +LKSL L N ++ + DI+
Sbjct: 185 EVPDAVGSLSLLQALVLCDNLVENLPMSIARLKNLKSLLLHKNRLRHLPKDIV 237
>gi|260798366|ref|XP_002594171.1| hypothetical protein BRAFLDRAFT_65021 [Branchiostoma floridae]
gi|229279404|gb|EEN50182.1| hypothetical protein BRAFLDRAFT_65021 [Branchiostoma floridae]
Length = 365
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L +NK+ F ++ SLTEL L NQL LP +L L L NK++ +
Sbjct: 78 LHLGNNKISLIESKTFSNLTSLTELYLYQNQLASLPADAFAGLGHLQRLELYHNKLSALP 137
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHLKS 123
ND F L L L+L N+++ +S+++ L NLAILD+ NEL +P ++ + L L+
Sbjct: 138 NDIFNGLGHLQRLDLYQNELTSLSADIFNGLGNLAILDMYQNELRSLPADIFAGLGKLQE 197
Query: 124 LFLGGNPIKTVRNDIL 139
L+LG N + ++ +DI
Sbjct: 198 LWLGQNELASLPSDIF 213
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L HL+ LDL N+L S S +F + +L L++ N+L LP + L L LG N
Sbjct: 144 LGHLQRLDLYQNELTSLSADIFNGLGNLAILDMYQNELRSLPADIFAGLGKLQELWLGQN 203
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
++ ++ +D F+ L L L L NK+ + +NV L N+ L L +N+LT +P +
Sbjct: 204 ELASLPSDIFVGLGSLRELWLGQNKLPSLPANVFQGLHNVTSLHLDNNQLTSLPADAFEG 263
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L L+ L L N I ++ + ++
Sbjct: 264 LDSLEWLDLHRNDISSIEAGAFSGTPKL 291
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV----------------- 44
L L+ L L NKL S +F + ++T L+L NQLT LP
Sbjct: 216 LGSLRELWLGQNKLPSLPANVFQGLHNVTSLHLDNNQLTSLPADAFEGLDSLEWLDLHRN 275
Query: 45 ---------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI----SEVSSN 91
+ L HL L +N I+++ D F+ L +L L L +NKI +E SN
Sbjct: 276 DISSIEAGAFSGTPKLQHLDLEYNNISSIAADAFVNLPRLQALLLSHNKINVFPAEALSN 335
Query: 92 VGDLINLAILDLSDNEL 108
+ D+ +L L + DNE+
Sbjct: 336 I-DISSLTDLQIEDNEM 351
>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
Length = 645
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 233 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 289
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 290 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 345
Query: 120 HLKSLF 125
+LKSL
Sbjct: 346 NLKSLV 351
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 423 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 480
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 481 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQR 539
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 540 LILQTNQITMLPRSI 554
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 390 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 449
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 450 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 508
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 165 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 223
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 224 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 277
>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 400
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L EL+LS N+LT LP +NL L LG N
Sbjct: 206 LQKLQSLGLGNNQLTA--LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 264 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 323 NLQVLDLGSNQLTTLPKEIGQ 343
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I +++L L+L NQL LP KNL L L +N
Sbjct: 137 LQNLQELYLRDNQLTT--LPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + + +G L L L LS N LT +P E+ L
Sbjct: 195 QIKTIPKE-IEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 254 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 296
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L L +N+L++ LP I +++L L LSYNQ+ +P + + L L LG N
Sbjct: 160 LKNLQRLHLWNNQLMT--LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L+L N+++ + + +G L NL L L N+LT +P E+ L
Sbjct: 218 QLTALPNEIG-QLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+L N + T+ DI Q
Sbjct: 277 NLQTLYLRSNRLTTLSKDIEQ 297
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L LS N+L + LP I +++L +L L NQLT+LP KNL L L N
Sbjct: 229 LQKLQELSLSTNRLTT--LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 287 RLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L N + T+ +I Q
Sbjct: 346 NLQVFELNNNQLTTLPKEIGQ 366
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L EL LSYNQL LP +NL L L N++
Sbjct: 48 VRVLDLSQQKL--KTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L L N++ + + L NL L L DN+LT +P E+ L +L+
Sbjct: 106 TLPEE-IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 164
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 165 RLHLWNNQLMTLPEEIGQ 182
>gi|304268956|dbj|BAJ14930.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 222
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
++ + L L++N+L + + F + LT L L N+L LPV +NL L L +N+
Sbjct: 40 ANTEKLQLNYNQLANITAKAFHGLTRLTYLTLDQNKLQSLPVGVFDQLENLQDLRLNYNQ 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPC-ELSSL 118
+ ++ F LTKL+LLNL N++ + V D L+NL L LSDN+L VP SL
Sbjct: 100 LKSLPPRVFDRLTKLTLLNLGFNQLQSIPKGVFDKLVNLETLWLSDNKLQSVPVGAFDSL 159
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
L L L NP +DI+
Sbjct: 160 AQLTDLRLDTNPWDCACSDII 180
>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 400
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L EL+LS N+LT LP +NL L LG N
Sbjct: 206 LQKLQSLGLGNNQLTA--LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L++N+++ +S ++ L NL LDL +N+LT P E+ L
Sbjct: 264 QLTILPNEIG-QLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ +I Q
Sbjct: 323 NLQVLDLGSNQLTTLPKEIGQ 343
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I +++L L+L NQL LP KNL L L +N
Sbjct: 137 LQNLQELYLRDNQLTT--LPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYN 194
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L KL L L NN+++ + + +G L L L LS N LT +P E+ L
Sbjct: 195 QIKTIPKE-IEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L+ L+LG N + + N+I Q +++++RL ++++
Sbjct: 254 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIE 296
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L LS N+L + LP I +++L +L L NQLT+LP KNL L L N
Sbjct: 229 LQKLQELSLSTNRLTT--LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + L NL +LDL N+LT +P E+ L
Sbjct: 287 RLTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L N + T+ N+I Q
Sbjct: 346 NLQVFELNNNQLTTLPNEIGQ 366
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L L +N+L++ LP I +++L L LSYNQ+ +P + + L L LG N
Sbjct: 160 LKNLQRLHLWNNQLMT--LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL L+L N+++ + + +G L NL L L N+LT +P E+ L
Sbjct: 218 QLTALPNEIG-QLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+L N + T+ DI Q
Sbjct: 277 NLQTLYLRSNRLTTLSKDIEQ 297
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L EL LSYNQL LP +NL L L N++
Sbjct: 48 VRVLDLSQQKL--KTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L L N++ + + L NL L L DN+LT +P E+ L +L+
Sbjct: 106 TLPEE-IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 164
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 165 RLHLWNNQLMTLPEEIGQ 182
>gi|327271185|ref|XP_003220368.1| PREDICTED: fibromodulin-like [Anolis carolinensis]
Length = 379
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
++L+ L L N++ S+ + +F +++L L L +N LT +P ++L L L +N+
Sbjct: 132 TNLEWLALHSNQITSEKMGKRVFAKLKNLERLYLDHNNLTKMPTPLP-RSLRELHLAYNQ 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ + ++ L L+ L L +N+I E+ +N+ L +L + DLS N+L VP L S
Sbjct: 191 ISKVPSNALEGLENLTALYLSHNQIHEIGANLKGLKSLILADLSYNQLRRVPDGLPS--S 248
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
L+ L+L N I T+ +D + S +++ R+ ++ +G ++ ++S + +D
Sbjct: 249 LEQLYLEHNHINTIPDDYFKISPKLL----YVRMSHNSLTSEGLAPNAFNASSLLELD-- 302
Query: 181 KLDRTKTLTLCKVINIPESVYMRGMSSQECTI 212
L + + +V E++Y++G E TI
Sbjct: 303 -LSYNRLQKIPRVSTSLENLYLQGNRINEFTI 333
>gi|320166210|gb|EFW43109.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 768
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLL---- 55
L+ L L L+ N++ S S F + +LT L+L +Q+T +PV T LT LL
Sbjct: 35 LTALTQLWLNQNQIASISANAFTGLPALTLLHLGQSQITSIPVSALTSLTALTQLLAAQR 94
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC-E 114
L N+I ++ D F LT L++LNL NN+I+ +S+++ DL LA L L N+++ +
Sbjct: 95 LDANQITSIPADAFTGLTMLTVLNLFNNQITSISASLTDLSLLAQLALHSNQISSLSANT 154
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
+ L L L L NP T+ + + + +S
Sbjct: 155 FTGLTALTYLTLNDNPFTTLPPGLFKGLQNALS 187
>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
Length = 641
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 229 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 285
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 286 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 341
Query: 120 HLKSLF 125
+LKSL
Sbjct: 342 NLKSLV 347
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 419 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 477 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQR 535
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 536 LILQTNQITMLPRSI 550
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 386 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 445
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505
Query: 140 QDSKRIISHIKTSRLD 155
K I ++ +R++
Sbjct: 506 NLRKLRILDLEENRIE 521
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 161 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 219
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 220 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 273
>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 379
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I +++L +LNL YNQLT +L KNL L L +N
Sbjct: 116 LQNLQTLILSVNRLTT--FPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N++ + + +G L NL L LS+N+LT +P E+ L
Sbjct: 174 QLTTLLQEIG-QLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLK 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L LG N + + +I Q
Sbjct: 233 NLQALILGDNQLTILPKEIGQ 253
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L +LP I +++L EL LS NQLT+LP KNL L+LG N
Sbjct: 185 LKNLQKLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL NN+++ + +G L L L LS N+LT +P E+ L
Sbjct: 243 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 302 NLQELYLNDNQLTTLPKEIGQ 322
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + L +++L +LNL YNQLT +L KNL L L N+
Sbjct: 139 LKNLQKLNLDYNQLTT-LLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNR 197
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + N+ L L L L NN+++ + +G L NL L L DN+LT +P E+ L +
Sbjct: 198 LKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQN 256
Query: 121 LKSLFLGGNPIKTVRNDILQDSK 143
LK L+ N + + +I Q K
Sbjct: 257 LKLLYSVNNELTILPQEIGQLQK 279
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL++N+ +LP I +++L ELNL NQL LP +NL L+L N
Sbjct: 70 LQNLKSLDLANNQF--KTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LNL N+++ + +G L NL L+L N+LT + E+ L
Sbjct: 128 RLTTFPQEIG-QLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +K + N+I Q
Sbjct: 187 NLQKLNLDKNRLKALPNEIGQ 207
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 32 LNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTK-------LSLLNLKNNK 84
LNLS +LT LP + K L +L K ++ N+ F TL K L LNL NN+
Sbjct: 53 LNLSSQKLTTLP--KEIKQLQNL-----KSLDLANNQFKTLPKEIGQLQNLQELNLWNNQ 105
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
+ + +G L NL L LS N LT P E+ L +L+ L L N + T+ +I Q
Sbjct: 106 LKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQ---- 161
Query: 145 IISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKL 182
+ +++ LDY+ + ++ ++N+DK +L
Sbjct: 162 -LKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRL 198
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL + K++ + + L NL LDL++N+ +P E+ L +L+ L L N +K +
Sbjct: 52 VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111
Query: 137 DI--LQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVI 194
+I LQ+ + +I + +RL Q + G + N+ K LD + TL + I
Sbjct: 112 EIGQLQNLQTLI--LSVNRLTTFPQEI--GQLK--------NLQKLNLDYNQLTTLLQEI 159
>gi|440800716|gb|ELR21751.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 2741
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 10/140 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-----CT---DCKNLTHL 54
+ L+ L L+ N L+ LPL I L L+L N + + + C D +L++
Sbjct: 718 NELRELHLNKNYLME--LPLEIFQLRLKSLSLFGNPMQRIKIKIYEQCQGWRDTLDLSYE 775
Query: 55 LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+G ++++++ D F LT+L L L +N IS +SS V L +L +L+L DN L +P +
Sbjct: 776 RIGSDELSHLPTDLFPGLTRLRRLVLNHNDISLLSSGVAQLASLEVLELEDNRLNVLPWQ 835
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
+ ++ +LK L L GNP+ V
Sbjct: 836 VGNMPNLKVLKLDGNPLTKV 855
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 28 SLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+LT L+LS N+L+ LP D +L L L FN + ++ + + K+ +L + + +
Sbjct: 657 NLTSLDLSSNRLSSLPAALGDIASLRVLDLRFNLLQSLPPE--IGKLKVGIL-VTHFTAA 713
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
VS+N L L L+ N L ++P E+ L LKSL L GNP++ ++ I + +
Sbjct: 714 AVSTN-----ELRELHLNKNYLMELPLEIFQL-RLKSLSLFGNPMQRIKIKIYEQCQ 764
>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N + TV +++
Sbjct: 178 LKSLKNLDLNHNELTTVSKEVM 199
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 LTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQILPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVM 199
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|456822602|gb|EMF71072.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 237
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++TLDLS+NKL++ LP I ++ L L+LS NQL LP + L +L L N+
Sbjct: 40 TDVQTLDLSNNKLIT--LPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQ 97
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L +L L+L N+++ + +G L L +LDLS+N+LT +P E+ L
Sbjct: 98 LTTLPKEIG-YLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKR 156
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L N + T+ I
Sbjct: 157 LQELYLRNNQLTTLPKGI 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L + LP I ++ L EL+LS NQLT LP K L L L N
Sbjct: 85 LQKLRYLYLSDNQLTT--LPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L +L L L+NN+++ + +G L L LDLS N+LT +P E+ +L
Sbjct: 143 QLTTLPNEIEF-LKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLK 201
Query: 120 HLKSLFLGGNPI 131
L+ LFL P+
Sbjct: 202 KLEELFLDDIPV 213
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L +L L+L N++ + + L L L LSDN+LT +P E+ L L+ L L N +
Sbjct: 62 LKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQL 121
Query: 132 KTVRNDILQ 140
T+ +I Q
Sbjct: 122 TTLPKEIGQ 130
>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N + TV +++
Sbjct: 178 LKSLKNLDLNHNELTTVSKEVM 199
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 LTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DIRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 379
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + LP I +++L L+L N+LT+LP +NL L LGFN
Sbjct: 70 LQNLQKLYLNYNQLTT--LPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L +LNL NK++ + +G L NL IL+ N+LT P E+ L
Sbjct: 128 RLTILP-DEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+R +++Q
Sbjct: 187 KLQELNLGFNRLTTLREEVVQ 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +++L LN NQLT P + L L LGFN
Sbjct: 139 LQNLQVLNLDLNKLTI--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L +L+L +N ++ + +G L L L L N+LT +P E+ L
Sbjct: 197 RLTTLREE-VVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 255
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+LG NP++T+ +I Q K
Sbjct: 256 KLQELYLGNNPLRTLPKEIEQLQK 279
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L LP I +++L LNL +N+LT+LP +NL L L N
Sbjct: 93 LQNLQVLDLYSNELTI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN 150
Query: 60 K-------INNMENDYFL---------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
K I ++N L L KL LNL N+++ + V L N
Sbjct: 151 KLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQN 210
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
L ILDL N LT +P E+ L L+ L+L GN + T+ +I Q K
Sbjct: 211 LQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKK 256
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N L + LP I + L +L L NQLT LP K L L LG N
Sbjct: 208 LQNLQILDLISNPLTT--LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL L L+ N+I+ +G L NL L+L N+LT +P E+ L
Sbjct: 266 PLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + T+ ++ Q K
Sbjct: 325 NLQELNLEFNQLATLPKEVGQLQK 348
>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVM 199
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 26/153 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L L N+LV+ LP I ++L +LNL N+LT+LP +NL L L
Sbjct: 108 QLQNLQELSLHSNELVN--LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
NK+ ++ N+ F T++K L L+L++NK+ + + L
Sbjct: 166 NKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLK 225
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+L +L L+ N+LT +P E+ L +LK+L LG N
Sbjct: 226 SLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|395226193|ref|ZP_10404687.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
gi|394445591|gb|EJF06485.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
Length = 294
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
+L L+L+ N+ VSD + ++ +L EL+L+ NQ++ + + NL L L NKI++
Sbjct: 111 NLTYLNLNTNQ-VSD-ISALKNLTNLKELDLTKNQVSDISSLKNLVNLEELYLWENKISD 168
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ LT L L+L+ NKI+ + +G+ INL L+L N L+++P E+ +L L+S
Sbjct: 169 I--SALKNLTNLKELDLRKNKINFIPKWIGNFINLTYLNLQLNNLSEIPTEIENLTKLES 226
Query: 124 LFLGGNPIKTVRNDI 138
L LGGN + + N I
Sbjct: 227 LMLGGNKLTKIPNWI 241
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++LK LDL+ N+ VSD + ++ +L EL L N+++ + + NL L L NKI
Sbjct: 131 LTNLKELDLTKNQ-VSD-ISSLKNLVNLEELYLWENKISDISALKNLTNLKELDLRKNKI 188
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N + + L+ LNL+ N +SE+ + + +L L L L N+LT +P + +L +L
Sbjct: 189 NFIP-KWIGNFINLTYLNLQLNNLSEIPTEIENLTKLESLMLGGNKLTKIPNWIGNLTNL 247
Query: 122 KSLFLGGNPIKTVRNDI 138
L+ +K+V ++I
Sbjct: 248 TELYWWEENLKSVSSNI 264
>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
Length = 614
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++LKTL L+ N L S DSL ++R L L+L +N+L+ +P V LT L L F
Sbjct: 178 LANLKTLALNENSLTSLPDSLQ---NLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRF 234
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L+ L++L+L+ NKI E+ + +G L+NL LDLS N L +P + +
Sbjct: 235 NRIR-IVGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNC 293
Query: 119 FHLKSLFLGGN 129
+L +L L N
Sbjct: 294 VNLTALDLQHN 304
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
+++ +++L HN++ +F + LT+LN+ N LT LP+ + L G N +
Sbjct: 388 TNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSL 447
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +D L L +L L NN + + + +G+L L +LDL +N L +P E+ L L
Sbjct: 448 TKLPDDIH-CLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDL 506
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + ++ I
Sbjct: 507 QKLILQSNQLNSLPRTI 523
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
+H+ ++ N + L + +LT + LS N P + N+T + L N+
Sbjct: 340 THMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQ 399
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ ++ F L+ LN+K N ++ + ++G + L+ N LT +P ++ L +
Sbjct: 400 IDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQN 459
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+ L L N +K + N I K + ++ +RL+
Sbjct: 460 LEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLE 494
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 27 RSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
++ L+LS + +T++P DC +L L NKI+++ + L L L L N +
Sbjct: 133 ENIQRLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIG-CLANLKTLALNENSL 191
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + ++ +L +L +LDL N+L+++P + L L +L+L N I+ V +++
Sbjct: 192 TSLPDSLQNLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRIVGDNL 244
>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
Length = 644
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 232 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 289 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIG 344
Query: 120 HLKSLF 125
+LKSL
Sbjct: 345 NLKSLV 350
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 422 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 479
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 480 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQR 538
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 539 LILQTNQITMLPRSI 553
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 389 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 448
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 449 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 507
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 164 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 222
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 223 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 276
>gi|312374534|gb|EFR22074.1| hypothetical protein AND_15808 [Anopheles darlingi]
Length = 1542
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L L+L HN+L +F + SL LNL +N + ++ D KNL L L N++
Sbjct: 436 LVVLNLGHNQLSKVDQHVFKGLYSLQILNLEHNAIELIADGAFGDLKNLHALFLSHNRLR 495
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSLFHL 121
+E +F L L L L++N+I+ + +L +L L L+DN L ++P + SL L
Sbjct: 496 QVEPYHFSELYVLHQLILESNQIAYIHERAFENLTHLHDLSLNDNRLEEIPSGMKSLKFL 555
Query: 122 KSLFLGGNPIKTVRN 136
+SL LG N I + N
Sbjct: 556 QSLDLGKNQIAEINN 570
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTE------------------------LNLSYN 37
L L+TL+L+ NKL + + LF+ R + + L+LS+N
Sbjct: 359 LGTLETLNLADNKLTALTPELFVSSRKIRQVYLQNNSLSVLAPGVFEGLDRLETLDLSHN 418
Query: 38 QLTMLPVCTDC----KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV- 92
QLT + V D L L LG N+++ ++ F L L +LNL++N I ++
Sbjct: 419 QLTSVWVKRDTFAGQVRLVVLNLGHNQLSKVDQHVFKGLYSLQILNLEHNAIELIADGAF 478
Query: 93 GDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQD 141
GDL NL L LS N L V P S L+ L L L N I + ++
Sbjct: 479 GDLKNLHALFLSHNRLRQVEPYHFSELYVLHQLILESNQIAYIHERAFEN 528
Score = 37.7 bits (86), Expect = 5.0, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGF 58
L+HL L L+ N+L + +P + ++ L L+L NQ+ + + + L L L
Sbjct: 529 LTHLHDLSLNDNRL--EEIPSGMKSLKFLQSLDLGKNQIAEINNASFEGLEELMGLRLVD 586
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELS 116
N+I + D F L+ + +LNL +N+I + S L + L +NEL ++ +S
Sbjct: 587 NQIREISRDTFFALSTIHVLNLASNRIRHIDQSAFSSNPTLRAIRLDNNELEELYLNIS 645
>gi|126305357|ref|XP_001364560.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
1-like [Monodelphis domestica]
Length = 525
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 91/157 (57%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ L++L L L N++ V L +
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLVSLHSLCLRRNKVAIVVNSLDWV 255
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L+ L L GN I+ + + + H+++ +LD
Sbjct: 256 WRLEKLDLSGNEIEYMEPHAFE----AVPHLESLQLD 288
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ++ L T NL + L +N
Sbjct: 88 LMQLTWLYLDHNHICSVEGDAFQKLRRVKELTLSSNQISQLANTTFRPMPNLRSVDLSYN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 148 NLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 207
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 208 LFKLTELHLEHNDLVKV 224
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 25 DMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
++ + L+L YN L+ L T LT L L N I ++E D F L ++ L L +
Sbjct: 63 NLSGMMGLSLRYNSLSELRDGQFTGLMQLTWLYLDHNHICSVEGDAFQKLRRVKELTLSS 122
Query: 83 NKISEVS-SNVGDLINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQ 140
N+IS+++ + + NL +DLS N L + +L L L +L + N IK V I Q
Sbjct: 123 NQISQLANTTFRPMPNLRSVDLSYNNLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQ 182
Query: 141 DSKRI 145
D + +
Sbjct: 183 DCRSL 187
>gi|119926388|dbj|BAF43233.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 242
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
+TL L N++ L +F + LT+L+LS+NQ T LP V NL L L N++ +
Sbjct: 42 QTLHLYRNQITKLELGVFDSLAQLTQLDLSHNQFTALPARVFDRLVNLQQLWLNNNQLTS 101
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSLFHLK 122
+ F LT+L++ NL++N++ V+ V + L++L L L DN+ T++P + L L
Sbjct: 102 LPAGVFDKLTQLTVFNLRHNQLQFVTVGVFERLVSLRELYLGDNKFTELPAGVGKLTTLT 161
Query: 123 SLFLGGNPIKTVRNDILQD-SKRIISHIKTSRLDYHCQNV 161
L L N +K++ + S +++ + D C+++
Sbjct: 162 HLGLDLNQLKSIPHGAFDRLSSLTLAYFFGNPWDCECRDI 201
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L LDLSHN+ + +F + +L +L L+ NQLT LP V LT L N
Sbjct: 62 LAQLTQLDLSHNQFTALPARVFDRLVNLQQLWLNNNQLTSLPAGVFDKLTQLTVFNLRHN 121
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP-CELSSL 118
++ + F L L L L +NK +E+ + VG L L L L N+L +P L
Sbjct: 122 QLQFVTVGVFERLVSLRELYLGDNKFTELPAGVGKLTTLTHLGLDLNQLKSIPHGAFDRL 181
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISH 148
L + GNP DI+ + H
Sbjct: 182 SSLTLAYFFGNPWDCECRDIMYLRNWVABH 211
>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNHNEFTTVSKEVM 199
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
KNL L LG N+ + + + L L LNL NNK++ + +G L NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 107 ELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
EL ++P E+ +L+ L L N + + +I Q
Sbjct: 121 ELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 664
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ LDL N+L + LP I+ ++ L +L L N+L LP + +NL L L N
Sbjct: 282 LQKLQELDLGINQLTT--LPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNN 339
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L+NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 340 QLTTLPKEIG-KLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQ 398
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
HL+ L L N + T+ +I + + +++ RLDY+
Sbjct: 399 HLQELHLENNQLTTLPKEIGK-----LQNLQELRLDYN 431
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS N+L + LP I +++L EL L NQLT LP + +NL L L N
Sbjct: 512 LQNLQLLYLSDNQLTT--LPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHN 569
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N+++ + +G L NL +L L +N+LT +P E+ L
Sbjct: 570 RLTTLPKEIG-NLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQ 628
Query: 120 HLKSLFLGGNP 130
+LK L L GNP
Sbjct: 629 NLKELDLVGNP 639
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFI------DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
++ LDL + + + PL+ +++L +L+LS NQLT+LP +NL L L
Sbjct: 140 IQYLDLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLT 199
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ N+ + L L L+L N+++ + +G L NL IL+L N+LT +P E+ +
Sbjct: 200 RNRLANLPEEIG-KLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGN 258
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L L+ L+LG N T+ I
Sbjct: 259 LQKLQELYLGDNQFATLPKAI 279
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L LP I +++L +LNL+ N+L LP +NL L L N
Sbjct: 167 LQNLRDLDLSSNQLTI--LPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L +LNL N+++ + +G+L L L L DN+ +P + L
Sbjct: 225 RLANLPEEIG-KLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQ 283
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD------YHCQNVDGGGMSSQESTS 173
L+ L LG N + T+ +I + K ++ ++RL QN+ G+++ + T+
Sbjct: 284 KLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTT 343
Query: 174 ---EIN----IDKYKLDRTKTLTLCKVINIPESVYMRGMSSQECT 211
EI ++ L+ + TL K I +++ G+S+ + T
Sbjct: 344 LPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLT 388
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L HL+ L L +N+L + LP I +++L EL L YN+LT LP + + L L N
Sbjct: 397 LQHLQELHLENNQLTT--LPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGN 454
Query: 60 KINNMENDYFLTLTKLSLLNL-----------------------KNNKISEVSSNVGDLI 96
+ + + + L L LNL +N+++ + +G L
Sbjct: 455 QFTTVPEEIW-NLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 513
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL +L LSDN+LT +P E+ L +L+ L+L N + T+ +I
Sbjct: 514 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEI 555
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L L LS NQLT LP +NL L L N++ + + L L +LNL +N+
Sbjct: 512 LQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIG-NLQNLQVLNLNHNR 570
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDS 142
++ + +G+L NL +L+L+ N LT +P E+ L +L+ L L N + T+ +I LQ+
Sbjct: 571 LTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNL 630
Query: 143 KRI 145
K +
Sbjct: 631 KEL 633
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I+ +++L L L+ NQLT LP + L L L N
Sbjct: 305 LQKLQQLYLYSNRLAN--LPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN 362
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L +L L L +N+LT +P E+ L
Sbjct: 363 QLTTLPKEIG-KLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQ 421
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRIIS 147
+L+ L L N + T+ +I LQ K++ S
Sbjct: 422 NLQELRLDYNRLTTLPEEIEKLQKLKKLYS 451
>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 511
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 28/163 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP----------------- 43
L L+ L+L HN+L + LP ID +++L +LNLS N+L LP
Sbjct: 313 LQELEWLNLEHNQLAA--LPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHA 370
Query: 44 -------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+ L L L N++ + + + L KL L LKNNK+ + + L
Sbjct: 371 HLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIW-KLRKLEWLYLKNNKLGSLPKEIDQLQ 429
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
NL LDLS+N+L +P E+ L L+ L L GNP T +I+
Sbjct: 430 NLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEIV 472
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LD+S+N+LV+ LP I +++L L L NQLT+LP +NL L+L N
Sbjct: 221 LQNLEDLDVSNNQLVT--LPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNN 278
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL LNL NN++ + +G L L L+L N+L +P E+ L
Sbjct: 279 QLTTLPQEIG-TLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQ 337
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N +KT+ I
Sbjct: 338 NLEDLNLSNNRLKTLPKGI 356
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 28/147 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L L +N+L +SLP I +R L LNL NQL +L +
Sbjct: 83 LQKLEWLSLKNNRL--ESLPNKIGKLRKLEHLNLENNQLAVL---------------VQE 125
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I TL KL L+L+NN+++ + +G L L LDLSDN+L +P E+ L
Sbjct: 126 IG--------TLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLES 177
Query: 121 LKSLFLGGNPIKTVRNDI--LQDSKRI 145
L+ L L N +KT+ +I LQ KR+
Sbjct: 178 LQYLSLVNNRLKTLPKEIWKLQKLKRL 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L+LS+N+L +LP I ++ L LNL +NQL LP D +
Sbjct: 290 LQKLQYLNLSNNQL--RTLPQEIGTLQELEWLNLEHNQLAALPQEID------------Q 335
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ N+E+ LNL NN++ + + L L L L LT +P E+ +L
Sbjct: 336 LQNLED-----------LNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQK 384
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
L+ LFL N +KT+ +I + K ++K ++L + +D
Sbjct: 385 LQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEID 426
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L L +N+L LP I ++ L +L+LS NQL LP ++L +L L N
Sbjct: 129 LQKLEWLSLENNQLTV--LPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNN 186
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L KL L L +N+ + + L NL LD+S+N+L +P E+ L
Sbjct: 187 RLKTLPKEIW-KLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQ 245
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK L+L N + + +I Q
Sbjct: 246 NLKWLYLDDNQLTVLPQEIGQ 266
>gi|66799847|ref|XP_628849.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
AX4]
gi|122056492|sp|Q54AX5.1|LRRA_DICDI RecName: Full=Leucine-rich repeat protein lrrA
gi|7673365|gb|AAF66828.1| leucine-rich-repeat protein lrrA [Dictyostelium discoideum]
gi|60462184|gb|EAL60413.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
AX4]
Length = 510
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID------------------------MRSLTELNLSYN 37
L +L+TLDL NKL D++P I M++L E S N
Sbjct: 315 LINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFEASNN 374
Query: 38 QLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
QL +P + LT + L NK+ ++ F L++L + +LK+N+I+E+ + + L
Sbjct: 375 QLQAIPTEIGELSGLTKINLSGNKLTSIPAS-FGNLSELQICDLKSNEIAELPTTLDGLK 433
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI-LQDSKRIISHIKTSRLD 155
+ +DLS N LT++P E L L L +G NP+ N I ++ ++ II +K + +
Sbjct: 434 SCTKIDLSHNMLTELPWEFGDLIGLTILDVGHNPLTIPPNPIVMKGTESIIQWLKKNEKE 493
Query: 156 YHCQNVDGGGMSS 168
V G G+
Sbjct: 494 GRKGKVSGLGIQQ 506
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 24/153 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSL-PLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHL----- 54
L+ LK L LS+NKL + P +++LT L+LS NQL LPV ++C+ L +L
Sbjct: 82 LATLKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQLDDLPVEISNCEALEYLDISDN 141
Query: 55 -----LLGFNKINNME------------NDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
L F K+ N++ KL LN+ NN+++ + + + L
Sbjct: 142 QLQSFPLEFGKLYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLAFLPNQICLLGL 201
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L+ L++ N+L +P ELSS+ L +L L NP
Sbjct: 202 LSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNP 234
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 29/143 (20%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQ-LTMLPVCTDCKNL------- 51
+L L TL++ NKL LP + M SLT L+L N L +P ++ + L
Sbjct: 198 LLGLLSTLNVGFNKL--QQLPEELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRN 255
Query: 52 ---THLLLGFNKINNM------------ENDY-FLTLTKLSLLNLKNNKISEVSSNVGDL 95
THL LG ++ + E Y TL L L+L N + V VG+L
Sbjct: 256 LQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREVGNL 315
Query: 96 INLAILDLSDNELT--DVPCELS 116
INL LDL N+LT ++P E+
Sbjct: 316 INLQTLDLRQNKLTIDNIPSEIG 338
>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 1408
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L + LS+N+ +S+ + +LT+L+LSYNQ+T +P NLT ++L NK
Sbjct: 401 LINLTQIILSYNR-ISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNK 459
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L L L N+I+E+ + L NL L+LSDN++ +P L+ L +
Sbjct: 460 ITEIP-EALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSN 518
Query: 121 LKSLFLGGNPIKTV 134
L L L N I +
Sbjct: 519 LTQLDLNRNKITEI 532
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ L +S NK +++ + + +L +L L NQ+T +P V NLT L L +N+
Sbjct: 217 LINLRELQVSSNK-ITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQ 275
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L L+ + L NNKI+E+ + LINL LDLS N++T +P L+ L +
Sbjct: 276 ITKI-SEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTN 334
Query: 121 LKSLFLGGNPIKTV 134
L L L N I +
Sbjct: 335 LTQLILYSNQITEI 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L LDLS+N++ + ++L I+ LT++ L N++T +P NL L L +
Sbjct: 424 LTNLTQLDLSYNQITKIPEALAKLIN---LTQIILHSNKITEIPEALAKLTNLRQLYLSY 480
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L+ LNL +N+I ++ + L NL LDL+ N++T++P L+ L
Sbjct: 481 NRITEIP-EALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKL 539
Query: 119 FHLKSLFLGGNPIKTV 134
+L L+L N I +
Sbjct: 540 TNLTQLYLRNNRITEI 555
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L LDLS+N++ +S++L I+ LT++ L N++T +P NLT L L +
Sbjct: 263 LTNLTQLDLSYNQITKISEALAKLIN---LTQIILHNNKITEIPDALAKLINLTQLDLSY 319
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L+ L L +N+I+E+ + L NL LDLS N++T +P L+ L
Sbjct: 320 NQITKIP-EALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKL 378
Query: 119 FHLKSLFLGGNPIKTV 134
+L L L N I +
Sbjct: 379 TNLTQLILYSNRISEI 394
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L++L L+L+ ++ +++ + + +LT+LNL+ NQ+ +P NLT L+L N+
Sbjct: 586 LTNLTQLNLTSSQ-ITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQ 644
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + LT L+ LNL +N+I+++ + L NL L LS N++T++P ++ L +
Sbjct: 645 ITEIP-EAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTN 703
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L L N I + + I
Sbjct: 704 LTQLILTSNQITEIPDAI 721
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L LDLS+N++ +P + +LT+L L NQ+T +P V NLT L L +N
Sbjct: 309 LINLTQLDLSYNQITK--IPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYN 366
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L L +N+ISE+ + LINL + LS N ++++P L+ L
Sbjct: 367 QITKIP-EALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLT 425
Query: 120 HLKSLFLGGNPIKTV 134
+L L L N I +
Sbjct: 426 NLTQLDLSYNQITKI 440
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L L+ N++ +P I + +LT+LNL+ NQ+T +P NLT L+L +N
Sbjct: 632 LTNLTQLILTSNQITE--IPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYN 689
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+I + + LT L+ L L +N+I+E+ + L NL LDLS N ++++P E+
Sbjct: 690 QITEIP-EAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEI 744
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L+L+ N++ +P I + +LT+L L+ NQ+T +P NLT L L N
Sbjct: 609 LTNLTQLNLTSNQIAE--IPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSN 666
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L+ L L N+I+E+ + L NL L L+ N++T++P ++ L
Sbjct: 667 QITKIP-EAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLT 725
Query: 120 HLKSLFLGGNPIKTVRNDIL--QDSKRIISHIK 150
+L L L N I + +IL +D K I+++++
Sbjct: 726 NLTQLDLSYNRISEIPLEILDSKDPKEILNYLR 758
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN- 59
LS+L LDL+ NK +++ + +LT+L L N++T +P NLT L LG N
Sbjct: 516 LSNLTQLDLNRNK-ITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNY 574
Query: 60 ----------KINNMEN------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ N+ + LT L+ LNL +N+I+E+ + L N
Sbjct: 575 NISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTN 634
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L+ N++T++P ++ L +L L L N I + I
Sbjct: 635 LTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAI 675
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
L + +L EL++S N++T +P NL L + N+I + + L+ L L++
Sbjct: 144 LIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIP-EAIANLSNLRELHV 202
Query: 81 KNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+N+I+E+ + LINL L +S N++T++P ++ L +L+ L+L N I +
Sbjct: 203 SSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEI 256
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 19 SLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+LPL + + +L +L++S N L +P V T +L L+L ++ + + L+ L+
Sbjct: 71 TLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIP-EAIANLSNLT 129
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L +N IS++ + L NL L +S N++T++P ++ L +L+ L + N I +
Sbjct: 130 QLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPE 189
Query: 137 DI 138
I
Sbjct: 190 AI 191
>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 423
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVM 199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+L+ L+L +NKL LP I +++L EL+L N+L LP K+L +L L N+
Sbjct: 133 KNLQKLNLDNNKLTV--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNE 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L+L++NK+ + + L +L +L L+ N+LT +P E+ L +
Sbjct: 191 FTTVSKEVML-LETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQN 249
Query: 121 LKSLFLGGN 129
LK+L LG N
Sbjct: 250 LKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
KNL L LG N+ + + + L L LNL NNK++ + +G L NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 107 ELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
EL ++P E+ +L+ L L N + + +I Q
Sbjct: 121 ELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 515
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +NKL + P I +++ L L L+ NQLT +P + +NL L L N
Sbjct: 341 LQNLQGLHLGNNKLTA--FPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSN 398
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G+L NL LDL+ N LT +P E+ +L
Sbjct: 399 QLTTIPKE-IENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQ 457
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+SL L NP+ + +I + + H+K RL+
Sbjct: 458 SLESLDLSNNPLTSFPEEIGK-----LQHLKRLRLE 488
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L+ N+L + +P I ++++L ELNLS NQLT +P + +NL L L N
Sbjct: 364 LQKLKWLGLNKNQLTT--IPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNN 421
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +N+++ + +G+L +L LDLS+N LT P E+ L
Sbjct: 422 QLTALPKEIG-NLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQ 480
Query: 120 HLKSLFLGGNP 130
HLK L L P
Sbjct: 481 HLKRLRLENIP 491
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I ++++L L+L NQLT LP +NL L L N
Sbjct: 180 LQNLQELDLEGNQLAT--LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN 237
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +L+L NN+++ + VG L NL + S N+LT +P E+ +L
Sbjct: 238 RLTTFPKE-IEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQ 296
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + + +I
Sbjct: 297 NLQELYLAHNQLTALPKEI 315
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLS N+L++ LP I ++ L +LNL+ N+L LP +
Sbjct: 134 LQNLRDLDLSSNQLMT--LPKEIGKLQKLQKLNLTRNRLANLP---------------EE 176
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L L+L+ N+++ + +G+L NL LDL N+LT +P E+ L +
Sbjct: 177 IGKLQN--------LQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQN 228
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK L+L N + T +I
Sbjct: 229 LKKLYLYNNRLTTFPKEI 246
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L KL LNL N+++ + +G L NL LDL N+L +P E+ +L +L++L L GN +
Sbjct: 157 LQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQL 216
Query: 132 KTVRNDI--LQDSKRI 145
T+ +I LQ+ K++
Sbjct: 217 TTLPKEIGKLQNLKKL 232
>gi|395508854|ref|XP_003758723.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 1
[Sarcophilus harrisii]
Length = 498
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 91/157 (57%), Gaps = 7/157 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 106 MPNLRSVDLSYNNLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQDCRSLKFLDIGYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N + +V+ ++ L++L L L N++ V L +
Sbjct: 166 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLVSLHSLCLRRNKVAIVVNSLDWV 225
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L+ L L GN I+ + + + H+++ +LD
Sbjct: 226 WRLEKLDLSGNEIEYMEPHAFE----AVPHLESLQLD 258
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L L L HN + S F +R + EL LS NQ++ L T NL + L +N
Sbjct: 58 LMQLTWLYLDHNHICSVEGDAFQKLRRVKELTLSSNQISQLANTTFRPMPNLRSVDLSYN 117
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+ + D F L KL+ L+++ N I V + D +L LD+ N+L + +
Sbjct: 118 NLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAG 177
Query: 118 LFHLKSLFLGGNPIKTV 134
LF L L L N + V
Sbjct: 178 LFKLTELHLEHNDLVKV 194
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 25 DMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
++ + L+L YN L+ L T LT L L N I ++E D F L ++ L L +
Sbjct: 33 NLSGMMGLSLRYNSLSELRDGQFTGLMQLTWLYLDHNHICSVEGDAFQKLRRVKELTLSS 92
Query: 83 NKISEVS-SNVGDLINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQ 140
N+IS+++ + + NL +DLS N L + +L L L +L + N IK V I Q
Sbjct: 93 NQISQLANTTFRPMPNLRSVDLSYNNLQALAPDLFHGLRKLTTLHMRANAIKFVPVRIFQ 152
Query: 141 DSKRI 145
D + +
Sbjct: 153 DCRSL 157
>gi|47222796|emb|CAG01763.1| unnamed protein product [Tetraodon nigroviridis]
Length = 553
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ LK LDLS N L LP I +R L LN+S N L +LP + C L+ + + N
Sbjct: 91 LTSLKVLDLSVNDL--KRLPEGITRLRELNTLNVSCNTLEVLPGGLSRCTKLSAINISKN 148
Query: 60 KINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+I +D+F L LS + +N I +S++V L L +LDLS+N+L+++P ELS
Sbjct: 149 RITGFPSDFFSEDLDLLSSVVASDNSIDRLSADVHRLAALKVLDLSNNKLSEIPSELSDC 208
Query: 119 FHLKSLFLGGNPIKTVR 135
LK + GN + R
Sbjct: 209 SKLKEINFRGNKLSDKR 225
>gi|359683238|ref|ZP_09253239.1| hypothetical protein Lsan2_00495 [Leptospira santarosai str.
2000030832]
Length = 245
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDL+ N+L +LP I ++++L L+L YNQLT LP +NL L L N
Sbjct: 94 LKNLQTLDLAENQL--KTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYEN 151
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+++ + +G L NL L L +N+LT +P E+ +L
Sbjct: 152 QLKTLPKEIG-NLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYENQLTKLPNEIVNLK 210
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
+L++L + GNP + D + K+++ ++K +
Sbjct: 211 NLQTLDVSGNPALIPQKDKI---KKLLPNVKIT 240
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS+ +L +P + ++++L L+L+ NQL LP + +NL L LG+N
Sbjct: 71 LQNLQVLSLSYGQLTI--IPKEVGNLKNLQTLDLAENQLKTLPKEIGNLQNLQWLDLGYN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G+L NL LDL N+LT +P E+ L
Sbjct: 129 QLTTLPEEIG-KLQNLQELHLYENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQ 187
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+L+ L L N + + N+I+
Sbjct: 188 NLQELHLYENQLTKLPNEIV 207
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 26/135 (19%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L L HN+L + P I +++L L+LSY QLT++P ++ N
Sbjct: 51 VRVLSLVHNQLTT--FPKEIGQLQNLQVLSLSYGQLTIIP---------------KEVGN 93
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L L+L N++ + +G+L NL LDL N+LT +P E+ L +L+
Sbjct: 94 LKN--------LQTLDLAENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQNLQE 145
Query: 124 LFLGGNPIKTVRNDI 138
L L N +KT+ +I
Sbjct: 146 LHLYENQLKTLPKEI 160
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + +L+L +N+++ +G L NL +L LS +LT +P E+ +L +L++L L N +K
Sbjct: 49 TDVRVLSLVHNQLTTFPKEIGQLQNLQVLSLSYGQLTIIPKEVGNLKNLQTLDLAENQLK 108
Query: 133 TVRNDI 138
T+ +I
Sbjct: 109 TLPKEI 114
>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 390
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L + LP+ I ++++L LNL NQLT LP +NL L LG N
Sbjct: 220 LQNLQKLVLNRNQLTA--LPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNN 277
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL L L N+++ + +G+L NL L+LS N+LT +P E+ +L
Sbjct: 278 KLTALPIEIG-NLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQ 336
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L++L L N + T+ +I LQ+ +R+
Sbjct: 337 KLETLDLYNNQLTTLPKEIGNLQNLQRL 364
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL NK+ LP I ++SL ELNLS+NQL LP + ++L L LG N
Sbjct: 82 LQYLQKLDLGFNKITV--LPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L + N+++ + +G+L NL L L++N+LT +P E+ +L
Sbjct: 140 QFTALPEEIG-KLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQ 198
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
+L+ L L N + + +I LQ+ ++++
Sbjct: 199 NLQKLVLNRNQLTALPIEIGNLQNLQKLV 227
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++ L L+ KL + LP I +++L ELNL N+LT LP + + L L LGFNK
Sbjct: 37 TQVRVLYLNGKKLTA--LPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNK 94
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + +G L +L L+LS N+L +P E+ +L H
Sbjct: 95 I------------------------TVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQH 130
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK LFLG N + +I
Sbjct: 131 LKRLFLGLNQFTALPEEI 148
>gi|81175515|gb|ABB59094.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 323
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L +NKL S F + LT LNL+YN+L LP V +NL L L N++ ++
Sbjct: 64 LKLDYNKLSSLPHTAFHGLNKLTILNLNYNELQTLPAGVFDQLRNLETLWLSQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP-CELSSLFHLKSL 124
F LTKLS+L L +NK+ +V L L L LS+N+L VP L ++K L
Sbjct: 124 QGIFDKLTKLSILQLSDNKLQSPRRSVDKLTELKTLTLSNNQLKRVPEGAFDKLQNIKDL 183
Query: 125 FLGGNPIKTVRNDIL 139
L NP DIL
Sbjct: 184 QLTNNPWDCSCKDIL 198
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 32 LNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
++ S LT +P + TD NL L +NK++++ + F L KL++LNL N++ +
Sbjct: 43 VDCSGKMLTAIPSNIPTDTDNLK---LDYNKLSSLPHTAFHGLNKLTILNLNYNELQTLP 99
Query: 90 SNVGD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDI 138
+ V D L NL L LS N+L +P + L L L L N +++ R +
Sbjct: 100 AGVFDQLRNLETLWLSQNQLKSLPQGIFDKLTKLSILQLSDNKLQSPRRSV 150
>gi|418706359|ref|ZP_13267207.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410763984|gb|EKR34703.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 246
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
++ LDL+ L + L +R+L L LS+NQ T LP +NL HL L N++
Sbjct: 55 VRQLDLAAKGLTT-LLKEIGKLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTT 113
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + KL L L NN+++ + + L NL +L LS N LT +P E++ L L+
Sbjct: 114 LPEE-IAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQR 172
Query: 124 LFLGGNPIKTVRNDILQDSK 143
L++ GN T +I Q K
Sbjct: 173 LYVYGNRFTTFPEEITQLQK 192
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ N+L + LP I + L L L NQL LP T +NL L L N
Sbjct: 98 LQNLQHLDLNDNRLTT--LPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGN 155
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L + N+ + + L L LDL N+LT +P E+ L
Sbjct: 156 RLTTLPEE-IAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGQLQ 214
Query: 120 HLKSLFLGGNPI 131
+L++L L GNPI
Sbjct: 215 NLQTLILKGNPI 226
>gi|334116578|ref|ZP_08490670.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333461398|gb|EGK90003.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 576
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L++L TL+ +NK+ S + +LT LNLSYNQ+T + NLT L L +N+
Sbjct: 73 WLTNLTTLNFENNKITDISS--LGSLTNLTRLNLSYNQITDISFLGSLTNLTTLDLSYNR 130
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ + +LT L+ LNL N I+++SS +G L NL LDL N++TD+ L SL +
Sbjct: 131 IIDISS--LGSLTNLTRLNLNINTITDISS-LGSLTNLTRLDLLSNQITDL-SSLGSLTN 186
Query: 121 LKSLFLGGNPIKTV 134
L L L NPI +
Sbjct: 187 LTRLDLSSNPITDI 200
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+ S+TEL LSY+ +T + NLT L NKI ++ + +LT L+ LNL N+I
Sbjct: 52 LSSMTELALSYDHITDISFLRWLTNLTTLNFENNKITDISS--LGSLTNLTRLNLSYNQI 109
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+++S +G L NL LDLS N + D+ L SL +L L L N I +
Sbjct: 110 TDISF-LGSLTNLTTLDLSYNRIIDI-SSLGSLTNLTRLNLNINTITDI 156
>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
Length = 546
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+TL LS N L S LP +R L L+L +N+L +P V +LT L L FN
Sbjct: 107 LVNLQTLALSENSLTS--LPDTLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + D LT L++L+L+ NKI E+ + +G L L D S+N+L +P E+ +
Sbjct: 165 RIREV-GDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCV 223
Query: 120 HLKSL 124
L +L
Sbjct: 224 QLSTL 228
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
+++ HN++ +F R+LT+LN+ NQLT LP+ N+ L LG N+++ +
Sbjct: 323 AINMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVP 382
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+D L L +L L NN + + +G L L +LDL +N L +P E+ L L+ L
Sbjct: 383 DD-IQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPNEIGMLRELQKLV 441
Query: 126 LGGNPIKTVRNDI 138
N + ++ I
Sbjct: 442 AQSNQLSSLPRAI 454
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 30 TELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
T L+LS + +T+LP + + L HL+ L NK+ + + +L L L L N ++
Sbjct: 65 TRLDLSKSSITVLP--SSVRELGHLVEFYLYGNKLATLPGEVG-SLVNLQTLALSENSLT 121
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + L L +LDL N+L ++P + L L +LFL N I+ V ++I
Sbjct: 122 SLPDTLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIREVGDNI 173
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 54/204 (26%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLS--YNQLTMLPVC-TDCKNLT------- 52
L TLD+ HN+L+ +P I +++ LT L L YNQLT +P ++C N+T
Sbjct: 224 QLSTLDVQHNELI--DIPETIGNLKVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESN 281
Query: 53 -----------------------------------------HLLLGFNKINNMENDYFLT 71
+ + N+IN + F
Sbjct: 282 LVSQLPEGLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYAINMEHNQINKIPFGIFSR 341
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L+ LN+K+N+++ + ++G N+ L+L N+L+ VP ++ L L+ L L N +
Sbjct: 342 ARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLL 401
Query: 132 KTVRNDILQDSKRIISHIKTSRLD 155
+ + I +K + ++ +RLD
Sbjct: 402 RRLPPTIGSLAKLRVLDLEENRLD 425
>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 423
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++SL L+L +NQ+T LPV T +L L L NKI + + L L L L+L NN
Sbjct: 292 QLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKE-ILQLKNLEWLSLSNN 350
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
K++ + +G L L L+L +N+LT +P E+ L +L+ L L NPI ++ +
Sbjct: 351 KLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISP------KEKE 404
Query: 144 RIISHIKTSRLDYHCQNVDGGG 165
RI + +D+ +GGG
Sbjct: 405 RIRKLLPKCEIDF-----EGGG 421
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+ S ++ ++ L +LNL+ N+LT+LP +NL L L N
Sbjct: 62 QLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSN 120
Query: 60 KINNMEND--YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ + F L KL NL NNK++ + +G L NL L L N+L +P E+
Sbjct: 121 ELVNLPKEIGQFKNLQKL---NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L N TV +++
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVM 199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 26/153 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L L N+LV+ LP I ++L +LNL N+LT+LP +NL L L
Sbjct: 108 QLQNLQELSLHSNELVN--LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
NK+ ++ N+ F T++K L L+L++NK+ + + L
Sbjct: 166 NKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLK 225
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+L +L L+ N+LT +P E+ L +LK+L LG N
Sbjct: 226 SLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ LDL NKL ++P I ++SL L L+ NQLT LP +NL L LG
Sbjct: 200 LLETLENLDLRSNKL--KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGE 257
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L N ++ E VG L +L L L N++T +P E++ L
Sbjct: 258 NRFQIFPVEILELKNLLELNLYYN-QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL 316
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L L GN I + +ILQ
Sbjct: 317 PDLQELHLSGNKITILPKEILQ 338
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+R+L +LS+ L LP KNL L LG N+ + + + L L LNL NN
Sbjct: 42 DVRNL---DLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIW-QLKDLQKLNLNNN 97
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
K++ + +G L NL L L NEL ++P E+ +L+ L L N + + +I Q
Sbjct: 98 KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ 154
>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
harrisii]
Length = 638
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD + N L ++P M SL L L N+L LP C L L +G N+
Sbjct: 255 MKRLKHLDCTSNYL--QTVPSELASMESLELLYLRRNKLRFLPEFPSCLLLKELHVGENQ 312
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L + +L+L++NK+ + + L L LDL++N+++ +P L +L
Sbjct: 313 IEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPHTLGNLPR 372
Query: 121 LKSLFLGGNPIKTVRNDIL-QDSKRIISHIKT 151
L+ L L GNP++T+R ++L + ++ ++ ++++
Sbjct: 373 LQFLALEGNPLRTIRRELLNKGTQEVLKYLRS 404
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N L S LP I ++ +L +LN+S+N+L LP T +NL L L +
Sbjct: 139 LLPALTILDMHDNLLTS--LPCAIGELENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQY 196
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + F L KL L+L NN ++ + + L NL L+L+ N++ D+P E++ +
Sbjct: 197 NELTCVP-EGFGQLHKLEDLDLSNNHLTALPVSFSSLSNLMRLNLASNQMKDLPVEITRM 255
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L N ++TV +++
Sbjct: 256 KRLKHLDCTSNYLQTVPSEL 275
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+LT L++ NK+ ++ +D L L L++L++ +N ++ + +G+L NL L++S N+L
Sbjct: 119 DLTKLIISNNKLQSLSDDLRL-LPALTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLK 177
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTV 134
+P EL+ L +LK LFL N + V
Sbjct: 178 TLPQELTKLRNLKGLFLQYNELTCV 202
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK-NLTHLLLGFNKINNMEN 66
++L NKL S L + +++L L++ N LT LP + L + L FN+ +
Sbjct: 490 INLGFNKLSCVSAELGV-LQNLAHLDIRNNLLTSLPEEMEALIKLQTINLSFNRFKTFPS 548
Query: 67 DYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ + L + L NN++ V + + LA LDL +N+L +P EL + L++L
Sbjct: 549 VLY-RVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRALL 607
Query: 126 LGGNPIKTVRNDILQDSKRII 146
L GNP + R IL +
Sbjct: 608 LEGNPFRIPRAAILAKGTEAV 628
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ L + NNK+ +S ++ L L ILD+ DN LT +PC + L +L+ L + N +KT+
Sbjct: 120 LTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTL 179
Query: 135 RNDI 138
++
Sbjct: 180 PQEL 183
>gi|351705089|gb|EHB08008.1| Ras suppressor protein 1, partial [Heterocephalus glaber]
Length = 243
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+H+ L LSHNKL + P ++++L LNL NQ+ LP + + L HL LG N+
Sbjct: 5 LAHITQLVLSHNKLTTVP-PNVAELKNLEVLNLFNNQIEELPTQISSLQKLKHLNLGMNR 63
Query: 61 INNMENDY------------------------FLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+N + + F LT L L L +N + ++G L
Sbjct: 64 LNTLPRGFGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLT 123
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L IL L DN+L +P E+ L LK L + GN
Sbjct: 124 KLQILSLRDNDLISLPKEIGELTQLKELHIQGN 156
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
+ ++L ++ L L +NK++ V NV +L NL +L+L +N++ ++P ++SSL LK L LG
Sbjct: 1 FTVSLAHITQLVLSHNKLTTVPPNVAELKNLEVLNLFNNQIEELPTQISSLQKLKHLNLG 60
Query: 128 GNPIKTV 134
N + T+
Sbjct: 61 MNRLNTL 67
>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 371
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I +++L LNL NQL LP KNL L L N
Sbjct: 139 LQNLKVLFLNNNQLTT--LPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL NN++ + + L NL L LS+N+L +P E+ L
Sbjct: 197 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + T+ N+I Q
Sbjct: 256 KLQKLYLNANQLTTIPNEIAQ 276
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L ELNL NQLT +L KNL L L N++
Sbjct: 50 VRVLDLSEQKL--KALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+ +N+I+ +S +G L NL +L L++N+LT +P E+ L +L+
Sbjct: 108 TILKE-IEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
+L L N + T+ +I Q
Sbjct: 167 TLNLWNNQLITLPKEIAQ 184
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L +N+L++ LP I +++L EL LS NQL LP + L L L N
Sbjct: 208 LEKLQELNLWNNQLIT--LPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNAN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L N+ + G L NL L+L N+LT +P E+ L
Sbjct: 266 QLTTIPNE-IAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 324
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 325 NLQTLYLRNN 334
>gi|195166976|ref|XP_002024310.1| GL14883 [Drosophila persimilis]
gi|194107683|gb|EDW29726.1| GL14883 [Drosophila persimilis]
Length = 372
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQLT P T+ ++L +L +G NKI + D + + L +L+L N IS
Sbjct: 126 TLKELNLSGNQLTHFPEQVTELRHLKYLYVGGNKITAISKDIW-KMQSLHVLSLGGNLIS 184
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+V VG L +L L L DN + ++P ++ L +LKSL L N ++ + DI+
Sbjct: 185 DVPDAVGSLSHLQALVLCDNLVENLPMSIARLKNLKSLLLHKNRLRHLPKDIV 237
>gi|327274476|ref|XP_003222003.1| PREDICTED: ras suppressor protein 1-like [Anolis carolinensis]
Length = 277
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS++ L LSHNKL + P D+R+L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LSNITQLVLSHNKLTTVP-PNVADLRNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDY------------------------FLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+N++ + F LT L L L +N + ++G L
Sbjct: 98 LNSLPRGFGSLPALEVLDLTYNNLHENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLT 157
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L IL L DN+L +P E+ L LK L + GN
Sbjct: 158 KLQILSLRDNDLISLPKEIGELTQLKELHIQGN 190
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
TL+ ++ L L +NK++ V NV DL NL +L+ +N++ ++P ++SSL LK L LG
Sbjct: 36 LFTLSNITQLVLSHNKLTTVPPNVADLRNLEVLNFFNNQIEELPTQISSLQKLKHLNLGM 95
Query: 129 N 129
N
Sbjct: 96 N 96
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 20 LPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLL 78
+P + ++T+L LS+N+LT +P D +NL L N+I + +L KL L
Sbjct: 33 IPGLFTLSNITQLVLSHNKLTTVPPNVADLRNLEVLNFFNNQIEELPTQ-ISSLQKLKHL 91
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTD--VPCELSSLFHLKSLFLGGNPIKTVRN 136
NL N+++ + G L L +LDL+ N L + +P L L++L+L N + +
Sbjct: 92 NLGMNRLNSLPRGFGSLPALEVLDLTYNNLHENSLPGNFFYLTTLRALYLSDNDFEILPP 151
Query: 137 DI 138
DI
Sbjct: 152 DI 153
>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 448
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L LNLSYNQ+ LP + + L L L N
Sbjct: 185 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 243 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 302 NLQDLYLVSNQLTTIPKEIGQ 322
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + +P I +++L +L L NQLT +P +NL L LG N
Sbjct: 277 LQNLKVLFLNNNQLTT--IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 335 QLTILPKEIG-KLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 393
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 394 NLQELYLSNNQLITIPKEIGQ 414
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT +P +NL L L N
Sbjct: 254 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 312 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 371 NLQELYLSNNQLTTIPKEIGQ 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L+ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 93 LKNLQMLDLHSNQLII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 151 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N IKT+ +I
Sbjct: 210 KLQWLNLSYNQIKTLPQEI 228
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL +LP I +++L L+LS NQL +LP KNL L L N++
Sbjct: 50 VRVLILSEQKL--KALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLI 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+L++N+++ + +G L NL L LS+N+LT P E+ L L+
Sbjct: 108 ILPKE-IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQ 166
Query: 123 SLFLGGNPIKTVRNDI 138
L L N IKT+ +I
Sbjct: 167 WLNLSANQIKTIPKEI 182
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 300 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNN 357
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 358 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 416
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 417 NLQTLYLRNN 426
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ L L N + + +I
Sbjct: 55 LSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIR 114
Query: 140 Q 140
Q
Sbjct: 115 Q 115
>gi|384485460|gb|EIE77640.1| hypothetical protein RO3G_02344 [Rhizopus delemar RA 99-880]
Length = 513
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 7 TLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNM 64
++DLS+ L+ S + ++D +L +L LS NQ+T LP KNLT L + NKIN +
Sbjct: 92 SVDLSNKCLIKLSATIGYLD--NLNKLILSNNQMTELPKEVGYLKNLTVLNVSNNKINEL 149
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
D L+KL LN+ NK+ + S++G L L I+ ++N++T +P ELS L +L SL
Sbjct: 150 P-DTIAFLSKLKALNISENKLKTLPSSIGQLQKLVIIVANNNQITSLPTELSQLSNLVSL 208
Query: 125 FLGGNPIKTVRNDILQ 140
+ NP++T+ ++ +
Sbjct: 209 NVSFNPLRTLPAEVAK 224
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L+ L L NN+++E+ VG L NL +L++S+N++ ++P ++ L LK+L + N +
Sbjct: 110 LDNLNKLILSNNQMTELPKEVGYLKNLTVLNVSNNKINELPDTIAFLSKLKALNISENKL 169
Query: 132 KTVRNDILQDSKRII 146
KT+ + I Q K +I
Sbjct: 170 KTLPSSIGQLQKLVI 184
>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 427
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L LNLSYNQ+ LP + + L L L N
Sbjct: 164 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 222 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 280
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 281 NLQDLYLVSNQLTTIPKEIGQ 301
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 72 LKNLQMLDLSDNQLII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 130 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 188
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N IKT+ +I
Sbjct: 189 KLQWLNLSYNQIKTLPQEI 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L L+LS NQL +LP KNL L L N++
Sbjct: 29 VRVLDLSEQKL--KALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 86
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+L++N+++ + +G L NL L LS+N+LT P E+ L L+
Sbjct: 87 ILPKE-IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQ 145
Query: 123 SLFLGGNPIKTVRNDI 138
L L N IKT+ +I
Sbjct: 146 WLNLSANQIKTIPKEI 161
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + +P I +++L +L L NQLT +P +NL L LG N
Sbjct: 256 LQNLKVLFLNNNQLTT--IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 313
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 314 QLTILPKEIG-KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 373 NLQELYLSNNQLITIPKEIGQ 393
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT +P +NL L L N
Sbjct: 233 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 291 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 349
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 350 NLQELYLSNNQLTTIPKEIGQ 370
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 279 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN 336
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 337 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 395
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 396 NLQTLYLRNN 405
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+L+L K+ + +G L NL +LDLSDN+L +P E+ L +L+ L L N + +
Sbjct: 31 VLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPK 90
Query: 137 DILQ 140
+I Q
Sbjct: 91 EIRQ 94
>gi|326434950|gb|EGD80520.1| hypothetical protein PTSG_01111 [Salpingoeca sp. ATCC 50818]
Length = 1133
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Query: 5 LKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L LD++ N+LV LP +DM L LN S+N +T LP + ++LT L LG N++++
Sbjct: 41 LIELDVAENRLVQ--LPSQLLDMIELELLNCSHNIITHLPDFSSLQSLTELHLGRNQLSS 98
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN-LAILDLSDNELTDVPCELSSLFHLK 122
+ D + L +L++ +NKI E+ +++G+L + L L++S+N L +P + SL L+
Sbjct: 99 LPED--VCELPLEILDISSNKIHELPAHIGNLRDTLKELNISNNALRILPDAVCSLHSLR 156
Query: 123 SLFLGGNPIKTV 134
L + N + T+
Sbjct: 157 ELNIARNKLDTL 168
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VC----------------- 45
L+ L+ SHN + LP F ++SLTEL+L NQL+ LP VC
Sbjct: 64 LELLNCSHN--IITHLPDFSSLQSLTELHLGRNQLSSLPEDVCELPLEILDISSNKIHEL 121
Query: 46 -TDCKNLTHLLLGFNKINN---MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL 101
NL L N NN + D +L L LN+ NK+ + +G L L L
Sbjct: 122 PAHIGNLRDTLKELNISNNALRILPDAVCSLHSLRELNIARNKLDTLPEGLGSLRALVTL 181
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
D+S N ++ +P ++ L HL SL + NP+
Sbjct: 182 DMSSNAISVLPISMADLAHLTSLNVDSNPL 211
>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
FPW2026]
gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
FPW2026]
Length = 336
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 28/170 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------ 43
L +L+TL+L +N+L++ S + +++L EL L+YNQLT+LP
Sbjct: 142 LKNLQTLNLWNNQLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQ 200
Query: 44 ------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
KNL L LG+N+ + N+ L L +L L NN+++ +S +G L N
Sbjct: 201 LKTLSKEIGQLKNLKRLDLGYNQFKIIPNE-IEQLQNLQVLELNNNQLTTLSKEIGRLQN 259
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L L LS N+LT +P E+ L +L+ L L N +KT+ +I L++ KR+
Sbjct: 260 LQELYLSYNQLTILPNEIGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRL 309
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L EL L+YNQLT+LP KNL L L N++ + + L L LNL NN
Sbjct: 95 QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIG-QLKNLQTLNLWNN 153
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
++ +S +G L NL L L+ N+LT +P E+ L +L++L L N +KT+ +I L++
Sbjct: 154 QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKN 213
Query: 142 SKRI 145
KR+
Sbjct: 214 LKRL 217
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 24/113 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L+ L+L++N+L + S + +++L EL LSYNQLT+LP N+I
Sbjct: 234 LQNLQVLELNNNQLTTLSKEIG-RLQNLQELYLSYNQLTILP---------------NEI 277
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
++N L +L L NN++ +S +G L NL L+L++N+L+ E
Sbjct: 278 GQLKN--------LQVLELNNNQLKTLSKEIGQLKNLKRLELNNNQLSSEEKE 322
>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
Length = 394
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L +L++N+L LP I ++SL ELNLS NQLT LP K+L L L N
Sbjct: 213 LTSLVVSNLNYNQLTE--LPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDN 270
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L LNL NN+++ V + +G L +L L L DN LT++P E+ L
Sbjct: 271 MLTELPAEIG-QLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLK 329
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N + +V +I Q
Sbjct: 330 SLRELKLWNNRLTSVPAEIGQ 350
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L L L N+L S +P I + SL NL+YNQLT LP K+L L L N
Sbjct: 75 LKSLVELKLEGNELTS--MPAEIGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + LT L L L+ N+++ V + +G L +L L L DN LT++P E+ L
Sbjct: 133 HLTILPAEIG-QLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLK 191
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L L GN + ++ +I Q + ++S++ ++L
Sbjct: 192 SLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQL 226
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+LS+N+L S LP I ++SL EL L N LT LP K+L L L N
Sbjct: 236 LKSLRELNLSNNQLTS--LPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNN 293
Query: 60 KINNME--------------NDYFLT--------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ ++ D LT L L L L NN+++ V + +G L +
Sbjct: 294 RLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTS 353
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L LDL NELT VP E+ L L L L N + ++ +I
Sbjct: 354 LTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L L N+L S +P I + SL EL L N LT LP K+L L L N
Sbjct: 144 LTSLVELKLEGNELTS--VPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ +M + LT L + NL N+++E+ + +G L +L L+LS+N+LT +P E+ L
Sbjct: 202 ELTSMPAEIG-QLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLK 260
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N + + +I Q
Sbjct: 261 SLVELKLEDNMLTELPAEIGQ 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
LG N++ ++ + LT L L L+ N+++ V + +G L L L L DN LT++P E+
Sbjct: 14 LGVNQLTSLPAEIG-QLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEI 72
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L L L GN + ++ +I Q + ++S++ ++L
Sbjct: 73 GQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQL 111
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L +NL NQLT LP +L L L N++ ++ + LT L L L++N
Sbjct: 6 LGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIG-QLTALVELKLEDNM 64
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++E+ + +G L +L L L NELT +P E+ L L
Sbjct: 65 LTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASL 101
>gi|421132053|ref|ZP_15592227.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410356605|gb|EKP03922.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 403
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LD+S N+ + P F ++ L LNLS NQLT LP +NL L L N
Sbjct: 229 LENLKILDISRNRF--STFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+N++ N+ L L +L L N +S + +G+L L+IL L N+LT +P E+ L
Sbjct: 287 KLNSLPNEMG-QLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLE 345
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L +L L N + ++ N++ Q
Sbjct: 346 NLVTLSLSNNKLISIPNELGQ 366
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L +L LS NKL+S LP I + +L L+L N+ LP +NL L + N
Sbjct: 183 LKNLISLYLSGNKLIS--LPKEIRQLGNLGILHLFDNEFNTLPEEIGKLENLKILDISRN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + +++ L KL++LNL NN+++ + +G L NL IL LS N+L +P E+ L
Sbjct: 241 RFSTFPKEFW-KLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLK 299
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L+L GN + + +I + K I + +++L
Sbjct: 300 NLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQL 334
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
T ++ +L+L +N+++ + +G L+NL L L +NELT +P E+ L +LK+L + N
Sbjct: 44 TPNEVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNR 103
Query: 131 IKTVRNDILQDSKRIISHIKTSRLDYHCQNV 161
I T + + + + +RL Y + +
Sbjct: 104 ISTFPKEFWKLKNLEVLFLNGNRLSYLPEEI 134
>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 422
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 25/161 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLL-- 56
L +L+ L+L N+L +LP I +++LTELNL+ N LT LP + KNL LLL
Sbjct: 176 QLQNLRELNLDGNQL--KTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233
Query: 57 --------GFNKINNMENDYF---LT--------LTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ N++ Y LT L L LNL N+I+ + ++G L N
Sbjct: 234 NELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQN 293
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +L LS+N+L +P E+ L +L+ L L GN I T+ DI
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDI 334
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
++SL ELNLS NQ+T LP +NL L L N++ + + L L L+L N+
Sbjct: 268 LKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIG-QLQNLRELDLSGNQ 326
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
I+ + ++G+L +L L+LS N++T +P E+ L L+ L LGGN I T+ +I
Sbjct: 327 ITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEI 380
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L ++ L LS+N+L + LP I ++ L EL+L+ N LT LP +NL L L N
Sbjct: 85 LQKIERLSLSNNQLTT--LPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L L NN++ + ++G L NL L+L N+L +P ++ L
Sbjct: 143 QLKTLPKDIG-QLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQ 201
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L NP+ T+ DI
Sbjct: 202 NLTELNLTNNPLTTLPKDI 220
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LS LK ++ ++++L D+R L+ +N T+ + +NLT L L N++
Sbjct: 20 LSQLKAQEIGTYHNLTEALQNPTDVRILS----LHNNETLPKEIGELQNLTELYLSSNQL 75
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L K+ L+L NN+++ + ++G L L LDL++N LT +P ++ L +L
Sbjct: 76 KTLPKEIG-KLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNL 134
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L+L N +KT+ DI Q
Sbjct: 135 RELYLTNNQLKTLPKDIGQ 153
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+LS N++ + LP I +++L L LS NQL LP +NL L L N
Sbjct: 268 LKSLRELNLSGNQITT--LPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 325
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + D L L LNL N+I+ + +G L +L L+L N++T +P E+ L
Sbjct: 326 QITTLPKDIG-ELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLK 384
Query: 120 HLKSLFL 126
+L+ L+L
Sbjct: 385 NLQVLYL 391
>gi|195130625|ref|XP_002009752.1| GI15063 [Drosophila mojavensis]
gi|193908202|gb|EDW07069.1| GI15063 [Drosophila mojavensis]
Length = 370
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L ELNLS NQL P T+ + L +L LG NKI+++ D + + L +L+L N ++
Sbjct: 127 TLKELNLSGNQLIHFPEQVTELRQLKYLYLGGNKISSISKDIW-KMQSLHVLSLGGNLVN 185
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
EV VG L L L L DN + ++P ++ L +LKSL L N +K + DI+
Sbjct: 186 EVPEAVGSLSQLQALVLCDNLIENLPMSIARLKNLKSLLLHKNRLKHLPKDIV 238
>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENALTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 328
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L L NQLT LP KNL L L +N
Sbjct: 65 LQKLQSLYLPNNQLTT--LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L KL L L NN+++ + +G L NL LDLS N LT +P E+ L
Sbjct: 123 QIKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 181
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + N+I Q
Sbjct: 182 NLQDLYLVSNQLTILPNEIGQ 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L+LS N+LT LP +NL L L N
Sbjct: 134 LQKLQSLGLDNNQLTT--LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L LNL+NN+++ +S + L NL LDL N+LT P E+ L
Sbjct: 192 QLTILPNEIG-QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 250
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L LG N + T+ I Q
Sbjct: 251 NLQVLDLGSNQLTTLPEGIGQ 271
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 32/169 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L++LDLS N+L + LP I +++L +L L NQLT+LP KNL L L
Sbjct: 156 QLQNLQSLDLSTNRLTT--LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 213
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N++ ++ ++ T K L +L+L +N+++ + +G L
Sbjct: 214 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 273
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
NL LDL N+LT +P E+ L +L+ LFL N + + Q+ KRI
Sbjct: 274 NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS------QEKKRI 316
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKI 61
++TLDLS N+ +LP I +++L +LNLS NQ+ +P + + L L L N++
Sbjct: 21 KVRTLDLSANRF--KTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 78
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L KL L L N+++ + +G L NL L+LS N++ +P ++ L L
Sbjct: 79 TTLPQEIG-QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKL 137
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+SL L N + T+ +I Q
Sbjct: 138 QSLGLDNNQLTTLPQEIGQ 156
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNL N+I + + L L L L +N+LT +P E+ L L+ L+L N +
Sbjct: 42 LKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQL 101
Query: 132 KTVRNDILQDSKRIISHIKTSRLDYH 157
T+ +I Q + ++K+ L Y+
Sbjct: 102 TTLPQEIGQ-----LKNLKSLNLSYN 122
>gi|194212322|ref|XP_001489281.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3 [Equus caballus]
Length = 1182
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N ++ + P + C+ L+ L L FN
Sbjct: 325 LSNMEILQLDHNNLTEVTKGWLYGLLMLQELHLSQNAISRISPDAWEFCQKLSELDLTFN 384
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 385 HLSRLDDSSFLGLSLLNTLHIGNNKVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGA 444
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 445 FSGLDKLRRLILQGNRIRSI 464
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 9 DLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEND 67
DLSHN+L S ++SL E+ L+ N+L +P + N+T L L N+I + +
Sbjct: 143 DLSHNRLSSIKASSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPE 202
Query: 68 YFLTLTKLSLLNLKNNKISEV--------------------SSNVGDLINLA----ILDL 103
+ L L+L +N ISE+ S G NLA +L L
Sbjct: 203 HLKQFQSLETLDLSSNNISELKTAFPPLQLKYLYINSNRVTSMEPGYFDNLANTLLVLKL 262
Query: 104 SDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ N + +P ++ L L+ L L N IK +
Sbjct: 263 NRNRIAAIPPKMFRLPQLQHLELNRNKIKNI 293
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
LK L ++ N++ S F ++ +L L L+ N++ +P L HL L NKI
Sbjct: 231 QLKYLYINSNRVTSMEPGYFDNLANTLLVLKLNRNRIAAIPPKMFRLPQLQHLELNRNKI 290
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSLF 119
N++ F L L L ++ N ++++ L N+ IL L N LT+V L L
Sbjct: 291 KNIDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEVTKGWLYGLL 350
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I + D + +++ ++ SRLD
Sbjct: 351 MLQELHLSQNAISRISPDAWEFCQKLSELDLTFNHLSRLD 390
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+++ L L+ N++V + LP + +SL L+LS N ++ L L +L + N++
Sbjct: 184 ANITLLSLAGNRIV-EILPEHLKQFQSLETLDLSSNNISELKTAFPPLQLKYLYINSNRV 242
Query: 62 NNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP-CELSSLF 119
+ME YF L L +L L N+I+ + + L L L+L+ N++ ++ L
Sbjct: 243 TSMEPGYFDNLANTLLVLKLNRNRIAAIPPKMFRLPQLQHLELNRNKIKNIDGLTFQGLG 302
Query: 120 HLKSLFLGGNPI 131
LKSL + N +
Sbjct: 303 ALKSLKMQRNGV 314
>gi|78100550|gb|ABB21097.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 322
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+L +NKL S F LT L+L+YN+L LP V NL L L +NK+ ++
Sbjct: 64 LELDYNKLSSLPSKAFQSFTKLTFLSLNYNELQTLPAGVFDHLVNLDRLHLNYNKLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
+ F +LTKL+ L L+NN++ + V D L L L L +N+L VP L ++K
Sbjct: 124 SKIFDSLTKLTWLRLENNQLQSLPHGVFDKLTELKELSLDNNQLKRVPEGAFDKLQNIKD 183
Query: 124 LFLGGNPIKTVRNDILQDSKRI 145
L L NP NDIL SK I
Sbjct: 184 LRLEENPWDCSCNDILYLSKWI 205
>gi|320165161|gb|EFW42060.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 641
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ LK L L +N+L S F + +L L+L NQ+T + LT+L L N
Sbjct: 109 LTALKHLPLGYNELADISATAFAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSN 168
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ N + F L+ L+LLNL++N+I+ +S+N DL L +L L N++T +P +
Sbjct: 169 QLTNFAANVFAGLSALALLNLESNQITSISANAFTDLTALTLLYLQRNQITSIPTSAFTG 228
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L LK L L N I + +
Sbjct: 229 LTALKDLELFNNQITAIAANTFSG 252
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L N+L + + +F + +L LNL NQ+T + TD LT L L N
Sbjct: 157 LTTLTYLRLDSNQLTNFAANVFAGLSALALLNLESNQITSISANAFTDLTALTLLYLQRN 216
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+I ++ F LT L L L NN+I+ +++N L L L L N++T + +
Sbjct: 217 QITSIPTSAFTGLTALKDLELFNNQITAIAANTFSGLSALTQLYLFSNQITSIAANAFTG 276
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L L +L L GN T+ +
Sbjct: 277 LPALTALALDGNRFTTLPPGLF 298
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 27 RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
RSLTE+ T +PV N T L L N+I ++ F LT L+ LNL +N I
Sbjct: 51 RSLTEIP------TAVPV-----NTTSLELNNNQITSISAGAFTGLTALTYLNLNSNSIR 99
Query: 87 EVSSNV-GDLINLAILDLSDNELTDVPC-ELSSLFHLKSLFLGGNPIKTVR 135
+S+N L L L L NEL D+ + L L +L L N I ++
Sbjct: 100 SISANAFTGLTALKHLPLGYNELADISATAFAGLTALNALHLQSNQITSIS 150
>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 319
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+LT P +NL L L N
Sbjct: 93 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 151 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 210 NLQELYLRNNRLTVLPKEIGQ 230
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 129 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 187
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 188 LQTLNLQDNQLATLPVEIGQ 207
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 185 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 243 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 296
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 297 RIQKLFPDSN 306
>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 572
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+LT P +NL L L N
Sbjct: 93 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 151 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 210 NLQELYLRNNRLTVLPKEIGQ 230
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L MLP +NL L L NK
Sbjct: 70 LKNLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNK 128
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 129 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 187
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 188 LQTLNLQDNQLATLPVEIGQ 207
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 398 LKNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 455
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 456 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 514
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 515 KLQTLDLRNNQLTTLPTEIGQ 535
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 421 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 479 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 537
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 538 NLQWLYLQNN 547
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK DL K S P + + R+L EL L + LP + KNL +L LG N +
Sbjct: 329 LKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGL 388
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 389 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKL 447
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 448 QKLDLSVNQFTTFPKEI 464
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 444 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 502 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 550
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 185 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 243 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 296
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 297 RIQKLFPDSN 306
>gi|340728966|ref|XP_003402782.1| PREDICTED: leucine-rich repeat-containing protein 47-like [Bombus
terrestris]
Length = 531
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L LK LD S NKL S LP I + LT +N S N L LP LT L L N+
Sbjct: 90 LGKLKVLDCSGNKLTS--LPNEIGKLPQLTTMNFSSNLLRSLPTQIGNIKLTILNLSNNQ 147
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L+ + + N+I E+ + + L++L I++++DN ++ +P E++
Sbjct: 148 FEAFPDVCYPELIHLTEIYVNGNQIKEIPAAINQLVSLKIINVADNLISVIPGEIADCNK 207
Query: 121 LKSLFLGGNPIKTVRNDILQDS---KRIISHIKTSRLDYHCQNVDGG 164
LK L+L GN + R L D K+II ++K HC DG
Sbjct: 208 LKELYLKGNTLTDKRLSKLVDQCHNKQIIEYVK-----LHCLRQDGS 249
>gi|195128175|ref|XP_002008541.1| GI11762 [Drosophila mojavensis]
gi|193920150|gb|EDW19017.1| GI11762 [Drosophila mojavensis]
Length = 531
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFNK 60
S L LDLS+N +V+ F L EL+L++N++ + T +T L L N
Sbjct: 80 SQLTFLDLSYNDMVTIPERSFAYHAKLQELHLNHNKIGQVTNKTFTGLSTITVLNLRGNL 139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELS--S 117
I +E F + KL LNL N+IS + + D LINL++L L DN LT VP +L+ +
Sbjct: 140 IAELEYRTFSPMVKLVELNLGQNRISHIDPHAFDGLINLSMLYLDDNTLTTVPSQLTFQA 199
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L L+LG N T+ QD
Sbjct: 200 LPGLAELYLGTNSFMTIPAGAFQD 223
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHL-LLGF 58
L ++ LDLS N+L + + L +L+L N ++ + L HL + G
Sbjct: 248 LEGIRYLDLSDNRLQAVPSAALQHLGRLEQLSLGQNDFEVIATGAFVGLRELRHLEITGA 307
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNK-ISEVSSN-VGDLINLAILDLSDNELTDVPCELS 116
+++ +E+ F T L LNL NK ++E+ +N VG +L+ + L +N+L+ + L
Sbjct: 308 HRLRRVESGAFADNTNLEHLNLSANKQLNELLANTVGGFPHLSTVILKENQLSTLSESLF 367
Query: 117 SLFHLKSLFLGGNPI 131
L++L L NP
Sbjct: 368 PWSDLQTLDLSENPF 382
>gi|320164539|gb|EFW41438.1| proto-oncogene tyrosine-protein kinase FYN [Capsaspora owczarzaki
ATCC 30864]
Length = 940
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L ++ N L S S F + ++T L+L N+LT +P + TD L L LG+N
Sbjct: 99 LTALNWLLMTSNFLTSLSASTFAGLTAVTVLSLFQNELTSIPSNLFTDLTALRQLNLGYN 158
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+ ++ F LT L++L+L N+I+ V +N+ L L L L N++T V +
Sbjct: 159 DLTSLPLSAFTGLTALNILSLHRNQITTVPANMFPGLSALKELYLHQNQITSVSANAFTG 218
Query: 118 LFHLKSLFLGGNPIKTV 134
L L SL+LG NP T+
Sbjct: 219 LNTLTSLYLGNNPFTTL 235
>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
Length = 584
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 147 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 204
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 205 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 263
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 264 QITNLDLQHN 273
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 357 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 416
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 417 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 475
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 476 QKLVLTNNQLTTLPRGI 492
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 383 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 440
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 441 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 499
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 500 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLP 559
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 560 PQIVAGGPS 568
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 328 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 387
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 388 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 442
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 124 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 183
Query: 132 KTV 134
+ +
Sbjct: 184 REI 186
>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
leucogenys]
gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
leucogenys]
Length = 582
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QELVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQELVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 447
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L LNLSYNQ+ LP + + L L L N
Sbjct: 184 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 242 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 300
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 301 NLQDLYLVSNQLTTIPKEIGQ 321
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L L+LS NQL +LP KNL L L N++
Sbjct: 49 VRVLDLSEQKL--KALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 106
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+L++N+++ + +G L NL L LS+N+LT P E+ L L+
Sbjct: 107 ILPKE-IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQ 165
Query: 123 SLFLGGNPIKTVRNDI 138
L L N IKT+ +I
Sbjct: 166 WLNLSANQIKTIPKEI 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 92 LKNLQMLDLSDNQLII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 150 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N IKT+ +I
Sbjct: 209 KLQWLNLSYNQIKTLPQEI 227
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + +P I +++L +L L NQLT +P +NL L LG N
Sbjct: 276 LQNLKVLFLNNNQLTT--IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 333
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 334 QLTILPKEIG-KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 392
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 393 NLQELYLSNNQLITIPKEIGQ 413
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT +P +NL L L N
Sbjct: 253 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 310
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 311 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 369
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 370 NLQELYLSNNQLTTIPKEIGQ 390
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 299 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN 356
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 357 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 415
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 416 NLQTLYLRNN 425
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+L+L K+ + +G L NL +LDLSDN+L +P E+ L +L+ L L N + +
Sbjct: 51 VLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPK 110
Query: 137 DILQ 140
+I Q
Sbjct: 111 EIRQ 114
>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
troglodytes]
gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
jacchus]
gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
paniscus]
gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
paniscus]
gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
gorilla]
gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
sapiens]
gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|326434375|gb|EGD79945.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1276
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
LS+L L HN+L+S S+ + L L++ +N LT L +LTHL LG N
Sbjct: 308 LSNLTVLSFIHNRLLSRSMFFLRHLGQLQRLDVRFNDLTRLISRAYWQLTSLTHLWLGDN 367
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCE-LSS 117
I + D +T+L ++++ + +S V + D L +DL++N L+ +P L+
Sbjct: 368 PIGRLPQDLLANMTRLDVIDISSAHVSLVPRGFLSDNKVLGRIDLANNLLSRLPAHLLNG 427
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
L HL ++ L N I T+ D +D+ + +
Sbjct: 428 LTHLHTVRLRNNVITTLHRDFFRDAHALTT 457
Score = 43.9 bits (102), Expect = 0.062, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ L++ +N+ + ++ F L L L+ N +T LP + L L L +N+
Sbjct: 239 LECLEIINNRHLHLNVDNFTPPMQLRALILNNNSMTTLPRNMFASLSQLKELRLDYNRFR 298
Query: 63 NMENDYFLTLTKLSLLNLKNNKI-SEVSSNVGDLINLAILDLSDNELTDVPC----ELSS 117
+ + F L+ L++L+ +N++ S + L L LD+ N+LT + +L+S
Sbjct: 299 RLNHTIFAPLSNLTVLSFIHNRLLSRSMFFLRHLGQLQRLDVRFNDLTRLISRAYWQLTS 358
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L HL +LG NPI + D+L + R+
Sbjct: 359 LTHL---WLGDNPIGRLPQDLLANMTRL 383
Score = 43.9 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L TLDLS N L L LTE N ++N+L +LP
Sbjct: 455 LTTLDLSRNGLGGLHPTLLSSCPGLTEFNCNHNELRLLPPL------------------- 495
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+F T ++ + L +N I+ + + +LDL +N LT +P ++ + L+ L
Sbjct: 496 ---FFQNNTNVTHVRLSDNAITSLEGVLRGPHQPHVLDLQNNHLTSLPIDM-DVSELQQL 551
Query: 125 FLGGNPI 131
L GNP+
Sbjct: 552 LLSGNPL 558
>gi|78100621|gb|ABB21132.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 320
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+L NKL S F LT L+L+ NQL LP V + KNL L L NK+ +
Sbjct: 64 LELDLNKLSSLPSKAFQSFTKLTFLSLNNNQLQTLPAGVFDELKNLETLWLEQNKLQTLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHLKS 123
F +LTKL+ L+L +NK+ + + V D L L L LS N+L VP E L ++K+
Sbjct: 124 PRVFDSLTKLTYLSLGSNKLQSLPNGVFDKLTELKTLYLSTNQLRSVPNEAFDYLSNIKT 183
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIK 150
L+L NP NDIL +K + ++++
Sbjct: 184 LWLDTNPWDCSCNDILYLAKWLATNLE 210
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
S +LT +P + TD L L NK++++ + F + TKL+ L+L NN++ + + V
Sbjct: 46 SSKELTAIPSNIPTDTDRLE---LDLNKLSSLPSKAFQSFTKLTFLSLNNNQLQTLPAGV 102
Query: 93 GD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDIL 139
D L NL L L N+L +P + SL L L LG N ++++ N +
Sbjct: 103 FDELKNLETLWLEQNKLQTLPPRVFDSLTKLTYLSLGSNKLQSLPNGVF 151
>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N+
Sbjct: 354 FSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 413
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L
Sbjct: 414 LTKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKD 472
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ I
Sbjct: 473 LQKLVLTNNQLTTLPRGI 490
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|344289124|ref|XP_003416295.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
[Loxodonta africana]
Length = 560
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGF-- 58
L+ LK LDLS+N L+ S+P+ +R+L EL L L P+ CK+L HL LLG
Sbjct: 93 LARLKGLDLSNNPLLFSSIPVISHIRTLRELRLYKIYLREFPIVI-CKSLHHLELLGLSG 151
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ + + TKL + LK NK + L NL I+DL +N+L +P E+ +L
Sbjct: 152 NLLKSLPQE-IVNQTKLREIYLKQNKFEVFPQELCVLYNLEIIDLDENKLNSIPEEIGNL 210
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L+ ++ N + + + + SK
Sbjct: 211 TMLQKFYVAYNKVPFIPDSLYHCSK 235
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLT-HLLLGFNKI 61
S L LD SHN L L ++ +TE+ LS NQL +P CK + LL N
Sbjct: 234 SKLSVLDFSHNLLYCIPHTL-TELTEMTEIGLSGNQLEKVPRLI-CKWTSLQLLYLRNTG 291
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
F L L L+L N + V L NL IL L DN++ +P E+ SL L
Sbjct: 292 LRSLRRSFRRLVNLRFLDLSQNHLEHCPLQVCALKNLEILALDDNKIRQLPPEIGSLSKL 351
Query: 122 KSLFLGGN 129
K L L GN
Sbjct: 352 KILGLTGN 359
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQD 141
NN I+ + ++ L N+ IL L+ N+L ++ EL L LK L L NP +L
Sbjct: 57 NNDIAVIPQDIQHLKNIRILYLNKNKLRNLCPELGKLARLKGLDLSNNP-------LLFS 109
Query: 142 SKRIISHIKTSR 153
S +ISHI+T R
Sbjct: 110 SIPVISHIRTLR 121
>gi|299856773|pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
gi|299856774|pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 177
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 178 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 229
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 230 SDGKVVRTVT 239
>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
aries]
gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 646
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L L+ LDL N+L LP+ I ++SL +L+L NQLT LP KNL L L N
Sbjct: 245 LKSLEKLDLQGNQLTI--LPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ +D L +L +LNL+ N+++ + +++G L +L L LS N+LT +P L
Sbjct: 303 TLTSLLDDIG-KLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLK 361
Query: 120 HLKSLFLGGNPIKTV 134
L+ L L GN +T+
Sbjct: 362 KLEELNLEGNYFQTM 376
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L+ L LS NKL LP F ++ L ELNL N TML + K+L L L N
Sbjct: 337 LKSLRWLSLSSNKLTR--LPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASN 394
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L +L L L NK+ + ++G L L LDL N L+ +P L L
Sbjct: 395 NLTTLPENIG-QLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLK 453
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L +G NP+ T+ N I
Sbjct: 454 KLEELNIGANPLVTLPNSI 472
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 27/124 (21%)
Query: 8 LDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEN 66
L+L HN+L + LP I ++++L +LNL YNQLT LP F K+ N+E
Sbjct: 42 LNLEHNQLTT--LPANIGELKNLKKLNLEYNQLTTLPAS------------FAKLQNLEE 87
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN-ELTDVPCELSSLFHLKSLF 125
LNL NK + + ++V L NL L+L+DN L +P + L +L+ L
Sbjct: 88 -----------LNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLN 136
Query: 126 LGGN 129
L N
Sbjct: 137 LTSN 140
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L++LNL+ N ++++ +++G L +L LDL N+LT +P + L LK L LG N +
Sbjct: 222 LKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQL 281
Query: 132 KTVRNDILQ 140
T+ I Q
Sbjct: 282 TTLPTSIGQ 290
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 26/154 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +LK L+L + LV+ LP I +++LT LNL N LT LP
Sbjct: 199 LHNLKVLNLKSSGLVA--LPNNIGQLKNLTILNLRENYLTKLPTSIG------------- 243
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L L L+L+ N+++ + ++G L +L LDL N+LT +P + L +
Sbjct: 244 ----------QLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKN 293
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ LFL N + ++ +DI + + + +++ +RL
Sbjct: 294 LQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRL 327
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 28/165 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L +N+L + LP F +++L ELNL+ N+ T LP T +NL L L N
Sbjct: 59 LKNLKKLNLEYNQLTT--LPASFAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDN 116
Query: 60 --------KINNMENDYFLTLT----------------KLSLLNLKNNKISEVSSNVGDL 95
I ++N L LT KL +LNL + + +N+
Sbjct: 117 LSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLP 176
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L IL ++D+ LT +P S L +LK L L + + + N+I Q
Sbjct: 177 ESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQ 221
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 61 INNMENDYFLTLT-------KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
I EN +++LT ++ LNL++N+++ + +N+G+L NL L+L N+LT +P
Sbjct: 18 IQAQENKVYMSLTEALKTPEQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPA 77
Query: 114 ELSSLFHLKSLFLGGNPIKTV 134
+ L +L+ L L N T+
Sbjct: 78 SFAKLQNLEELNLTRNKFTTL 98
>gi|456875117|gb|EMF90348.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ S LP I ++++L EL+LS N+LT LP+ + KNL L L N
Sbjct: 40 LRNLKELNLGRNQITS--LPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRN 97
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + +FL+L L +L L NK + + L NL LD ++N L ++P L L
Sbjct: 98 RISVLP-KHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 156
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L L+L GN +K +L S + +K+ L+Y+
Sbjct: 157 NLNILYLLGNELK-----VLPSSFSELQSLKSLNLNYN 189
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDLS N+L S LP+ I ++++L L L N++++LP +NL L L N
Sbjct: 63 LQNLKELDLSDNRLTS--LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQN 120
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L L L L+ N++ E+ +G L NL IL L NEL +P S L
Sbjct: 121 KFRKFPEE-ILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQ 179
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 180 SLKSLNLNYNRFQVFPKELI 199
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS NK + + +++L L+ + N+L LP +NL L L N+
Sbjct: 109 LQNLKILYLSQNKFRKFPEEI-LQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNE 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L L LNL N+ + L NL IL+L+ N+L +P E+ +L
Sbjct: 168 LKVLPSS-FSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDK 226
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFL GN +K + + I
Sbjct: 227 LRVLFLEGNQLKRIPSGI 244
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLLG 57
L +L+ LD + N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 132 LQNLEWLDFNENRL--KELP--ERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLN 187
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N+ + ++L L +L L N++ + +G L L +L L N+L +P +
Sbjct: 188 YNRFQVFPKE-LISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKRIPSGIEK 246
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L +L+SL+L N + T+ +I
Sbjct: 247 LQNLESLYLQENQLTTLPEEI 267
>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LGKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L + L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDIQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L +LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L +
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDI 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F L LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLGKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|348516533|ref|XP_003445793.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4 [Oreochromis niloticus]
Length = 955
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
++L++L LS K+ S L D++ L L+LSYN++ LP C L + N I
Sbjct: 306 NNLESLTLSGTKISSIPSDLCEDLKVLRTLDLSYNEIKQLPSLQGCTQLQEINFQHNHIE 365
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPCELSSLFHL 121
+ D F L+ L LL+L N+I + + L L LDLS N LT +P + L L
Sbjct: 366 KINQDTFQGLSALRLLDLSRNEIRVIHRDAFLTLRALTNLDLSMNSLTGIPT--AGLSVL 423
Query: 122 KSLFLGGNP 130
L L GNP
Sbjct: 424 SQLKLSGNP 432
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L++L L N + + F ++ L L L N L +PV + NL L L N
Sbjct: 115 LHSLQSLRLDANHITTVPDDSFESLQQLRHLWLDDNNLMEVPVGSLRHQANLQALTLALN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
+I + ++ F LT L +L+L NN+I+E+ N L NL LDL+ N L P + +L
Sbjct: 175 RILYIPDNAFANLTSLVVLHLHNNRINEIGDNCFSGLANLETLDLNFNNLKVFPKAIQAL 234
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N I ++
Sbjct: 235 PKLKELGFHSNDIASI 250
>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP------VCTDC--------K 49
L L++ N+L S LPL F S+ ELNL+ NQLT +P V + K
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 50 NLTHLLLGF----------NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
L H L F NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNFRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|78100666|gb|ABB21154.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 324
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L NKL S F ++ LT L+L NQL LP V +NL L L +N++ ++
Sbjct: 64 LVLQGNKLSSLPRTAFHNLNKLTFLSLGTNQLQTLPAGVFDQLRNLETLYLQYNELKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
+ F LTK++ L+L NK+ + V D L L L+L N+L VP SL L +
Sbjct: 124 SGIFDKLTKITYLDLYENKLQRLPEGVFDKLTELKTLNLEINQLRSVPEGAFESLSSLNN 183
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
+ L NP RNDIL +K + + GG + E T E
Sbjct: 184 IMLTNNPWDCTRNDILYMAKWLKKKQDEGLGGVDTAGCEEGGKAVLEITEE 234
>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N+
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQP 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQ T +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRELRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+ T +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|312380309|gb|EFR26341.1| hypothetical protein AND_07674 [Anopheles darlingi]
Length = 565
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LG 57
L LK LDLS NKL S LP F +RSLT LNLS+NQL + + L HL L
Sbjct: 87 LGELKVLDLSGNKLTS--LPTEFGQLRSLTTLNLSFNQLKTV----ELTQLAHLSVCNLS 140
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + Y + L+ + L+ N I+E+ + L L+++DN + VP +S
Sbjct: 141 GNQLEEVPEFYVGEVHHLTEVILEKNLITELPEALTRHQILKTLNVADNRIEQVPKYVSK 200
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD---SKRIISHIKTS 152
LK + L GNP+K R L D SK+++ +++ S
Sbjct: 201 CVKLKEINLKGNPLKDKRLLKLVDQCRSKQVLDYVEKS 238
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+LT L L L NKI+E+ + +G L L +LDLS N+LT +P E L L +L L N
Sbjct: 63 SLTHLQSLLLFRNKIAELPAAIGTLGELKVLDLSGNKLTSLPTEFGQLRSLTTLNLSFNQ 122
Query: 131 IKTV 134
+KTV
Sbjct: 123 LKTV 126
>gi|302847486|ref|XP_002955277.1| hypothetical protein VOLCADRAFT_96185 [Volvox carteri f.
nagariensis]
gi|300259349|gb|EFJ43577.1| hypothetical protein VOLCADRAFT_96185 [Volvox carteri f.
nagariensis]
Length = 1149
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 5 LKTLDLSHNKLVSD--SLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L LS+N L S SLP ++ +L + L N+L LP V T L+ L+ FN
Sbjct: 565 LTQLKLSNNNLTSGPASLPEWLTSFGALATVVLDRNRLAELPAVLTRLPRLSILMASFNV 624
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+N++ D + ++L L L+NN++SE+ +++ L L L LS N LT +P L
Sbjct: 625 ISNLQQDVLVGFSRLKALVLQNNQVSELPASISRLTELKALVLSGNRLTSLPDALCGCSG 684
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L + N + ++ + I
Sbjct: 685 LRLLDMSHNGLTSLPSGI 702
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
HL L+LS N+L S LP + L ++ L+ N+LT LP C + L L N
Sbjct: 254 HLGVLNLSFNRLAS--LPPALGASPVLQQMYLANNRLTDLPRTFACLPMVDLFLSENLFE 311
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L +++L+ L++ ++ EV +G + L LDLS N+L+ +P LS L L
Sbjct: 312 RVPVA-VLGMSQLAKLSMACCRLREVPDALGSVATLKFLDLSFNQLSSLPDGLSRLTALN 370
Query: 123 SLFLGGNPI 131
+L + NP+
Sbjct: 371 ALNVSFNPL 379
>gi|195042980|ref|XP_001991528.1| GH12711 [Drosophila grimshawi]
gi|193901286|gb|EDW00153.1| GH12711 [Drosophila grimshawi]
Length = 368
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFI--------DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLL 55
L TL +N L S SLP + +L ELNLS NQL P T+ + L +L
Sbjct: 94 LVTLIAKNNLLTSSSLPKSLLTKQTTGNGTSTLKELNLSGNQLIHFPEQVTELRQLKYLY 153
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
LG NKI+ + D + + L +L+L N ++EV VG L L L L DN + +P +
Sbjct: 154 LGGNKISIISKDIW-KMQSLHVLSLGGNLVNEVPEAVGSLSQLQALVLCDNHIEHLPTSI 212
Query: 116 SSLFHLKSLFLGGNPIKTVRNDIL 139
+ L +LKSL L N +K + DI+
Sbjct: 213 ARLKNLKSLLLHKNRLKHLPKDIV 236
>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 422
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 25/161 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLL-- 56
L +L+ L L N+L +LP I +++LTELNL+ N LT LP + KNL LLL
Sbjct: 176 QLQNLRELYLDGNQL--KTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233
Query: 57 --------GFNKINNMENDYF---LT--------LTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ N++ Y LT L L LNL N+I+ + ++G L N
Sbjct: 234 NELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQN 293
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +L LS+N+L +P E+ L +L+ L L GN I T+ DI
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDI 334
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+ LK L +S+ + +LP I ++SL ELNLS NQ+T LP +NL L L N
Sbjct: 243 IGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSEN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N+I+ + ++G+L +L L+LS N LT +P ++ L
Sbjct: 303 QLATLPKEIG-QLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQ 361
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LGGN I T+ +I
Sbjct: 362 SLRELNLGGNQITTIPKEI 380
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 17 SDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
+++LP I ++++LTEL LS NQL LP + + L L N++ + D L K
Sbjct: 52 NETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIG-KLKK 110
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L+L NN ++ + +G L NL LDL++N+L +P ++ L +L+ L+L N +KT+
Sbjct: 111 LRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTL 170
Query: 135 RNDILQ 140
DI Q
Sbjct: 171 PKDIGQ 176
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L LS N+L +LP I ++ + L+LS NQLT LP K L L L N
Sbjct: 62 LQNLTELYLSSNQL--KTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNN 119
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L NN++ + ++G L NL L L +N+L +P ++ L
Sbjct: 120 LLTTLPKEIG-QLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQ 178
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L GN +KT+ DI
Sbjct: 179 NLRELYLDGNQLKTLPKDI 197
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L ++ L LS+N+L + LP I ++ L EL+L+ N LT LP +NL L L N
Sbjct: 85 LQKIERLSLSNNQLTT--LPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNN 142
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L L NN++ + ++G L NL L L N+L +P ++ L
Sbjct: 143 QLKTLPKDIG-QLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQ 201
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L L NP+ T+ DI
Sbjct: 202 NLTELNLTNNPLTTLPKDI 220
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L LS N+L + LP I +++L EL+LS NQ+T LP + ++L L L
Sbjct: 290 QLQNLQVLYLSENQLAT--LPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSG 347
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSD 105
N + + D L L LNL N+I+ + +G L NL +L L D
Sbjct: 348 NLLTTLPKDIG-KLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 393
>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 659
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+TLDL + KL LP I +++L L+LS+N LT LP +NL L L FN +
Sbjct: 51 RTLDLRYQKLTI--LPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTT 108
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L LNL + K++ + +G L NL +L L N+LT +P E+ L +LK
Sbjct: 109 LPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKV 167
Query: 124 LFLGGNPIKTVRNDILQ 140
LFL N + T+ +I Q
Sbjct: 168 LFLNNNQLTTLPTEIRQ 184
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP + + +L LNL+ +LT LP KNL L+L +N
Sbjct: 93 LRNLQELDLSFNSLTT--LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L NN+++ + + + L NL +LDL +N+LT +P E+ L
Sbjct: 151 QLTALPKEIG-QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 210 NLQELYLSYNQLTILPKEIGQ 230
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I +++L L+L NQLT+LP +NL L L +N
Sbjct: 162 LKNLKVLFLNNNQLTT--LPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL + K++ + +G L NL LDLS N LT +P E+ L
Sbjct: 220 QLTILPKEIG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLE 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 279 NLQRLDLHQNRLATLPMEIGQ 299
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LKTL+L +L + LP I ++++L LNL NQLT LP + +NL L+L N
Sbjct: 392 LQNLKTLNLIVTQLTT--LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 449
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L L N+++ + +G L NL LDL N+LT +P E+ L
Sbjct: 450 RITALPKEIG-QLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 508
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 509 NLQELCLDENQLTTLPKEIEQ 529
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV---------------- 44
L +L+ LDL +N+L LP I +++L EL LSYNQLT+LP
Sbjct: 185 LKNLQMLDLGNNQLTI--LPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQ 242
Query: 45 --------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+NL L L FN + + + L L L+L N+++ + +G L
Sbjct: 243 KLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLK 301
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NL LDL+ N+LT +P E+ L +L+ L L N + T+ +I Q
Sbjct: 302 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 345
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL+ NKL + LP I +R+L EL+L NQLT LP +NL L L
Sbjct: 300 LKNLQELDLNSNKLTT--LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVT 357
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +++ + +G+L NL L+L +LT +P E+ L
Sbjct: 358 QLTTLPKEIG-ELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQ 416
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L N + T+ +I
Sbjct: 417 NLKTLNLLDNQLTTLPKEI 435
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L L NQLT LP +NL L L N
Sbjct: 438 LQNLEILVLRENRITA--LPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQN 495
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + + L NL +LDL +N+LT +P E+ L
Sbjct: 496 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 554
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 555 SLQVLALGSNRLSTLPKEIGQ 575
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L L+LS+N LT LP +NL L L N
Sbjct: 231 LENLQRLNLNSQKLTT--LPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 289 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 348 NLKTLNLIVTQLTTLPKEI 366
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT LP ++L L LG N
Sbjct: 507 LQNLQELCLDENQLTT--LPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN 564
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L +L L +N++ + +G L NL L L +N+LT P E+ L
Sbjct: 565 RLSTLPKEIG-QLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK 623
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L+ L L NP+ + ++ KRI
Sbjct: 624 NLQELHLYLNPLSS------KEKKRI 643
>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
Length = 332
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS+L+ L L +N+ + LP I + L LNL +NQLT LP + L L L N
Sbjct: 134 LSNLQRLHLEYNRFTT--LPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDLSDN+L +P E+ +L
Sbjct: 192 RLATLPKEIG-TLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQ 250
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N ++T+ +I Q
Sbjct: 251 RLEWLSLKNNQLRTLPQEIGQ 271
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 8 LDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
L L++N+L + LP I + +L +LN+ NQL LP +NL L L N++ +
Sbjct: 2 LRLAYNQLTT--LPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLP 59
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ TL KL L L NN+++ + +G L L L L++N+L +P E+ L +LK L
Sbjct: 60 KEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELI 118
Query: 126 LGGNPIKTVRNDI 138
L N +++ +I
Sbjct: 119 LENNRLESFPKEI 131
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +N+L + LP I ++ L L L+ NQL LP +NL L L N
Sbjct: 180 LERLEWLNLYNNRLAT--LPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDN 237
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
++ + + TL +L L+LKNN++ + +G L NL LDLS N T P E+
Sbjct: 238 QLVTLPEEIG-TLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEI 292
>gi|253401404|gb|ACT31458.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 399
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
++SL ELNLS NQ+T LP +NL L L N++ + + L L L+L N+
Sbjct: 245 LKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIG-QLQNLRELDLSGNQ 303
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
I+ + +G+L +L L+LS N++T +P E+ L L+ L LGGN I T+ +I
Sbjct: 304 ITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEI 357
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 25/160 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLL--- 56
L +L+ L L N+L +LP I +++LTELNL+ N LT LP + KNL LLL
Sbjct: 154 LQNLRELYLDGNQL--KTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 211
Query: 57 -------GFNKINNMENDYF---LT--------LTKLSLLNLKNNKISEVSSNVGDLINL 98
K+ N++ Y LT L L LNL N+I+ + ++G L NL
Sbjct: 212 ELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNL 271
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+L LS+N+L +P E+ L +L+ L L GN I T+ +I
Sbjct: 272 QVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKEI 311
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 17 SDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
+++LP I ++++LTEL LS NQL LP + + L L N++ + D L K
Sbjct: 52 NETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIG-KLKK 110
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L+L NN ++ + +G L NL L L +N+L +P ++ L +L+ L+L GN +KT+
Sbjct: 111 LRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTL 170
Query: 135 RNDI 138
DI
Sbjct: 171 PKDI 174
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LS LK ++ ++++L D+R L+ +N T+ + +NLT L L N++
Sbjct: 20 LSQLKAQEIGTYHNLTEALQNPTDVRILS----LHNNETLPKEIGELQNLTELYLSSNQL 75
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L K+ L+L NN+++ + ++G L L LDL++N LT +P E+ L +L
Sbjct: 76 KTLPKEIG-KLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNL 134
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L+L N +KT+ DI Q
Sbjct: 135 RELYLYNNQLKTLPKDIGQ 153
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+LS N++ + LP I +++L L LS NQL LP +NL L L N
Sbjct: 245 LKSLRELNLSGNQITT--LPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L LNL N+I+ + +G L +L L+L N++T +P E+ L
Sbjct: 303 QITTLPKEIG-ELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLK 361
Query: 120 HLKSLFL 126
+L+ L+L
Sbjct: 362 NLQVLYL 368
>gi|418745007|ref|ZP_13301349.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|418755666|ref|ZP_13311862.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409963871|gb|EKO31771.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|410794010|gb|EKR91923.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ S LP I ++++L EL+LS N+LT LP+ + KNL L L N
Sbjct: 40 LRNLKELNLGRNQITS--LPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRN 97
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + +FL+L L +L L NK + + L NL LD ++N L ++P L L
Sbjct: 98 RISVLP-KHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 156
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L L+L GN +K +L S + +K+ L+Y+
Sbjct: 157 NLNILYLLGNELK-----VLPSSFSELQSLKSLNLNYN 189
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDLS N+L S LP+ I ++++L L L N++++LP +NL L L N
Sbjct: 63 LQNLKELDLSDNRLTS--LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQN 120
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L L L L+ N++ E+ +G L NL IL L NEL +P S L
Sbjct: 121 KFRKFPEE-ILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQ 179
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 180 SLKSLNLNYNRFQVFPKELI 199
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS NK + + +++L L+ + N+L LP +NL L L N+
Sbjct: 109 LQNLKILYLSQNKFRKFPEEI-LQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNE 167
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L L LNL N+ + L NL IL+L+ N+L +P E+ +L
Sbjct: 168 LKVLPSS-FSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDK 226
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFL GN +K + + I
Sbjct: 227 LRVLFLEGNQLKQIPSGI 244
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLLG 57
L +L+ LD + N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 132 LQNLEWLDFNENRL--KELP--ERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLN 187
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N+ + ++L L +L L N++ + +G L L +L L N+L +P +
Sbjct: 188 YNRFQVFPKE-LISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEK 246
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L +L+SL+L N + T+ +I
Sbjct: 247 LQNLESLYLQENQLTTLPEEI 267
>gi|126570718|gb|ABO21293.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDL L + S F + LT LNL YNQL LP V + L L L FN++ ++
Sbjct: 38 LDLRSTGLATLSDTAFRGLTKLTWLNLEYNQLQTLPPGVFDQLRELDRLSLQFNQLKSLP 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL+ L L N++ + D L NL L L +NEL VP L L++
Sbjct: 98 PRVFDSLTKLTYLTLSQNQLQSIPKGAFDKLTNLQTLYLRNNELQSVPHGAFDRLGKLQT 157
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L NP IL S I H K + D
Sbjct: 158 ITLYSNPWDCSNCTILYLSDWIQRHPKVVKYD 189
>gi|290978461|ref|XP_002671954.1| LRR domain-containing protein [Naegleria gruberi]
gi|284085527|gb|EFC39210.1| LRR domain-containing protein [Naegleria gruberi]
Length = 818
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
+HL L+LS N++ LP +F M L L+L Y L LP + LT+L L F
Sbjct: 381 FAHLTELNLSSNRMSKARLPEDIFSHMPHLQRLSLDYMGLKTLPKSINKLVELTYLSLSF 440
Query: 59 NKINNME---------NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNE-L 108
NK+N ND++ LT L LNL N+++ S + + +L L LS+N +
Sbjct: 441 NKLNTFNLLHGKDRHLNDFWPKLTNLEYLNLSGNRLNRFPSEICNCKSLEFLSLSNNRII 500
Query: 109 TDVPCELSSLFHLKSLFLGGNPI 131
++P E+ +L L LFL GN +
Sbjct: 501 NEIPKEIENLKKLAILFLNGNKV 523
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFNKI 61
L+ L LS+N+++++ +++ L L L+ N++T L + + + NLTHL LG N
Sbjct: 489 LEFLSLSNNRIINEIPKEIENLKKLAILFLNGNKVTALDINRNLEFLENLTHLELGHNPN 548
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ LTKL L L + IS +S ++G L NL LDL ++LT +P +S L +L
Sbjct: 549 IHVVPPPVYNLTKLESLCLSHLTISHLSDDIGKLRNLTHLDLYGSKLTGLPKGISQLINL 608
Query: 122 KSL 124
++L
Sbjct: 609 RNL 611
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 5 LKTLDLSHNK--LVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
L T +L H K ++D P + +L LNLS N+L P +C +CK+L L L N+
Sbjct: 443 LNTFNLLHGKDRHLNDFWP---KLTNLEYLNLSGNRLNRFPSEIC-NCKSLEFLSLSNNR 498
Query: 61 INNMENDYFLTLTKLSLLNLKNNKIS--EVSSNVGDLINLAILDLSDNE-LTDVPCELSS 117
I N L KL++L L NK++ +++ N+ L NL L+L N + VP + +
Sbjct: 499 IINEIPKEIENLKKLAILFLNGNKVTALDINRNLEFLENLTHLELGHNPNIHVVPPPVYN 558
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L L+SL L I + +DI
Sbjct: 559 LTKLESLCLSHLTISHLSDDI 579
>gi|427793601|gb|JAA62252.1| Putative g-protein coupled receptor, partial [Rhipicephalus
pulchellus]
Length = 902
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
+L+ L LSHN + S + F + +L L+L LT + + KNLTHL L N I
Sbjct: 275 NLRNLYLSHNPIESIASEAFRGLTALETLDLRSCSLTGIQEDLFVHPKNLTHLWLDGNDI 334
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ F L++L +L+L NK+ +S+ + L++L L+L+ N+L+DV ++L
Sbjct: 335 QTLQPRAFSPLSRLQVLSLTRNKLVRLSAHDFTGLVSLRTLNLAYNKLSDVTGAFTALGS 394
Query: 121 LKSLFLGGNPIKTVRND 137
L++L L GN + + +D
Sbjct: 395 LRTLDLEGNRLDVIPDD 411
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLP-VCTDCKNLTHLLLGFN 59
L+ L+TLDL L LF+ ++LT L L N + T+ P + L L L N
Sbjct: 297 LTALETLDLRSCSLTGIQEDLFVHPKNLTHLWLDGNDIQTLQPRAFSPLSRLQVLSLTRN 356
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE-LSSL 118
K+ + F L L LNL NK+S+V+ L +L LDL N L +P + L
Sbjct: 357 KLVRLSAHDFTGLVSLRTLNLAYNKLSDVTGAFTALGSLRTLDLEGNRLDVIPDDTFWPL 416
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHI 149
H++SL L N +T + + R I+HI
Sbjct: 417 RHVESLNLRNNAFRTASSALFA-PLRNITHI 446
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFNK 60
LS L+ L L+ NKLV S F + SL LNL+YN+L+ + T +L L L N+
Sbjct: 345 LSRLQVLSLTRNKLVRLSAHDFTGLVSLRTLNLAYNKLSDVTGAFTALGSLRTLDLEGNR 404
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-----CE 114
++ + +D F L + LNL+NN SS + L N+ + SD L CE
Sbjct: 405 LDVIPDDTFWPLRHVESLNLRNNAFRTASSALFAPLRNITHIYFSDFSLCSSALHVRVCE 464
Query: 115 -----LSSLFHL 121
+SSL HL
Sbjct: 465 PRGDGISSLAHL 476
>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 348
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ SLP I ++++L EL+L+ NQLT LPV + KNL L L N
Sbjct: 63 LHNLKELNLGRNQI--SSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGN 120
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + D+ L L +L L NK + + L NL LD S+N+L ++P +L L
Sbjct: 121 QISVLPKDFSLP-QNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQ 179
Query: 120 HLKSLFLGGNPIKTV 134
+L L+L GN +K +
Sbjct: 180 NLNILYLLGNELKVL 194
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 23 FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
F + RSL LNL+YN+ + P K L L L N+ + + L+ L+ L L+
Sbjct: 198 FSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIG-NLSNLNSLFLE 256
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
N++ ++ N+G L NL L L +N+LT +P E+ SL +LK L+L G
Sbjct: 257 ANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQG 303
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDL++N+L S LP+ I ++++L L L NQ+++LP + +NL L L N
Sbjct: 86 LQNLKELDLNNNQLTS--LPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQN 143
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K D L L L L+ N++ E+ +G L NL IL L NEL +P S
Sbjct: 144 KFRKFP-DEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFR 202
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 203 SLKSLNLNYNRFQVFPKELI 222
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLL 56
L +L+ LD S N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 154 QLQNLEWLDFSENQL--KELP--EKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 209
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+N+ + ++L KL L L N+ + + +G+L NL L L N L +P +
Sbjct: 210 NYNRFQVFPKE-LISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIG 268
Query: 117 SLFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L +L+SL+L N + T+ +I LQ+ K +
Sbjct: 269 KLQNLESLYLQENQLTTLPEEIGSLQNLKEL 299
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 71 TLTKL---SLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
T+TKL LNL N+IS + +G+L NL LDL++N+LT +P E+ +L +L+ L L
Sbjct: 59 TITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLY 118
Query: 128 GNPIKTVRNDI 138
GN I + D
Sbjct: 119 GNQISVLPKDF 129
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 44 VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDL 103
T NL L LG N+I+++ + L L L+L NN+++ + +G+L NL IL L
Sbjct: 59 TITKLHNLKELNLGRNQISSLPEEIG-ELQNLKELDLNNNQLTSLPVEIGNLKNLEILTL 117
Query: 104 SDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
N+++ +P + S +LK L+L N + ++ILQ
Sbjct: 118 YGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQ 154
>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L++L+L +N+L + LP I ++ L L L NQLT LP KNL L L
Sbjct: 83 QLKNLRSLELYNNQLTA--LPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNE 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + N+ L++L LNL N+++ + +G L L LDLS+N+LT +P E+ L
Sbjct: 141 NQITILPNEVG-NLSELEELNLSGNRLTNLPKEIGQLQKLRSLDLSNNQLTTLPKEIGHL 199
Query: 119 FHLKSLFLGGN 129
+L+ L L GN
Sbjct: 200 KNLRRLVLKGN 210
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 27 RSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
++L +L+L NQLT+LP +NL L LG N++ + N+ L L L+L N++
Sbjct: 16 KNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIG-QLKDLQELHLDGNQL 74
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + + +G L NL L+L +N+LT +P E+ L L+SL L N + T+ +I
Sbjct: 75 TILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEI 127
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
+L+ LDL N+L LP I +++L EL+L NQL +P K+L L L N+
Sbjct: 16 KNLQKLDLYSNQLTI--LPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQ 73
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + N+ L L L L NN+++ + + +G L +L L+L +N+LT +P E+ L +
Sbjct: 74 LTILPNEIG-QLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKN 132
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L N I + N++
Sbjct: 133 LQKLYLNENQITILPNEV 150
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 28/172 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ LDL N+L ++P I ++ L EL+L NQLT+LP KNL L L
Sbjct: 37 QLQNLEELDLGANQL--RTIPNEIGQLKDLQELHLDGNQLTILPNEIGQLKNLRSLELYN 94
Query: 59 NKINNMEND--YFLTLTKLSLLN------------LKN--------NKISEVSSNVGDLI 96
N++ + N+ L L L N LKN N+I+ + + VG+L
Sbjct: 95 NQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNENQITILPNEVGNLS 154
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRII 146
L L+LS N LT++P E+ L L+SL L N + T+ +I L++ +R++
Sbjct: 155 ELEELNLSGNRLTNLPKEIGQLQKLRSLDLSNNQLTTLPKEIGHLKNLRRLV 206
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L+L +N+++ + + +G L NL LDL N+L +P E+ L L+ L L GN + +
Sbjct: 18 LQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQLTIL 77
Query: 135 RNDILQ 140
N+I Q
Sbjct: 78 PNEIGQ 83
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NL LDL N+LT +P E+ L +L+ L LG N ++T+ N+I Q
Sbjct: 17 NLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQ 60
>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|253401398|gb|ACT31456.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|195402061|ref|XP_002059628.1| GJ14718 [Drosophila virilis]
gi|194147335|gb|EDW63050.1| GJ14718 [Drosophila virilis]
Length = 373
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 24 IDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+ +L ELNLS NQL P T+ + L +L LG NKI+ + D + + L +L+L
Sbjct: 126 VGTSTLKELNLSGNQLLHFPEQVTELRQLKYLYLGGNKISTISKDIW-KMQSLHVLSLGG 184
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
N ++EV VG L L L L DN + ++P ++ L +LKSL L N +K + DI+
Sbjct: 185 NLVNEVPEAVGSLSQLQALVLCDNLIENLPMSIARLKNLKSLLLHKNRLKHLPKDIV 241
>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
Length = 582
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ S
Sbjct: 203 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCM 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + LT L L+ N PV + + L + N+
Sbjct: 307 SELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 426
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N +K + + I
Sbjct: 427 LEVLILSNNLLKKLPHGI 444
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +LA L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEI 234
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ L L L NKL SLP + + +L L LS N LT LP D K L L L N
Sbjct: 122 LTQLTELYLYSNKL--QSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + L+ L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPSVVY-RLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPEEI 257
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + MLP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 105 LDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK + I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 356
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L +N+ +LP I +++L EL L+ NQ T+LP KNL L LG+N
Sbjct: 162 LQSLQKLTLGYNQF--KTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L +L LDL N+LT +P E+ L
Sbjct: 220 QLTTLPKE-IEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLK 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+LG N + + +I Q
Sbjct: 279 NLQTLYLGNNQLTALPKEIGQ 299
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L+L +N+L + LP I+ +++L L L+ NQLT LP +L L LG+N
Sbjct: 208 LKNLHVLNLGYNQLTT--LPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 266 QLTTLPKE-IGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQ 324
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 325 NLQTLYLRNN 334
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ LDL N+L + LP I +++L L L YNQLT LP KNL L L N
Sbjct: 93 LHDLQWLDLDFNQLTT--LPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDAN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L L L N+ + +G L NL L L+DN+ T +P + L
Sbjct: 151 QFTTLPKE-FEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLK 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L L LG N + T+ +I Q
Sbjct: 210 NLHVLNLGYNQLTTLPKEIEQ 230
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L L+L+ NQLT+LP +L L L FN++ + + L L L L N
Sbjct: 69 QLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKE-IGQLKNLLTLYLGYN 127
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+++ + +G L NL L+L N+ T +P E L L+ L LG N KT+ +I Q
Sbjct: 128 QLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQ 184
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL L++N+L + LP I + L L+L YNQLT LP KNL L LG N
Sbjct: 231 LKNLHTLYLNNNQLTA--LPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ + +G L NL L L +N+ +
Sbjct: 289 QLTALPKE-IGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFS 337
>gi|126570594|gb|ABO21236.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDL+ N+L + S F + LT LNL YNQL LP V L +L L N++ ++
Sbjct: 38 LDLNSNRLATLSDTAFRGLTKLTWLNLQYNQLQTLPPGVFDHLTELKNLYLAGNQLKSLP 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL++L L++N++ + D L NL L L DN+L VP L L++
Sbjct: 98 PRVFDSLTKLTILYLQDNQLQSIPEGAFDTLTNLQTLYLRDNKLQSVPHGAFDRLGKLQT 157
Query: 124 LFLGGNP 130
+FL NP
Sbjct: 158 IFLLSNP 164
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L+ L+L N+ +SD PL ++ +L L+L YNQ++ L T NL +L L +N+I
Sbjct: 3097 LTNLQVLNLYSNQ-ISDLSPL-AELTNLQYLHLYYNQISDLSPLTGLTNLHYLYLAYNQI 3154
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ + LT L L+L N+IS++S + +L NL L L N+++D+ L+ L +L
Sbjct: 3155 SDLSP--LIGLTNLQYLHLYYNQISDISP-LAELTNLQYLWLDSNQISDL-SPLAGLTNL 3210
Query: 122 KSLFLGGNPIK 132
L+L GNPI
Sbjct: 3211 WWLWLDGNPIS 3221
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L+ LDL++N+ +S+ PL + +L +L L YNQ++ L + NL +LLL +N+I
Sbjct: 2400 LTNLQELDLNNNQ-ISNINPL-AGLTNLQKLYLYYNQISDLSPLSGLTNLQYLLLEYNQI 2457
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+N+ LT L +L+L +N+IS++S + +L NL LDLS N+++D+ L L +L
Sbjct: 2458 SNISP--LAGLTNLQVLDLYSNQISDLSP-LAELTNLWYLDLSYNQISDL-SPLVGLVNL 2513
Query: 122 KSLFLGGNPI 131
+ L+L N I
Sbjct: 2514 QGLWLDNNQI 2523
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L+ LDL N+ +SD PL ++ +L L+LSYNQ++ L NL L LG+N+I
Sbjct: 3031 LTNLQELDLYSNQ-ISDLSPL-AELTNLWYLDLSYNQISDLSPLAGLTNLQDLYLGWNQI 3088
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N + LT L +LNL +N+IS++S + +L NL L L N+++D+ L+ L +L
Sbjct: 3089 NYLSP--LAGLTNLQVLNLYSNQISDLSP-LAELTNLQYLHLYYNQISDL-SPLTGLTNL 3144
Query: 122 KSLFLGGNPIK 132
L+L N I
Sbjct: 3145 HYLYLAYNQIS 3155
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 24/150 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L++LDL N+ +SD PL + +L EL L YNQ++ L + NL +L LG N+I
Sbjct: 2943 LTNLQSLDLDSNQ-ISDLSPL-AGLTNLQELYLYYNQISDLSPLAELTNLQYLDLGGNQI 3000
Query: 62 ---------NNMENDYFLT-----------LTKLSLLNLKNNKISEVSSNVGDLINLAIL 101
NN++ Y LT L L+L +N+IS++S + +L NL L
Sbjct: 3001 SDLSPLAGLNNLQELYLYWNQIGDLSPLAGLTNLQELDLYSNQISDLSP-LAELTNLWYL 3059
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
DLS N+++D+ L+ L +L+ L+LG N I
Sbjct: 3060 DLSYNQISDL-SPLAGLTNLQDLYLGWNQI 3088
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L+ LDL N+ +SD PL ++ +L L+LSYNQ++ L NL L L N+I
Sbjct: 2466 LTNLQVLDLYSNQ-ISDLSPL-AELTNLWYLDLSYNQISDLSPLVGLVNLQGLWLDNNQI 2523
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N++ + LT L L+L N+IS++S G L NL L L+ N+++D+ + L +L
Sbjct: 2524 NDLSP--LIGLTNLQYLHLYYNQISDLSPLTG-LTNLHYLYLAYNQISDL-SSVEGLTNL 2579
Query: 122 KSLFLGGNPIK 132
+ L+L NPI
Sbjct: 2580 QELYLDYNPIS 2590
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L+ L L H+ +SD PL M +L +NL NQ++ L NL +LLLG+NKI
Sbjct: 1208 LTNLQELYL-HSNQISDLSPL-AGMTNLRVINLKNNQISDLSPLAGLTNLQYLLLGWNKI 1265
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N++ LT L LNL N+IS++S G L NL L L +N ++ LS + L
Sbjct: 1266 NDISP--LAGLTNLWSLNLSYNQISDLSPLAG-LTNLWYLYLDNNPISYESMLLSQSWAL 1322
Query: 122 KSLFLGGNPIKTVRND 137
NP+ D
Sbjct: 1323 PWSTSSYNPLSPCYPD 1338
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL---------------------FIDMRSLTELNLSYNQLT 40
L++L++LDL N+ +SD PL + +L L+L NQ++
Sbjct: 2312 LTNLQSLDLDSNQ-ISDLSPLAGLTNLLELYLLDNMINYLSPLAGLTNLQYLDLGGNQIS 2370
Query: 41 MLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAI 100
L NL L LG+N+IN + LT L L+L NN+IS ++ G L NL
Sbjct: 2371 DLSPLAGLTNLQDLYLGWNQINYLSP--LAGLTNLQELDLNNNQISNINPLAG-LTNLQK 2427
Query: 101 LDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L N+++D+ LS L +L+ L L N I +
Sbjct: 2428 LYLYYNQISDL-SPLSGLTNLQYLLLEYNQISNI 2460
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 29 LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
L L LSYNQ++ L NL L LG N+I+++ + LT +S L L N IS +
Sbjct: 1706 LDSLYLSYNQISNLNPLAGLTNLKGLNLGSNQISDI--NPLAGLTNISWLFLFGNYISNI 1763
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
+ G L NL L L N+++D+ L++L + + LG N I
Sbjct: 1764 APLEG-LYNLRNLQLHYNQISDI-TPLAALIDIGGIALGSNQI 1804
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
++L +L LS+N+ +S+ PL + +L LNL NQ++ + N++ L L N I
Sbjct: 1703 FTNLDSLYLSYNQ-ISNLNPL-AGLTNLKGLNLGSNQISDINPLAGLTNISWLFLFGNYI 1760
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+N+ L L L L N+IS+++ + LI++ + L N++ D+ L+ L HL
Sbjct: 1761 SNIAP--LEGLYNLRNLQLHYNQISDITP-LAALIDIGGIALGSNQIVDI-TPLAGLTHL 1816
Query: 122 KSLFLGGNPIKTV 134
L L N I +
Sbjct: 1817 IGLELYHNQINNI 1829
>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
Length = 1573
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNK 60
L+++K LD+S KL S P + L L+LS N L T+ P N+THL + K
Sbjct: 482 LTNVKHLDMSECKLHSIP-PEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECK 540
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L +L LNL +N + + + +G L N+ LDLS ELT +P E+ L
Sbjct: 541 LRTLPPEVG-RLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQ 599
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
L+ L + NP++T+ +I+ + ISH+K S
Sbjct: 600 LERLNVSDNPLQTLPAEIVHLTN--ISHLKIS 629
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P + L L+LSYN L +LP ++ HL L K++ + + LT++ L+
Sbjct: 408 PEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRE-LGKLTQIEWLD 466
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L N + + + VG L N+ LD+S+ +L +P E+ L L+ L L NP+KT+ ++
Sbjct: 467 LSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVG 526
Query: 140 Q 140
Q
Sbjct: 527 Q 527
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+++K L+LS+ KL LP I ++ L L+L NQL LP N+ HL L
Sbjct: 206 LTNIKHLNLSYCKL--RILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSC 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT+L L L +N + + S +G L N+ DLS +L +P E+ L
Sbjct: 264 NMHTLPPEVG-RLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLT 322
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L NP++T+ DI Q
Sbjct: 323 QLEWLELSQNPLQTLPADIRQ 343
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 32/172 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLT---ELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L+ L+ L+LS N L +LP D+R LT L++SY QLT+LP
Sbjct: 321 LTQLEWLELSQNPL--QTLP--ADIRQLTCLKHLDMSYCQLTLLPREVGA---------- 366
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
LT+L L + N + ++++V +IN+ +LS +LT +P E+ L
Sbjct: 367 -------------LTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRL 413
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQE 170
HL+ L L NP++ + ++ Q S I H+ S H + G ++ E
Sbjct: 414 AHLRWLDLSYNPLQILPPNLGQLSS--IRHLDLSHCKLHTLPRELGKLTQIE 463
>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 533
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS+L+ L L +N+ + LP I + L LNL +NQLT LP + L L L N
Sbjct: 336 LSNLQRLHLEYNRFTT--LPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 393
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDLSDN+L +P E+ +L
Sbjct: 394 RLATLPKEIG-TLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQ 452
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N ++T+ +I Q
Sbjct: 453 RLEWLSLKNNQLRTLSQEIGQ 473
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I + +L +LN+ NQL LP +NL L L N
Sbjct: 198 LQNLKYLRLAYNQLTT--LPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANN 255
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L L L L++N+L +P E+ L
Sbjct: 256 RLVTLPKEIG-TLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQ 314
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N +++ +I
Sbjct: 315 NLKELILENNRLESFPKEI 333
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L +N+L + LP I +R L L L+ NQL LP +NL L L N
Sbjct: 382 LERLEWLNLYNNRLAT--LPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDN 439
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
++ + + TL +L L+LKNN++ +S +G L NL LDLS N T P E+
Sbjct: 440 QLVTLPEEIG-TLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEI 494
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 24 IDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+D+R+L +L NQLT+ P +NL +L L N++ + + TL KL L L
Sbjct: 38 MDVRNL---DLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE-IETLQKLKWLYLSE 93
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQ 140
N++ + +G L NL +LDL N+L +P E+ L L+ L L N + T+ +I LQ
Sbjct: 94 NQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQ 153
Query: 141 D 141
D
Sbjct: 154 D 154
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L +LP I +RSL L+L +NQL LP ++L L L N
Sbjct: 106 LQNLEVLDLYKNQL--RTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANN 163
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L L++ NN++ + +G L NL L L+ N+LT +P E+ L
Sbjct: 164 QLRILSKEIG-TLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLE 222
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L + N + T+ +I
Sbjct: 223 NLQDLNIFNNQLITLPQEI 241
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L LS N+L +LP I +++L L+L NQL LP ++L L L N
Sbjct: 83 LQKLKWLYLSENQL--KTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHN 140
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LNL NN++ +S +G L +L L + +N+L +P E+ L
Sbjct: 141 QLITLPQEIG-TLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQ 199
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + T+ +I
Sbjct: 200 NLKYLRLAYNQLTTLPKEI 218
>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
Length = 630
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L TL LS N L + DSL ++R L L+L +N+L +P V +LT L L F
Sbjct: 194 LVNLSTLALSENSLTGLPDSL---ANLRCLRVLDLRHNKLHDIPDVVYKLHSLTTLFLRF 250
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D LT L++L+L+ NKI E+ + +G L NL D+S N L +P E+ +
Sbjct: 251 NRIR-VVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNC 309
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L SL L N + + I Q
Sbjct: 310 VQLSSLDLQHNELLDIPESIGQ 331
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + L +LN+ N LT LP+ N+ L LG N++N
Sbjct: 408 SINLEHNQV--DKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNK 465
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D L L L +L L NN + V +++G+L L +LDL +N+L +P E+ L LK
Sbjct: 466 VPDDIAL-LQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEENKLETLPNEIGFLRDLKK 524
Query: 124 LFLGGN 129
L + N
Sbjct: 525 LIVQSN 530
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 52/185 (28%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNL---------- 51
L +LDL HN+L+ +P I +R+L L L YN+LT +P ++C ++
Sbjct: 311 QLSSLDLQHNELLD--IPESIGQLRNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAI 368
Query: 52 THLLLG--------------------------------------FNKINNMENDYFLTLT 73
+HL G N+++ + F
Sbjct: 369 SHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSINLEHNQVDKIPYGIFSRAK 428
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L+ LN+K N ++ + ++G +N+ L+L N+L VP +++ L L+ L L N +K
Sbjct: 429 HLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNKVPDDIALLQSLEVLILSNNNLKR 488
Query: 134 VRNDI 138
V N I
Sbjct: 489 VPNSI 493
>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
Length = 835
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 26/156 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +NKL +SLP I+ +++L L+L N+L LP + KNL HL LG+N
Sbjct: 89 LKNLQHLDLRNNKL--ESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYN 146
Query: 60 ----------KINNME-----NDYF-------LTLTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ N+E N+ F L KL +L L+ NK+ + +G++
Sbjct: 147 QFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKE 206
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L L L DNEL P ++ L L++L LG N ++
Sbjct: 207 LRELGLDDNELESFPTVIAELRKLQTLDLGYNEFES 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+ L+ L L N+L +S P I ++R L L+L YN+ P V KNL +L L N
Sbjct: 204 MKELRELGLDDNEL--ESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDN 261
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + D L L LNL+ NK+ + +G+L NL +L+L N L +P + L
Sbjct: 262 KLKLLP-DEIGELENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLK 320
Query: 120 HLKSLFLGGNPIKTV 134
+L L LG N I+T+
Sbjct: 321 NLGMLNLGNNKIETL 335
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 27/178 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+TLDL +N+ +S P + + +++L L L+ N+L +LP + +NL L L N
Sbjct: 227 LRKLQTLDLGYNEF--ESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGN 284
Query: 60 K-------INNMENDYFLTLTK---------------LSLLNLKNNKISEVSSNVGDLIN 97
K I +EN Y L L K L +LNL NNKI + + +G+L N
Sbjct: 285 KLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQN 344
Query: 98 LAILDLSDNELTDVPCELSSL-FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L LSDN+L +P E+ L L+ L L GN + V + +R + I R+
Sbjct: 345 LRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEVGDGERTVGRRELRAIFGDRV 402
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N L +LP I ++++L L+L N+L LP + KNL HL LG N
Sbjct: 66 LVNLEKLDLKGNNL--KALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L L+L N+ + + L NL L L++N+ P E++ L
Sbjct: 124 KLKALPYE-VEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELK 182
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L GN +K + ++I
Sbjct: 183 KLQILYLRGNKLKLLPDEI 201
>gi|283135157|ref|NP_796126.4| leucine-rich repeats and immunoglobulin-like domains protein 3
precursor [Mus musculus]
gi|73621177|sp|Q6P1C6.1|LRIG3_MOUSE RecName: Full=Leucine-rich repeats and immunoglobulin-like domains
protein 3; Short=LIG-3; Flags: Precursor
gi|40674791|gb|AAH65142.1| Leucine-rich repeats and immunoglobulin-like domains 3 [Mus
musculus]
Length = 1117
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C+ L+ L L FN
Sbjct: 262 LSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 322 HLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGA 381
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 382 FSGLDRLRQLILQGNRIRSI 401
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
LDLSHN+L ++SL E+ L+ N+L +P + + N+ L L N I+ +
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILP 138
Query: 67 DYFLTLTKLSLLNLKNNKISEV--------------------SSNVGDLINLA----ILD 102
+ L L+L NN ISE+ S G NLA +L
Sbjct: 139 EQLEAFQSLETLDLSNNNISELRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLK 198
Query: 103 LSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ N ++ +P ++ L L+ L L N IK V
Sbjct: 199 LNRNRISAIPPKMFKLPQLQHLELNRNKIKNV 230
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID--MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
LK L +++N+ VS P + D +L L L+ N+++ +P L HL L NK
Sbjct: 168 QLKYLYINNNR-VSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNK 226
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSL 118
I N++ F L L L ++ N ++++ L N+ +L L N LT++ L L
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGL 286
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I + D + +++ ++ SRLD
Sbjct: 287 LMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 327
>gi|410450856|ref|ZP_11304886.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410015399|gb|EKO77501.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 312
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ S LP I ++++L EL+LS N+LT LP+ + KNL L L N
Sbjct: 48 LRNLKELNLGRNQITS--LPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRN 105
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + +FL+L L +L L NK + + L NL LD ++N L ++P L L
Sbjct: 106 RISVLP-KHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L L+L GN +K +L S + +K+ L+Y+
Sbjct: 165 NLNILYLLGNELK-----VLPSSFSELQSLKSLNLNYN 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDLS N+L S LP+ I ++++L L L N++++LP +NL L L N
Sbjct: 71 LQNLKELDLSDNRLTS--LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L L L L+ N++ E+ +G L NL IL L NEL +P S L
Sbjct: 129 KFRKFPEE-ILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQ 187
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 188 SLKSLNLNYNRFQVFPKELI 207
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS NK + + +++L L+ + N+L LP +NL L L N+
Sbjct: 117 LQNLKILYLSQNKFRKFPEEI-LQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNE 175
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L L LNL N+ + L NL IL+L+ N+L +P E+ +L
Sbjct: 176 LKVLPSS-FSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDK 234
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFL GN +K + + I
Sbjct: 235 LRVLFLEGNQLKQIPSGI 252
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLLG 57
L +L+ LD + N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 140 LQNLEWLDFNENRL--KELP--ERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLN 195
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N+ + ++L L +L L N++ + +G L L +L L N+L +P +
Sbjct: 196 YNRFQVFPKE-LISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEK 254
Query: 118 LFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
L +L+SL+L N + T+ +I LQ+ K +
Sbjct: 255 LQNLESLYLQENQLTTLPEEIGFLQNLKEL 284
>gi|253401380|gb|ACT31450.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|41020787|gb|AAR98630.1| leucine-rich and immunoglobulin-like domains 3 [Mus musculus]
Length = 1117
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C+ L+ L L FN
Sbjct: 262 LSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 322 HLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGA 381
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 382 FSGLDRLRQLILQGNRIRSI 401
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
LDLSHN+L ++SL E+ L+ N+L +P + + N+ L L N I+ +
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILP 138
Query: 67 DYFLTLTKLSLLNLKNNKISEV--------------------SSNVGDLINLA----ILD 102
+ L L+L NN ISE+ S G NLA +L
Sbjct: 139 EQLEAFQSLETLDLSNNNISELRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLK 198
Query: 103 LSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ N ++ +P ++ L L+ L L N IK V
Sbjct: 199 LNRNRISAIPPKMFKLPQLQHLELNRNKIKNV 230
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID--MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
LK L +++N+ VS P + D +L L L+ N+++ +P L HL L NK
Sbjct: 168 QLKYLYINNNR-VSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNK 226
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSL 118
I N++ F L L L ++ N ++++ L N+ +L L N LT++ L L
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGL 286
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I + D + +++ ++ SRLD
Sbjct: 287 LMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 327
>gi|148692501|gb|EDL24448.1| leucine-rich repeats and immunoglobulin-like domains 3 [Mus
musculus]
Length = 1117
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C+ L+ L L FN
Sbjct: 262 LSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 322 HLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGA 381
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 382 FSGLDRLRQLILQGNRIRSI 401
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
LDLSHN+L ++SL E+ L+ N+L +P + + N+ L L N I+ +
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILP 138
Query: 67 DYFLTLTKLSLLNLKNNKISEV--------------------SSNVGDLINLA----ILD 102
+ L L+L NN ISE+ S G NLA +L
Sbjct: 139 EQLEAFQSLETLDLSNNNISELRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLK 198
Query: 103 LSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ N ++ +P ++ L L+ L L N IK V
Sbjct: 199 LNRNRISAIPPKMFKLPQLQHLELNRNKIKNV 230
Score = 42.4 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID--MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
LK L +++N+ VS P + D +L L L+ N+++ +P L HL L NK
Sbjct: 168 QLKYLYINNNR-VSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNK 226
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSL 118
I N++ F L L L ++ N ++++ L N+ +L L N LT++ L L
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGL 286
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I + D + +++ ++ SRLD
Sbjct: 287 LMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 327
>gi|253401392|gb|ACT31454.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|253401373|gb|ACT31448.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 400
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L LS N+L +LP I + +L L+LS NQLT LP KNL L LG N
Sbjct: 206 LKNLRELYLSSNQL--KTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L NN+++ + +G L NL L L N+ T +P E+ L
Sbjct: 264 LLTTLPKEVG-QLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQ 322
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ LFL N +KT+ N+I
Sbjct: 323 NLQVLFLNNNQLKTLPNEI 341
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TLDLS N L LP I +++L EL LS NQL LP +NL L L N
Sbjct: 183 LKNLQTLDLSKNILTI--LPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDN 240
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L N ++ + VG L NL LDLS+N LT +P E+ L
Sbjct: 241 QLTTLPNEIG-QLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLK 299
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+LG N + +I Q
Sbjct: 300 NLRELYLGTNQFTALPKEIRQ 320
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 26/140 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+TLDL HN+LV LP I+ +++L L LS NQL +LP +
Sbjct: 114 LINLQTLDLIHNQLVI--LPKEINQLQNLRVLGLSNNQLKILP---------------KE 156
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I +EN L L+L N++ + + +G L NL LDLS N LT +P E+ L +
Sbjct: 157 IGQLEN--------LQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKN 208
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L N +KT+ +I Q
Sbjct: 209 LRELYLSSNQLKTLPKEIGQ 228
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L L+LS N+LT LP KNL L LG N+ + + L L +L L NN
Sbjct: 274 QLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKE-IRQLQNLQVLFLNNN 332
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + + + L NL +LDL+DN+L +P E+ L +L+ L+L N
Sbjct: 333 QLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYN 378
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L L L NQLT LP N+I
Sbjct: 48 VRVLDLSEQKL--KTLPNEIGQLQNLQTLYLWNNQLTTLP---------------NEIGQ 90
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L LNL N+++ + + +G LINL LDL N+L +P E++ L +L+
Sbjct: 91 LKN--------LQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRV 142
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N +K + +I Q
Sbjct: 143 LGLSNNQLKILPKEIGQ 159
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP I +++L EL L N LT LP KNL L L N
Sbjct: 229 LENLQTLHLSDNQLTT--LPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+ + + + L NL +L L++N+L +P E+ L
Sbjct: 287 RLTTLPKEIG-QLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQ 345
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRI 145
+L+ L L N +KT+ +I LQ+ +R+
Sbjct: 346 NLQVLDLNDNQLKTLPKEIEKLQNLQRL 373
>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 405
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP + +L ELNLS NQLT LP +NL L L N
Sbjct: 139 LQNLQTLYLSSNQLTT--LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + +G L NL L+LSDN+LT +P E+ L
Sbjct: 197 QLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 255
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 256 NLHTLNLSGNQLTTLSIEI 274
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L TL+LS N+L + S+ + +++L +LNL NQLT L KNL L L +N+
Sbjct: 254 LQNLHTLNLSGNQLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 312
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L NL L L N L P E+ L +
Sbjct: 313 LVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 371
Query: 121 LKSLFLGG 128
L++L+LGG
Sbjct: 372 LQTLYLGG 379
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 231 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 289 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 348 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 382
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID---MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
L +L+TL+L N+L + LF + +++L LNLS NQLT LP+ +NL L L
Sbjct: 185 LQNLQTLNLKSNQLTT----LFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLS 240
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + + L L LNL N+++ +S +G L NL L+L N+LT + E+
Sbjct: 241 DNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 299
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L++L L N + + +I Q
Sbjct: 300 LKNLQTLSLSYNRLVILPKEIGQ 322
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP + KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 402
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L LP I +++L LNL +N+LT+LP +NL L L N
Sbjct: 93 LQNLQVLDLYSNELTI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +LNL NK++ + +G L NL IL+ N+LT P E+ L
Sbjct: 151 KLTILP-EKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+R +++Q
Sbjct: 210 KLQELNLGFNRLTTLREEVVQ 230
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +++L LN NQLT P + L L LGFN
Sbjct: 162 LQNLQVLNLDLNKLTI--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L +L+L +N ++ + +G L L L L N+LT +P E+ L
Sbjct: 220 RLTTLREE-VVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 278
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+LG NP++T+ +I Q K
Sbjct: 279 KLQELYLGNNPLRTLPKEIEQLQK 302
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +++L LNL N+LT+LP +NL L N
Sbjct: 139 LQNLQVLNLDLNKLTI--LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+++ + V L NL ILDL N LT +P E+ L
Sbjct: 197 QLTTFPKEIG-QLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLS 255
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+L GN + T+ +I Q K
Sbjct: 256 KLQKLYLYGNQLTTLPEEIGQLKK 279
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N L + LP I + L +L L NQLT LP K L L LG N
Sbjct: 231 LQNLQILDLISNPLTT--LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL L L+ N+I+ +G L NL L+L N+LT +P E+ L
Sbjct: 289 PLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + T+ ++ Q K
Sbjct: 348 NLQELNLEFNQLATLPKEVGQLQK 371
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L L N+++ + + +G L NL +LDL NELT +P E+ L +L+ L LG N +
Sbjct: 70 LQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRL 129
Query: 132 KTVRNDILQ 140
+ +++ Q
Sbjct: 130 TILPDEVGQ 138
>gi|320168558|gb|EFW45457.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 828
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGF 58
+L+ LK L L +N++ S S F+ + +LT+L L NQ++ +P D L +L L
Sbjct: 107 VLTALKDLRLDNNQITSISANAFVGLTALTQLLLYNNQISSIPASAWADLNTLINLSLYQ 166
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELS 116
N+I ++ + +LT L L L NN+I+ V +N L +L L + N +T + +
Sbjct: 167 NRITSINDASLTSLTALKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFA 226
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQD 141
SL L L+L N + ++ D D
Sbjct: 227 SLSALTCLYLSSNQLVSIPADAFTD 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ LKTL L +N++ S F + SLT L + N +T + LT L L N
Sbjct: 180 LTALKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSN 239
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
++ ++ D F LT L+LLNL++N+++ +S+N L+ L L L N++T + + +
Sbjct: 240 QLVSIPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTG 299
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L L L L N ++ + L
Sbjct: 300 LNALSFLDLTSNQFSSIPSSAL 321
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L TL L N+L S F + +L +L L NQ+T + LT LLL N
Sbjct: 84 LTALTTLHLYANQLTSIPAYNFTVLTALKDLRLDNNQITSISANAFVGLTALTQLLLYNN 143
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCE-LSS 117
+I+++ + L L L+L N+I+ ++ +++ L L L L +N++T VP +
Sbjct: 144 QISSIPASAWADLNTLINLSLYQNRITSINDASLTSLTALKTLILDNNQITSVPANAFAG 203
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L + NPI ++
Sbjct: 204 LTSLTYLTVQSNPITSI 220
>gi|74205668|dbj|BAE21119.1| unnamed protein product [Mus musculus]
Length = 976
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
HL LD+SHN+L + +R L +LNLS+NQL LP +L L + FN++
Sbjct: 36 HLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 95
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ D F L L L++ +N+++ + L L LD+S N L +P ++S+L LK
Sbjct: 96 HLP-DSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALK 154
Query: 123 SLFLGGNPIKTV 134
L+L G + T+
Sbjct: 155 ILWLSGAELGTL 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFID-MRSLTELNLSYNQL 39
L+HL+TLD+ HN+L + LP I +R+L L LS +L
Sbjct: 104 LNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 163
Query: 40 TMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
LP C + +L L+L N + + D F L +L +LNL +N E + + L
Sbjct: 164 GTLPRGFC-ELASLESLMLDNNGLQALP-DEFSRLQRLKMLNLSSNLFEEFPAALLPLAG 221
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L LS N+LT VP ++ L L +L+L N I+ + + I++
Sbjct: 222 LEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVE 264
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L LK L+LS N L + + + L EL LS NQLT +P + L L L N+
Sbjct: 196 LQRLKMLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNR 254
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
I + D + LT L L L+ N+I+ + N G L + + + DN L P E+
Sbjct: 255 IRYLP-DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 308
Score = 45.1 bits (105), Expect = 0.029, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 28 SLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
SL L L N+ LP V +LT L + N++ + + L +L LNL +N++
Sbjct: 12 SLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQL 71
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ + +G L +L LD+S N L +P S L HL++L
Sbjct: 72 PALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTL 110
>gi|124002317|ref|ZP_01687170.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992146|gb|EAY31514.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 418
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+K LDL+ ++ + +F ++L +L L+ +L LP K L L+L FN+I +
Sbjct: 47 VKILDLTSQRIQKIPVEIF-QFQNLEKLVLTNCRLKALPKGIAQLKKLQTLILAFNEITS 105
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + LT+L L+L NK++ + S + L NL L++ N+L + P L L LK
Sbjct: 106 LPKE-LGQLTQLQKLDLYQNKLTRLPSYISALKNLRDLNVGKNQLNEFPTVLKKLTQLKR 164
Query: 124 LFLGGNPIKTVRNDI--LQDSKRI 145
L L GN +K V DI LQ +KR+
Sbjct: 165 LDLNGNQLKQVPADIAWLQQNKRV 188
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+LP I ++ L L L++N++T LP L L L NK+ + + Y L L
Sbjct: 82 ALPKGIAQLKKLQTLILAFNEITSLPKELGQLTQLQKLDLYQNKLTRLPS-YISALKNLR 140
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI-KTVR 135
LN+ N+++E + + L L LDL+ N+L VP +++ L K +FL NP K R
Sbjct: 141 DLNVGKNQLNEFPTVLKKLTQLKRLDLNGNQLKQVPADIAWLQQNKRVFLARNPWTKWAR 200
Query: 136 NDI-LQDSKRI 145
+ L D RI
Sbjct: 201 KKLGLDDPARI 211
>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
Length = 524
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
+L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++ +
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 418
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L+ L
Sbjct: 419 EDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477
Query: 126 LGGNPIKTVRNDI 138
L N + T+ I
Sbjct: 478 LTNNQLSTLPRGI 490
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L L++ N+L S LPL F S+ ELNL+ NQLT +P + +L L+L N +
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L+L+ NK+ + + + L +L L L++N+L+ +P + L +L
Sbjct: 439 KLPHGLG-NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLT 497
Query: 123 SLFLGGN 129
L LG N
Sbjct: 498 HLGLGEN 504
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 29 LTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
L L L+ N + PV + + L + N+IN + F LS LN+K+N+++
Sbjct: 333 LNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT 392
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 393 SLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 405
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP + +L ELNLS NQLT LP +NL L L N
Sbjct: 139 LQNLQTLYLSSNQLTT--LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + +G L NL L+LSDN+LT +P E+ L
Sbjct: 197 QLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 255
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 256 NLHTLNLSGNQLTTLSIEI 274
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L TL+LS N+L + S+ + +++L +LNL NQLT L KNL L L +N+
Sbjct: 254 LQNLHTLNLSGNQLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 312
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L NL L L N L P E+ L +
Sbjct: 313 LVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 371
Query: 121 LKSLFLGG 128
L++L+LGG
Sbjct: 372 LQTLYLGG 379
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 231 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 289 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 348 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 382
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID---MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
L +L+TL+L N+L + LF + +++L LNLS NQLT LP+ +NL L L
Sbjct: 185 LQNLQTLNLKSNQLTT----LFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLS 240
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + + L L LNL N+++ +S +G L NL L+L N+LT + E+
Sbjct: 241 DNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 299
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L++L L N + + +I Q
Sbjct: 300 LKNLQTLSLSYNRLVILPKEIGQ 322
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP + KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|260806677|ref|XP_002598210.1| hypothetical protein BRAFLDRAFT_69561 [Branchiostoma floridae]
gi|229283482|gb|EEN54222.1| hypothetical protein BRAFLDRAFT_69561 [Branchiostoma floridae]
Length = 385
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L TLDL N+L FI + SL LNL YN ++ + + L LLLG N
Sbjct: 96 LINLTTLDLRWNRLTCLGAETFIGLGSLEILNLDYNDISTIEEETFSPTPQLVVLLLGSN 155
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDV-PCELSS 117
K+ ++ F LT+L +++L +NKISE+ DL L L L N +TD+ P S+
Sbjct: 156 KLTSIPQGSFRGLTQLQMIDLFSNKISEIQLGTFSDLPRLQHLYLYQNRITDIQPGTFSN 215
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
+ L+ L L N + VR+ L + R+
Sbjct: 216 MTQLQILSLFFNNMTVVRSGTLSNLPRL 243
>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
pulchellus]
Length = 626
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+TL LS N L + LP +++ L L++ +N+L +P V +LT L L FN
Sbjct: 190 LVHLETLALSENSLTT--LPDTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFN 247
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + ++ LT L++L+L+ NKI E+ + +G L L D S+N L +P E+ +
Sbjct: 248 RIREV-SENIANLTNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCV 306
Query: 120 HLKSL 124
L +L
Sbjct: 307 QLSTL 311
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LSHL+ L NKL + D L + + +L LS N LT LP + K L L +
Sbjct: 167 LSHLEEFYLYGNKLATLPDELGSLVHLETLA---LSENSLTTLPDTLANLKQLRVLDVRH 223
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+N + + LT L+ L L+ N+I EVS N+ +L NL +L L +N++ ++P + L
Sbjct: 224 NKLNEIP-EVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKL 282
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L + N +K + +I
Sbjct: 283 TQLVTFDASNNHLKHLPAEI 302
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
++++ HN++ +F + L++LN+ NQLT LP+ + L LG N++N +
Sbjct: 404 SINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLNKIP 463
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+D L L +L L NN + + + +G L L +LDL +N L +P E+ L +L+ L
Sbjct: 464 DD-IQYLVCLEVLILSNNLLRRLPATIGSLGALRVLDLEENRLDGLPNEIGHLKNLQRLV 522
Query: 126 LGGN 129
+ N
Sbjct: 523 VQSN 526
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 28/152 (18%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP------VCTDCKNLTHLLL 56
HL L++ N+L S LPL + ++ ELNL NQL +P VC + L++ LL
Sbjct: 425 HLSKLNMKENQLTS--LPLDLGTWTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLL 482
Query: 57 GF------------------NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
N+++ + N+ L L L +++N+++ + +G L+NL
Sbjct: 483 RRLPATIGSLGALRVLDLEENRLDGLPNEIG-HLKNLQRLVVQSNQLTNLPRAIGYLVNL 541
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L + +N L +P E+ +L +L+SL++ NP
Sbjct: 542 TYLSVGENNLNQIPEEIGTLENLESLYINDNP 573
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
++L TL LS N S ++T +N+ +NQ+ +P + + K+L+ L + N
Sbjct: 375 FTNLHTLTLSRNNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKEN 434
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ D T T + LNL N+++++ ++ L+ L +L LS+N L +P + SL
Sbjct: 435 QLTSLPLD-LGTWTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSLG 493
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
L+ L L N + + N+I L++ +R++
Sbjct: 494 ALRVLDLEENRLDGLPNEIGHLKNLQRLV 522
>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 448
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L LP I +++L LNL +N+LT+LP +NL L L N
Sbjct: 93 LQNLQVLDLYSNELTI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +LNL NK++ + +G L NL IL+ N+LT P E+ L
Sbjct: 151 KLTILP-EKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+R +++Q
Sbjct: 210 KLQELNLGFNRLTTLREEVVQ 230
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + LP I +++L L+L N+LT+LP +NL L LGFN
Sbjct: 70 LQNLQKLYLNYNQLTT--LPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L +LNL NK++ + +G L NL +L+L N+LT +P ++ L
Sbjct: 128 RLTILP-DEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L GN + T +I Q K
Sbjct: 187 NLQILNSQGNQLTTFPKEIGQLQK 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +++L LNL N+LT+LP +NL L N
Sbjct: 139 LQNLQVLNLDLNKLTI--LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+++ + V L NL ILDL N LT +P E+ L
Sbjct: 197 QLTTFPKEIG-QLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQ 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L G +KT+ I+Q
Sbjct: 256 KLQELNLYGIQLKTLPQGIIQ 276
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L++ L LP I S L +L L NQLT LP K L L LG N
Sbjct: 277 LQNLRGLNLNYTHLTI--LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL L L+ N+I+ +G L NL L+L N+LT +P E+ L
Sbjct: 335 PLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 393
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + T+ ++ Q K
Sbjct: 394 NLQELNLEFNQLATLPKEVGQLQK 417
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDL N L + LP I ++ L ELNL QL LP
Sbjct: 231 LQNLQILDLISNPLTT--LPKEIGQLQKLQELNLYGIQLKTLP----------------- 271
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L L LNL ++ + +G L L L L N+LT +P E+ L
Sbjct: 272 ------QGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKK 325
Query: 121 LKSLFLGGNPIKTVRNDILQDSK 143
L+ L+LG NP++T+ +I Q K
Sbjct: 326 LQELYLGNNPLRTLPKEIEQLQK 348
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L+ L L N+L + LP I ++ L EL L N L LP + L L L N
Sbjct: 300 LSKLQKLYLYGNQLTT--LPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 357
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L L LNL N+++ + +G L NL L+L N+L +P E+ L
Sbjct: 358 QITTFPKEIG-QLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ 416
Query: 120 HLKSLFLGGNPIKTVR 135
L+ L L NPI + +
Sbjct: 417 KLRKLNLYNNPIASEK 432
>gi|405965234|gb|EKC30629.1| hypothetical protein CGI_10009166 [Crassostrea gigas]
Length = 575
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINN 63
LK L L N L ++ P F ++ L E+NLS+N+L M+P T+ L +L L NKI +
Sbjct: 221 LKALQLRGNGL-ANLPPDFDSLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRH 279
Query: 64 MENDYFLTLTKLSLLNLKNNKISE------------VSSN------VGDLINLAILDLSD 105
+ + +F + KL +L+L+ N+I VS N VG + L L+ S
Sbjct: 280 VSH-HFASFAKLRVLHLQGNEIEHFAEGFVHMRYLNVSENRLYTLTVGRMKKLQHLNASF 338
Query: 106 NELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
N+L ++P L S L+ L L GN I+ + ++I+Q K
Sbjct: 339 NQLDNIPAGLLSCPKLEELKLNGNKIQVIPHEIIQLQK 376
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
F+ MR L N+S N+L L V K L HL FN+++N+ L+ KL L L
Sbjct: 307 FVHMRYL---NVSENRLYTLTVGR-MKKLQHLNASFNQLDNIPAG-LLSCPKLEELKLNG 361
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
NKI + + L L +LDL +NELT P + + L + GN IK
Sbjct: 362 NKIQVIPHEIIQLQKLRVLDLGNNELTCFPQVIDKMVKLDYFNVRGNFIK 411
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P+ + + L EL L + L P + L HL L N I + + +L +L+
Sbjct: 52 PVAKNQKGLLELKLCHYHLIEFPKDVLNFTGLQHLDLSHNVIQEIPGA-IGRMRRLKVLH 110
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +NKIS + + + I+L ++L+ NEL+ +P + +L L++ LG N +++ +DI
Sbjct: 111 LHDNKISRLPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLPHDI 169
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFN 59
L L+T L N+ +SLP I + +L L++ N L LP H L L N
Sbjct: 149 LKSLQTFRLGENRF--ESLPHDISLLGNLKYLDVHGNHLWYLPFALSLLGKLHYLNLADN 206
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K ++ +T L L L+ N ++ + + L L ++LS N+L +P +++L
Sbjct: 207 KFEHLPLP-VCHITSLKALQLRGNGLANLPPDFDSLKQLREVNLSFNKLQMIPSSITNLP 265
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
LK L L GN I+ V + +K + H++ + +++ +
Sbjct: 266 ELKYLNLAGNKIRHVSHHFASFAKLRVLHLQGNEIEHFAE 305
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L+ LDLSHN V +P I MR L L+L N+++ LP ++C
Sbjct: 83 LQHLDLSHN--VIQEIPGAIGRMRRLKVLHLHDNKISRLPETLSNC-------------- 126
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
L +NL N++S + N+G L +L L +N +P ++S L +LK
Sbjct: 127 ----------IHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLPHDISLLGNLK 176
Query: 123 SLFLGGN 129
L + GN
Sbjct: 177 YLDVHGN 183
>gi|119926372|dbj|BAF43225.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 217
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
++ LDL+ N++ + + +L EL L NQLT LP V NL HL LG N+++
Sbjct: 41 MQYLDLNSNQITKLEPRVLDSLVNLKELRLYSNQLTALPAGVFDHLANLQHLYLGDNQLS 100
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFH 120
+ F LT+L+ L L N++ + + V D L+NL L L N+L +P +L
Sbjct: 101 ALPVGVFDKLTQLTHLGLDGNQLKSIPAGVFDRLVNLQHLYLYQNQLKSIPRGAFDNLKS 160
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
L ++L NP +DIL S+ I H R +Y
Sbjct: 161 LTHIYLFNNPWDCACSDILYLSRWISQHPGVVRNNY 196
>gi|157134671|ref|XP_001663340.1| tartan [Aedes aegypti]
gi|108870385|gb|EAT34610.1| AAEL013159-PA [Aedes aegypti]
Length = 539
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 23/254 (9%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
+ L+ LDLS+N + + F+ R L+EL+L++N++ + T +LT L L N
Sbjct: 85 TELRFLDLSYNHVFNMPPKTFMYQRRLSELHLNHNKVGSISNKTLTGLDSLTILNLRGNF 144
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPC-ELSSL 118
++ + F+ L KL LNL N+I ++ D L+NL +L L DN L+ VP L
Sbjct: 145 LDELTEGIFVDLKKLEELNLGQNRIGKIDPKAFDGLVNLKVLYLDDNTLSAVPSPAFGPL 204
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ---NVDGGGMSSQESTSEI 175
L L+LG N T+ D + K SRLD NV S ++ +
Sbjct: 205 VALAELYLGINSFSTIAKDAF------VQLDKLSRLDLRGAALVNVTRETFSGLDALRVL 258
Query: 176 NIDKYKLDRTKTLTLCKVINIPE---------SVYMRGMSSQECTIEINI-DKYKLDRTK 225
++ +L+R T + ++ + E S+ M + +I+I KL R +
Sbjct: 259 DLSDNRLNRIPTTEMADLMRLEELSLGQNDFDSIPMGAFAGLANLRKIDISGSLKLSRIE 318
Query: 226 TLTLCKVINIPESV 239
T N+ E V
Sbjct: 319 TGAFSANANLEEIV 332
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML------------------- 42
L L L+L N L + +F+D++ L ELNL N++ +
Sbjct: 132 LDSLTILNLRGNFLDELTEGIFVDLKKLEELNLGQNRIGKIDPKAFDGLVNLKVLYLDDN 191
Query: 43 -------PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GD 94
P L L LG N + + D F+ L KLS L+L+ + V+
Sbjct: 192 TLSAVPSPAFGPLVALAELYLGINSFSTIAKDAFVQLDKLSRLDLRGAALVNVTRETFSG 251
Query: 95 LINLAILDLSDNELTDVP-CELSSLFHLKSLFLGGNPIKTV 134
L L +LDLSDN L +P E++ L L+ L LG N ++
Sbjct: 252 LDALRVLDLSDNRLNRIPTTEMADLMRLEELSLGQNDFDSI 292
>gi|320164790|gb|EFW41689.1| hypothetical protein CAOG_06821 [Capsaspora owczarzaki ATCC 30864]
Length = 762
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L LS L S F D+ +L L LS+NQ+T P T L+ L L N
Sbjct: 81 LTALTYLSLSDCYLTSIPSNAFADLPALISLFLSWNQITSFPADAFTGLTVLSALQLNSN 140
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SS 117
I ++ + F LT+L+ L+L NN+I+ VS+N L L L L++N T VP + +
Sbjct: 141 NITSIPDGAFTDLTQLTYLSLLNNQITTVSANAFTGLTALTYLYLTNNLFTTVPPSVFAG 200
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L LK+L L NPI ++ D
Sbjct: 201 LTALKTLMLSRNPITSISADAF 222
>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
Length = 937
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L L++S+N+L ++ P ++ SL ELN SYNQLT+LP + NL L L NK
Sbjct: 179 LKQLSKLNISYNQL-TNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNK 237
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + L L+ LNL N + + S +G+L L L LS N L ++P E+ L
Sbjct: 238 IEKLPRE-IGQLKNLNTLNLIYNNLYYLPSQIGELSQLIDLRLSHNYLDNIPSEIEKLRK 296
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L +L+LG N +K + I+Q
Sbjct: 297 LTTLYLGYNKLKILPTGIIQ 316
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+HLK LDL +NKL +LP I ++SL L L+ N L LP + L L L NK
Sbjct: 42 NHLKFLDLRNNKL--KTLPPEIGTLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENK 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++++ + F L L+ L L NN+++ + + G LINL L LS+N+LT +P E +L
Sbjct: 100 LSHLPQE-FGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKK 158
Query: 121 LKSLFLGGNPIKTVR---NDILQDSKRIISHIKTSRLDYHCQNVD 162
L L L N ++++ D+ Q SK IS+ + + L V+
Sbjct: 159 LSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVE 203
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L L L+ NKL LP F ++ LTEL L+ NQL LP NL L L N
Sbjct: 87 LSTLHRLSLTENKL--SHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNN 144
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ + + F L KLS L+LK+NK+ ++ + DL L+ L++S N+LT++P ++S +
Sbjct: 145 QLTLLPEE-FGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEV 202
>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
Length = 305
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP + +L ELNLS NQLT LP +NL L L N
Sbjct: 39 LQNLQTLYLSSNQLTT--LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN 96
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + +G L NL L+LSDN+LT +P E+ L
Sbjct: 97 QLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 155
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 156 NLHTLNLSGNQLTTLSIEI 174
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L TL+LS N+L + S+ + +++L +LNL NQLT L KNL L L +N+
Sbjct: 154 LQNLHTLNLSGNQLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 212
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L NL L L N L P E+ L +
Sbjct: 213 LVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 271
Query: 121 LKSLFLGG 128
L++L+LGG
Sbjct: 272 LQTLYLGG 279
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 131 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 188
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 189 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 247
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 248 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 282
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID---MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
L +L+TL+L N+L + LF + +++L LNLS NQLT LP+ +NL L L
Sbjct: 85 LQNLQTLNLKSNQLTT----LFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLS 140
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N++ + + L L LNL N+++ +S +G L NL L+L N+LT + E+
Sbjct: 141 DNQLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ 199
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L +L++L L N + + +I Q
Sbjct: 200 LKNLQTLSLSYNRLVILPKEIGQ 222
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 23/136 (16%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN---------------NMENDYF 69
+ +L L+L N+LT+LP+ +NL L L N++ N+ ++
Sbjct: 16 LENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQL 75
Query: 70 LTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
TL + L LNLK+N+++ + + L NL L+LSDN+LT +P E+ L +L
Sbjct: 76 TTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLH 135
Query: 123 SLFLGGNPIKTVRNDI 138
+L L N + T+ +I
Sbjct: 136 TLNLSDNQLTTLPIEI 151
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
N+++ + +G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 4 NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 55
>gi|358335194|dbj|GAA53704.1| leucine-rich repeat-containing protein 47 [Clonorchis sinensis]
Length = 734
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L+ LD+S N+L +F + SLT LNLS N+L +P +L L N++ ++
Sbjct: 280 LRFLDVSFNQLSELPEKIFTQLDSLTSLNLSGNELEKIPEVGKLLSLQELRSSKNRLQSL 339
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L L LL++ +NK++ V + L NL D SDN L VP L L L
Sbjct: 340 PDGIHL-LQSLILLDVSHNKLTSVPDEMNGLKNLKSADFSDNSLASVPATLHQCRKLHDL 398
Query: 125 FLGGNPIKTVR 135
L NP+K R
Sbjct: 399 RLQNNPLKDNR 409
>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 485
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L+H++L + LP I ++++L ELNL+ NQ T LP + + L L L ++
Sbjct: 246 LQKLQKLSLAHSRLTT--LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYS 303
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL N++ + +G L NL L L+ NELT +P E+ +L
Sbjct: 304 RLTTLPKEIG-KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQ 362
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L LG N + T+ I
Sbjct: 363 NLQELSLGSNQLTTLPEKI 381
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+TLDLSHN+L +LP I +++ L L+L+ NQL LP + + L L LG N
Sbjct: 154 LQKLQTLDLSHNRLT--TLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN 211
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+ + + +G+L L L L+ + LT +P E+ +L
Sbjct: 212 ELTTLPKEIG-NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQ 270
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N T+ +I
Sbjct: 271 NLQELNLNSNQFTTLPEEI 289
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 26/127 (20%)
Query: 13 NKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLT 71
NKL + LP I ++++L ELNL NQLT LP +I N++
Sbjct: 119 NKLTT--LPKEIGNLQNLQELNLEGNQLTTLP---------------EEIGNLQ------ 155
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
KL L+L +N+++ + +G+L L LDL+ N+L +P E+ L L++L LG N +
Sbjct: 156 --KLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNEL 213
Query: 132 KTVRNDI 138
T+ +I
Sbjct: 214 TTLPKEI 220
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L +LP I +++L L+L+ N+LT LP + +NL L LG N
Sbjct: 315 LQKLQKLNLYKNQL--KTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSN 372
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG-----------------------DLI 96
++ + + L KL L+L N++ + +G +L
Sbjct: 373 QLTTLP-EKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQ 431
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+L L+LS N L P E+ L LK L+LGGNP + + +Q
Sbjct: 432 SLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQ 475
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
G NK+ + + L L LNL+ N+++ + +G+L L LDLS N LT +P E+
Sbjct: 117 GGNKLTTLPKEIG-NLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIG 175
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L++L L N +KT+ +I + K H+ + L
Sbjct: 176 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNEL 213
>gi|418700552|ref|ZP_13261494.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410760453|gb|EKR26649.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 260
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+L + LP I+ ++ L LNL NQLT LP K L L L N
Sbjct: 108 LKELQELDLSRNQLTT--LPKEIEYLKDLESLNLINNQLTTLPKEIGQLKELQVLDLSNN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L +L L L+NN+++ +S + L L LDLS N+LT +P E+ +L
Sbjct: 166 QLTTLPNEIEF-LKRLQELYLRNNQLTALSKGIEYLKKLQKLDLSRNQLTTLPKEIETLK 224
Query: 120 HLKSLFLGGNPI 131
L+ LFL P+
Sbjct: 225 KLEELFLDDIPV 236
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 26/160 (16%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++TLDLS+NKL++ LP I ++ L L+LS NQL LP + L +L L N+
Sbjct: 40 TDVQTLDLSNNKLIT--LPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQ 97
Query: 61 INNMEND--YFLTLTKLSL--------------------LNLKNNKISEVSSNVGDLINL 98
+ + + Y L +L L LNL NN+++ + +G L L
Sbjct: 98 LTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQLKEL 157
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+LDLS+N+LT +P E+ L L+ L+L N + + I
Sbjct: 158 QVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTALSKGI 197
>gi|359685883|ref|ZP_09255884.1| hypothetical protein Lsan2_14973 [Leptospira santarosai str.
2000030832]
Length = 312
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L+L N++ S LP I ++++L EL+LS N+LT LP+ + KNL L L N
Sbjct: 48 LRNLKELNLGRNQITS--LPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRN 105
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + +FL+L L +L L NK + + L NL LD ++N L ++P L L
Sbjct: 106 RISILP-KHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L L+L GN +K +L S + +K+ L+Y+
Sbjct: 165 NLNILYLLGNELK-----VLPSSFSELQSLKSLNLNYN 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDLS N+L S LP+ I ++++L L L N++++LP +NL L L N
Sbjct: 71 LQNLKELDLSDNRLTS--LPMEIGNLKNLEILTLYRNRISILPKHFLSLQNLKILYLSQN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L L L L+ N++ E+ +G L NL IL L NEL +P S L
Sbjct: 129 KFRKFPEE-ILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQ 187
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LKSL L N + +++
Sbjct: 188 SLKSLNLNYNRFQVFPKELI 207
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +LK L LS NK + + +++L L+ + N+L LP +NL L L N+
Sbjct: 117 LQNLKILYLSQNKFRKFPEEI-LQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNE 175
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + F L L LNL N+ + L NL IL+L+ N+L +P E+ +L
Sbjct: 176 LKVLPSS-FSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDK 234
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ LFL GN +K + + I
Sbjct: 235 LRVLFLEGNQLKQIPSGI 252
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSY---NQLTMLPVC-TDCKNLTHLLLG 57
L +L+ LD + N+L LP + L LN+ Y N+L +LP ++ ++L L L
Sbjct: 140 LQNLEWLDFNENRL--KELP--ERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLN 195
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+N+ + ++L L +L L N++ + +G L L +L L N+L +P +
Sbjct: 196 YNRFQVFPKE-LISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEK 254
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L +L+SL+L N + T+ +I
Sbjct: 255 LQNLESLYLQENQLTTLPEEI 275
>gi|330799241|ref|XP_003287655.1| hypothetical protein DICPUDRAFT_54947 [Dictyostelium purpureum]
gi|325082333|gb|EGC35818.1| hypothetical protein DICPUDRAFT_54947 [Dictyostelium purpureum]
Length = 595
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLL---GF 58
L L+ L++++N+ +S+ P ++ L EL +S N LT LP + +LT L + G
Sbjct: 238 LVSLEKLEIANNR-ISELCPEIANLPKLEELIISGNPLTKLP--PNFSSLTQLEILDAGG 294
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ + D F T+TKL +N NNK+ E+ + +G L L IL+L DN+LTD+P + ++
Sbjct: 295 CQLVKLPED-FSTMTKLLEVNFGNNKLVELPNQIGRLTRLTILNLMDNKLTDLPLSIGNI 353
Query: 119 FHLKSLFLG----GNPIKT 133
L L G GNPI++
Sbjct: 354 PGLGKLGAGINIEGNPIQS 372
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 32 LNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN 91
L+L +NQ M P + K LT L L N I + + L L L +L++ N + + +
Sbjct: 176 LDLGFNQFKMFPSLSSFKKLTQLTLNGNFILTVPGEA-LDLPTLKVLSINGNHLISLPAE 234
Query: 92 VGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
V L++L L++++N ++++ E+++L L+ L + GNP+
Sbjct: 235 VCKLVSLEKLEIANNRISELCPEIANLPKLEELIISGNPL 274
>gi|320170060|gb|EFW46959.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 595
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L LDLS N++ F + +L EL+LS NQ+T + T L +L L N
Sbjct: 106 LTALLELDLSSNQISRIDSTEFTGLAALGELDLSNNQITSISASAFTSLTALYYLHLSNN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+I NM + F L L+ L L NN+I+ +S+N LI+L L L N++T +S
Sbjct: 166 QITNMSANAFTGLISLNFLYLSNNQITSISANAFTGLISLTTLQLHSNQITGFSATAFTS 225
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L SL L NPI T+ + +
Sbjct: 226 LTGLTSLTLNDNPITTLPPGLFKG 249
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINN 63
+L L N++ S S F + +LTEL L NQ+T +P T +LT LL L N+I+
Sbjct: 63 SLHLEENQITSISANAFTGLTALTELVLYGNQITSIPA-TAFASLTALLELDLSSNQISR 121
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSSLFHL 121
+++ F L L L+L NN+I+ +S++ L L L LS+N++T++ + L L
Sbjct: 122 IDSTEFTGLAALGELDLSNNQITSISASAFTSLTALYYLHLSNNQITNMSANAFTGLISL 181
Query: 122 KSLFLGGNPIKTVRNDIL 139
L+L N I ++ +
Sbjct: 182 NFLYLSNNQITSISANAF 199
>gi|78100432|gb|ABB21039.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 371
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL ++ NKL + + +F + +L EL L NQL LP V LT+L LG+N
Sbjct: 106 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ F LT L L L NN++ V D L L L L +N+L VP S
Sbjct: 166 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDS 225
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L LK L L NP N I+ +K + + GG + E T +
Sbjct: 226 LEKLKMLQLQENPWDCTCNGIIYMAKWLKKKADEGLGGVDTAGCEKGGKAVLEITEK 282
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
S +LT +P + D K L L NK++++ + F LTKL LL L +NK+ + + +
Sbjct: 46 SSKKLTAIPSNIPADTKKLD---LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI 102
Query: 93 -GDLINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
+L NL L ++DN+L +P + L +L L L N +K++
Sbjct: 103 FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSL 146
>gi|253401389|gb|ACT31453.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|253401377|gb|ACT31449.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
Length = 641
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFNK 60
LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L NK
Sbjct: 230 QLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLRENK 286
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+ +
Sbjct: 287 IREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSIGN 342
Query: 121 LKSLFLGG 128
LKSL G
Sbjct: 343 LKSLVRLG 350
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 419 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 477 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPHEIGLLHELQR 535
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 536 LILQTNQITMLPRSI 550
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L+ N L S LP + + L L+L +N+L +P V ++LT L L FN
Sbjct: 205 LVNLRNLALNENSLTS--LPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFN 262
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + +D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ +
Sbjct: 263 RITAVADD-LRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 321
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L N + + + I
Sbjct: 322 NLSALDLQHNELLDIPDSI 340
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ T P + N+ + L N+I+ + F L+ LN
Sbjct: 386 MLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 445
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 504
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P DC +T L L NKI + + L L L L N ++
Sbjct: 161 GIKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIG-CLVNLRNLALNENSLT 219
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 220 SLPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQ 273
>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
[Mus musculus]
Length = 582
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN++S + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLSTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLSTLPRGI 490
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|421114928|ref|ZP_15575342.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013649|gb|EKO71726.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 234
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L + LP I ++ L EL+LS NQLT LP K L L L N
Sbjct: 82 LQKLRYLYLSDNQLTT--LPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L +L L L+NN+++ + +G L L LDLS N+LT +P E+ +L
Sbjct: 140 QLTTLPNEIEF-LKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLK 198
Query: 120 HLKSLFLGGNPI 131
L+ LFL P+
Sbjct: 199 KLEELFLDDIPV 210
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++TLDLS+N+L++ LP I ++ L L+LS NQL LP + L +L L N+
Sbjct: 37 TDVQTLDLSNNQLIT--LPKEIGQLKGLEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQ 94
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L +L L+L N+++ + +G L L +LDLS+N+LT +P E+ L
Sbjct: 95 LTTLPKEIGY-LKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKR 153
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L N + T+ I
Sbjct: 154 LQELYLRNNQLTTLPKGI 171
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 26/139 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LS LK + H + ++ +L D+++L +LS NQL LP +I
Sbjct: 15 LSQLKAEEKGHYQNLTKALKNPTDVQTL---DLSNNQLITLP---------------KEI 56
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ +L+L+K N++ + + L L L LSDN+LT +P E+ L L
Sbjct: 57 GQLKGLEWLSLSK--------NQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKEL 108
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L L N + T+ +I Q
Sbjct: 109 QELDLSRNQLTTLPKEIGQ 127
>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
[Mus musculus]
Length = 524
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
+L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++ +
Sbjct: 359 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 418
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L+ L
Sbjct: 419 EDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477
Query: 126 LGGNPIKTVRNDI 138
L N + T+ I
Sbjct: 478 LTNNQLSTLPRGI 490
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L L++ N+L S LPL F S+ ELNL+ NQLT +P + +L L+L N +
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L+L+ NK+ + + + L +L L L++N+L+ +P + L +L
Sbjct: 439 KLPHGLG-NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLT 497
Query: 123 SLFLGGN 129
L LG N
Sbjct: 498 HLGLGEN 504
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|158292193|ref|XP_313752.4| AGAP004458-PA [Anopheles gambiae str. PEST]
gi|347971944|ref|XP_003436822.1| AGAP004458-PB [Anopheles gambiae str. PEST]
gi|347971946|ref|XP_003436823.1| AGAP004458-PC [Anopheles gambiae str. PEST]
gi|157017319|gb|EAA44590.4| AGAP004458-PA [Anopheles gambiae str. PEST]
gi|333469100|gb|EGK97180.1| AGAP004458-PB [Anopheles gambiae str. PEST]
gi|333469101|gb|EGK97181.1| AGAP004458-PC [Anopheles gambiae str. PEST]
Length = 356
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 4 HLKTLDLSHNKLVSDSLP---LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L TL + +N L SLP L L ELNLS N+ P + ++L +L LG N
Sbjct: 91 QLTTLIVKNNLLTDKSLPKSLLGAAGHGLKELNLSGNRFAHFPEQVIELRSLKYLYLGGN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I N+ D + L L LL+L N I+E+ VG L +L L L DN L +P ++ L
Sbjct: 151 QITNVSKDIW-KLQNLQLLSLGGNLITEIPETVGLLNHLHALVLCDNLLEALPASIARLV 209
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+LKSL L N ++ + +I+
Sbjct: 210 NLKSLLLHKNRLRHLPREII 229
>gi|167390691|ref|XP_001739456.1| leucine-rich repeat-containing protein 33 precursor [Entamoeba
dispar SAW760]
gi|165896835|gb|EDR24157.1| leucine-rich repeat-containing protein 33 precursor, putative
[Entamoeba dispar SAW760]
Length = 831
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +LK+LD+S N L S P+F LT+LN SYNQLT P +++ LLL N+I
Sbjct: 355 LKYLKSLDVSFNGLTSIP-PIFDHCSRLTKLNASYNQLTSFPPSRSLQHIQVLLLSGNQI 413
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + ND LT+LSLL+L NN + + + L L L LS N L++ P
Sbjct: 414 SQIPNDV-SRLTQLSLLHLANNSFIDFPTILSKLPKLQRLSLSMNSLSNFP 463
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 2 LSHLKTLDLSHNKLVS-DSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
+++L+ D+S NK+++ +PL +++ L L++S+N LT +P D C LT L +N
Sbjct: 332 INNLQLCDISKNKIITIPDIPL--ELKYLKSLDVSFNGLTSIPPIFDHCSRLTKLNASYN 389
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +L + +L L N+IS++ ++V L L++L L++N D P LS L
Sbjct: 390 QLTSFPPSR--SLQHIQVLLLSGNQISQIPNDVSRLTQLSLLHLANNSFIDFPTILSKLP 447
Query: 120 HLKSLFLGGN 129
L+ L L N
Sbjct: 448 KLQRLSLSMN 457
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L++L L L NK+ +LP SL ELNL N+++ +P+ + LTHL L N
Sbjct: 89 LLTNLYQLSLFANKI--HTLPY--TFGSLKELNLGSNEISEIPLGCNFSLLTHLDLSQNN 144
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ +E L L +NL+ NKI+ + +G L L +++S+N + +P ++ L
Sbjct: 145 LSQIEG--LTGLNNLIYINLECNKITSLPF-IGYLSKLESINISNNSIEVIPESITQLTC 201
Query: 121 LKSLFLGGNPIKTVRNDILQ-DSKRIIS 147
L S + NPIKT+ + S R IS
Sbjct: 202 LSSFNVASNPIKTLPTGFFKLKSLRFIS 229
>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
str. 56601]
gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
str. IPAV]
Length = 633
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L LP I +++L LNL NQL LPV +NL L L N
Sbjct: 164 LQNLEKLNLRKNRLTV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LNLK N+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 222 QLTTFPKEIG-QLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 280
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T +I Q
Sbjct: 281 KLRDLGLGRNQLTTFPKEIGQ 301
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+L P +NL L L N
Sbjct: 95 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL+ N+++ + +G L NL L+L DN+L +P E+ L
Sbjct: 153 QLATLPVEIG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 211
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L++L L N + T +I Q ++K +RL
Sbjct: 212 NLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRL 246
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I +++L L+L NQLT LP KNL +L LG N
Sbjct: 348 LKKLQDLSLGRNQLTT--LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN 405
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L NN+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 406 QLATFPKEIG-QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 464
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L L N + + +I Q K
Sbjct: 465 KLQDLGLSYNRLVILPKEIGQLEK 488
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS+N+LV LP I + L +L LSYN+L +LP KNL L L +N
Sbjct: 463 LKKLQDLGLSYNRLVI--LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 520
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L N+++ + + +G L NL LDL N+LT +P E+ L
Sbjct: 521 QFKTVSKEIGQLKNLLQLN-LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLK 579
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L LG N + T+ +I
Sbjct: 580 NLYNLGLGTNQLTTLPKEI 598
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + P I ++ L +L L NQLT P KNL L L +N
Sbjct: 256 LKNLENLELSENQLTT--FPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 313
Query: 60 KINNMENDYFL----------------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ + + L KL L+L N+++ + +G L N
Sbjct: 314 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKN 373
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDL N+LT +P E+ L +L +L LG N + T +I Q
Sbjct: 374 LYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQ 416
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +++L L LS NQLT P K L L LG N
Sbjct: 233 LENLQELNLKWNRLTA--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +L+L N+ VS +G L NL L+LS N+L +P E+ L
Sbjct: 291 QLTTFPKEIG-QLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLK 349
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 350 KLQDLSLGRNQLTTLPKEIGQ 370
>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +++L L L YNQLT LP KNL L L N
Sbjct: 68 LQNLKLLDLGHNQLT--ALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL +L L +++LT +P E+ L
Sbjct: 126 QLTTLPTE-IRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
+L L L N + + +I LQ+ +R +
Sbjct: 185 NLHELDLSHNQLTILPKEIGQLQNLQRFV 213
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L L HN+L LP I +++L L NQ T+LP +NL L L +N
Sbjct: 229 LQNLHELYLGHNQLTI--LPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL NN+++ + + L NL L+LS+N+L +P E+ L
Sbjct: 287 QLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 345
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL L N + T+ +I Q
Sbjct: 346 NLKSLDLSNNQLTTLPKEIEQ 366
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L EL LSYNQLT P + L L L N++ + + L L LNL N
Sbjct: 274 QLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEE-IEQLKNLKTLNLSEN 332
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + +G L NL LDLS+N+LT +P E+ L +L++L L N
Sbjct: 333 QLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 378
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 24 IDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+D+R L LS +LT LP +NL L LG N++ + + L L LL L
Sbjct: 46 LDVRVLI---LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG-QLKNLQLLILYY 101
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
N+++ + +G L NL +L L++N+LT +P E+ L +L+ L LG N + T+ +I
Sbjct: 102 NQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEI 157
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L EL+LS+NQLT+LP +NL +L N++ + + L L L L +N+
Sbjct: 183 LQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIG-KLQNLHELYLGHNQ 241
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ + +G L NL L +N+ T +P E+ L +L+ L+L N + T +I
Sbjct: 242 LTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI 295
>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 580
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDL N+L + LP I +++L +L+LS NQL LP +NL L L N
Sbjct: 150 LKELQDLDLRDNQLTT--LPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDN 207
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L +L L+L++N+++ + + +G L NL LDLS N+L +P E+ L
Sbjct: 208 QLKTLPKEIG-YLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQ 266
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L GN +KT+ +I
Sbjct: 267 NLQELYLYGNQLKTLPKEI 285
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + +P I ++ L ELNLS NQLT L + L L L N+
Sbjct: 59 LQNLQKLNLYNNQLTT--IPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQ 116
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L NN++ + +G L L LDL DN+LT +P E+ L +
Sbjct: 117 LKTLPKEIG-KLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQN 175
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L GN +KT+ +I
Sbjct: 176 LQKLDLSGNQLKTLPKEI 193
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 17/146 (11%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L+ L+L +N+L +LP I ++ L ELNLS+N+LT LP D + L +L
Sbjct: 403 QLQKLRVLELYNNQL--KTLPKEIGQLQKLQELNLSHNKLTTLP--KDIEKLQNL----- 453
Query: 60 KINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ N+ N+ TL K L +LNL +NK++ + ++G L NL L L++N+LT +P
Sbjct: 454 QVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLP 513
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDI 138
++ L +L+ L+L N + T+ +I
Sbjct: 514 KDIEKLQNLQELYLTNNQLTTLPKEI 539
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS+N+L +LP I ++ L L L NQL LP + L L L N
Sbjct: 381 LQNLQVLNLSNNQL--KTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHN 438
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + D L L +LNL NN++ + +G L NL +L+LS N+LT +P ++ L
Sbjct: 439 KLTTLPKD-IEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ 497
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ DI
Sbjct: 498 NLQELYLTNNQLTTLPKDI 516
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+L +LP I ++ L +L L NQL LP +NL L L N
Sbjct: 335 LKELQLLDLSGNQL--KTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNN 392
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L KL +L L NN++ + +G L L L+LS N+LT +P ++ L
Sbjct: 393 QLKTLPKDIG-QLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQ 451
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 452 NLQVLNLTNNQLKTLPKEIGQ 472
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ LDLS N+L +LP I +++L EL L NQL LP K L L L N
Sbjct: 242 LQNLQKLDLSGNQL--KTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDN 299
Query: 60 KINNMENDYFLTLTKL-SLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
K+ + + L KL +LL+L +N++ + ++G L L +LDLS N+L +P ++ L
Sbjct: 300 KLTTLPKEIG-QLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQL 358
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L+ L L N +KT+ DI
Sbjct: 359 QKLQDLELDSNQLKTLPKDI 378
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L L+ L+LSHNKL + LP I+ +++L LNL+ NQL LP +NL L L
Sbjct: 426 QLQKLQELNLSHNKLTT--LPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSH 483
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + D L L L L NN+++ + ++ L NL L L++N+LT +P E+ L
Sbjct: 484 NKLTTLPKDIG-KLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYL 542
Query: 119 FHLKSLFLGGNP 130
L+ L L P
Sbjct: 543 KGLEVLHLDDIP 554
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTEL-NLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L L+ L LS NKL + LP I ++ L L +L NQL LP K L L L
Sbjct: 288 LKELQVLHLSDNKLTT--LPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSG 345
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L KL L L +N++ + ++G L NL +L+LS+N+L +P ++ L
Sbjct: 346 NQLKTLPKDIG-QLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQL 404
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L+ L L N +KT+ +I Q K
Sbjct: 405 QKLRVLELYNNQLKTLPKEIGQLQK 429
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLL-LGF 58
L +L+ L L N+L +LP I ++ L L+LS N+LT LP + L LL LG
Sbjct: 265 LQNLQELYLYGNQL--KTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGD 322
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + D L +L LL+L N++ + ++G L L L+L N+L +P ++ L
Sbjct: 323 NQLKTLPKDIG-YLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKL 381
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N +KT+ DI Q K
Sbjct: 382 QNLQVLNLSNNQLKTLPKDIGQLQK 406
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + L+L NN+++ + ++G L NL L+L +N+LT +P E+ L L+ L L N +
Sbjct: 37 TDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLT 96
Query: 133 TV 134
T+
Sbjct: 97 TL 98
>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
Length = 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ LK L L+ +L SLP I + SL L L N LT +P +L L LG N
Sbjct: 154 LTSLKELSLAGTEL--RSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGN 211
Query: 60 -KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT L +L+L N+++ + +G L +L L L DN+ T VP E+ L
Sbjct: 212 WRLTSVPAEIG-QLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQL 270
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L LGGN + +V ++I Q
Sbjct: 271 TSLRELRLGGNQLTSVPSEIGQ 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N ++ S+P I + SL L+LS NQLT P +LT L L N
Sbjct: 200 LTSLRELHLGGNWRLT-SVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + LT L L L N+++ V S +G L +L L L DN LT VP E+ L
Sbjct: 259 QFTSVPAEIG-QLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLT 317
Query: 120 HLKSLFLGGNPIKTV 134
LK L+L N + +V
Sbjct: 318 SLKKLYLRDNLLTSV 332
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDLS N+L S P I + SLTEL L NQ T +P +L L LG N
Sbjct: 224 LTSLQVLDLSRNQLTSA--PAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGN 281
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ ++ ++ LT L L L +N+++ V + +G L +L L L DN LT VP
Sbjct: 282 QLTSVPSEIG-QLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVP 333
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
GF I + + L LS LNL +NK+ + + +G L +L L+LS N+LT VP E+
Sbjct: 71 GFGLIGALPAEIG-RLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIG 129
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQ 140
L L+ L L N + +V +I Q
Sbjct: 130 LLTSLRQLHLICNQLTSVPAEIGQ 153
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 24/123 (19%)
Query: 19 SLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSL 77
+LP I + +L+ LNL+ N+L LP +I LT L
Sbjct: 77 ALPAEIGRLNALSTLNLTSNKLRSLPA---------------EIGQ--------LTSLRR 113
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L L +N+++ V + +G L +L L L N+LT VP E+ L LK L L G ++++ +
Sbjct: 114 LELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAE 173
Query: 138 ILQ 140
I Q
Sbjct: 174 IWQ 176
>gi|284010615|dbj|BAI66787.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 250
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L+L +NKL S F ++SLT L+LSYN L LP V + KNL L + N++ +
Sbjct: 43 KKLELDYNKLSSLPSKAFHGLQSLTYLSLSYNDLKTLPAGVFDELKNLETLWIQQNQLQS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHL 121
+ + F LT+L +L L N++ V V D L L L L +N+L VP E SL L
Sbjct: 103 LPHGVFDKLTQLQVLTLSTNQLQSVPHGVFDKLTLLEKLYLENNQLRSVPEEAFDSLEKL 162
Query: 122 KSLFLGGNPIKTVRNDIL 139
K L L NP DIL
Sbjct: 163 KMLQLNDNPWDCSCRDIL 180
>gi|78100546|gb|ABB21095.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 347
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L LDLS+N+L + + +F + +L EL+L NQL LP + LT L L N
Sbjct: 82 LSSLTFLDLSYNQLQALPVGVFDHLVNLNELHLRQNQLKSLPQGIFDHLTKLTILWLSEN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
K+ ++ + F LT+L L+L+ N++ + V D L L L L +N+L VP +
Sbjct: 142 KLQSLPHGVFDELTELKTLHLRENQLQRLPEGVFDKLTELKTLTLYNNQLKRVPDKAFDK 201
Query: 118 LFHLKSLFLGGNPIKTVRNDIL------QDSKRIISHIKTSRLDYHCQNVDGGGMSSQES 171
L L+ + L GNP DIL ++ K +S+I+ + DGG + E
Sbjct: 202 LSKLEMIVLTGNPWDCSCRDILYLSNWIREKKGTVSNIEAAE-------CDGGTKAVLEI 254
Query: 172 TSE 174
T E
Sbjct: 255 TEE 257
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINNME 65
L+L +NKL S S F + SLT L+LSYNQL LPV NL L L N++ ++
Sbjct: 64 LELDYNKLSSLSAKAFHSLSSLTFLDLSYNQLQALPVGVFDHLVNLNELHLRQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F LTKL++L L NK+ + V D L L L L +N+L +P L LK+
Sbjct: 124 QGIFDHLTKLTILWLSENKLQSLPHGVFDELTELKTLHLRENQLQRLPEGVFDKLTELKT 183
Query: 124 LFLGGNPIKTV 134
L L N +K V
Sbjct: 184 LTLYNNQLKRV 194
>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 474
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I ++ L EL LS NQLT LP + +NL L L N
Sbjct: 323 LQNLQVLYLHSNQLTT--LPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSN 380
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L N+++ + ++G L NL LDLS+N+LT +P E+ L
Sbjct: 381 QLTTLPKEIG-QLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQ 439
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N +KT+ ++I
Sbjct: 440 NLQELYLSNNKLKTLPDEI 458
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 17/145 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDLSHNKL + LP I +++L L+LS NQLT LP D L L +
Sbjct: 231 LKELQDLDLSHNKLTA--LPKDIGKLQNLQVLDLSGNQLTTLP--KDIGYLKEL-----Q 281
Query: 61 INNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
+ ++E++ F TL K L +L L NN+++ + +G L NL +L L N+LT +P
Sbjct: 282 VLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPK 341
Query: 114 ELSSLFHLKSLFLGGNPIKTVRNDI 138
E+ L L+ L+L N + T+ +I
Sbjct: 342 EIGHLKGLQELYLSNNQLTTLPKEI 366
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL++N+L + LP I ++ L +L+LS+N+LT LP +NL L L N
Sbjct: 208 LQNLQVLDLTNNQLTT--LPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L +L +L+L++N+ + + +G L NL +L L +N+LT +P E+ L
Sbjct: 266 QLTTLPKDIG-YLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ +I
Sbjct: 325 NLQVLYLHSNQLTTLPKEI 343
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +N+L +LP I+ +++L LNL+ NQL LP +NL L LG N
Sbjct: 139 LKELQGLELYNNQL--KTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L+L NN+++ + ++G L L LDLS N+LT +P ++ L
Sbjct: 197 KLTILSKEIG-KLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQ 255
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L GN + T+ DI
Sbjct: 256 NLQVLDLSGNQLTTLPKDI 274
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS+N+L +LP I+ ++ L+L+YN T LP K L L L N
Sbjct: 93 LKELQKLDLSNNQL--KTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNN 150
Query: 60 KIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
++ N+ N+ TL K L +L L NNK++ +S +G L N
Sbjct: 151 QLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQN 210
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L +LDL++N+LT +P ++ L L+ L L N + + DI
Sbjct: 211 LQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDI 251
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 2 LSHLKTLD---LSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLL 56
+ HLK L LS+N+L + LP I ++++L L L NQLT LP +NL L L
Sbjct: 343 IGHLKGLQELYLSNNQLTT--LPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYL 400
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+N++ ++ D L L L+L NN+++ + + +G L NL L LS+N+L +P E+
Sbjct: 401 SYNQLTSLPKDIG-KLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIG 459
Query: 117 SLFHLKSLFLGGNPI 131
L L++L L P+
Sbjct: 460 KLQKLRTLDLDDIPL 474
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T + +L+L N+++ + ++G L L LDL N + +P E+ L L+ L L N +K
Sbjct: 48 TDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLK 107
Query: 133 TVRNDILQDSKRIISHI 149
T+ DI Q K ++ H+
Sbjct: 108 TLPKDIEQLQKPLVLHL 124
>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L LNLSYNQ+ LP + + L L L N
Sbjct: 111 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 168
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 169 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQ 227
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 228 NLQDLYLVSNQLTTIPKEIGQ 248
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + LP I +++L +L L NQLT +P +NL L LG N
Sbjct: 203 LQNLKVLFLNNNQLTT--LPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 260
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 261 QLTILPKEIG-KLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 319
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 320 NLQELYLSNNQLITIPKEIGQ 340
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT LP +NL L L N
Sbjct: 180 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSN 237
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 238 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQ 296
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 297 NLQELYLSNNQLTTIPKEIGQ 317
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+++ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 19 LKNLQMLDLSDNQIII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 76
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 77 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 135
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N IKT+ +I
Sbjct: 136 KLQWLNLSYNQIKTLPQEI 154
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS NQL +LP KNL L L N+I + + L L +L+L++N+++ +
Sbjct: 2 LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKE-IRQLKNLQMLDLRSNQLTILPK 60
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+G L NL L LS+N+LT P E+ L L+ L L N IKT+ +I
Sbjct: 61 EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 108
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 226 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNN 283
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 284 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 342
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 343 NLQTLYLRNN 352
>gi|390177718|ref|XP_003736467.1| GA26616, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859164|gb|EIM52540.1| GA26616, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 511
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 24/140 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L L+ L + HN ++ L F +LTEL+ S N ++ +P+ C+NL HL
Sbjct: 246 LLRKLQFLYIQHNDIME--LSDFEGNETLTELHASNNYISNIPISM-CENLPHL------ 296
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L++NKI+++ + L NL LD+S+N + +P LS+L H
Sbjct: 297 ---------------KVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAH 341
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L SL + GNPIK++R DILQ
Sbjct: 342 LISLQVEGNPIKSIRRDILQ 361
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L L L++S NKL SD + L LN+SYN+ + L P +D L L G N
Sbjct: 132 LEKLMRLNVSRNKL-SDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNS 190
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ L +L+ L L N I ++ ++ ++ +L LDL N+LT +P ++ L
Sbjct: 191 IKSLPGGIGF-LVRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRK 249
Query: 121 LKSLFLGGNPI 131
L+ L++ N I
Sbjct: 250 LQFLYIQHNDI 260
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 23 FIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
+ + LT L+LS N L+ + P + ++LT L+L N + + + L KL LN+
Sbjct: 83 WWNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAE-IGKLEKLMRLNVS 141
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NK+S++ + L L L++S NE +++ ++S L L+ L G N IK++ I
Sbjct: 142 RNKLSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGI 198
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 13 NKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTL 72
N+ ++S ++ S+ + + +NQ+ + + L+H+ KI N+++
Sbjct: 61 NEADAESKAATLEQLSIKDEDAWWNQVPLTNLDLSSNALSHI---SPKIENLQS------ 111
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
L++L L +N + + + +G L L L++S N+L+D+P EL SL L+ L + N
Sbjct: 112 --LTVLILHDNALVALPAEIGKLEKLMRLNVSRNKLSDLPRELYSLPELRHLNISYNEFS 169
Query: 133 TVRNDI 138
+ DI
Sbjct: 170 ELNPDI 175
>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 559
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L+L +N+L +LP I + +L LNL NQL LP +NL +L L
Sbjct: 381 QLENLQYLNLENNQL--KTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN 438
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L LNL+NN++ + + +G L NL L+L +N+L +P E+ L
Sbjct: 439 NQLKTLPNEIG-QLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRL 497
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
+LK L LGGN + T+ +I+
Sbjct: 498 QNLKVLNLGGNQLVTLPQEIV 518
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L+L +N+L +LP I + +L LNL NQL LP +NL +L L
Sbjct: 404 QLENLQYLNLENNQL--KTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN 461
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L LNL+NN++ + + +G L NL +L+L N+L +P E+ L
Sbjct: 462 NQLKTLPNEIG-RLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGL 520
Query: 119 FHLKSLFLGGNPI-----KTVRNDILQDSKRIISHIK 150
HL+ L L P +T+R +L D K + S K
Sbjct: 521 KHLQILKLKNIPALLSEKETIR-KLLPDVKVVYSKSK 556
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 47/186 (25%)
Query: 1 MLSHLKTLDLSHNKLVS---------------------DSLPLFI-DMRSLTELNLSYNQ 38
L L+ L L HN+L++ ++LP I +RSL L+L +NQ
Sbjct: 266 QLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQ 325
Query: 39 LTMLPV------------------------CTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
L LP +NL +L L N++ + N+ L
Sbjct: 326 LITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIG-QLEN 384
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L LNL+NN++ + + +G L NL L+L +N+L +P E+ L +L+ L L N +KT+
Sbjct: 385 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL 444
Query: 135 RNDILQ 140
N+I Q
Sbjct: 445 PNEIGQ 450
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 30/157 (19%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L+ LD+S+N L + LP I +RSL LNLS N L LP N
Sbjct: 197 QLENLQDLDVSNNHLTT--LPNEIGKLRSLKRLNLSNNLLITLP---------------N 239
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I ++N L LNL NN++ + +G L L L L N+L +P E+ +L
Sbjct: 240 EIGKLQN--------LEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRL 154
L+ L+L N ++T+ N+I L+ KR+ H++ ++L
Sbjct: 292 KLEYLYLKNNHLETLPNEIGKLRSLKRL--HLEHNQL 326
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL HN+L + P + ++ L L L+ NQL LP + L HL L N
Sbjct: 83 LQNLEELDLFHNRLTT--FPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNN 140
Query: 60 KINNME---------------NDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
+ + N++ +TL K L L L++N+++ + +G L N
Sbjct: 141 HLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLEN 200
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L LD+S+N LT +P E+ L LK L L N + T+ N+I
Sbjct: 201 LQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEI 241
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L +N L++ LP I +++L +L L NQLT LP +NL L + N
Sbjct: 152 LQRLKRLYLYNNHLMT--LPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNN 209
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + N+ L L LNL NN + + + +G L NL L+LS+N+L +P E+ L
Sbjct: 210 HLTTLPNEIG-KLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQ 268
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 269 ELEWLHLEHNQLITLPQEI 287
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L KL LNL NN+++ + + +G L NL LDL N LT P E+ L LK L+L N +
Sbjct: 60 LRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQL 119
Query: 132 KTVRNDI 138
T+ +I
Sbjct: 120 VTLPKEI 126
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +L+L +N+++ + + +G L L L+LS+N LT +P E+ L +L+ L L N + T
Sbjct: 40 VRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTF 99
Query: 135 RNDILQ 140
N+I++
Sbjct: 100 PNEIVR 105
>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
boliviensis]
Length = 582
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L++LS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSRLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +L L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPAEI 234
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
>gi|255074191|ref|XP_002500770.1| predicted protein [Micromonas sp. RCC299]
gi|226516033|gb|ACO62028.1| predicted protein [Micromonas sp. RCC299]
Length = 256
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 26/178 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L+ L+ L LS NKL S +P+ I + SLT L L N LT +P +L L LG
Sbjct: 54 LLTSLRALSLSSNKLTS--VPVEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGD 111
Query: 59 NKINNM--ENDYFLTLTKLSLLN--------------------LKNNKISEVSSNVGDLI 96
N++ ++ E +LT+LSL N L +N+++ V + +G L
Sbjct: 112 NRLTSVLAEIGQLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQLTSVPAEIGQLT 171
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L L L++N+LT +P E+ L L L+L GN + +V +I Q + + ++ +RL
Sbjct: 172 SLVKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTSVPAEIGQLTSLVRLYLGDNRL 229
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ L L N+L S L + SLTEL+L NQLT LP +LT LLL N+
Sbjct: 101 LASLEGLFLGDNRLTS-VLAEIGQLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQ 159
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT L L+L N+++ + + +G L +L L L N+LT VP E+ L
Sbjct: 160 LTSVPAEIG-QLTSLVKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTSVPAEIGQLTS 218
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L+LG N + +V I
Sbjct: 219 LVRLYLGDNRLTSVPAAI 236
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 33 NLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN 91
+L+ NQLT +P +L L L N++ + + L LT L L+L +NK++ V
Sbjct: 16 HLAENQLTSVPAEIGHLTSLERLELNHNELTRVPAEIGL-LTSLRALSLSSNKLTSVPVE 74
Query: 92 VGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+G L +L L L DN LT VP E+ L L+ LFLG N + +V +I Q
Sbjct: 75 IGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRLTSVLAEIGQ 123
>gi|418720608|ref|ZP_13279804.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410742882|gb|EKQ91627.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 265
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLSHNKL +LP I ++++L LNLS NQL LP + +NL +L L N
Sbjct: 121 LQKLQVLDLSHNKL--KTLPKEIGELQNLRYLNLSDNQLMTLPKEIGELQNLRYLDLSGN 178
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + L L L L N++ + +G+L NL L LS N+L +P E+ +L
Sbjct: 179 QLMTLPKEIW-NLQNLQELYLNGNQLMTLPKEIGELQNLQELHLSGNQLMTLPKEIWNLQ 237
Query: 120 HLKSLFLGGNPI 131
+L+ L L GN +
Sbjct: 238 NLRELHLSGNQL 249
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L L+ N+L +LP I ++++L L L YN+ LP + +NL L L NK
Sbjct: 55 VRALYLNGNEL--KTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQNLGLLDLEKNKFK 112
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + + L KL +L+L +NK+ + +G+L NL L+LSDN+L +P E+ L +L+
Sbjct: 113 TLPKEIW-NLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGELQNLR 171
Query: 123 SLFLGGNPIKTVRNDI 138
L L GN + T+ +I
Sbjct: 172 YLDLSGNQLMTLPKEI 187
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L L +NK +LP I ++++L L+L N+ LP + + L L L N
Sbjct: 75 LQNLDGLKLRYNKF--KTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLDLSHN 132
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L LNL +N++ + +G+L NL LDLS N+L +P E+ +L
Sbjct: 133 KLKTLPKEIG-ELQNLRYLNLSDNQLMTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQ 191
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L GN + T+ +I
Sbjct: 192 NLQELYLNGNQLMTLPKEI 210
>gi|270002906|gb|EEZ99353.1| tollo [Tribolium castaneum]
Length = 1212
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFN 59
L L LD+SHN++ +F D+ SL L L+ N + +P T NL L++ N
Sbjct: 329 LVRLVVLDISHNRITKLEQSVFRDLYSLQILRLNDNFIENIPENTFSALYNLHTLIISNN 388
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSL 118
KI +E+D F L LSLL+L NN+IS + + + +L L L+ N+L VP L S+
Sbjct: 389 KITKIESDTFNGLYVLSLLSLDNNRISWIHQEALKNCSSLQDLHLNGNKLVQVPEVLYSV 448
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
LK+L LG N I + N+ +D
Sbjct: 449 PMLKTLDLGENHIDVITNETFRD 471
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
S L+ L L+ NKLV L+ + L L+L N + ++ T D + L L N
Sbjct: 426 SSLQDLHLNGNKLVQVPEVLY-SVPMLKTLDLGENHIDVITNETFRDMNQMYGLRLTENN 484
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL-INLAILDLSDNELTDVPCELSSLF 119
I N+ F +T L +LNL NKI +V++ D +NL + L N LTD+ + L
Sbjct: 485 IGNISKGVFDKMTALKILNLSRNKIQKVAAGAFDANVNLQAIRLDGNYLTDIQELFAKLP 544
Query: 120 HLKSLFLGGNPIK 132
L L + N +K
Sbjct: 545 SLVWLNISDNQLK 557
>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
Length = 534
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L TL LS N L SLP ++R L L+L +N+L +P V +LTHL L FN
Sbjct: 98 LANLDTLALSENSL--QSLPDTLANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFN 155
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E+D L L++L+L+ NKI E+ S +G L NL+ D+S N L +P EL
Sbjct: 156 RIKVVEDD-IRNLKNLTMLSLRENKIKELPSGIGQLFNLSTFDVSHNHLEHLPEELGQCV 214
Query: 120 HLKSLFLGGN 129
+ SL L N
Sbjct: 215 QMNSLDLQHN 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
+++L HN++ +F LT+LN+ NQL+ LP+ N+ L LG N++ +
Sbjct: 312 SINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIGTWANMVELNLGTNQLMKIS 371
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D L L +L L NN + + + +G+L L LDL +N+L +P E+ L L L
Sbjct: 372 ED-IKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQEIGFLKELTKLV 430
Query: 126 LGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
+ N I ++ R I H+ S L Y
Sbjct: 431 VQSNQITSL--------PRAIGHL--SNLQY 451
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
D+ +L L LS N L LP + K L HL L NK+ ++ + L +L+ L +++N
Sbjct: 376 DLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQEIGF-LKELTKLVVQSN 434
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+I+ + +G L NL L +N LT++P E+ +L +L+SL++ NP
Sbjct: 435 QITSLPRAIGHLSNLQYLGAGENNLTNIPKEIGTLENLESLYINDNP 481
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+++ LS N S + S +NL +NQ+ +P + + LT L + N
Sbjct: 283 LTKLQSITLSRNAFASYPVGGPAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDN 342
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ D T + LNL N++ ++S ++ DL+NL +L LS+N L +P + +L
Sbjct: 343 QLSSLPLDIG-TWANMVELNLGTNQLMKISEDIKDLVNLEVLTLSNNSLKRLPATIGNLK 401
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N ++++ +I
Sbjct: 402 KLRHLDLEENKLESLPQEI 420
>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 291
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +LK L L+ N+L + LP I +++ L L+L+ NQL LP + + L L LG N
Sbjct: 144 LQNLKNLSLNGNELTT--LPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+ + + +G+L +L L+LS N LT P E+ L
Sbjct: 202 ELTTLPKEIG-NLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKLQ 260
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+LGGNP + + +Q
Sbjct: 261 KLKWLYLGGNPFLRSQKEKIQ 281
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++++L ELNL+ NQ T LP + + L L L ++++ + + L KL LNL N
Sbjct: 74 NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIG-KLQKLQKLNLYKN 132
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
++ + +G L NL L L+ NELT +P E+ +L L++L L N +KT+ +I + K
Sbjct: 133 QLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQK 192
Query: 144 RIISHIKTSRL 154
H+ + L
Sbjct: 193 LEALHLGNNEL 203
>gi|284010647|dbj|BAI66803.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 273
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L L+ N+L + +F + L EL L NQLT LP + NL L L N
Sbjct: 63 LTKLRLLYLNDNQLQTLPPGVFDQLVELDELYLYQNQLTSLPPGIFDHLVNLDKLYLNKN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
++ ++ F LTK++ L+L NNK+ + V D L L L+LS+N+L VP E S
Sbjct: 123 QLESLPQGIFDKLTKITYLDLDNNKLQSLPEGVFDNLAKLTRLELSNNQLPRVPEEAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L LK L L NP NDIL SK I
Sbjct: 183 LEKLKMLQLTNNPWDCSCNDILYLSKWI 210
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 52 THLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTD 110
T L L FN ++ + F LTKL LL L +N++ + V D L+ L L L N+LT
Sbjct: 43 TELRLNFNSLSKLSPKAFHRLTKLRLLYLNDNQLQTLPPGVFDQLVELDELYLYQNQLTS 102
Query: 111 VPCEL-SSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
+P + L +L L+L N ++++ I +I
Sbjct: 103 LPPGIFDHLVNLDKLYLNKNQLESLPQGIFDKLTKI 138
>gi|189234217|ref|XP_972104.2| PREDICTED: similar to vasorin [Tribolium castaneum]
Length = 1237
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFN 59
L L LD+SHN++ +F D+ SL L L+ N + +P T NL L++ N
Sbjct: 329 LVRLVVLDISHNRITKLEQSVFRDLYSLQILRLNDNFIENIPENTFSALYNLHTLIISNN 388
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCELSSL 118
KI +E+D F L LSLL+L NN+IS + + + +L L L+ N+L VP L S+
Sbjct: 389 KITKIESDTFNGLYVLSLLSLDNNRISWIHQEALKNCSSLQDLHLNGNKLVQVPEVLYSV 448
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
LK+L LG N I + N+ +D
Sbjct: 449 PMLKTLDLGENHIDVITNETFRD 471
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
S L+ L L+ NKLV L+ + L L+L N + ++ T D + L L N
Sbjct: 426 SSLQDLHLNGNKLVQVPEVLY-SVPMLKTLDLGENHIDVITNETFRDMNQMYGLRLTENN 484
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL-INLAILDLSDNELTDVPCELSSLF 119
I N+ F +T L +LNL NKI +V++ D +NL + L N LTD+ + L
Sbjct: 485 IGNISKGVFDKMTALKILNLSRNKIQKVAAGAFDANVNLQAIRLDGNYLTDIQELFAKLP 544
Query: 120 HLKSLFLGGNPIK 132
L L + N +K
Sbjct: 545 SLVWLNISDNQLK 557
>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 867
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 24/160 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+HL+ LDL +NKL + P ++ LT LNL+ NQL+ LP NL+ L L +NK
Sbjct: 38 LTHLRYLDLRNNKLTTLP-PQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNK 96
Query: 61 INNMENDY--------------FLT--------LTKLSLLNLKNNKISEVSSNVGDLINL 98
+ N+ + FL L ++ L+L N+ + + + LI+L
Sbjct: 97 LTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISL 156
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ DL++N+LT +P E+ L L L LG N + T+ +I
Sbjct: 157 SWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEI 196
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L DL++N+L + P ++SL +L+L YNQLT LP + LT L + +N++ +
Sbjct: 156 LSWWDLNNNQLTTLP-PEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLIS 214
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L L L NN+++ + +G L NL L+LS N+LT +P E+ L L
Sbjct: 215 LPPEIQF-LINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQ 273
Query: 124 LFLGGNPIKTVRNDI 138
L N I+T+ +I
Sbjct: 274 FRLSHNKIETLPPEI 288
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 32 LNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
L+LS+ +L LP + LTHL L NK+ + L KL+ LNL +N++S +
Sbjct: 21 LDLSFKKLETLP--PQIEQLTHLRYLDLRNNKLTTLPPQ-IGKLKKLTSLNLTDNQLSAL 77
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL+ L LS N+LT++P E+ L HL L+L N ++T+
Sbjct: 78 PPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETL 123
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L ++ L LS+N+ S P + SL+ +L+ NQLT LP K+L L LG+N+
Sbjct: 130 LVNINRLSLSYNQFTSLP-PQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQ 188
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L +L+ L++ N++ + + LINL L LS+N+L +P E+ L +
Sbjct: 189 LTTLPPE-IGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSN 247
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRI---ISHIKTSRL 154
L SL L N + ++ +I Q +K I +SH K L
Sbjct: 248 LISLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETL 284
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L L +LD+S+N+L+S + I++ SLT LS NQL LP NL L L +
Sbjct: 199 LYRLTSLDVSYNQLISLPPEIQFLINLDSLT---LSNNQLATLPPEIGFLSNLISLNLSY 255
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + LTKL L +NKI + + L L L L +N+L +P EL L
Sbjct: 256 NQLTSIPPE-IGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELIQL 314
Query: 119 FHLKSL 124
L
Sbjct: 315 VQFFKL 320
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L L+L+NNK++ + +G L L L+L+DN+L+ +P E+ L +L L L N +
Sbjct: 38 LTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKL 97
Query: 132 KTVRNDILQ 140
+ +I Q
Sbjct: 98 TNLPEEIGQ 106
>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 349
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +++L L L YNQLT LP KNL L L N
Sbjct: 68 LQNLKLLDLGHNQLT--ALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL +L L +++LT +P E+ L
Sbjct: 126 QLTTLPTE-IRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQ 184
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRII 146
+L L L N + + +I LQ+ +R +
Sbjct: 185 NLHELDLSHNQLTILPKEIGQLQNLQRFV 213
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L L HN+L LP I +++L L NQ T+LP +NL L L +N
Sbjct: 229 LQNLHELYLGHNQLTI--LPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL NN+++ + + L NL L+LS+N+L +P E+ L
Sbjct: 287 QLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 345
Query: 120 HLKS 123
+LKS
Sbjct: 346 NLKS 349
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L LDLSHN+L LP I +++L L NQLT+LP +NL L LG N
Sbjct: 183 LQNLHELDLSHNQLTI--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHN 240
Query: 60 KI----------NNME-----NDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
++ N++ N+ F L K L L L N+++ +G L
Sbjct: 241 QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQK 300
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L+L +N+LT +P E+ L +LK+L L N +KT+ +I Q
Sbjct: 301 LQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQ 343
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 24 IDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+D+R L LS +LT LP +NL L LG N++ + + L L LL L
Sbjct: 46 LDVRVLI---LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG-QLKNLQLLILYY 101
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
N+++ + +G L NL +L L++N+LT +P E+ L +L+ L LG N + T+ +I
Sbjct: 102 NQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEI 157
>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
Length = 869
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
++ L+ LD+S NKL S +P I ++ L+ L+ N LT LP + LTHL + N
Sbjct: 50 ITDLEFLDVSRNKLTS--IPEAIGRLQKLSRLDAYSNMLTCLPQAIGSLQKLTHLYVYRN 107
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ N+ L KL+LL++ +N+++EV S V L NL +L +S+N+L+ P + L
Sbjct: 108 KLANLPPG-IEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQ 166
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ LF+ N + V + +
Sbjct: 167 KLRKLFIKDNQLTEVPSGV 185
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLL--- 56
L +L+ L +NKL S P ++ L EL + NQLT +P VC+ NL L +
Sbjct: 294 LPNLEKLSAYNNKL-STFPPGVEKLQKLRELYIYDNQLTEVPSGVCS-LPNLEMLGVYNN 351
Query: 57 -------GFNKINNMENDYFL------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
G K+ + Y +L L +L++ NNK+S V L
Sbjct: 352 KLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQK 411
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L ++DN+LT+VP + SL +L+ L +G NPI+ + +D+
Sbjct: 412 LRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLPDDV 452
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L L L + NKL + LP I+ ++ LT L++ NQLT +P VC+ NL L +
Sbjct: 96 LQKLTHLYVYRNKLAN--LPPGIEKLQKLTLLSIYDNQLTEVPSGVCS-LPNLEVLSVSN 152
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK++ L KL L +K+N+++EV S V L NL +L++S+N+L+ P + L
Sbjct: 153 NKLSTFPPG-VEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKL 211
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L + N + V + +
Sbjct: 212 QKLKELGIYDNQLTEVPSGV 231
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+ L +S+NKL S P ++ L +L + NQLT +P VC+
Sbjct: 142 LPNLEVLSVSNNKL-STFPPGVEKLQKLRKLFIKDNQLTEVPSGVCS------------- 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
L L +LN+ NNK+S V L L L + DN+LT+VP + SL
Sbjct: 188 ------------LPNLEVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLP 235
Query: 120 HLKSLFLGGNPIKT 133
+L+ L + N + T
Sbjct: 236 NLEVLNVYNNKLST 249
>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
Length = 452
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++TLDL + KL + LP I +++L L+LS+N LT LP +NL L L FN +
Sbjct: 50 VRTLDLRYQKLTT--LPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L+L N+++ + +G L NL LDL+ N+LT +P E+ L +L+
Sbjct: 108 TLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 167 ELDLNSNKLTTLPKEIGQ 184
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LKTL+L +L + LP I ++++L LNL NQLT LP + +NL L+L N
Sbjct: 185 LQNLKTLNLIVTQLTT--LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L+L N+++ + +G L NL LDL N+LT +P E+ L
Sbjct: 243 RITALPKEIG-QLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 302 NLQELCLDENQLTTLPKEIEQ 322
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL+ NKL + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 162 LRNLQELDLNSNKLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 220 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 279 NLQRLDLHQNQLTTLPKEIGQ 299
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 70 LQNLQRLDLSFNSLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL+ N+LT +P E+ L
Sbjct: 128 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 187 NLKTLNLIVTQLTTLPKEI 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L+L NQLT LP +NL L L N
Sbjct: 231 LQNLEILVLRENRITA--LPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + + L NL +LDL +N+LT +P E+ L
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQ 368
>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 267
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L++N+L + LP I ++ L L L NQL +LP +NL L+L N
Sbjct: 71 LQKLEWLYLTNNQLAT--LPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDLSDN+L +P E+ +L
Sbjct: 129 RLATLPKEIG-TLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQ 187
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L L N ++T+ +I Q
Sbjct: 188 RLEWLSLKNNQLRTLPQEIGQ 208
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L +N+L + LP I +R L L L+ NQL LP +NL L L N
Sbjct: 117 LQNLKELILENNRLAT--LPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL +L L+LKNN++ + +G L NL LDLS N T P E+ L
Sbjct: 175 QLVTLPEEIG-TLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLK 233
Query: 120 HLKSLFLGGNP 130
HLK+L L P
Sbjct: 234 HLKTLVLQNIP 244
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
M LK L L++N+L + LP I +R L L L N+LT LP +NL L L
Sbjct: 1 MRPALKWLHLANNQLTT--LPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLEN 58
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + TL KL L L NN+++ + +G L L L L +N+L +P E+ L
Sbjct: 59 NRLITLPKEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKL 117
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHI 149
+LK L L N + T+ +I + R + H+
Sbjct: 118 QNLKELILENNRLATLPKEI--GTLRKLQHL 146
>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
Length = 641
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
+ LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 229 NQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITT--VADDLRQLVNLTMLSLREN 285
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
KI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P + +L
Sbjct: 286 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLK 344
Query: 120 HLKSLFLGGNPIKTV 134
L L L N + +V
Sbjct: 345 SLVRLGLRYNRLTSV 359
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L+ N L S DSL L L+L +N+L +P V ++LT L L F
Sbjct: 205 LVNLRNLALNENSLTSLPDSLQ---HCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 261
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + +D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ +
Sbjct: 262 NRITTVADD-LRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNC 320
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L +L L N + + + I
Sbjct: 321 VNLSALDLQHNELLDIPDSI 340
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 8 LDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N + +
Sbjct: 420 INLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 477
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+ L
Sbjct: 478 PDD-IMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRL 536
Query: 125 FLGGNPIKTVRNDILQDSKRIISHIKTS 152
L N I + I S+ ++H+ S
Sbjct: 537 ILQTNQITMLPRSIGHLSQ--LTHLSVS 562
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ T P + N+ ++ L N+I+ + F L+ LN
Sbjct: 386 MLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLN 445
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505
Query: 140 QDSKRIISHIKTSRLD 155
K I ++ +R++
Sbjct: 506 NLRKLRILDLEENRIE 521
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 161 GIKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIG-CLVNLRNLALNENSLT 219
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ L +LDL N+L ++P + L L +L+L N I TV +D+ Q
Sbjct: 220 SLPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDLRQ 273
>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
Length = 582
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN++S + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLSTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLSTLPRGI 490
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 378
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS +L +LP+ I +++L L L YNQLT+LP KNL L L N++
Sbjct: 48 EVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 62 NNMENDY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ N+ L L LL L +N+++ +S ++ L NL
Sbjct: 106 TTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 165
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 166 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 206
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 161 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 219 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 277
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 278 NLQTLDLRNNQLKTLPKEIEQ 298
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 230 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 288 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 346
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 347 NLQTLYLNNNQFSS------QEKKRI 366
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 92 LKNLQLLYLRSNRLTT--LPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 150 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 209 NLKVLFLNNNQITILPNEI 227
>gi|419761284|ref|ZP_14287540.1| internalin-A [Thermosipho africanus H17ap60334]
gi|407513590|gb|EKF48487.1| internalin-A [Thermosipho africanus H17ap60334]
Length = 598
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 9/123 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L+ L+LS NK +SD PL ++ L L+LSYN+++ + T+ NL L+L +N+I
Sbjct: 156 LPNLEELNLSVNK-ISDITPLS-NLTKLKRLDLSYNRISDISSLTNLTNLEELVLSYNEI 213
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ L L+ L+L NN+IS++S + DL NL +LDL++NE++D+ S LF+L
Sbjct: 214 SDISP--LANLPNLAGLDLSNNEISDISP-LKDLTNLELLDLAENEISDI----SLLFNL 266
Query: 122 KSL 124
SL
Sbjct: 267 TSL 269
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
S L+ LDLS N ++SD PL D+ +L ELNLS N+++ + ++ L L L +N+I
Sbjct: 134 FSKLRMLDLSSN-IISDISPLK-DLPNLEELNLSVNKISDITPLSNLTKLKRLDLSYNRI 191
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ + LT L L L N+IS++S + +L NLA LDLS+NE++D+ L L +L
Sbjct: 192 SDISS--LTNLTNLEELVLSYNEISDISP-LANLPNLAGLDLSNNEISDI-SPLKDLTNL 247
Query: 122 KSLFLGGNPIKTV 134
+ L L N I +
Sbjct: 248 ELLDLAENEISDI 260
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
S L+ LDLS N ++SD PL + L L+L N+++ + L L NK+
Sbjct: 451 FSKLRMLDLSSN-IISDISPL-AKLTKLRFLDLYANEVSDVSPLAKLTKLRVLDFSQNKV 508
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N++ + LTKL +L L+ NKI+++S + +L NL LDL+ N+++D+ L SL L
Sbjct: 509 NDISP--LVKLTKLRVLELQYNKINDISP-LSNLTNLIGLDLTGNKISDI-SPLFSLSGL 564
Query: 122 KSLFLG 127
K L+
Sbjct: 565 KGLYFS 570
>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
2000030832]
Length = 594
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++ L L+L N+LT LP+ + + L L L FN++ + + L KL L+L +N
Sbjct: 419 NLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIG-NLQKLRGLDLSDN 477
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+++ + +G+L L LDLSDN+LT +P E+ +L L+ L+L GN + T+ +I
Sbjct: 478 QLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEI 532
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDL +NKL + LP+ I +++ L L L++NQL LP + + L L L N
Sbjct: 420 LQKLRGLDLGNNKLTA--LPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDN 477
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L +N+++ + +G+L +L +L LS N+LT +P E+ +L
Sbjct: 478 QLTTIPEEIG-NLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQ 536
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+SL L NP+ + +I + + H+K RL+
Sbjct: 537 SLESLNLSNNPLTSFPEEIGK-----LQHLKWLRLE 567
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L L+HN+L + LP I ++ L LNL NQ T LP + + L L LG N
Sbjct: 144 LQKLQKLSLAHNQLTT--LPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L NN++ + +G L NL L L++N+L +P E+ L
Sbjct: 202 QFTTLPKE-IKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQ 260
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ +I
Sbjct: 261 NLQGLHLNNNQLTTLPKEI 279
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L+L N+ + LP I+ ++ L EL+L NQ T LP +NL L L N
Sbjct: 167 LQKLKVLNLDGNQFTT--LPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NN++ + +G L NL L L++N+LT +P E+ L
Sbjct: 225 QLKTLPKEIG-KLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQ 283
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ +I
Sbjct: 284 NLQGLGLHYNQLTTLPKEI 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + LP I +++L L L YNQLT LP + L L N
Sbjct: 259 LQNLQGLHLNNNQLTT--LPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSN 316
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +N+++ +S +G L L L LS N+LT +P E+ L
Sbjct: 317 ELTTLPKE-IKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQ 375
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LG N + T+ +I
Sbjct: 376 KLQELHLGDNQLTTLPEEI 394
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L +LP I +++L L+L+ NQLT LP +NL L L +N
Sbjct: 236 LQNLQGLHLNNNQL--KTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYN 293
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL +L+ +N+++ + + L NL LDL N+LT + E+ L
Sbjct: 294 QLTTLPKEIG-KLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQ 352
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 353 KLQELHLSSNQLTTLPKEI 371
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++++L +L+L NQLT LP + L L L +N + + + L KL L L NN
Sbjct: 74 NLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIG-KLQKLDDLRLPNN 132
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+++ + L L L L+ N+LT +P E+ L LK L L GN T+ +I
Sbjct: 133 QLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEI 187
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L + LP I ++ L L+ N+LT LP +NL L L N
Sbjct: 282 LQNLQGLGLHYNQLTT--LPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSN 339
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
++ + + L KL L+L +N+++ + +G L L L L DN+LT +P E+
Sbjct: 340 QLTTLSKEIG-KLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIG 395
>gi|397467362|ref|XP_003805390.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
paniscus]
Length = 995
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
HL LD+SHN+L + + +R L +LN+S+NQL LP +L L + FN++
Sbjct: 55 HLTELDVSHNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLA 114
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ D L++L L++ +N+++ + L L LD+S N L +P ++S+L LK
Sbjct: 115 HLP-DSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALK 173
Query: 123 SLFLGGNPIKTV 134
L+L G + T+
Sbjct: 174 ILWLSGAELGTL 185
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFID-MRSLTELNLSYNQL 39
LS L+TLD+ HN+L + LP I +R+L L LS +L
Sbjct: 123 LSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 182
Query: 40 TMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
LP + +L L+L N + + F L +L +LNL +N E + + L L
Sbjct: 183 GTLPAGFCELASLESLMLDNNGLQALPAQ-FSCLQRLKMLNLSSNLFEEFPAALLPLAGL 241
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LS N+LT VP +S L L +L+L N I+ + + I++
Sbjct: 242 EELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVE 283
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L LK L+LS N L + + + L EL LS NQLT +P + + L L L N+
Sbjct: 215 LQRLKMLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNR 273
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
I + D + LT L L L+ N+I+ + + G L + + + DN L P E+
Sbjct: 274 IRYLP-DSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEV 327
Score = 43.1 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 28 SLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
SL L L N+ LP V +LT L + N++ + + L +L LN+ +N++
Sbjct: 31 SLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNVSHNQL 90
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ + +G L +L LD+S N L +P LS L L++L
Sbjct: 91 PALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTL 129
>gi|350425520|ref|XP_003494147.1| PREDICTED: leucine-rich repeat-containing protein 47-like [Bombus
impatiens]
Length = 531
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L LK LD S NKL S LP I + LT +N S N L LP LT L L N+
Sbjct: 90 LGKLKVLDCSRNKLTS--LPDEIGKLPQLTTMNFSSNLLRSLPTQIGNIKLTILNLSNNQ 147
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L+ + + N+I E+ + L +L I++++DN ++ +P E++
Sbjct: 148 FEAFPDVCYPELIHLTEIYVNGNQIKEIPVTINQLASLKIINVADNLISVIPGEVADCNK 207
Query: 121 LKSLFLGGNPIKTVRNDILQDS---KRIISHIKTSRLDYHCQNVDGG 164
LK L+L GN + R L D K+II ++K HC DG
Sbjct: 208 LKELYLKGNTLTDKRLSKLVDQCHNKQIIEYVK-----LHCPRQDGS 249
>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 631
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L LP I +++L LNL NQL LPV +NL L L N
Sbjct: 162 LQNLEKLNLRKNRLTV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LNLK N+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 220 QLTTFPKEIG-QLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T +I Q
Sbjct: 279 KLQDLGLGRNQLTTFPKEIGQ 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+L P +NL L L N
Sbjct: 93 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL+ N+++ + +G L NL L+L DN+L +P E+ L
Sbjct: 151 QLATLPVEIG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L++L L N + T +I Q ++K +RL
Sbjct: 210 NLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRL 244
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I +++L L+L NQLT LP KNL +L LG N
Sbjct: 346 LKKLQDLSLGRNQLTT--LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN 403
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L NN+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 404 QLTTFPKEIG-QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 462
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L L N + + +I Q K
Sbjct: 463 KLQDLGLSYNRLVILPKEIGQLEK 486
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS+N+LV LP I + L +L LSYN+L +LP KNL L L +N
Sbjct: 461 LKKLQDLGLSYNRLVI--LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 518
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L N+++ + + +G L NL LDL N+LT +P E+ L
Sbjct: 519 QFKTVSKEIGQLKNLLQLN-LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLK 577
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L LG N + T+ +I
Sbjct: 578 NLYNLGLGTNQLTTLPKEI 596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + P I ++ L +L L NQLT P KNL L L +N
Sbjct: 254 LKNLENLELSENQLTT--FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 311
Query: 60 KINNMENDYFL----------------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ + + L KL L+L N+++ + +G L N
Sbjct: 312 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKN 371
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDL N+LT +P E+ L +L +L LG N + T +I Q
Sbjct: 372 LYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQ 414
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +++L L LS NQLT P K L L LG N
Sbjct: 231 LENLQELNLKWNRLTA--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +L+L N+ VS +G L NL L+LS N+L +P E+ L
Sbjct: 289 QLTTFPKEIG-QLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLK 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 348 KLQDLSLGRNQLTTLPKEIGQ 368
>gi|425436884|ref|ZP_18817314.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9432]
gi|389678313|emb|CCH92805.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9432]
Length = 806
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P + SL L+LSYNQ++ +P +L +L L N+I+ + + LT L L+
Sbjct: 33 PEIAQLTSLQSLDLSYNQISEIPEALAQLTSLQYLDLYNNQISEIP-EALAQLTSLQYLH 91
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L NN+I E+ + L +L LDLSDN+++++P L+ L L+ L+L N I +
Sbjct: 92 LSNNQIREIPEALAHLTSLQDLDLSDNQISEIPEALAHLNSLQRLYLYNNQISEI 146
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L++LDLS+N+ +S+ + SL L+L NQ++ +P +L +L L N
Sbjct: 37 QLTSLQSLDLSYNQ-ISEIPEALAQLTSLQYLDLYNNQISEIPEALAQLTSLQYLHLSNN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L L+L +N+ISE+ + L +L L L +N+++++P L+ L
Sbjct: 96 QIREIP-EALAHLTSLQDLDLSDNQISEIPEALAHLNSLQRLYLYNNQISEIPEALAHLV 154
Query: 120 HLKSLFLGGNPIKTVRNDILQDS 142
+LK L L NPI V +I++
Sbjct: 155 NLKRLVLENNPITNVPPEIIRQG 177
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ LDL +N+ +S+ + SL L+LS NQ+ +P +L L L N
Sbjct: 60 QLTSLQYLDLYNNQ-ISEIPEALAQLTSLQYLHLSNNQIREIPEALAHLTSLQDLDLSDN 118
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+ + + L L L L NN+ISE+ + L+NL L L +N +T+VP E+
Sbjct: 119 QISEIP-EALAHLNSLQRLYLYNNQISEIPEALAHLVNLKRLVLENNPITNVPPEIIRQG 177
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHI-----------KTSRLDYHCQNVDGGGMSS 168
+++ GNP + KR ++ + KTS L N G
Sbjct: 178 WGETILHDGNPQAIFSYLKDKGEKRPLNELKVLLVGEGDVGKTSLLKRLLHNTFNSG--- 234
Query: 169 QESTSEINIDKYKLDRTKTLTL 190
+ T INI++++L + + L
Sbjct: 235 EPKTPGINIERWQLPQKPDIRL 256
>gi|119926452|dbj|BAF43252.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 236
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 22 LFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+F + LT LNL NQLT LP V NL L L N++ ++ F LT+L+ L
Sbjct: 45 VFDSLTQLTNLNLHTNQLTALPEGVFDRLANLRELRLWGNQLASLPAGVFDKLTQLTHLG 104
Query: 80 LKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKSLFLGGNPIKTVRND 137
L N+++ V + V D L+NL +L L N+LT++P + L LK L L GN +K++ +
Sbjct: 105 LDQNQLTSVPAGVFDRLVNLEVLGLCCNKLTELPSSAFAKLTRLKHLGLDGNQLKSIPDG 164
Query: 138 ILQDSKRIISHIKTSRLDYHCQNVD 162
++H+ + CQ D
Sbjct: 165 AFARLSS-LTHVWLHTNPWDCQCTD 188
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L N+L + +F + +L EL L NQL LP V LTHL L N
Sbjct: 49 LTQLTNLNLHTNQLTALPEGVFDRLANLRELRLWGNQLASLPAGVFDKLTQLTHLGLDQN 108
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVP----CE 114
++ ++ F L L +L L NK++E+ SS L L L L N+L +P
Sbjct: 109 QLTSVPAGVFDRLVNLEVLGLCCNKLTELPSSAFAKLTRLKHLGLDGNQLKSIPDGAFAR 168
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISH 148
LSSL H ++L NP DIL S + H
Sbjct: 169 LSSLTH---VWLHTNPWDCQCTDILYLSGWVAQH 199
>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 633
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L LP I +++L LNL NQL LPV +NL L L N
Sbjct: 164 LQNLEKLNLRKNRLTV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LNLK N+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 222 QLTTFPKEIG-QLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 280
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T +I Q
Sbjct: 281 KLQDLGLGRNQLTTFPKEIGQ 301
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+L P +NL L L N
Sbjct: 95 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL+ N+++ + +G L NL L+L DN+L +P E+ L
Sbjct: 153 QLATLPVEIG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 211
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T +I Q
Sbjct: 212 NLQTLGLSENQLTTFPKEIGQ 232
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I +++L L+L NQLT LP KNL +L LG N
Sbjct: 348 LKKLQDLSLGRNQLTT--LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN 405
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L NN+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 406 QLATFPKEIG-QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 464
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L L N + + +I Q K
Sbjct: 465 KLQDLGLSYNRLVILPKEIGQLEK 488
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS+N+LV LP I + L +L LSYN+L +LP KNL L L +N
Sbjct: 463 LKKLQDLGLSYNRLVI--LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 520
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L N+++ + + +G L NL LDL N+LT +P E+ L
Sbjct: 521 QFKTVSKEIGQLKNLLQLN-LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLK 579
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L LG N + T+ +I
Sbjct: 580 NLYNLGLGTNQLTTLPKEI 598
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + P I ++ L +L L NQLT P KNL L L +N
Sbjct: 256 LKNLENLELSENQLTT--FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 313
Query: 60 KINNMENDYFL----------------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ + + L KL L+L N+++ + +G L N
Sbjct: 314 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKN 373
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDL N+LT +P E+ L +L +L LG N + T +I Q
Sbjct: 374 LYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQ 416
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +++L L LS NQLT P K L L LG N
Sbjct: 233 LENLQELNLKWNRLTA--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +L+L N+ VS +G L NL L+LS N+L +P E+ L
Sbjct: 291 QLTTFPKEIG-QLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLK 349
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 350 KLQDLSLGRNQLTTLPKEIGQ 370
>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
Length = 628
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
LS+LKTL L+ N L S DSL ++++L L+L +N+L+ +P V LT L L F
Sbjct: 192 LSNLKTLALNENSLTSLPDSLQ---NLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRF 248
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L+ L++L+L+ NKI E+ + +G L NL LDLS N L +P + +
Sbjct: 249 NRIK-VVGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNC 307
Query: 119 FHLKSLFLGGN 129
+L +L L N
Sbjct: 308 VNLTALDLQHN 318
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+++ ++++ HN++ +F + LT+LN+ N LT LP+ + L G N
Sbjct: 401 FTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNS 460
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + +D L L +L L NN + + + +G+L L +LDL +N L +P E+ L
Sbjct: 461 LAKLPDDIH-CLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHD 519
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHI 149
L+ L L N LQ R I H+
Sbjct: 520 LQKLILQSN--------ALQSLPRTIGHL 540
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKI 61
H+ ++ N + L + +LT + LS N P + N+T + + N+I
Sbjct: 355 HMDEFNVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQI 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ F L+ LN+K N ++ + ++G + L+ N L +P ++ L +L
Sbjct: 415 DKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNL 474
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L L N +K + N I K + ++ +RL+
Sbjct: 475 EILILSNNMLKRIPNTIGNLKKLRVLDLEENRLE 508
>gi|418726308|ref|ZP_13284919.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960218|gb|EKO23972.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L L+L YNQ +P KNL L L +N
Sbjct: 96 LKNLQMLDLCYNQF--KTVPKEIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYN 153
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L +LNL +N+++ + +G L NL +L+LS N+L +P E+ L
Sbjct: 154 QFKTVPKK-IEQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLE 212
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L+ L LG N +KT+ I Q + +++T L+Y+
Sbjct: 213 NLQVLNLGSNRLKTLPKGIEQ-----LKNLQTLYLNYN 245
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L LNLS NQLT LP +NL L L N
Sbjct: 142 LKNLQMLDLCYNQF--KTVPKKIEQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 199
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ + + L NL L L+ N+LT +P E+ L
Sbjct: 200 QLITLPKEIG-KLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ 258
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N I T+ ++I+Q
Sbjct: 259 SLTELHLQHNQIATLPDEIIQ 279
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L L+L YNQ +P KNL L L N
Sbjct: 119 LKNLQMLDLCYNQF--KTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSN 176
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ + +G L NL +L+L N L +P + L
Sbjct: 177 QLTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLK 235
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L+L N + T+ +I
Sbjct: 236 NLQTLYLNYNQLTTLPREI 254
>gi|47226972|emb|CAG05864.1| unnamed protein product [Tetraodon nigroviridis]
Length = 384
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+TL +N+L SLP L LNLS N+ +P+ CT +L L LG N+
Sbjct: 84 LARLRTLIAKNNRLDESSLPKEFGSLRLEVLNLSGNRFEEIPLQCTKLLHLQSLSLGGNR 143
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT+L LL L N IS + + +L NL+ L L DN + +P +L+ +
Sbjct: 144 LRSIPAE-VEHLTRLELLYLGGNLISAIPPELANLPNLSYLVLCDNRIQSIPPQLTRMHS 202
Query: 121 LKSLFLGGNPIKTVRNDIL 139
L+SL L N + + +IL
Sbjct: 203 LRSLSLHNNLLTYLPREIL 221
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
+ L L+HN++ S LP + + S L L+LS N LT L C L L K N +
Sbjct: 42 RQLYLNHNRVAS--LPSSVSLFSNLEFLDLSSNGLTAL--CDGVARLARLRTLIAKNNRL 97
Query: 65 ENDY----FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ F +L +L +LNL N+ E+ L++L L L N L +P E+ L
Sbjct: 98 DESSLPKEFGSL-RLEVLNLSGNRFEEIPLQCTKLLHLQSLSLGGNRLRSIPAEVEHLTR 156
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+LGGN I + ++
Sbjct: 157 LELLYLGGNLISAIPPEL 174
>gi|281204955|gb|EFA79149.1| villin [Polysphondylium pallidum PN500]
Length = 1501
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
+LK L++S N+L S + + ++ L LNLS NQL +P +L + + FNK+
Sbjct: 90 NLKKLNISFNQLQSIGANIAL-LKQLKVLNLSNNQLVAIPKEIGQSLSLQIINISFNKLE 148
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+ L L NNKI + S++G L L +LDL++NEL +P E+ L L
Sbjct: 149 ALPKEIGL-LNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAENELKSLPHEIGQLKQLA 207
Query: 123 SLFLGGN 129
L+L N
Sbjct: 208 KLYLDNN 214
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ LKTL L+HN + L + +L +L+LSYN L +L NL L + FN
Sbjct: 42 QLTKLKTLSLAHNNI--QKLDGVSQVLTLEDLDLSYNSLQLLSDELYHVVNLKKLNISFN 99
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L +L +LNL NN++ + +G ++L I+++S N+L +P E+ L
Sbjct: 100 QLQSIGANIAL-LKQLKVLNLSNNQLVAIPKEIGQSLSLQIINISFNKLEALPKEIGLLN 158
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L N I T+ +DI
Sbjct: 159 QLTKLVLNNNKIGTLPSDI 177
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 29/178 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMR-SLTELNLSYNQLTMLPVCTDCKN-LTHLLLGF 58
+L LK L+LS+N+LV+ +P I SL +N+S+N+L LP N LT L+L
Sbjct: 110 LLKQLKVLNLSNNQLVA--IPKEIGQSLSLQIINISFNKLEALPKEIGLLNQLTKLVLNN 167
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVS-----------------------SNVGDL 95
NKI + +D L +L+LL+L N++ + S VG L
Sbjct: 168 NKIGTLPSD-IGKLGQLTLLDLAENELKSLPHEIGQLKQLAKLYLDNNDFLVLPSEVGQL 226
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
L L+L N+L D+P + L L + L N ++ + D ++++ +KT R
Sbjct: 227 SELKELNLRSNQLVDLPSSMHKLTKLTLVDLEDNQWESSQYQAT-DIPQLLAFLKTKR 283
>gi|340375614|ref|XP_003386329.1| PREDICTED: leucine-rich repeat-containing protein 58-like
[Amphimedon queenslandica]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDLS N L S SLP +L +++ S N+ T LP VC+ +L LLL NKI ++
Sbjct: 47 LDLSRNSLSSTSLPQLSLSLNLRKIDFSRNEFTELPLEVCS-IASLRVLLLKCNKIKSLP 105
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ +L +L LNL N+ + S + L L L L N L +VP ++ L L L+
Sbjct: 106 QE-MGSLLQLEELNLSGNEFKQFPSPLLSLSRLTFLHLGANRLQEVPAGINKLTELSYLY 164
Query: 126 LGGNPIKTVRNDILQ 140
LGGN ++ V ++ Q
Sbjct: 165 LGGNRLQHVPPELGQ 179
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
++ L+ L L NK+ SLP + + L ELNLS N+ P LT L LG N
Sbjct: 88 IASLRVLLLKCNKI--KSLPQEMGSLLQLEELNLSGNEFKQFPSPLLSLSRLTFLHLGAN 145
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + LT+LS L L N++ V +G L L L LS N+L +P + L
Sbjct: 146 RLQEVPAG-INKLTELSYLYLGGNRLQHVPPELGQLHKLEALVLSGNQLQYLPSQFKGLM 204
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LKSL L N ++T+ I++
Sbjct: 205 SLKSLHLHDNQLQTLPQSIVR 225
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKIN 62
L+ L+LS N+ PL + + LT L+L N+L +P + L++L LG N++
Sbjct: 113 QLEELNLSGNEFKQFPSPL-LSLSRLTFLHLGANRLQEVPAGINKLTELSYLYLGGNRLQ 171
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ + L KL L L N++ + S L++L L L DN+L +P + L +L+
Sbjct: 172 HVPPE-LGQLHKLEALVLSGNQLQYLPSQFKGLMSLKSLHLHDNQLQTLPQSIVRLKNLQ 230
Query: 123 SLFLGGNP--IKTVRN------DILQDSKRIISH 148
L L NP ++ +R +L+ S R + H
Sbjct: 231 ELSLRNNPLVLRFIREYSGAIPSLLELSGRAVKH 264
>gi|418755269|ref|ZP_13311476.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
gi|409964280|gb|EKO32170.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
Length = 199
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N+L + LP+ I ++++L LNL NQLT LP +NL L LG N
Sbjct: 28 LQNLQKLVLNRNQLTT--LPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNN 85
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL L L N+++ + +G+L NL L+LS N+LT +P E+ +L
Sbjct: 86 KLTALPIE-IENLQKLQWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQ 144
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L++L L N + T+ +I
Sbjct: 145 KLETLDLYNNQLTTLPKEI 163
>gi|344923733|ref|ZP_08777194.1| putative lipoprotein [Candidatus Odyssella thessalonicensis L13]
Length = 409
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+HL TL ++ NKL S S P +L L L NQLT LP KNL L L N+
Sbjct: 190 LTHLVTLGVATNKLTSLS-PTIKYCYNLRNLLLMENQLTSLPAEIGKLKNLQELELNNNQ 248
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L KL L L +NK+ + + +G+L+NL L L N+LT +P + +L +
Sbjct: 249 LKYLPREIGW-LAKLQTLELNHNKLLALPAEIGNLVNLKELFLGGNKLTALPAGICNLIN 307
Query: 121 LKSLFLGGNPIKTVRNDI 138
L++L L GNP+ + + I
Sbjct: 308 LQTLNLQGNPLIELPSQI 325
>gi|312372215|gb|EFR20228.1| hypothetical protein AND_20473 [Anopheles darlingi]
Length = 1701
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
L+ D S N +V S F + RSL L+LS NQL LP + L L L FN++
Sbjct: 730 LEQFDASRNSIVEISAKAFRNSRSLQTLDLSSNQLHELPESLSGLAELRSLDLSFNQLTE 789
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL---DLSDNELTDVP-CELSSLF 119
+ + ++ L L NNK++++ G L NL +L DLS NELT + L +L
Sbjct: 790 LSPNLLVSWRNLEELKASNNKVNQLHQ--GSLRNLPLLQYFDLSSNELTQLEHGSLRNLP 847
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
L+ L L N I ++ + +D + + H++ + L Y
Sbjct: 848 ELQELVLADNRITELKERVFEDLPNLQAVHLQQNNLRY 885
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L++LDLS N+L S L + R+L EL S N++ L + + L + L N
Sbjct: 774 LAELRSLDLSFNQLTELSPNLLVSWRNLEELKASNNKVNQLHQGSLRNLPLLQYFDLSSN 833
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNEL 108
++ +E+ L +L L L +N+I+E+ V DL NL + L N L
Sbjct: 834 ELTQLEHGSLRNLPELQELVLADNRITELKERVFEDLPNLQAVHLQQNNL 883
Score = 46.2 bits (108), Expect = 0.013, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKIN 62
L+ LD+S N L + F + L +N+S+N+LT + T D ++ L G N++
Sbjct: 537 LRRLDISGNALSAIEPSAFGNTPMLETVNISFNELTHIHPGTFRDLHHMFELDAGDNRLQ 596
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEV-----SSNVGDLINLAILDLSDNELTDVP-CELS 116
L + ++ NL+ NKIS + S + DL NL +LD+S NELT +P
Sbjct: 597 EFIPGLPLAVERI---NLQRNKISALPQPSTGSKLWDLPNLRMLDVSGNELTRLPRAVFK 653
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L+ L L N ++++ + L R+
Sbjct: 654 PAPQLRVLSLARNQLQSIDDGSLSGLTRL 682
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 18 DSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKL 75
D+LP+ L L+LSYN+L +P L L L N+I +E D F+ + L
Sbjct: 436 DALPM------LRFLDLSYNKLEAIPFGALRGHGTLEQLYLNQNRIRMIERDAFMAMPGL 489
Query: 76 SLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKT 133
L L+NN +S ++ +L L +D+S N + P L + L+ L + GN +
Sbjct: 490 RELRLQNNSLSDQLPMPFWNLPGLKGIDISYNNFRRMDPSLLVGVPSLRRLDISGNALSA 549
Query: 134 VRNDILQDSKRI---------ISHIK--TSRLDYHCQNVDGGGMSSQESTS--EINIDKY 180
+ ++ + ++HI T R +H +D G QE + +++
Sbjct: 550 IEPSAFGNTPMLETVNISFNELTHIHPGTFRDLHHMFELDAGDNRLQEFIPGLPLAVERI 609
Query: 181 KLDRTKTLTL 190
L R K L
Sbjct: 610 NLQRNKISAL 619
Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 52/179 (29%)
Query: 25 DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
D+ +L L++S N+LT LP V L L L N++ ++++ LT+L +LNL++
Sbjct: 630 DLPNLRMLDVSGNELTRLPRAVFKPAPQLRVLSLARNQLQSIDDGSLSGLTRLEVLNLQD 689
Query: 83 NKI---------------------SEVSSNVGDLIN------------------------ 97
N++ + + V +L++
Sbjct: 690 NRVLALHERCFNPLENLRELNLQGNRIEVLVDNLLDGNALLEQFDASRNSIVEISAKAFR 749
Query: 98 ----LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
L LDLS N+L ++P LS L L+SL L N + + ++L S R + +K S
Sbjct: 750 NSRSLQTLDLSSNQLHELPESLSGLAELRSLDLSFNQLTELSPNLLV-SWRNLEELKAS 807
>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
Length = 440
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN-LTHLLLGFN 59
L HL+ L+LS+N+L LP I + L +LNL N LT LP N L +L + N
Sbjct: 293 LKHLQKLELSYNEL--KELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQN 350
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ N+ LT L L NN+++ + +G L +L+ L L +N+L +P E+ L
Sbjct: 351 KLTNIPPTVG-QLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPLEIKQLS 409
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISH 148
LKSL L GNP+ ++ +++++ H
Sbjct: 410 KLKSLQLTGNPMAQSE---IEKARKLLPH 435
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L LK LDL N+L P+ + L EL L YN LT LP NLT L ++
Sbjct: 109 LKQLKKLDLQGNELAQLP-PIVEQLTGLEELILGYNYLTQLP--GSVGNLTQL--KVLEV 163
Query: 62 NNMENDYFL------TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+N ND F LT L LNL N++SE+S +L+NL L+L N+L+ +P +
Sbjct: 164 HN--NDLFRLPSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAI 221
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQ 140
L L+ L L GN + + +I Q
Sbjct: 222 GQLTALQKLVLSGNNMNVLPANIEQ 246
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L HN+L LP+ I + +L +L LS N + +LP +L HL LG N
Sbjct: 201 LVNLQQLNLQHNQL--SQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGN 258
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L+ L L N + ++ + L +L L+LS NEL ++P E+ L
Sbjct: 259 TLEQLP-PTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLT 317
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L LG N + + +I Q
Sbjct: 318 QLKQLNLGQNLLTKLPPEIGQ 338
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D L L L+L NN I +S + L L LDL NEL +P + L L+ L L
Sbjct: 81 DEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELIL 140
Query: 127 GGN 129
G N
Sbjct: 141 GYN 143
>gi|74152736|dbj|BAE42636.1| unnamed protein product [Mus musculus]
Length = 976
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
HL LD+SHN+L + +R + +LNLS+NQL LP +L L + FN++
Sbjct: 36 HLTELDVSHNRLTILGAEVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 95
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ D F L L L++ +N+++ + L L LD+S N L +P ++S+L LK
Sbjct: 96 HLP-DSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALK 154
Query: 123 SLFLGGNPIKTV 134
L+L G + T+
Sbjct: 155 ILWLSGAELGTL 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFID-MRSLTELNLSYNQL 39
L+HL+TLD+ HN+L + LP I +R+L L LS +L
Sbjct: 104 LNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 163
Query: 40 TMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
LP C + +L L+L N + + D F L +L +LNL +N E + + L
Sbjct: 164 GTLPRGFC-ELASLESLMLDNNGLQALP-DEFSRLQRLKMLNLSSNLFEEFPAALLPLAG 221
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L LS N+LT VP ++ L L +L+L N I+ + + I++
Sbjct: 222 LEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVE 264
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L LK L+LS N L + + + L EL LS NQLT +P + L L L N+
Sbjct: 196 LQRLKMLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNR 254
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
I + D + LT L L L+ N+I+ + N G L + + + DN L P E+
Sbjct: 255 IRYLP-DSIVELTGLEELVLQGNQIAVLPDNFGQLSPVGLWKIKDNPLIQPPYEV 308
Score = 44.3 bits (103), Expect = 0.049, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 28 SLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
SL L L N+ LP V +LT L + N++ + + L ++ LNL +N++
Sbjct: 12 SLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALREMRKLNLSHNQL 71
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ + +G L +L LD+S N L +P S L HL++L
Sbjct: 72 PALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTL 110
>gi|78100564|gb|ABB21104.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 324
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L+ N L S F + SLT L+LSYNQL LP V KNL L L N++ ++
Sbjct: 64 LHLNLNSLSKLSPKAFHSLSSLTFLDLSYNQLQALPAGVFDQLKNLETLYLLQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F LTK++ L+L+ NK+ +S V D L L IL L+ N+L VP + L L
Sbjct: 124 QGIFDKLTKITYLDLEGNKLQSLSHGVFDHLTKLTILWLNTNQLKSVPEGAFNFLEKLTR 183
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L L NP NDIL +K + + GG + E T E
Sbjct: 184 LQLQSNPWDCTCNDILYMAKWLKKKQDGGLGGVDTAGCEEGGKAVLEITEE 234
>gi|195124049|ref|XP_002006506.1| GI21088 [Drosophila mojavensis]
gi|193911574|gb|EDW10441.1| GI21088 [Drosophila mojavensis]
Length = 1445
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL------TMLPVCTDCKNLTHLL 55
L L L+L+HN L F ++ L LNL N + LP+ NL L
Sbjct: 380 LIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPL----YNLHTLN 435
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE 114
L N+++ +++ F L LS L L NN IS V V + +L LDLS N+L +VP
Sbjct: 436 LAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRA 495
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L L L++L LG N I+T N Q K + +D H N+ G + S
Sbjct: 496 LQDLAMLRTLDLGENQIRTFDN---QSFKNLHQLTGLRLIDNHIGNITVGMFADLPRLSV 552
Query: 175 INIDKYKL 182
+N+ K ++
Sbjct: 553 LNLAKNRI 560
Score = 43.5 bits (101), Expect = 0.087, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL------ 55
L+ L+ ++LS+N L + LF + L E++L N+L LP K L H L
Sbjct: 306 LASLRIVNLSNNHLETLPEGLFAGSKELREIHLQNNELYELP-----KGLFHRLEQLLVV 360
Query: 56 -LGFNKI--NNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDV 111
L N++ N+++N F L +L +LNL +N ++ + +L L IL+L +N + +
Sbjct: 361 DLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHI 420
Query: 112 P-CELSSLFHLKSLFLGGNPIKTVRNDIL 139
L++L +L L N + T+ + +
Sbjct: 421 EDNAFLPLYNLHTLNLAENRLHTLDDKLF 449
Score = 43.5 bits (101), Expect = 0.093, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L+L HN + S + SL +NLS N L LP + K L + L N
Sbjct: 282 LRRLQHLNLQHNNISELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQNN 341
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV---SSNVGDLINLAILDLSDNELTDVPCE-L 115
++ + F L +L +++L N+++ ++ LI L +L+L+ N LT +
Sbjct: 342 ELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTF 401
Query: 116 SSLFHLKSLFLGGNPIKTVRND 137
L+ L+ L L N I + ++
Sbjct: 402 KELYFLQILNLRNNSIGHIEDN 423
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
S LK LDLS N+L + +P + D+ L L+L NQ+ + + LT L L N
Sbjct: 477 SDLKELDLSSNQL--NEVPRALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDN 534
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL-INLAILDLSDNELTDVPCELSSL 118
I N+ F L +LS+LNL N+I + D L + L N L+D+ ++L
Sbjct: 535 HIGNITVGMFADLPRLSVLNLAKNRIQSIERGAFDKNYELEAIRLDRNFLSDINGVFATL 594
Query: 119 FHLKSLFLGGN 129
L L L N
Sbjct: 595 VSLLWLNLSEN 605
>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
Length = 1034
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ SLT+L L+ NQL+ LP + +LTHL L N++N + + F LT L L L NN
Sbjct: 37 NLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALP-EAFGNLTSLRYLKLNNN 95
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+I+ + ++G+L +L LDLS N+L +P +L L L L NP+ + + +
Sbjct: 96 QINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSV 150
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ L L++N++ ++LP I ++ SLT L+LS NQL LP + +LT L L N
Sbjct: 84 LTSLRYLKLNNNQI--NALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + D LT L L L NN++ + + G+L +L LDLS+N+L +P +L
Sbjct: 142 PLTGLP-DSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLS 200
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L+L GN I + I
Sbjct: 201 SLTYLYLSGNQINALPESI 219
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L +LDLS N+L ++LP F ++ SLT L+L+ N LT LP + +L HL L N
Sbjct: 107 LTSLTSLDLSANQL--NALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D LT L+ L+L N+++ + G+L +L L LS N++ +P + +L
Sbjct: 165 QLKALP-DSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLT 223
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
+L+ L+L N + T+ I+
Sbjct: 224 NLRYLYLWNNQLNTLPESIV 243
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ LK L L++N+L +LP ++ SLT L+LS NQL LP + +LT+L L N
Sbjct: 153 LTSLKHLYLNNNQL--KALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGN 210
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+IN + + LT L L L NN+++ + ++ +L NL L LS+N+L +P +L
Sbjct: 211 QINALP-ESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLS 269
Query: 120 HLKSLFLGGN 129
L L+L GN
Sbjct: 270 SLTDLYLSGN 279
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ L LDLS N+L ++LP F ++ SLT L LS NQ+ LP + NL +L L N
Sbjct: 176 LTSLTFLDLSENQL--NALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNN 233
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++N + + + LT L+ L L N+++ + G+L +L L LS N+L +P +L
Sbjct: 234 QLNTLP-ESIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLS 292
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L L+L N + + I Q +K
Sbjct: 293 SLTYLYLNSNQLTGLPESIGQLNK 316
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L L LS N+L ++LP F ++ SLT+L LS NQL LP + +LT+L L N
Sbjct: 245 LTNLTDLYLSENQL--NALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSN 302
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
++ + + L KL L L +NK+ + + L L LD+ +N+L ++P E+
Sbjct: 303 QLTGLP-ESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELPPEV 357
>gi|357618946|gb|EHJ71730.1| putative mitotic protein phosphatase 1 regulator [Danaus plexippus]
Length = 601
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 114/220 (51%), Gaps = 13/220 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L LK ++S+N L LP ++R + L+ ++N + LP C L + + N I
Sbjct: 224 LRDLKKFNVSNNDL--KKLPALGELRKMETLDANHNAIEELPDFYGCVALKEIYIANNFI 281
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ ++ + L++LN+++NK+ + N+ L NL DLS+N L +P L L L
Sbjct: 282 KEITEEFCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNNLNKLPKNLGLLSQL 341
Query: 122 KSLFLGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
+S+ + GN + VR D+++ + R++ +++ D + V G ++ + DKY
Sbjct: 342 QSISMEGNKLSFVRQDVIRGGTDRMMKYLR----DRMAEEVVGEARLNENNWP----DKY 393
Query: 181 KLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDK 218
L +++ L + ++ ++PE V++ ++ I+++ +K
Sbjct: 394 TLKKSQALIVPAKELASVPEDVFVAAAQAEVHVIDLSRNK 433
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 26/150 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKI 61
HL+ +DL N L LP+ + D+++L EL +S N+ T +P C D +NL LL N+I
Sbjct: 470 HLQYIDLGKNCLTD--LPMEMSDLKNLRELVISNNRFTKIPRCVYDLENLEILLAAENQI 527
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+I+ S + L LA+LDL++N + VP EL + HL
Sbjct: 528 T---------------------EINVSSDALAKLKKLAVLDLTNNSIITVPPELGNFTHL 566
Query: 122 KSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+SL L GN + R+ +L + + I+S+++
Sbjct: 567 RSLELMGNCFRQPRHAVLTKGTASILSYLR 596
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+LS L TL L H+ + P ++ +L+ L+L +N+L LP + L + +N
Sbjct: 108 LLSELITLKL-HDNAIESIPPEIGELNNLSNLSLDHNRLECLPKEFYKLTEMRWLSISYN 166
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I N+E D F L L+ L+L +NK++ + +G L+ L L+LS NELT++P ++ +L
Sbjct: 167 SIKNIEPD-FGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNELTELPPDIVNLR 225
Query: 120 HLKSLFLGGNPIK 132
LK + N +K
Sbjct: 226 DLKKFNVSNNDLK 238
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 5 LKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNKI 61
LK LDLS N K++S ++ L + L L L N + ++ P + NL++L L N++
Sbjct: 89 LKMLDLSSNVIKIISPNIKL---LSELITLKLHDNAIESIPPEIGELNNLSNLSLDHNRL 145
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +++ LT++ L++ N I + + GDL+ L LDLS N+LT +P + L L
Sbjct: 146 ECLPKEFY-KLTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRL 204
Query: 122 KSLFLGGNPIKTVRNDI--LQDSKR 144
L L N + + DI L+D K+
Sbjct: 205 VDLNLSYNELTELPPDIVNLRDLKK 229
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L++L L L HN+L + LP F + + L++SYN + + P D LT L L N
Sbjct: 132 LNNLSNLSLDHNRL--ECLPKEFYKLTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHN 189
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ L +L LNL N+++E+ ++ +L +L ++S+N+L +P L L
Sbjct: 190 KLTSLPPGMGY-LVRLVDLNLSYNELTELPPDIVNLRDLKKFNVSNNDLKKLPA-LGELR 247
Query: 120 HLKSLFLGGNPIK 132
+++L N I+
Sbjct: 248 KMETLDANHNAIE 260
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
L NK+ + + L L+ L L +N I V + +L +DL N LTD+P E+
Sbjct: 429 LSRNKLTGLPAGFHLVRDTLTQLLLSSNSIEVVPPEISACKHLQYIDLGKNCLTDLPMEM 488
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEI 175
S L +L+ L + N K R Y +N++ ++++ +EI
Sbjct: 489 SDLKNLRELVISNN-----------------RFTKIPRCVYDLENLE-ILLAAENQITEI 530
Query: 176 NIDKYKLDRTKTLTLCKVIN 195
N+ L + K L + + N
Sbjct: 531 NVSSDALAKLKKLAVLDLTN 550
>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 424
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 69 LKNLQMLDLSDNQLII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 126
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 127 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 185
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N IKT+ +I
Sbjct: 186 KLQWLYLSYNQIKTLPQEI 204
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L LSYNQ+ LP + + L L L N
Sbjct: 161 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 219 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 277
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 278 NLQDLYLVSNQLTTIPKEIGQ 298
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + +P I +++L +L L NQLT +P +NL L LG N
Sbjct: 253 LQNLKVLFLNNNQLTT--IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 310
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 311 QLTILPKEIG-KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 369
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 370 NLQELYLSNNQLITIPKEIGQ 390
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT +P +NL L L N
Sbjct: 230 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 288 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 346
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 347 NLQELYLSNNQLTTIPKEIGQ 367
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 26/135 (19%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L L+LS NQL +LP +I
Sbjct: 49 VRVLDLSEQKL--KALPKKIGQLKNLQMLDLSDNQLIILP---------------KEIRQ 91
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L +L+L++N+++ + +G L NL L LS+N+LT P E+ L L+
Sbjct: 92 LKN--------LQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 143
Query: 124 LFLGGNPIKTVRNDI 138
L L N IKT+ +I
Sbjct: 144 LNLSANQIKTIPKEI 158
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 276 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN 333
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 334 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 392
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 393 NLQTLYLRNN 402
>gi|403269444|ref|XP_003926749.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 3-like [Saimiri
boliviensis boliviensis]
Length = 1258
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C+ L+ L L FN
Sbjct: 400 LSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFN 459
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 460 HLSRLDDSSFLGLSLLNTLHIGNNKVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGA 519
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 520 FSGLDKLRRLILQGNRIRSI 539
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 9 DLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK-NLTHLLLGFNKINNMEND 67
DLSHN+L ++SL E+ L+ N+L +P N+T L L N+I + +
Sbjct: 218 DLSHNRLSFIKASSMSHLQSLREVKLNSNELATIPSLGPVSANITLLTLAGNRIVEILPE 277
Query: 68 YFLTLTKLSLLNLKNNKISEV--------------------SSNVGDLINLA----ILDL 103
+ L L+L +N ISE+ S G NLA +L L
Sbjct: 278 HLKEFQSLETLDLSSNNISELKTAFPPLQLKYLYLNSNRVTSVEPGYFDNLANTLLVLKL 337
Query: 104 SDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ N ++ +P ++ L L+ L L N IK V
Sbjct: 338 NRNRISAIPPKMFKLPQLQHLELNRNKIKNV 368
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
LK L L+ N++ S F ++ +L L L+ N+++ +P L HL L NKI
Sbjct: 306 QLKYLYLNSNRVTSVEPGYFDNLANTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKI 365
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSLF 119
N++ F L L L ++ N ++++ L N+ IL L N LT++ L L
Sbjct: 366 KNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLL 425
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I + D + +++ ++ SRLD
Sbjct: 426 MLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 465
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+++ L L+ N++V + LP + + +SL L+LS N ++ L L +L L N++
Sbjct: 259 ANITLLTLAGNRIV-EILPEHLKEFQSLETLDLSSNNISELKTAFPPLQLKYLYLNSNRV 317
Query: 62 NNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP-CELSSLF 119
++E YF L L +L L N+IS + + L L L+L+ N++ +V L
Sbjct: 318 TSVEPGYFDNLANTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLG 377
Query: 120 HLKSLFLGGNPI 131
LKSL + N +
Sbjct: 378 ALKSLKMQRNGV 389
>gi|357627181|gb|EHJ76953.1| hypothetical protein KGM_10616 [Danaus plexippus]
Length = 238
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 13/163 (7%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L+ LD+S NK+ +SD++ +++ L +LNLS N + +LP + K L L + FN
Sbjct: 39 QLRNLDVSKNKITNISDAIS---ELKHLKQLNLSSNMIQILPSSVENLKKLELLNMSFNS 95
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ +L+ L + L NNKI + + L NL +++LS N++T+VP +S+LF
Sbjct: 96 LTSLP-PAISSLSNLKQIYLNNNKIKKFPMEILGLPNLEVVELSHNKMTEVPSGMSNLFA 154
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG 163
+ L L N I + D+ Q + +K RL+ +C ++D
Sbjct: 155 AE-LNLSQNEISVLSEDLSQAPR-----LKILRLEENCLSLDA 191
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 48 CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNE 107
+ L +L + NKI N+ +D L L LNL +N I + S+V +L L +L++S N
Sbjct: 37 AEQLRNLDVSKNKITNI-SDAISELKHLKQLNLSSNMIQILPSSVENLKKLELLNMSFNS 95
Query: 108 LTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
LT +P +SSL +LK ++L N IK +IL
Sbjct: 96 LTSLPPAISSLSNLKQIYLNNNKIKKFPMEIL 127
>gi|260832372|ref|XP_002611131.1| hypothetical protein BRAFLDRAFT_88470 [Branchiostoma floridae]
gi|229296502|gb|EEN67141.1| hypothetical protein BRAFLDRAFT_88470 [Branchiostoma floridae]
Length = 1298
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ L L+ NK+ F+++ L +L+LSYNQ+TM+ + L L L NKI
Sbjct: 579 LQVLSLTSNKITLIQKGTFVNLTRLRKLSLSYNQITMIQPGAFANVPGLRQLFLAHNKIT 638
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSSLFH 120
N+++D F L+ L L L NNKI+ + + +L L L L N++T + P S+L
Sbjct: 639 NIKDDAFANLSGLRELWLANNKITTIKPGIFANLPQLQNLYLHYNQITTINPGIFSNLPQ 698
Query: 121 LKSLFLGGNPIKTV 134
L+ L+L N + +
Sbjct: 699 LQKLYLTNNKMSAI 712
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ L+ L LS+N++ F+++ L +L LSYN++TML + L +L L N
Sbjct: 382 VPQLQNLSLSYNQITMILEGTFVNLTQLQKLKLSYNKITMLQNGAFVNLPQLQYLNLFSN 441
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS---NVGDLINLAILDLSDNELTDVPCE-L 115
+I ++ D F L +L L+L NKI+ N +L L +L LS N++T + +
Sbjct: 442 QITKIQPDAFANLPRLRQLDLSLNKITMSKPGILNFANLPGLRVLALSHNKITKMKEDAF 501
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQD 141
++L L+ L+LG N I T+ I +
Sbjct: 502 ANLSGLRVLWLGSNKITTINPGIFAN 527
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
S + L L+HN + +F+++ L L+LSYNQ+TM+ T + L L L +NK
Sbjct: 61 SSITDLYLNHNNIAIIREGVFVNVPQLQNLSLSYNQITMILEGTFVNLTQLQKLKLSYNK 120
Query: 61 INNMENDYFLTLTKLSLLNLKNN--KISEVSSNV-GDLINLAILDLSDNELT-DVPCELS 116
I ++N F+ L +L LNL +N +I+++ + +L L LDLS N++T P +
Sbjct: 121 ITMLQNGAFVNLPQLQYLNLFSNQLQITKIQPDAFANLPRLRTLDLSLNKITMSKPGIFA 180
Query: 117 SLFHLKSLFLGGNPIKTVR 135
+L L+ L L N I ++
Sbjct: 181 NLPGLRVLALSKNKITKMK 199
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L+TLDLS NK+ +F ++ L L LS N++T + + + L L L N
Sbjct: 158 LPRLRTLDLSLNKITMSKPGIFANLPGLRVLALSKNKITKMKEGSFANLSGLRELWLNTN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILD---LSDNELTDVPCELS 116
KI + F L L L L N+I+ + G +NLA L LS+N++T +P
Sbjct: 218 KITTINPGIFANLPWLEKLYLSGNQITLIQE--GTFVNLAQLQELSLSNNQITLIPPGAF 275
Query: 117 SLFH-LKSLFLGGNPIKTVRND 137
+ F L+ L+L N I ++ D
Sbjct: 276 ANFTLLQVLWLTSNKITLIQKD 297
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ L+ L LS+N++ F+++ L +L LSYN++TML + L +L L N
Sbjct: 84 VPQLQNLSLSYNQITMILEGTFVNLTQLQKLKLSYNKITMLQNGAFVNLPQLQYLNLFSN 143
Query: 60 --KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCEL 115
+I ++ D F L +L L+L NKI+ + +L L +L LS N++T +
Sbjct: 144 QLQITKIQPDAFANLPRLRTLDLSLNKITMSKPGIFANLPGLRVLALSKNKITKMKEGSF 203
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQD 141
++L L+ L+L N I T+ I +
Sbjct: 204 ANLSGLRELWLNTNKITTINPGIFAN 229
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLL---LG 57
L+ L+ L LS+NK+ F+++ L LNL NQL + + D NL L L
Sbjct: 108 LTQLQKLKLSYNKITMLQNGAFVNLPQLQYLNLFSNQLQITKIQPDAFANLPRLRTLDLS 167
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDV-PCEL 115
NKI + F L L +L L NKI+++ + +L L L L+ N++T + P
Sbjct: 168 LNKITMSKPGIFANLPGLRVLALSKNKITKMKEGSFANLSGLRELWLNTNKITTINPGIF 227
Query: 116 SSLFHLKSLFLGGNPIKTVR 135
++L L+ L+L GN I ++
Sbjct: 228 ANLPWLEKLYLSGNQITLIQ 247
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L LS+NK+ F+++ L LNL NQ+T + + L L L N
Sbjct: 406 LTQLQKLKLSYNKITMLQNGAFVNLPQLQYLNLFSNQITKIQPDAFANLPRLRQLDLSLN 465
Query: 60 KINNMENDY--FLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCEL 115
KI + F L L +L L +NKI+++ + +L L +L L N++T + P
Sbjct: 466 KITMSKPGILNFANLPGLRVLALSHNKITKMKEDAFANLSGLRVLWLGSNKITTINPGIF 525
Query: 116 SSLFHLKSLFLGGNPIKTVR 135
++L L+ L+L NPI ++
Sbjct: 526 ANLPWLEKLYLSVNPITLIQ 545
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L LS N + F+++ L L L NQ+T++P + L L L N
Sbjct: 528 LPWLEKLYLSVNPITLIQEGTFVNLAQLQVLQLFNNQITLIPPGAFANFTLLQVLSLTSN 587
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
KI ++ F+ LT+L L+L N+I+ + ++ L L L+ N++T++ + ++
Sbjct: 588 KITLIQKGTFVNLTRLRKLSLSYNQITMIQPGAFANVPGLRQLFLAHNKITNIKDDAFAN 647
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L+ L+L N I T++ I +
Sbjct: 648 LSGLRELWLANNKITTIKPGIFAN 671
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ L L+HNK+ + F ++ L EL L+ N++T + + + L +L L +N+I
Sbjct: 627 LRQLFLAHNKITNIKDDAFANLSGLRELWLANNKITTIKPGIFANLPQLQNLYLHYNQIT 686
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVS 89
+ F L +L L L NNK+S ++
Sbjct: 687 TINPGIFSNLPQLQKLYLTNNKMSAIA 713
>gi|425781750|gb|EKV19696.1| Cell morphogenesis protein Sog2, putative [Penicillium digitatum
PHI26]
gi|425782929|gb|EKV20808.1| Cell morphogenesis protein Sog2, putative [Penicillium digitatum
Pd1]
Length = 993
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
T+DL H+ + P+ ++ E L+LS NQL +P +C +L +L + N
Sbjct: 114 TIDLGHSHIARIPEPVVDLIKDEVERLSLSNNQLFHIPYRFAECSHLRYLNIRANNFREF 173
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L +L+L NKI E+ + + L +L +L + N LTD+P LS + L+
Sbjct: 174 PKGVY-KLPLLEILDLSRNKIKELPNEISKLKSLRVLSVMQNRLTDLPVGLSEMHKLQIF 232
Query: 125 FLGGNPIKTVRNDILQDSK 143
GNP++ DIL++++
Sbjct: 233 KCIGNPLRKPLRDILEETE 251
>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
Length = 424
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L LP I+ +++L L L N+LT LP KNL L LG N
Sbjct: 115 LKNLQVLDLGSNQLTV--LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL L +N+++ +S ++ L NL LDLS+N+LT +P E+ L
Sbjct: 173 QLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 231
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL+L N T +I Q
Sbjct: 232 NLKSLYLSENQFATFPKEIGQ 252
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS +L +LP+ I +++L L L YNQLT+LP KNL L L N++
Sbjct: 48 EVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ N+ L L +L+L +N+++ + + L NL +L L N LT +P E+ L +L
Sbjct: 106 TTLPNE-IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNL 164
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+ L LG N + + +I Q + ++ ++RL ++++
Sbjct: 165 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIE 205
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 276 LKKLQYLYLSDNQLIT--LPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 333
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 334 QLKTLPKE-IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLK 392
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 393 NLQTLYLNNNQFSS------QEKKRI 412
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 138 LKNLQLLYLRSNRLTT--LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 196 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 254
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 255 NLKVLFLNNNQITILPNEI 273
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 207 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 264
Query: 60 KINNMEND---------------YFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
+I + N+ +TL K L L+L N+++ + VG L N
Sbjct: 265 QITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLEN 324
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDL +N+L +P E+ L +L++LFL N + T+ +I Q
Sbjct: 325 LQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQ 367
>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 377
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L++N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 346 NLQTLYLNNNQFSS------QEKKRI 365
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 588
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+L N+L LP I +++L LNL NQL LPV +NL L L
Sbjct: 94 QLQNLEKLNLRKNRLTV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 151
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + L L LNLK N+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 152 NQLTTFPKEIG-QLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 210
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T +I Q
Sbjct: 211 KKLQDLGLGRNQLTTFPKEIGQ 232
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L L+ L L N+L + LP I +++L L+L NQLT LP KNL +L LG
Sbjct: 278 QLKKLQDLSLGRNQLTT--LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGR 335
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + L L L+L NN+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 336 NQLTTFPKEIG-QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 394
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L+ L L N + + +I Q + +++T L Y+
Sbjct: 395 KKLQDLGLSYNRLVILPKEIGQ-----LKNLQTLSLSYN 428
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L L+ L LS+N+LV LP I +++L L+LSYN+LT LP KNL +L L
Sbjct: 393 QLKKLQDLGLSYNRLVI--LPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSE 450
Query: 59 NK-------INNMEN--------DYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N+ I ++N + F T K L L+L NN+++ + + L
Sbjct: 451 NRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLK 510
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL LDL+ N+LT +P E+ L +L +L LG N + T+ +I
Sbjct: 511 NLYDLDLNTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 552
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 26/138 (18%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+++ L+LS + LP I+ +++L LNL NQL LPV +I
Sbjct: 51 NVRVLNLSGQNFTT--LPKEIEKLKNLQTLNLQDNQLATLPV---------------EIG 93
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++N L LNL+ N+++ + +G L NL L+L DN+L +P E+ L +L+
Sbjct: 94 QLQN--------LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQ 145
Query: 123 SLFLGGNPIKTVRNDILQ 140
+L L N + T +I Q
Sbjct: 146 TLGLSENQLTTFPKEIGQ 163
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+LS N+L + P I ++ L +L L NQLT P KNL L L +
Sbjct: 186 QLKNLENLELSENQLTT--FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCY 243
Query: 59 NKINNMENDYFL----------------------TLTKLSLLNLKNNKISEVSSNVGDLI 96
N+ + + L KL L+L N+++ + +G L
Sbjct: 244 NQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLK 303
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NL LDL N+LT +P E+ L +L +L LG N + T +I Q
Sbjct: 304 NLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQ 347
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+L N+L + LP I +++L L LS NQLT P K L L LG
Sbjct: 163 QLENLQELNLKWNRLTA--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGR 220
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + L L +L+L N+ VS +G L NL L+LS N+L +P E+ L
Sbjct: 221 NQLTTFPKEIG-QLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQL 279
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 280 KKLQDLSLGRNQLTTLPKEIGQ 301
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+LS N+L + LP I +++L +L+L N+ P +NL +L LG
Sbjct: 439 QLKNLENLELSENRLAT--LPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGN 496
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L+L N+++ + +G L NL L L N+LT +P E+ L
Sbjct: 497 NQLTALPKE-IAQLKNLYDLDLNTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIGQL 555
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI 145
L+ L L NPI + Q+ +RI
Sbjct: 556 KKLQWLLLSVNPI------LPQEKERI 576
>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
Length = 630
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+++ +++L HN++ D +P +F + LT+LN++YN LT LP+ N+ L LG
Sbjct: 403 FTNVHSINLEHNQV--DRIPYGIFSRAKHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGT 460
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++N + +D L L +L L NN + ++ S++G+L L +LDL +N L +P E+ L
Sbjct: 461 NQLNKVPDD-ISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEENRLEGLPPEIGFL 519
Query: 119 FHLKSLFLGGN 129
L+ L + N
Sbjct: 520 KDLQKLVVQSN 530
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L LK LDL HNKL +P + + SL L L +N++ ++ + KNL L L N
Sbjct: 217 LVQLKVLDLRHNKLTE--IPDVVYKLPSLITLFLRFNRIRVVGEEIRNLKNLITLSLREN 274
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N LT+L L++ +N + ++ +G+ I+L L L NEL ++P + +L
Sbjct: 275 RIRQLPNGIG-ELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIGNLR 333
Query: 120 HLKSLFLGGNPIKTV 134
+L L L N +K+V
Sbjct: 334 NLTCLGLRYNRLKSV 348
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 32 LNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
L+LS + ++ LP + N+THL+ L NK+ + + L L L L N ++ +
Sbjct: 154 LDLSNSSISQLP--SSMNNVTHLVEFYLYSNKLVTLPPEIG-RLVNLQTLGLSENSLTSL 210
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ +L+ L +LDL N+LT++P + L L +LFL N I+ V +I
Sbjct: 211 PDTLVNLVQLKVLDLRHNKLTEIPDVVYKLPSLITLFLRFNRIRVVGEEI 260
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 52/201 (25%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKIN 62
L+TL L HN+LV LP I ++R+LT L L YN+L +P + C NL + N+I+
Sbjct: 312 LQTLHLQHNELVE--LPQSIGNLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQIS 369
Query: 63 NME--------------------NDY----------------------------FLTLTK 74
+ N Y F
Sbjct: 370 QLPDGLLSSLSNLSSLTLSRNSFNSYPIGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKH 429
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ LN+ N ++ + ++G +N+ L+L N+L VP ++S L +L+ L L N ++ +
Sbjct: 430 LTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKI 489
Query: 135 RNDILQDSKRIISHIKTSRLD 155
+ I K + ++ +RL+
Sbjct: 490 PSSIGNLRKLRVLDLEENRLE 510
>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
Length = 582
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ S
Sbjct: 203 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + LT L L+ N PV + + L + N+
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 426
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N +K + + I
Sbjct: 427 LEVLILSNNLLKKLPHGI 444
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +LA L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEI 234
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ L L L NKL LP + + +L L LS N LT LP D K L L L N
Sbjct: 122 LTQLTELYLYSNKL--QCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + L+ L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPSVVY-RLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPEEI 257
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + +LP + LT L L NK+ + + L L L L N ++ +
Sbjct: 105 LDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVG-CLVNLVTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK + I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
>gi|443894454|dbj|GAC71802.1| FOG: Leucine rich repeat [Pseudozyma antarctica T-34]
Length = 1323
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKI 61
L TLDL H ++ V D+L I + L L YN +T LP D +L +L + N
Sbjct: 163 LDTLDLCHKRIDRVPDALVDLIK-HDVVRLALGYNHITRLPASFADLHSLRYLNIRANNF 221
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D + L +L+L NKI ++ G L++L +L ++ N LT++P + + HL
Sbjct: 222 AHFP-DCVTQMPNLEILDLSRNKIRQLPQQPGRLLSLRVLSMNANRLTELPLWIGKMKHL 280
Query: 122 KSLFLGGNPIK 132
+ L L NP++
Sbjct: 281 RILKLDNNPLE 291
>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 470
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L LP I+ +++L L L N+LT LP KNL L LG N
Sbjct: 161 LKNLQVLDLGSNQLTV--LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL L +N+++ +S ++ L NL LDLS+N+LT +P E+ L
Sbjct: 219 QLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 277
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL+L N T +I Q
Sbjct: 278 NLKSLYLSENQFATFPKEIGQ 298
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 26/161 (16%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS +L +LP+ I +++L L L YNQLT+LP KNL L L N++
Sbjct: 48 EVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 62 NNMENDY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ N+ L L LL L++N+++ + + + L NL
Sbjct: 106 TTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQ 165
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+LDL N+LT +P E+ L +L+ L+L N + T+ N+I Q
Sbjct: 166 VLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 206
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 322 LKKLQYLYLSDNQLIT--LPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 379
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 380 QLKTLPKE-IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLK 438
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 439 NLQTLYLNNNQFSS------QEKKRI 458
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 184 LKNLQLLYLRSNRLTT--LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 242 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 300
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 301 NLKVLFLNNNQITILPNEI 319
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 253 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 310
Query: 60 KINNMEND---------------YFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
+I + N+ +TL K L L+L N+++ + VG L N
Sbjct: 311 QITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLEN 370
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDL +N+L +P E+ L +L++LFL N + T+ +I Q
Sbjct: 371 LQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQ 413
>gi|428169759|gb|EKX38690.1| hypothetical protein GUITHDRAFT_76958, partial [Guillardia theta
CCMP2712]
Length = 551
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYF 69
LS N+L + F +M SLT L+LS N+LT LP T L L L ++ + +
Sbjct: 333 LSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSGTQLTGLGTLKLASLQLTTVPVE-I 391
Query: 70 LTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L++ +L+ L+L +NK++ + +N L L LDLS N L +P +SSL L +L L G
Sbjct: 392 LSMKRLATLDLSSNKLASIPANFFSSLQTLTFLDLSRNYLVSLPVGISSLKGLTTLHLSG 451
Query: 129 NPIKTVRNDIL 139
N + ++ + +L
Sbjct: 452 NQLASIPDGVL 462
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 27/157 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L TLDLS NKL S F +++LT L+LS N L LPV + K LT L L N++
Sbjct: 396 RLATLDLSSNKLASIPANFFSSLQTLTFLDLSRNYLVSLPVGISSLKGLTTLHLSGNQLA 455
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-------------------------GDLIN 97
++ D L+LT L L+L +NK+ + + L +
Sbjct: 456 SIP-DGVLSLTNLKNLDLSSNKLQSLPAGTFTNLSSLEDLSLSSNQLASLPPGFFATLRS 514
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L LDLS+N+ T +P + SL LK L+L N I +
Sbjct: 515 LTTLDLSNNKFTSLPPGIESLTSLKYLYLQNNLISNI 551
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDY 68
LS N+L + F +M SLT L+LS N+LT LP ++L L N++ + + +
Sbjct: 191 LSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSGILSIRSLIFLYASGNQLTAIPSGF 250
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILD---LSDNELTDVPCE-LSSLFHLKSL 124
F L L L+L +NK++ + + G NL ILD L+ N+L S+L LK+L
Sbjct: 251 FSGLNSLQRLDLSSNKLTSLPA--GLFANLIILDSLSLASNQLASFSAGFFSTLNSLKTL 308
Query: 125 FLGGNPIKTVRNDI 138
L N +K + DI
Sbjct: 309 DLSSNQLKAIPADI 322
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L+ L L+ N+L S F + LT+L+LS N LT +P +LT L L N
Sbjct: 88 LTRLRFLHLASNRLTSIPGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSSN 147
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE-LSSL 118
++ + F L +L ++L +N++ + +++ L L L LS N+LT +P S++
Sbjct: 148 QLASFPTGTFTNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNM 207
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
L SL L N + ++ + IL
Sbjct: 208 MSLTSLDLSSNELTSLPSGIL 228
>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 378
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + P I+ ++SL +L LS NQLT+LPV +NL L L N
Sbjct: 92 LKNLQELFLNYNQLTT--FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ +S +G L NL L LS+N+LT P E+ L
Sbjct: 150 QLKTISKE-IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 208
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T +I
Sbjct: 209 NLQELYLSNNQLTTFPKEI 227
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 230 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+LT +P E+ L
Sbjct: 288 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 346
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 347 NLQTLYLRNN 356
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 184 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 301 NLKMLSLDANQLTALPKEI 319
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L L LS+N+L LP+ I +++L ELNL NQL T+ KNL L L N
Sbjct: 115 LKSLHKLYLSNNQLTI--LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ +G L NL L LS+N+LT P E+ L
Sbjct: 173 QLTALSKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LG N + T+ N+I
Sbjct: 232 KLQWLGLGDNQLTTIPNEI 250
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L L +N+L + S + +++L L LS NQLT P +NL L L N+
Sbjct: 161 LKNLQKLYLDNNQLTALSKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 219
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L +
Sbjct: 220 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 278
Query: 121 LKSLFLGGNPIKTV 134
L+ LFL N KT+
Sbjct: 279 LQVLFLSYNQFKTI 292
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT L +NL L L N+
Sbjct: 138 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQ 196
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 197 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 255
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 256 LQELNLDVNQLTTIPKEIGQ 275
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ LFL N + T +I
Sbjct: 54 LSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 113
Query: 140 Q 140
Q
Sbjct: 114 Q 114
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 28/138 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL LP I +++L L+LS NQL +LP KNL L L +N++
Sbjct: 49 VRVLILSEQKL--KVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL- 105
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L +L L LS+N+LT +P E+ L +L+
Sbjct: 106 -----------------------TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQ 142
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N +KT+ +I Q
Sbjct: 143 ELNLWNNQLKTISKEIEQ 160
>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
gallopavo]
Length = 582
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ S
Sbjct: 203 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + LT L L+ N PV + + L + N+
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 426
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N +K + + I
Sbjct: 427 LEVLILSNNLLKKLPHGI 444
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +LA L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEI 234
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ L L L NKL SLP + + +L L LS N LT LP D K L L L N
Sbjct: 122 LTQLTELYLYSNKL--QSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + LT L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPSVVY-RLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPEEI 257
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + MLP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 105 LDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK + I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
>gi|260787565|ref|XP_002588823.1| hypothetical protein BRAFLDRAFT_89746 [Branchiostoma floridae]
gi|229273993|gb|EEN44834.1| hypothetical protein BRAFLDRAFT_89746 [Branchiostoma floridae]
Length = 2123
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L TL L N++ S +F + SL L + N+++ LP + + NL L L N
Sbjct: 127 LTSLGTLRLDFNEIDDLSDGVFSKLTSLILLYIDNNEISSLPSLIFSHLTNLQFLRLSDN 186
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI--NLAILDLSDNELTDVPCEL-S 116
I+++ + F LT LS+L L +N+IS + S V + + LDLSDN ++D+P L +
Sbjct: 187 HISDLPDGVFSHLTSLSILELNSNRISSLPSEVFLHLPRHFISLDLSDNLISDIPDGLFT 246
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ H+ L L GN I + ++I + + +H++ LD
Sbjct: 247 NRTHMYELTLSGNYISNLPDEIFLNLQ---THLERLYLD 282
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L L +N + +F + L L L N + +L V +D +L L L FN
Sbjct: 79 LTSLEELSLYNNHIRVLPAGVFSHLTRLKVLRLMNNHIAVLQDGVFSDLTSLGTLRLDFN 138
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
+I+++ + F LT L LL + NN+IS + S + L NL L LSDN ++D+P S
Sbjct: 139 EIDDLSDGVFSKLTSLILLYIDNNEISSLPSLIFSHLTNLQFLRLSDNHISDLPDGVFSH 198
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L L L L N I ++ +++
Sbjct: 199 LTSLSILELNSNRISSLPSEVF 220
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L+ L L+L+ N++ S +F+ + R L+LS N ++ +P + T+ ++ L L
Sbjct: 199 LTSLSILELNSNRISSLPSEVFLHLPRHFISLDLSDNLISDIPDGLFTNRTHMYELTLSG 258
Query: 59 NKINNMENDYFLTL-TKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL- 115
N I+N+ ++ FL L T L L L NN IS + S + L +L L LSDN + D+P +
Sbjct: 259 NYISNLPDEIFLNLQTHLERLYLDNNNISSLPSKIFSHLTSLEKLWLSDNHIPDLPDGMF 318
Query: 116 SSLFHLKSLFLGGNPIKTVRNDIL 139
S L LK L L N I + +++
Sbjct: 319 SDLTQLKELRLSQNQITDLPDEVF 342
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
+HL+ L L +N + S +F + SL +L LS N + LP + +D L L L N+
Sbjct: 274 THLERLYLDNNNISSLPSKIFSHLTSLEKLWLSDNHIPDLPDGMFSDLTQLKELRLSQNQ 333
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
I ++ ++ F LT L L+L NN IS + S +L +L L ++ N
Sbjct: 334 ITDLPDEVFSHLTSLDELHLDNNNISSLPSAFSNLTSLQALYIARN 379
>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
Length = 326
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L+H++L + LP I ++++L ELNL+ NQ T LP + + L L L ++
Sbjct: 87 LQKLQKLSLAHSRLTT--LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYS 144
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL N++ + +G L NL L L+ NELT +P E+ +L
Sbjct: 145 RLTTLPKEIG-KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQ 203
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L LG N + T+ I
Sbjct: 204 NLQELSLGSNQLTTLPEKI 222
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 8 LDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNME 65
LDLSHN+L + LP I +++ L L+L+ NQL LP + + L L LG N++ +
Sbjct: 1 LDLSHNRLTT--LPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLP 58
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ L L LNL +N+ + + +G+L L L L+ + LT +P E+ +L +L+ L
Sbjct: 59 KEIG-NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELN 117
Query: 126 LGGNPIKTVRNDI 138
L N T+ +I
Sbjct: 118 LNSNQFTTLPEEI 130
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 28/154 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L +LP I +++L L+L+ N+LT LP + +NL L LG N
Sbjct: 156 LQKLQKLNLYKNQL--KTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSN 213
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG-----------------------DLI 96
++ + + L KL L+L N++ + +G +L
Sbjct: 214 QLTTLP-EKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQ 272
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+L L+LS N L P E+ L LK L+LGGNP
Sbjct: 273 SLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNP 306
>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
niloticus]
Length = 570
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 133 LSGLVTLALSENSLTS--LPDSLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFN 190
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+I +E D L+KL++L+++ NKI ++ + +G+L +L LD++ N+L +P E+
Sbjct: 191 RITTVEKD-IRNLSKLTMLSIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIG 246
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP--VCT--------------- 46
L L++ N+L + LPL F S+ ELNL+ NQLT +P +C
Sbjct: 369 LSKLNMKDNQLTA--LPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLK 426
Query: 47 -------DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ + N+ L L L L NN+++ + +G L+NL
Sbjct: 427 KLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVLTNNQLTMLPRGIGHLLNLT 485
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N+L +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 486 HLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLTHLP 545
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 546 PQIVAGGPS 554
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L+ L L L NKL SLP + + L L LS N LT LP D K L L L N
Sbjct: 110 LTQLTELYLYSNKL--QSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + LT L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 168 KLREIPPVVY-RLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELC 226
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L +L + N ++ + +I
Sbjct: 227 SLITLDVAHNQLEHLPKEI 245
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 8 LDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNME 65
LDLS + +LP I ++ LTEL L N+L LP C L L L N + ++
Sbjct: 93 LDLSKRSI--HTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLP 150
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
D +L KL +L+L++NK+ E+ V L +L L L N +T V ++ +L L L
Sbjct: 151 -DSLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLS 209
Query: 126 LGGNPIKTVRNDI 138
+ N IK + +I
Sbjct: 210 IRENKIKQLPAEI 222
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +LT L L+ N PV + + L + N+IN + F LS LN
Sbjct: 314 LLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 373
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K+N+++ + + G ++ L+L+ N+LT +P ++ L L+ L L N +K + + I
Sbjct: 374 MKDNQLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGI 432
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 30 TELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
T L+LS + LP + LT L L NK+ ++ + L+ L L L N ++ +
Sbjct: 91 TRLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVG-CLSGLVTLALSENSLTSL 149
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISH 148
++ L L +LDL N+L ++P + L L +L+L N I TV DI SK +
Sbjct: 150 PDSLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLS 209
Query: 149 IKTSRL 154
I+ +++
Sbjct: 210 IRENKI 215
>gi|329909625|ref|ZP_08275099.1| hypothetical protein IMCC9480_3961 [Oxalobacteraceae bacterium
IMCC9480]
gi|327546427|gb|EGF31431.1| hypothetical protein IMCC9480_3961 [Oxalobacteraceae bacterium
IMCC9480]
Length = 759
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 14/162 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L LDL+HN+L LP F ++ SLT+L L N+LT LP D K+LT L L N
Sbjct: 167 LTSLTWLDLTHNQLTE--LPERFGELTSLTKLCLLSNKLTKLPEPFGDLKSLTWLNLNSN 224
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + F LT L L L +N ++E+ +G+L +L L LS+N+LT++P + +
Sbjct: 225 QLTELP-ERFGDLTSLIQLYLYDNHLTELPECIGELTSLTTLHLSNNQLTELPECIGKMP 283
Query: 120 HLKSLFLGGNPIKTVRNDI--------LQDSKRIISHIKTSR 153
L + + GNP+ + ++I DSK ++S + T+R
Sbjct: 284 SLCEINIYGNPLTFLPDEIRNIRVFNKWSDSKSLLS-LPTTR 324
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L L+L+ NKL LP F D+ SLT L+L++NQLT LP + +LT L L N
Sbjct: 144 LTSLIRLELNLNKLTK--LPERFGDLTSLTWLDLTHNQLTELPERFGELTSLTKLCLLSN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + F L L+ LNL +N+++E+ GDL +L L L DN LT++P + L
Sbjct: 202 KLTKLP-EPFGDLKSLTWLNLNSNQLTELPERFGDLTSLIQLYLYDNHLTELPECIGELT 260
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 261 SLTTLHLSNN 270
>gi|281207071|gb|EFA81255.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
PN500]
Length = 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP--VCT-------DCKNL 51
L +L+TLDL +N L+ D++P I + +L +L+LS N+L LP +CT +C N
Sbjct: 11 LVNLQTLDLRNNMLLIDNVPQEIGRLVNLKKLSLSGNRLVALPAEICTLTSLKELECANN 70
Query: 52 THL--------LLGFNKINNMENDY------FLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
L L G K+N N F ++L ++++K+N+I+E+ + +G L +
Sbjct: 71 QLLQIPGEIGNLTGLTKVNFSANKLTAIPASFGNFSELQIMDVKSNEIAELPNTLGGLKS 130
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND-ILQDSKRIISHIKTSRLDY 156
+ +DLS N LT++P E L + L + NP+ N +++ ++ II +K +
Sbjct: 131 ITKIDLSHNMLTELPWEFGDLTTMTVLDVSHNPLTLPPNPVVMKGTEAIIQWLKKFEKEG 190
Query: 157 HCQNVDGGGMSSQE 170
V G + ++E
Sbjct: 191 RKGKVSGLEIQTEE 204
>gi|118487532|gb|ABK95593.1| unknown [Populus trichocarpa]
Length = 371
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
Query: 26 MRSLTELNLSYNQLTMLP-----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
++ LT L++S+N L+ LP +C+ L L + NK++++ + L LT+L +L +
Sbjct: 199 LKHLTVLSVSHNNLSTLPSELGALCS----LRQLHVSNNKLSSLPMEIGL-LTQLEVLKV 253
Query: 81 KNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NN+IS V +GD +LA +DLS N LTD+P L +LK+L LG N +K++ + I +
Sbjct: 254 NNNRISNVPMCIGDCSSLAEVDLSSNLLTDLPVTFGDLLNLKALHLGNNGLKSLPSTIFK 313
>gi|126570552|gb|ABO21222.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 245
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 56 LTKLTFLNLEYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDRLTQLDKLYLGTN 115
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
+I ++ F LTKL++L L NN++ + + V D L NL L+L NEL VP
Sbjct: 116 QITSIPPRVFDKLTKLTVLWLNNNQLQSIPAGVFDKLTNLQTLNLQQNELQSVPHGAFDR 175
Query: 118 LFHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLDYHCQNVDG 163
L L+++ L NP I L D R+ + R D + DG
Sbjct: 176 LGKLQTITLRINPWDCSNCTILYLSDWIRVNDNKVKMRSDIDSPDPDG 223
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 31 ELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
E+N LT +P + T L FN + + F LTKL+ LNL+ N++ +S+
Sbjct: 16 EVNCQSKDLTSVPPGIP-PDTTSLDFRFNSFAQLPFNAFQGLTKLTFLNLEYNQLQTLSA 74
Query: 91 NV-GDLINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
V DL L L L++N+L +P + L L L+LG N I ++
Sbjct: 75 GVFDDLTELGTLGLANNQLASLPLGVFDRLTQLDKLYLGTNQITSI 120
>gi|395543598|ref|XP_003773704.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 4, partial [Sarcophilus harrisii]
Length = 926
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS L++L L N + S F + L L L N L+ +PV ++ +L L L N
Sbjct: 101 LSSLQSLRLDANHITSVPEESFEGLVQLRHLWLDDNSLSEVPVRPLSNLPSLQALTLALN 160
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSL 118
KI N+ + F L+ L +L+L NNKI + + D L NL LDL+ N L + P + +L
Sbjct: 161 KITNIPDFAFTNLSSLVVLHLHNNKIKTLGQHCFDGLDNLETLDLNYNNLGEFPQAIKAL 220
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY------------HCQNVDGGG 165
LK L N I + N + + + H+ + L Y H + G G
Sbjct: 221 PSLKELGFRSNYISIIPNGAFGGNPLLKTIHLNDNPLSYVGNSAFHNLSELHSLVIRGAG 280
Query: 166 MSS--QESTSEINIDKYKLDRTKTLTLCKVINIPESV 200
M T IN++ + TLT K+ +IP+++
Sbjct: 281 MVQGFPNLTGTINLE------SLTLTGTKISSIPDNL 311
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
+L++L L+ K+ S L D + L L+LSYN + LP C L + L N+I+
Sbjct: 293 NLESLTLTGTKISSIPDNLCQDRKKLKTLDLSYNNIQELPSFNGCSALEEISLQHNQIHE 352
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSS----NVGDLINLAILDLSDNELTDVPCE----- 114
++ F LT L +L+L N I EV + +G + N LD+S NELT P E
Sbjct: 353 IKESTFQGLTSLRILDLSRNLIQEVHNGAFIKLGSITN---LDISFNELTSFPTEGLNGL 409
Query: 115 ----LSSLFHLK 122
L+ FHLK
Sbjct: 410 NQLKLTGNFHLK 421
>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 377
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
++ LDLS +L +LP+ I +++L L L YNQLT+LP KNL L L N++
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 62 NNMENDY----------------------FLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ N+ L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 346 NLQTLYLNNNQFSS------QEKKRI 365
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
>gi|12054894|emb|CAC20842.1| receptor protein kinase [Pinus sylvestris]
Length = 1145
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 28/159 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT--MLPVCTDCKNLTHLLLGFNK- 60
+L++LDLSHN+L P ++++LT+L L N+LT + P +C L+ L LG N+
Sbjct: 438 NLQSLDLSHNRLTGSIPPSLFEIKNLTKLLLLSNELTGALPPEIGNCVALSRLRLGNNRL 497
Query: 61 -------INNMENDYFLTL----------------TKLSLLNLKNNKI-SEVSSNVGDLI 96
I +EN FL L ++L +L+L N++ E+ +G L
Sbjct: 498 LNQIPREIGKLENLVFLDLAMNQFSGSIPAEIGGCSQLQMLDLHGNRLGGELPRALGFLH 557
Query: 97 NLAILDLSDNELTD-VPCELSSLFHLKSLFLGGNPIKTV 134
L ++DLS NELT +P L +L L L L GN +
Sbjct: 558 GLQVVDLSANELTGLIPANLGNLVALTKLTLNGNALSGA 596
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTM-LPVC-TDCKNLTHLLLGFN 59
S LK +DLS N L S S+P F +++L+EL ++ N ++ +P +C LT + L N
Sbjct: 341 SSLKFVDLSTNSL-SGSIPDSFGSLKNLSELEITDNNVSGSIPAALANCTELTQIQLYNN 399
Query: 60 KINNMENDYFLTLTKLSLLNL-KNNKISEVSSNVGDLINLAILDLSDNELTD-VPCELSS 117
+I+ L KL++L L +NN + S++G NL LDLS N LT +P S
Sbjct: 400 QISGQMPAELGALKKLTVLFLWQNNLEGPIPSSLGSCDNLQSLDLSHNRLTGSIP---PS 456
Query: 118 LFHLKSL 124
LF +K+L
Sbjct: 457 LFEIKNL 463
>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 358
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + P I+ ++SL +L LS NQLT+LPV +NL L L N
Sbjct: 72 LKNLQELFLNYNQLTT--FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ +S +G L NL L LS+N+LT P E+ L
Sbjct: 130 QLKTISKE-IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 188
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T +I
Sbjct: 189 NLQELYLSNNQLTTFPKEI 207
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 210 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+LT +P E+ L
Sbjct: 268 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 326
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 327 NLQTLYLRNN 336
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 164 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 222 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 280
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 281 NLKMLSLDANQLTALPKEI 299
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L L +N+L + S + +++L L LS NQLT P +NL L L N+
Sbjct: 141 LKNLQKLYLDNNQLTALSKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 199
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L +
Sbjct: 200 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 258
Query: 121 LKSLFLGGNPIKTV 134
L+ LFL N KT+
Sbjct: 259 LQVLFLSYNQFKTI 272
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT L +NL L L N+
Sbjct: 118 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQ 176
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 177 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 235
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 236 LQELNLDVNQLTTIPKEIGQ 255
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ LFL N + T +I
Sbjct: 34 LSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 93
Query: 140 Q 140
Q
Sbjct: 94 Q 94
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L + +P I +++L L LSYNQ +PV KNL L L N
Sbjct: 233 LQKLQELNLDVNQLTT--IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L +LNL N+++ + +G L NL L L +N+L+
Sbjct: 291 QLTALPKEIG-KLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 339
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 28/138 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL LP I +++L L+LS NQL +LP KNL L L +N++
Sbjct: 29 VRVLILSEQKL--KVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL- 85
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L +L L LS+N+LT +P E+ L +L+
Sbjct: 86 -----------------------TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQ 122
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N +KT+ +I Q
Sbjct: 123 ELNLWNNQLKTISKEIEQ 140
>gi|421092581|ref|ZP_15553316.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410364610|gb|EKP15628.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456888014|gb|EMF99018.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 181
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L++L+L +N+L + LP I ++ L L L NQLT LP KNL L L
Sbjct: 20 QLKNLRSLELYNNQLTA--LPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNE 77
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + N+ L++L LNL N+++ + + +G L L LDLS+N+LT +P E+ L
Sbjct: 78 NQITILPNEVG-NLSELEELNLSGNRLTTLPNEIGQLQKLRSLDLSNNQLTTLPKEIGHL 136
Query: 119 FHLKSLFLGGN 129
+L+ L L GN
Sbjct: 137 KNLRRLVLKGN 147
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+ EL+L NQLT+LP KNL L L N++ + N+ L L L L NN+++
Sbjct: 1 MQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIG-QLKDLRSLELYNNQLTT 59
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+ +G L NL L L++N++T +P E+ +L L+ L L GN + T+ N+I Q K
Sbjct: 60 LPEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTTLPNEIGQLQK 115
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L L L NQLT LP K+L L L N++ + + L L L L N
Sbjct: 20 QLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIG-RLKNLQKLYLNEN 78
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
+I+ + + VG+L L L+LS N LT +P E+ L L+SL L N + T+ +I L++
Sbjct: 79 QITILPNEVGNLSELEELNLSGNRLTTLPNEIGQLQKLRSLDLSNNQLTTLPKEIGHLKN 138
Query: 142 SKRII 146
+R++
Sbjct: 139 LRRLV 143
>gi|395835353|ref|XP_003790646.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3 [Otolemur garnettii]
Length = 1110
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C++L+ L L FN
Sbjct: 253 LSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAIRRISPDAWEFCQHLSELDLTFN 312
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
+++ +++ FL L+ L+ L++ NN++S ++ L +L LDL +NE++ D+
Sbjct: 313 QLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGA 372
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 373 FSGLDKLRRLILQGNRIRSI 392
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
S + LDLSHN+L + SL E+ L+ N+L +P + N+T L L N+I
Sbjct: 65 SWVARLDLSHNRLSFIKASSMSHLPSLREVKLNNNELESIPNLGPVSANITLLSLAGNRI 124
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL------IN------------------ 97
+ D+ L L+L NN ISE+ + L IN
Sbjct: 125 VEILPDHLKEFQSLETLDLSNNNISELKTAFPPLQLKYLYINSNRVTSVEPGCFDSLANT 184
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L +L L+ N L+ +P ++ L L+ L L N IK V
Sbjct: 185 LLVLKLNKNRLSAIPPKMFKLPQLQHLELNRNKIKNV 221
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
LK L ++ N++ S F + +L L L+ N+L+ +P L HL L NKI
Sbjct: 159 QLKYLYINSNRVTSVEPGCFDSLANTLLVLKLNKNRLSAIPPKMFKLPQLQHLELNRNKI 218
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSSLF 119
N++ F L L L ++ N ++ + L N+ IL L N LT++ L L
Sbjct: 219 KNVDGLTFQGLGALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLL 278
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRLD 155
L+ L L N I+ + D + + + ++ + SRLD
Sbjct: 279 MLQELHLSQNAIRRISPDAWEFCQHLSELDLTFNQLSRLD 318
>gi|340710396|ref|XP_003393777.1| PREDICTED: leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein
2-like [Bombus terrestris]
Length = 908
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ +DLS N+L +F +SL L+LS N L LP KNL L+L N
Sbjct: 166 LDWLEEIDLSRNRLSVLPYQVFALSKSLARLDLSGNLLVSLPDHSFRPNKNLQELVLSAN 225
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
++ + F L +L +L L +N+I V + GDL++L LDLS N +T + S
Sbjct: 226 RLTKLPPRLFSGLNQLKILELADNEIDTVPRGLFGDLVSLQHLDLSGNPITRLTSITFHS 285
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN- 176
L +L+ L L P+ + D+ + +++ + + + +N D G+ E T E+N
Sbjct: 286 LSNLRWLSLKNLPVTVLPYDVWRPVRKLRTLLLSGTRLEALRNEDLKGLDKLE-TLEVNN 344
Query: 177 -----IDKYKLDRTKTL 188
I + LDRT L
Sbjct: 345 SPLREISRCTLDRTPAL 361
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLT------------------- 40
L+ LK L+L+ N++ D++P LF D+ SL L+LS N +T
Sbjct: 238 LNQLKILELADNEI--DTVPRGLFGDLVSLQHLDLSGNPITRLTSITFHSLSNLRWLSLK 295
Query: 41 -----MLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
+LP V + L LLL ++ + N+ L KL L + N+ + E+S
Sbjct: 296 NLPVTVLPYDVWRPVRKLRTLLLSGTRLEALRNEDLKGLDKLETLEVNNSPLREISRCTL 355
Query: 94 DLI-NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
D L +DL D+ LT +P ++ L L L L GNP
Sbjct: 356 DRTPALRKIDLRDSNLTFLPANVAQLSFLSELQLQGNP 393
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--------------------- 43
L L+L N+L +F ++ L LNL+ N+LT LP
Sbjct: 121 LAHLNLGDNRLTELPSDVFHPLQQLQYLNLTGNRLTTLPRASFQGLDWLEEIDLSRNRLS 180
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN- 97
V K+L L L N + ++ + F L L L N+++++ + +N
Sbjct: 181 VLPYQVFALSKSLARLDLSGNLLVSLPDHSFRPNKNLQELVLSANRLTKLPPRLFSGLNQ 240
Query: 98 LAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPI 131
L IL+L+DNE+ VP L L L+ L L GNPI
Sbjct: 241 LKILELADNEIDTVPRGLFGDLVSLQHLDLSGNPI 275
>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 305
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L++N+L + P I+ ++SL +L LS NQLT+LPV +NL L L N
Sbjct: 19 LKNLQELFLNYNQLTT--FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 76
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ +S +G L NL L LS+N+LT P E+ L
Sbjct: 77 QLKTISKE-IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 135
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T +I
Sbjct: 136 NLQELYLSNNQLTTFPKEI 154
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 157 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+LT +P E+ L
Sbjct: 215 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 273
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 274 NLQTLYLRNN 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 111 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 168
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 169 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 227
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 228 NLKMLSLDANQLTALPKEI 246
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L L +N+L + S + +++L L LS NQLT P +NL L L N+
Sbjct: 88 LKNLQKLYLDNNQLTALSKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQ 146
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L +
Sbjct: 147 LTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQN 205
Query: 121 LKSLFLGGNPIKTV 134
L+ LFL N KT+
Sbjct: 206 LQVLFLSYNQFKTI 219
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT L +NL L L N+
Sbjct: 65 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQ 123
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 124 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 182
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 183 LQELNLDVNQLTTIPKEIGQ 202
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS NQL +LP KNL L L +N++ +
Sbjct: 2 LDLSDNQLIILPKEIRQLKNLQELFLNYNQL------------------------TTFPK 37
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ L +L L LS+N+LT +P E+ L +L+ L L N +KT+ +I Q
Sbjct: 38 EIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQ 87
>gi|290957973|ref|YP_003489155.1| hypothetical protein SCAB_35131 [Streptomyces scabiei 87.22]
gi|260647499|emb|CBG70604.1| putative leucine-rich repeat protein [Streptomyces scabiei 87.22]
Length = 307
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 29 LTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L ELNL +N+LT +P C D +T L+L NK+ + LT+L+ L L N+++
Sbjct: 183 LVELNLDFNELTAIPACLGDLTRMTQLMLYGNKLTELP-PTLRKLTRLTFLALGENRLAS 241
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
V +G+L L L L+DN LT +P +L L+ L +GG
Sbjct: 242 VPEWLGELTELETLWLTDNVLTTLPDSFGALTRLEILEMGG 282
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L HL LDL+ N L D+LP +I D+ +L L++ N LT LP
Sbjct: 42 LRHLTGLDLNQNNL--DALPEWIGDLGALKSLSVQENSLTSLP----------------- 82
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ LT+L+ LNL +N+++ V VGDL L L L NELT++P L L
Sbjct: 83 ------ESIGRLTRLTELNLYHNELASVPPYVGDLTGLTRLMLDGNELTELPPTLRKLTR 136
Query: 121 LKSLFLGGN 129
L L LG N
Sbjct: 137 LTFLSLGEN 145
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L L+L HN+L S +P ++ D+ LT L L N+LT LP LT L LG N
Sbjct: 88 LTRLTELNLYHNELAS--VPPYVGDLTGLTRLMLDGNELTELPPTLRKLTRLTFLSLGEN 145
Query: 60 KINNMEN----------------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
++ + + LT+L LNL N+++ + + +GDL
Sbjct: 146 QLGELPEWIGELVALERLLAMRNGLTGIPESIGRLTRLVELNLDFNELTAIPACLGDLTR 205
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ L L N+LT++P L L L L LG N + +V
Sbjct: 206 MTQLMLYGNKLTELPPTLRKLTRLTFLALGENRLASV 242
>gi|253401386|gb|ACT31452.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
++ RT T
Sbjct: 229 SDGRVVRTVT 238
>gi|347972785|ref|XP_320221.4| AGAP012326-PA [Anopheles gambiae str. PEST]
gi|333469691|gb|EAA00348.4| AGAP012326-PA [Anopheles gambiae str. PEST]
Length = 1268
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL------TMLPVCTDCKNLTHLL 55
L L L+L+HN L F ++ L L+L N + LPV NL L
Sbjct: 289 LIRLVVLNLAHNALTRIDARTFAELYFLQILDLRNNSIGYIEDNAFLPV----YNLHTLN 344
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE 114
L N+++ +++ F L LS L L NN IS V NV + +L LDLS N+LT+VP
Sbjct: 345 LAENRLHTLDDRLFNGLFVLSKLTLNNNLISIVEPNVFRNCSDLKELDLSSNQLTEVPYA 404
Query: 115 LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQNVDGGGMSSQESTS 173
+ L L++L LG N I + N + ++ + RL D +NV G + S
Sbjct: 405 IRDLSMLRALDLGENQIARIENGTFAN----LNQLTGLRLIDNQIENVTVGMFADLPRLS 460
Query: 174 EINIDKYKLDRTKTLTLCKVINIPESVYMRG 204
+N+ K ++ + + + ++I E++ + G
Sbjct: 461 VLNLAKNRVQNIERGSFDRNLDI-EAIRLDG 490
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 26/261 (9%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
S LK LDLS N+L +P I D+ L L+L NQ+ + T + LT L L N
Sbjct: 386 SDLKELDLSSNQLTE--VPYAIRDLSMLRALDLGENQIARIENGTFANLNQLTGLRLIDN 443
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL-INLAILDLSDNELTDVPCELSSL 118
+I N+ F L +LS+LNL N++ + D +++ + L N LTD+ ++L
Sbjct: 444 QIENVTVGMFADLPRLSVLNLAKNRVQNIERGSFDRNLDIEAIRLDGNFLTDINGIFATL 503
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
L L L N + + D I S++K LD H ++ G + + EI +
Sbjct: 504 ASLLWLNLAENHL------VWFDYAFIPSNLKW--LDIHGNYIESLG-NYYKLQEEIKVK 554
Query: 179 KYKLDRTKTLTLCKVINIPESVYMRGMSSQEC-TIEIN--IDKYKLDRT-------KTLT 228
+ LT +N+P SV + ++ TI N IDK L R K L
Sbjct: 555 TLDASHNR-LTDLGPMNVPNSVELLFVNDNHIGTIHANTFIDKVNLARVDLYANALKKLQ 613
Query: 229 LCKVINIPESVYMNRPFALTY 249
L ++ P RP Y
Sbjct: 614 LHQLRVAPAPPTTERPLPEFY 634
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L+L N + + SL LNLSYN L LP + ++L + L N
Sbjct: 191 LRRLQHLNLEFNNISEVHGDALAGLGSLRTLNLSYNHLETLPGGLFAGSRDLREIHLQGN 250
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD---LINLAILDLSDNELTDVPCE-L 115
+I + F L +L +L+L N++S + G LI L +L+L+ N LT +
Sbjct: 251 QIYELPRGLFHRLEQLLVLDLSRNQLSSHHVDNGTFSGLIRLVVLNLAHNALTRIDARTF 310
Query: 116 SSLFHLKSLFLGGNPIKTVRND 137
+ L+ L+ L L N I + ++
Sbjct: 311 AELYFLQILDLRNNSIGYIEDN 332
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
L L+TL+LS+N L ++LP LF R L E++L NQ+ LP + + L L L
Sbjct: 215 LGSLRTLNLSYNHL--ETLPGGLFAGSRDLREIHLQGNQIYELPRGLFHRLEQLLVLDLS 272
Query: 58 FNKI--NNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-C 113
N++ ++++N F L +L +LNL +N ++ + + +L L ILDL +N + +
Sbjct: 273 RNQLSSHHVDNGTFSGLIRLVVLNLAHNALTRIDARTFAELYFLQILDLRNNSIGYIEDN 332
Query: 114 ELSSLFHLKSLFLGGNPIKTV 134
+++L +L L N + T+
Sbjct: 333 AFLPVYNLHTLNLAENRLHTL 353
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-------CTDCKNLTHL 54
L L++LDLS N + + + L LNL+ N+ C L L
Sbjct: 113 LKELQSLDLSDNNIRALPDGFLCPLTGLKVLNLTNNRFRSAEALGLAEKSCPGGSELQAL 172
Query: 55 LLGFNKINNMENDYFLT-LTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVP 112
L +N++ ++ + ++ L +L LNL+ N ISEV + + L +L L+LS N L +P
Sbjct: 173 NLAYNELRSVPTGWGVSKLRRLQHLNLEFNNISEVHGDALAGLGSLRTLNLSYNHLETLP 232
Query: 113 CEL-SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQES 171
L + L+ + L GN I + + ++++ + SR +VD G S
Sbjct: 233 GGLFAGSRDLREIHLQGNQIYELPRGLFHRLEQLLV-LDLSRNQLSSHHVDNGTFSGLIR 291
Query: 172 TSEINIDKYKLDRTKTLTLCKV 193
+N+ L R T ++
Sbjct: 292 LVVLNLAHNALTRIDARTFAEL 313
>gi|428312055|ref|YP_007123032.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
gi|428253667|gb|AFZ19626.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
Length = 171
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 7 TLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
+L+LS KL + LP I ++ LT L+L NQLT LP + LT L LG N++ +
Sbjct: 20 SLNLSEKKLTT--LPKEIGNLTHLTALDLYNNQLTTLPKAIGNLTRLTQLYLGSNQLTTL 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ +LT L L L +N+++ + +G+ NL L L N+L +P E+S+L +L +L
Sbjct: 78 PKEIG-SLTHLIQLFLSDNQLTALPKEIGNFTNLMQLHLRHNQLKVLPKEISNLTNLTAL 136
Query: 125 FLGGNPIKTVRNDILQDSKRII 146
L NP+ + +I+Q ++I
Sbjct: 137 SLRDNPLTSPPQEIVQQGAQVI 158
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 23/109 (21%)
Query: 30 TELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
T LNLS +LT LP + NLTHL + L+L NN+++ +
Sbjct: 19 TSLNLSEKKLTTLP--KEIGNLTHL---------------------TALDLYNNQLTTLP 55
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+G+L L L L N+LT +P E+ SL HL LFL N + + +I
Sbjct: 56 KAIGNLTRLTQLYLGSNQLTTLPKEIGSLTHLIQLFLSDNQLTALPKEI 104
>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
2006001855]
Length = 456
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++++LTEL LS NQLT P + +NLT L L N++ + L L +L L NN
Sbjct: 303 ELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKK-IEKLKNLQVLILNNN 361
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+++ + + +G+L NL +L L++N+LT +P E+ L +L+ L L N ++ + +I
Sbjct: 362 QLTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEI 416
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L L LS+N+L + P I ++++LTEL LS NQL LP + KNL L+L N
Sbjct: 304 LQNLTELYLSNNQLTT--FPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNN 361
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L +L L NN+++ + + +G+L NL L+LS N+L +P E+ L
Sbjct: 362 QLTTIPNEIG-ELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLK 420
Query: 120 HLKSLFLGGNP 130
+L+ L+L P
Sbjct: 421 NLQELYLDDIP 431
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPL-FIDMRSLTELNLSYNQL 39
L +L+ LDL+HN+L + ++P F ++SL L LS NQL
Sbjct: 143 LQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQL 202
Query: 40 TMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
LP D K+L L L N++ + + L KL L L NN++ + +G L NL
Sbjct: 203 KTLPKEFGDLKSLQVLYLSNNQLKTLPKE-IRKLKKLQELALYNNQLKTLPKEIGKLQNL 261
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+L LS N+L +P E L L+ L+L + T N+I
Sbjct: 262 QVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEI 301
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS+N+L +LP I ++ L EL L NQL LP +NL L L +N
Sbjct: 212 LKSLQVLYLSNNQL--KTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSYN 269
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + F L L L L N +++ + +G+L NL L LS+N+LT P E+ L
Sbjct: 270 QLKKLPKE-FGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQ 328
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L L+L N ++ + I
Sbjct: 329 NLTELYLSNNQLQALPKKI 347
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L +L+L++NQL +P +NL L L N++ + + F L L +L L NN
Sbjct: 142 KLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKE-FGKLKSLQVLYLSNN 200
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ + GDL +L +L LS+N+L +P E+ L L+ L L N +KT+ +I
Sbjct: 201 QLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEI 255
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L KL L+ NN++ + +G L NL LDL+ N+L +P E+ L +L+ L L GN +
Sbjct: 120 LKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQL 179
Query: 132 KTV 134
KT+
Sbjct: 180 KTI 182
>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
Length = 582
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL L+ N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALNENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L L++N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|449274487|gb|EMC83629.1| Leucine-rich repeat and death domain-containing protein, partial
[Columba livia]
Length = 871
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 19 SLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
SLP I ++R LT L+LS+N L+ LP C +L LL+ N + + + F +L+KL+
Sbjct: 80 SLPPDIGNLRCLTHLDLSFNSLSTLPSCILHLPSLCVLLVSHNSLVALPKN-FDSLSKLT 138
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+ N++ ++ ++G+L L LDLS+N L +P E+ +L + L L GN + ++ +
Sbjct: 139 FFSAMKNQLKDLPQSIGELAVLQNLDLSENALEFLPEEVGNLHNCTELDLSGNRLSSIPD 198
Query: 137 DI--LQDSKRIISH 148
+ L+ +R+ H
Sbjct: 199 SLANLKSLRRLHLH 212
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L N+L LP I ++ L L+LS N L LP + N T L L N
Sbjct: 134 LSKLTFFSAMKNQL--KDLPQSIGELAVLQNLDLSENALEFLPEEVGNLHNCTELDLSGN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL--SS 117
+++++ D L L L+L +N + V +++ L NL+ LDL +N L VP E+ S
Sbjct: 192 RLSSIP-DSLANLKSLRRLHLHSNLLVTVPASLASLPNLSRLDLQNNCLRAVPPEIQTSP 250
Query: 118 LFHLKSLFLGGNPI 131
HL+ GNP+
Sbjct: 251 FVHLR-----GNPL 259
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L LDLS N+ +SD + + ++ +LT + LS NQ++ + V ++ NLT L LG+N+I
Sbjct: 158 LTNLTVLDLSDNQ-ISD-IKVLSNLTNLTSVKLSENQISDIEVLSNLTNLTVLDLGYNQI 215
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++++ LT L+ L+L NN+I ++ + +L NL L L DN+++D+ LS+L +L
Sbjct: 216 SDIK--VLSNLTNLTYLSLWNNQIGDIKV-LSNLTNLTSLSLWDNQISDIK-PLSNLTNL 271
Query: 122 KSLFLGGNPIKTVR 135
SL+L N I ++
Sbjct: 272 TSLYLWDNQISDIK 285
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 89/134 (66%), Gaps = 6/134 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L TLDLS N+ +SD PL ++ +LT+++LS NQ++ + V ++ NLT + L N+I
Sbjct: 92 LTNLTTLDLSENQ-ISDIKPLS-NLTNLTDIDLSSNQISDIKVLSNLTNLTDIDLSKNQI 149
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++++ LT L++L+L +N+IS++ + +L NL + LS+N+++D+ LS+L +L
Sbjct: 150 SDIK--VLSNLTNLTVLDLSDNQISDIKV-LSNLTNLTSVKLSENQISDIEV-LSNLTNL 205
Query: 122 KSLFLGGNPIKTVR 135
L LG N I ++
Sbjct: 206 TVLDLGYNQISDIK 219
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L LDLS N+ + D PL ++ SLT L+LS NQ+ + ++ NLT L L N+
Sbjct: 312 LTNLTDLDLSKNQ-IGDIKPLS-NLTSLTSLDLSKNQIADIKPLSNLTNLTSLSLWRNQS 369
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++E LT L+ L+L N+IS++ + +L NL +DLS+N+++D+ LS+L L
Sbjct: 370 IDIE--LLSNLTNLTSLDLSENQISDIKP-LSNLTNLTDIDLSENQISDIK-PLSNLTKL 425
Query: 122 KSLFLGGNPI 131
+ L + NPI
Sbjct: 426 EDLQIQNNPI 435
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 84/134 (62%), Gaps = 6/134 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L +DLS N+ +SD + + ++ +LT L+LS NQ++ + V ++ NLT + L N+I
Sbjct: 136 LTNLTDIDLSKNQ-ISD-IKVLSNLTNLTVLDLSDNQISDIKVLSNLTNLTSVKLSENQI 193
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++E LT L++L+L N+IS++ + +L NL L L +N++ D+ LS+L +L
Sbjct: 194 SDIE--VLSNLTNLTVLDLGYNQISDIKV-LSNLTNLTYLSLWNNQIGDIKV-LSNLTNL 249
Query: 122 KSLFLGGNPIKTVR 135
SL L N I ++
Sbjct: 250 TSLSLWDNQISDIK 263
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 16 VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKL 75
+SD PL ++ +LT L+LS NQ++ + ++ NLT + L N+I++++ LT L
Sbjct: 83 ISDIKPLS-NLTNLTTLDLSENQISDIKPLSNLTNLTDIDLSSNQISDIK--VLSNLTNL 139
Query: 76 SLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
+ ++L N+IS++ + +L NL +LDLSDN+++D+ LS+L +L S+ L N I +
Sbjct: 140 TDIDLSKNQISDIKV-LSNLTNLTVLDLSDNQISDIKV-LSNLTNLTSVKLSENQISDIE 197
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L++L +L L N+ +SD PL ++ +LT L L NQ++ + ++ NLT+L L N+I
Sbjct: 246 LTNLTSLSLWDNQ-ISDIKPLS-NLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQI 303
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+++ LT L+ L+L N+I ++ + +L +L LDLS N++ D+ LS+L +L
Sbjct: 304 ADIK--PLSNLTNLTDLDLSKNQIGDIKP-LSNLTSLTSLDLSKNQIADIK-PLSNLTNL 359
Query: 122 KSLFLGGN 129
SL L N
Sbjct: 360 TSLSLWRN 367
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 30 TELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
+ELNL ++++ + ++ NLT L L N+I++++ LT L+ ++L +N+IS++
Sbjct: 74 SELNLESSEISDIKPLSNLTNLTTLDLSENQISDIK--PLSNLTNLTDIDLSSNQISDIK 131
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
+ +L NL +DLS N+++D+ LS+L +L L L N I ++
Sbjct: 132 V-LSNLTNLTDIDLSKNQISDIKV-LSNLTNLTVLDLSDNQISDIK 175
>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
lupus familiaris]
gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
melanoleuca]
gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
catus]
gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
Length = 582
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL L+ N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALNENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L L++N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|399023651|ref|ZP_10725706.1| hypothetical protein PMI13_01647 [Chryseobacterium sp. CF314]
gi|398082350|gb|EJL73104.1| hypothetical protein PMI13_01647 [Chryseobacterium sp. CF314]
Length = 293
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+++L LNLS NQ+ L KNLT+L L N I+ + F + KL LNL N I
Sbjct: 170 IKNLKFLNLSANQINDLGNLEFPKNLTYLELQQNAISVLPETLFRS-KKLEFLNLSQNNI 228
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+S + L N+ ++L++N L D+P E+S + +LK+L L GNPI+
Sbjct: 229 KVISPEIKGLKNVVSMNLANNGLKDLPSEISQMKNLKTLILTGNPIE 275
>gi|124009177|ref|ZP_01693859.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123985275|gb|EAY25202.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 861
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 27 RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
R L EL+++++QLT +P + L L+L +IN + L +L L+L +NK+
Sbjct: 720 RQLEELSMNFHQLTAIPAHISKFTKLRVLILSHGQINQIAPS-ITQLGRLEKLDLMDNKL 778
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
+EV +G + +L L L DN+LT +P E+ L L+ L LG NP+ + ++ + + I
Sbjct: 779 TEVPGFIGQMTSLESLILRDNQLTTLPPEIGQLTQLRVLNLGNNPLTALPEELTRLTNLI 838
Query: 146 ISHIKTSRL 154
++ L
Sbjct: 839 YVNVSDKTL 847
Score = 41.2 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNL--SYNQLTMLPVCTDCKNLTHLLLG- 57
L +L+ L H + LP F ++ L L+L S N +LP T L G
Sbjct: 204 LKNLECLYFCHPMEADEKLPTRFTRLKHLKVLHLFPSANIADILPEFTQLTVLDMARWGW 263
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
F+ + ++ L L KL L+L N+ + ++ + L L LDL N + D+P L+
Sbjct: 264 FDNAPDTLPEWMLALDKLEYLSLHENRFTYLTPGIARLHRLRCLDLDGNLMKDMPPGLAD 323
Query: 118 LFH 120
+FH
Sbjct: 324 IFH 326
>gi|260832370|ref|XP_002611130.1| hypothetical protein BRAFLDRAFT_88471 [Branchiostoma floridae]
gi|229296501|gb|EEN67140.1| hypothetical protein BRAFLDRAFT_88471 [Branchiostoma floridae]
Length = 954
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L LS+N++ F+++ L EL LS+N++TML + L L L +N
Sbjct: 104 LPQLQKLSLSYNQITLIQEGTFVNLAQLQELKLSHNKITMLQNGAFVNLPQLKTLFLSYN 163
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
I + F+ + +L LNL +N+I+++ + +L L +L LS N++T + + ++
Sbjct: 164 NIAMIREGVFVNVPQLQYLNLFSNQITKIQPDAFANLPGLRVLSLSHNKITKIKEDAFAN 223
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L+ L+LG N I T+ I +
Sbjct: 224 LSGLRVLWLGKNKITTINPGIFAN 247
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L+ L L N++ F+++ L +L+LSYNQ+T++ T + L L L N
Sbjct: 80 LPQLQKLSLHKNQITMIQEGAFVNLPQLQKLSLSYNQITLIQEGTFVNLAQLQELKLSHN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSS 117
KI ++N F+ L +L L L N I+ + V ++ L L+L N++T + P ++
Sbjct: 140 KITMLQNGAFVNLPQLKTLFLSYNNIAMIREGVFVNVPQLQYLNLFSNQITKIQPDAFAN 199
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L+ L L N I ++ D +
Sbjct: 200 LPGLRVLSLSHNKITKIKEDAFAN 223
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ L L+ NK+ F+++ L +L+L YNQ+TM+ + L L L NKI
Sbjct: 299 LQVLLLTSNKITLIQKGTFVNLTRLRKLSLYYNQITMIQPGAFANLPGLLELNLSRNKIT 358
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV--------PC 113
++ D F L+ L L L NNKI+ + + + L L L++N+++ + PC
Sbjct: 359 KIKEDAFANLSGLRELWLVNNKITTIKPGIFAKIPQLQKLYLTNNKMSAIAPLAFSLLPC 418
Query: 114 EL 115
L
Sbjct: 419 NL 420
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 28/166 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT----------DCKN- 50
LS L+ L L NK+ + + +F ++ L +L+L NQ+T++ T D N
Sbjct: 224 LSGLRVLWLGKNKITTINPGIFANLPWLEKLHLWGNQITLIQEGTFVNLAQLQELDLSNN 283
Query: 51 ---------------LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GD 94
L LLL NKI ++ F+ LT+L L+L N+I+ + +
Sbjct: 284 KITLIPPGAFAKFTLLQVLLLTSNKITLIQKGTFVNLTRLRKLSLYYNQITMIQPGAFAN 343
Query: 95 LINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDIL 139
L L L+LS N++T + + ++L L+ L+L N I T++ I
Sbjct: 344 LPGLLELNLSRNKITKIKEDAFANLSGLRELWLVNNKITTIKPGIF 389
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
S + L L+HN + F+++ L +L+L NQ+TM+ + L L L +N+
Sbjct: 57 SSITDLYLNHNNIAMIREGAFVNLPQLQKLSLHKNQITMIQEGAFVNLPQLQKLSLSYNQ 116
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++ F+ L +L L L +NKI+ + + G +NL
Sbjct: 117 ITLIQEGTFVNLAQLQELKLSHNKITMLQN--GAFVNLP--------------------Q 154
Query: 121 LKSLFLGGNPIKTVRNDIL 139
LK+LFL N I +R +
Sbjct: 155 LKTLFLSYNNIAMIREGVF 173
>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
domestica]
Length = 582
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL +L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCI 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 25/146 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
S + +L++ HN++ +F + L++LN+ NQLT LP+
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL------------------ 396
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
F T T + LNL N+++++ +V L++L +L LS+N L +P L +L L+
Sbjct: 397 -----DFGTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLR 451
Query: 123 SLFLGGNPIKTVRNDI--LQDSKRII 146
L L N ++++ N+I L+D ++++
Sbjct: 452 ELDLEENKLESLPNEIAYLKDLQKLV 477
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQL +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLNNLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N L +P E+ +L +L+ L+L NP + + ++ SK I I+ L +
Sbjct: 498 HLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +L L L+ N PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+L +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKL 440
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+L+ L L +NK+ + + VG L+NL L LS+N LT +P L +L L+ L L N +
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 132 KTV 134
+ +
Sbjct: 182 REI 184
>gi|449488171|ref|XP_002193093.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
[Taeniopygia guttata]
Length = 611
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ LDLS+NKL F +R L L+L N L +P V DC+NL L LG+N++
Sbjct: 156 LRNLDLSYNKLQVLQAEQFKGLRKLLILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLR 215
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSLF-H 120
++ + F L KL+ L+L++N+ S+++ ++ L NL + L N + + L+ +
Sbjct: 216 SLSRNAFAGLLKLTELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSS 275
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L +L L GN I V Q
Sbjct: 276 LHNLDLSGNDIAGVEPGTFQ 295
>gi|410964997|ref|XP_003989039.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3 [Felis catus]
Length = 1307
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
LS+++ L L HN L + + L EL+LS N + + P + C+ L+ L L FN
Sbjct: 450 LSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFN 509
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT----DVPCE 114
++ +++ FL L+ L+ L++ NNK+S ++ L +L LDL +NE++ D+
Sbjct: 510 HLSRLDDSSFLGLSLLNTLHIGNNKVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGA 569
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
S L L+ L L GN I+++
Sbjct: 570 FSGLDKLRRLILQGNRIRSI 589
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
LDLSHN+L ++SL E+ L+ N+L +P + N+T L L N+I +
Sbjct: 267 LDLSHNRLSLIKANSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEVLP 326
Query: 67 DYFLTLTKLSLLNLKNNKISE--------------VSSN---------VGDLIN-LAILD 102
++ L L+L +N ISE ++SN L N L +L
Sbjct: 327 EHLKQFQSLETLDLSSNNISELKIPLPPLQLKYLYINSNRVTSMEPGYFDSLANTLLVLK 386
Query: 103 LSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ N + +P ++ L L+ L L N I+ V
Sbjct: 387 LNRNRIPAIPPKMFKLSQLQHLELNRNKIRNV 418
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+++ L L+ N++V + LP + +SL L+LS N ++ L + L +L + N++
Sbjct: 309 ANITLLSLAGNRIV-EVLPEHLKQFQSLETLDLSSNNISELKIPLPPLQLKYLYINSNRV 367
Query: 62 NNMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP-CELSSLF 119
+ME YF +L L +L L N+I + + L L L+L+ N++ +V L
Sbjct: 368 TSMEPGYFDSLANTLLVLKLNRNRIPAIPPKMFKLSQLQHLELNRNKIRNVDGLTFQGLG 427
Query: 120 HLKSLFLGGNPI 131
LKSL + N +
Sbjct: 428 ALKSLKMQRNGV 439
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 30/181 (16%)
Query: 5 LKTLDLSHNKLVSDSLPL--------FIDMRSLTELNLSY-----NQLTML--------- 42
L+TLDLS N + +PL +I+ +T + Y N L +L
Sbjct: 335 LETLDLSSNNISELKIPLPPLQLKYLYINSNRVTSMEPGYFDSLANTLLVLKLNRNRIPA 394
Query: 43 --PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLA 99
P L HL L NKI N++ F L L L ++ N ++++ L N+
Sbjct: 395 IPPKMFKLSQLQHLELNRNKIRNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNME 454
Query: 100 ILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDILQDSKRI----ISHIKTSRL 154
IL L N LT++ L L L+ L L N I + D + +++ ++ SRL
Sbjct: 455 ILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRL 514
Query: 155 D 155
D
Sbjct: 515 D 515
>gi|348515009|ref|XP_003445032.1| PREDICTED: keratocan-like [Oreochromis niloticus]
Length = 343
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L LDL NKL+ DS+ + +L ++NL+ NQL+ +P+ + T L L N
Sbjct: 157 LDKLTLLDLQGNKLMDDSVTEVSLKGLNNLVQINLAKNQLSTMPLGLP-PSTTQLFLDGN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
I + YF L K++ L L +NK+ S V NV ++ ++ L LS N+LTDVP S
Sbjct: 216 NIEKIPPGYFKGLPKVAFLRLNHNKLASSGVPKNVFNISSILDLQLSHNQLTDVPLIPSG 275
Query: 118 LFHLKSLFLGGNPIKTV 134
L H L L N IKTV
Sbjct: 276 LEH---LHLDHNKIKTV 289
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 3 SHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ L+ L+L+ NK+ S+ + + M L L + N L+ +P +L HL L N+
Sbjct: 87 TQLRWLNLNRNKITSEGVEEGVLGAMTHLLHLYMDDNLLSSVPSQLPA-SLEHLRLSRNR 145
Query: 61 INNMENDYFLTLTKLSLLNLKNNK-----ISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
I+ + F+ L KL+LL+L+ NK ++EVS + L NL ++L+ N+L+ +P L
Sbjct: 146 ISKIPAGVFIGLDKLTLLDLQGNKLMDDSVTEVS--LKGLNNLVQINLAKNQLSTMPLGL 203
Query: 116 SSLFHLKSLFLGGNPIKTV 134
LFL GN I+ +
Sbjct: 204 PP--STTQLFLDGNNIEKI 220
>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
Length = 595
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++LKTL L+ N L S DSL +++ L L+L +N+L+ +P V LT L L F
Sbjct: 159 LANLKTLALNENSLTSLPDSLQ---NLKQLKVLDLRHNKLSDIPDVIYKLHTLTTLYLRF 215
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + D L+ L++L+L+ NKI E+ + +G L+NL LDLS N L +P + +
Sbjct: 216 NRIR-VVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNC 274
Query: 119 FHLKSLFLGGN 129
+L +L L N
Sbjct: 275 VNLTALDLQHN 285
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
+++ +++L HN++ +F + LT+LN+ N LT LP+ + L G N +
Sbjct: 369 TNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSL 428
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ +D L L +L L NN + + + +G+L L +LDL +N L +P E+ L L
Sbjct: 429 TKLPDDIH-CLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDL 487
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + + I
Sbjct: 488 QKLILQSNQLSALPRTI 504
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 27 RSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
++ L+LS + +T++P DC +L L NKI+++ + L L L L N +
Sbjct: 114 ENIQRLDLSKSSITVIPASVKDCTSLVEFYLYGNKISSLPPEIG-CLANLKTLALNENSL 172
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + ++ +L L +LDL N+L+D+P + L L +L+L N I+ V +++
Sbjct: 173 TSLPDSLQNLKQLKVLDLRHNKLSDIPDVIYKLHTLTTLYLRFNRIRVVGDNL 225
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 28/151 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKIN 62
L L++ N L S LPL I + + ELN N LT LP C +NL L+L N +
Sbjct: 395 LTKLNMKENALTS--LPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLK 452
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVG-----------------------DLINLA 99
+ N L KL +L+L+ N++ + S +G L NL
Sbjct: 453 RIPNTIG-NLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLSALPRTIGHLTNLT 511
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L + +N L +P E+ +L +L+SL++ NP
Sbjct: 512 YLSVGENNLQFLPEEIGTLENLESLYINDNP 542
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
+H+ ++ N + L + +LT + LS N P + N+T + L N+
Sbjct: 321 THMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQ 380
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ ++ F L+ LN+K N ++ + ++G + L+ N LT +P ++ L +
Sbjct: 381 IDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQN 440
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+ L L N +K + N I K + ++ +RL+
Sbjct: 441 LEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLE 475
>gi|122921460|pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL ++ NKL + + +F + +L EL L NQL LP V LT+L LG+N
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ F LT L L L NN++ V D L L L L +N+L VP S
Sbjct: 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDS 203
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L LK L L NP N I+ +K + + GG + E T +
Sbjct: 204 LEKLKMLQLQENPWDCTCNGIIYMAKWLKKKADEGLGGVDTAGCEKGGKAVLEITEK 260
>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
Length = 682
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGF 58
L L+ LD+S +L L + + + L LN+S NQL +P D + LT L +GF
Sbjct: 192 LIELEELDISGMELTEFPLEI-VGLTKLRSLNVSQNQLKTIP--QDIEKLTELEELDIGF 248
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N +N D LTKLS L++ ++++ ++S + +L L L S NEL + P ++S L
Sbjct: 249 NDYSNGSLDAISKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKL 308
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L L N I T+ N+I
Sbjct: 309 DSLKELMLDDNQITTIPNEI 328
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 2 LSHLKTLDLSHNKLVSD--SLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLG 57
L HL TL L+ VSD ++PL I + +L L+L+ N+L P KNLT L L
Sbjct: 100 LIHLDTLYLA----VSDFKTIPLEIAKLTNLKYLHLASNKLEHFPPQLLTLKNLTSLSLR 155
Query: 58 FNKINNMENDYF----LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
NK D F + L L++ N I ++ ++ +LI L LD+S ELT+ P
Sbjct: 156 NNKF-----DVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEFPL 210
Query: 114 ELSSLFHLKSLFLGGNPIKTVRNDI 138
E+ L L+SL + N +KT+ DI
Sbjct: 211 EIVGLTKLRSLNVSQNQLKTIPQDI 235
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ LK L ++HNKL +SLP I + L EL+L YN+LT P V +NL L L +
Sbjct: 423 LNELKVLQINHNKL--ESLPNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKS 480
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L K+ +LNL +N+ + + ++ L L DN+++ +P E+S L
Sbjct: 481 ELKTLPKG-ITKLKKIRMLNLDSNRFEVFPIEILEFQKISYLSLDDNKISSIPNEISKLK 539
Query: 120 HLKSLFLGGNPI 131
+ L L N +
Sbjct: 540 RMYVLSLSRNKL 551
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L LS NK S P+ I ++ +L EL LS N++ LP ++ K L L L N
Sbjct: 354 LQNLERLRLSDNKFTS--FPMQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHN 411
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + + L L +L +L + +NK+ + + + L L LDL N LT P +
Sbjct: 412 KFEELPTE-ILELNELKVLQINHNKLESLPNTISILDKLEELDLGYNRLTSFPLVILKFE 470
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+L L L + +KT+ I + K + ++ ++R +
Sbjct: 471 NLGRLSLEKSELKTLPKGITKLKKIRMLNLDSNRFE 506
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 19/146 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L N++ + +P I +++ LT L L N+++ LP ++ +NL L L N
Sbjct: 308 LDSLKELMLDDNQITT--IPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDN 365
Query: 60 K-------INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
K I N+EN L L L NKI+++ S + +L L L L+ N+ ++P
Sbjct: 366 KFTSFPMQITNLEN--------LKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELP 417
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDI 138
E+ L LK L + N ++++ N I
Sbjct: 418 TEILELNELKVLQINHNKLESLPNTI 443
>gi|320170955|gb|EFW47854.1| hypothetical protein CAOG_05792 [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L L +N + S S F D+ +LTEL+L NQ+T +P T LT+L L N
Sbjct: 186 LTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFTGLTALTYLYLNSN 245
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+I ++ D F LT L+ L+L +N I+ +++ DL L L + N +T + +
Sbjct: 246 QITSIPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSFNSNSITSISANAFAG 305
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L LF N I ++ +
Sbjct: 306 LTALTYLFFSSNLITSISANAFAG 329
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
++ L L LS N++ S F D+ +L L L N +T + T LT+L L N
Sbjct: 115 VTALTYLSLSSNQITSIPAGAFTDLTALRSLFLYANLITSISANAFTSLTALTYLHLYGN 174
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+I ++ N F LT L+ L+L NN I+ +S+N DL L L L N++T +P + +
Sbjct: 175 QITSISNA-FTGLTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFTG 233
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L L L+L N I ++ D
Sbjct: 234 LTALTYLYLNSNQITSIPADTF 255
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L L S N + S S F + +LT L+L NQ+T +P T LT+L L N
Sbjct: 306 LTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQITSIPAGTFTGVTALTYLSLDSN 365
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCEL 115
+I ++ D F LT L+ L L N+I+ + SS+ +L L L L N +T +P L
Sbjct: 366 QITSIPADTFTGLTALTYLYLGTNQITSLPSSSFTNLTALTYLVLQSNPITTLPPGL 422
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFN 59
L+ L L L+ N++ S F + +LT L+L+ N +T + TD LT+L N
Sbjct: 234 LTALTYLYLNSNQITSIPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSFNSN 293
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
I ++ + F LT L+ L +N I+ +S+N L L L L N++T +P +
Sbjct: 294 SITSISANAFAGLTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQITSIPAGTFTG 353
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
+ L L L N I ++ D
Sbjct: 354 VTALTYLSLDSNQITSIPADTF 375
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L L L +N + S F + +LT L+L N +T +P T LT+L L N
Sbjct: 67 LTALTFLSLDYNLITSIPADAFTGLTALTYLSLYANPITSIPAGTFTGVTALTYLSLSSN 126
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
+I ++ F LT L L L N I+ +S+N L L L L N++T + + L
Sbjct: 127 QITSIPAGAFTDLTALRSLFLYANLITSISANAFTSLTALTYLHLYGNQITSISNAFTGL 186
Query: 119 FHLKSLFLGGNPIKTVRNDILQD 141
L L L N I ++ + D
Sbjct: 187 TALTELHLYNNHITSISANAFTD 209
>gi|126570558|gb|ABO21224.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L +N+ + F D+R LT L L L LP V NL L L +N++ ++
Sbjct: 38 LRLDYNQFTTLDASAFRDLRQLTWLGLDGVGLQSLPPGVFDRLINLDKLYLTYNQLKSLP 97
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSLFHLKSL 124
F +LTKL+LLNL N++ + V D L NL L L +N+L VP L+S+
Sbjct: 98 LGVFDSLTKLTLLNLGENQLQSIPKGVFDRLTNLQELRLYNNQLQSVPHGAFDRLKLQSI 157
Query: 125 FLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQES 171
FL GN R +IL S I + + D D G++ +
Sbjct: 158 FLYGNSWDCSRCEILYLSSWIRENQGKVKSDARSNIADPDGVTCSDG 204
>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
Length = 506
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++L+TL L+ N L S LP ++ ++ L L+L +N+L +P V K+L L L FN
Sbjct: 70 LTNLETLALNENSLTS--LPNTLENLKRLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + +D LT L+ L+L+ NKI E+ S +GD +NL D+S N L +P E+
Sbjct: 128 RIKYV-SDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCV 186
Query: 120 HLKSLFLGGN 129
L +L L N
Sbjct: 187 QLSTLDLQHN 196
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 18 DSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
D +P +F + LT+LN+ NQLT LP+ N+ L LG N++ + +D L
Sbjct: 293 DKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQF-LQN 351
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L +L L NN + +S+++ +L L +LDL +N L +P E+ L L+ L L N + ++
Sbjct: 352 LEVLILSNNLLKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSL 411
Query: 135 RNDILQDSKRIISHIKTSRLDY 156
I + + + + L+Y
Sbjct: 412 PRAIGHLTNLTVFSVGENNLNY 433
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + +LT + LS N T P + N+ + + N+I+ + F KL+ LN
Sbjct: 251 LLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLN 310
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+++N+++ + ++G +N+ L+L N+LT +P ++ L +L+ L L N +K + I
Sbjct: 311 MRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIA 370
Query: 140 QDSKRIISHIKTSRLD 155
K + ++ +RL+
Sbjct: 371 NLRKLRVLDLEENRLE 386
>gi|255088281|ref|XP_002506063.1| predicted protein [Micromonas sp. RCC299]
gi|226521334|gb|ACO67321.1| predicted protein [Micromonas sp. RCC299]
Length = 250
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDL++N+L S +P I + SL EL L NQLT LP +L L L N
Sbjct: 49 LTSLERLDLNNNQLTS--VPEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQN 106
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L +N ++ + + +G L +L L LS N+LT VP E+ L
Sbjct: 107 QLTRLPAKIG-QLRSLKELSLYHNGLTRLPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLT 165
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LGGN + +V +I Q
Sbjct: 166 SLQELSLGGNLLTSVPAEIGQ 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L L N+L LP I +RSL EL+L +N LT LP +L L L N
Sbjct: 95 LTSLRKLFLDQNQLTR--LPAKIGQLRSLKELSLYHNGLTRLPAKIGKLTSLKTLHLSRN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L+L N ++ V + +G L +L +L L DN+LT VP E+ L
Sbjct: 153 QLTSVPAE-IRQLTSLQELSLGGNLLTSVPAEIGQLTSLRVLYLFDNKLTSVPAEIEQLT 211
Query: 120 HLKSLFLGGNPIKTVRNDI 138
LK L+L N + ++ I
Sbjct: 212 SLKELWLFNNKLTSLPAAI 230
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L+ L+ L L N+L LP I + SL +L L NQLT LP ++L L L
Sbjct: 71 LLTSLRELVLYGNQLTR--LPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYH 128
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + LT L L+L N+++ V + + L +L L L N LT VP E+ L
Sbjct: 129 NGLTRLPAKIG-KLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNLLTSVPAEIGQL 187
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
L+ L+L N + +V +I Q
Sbjct: 188 TSLRVLYLFDNKLTSVPAEIEQ 209
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L+ L LNL+ N+++ V + + L +L LDL++N+LT VP E+ L L+ L L GN +
Sbjct: 26 LSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSLRELVLYGNQL 85
Query: 132 KTVRNDILQ 140
+ I Q
Sbjct: 86 TRLPAKIWQ 94
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L HN L LP I + SL L+LS NQLT +P +L L LG N
Sbjct: 118 LRSLKELSLYHNGLTR--LPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ ++ + LT L +L L +NK++ V + + L +L L L +N+LT +P + L
Sbjct: 176 LLTSVPAEIG-QLTSLRVLYLFDNKLTSVPAEIEQLTSLKELWLFNNKLTSLPAAIREL 233
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+ +L +LNL NQLT +P LT L L+L NN++
Sbjct: 26 LSALRKLNLRGNQLTSVPA-----------------------EIWQLTSLERLDLNNNQL 62
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ V +G L +L L L N+LT +P ++ L L+ LFL N + + I Q
Sbjct: 63 TSVPEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQ 117
>gi|418739213|ref|ZP_13295601.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410753465|gb|EKR10430.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 281
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+L + LP I+ ++ L L+LS NQL LP + L +L L N++
Sbjct: 39 VRTLDLSKNQLTT--LPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLT 96
Query: 63 NM--ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ E +Y L L L+L+NN+++ + + L L +LDL+DN+LT +P E+ L
Sbjct: 97 TLPKEIEY---LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKK 153
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L N + T+ +I
Sbjct: 154 LQELYLINNQLTTLPKEI 171
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++LDL +N+L + LP I+ ++ L L+L+ NQLT +P K L L L N
Sbjct: 105 LKDLESLDLRNNQLTT--LPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L +L LL+L+ N+++ + +G L L +LDL N+LT +P E+ L
Sbjct: 163 QLTTLPKEIG-YLEELWLLDLRKNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQ 221
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N T +I
Sbjct: 222 KLEKLYLKNNQFTTFPKEI 240
>gi|418686305|ref|ZP_13247474.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410739259|gb|EKQ83988.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++TLDLS N+L + LP I+ ++ L L+LS NQL LP + L +L L N++
Sbjct: 39 VRTLDLSKNQLTT--LPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLT 96
Query: 63 NM--ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ E +Y L L L+L+NN+++ + + L L +LDL+DN+LT +P E+ L
Sbjct: 97 TLPKEIEY---LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKK 153
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L+L N + T+ +I
Sbjct: 154 LQELYLINNQLTTLPKEI 171
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L L HN+L + LP I+ ++ L L+L NQLT LP + K L L L N
Sbjct: 82 LQKLRYLYLDHNQLTT--LPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDN 139
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L L +LDL N+LT +P E+ L
Sbjct: 140 QLTTIPKEIG-YLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQ 198
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N T +I
Sbjct: 199 KLEKLYLKNNQFTTFPKEI 217
>gi|392594157|gb|EIW83482.1| hypothetical protein CONPUDRAFT_152507 [Coniophora puteana RWD-64-598
SS2]
Length = 2378
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNKIN 62
LK L L N+L ++LP + +R L LNLS+N + +P + L L L N++
Sbjct: 1469 LKKLYLGENRLTENALPALVGLRELRVLNLSFNDIQDMPASFLRNMMQLEELYLSGNELT 1528
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT------DVPCELS 116
+ + LT+LS+L L N+ + +G + NL ++D N+L D +
Sbjct: 1529 GIPTEDLARLTRLSVLYLNGNRFQTLPQELGKVQNLTVMDAGSNQLRYNINNWDFDWNWN 1588
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
LK L L GN ++ D ++ + S ++ +
Sbjct: 1589 FNKTLKYLNLSGNKRLEIKPDTSSSARPVRSEVEAQQ 1625
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 24/156 (15%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-----------VCTDCKNL 51
S + L++S N +V L +L EL L++ L +P + +C +
Sbjct: 1005 SSIVILNMSRNPMVDIPLDFIQSCTTLRELRLTHMALKKVPQSIRYSASLQRINLNCNRI 1064
Query: 52 THL-LLGFNKIN-----NMEND-------YFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
L G ++I N++N+ YF L L L++ NNK + + D+ L
Sbjct: 1065 ADLDEAGLDRIPELAQVNLQNNRIEQLPWYFPRLRALKYLDISNNKFARFPQVLCDMPWL 1124
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
LD+S N LT++P EL SL L+ L + GN ++ +
Sbjct: 1125 VDLDVSFNMLTELPDELGSLAGLQRLVIVGNQVQRI 1160
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNEL 108
+L L LG N++ + L +L +LNL N I ++ +S + +++ L L LS NEL
Sbjct: 1468 SLKKLYLGENRLTENALPALVGLRELRVLNLSFNDIQDMPASFLRNMMQLEELYLSGNEL 1527
Query: 109 TDVPCE-LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
T +P E L+ L L L+L GN +T+ ++ + + +++L Y+ N D
Sbjct: 1528 TGIPTEDLARLTRLSVLYLNGNRFQTLPQELGKVQNLTVMDAGSNQLRYNINNWD 1582
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 26/120 (21%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L+ LDLSH KL S +RSL L+LS+N +LP
Sbjct: 1250 LEELDLSHAKLSSLDDFALAQLRSLRRLDLSHNSFRVLP--------------------- 1288
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
D L +L+ L + +N++ + + +G L L LD+ +N L ++P ++L++ KSL
Sbjct: 1289 --DALGELERLTELVVADNQLDALPATIGQLQRLRKLDVHNNSLKELP---AALWNCKSL 1343
>gi|390353917|ref|XP_790260.3| PREDICTED: uncharacterized protein LOC585336 [Strongylocentrotus
purpuratus]
Length = 2649
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 37/221 (16%)
Query: 5 LKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKI 61
L+TL+L HNK+ + +P +FI + +T ++ S+NQL+ +P + K+L L L FN I
Sbjct: 1472 LRTLNLRHNKIRNSGIPNDIFI-LEDMTVVDFSHNQLSAIPEDMEKAKSLLVLNLSFNNI 1530
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN--------------- 106
+ + F+ LT L +N +NK+ + + L N+ L ++N
Sbjct: 1531 KEIPSQLFMNLTDLIYINFSDNKLEILPPQMRRLTNIQTLIFNNNPLLHSQLRQLTSMTQ 1590
Query: 107 -----------ELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
LT++P +L +L +L + L N +++V D+ +S +K L
Sbjct: 1591 LQTLHLRNTQRNLTNIPPQLDALVNLADVDLSYNDLESV-----PDAFYSLSSLKRLNLS 1645
Query: 156 YHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVINI 196
+C + S +N+ + KL TLCK+I++
Sbjct: 1646 NNCI-TQLSAIDSWTRLETLNVARNKLTSLPP-TLCKLISL 1684
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQ--LTMLPVCTDC-KNLTHLLLGF 58
L++++TL ++N L+ L M L L+L Q LT +P D NL + L +
Sbjct: 1564 LTNIQTLIFNNNPLLHSQLRQLTSMTQLQTLHLRNTQRNLTNIPPQLDALVNLADVDLSY 1623
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ D F +L+ L LNL NN I+++S+ + L L+++ N+LT +P L L
Sbjct: 1624 NDLESVP-DAFYSLSSLKRLNLSNNCITQLSA-IDSWTRLETLNVARNKLTSLPPTLCKL 1681
Query: 119 FHLKSLFLGGNPI 131
LK L + GN I
Sbjct: 1682 ISLKRLIISGNQI 1694
>gi|225434504|ref|XP_002275653.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
At2g30105 [Vitis vinifera]
gi|297745853|emb|CBI15909.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL--FIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGF 58
LS ++ L LS N ++ +S+ + ++SLT L+LS N LTMLP +L L +
Sbjct: 182 LSSMQKLLLSANDILDESISWEGVVSLKSLTVLSLSQNYLTMLPSALGALTSLRQLHIAS 241
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ ++ L +T+L +L NN+IS + + +GD +L ++ S N L+++P S+L
Sbjct: 242 NKLTSLPIQIGL-MTQLEVLKANNNRISTIPTQIGDCNSLIEVEFSSNLLSELPETFSNL 300
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+LK+L L N +K++ ++ +
Sbjct: 301 QNLKALHLSNNGLKSLPRNLFK 322
>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
(Silurana) tropicalis]
Length = 582
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLVKLALSENSLTS--LPDSLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D TL+KL++L+++ NKI + + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITAVEKD-IKTLSKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L + +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 30 TELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
T L+L+ + MLPV D +T L L NK+ ++ + L L L L N ++ +
Sbjct: 103 TRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVG-CLVNLVKLALSENSLTSL 161
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISH 148
++ +L L +LDL N+L ++P + L L +LFL N I V DI SK +
Sbjct: 162 PDSLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLS 221
Query: 149 IKTSRLDY 156
I+ +++ +
Sbjct: 222 IRENKIKH 229
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + + L L+ N PV + + L + N+
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNR 366
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 426
Query: 121 LKSLFLGGNPIKTVRNDI 138
++ L L N +K + + I
Sbjct: 427 IEVLILSNNLLKKLPHGI 444
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ + L L NKL SLP + + +L +L LS N LT LP D K L L L N
Sbjct: 122 LTQITELYLYGNKL--QSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHN 179
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L+ L+ L L+ N+I+ V ++ L L +L + +N++ +P E+ L
Sbjct: 180 KLREIPAVVY-RLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGELC 238
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 239 NLITLDVAHNQLEHLPKEI 257
>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
Length = 582
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
+L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN+I
Sbjct: 147 NLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRI 204
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E D L KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ + +
Sbjct: 205 TAVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQI 263
Query: 122 KSLFLGGN 129
+L L N
Sbjct: 264 TNLDLQHN 271
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
>gi|119926376|dbj|BAF43227.1| variable lymphocyte receptor [Lethenteron camtschaticum]
Length = 217
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINN 63
+ L L+ N++ +F + +LT L+L NQLT LPV NL L L NK+
Sbjct: 42 RVLYLNDNQITKLEPGVFDSLAALTYLHLGANQLTALPVGVFDRLGNLEVLGLCCNKLTE 101
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHL 121
+ + F LT+L L L N+++ V + V D L++L LDL +N+L +P +L L
Sbjct: 102 LPSGVFDKLTRLKQLGLDQNQLTSVPAGVFDSLVSLRTLDLQNNQLKSIPRGAFDNLKSL 161
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSR 153
+FL NP +DIL S+ I ++ R
Sbjct: 162 THIFLYNNPWNCACSDILYLSRWISRNLAAVR 193
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 32 LNLSYNQLTML-PVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
L L+ NQ+T L P D LT+L LG N++ + F L L +L L NK++E+
Sbjct: 44 LYLNDNQITKLEPGVFDSLAALTYLHLGANQLTALPVGVFDRLGNLEVLGLCCNKLTELP 103
Query: 90 SNVGD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
S V D L L L L N+LT VP + SL L++L L N +K++ D+ + ++
Sbjct: 104 SGVFDKLTRLKQLGLDQNQLTSVPAGVFDSLVSLRTLDLQNNQLKSIPRGAF-DNLKSLT 162
Query: 148 HIKTSRLDYHCQNVD 162
HI ++C D
Sbjct: 163 HIFLYNNPWNCACSD 177
>gi|449268113|gb|EMC78983.1| Leucine-rich repeat-containing protein 39 [Columba livia]
Length = 335
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
L+ L+L+ N+ +SD P D++ L+ ++L NQ T +P + NL L +G NK+
Sbjct: 154 LERLELAVNRNISDLPPQLSDLKKLSHIDLCMNQFTTIPSALLNMPNLEWLDMGGNKLQE 213
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ D + L L L+ N+I + +G++ NL+ L LS+N+L D+P + + +L+
Sbjct: 214 LP-DAIDRMENLHTLWLQRNEIKSLPETIGNMKNLSTLVLSNNKLKDIPASMKDMTNLRF 272
Query: 124 LFLGGNPIK 132
+ NP++
Sbjct: 273 VNFRDNPLE 281
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+L LDLS N + + +P I + SL EL LSYN++ +P +C +L L L N
Sbjct: 105 FQNLVVLDLSRNSI--ERVPKEIGQLTSLQELLLSYNRIKSVPEEIRNCVSLERLELAVN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L KLS ++L N+ + + S + ++ NL LD+ N+L ++P + +
Sbjct: 163 RNISDLPPQLSDLKKLSHIDLCMNQFTTIPSALLNMPNLEWLDMGGNKLQELPDAIDRME 222
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L+L N IK++ I
Sbjct: 223 NLHTLWLQRNEIKSLPETI 241
>gi|147776552|emb|CAN65127.1| hypothetical protein VITISV_005830 [Vitis vinifera]
Length = 380
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL--FIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGF 58
LS ++ L LS N ++ +S+ + ++SLT L+LS N LTMLP +L L +
Sbjct: 182 LSSMQKLLLSANDILDESISWEGVVSLKSLTVLSLSQNYLTMLPSALGALTSLRQLHIAS 241
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ ++ L +T+L +L NN+IS + + +GD +L ++ S N L+++P S+L
Sbjct: 242 NKLTSLPIQIGL-MTQLEVLKANNNRISTIPTQIGDCNSLIEVEFSSNLLSELPETFSNL 300
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+LK+L L N +K++ ++ +
Sbjct: 301 QNLKALHLSNNGLKSLPRNLFK 322
>gi|301784176|ref|XP_002927503.1| PREDICTED: keratocan-like [Ailuropoda melanoleuca]
Length = 352
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 167 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 225
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS--SNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ S+ D+ ++ L LS N+LT VP +S+
Sbjct: 226 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVP-RISA 284
Query: 118 LFHLKSLFLGGNPIKTVRNDIL--------QDSKRIISHIKTSRLD 155
HL+ L L N IK V ++ QDS H++ RLD
Sbjct: 285 --HLQHLHLDHNKIKNVNVSVICPPTLPAEQDSFGYGPHLRYLRLD 328
>gi|284010735|dbj|BAI66847.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 237
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L L++NKL S F M+ LT L L N+L LP V NL L LG N++ +
Sbjct: 43 KKLVLNYNKLSKLSPTAFHGMKELTYLGLEGNRLQTLPTGVFDHLVNLNELRLGTNQLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHL 121
+ F LTKL++L L NNK+ + V D L L L L N+L VP E +L ++
Sbjct: 103 LPPGVFDHLTKLTILGLDNNKLQSLPHGVFDKLTELKTLSLDRNQLRKVPKEAFDNLQNI 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI 145
K L L NP DIL SK I
Sbjct: 163 KDLRLNDNPWDCSCRDILYLSKWI 186
>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
Length = 419
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L +LNL NQLT +P +LT L LG N++ ++ + LT L+ LNL +N+
Sbjct: 27 LSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIG-QLTSLTELNLFDNQ 85
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ V + +G L +L LDL N LT VP EL L L+ L L N + ++ +I Q
Sbjct: 86 LTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQ 141
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ + L N+L S LP I + SL +L L NQLT +P +L L L N
Sbjct: 165 LTSLREVHLYGNQLTS--LPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDN 222
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + LT L L+L N+++ V + +G L +L L+L+ N+LT +P E+ L
Sbjct: 223 QLTNLPAEIG-QLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLT 281
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L L GN + ++ +I Q
Sbjct: 282 SLKELELNGNQLTSLPAEIGQ 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDL N+L + LP I + SL +L+LS NQLT +P +LT L L N
Sbjct: 211 LTSLEELDLKDNQLTN--LPAEIGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGN 268
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L N+++ + + +G L +L +L L DN LT VP E+ L
Sbjct: 269 QLTSLPAEIG-QLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLT 327
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN + +V +I
Sbjct: 328 SLTELELHGNQLTSVPAEI 346
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N+L S +P I + SL +L+L YN LT +P +L L+L N
Sbjct: 73 LTSLTELNLFDNQLTS--VPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNN 130
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + LT L L L + +++ + + +G L +L + L N+LT +P E+ L
Sbjct: 131 QLTSLPAEIG-QLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLT 189
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+L GN + +V ++ Q
Sbjct: 190 SLEKLYLYGNQLTSVPAELWQ 210
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L LS N+L S +P I + SLTEL L+ NQLT LP +L L L N
Sbjct: 234 LTSLWQLHLSGNQLTS--VPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGN 291
Query: 60 KINNMEN--------------DYFLT--------LTKLSLLNLKNNKISEVSSNVGDLIN 97
++ ++ D LT LT L+ L L N+++ V + +G L +
Sbjct: 292 QLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTS 351
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L DN+LT +P E+ L L+ L L N + +V I
Sbjct: 352 LRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAI 392
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L LDL +N L S L+ + SL L L NQLT LP +L L L +
Sbjct: 96 LTSLVQLDLEYNHLTSVPAELW-QLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQ 154
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT L ++L N+++ + + +G L +L L L N+LT VP EL L
Sbjct: 155 LTSLPAEIG-QLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTS 213
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L N + + +I Q + H+ ++L
Sbjct: 214 LEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQL 247
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV---------------- 44
L+ L L+L+ N+L S LP I + SL EL L+ NQLT LP
Sbjct: 257 LASLTELELNGNQLTS--LPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDN 314
Query: 45 --------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+LT L L N++ ++ + L LT L L K+N+++ + + +G L
Sbjct: 315 LLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGL-LTSLRGLGFKDNQLTSLPAEIGQLT 373
Query: 97 NLAILDLSDNELTDVPCELSSL 118
+L L L N LT VP + L
Sbjct: 374 SLRGLGLECNLLTSVPAAIREL 395
>gi|66504135|ref|XP_394301.2| PREDICTED: leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein
2-like [Apis mellifera]
Length = 915
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ + LS N+L LF +SLT L+LS N L LP T KNL L L N
Sbjct: 172 LNRLEEIGLSRNRLSILPYQLFASAKSLTRLDLSDNLLVSLPDHSFTLNKNLQELSLAGN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVP-CELSS 117
++ + + F L +L +L L +N+I + DL +L LDLS+N +T + S
Sbjct: 232 RLTKLPSHLFSGLNQLKILELDDNEIDTIPRGFFADLASLQYLDLSENPITRLSNIAFQS 291
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN- 176
L +L+ L L P+ + D+ + +++ + + + +N D G+ E T EIN
Sbjct: 292 LSNLRWLSLKNLPVTVLPQDVWRPLRKLRTLLLSGTKLEVLRNEDLKGLEKLE-TLEINN 350
Query: 177 -----IDKYKLDRTKTL 188
I + LDRT L
Sbjct: 351 SPLREISRSTLDRTPAL 367
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L+L+ N+L LF ++ L E+ LS N+L++LP + K+LT L L N
Sbjct: 148 LHQLQYLNLTGNQLTIIPRALFQNLNRLEEIGLSRNRLSILPYQLFASAKSLTRLDLSDN 207
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN-LAILDLSDNELTDVPCE-LSS 117
+ ++ + F L L+L N+++++ S++ +N L IL+L DNE+ +P +
Sbjct: 208 LLVSLPDHSFTLNKNLQELSLAGNRLTKLPSHLFSGLNQLKILELDDNEIDTIPRGFFAD 267
Query: 118 LFHLKSLFLGGNPIKTVRNDILQ 140
L L+ L L NPI + N Q
Sbjct: 268 LASLQYLDLSENPITRLSNIAFQ 290
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ LDLS N + S F + +L L+L +T+LP V + L LLL
Sbjct: 268 LASLQYLDLSENPITRLSNIAFQSLSNLRWLSLKNLPVTVLPQDVWRPLRKLRTLLLSGT 327
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI-NLAILDLSDNELTDVPCELSSL 118
K+ + N+ L KL L + N+ + E+S + D L +DL D+ LT +P ++ L
Sbjct: 328 KLEVLRNEDLKGLEKLETLEINNSPLREISRSTLDRTPALRKIDLHDSNLTFLPANVAQL 387
Query: 119 FHLKSLFLGGNP 130
L L L GNP
Sbjct: 388 SFLNELQLQGNP 399
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNKIN 62
L+ L+L N+L +F + L LNL+ NQLT++P + L + L N+++
Sbjct: 127 LEHLNLGDNRLTELPSDVFHPLHQLQYLNLTGNQLTIIPRALFQNLNRLEEIGLSRNRLS 186
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL-INLAILDLSDNELTDVPCEL-SSLFH 120
+ F + L+ L+L +N + + + L NL L L+ N LT +P L S L
Sbjct: 187 ILPYQLFASAKSLTRLDLSDNLLVSLPDHSFTLNKNLQELSLAGNRLTKLPSHLFSGLNQ 246
Query: 121 LKSLFLGGNPIKTVRNDILQD 141
LK L L N I T+ D
Sbjct: 247 LKILELDDNEIDTIPRGFFAD 267
>gi|284010527|dbj|BAI66743.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 237
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMEND 67
L++NKL F +++ LT LNL NQL LP V NL L L N++ ++
Sbjct: 47 LNYNKLRELEPTAFHNLKELTYLNLDTNQLQTLPAGVFDHLVNLDKLYLNKNQLKSLPPK 106
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHLKSLF 125
F +LTKL+ LNL NN++ + D L L L L +N+L VP SL ++K+L
Sbjct: 107 IFDSLTKLTWLNLFNNQLKRIPEGAFDKLTELKTLRLDNNQLRSVPNRAFDSLSNIKTLR 166
Query: 126 LGGNPIKTVRNDILQDSKRI 145
L NP NDIL SK I
Sbjct: 167 LQSNPWDCSCNDILYLSKWI 186
>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
kowalevskii]
Length = 1970
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
+ +K++DL H+ +S+ F D+++L +LNLS+N +P + LT L + N +
Sbjct: 32 TRVKSIDL-HDNALSELPDKFADLKTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDL 90
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + + +T L+ L+L NKI E+S + L NL ++ DN +T++P E+ L HL
Sbjct: 91 AEIPTELY-NITALTELSLFKNKIQEISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHL 149
Query: 122 KSLFLGGNPIKTV 134
+ + + N + +
Sbjct: 150 EEIDISKNQVTQI 162
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L++LK D+S NKL +P I ++ +L L LS N + ++P NL+ L + N
Sbjct: 1259 LTNLKVFDISKNKLTE--IPDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNN 1316
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I+ + D LTKL LNL N+I ++S +VG ++ L +LD+S N+L+ +P + +L
Sbjct: 1317 IISCIP-DGIYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSIIPLSIKNLQ 1375
Query: 120 HLKSLFLGGN------PIKTVR 135
L+ L L GN PI +R
Sbjct: 1376 MLEILDLQGNAKLTSLPIGIIR 1397
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 28 SLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEN------DYFLTLTKLSLLNLK 81
SL EL++S N + ++P TD H L N+++ N D +T L LNL
Sbjct: 1192 SLKELDISNNNIQIIP--TDI----HTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLS 1245
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+N+I +S+++ L NL + D+S N+LT++P E+ +L L+ L+L N I+ + + I
Sbjct: 1246 DNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSI 1302
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
L + +LD+S N ++ +P I M SL LNLS N++T +P VC D L+HL L
Sbjct: 505 FLPQIHSLDISDNAVID--IPSDIGQMTSLQNLNLSGNRITEIPSTVC-DLYQLSHLNLK 561
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
NKI + + L L ++ +N I E+ S VG+L L +S+NEL +P +
Sbjct: 562 KNKIPKLPLNIG-RLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAMHK 620
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L +L L + GNPI D+
Sbjct: 621 LVNLNDLQIHGNPITEPTEDV 641
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L L LDLS N++ ++P I ++ LT+ + NQL+ LP C D + L L + N
Sbjct: 942 LKTLNELDLSGNQI--RTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGN 999
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I M + L +L+ L L +N+++ ++ N+G L L L +N+LT +P E+ +
Sbjct: 1000 QIT-MVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTSIPREIKRIT 1058
Query: 120 HLKSLFLGGNPIK 132
L+++ L GN I+
Sbjct: 1059 TLRTISLRGNEIE 1071
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+++K L++S+N L+S LP+ ++ L ELNLS N +PV CK + N
Sbjct: 306 TNVKALNISNNSLMS--LPMELAKLQQLEELNLSDNHFQQIPVHV-CK--IQNIQKLNMR 360
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
NNM + + L L+L N IS + + LA LD+SDN+LT VP +S L L
Sbjct: 361 NNMLTQFPNDIDNLKQLDLSGNSISVIPDSCQ--YPLAKLDISDNKLTKVPKSISQLHEL 418
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+ L N I V I + ++ +I I ++L+
Sbjct: 419 EEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLE 452
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+LS L+ LD+SHN+ +++ F +++L EL+LS NQ+ +P
Sbjct: 918 ILSELEMLDISHNQ-ITEIPDTFGKLKTLNELDLSGNQIRTIPSSIS------------- 963
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L +L+ ++ N++SE+ +GDL L LD+S N++T VP + L
Sbjct: 964 ----------QLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKE 1013
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L LG N + ++ +I
Sbjct: 1014 LTKLELGDNQLTSMTPNI 1031
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 30/165 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTE-----------------------LNLSYN 37
LS L+ LD+S NK+ D +P + ++ SLT L+LS N
Sbjct: 804 LSSLEDLDISDNKI--DEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKN 861
Query: 38 QLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
L+ LP C + + L L + N++ + D L L LL N I+E+S+N L
Sbjct: 862 HLSCLPDDFC-NLRQLRQLYIQENELECLPADMH-KLDGLQLLQASQNCITEISNNTCIL 919
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L +LD+S N++T++P L L L L GN I+T+ + I Q
Sbjct: 920 SELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQ 964
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L+ L LDL NKL +S+ + +++L EL+LS N L+++P + L + N
Sbjct: 461 LTSLNKLDLHENKLNEISERIS---QLQNLRELDLSRNNLSVVPSGCFLPQIHSLDISDN 517
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ +D +T L LNL N+I+E+ S V DL L+ L+L N++ +P + L
Sbjct: 518 AVIDIPSDIG-QMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLH 576
Query: 120 HLKSLFLGGNPIKTV 134
+L S + N I +
Sbjct: 577 NLLSFDVSDNTIDEI 591
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ L+ LDLS N + +P+ I + L L+LS N+LT+ P T+ N+ +L L NK
Sbjct: 715 LNKLEELDLSDN--IFQEIPVSIFQLGKLKILHLSNNKLTIFP--TNIGNVKNLDLSANK 770
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I F + LS LN+ NN ++++ ++ L +L LD+SDN++ ++P +S L
Sbjct: 771 ITEFSCP-FPNFSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHS 829
Query: 121 L 121
L
Sbjct: 830 L 830
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L L + N+L LP I D++ L +L++S NQ+TM+P K LT L LG N
Sbjct: 965 LQQLTKFAIRRNQL--SELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDN 1022
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC-ELSSL 118
++ +M + L L KL L+ +NNK++ + + + L + L NE+ D P E +
Sbjct: 1023 QLTSMTPNIGL-LCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENY 1081
Query: 119 FHLKS 123
F L S
Sbjct: 1082 FQLLS 1086
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNKIN 62
L LD+S NKL +P I + L E NLS N + + P + L L + NK+
Sbjct: 395 LAKLDISDNKLTK--VPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLE 452
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D++ LT L+ L+L NK++E+S + L NL LDLS N L+ VP L +
Sbjct: 453 ELPLDFW-NLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVPSG-CFLPQIH 510
Query: 123 SLFLGGNPIKTVRNDILQ 140
SL + N + + +DI Q
Sbjct: 511 SLDISDNAVIDIPSDIGQ 528
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L+LS N +P+ + ++++ +LN+ N LT P D NL L L N
Sbjct: 328 LQQLEELNLSDNHF--QQIPVHVCKIQNIQKLNMRNNMLTQFP--NDIDNLKQLDLSGNS 383
Query: 61 INNMENDYFLTLTKLSL--------------------LNLKNNKISEVSSNVGDLINLAI 100
I+ + + L KL + NL NN I VS +G+L L I
Sbjct: 384 ISVIPDSCQYPLAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLI 443
Query: 101 LDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LD+ +N+L ++P + +L L L L N + + I Q
Sbjct: 444 LDIHNNKLEELPLDFWNLTSLNKLDLHENKLNEISERISQ 483
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
LK LD+S+N + +P I + L L++S N L LP L L L N+I
Sbjct: 1193 LKELDISNNNI--QIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIV 1250
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ D +LT L + ++ NK++E+ +G+L+ L L LS N + +P ++ L +L
Sbjct: 1251 SISTD-IRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTNLS 1309
Query: 123 SLFLGGNPIKTVRNDI 138
L + N I + + I
Sbjct: 1310 ELNISNNIISCIPDGI 1325
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---L 56
L L LD+S N L + D+L + +L +LNLS NQ+ + + TD ++LT+L +
Sbjct: 1213 LYQLNRLDVSSNSLRELPDTL---YKVTTLVQLNLSDNQI--VSISTDIRSLTNLKVFDI 1267
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
NK+ + D L L L L +N I + S++ L NL+ L++S+N ++ +P +
Sbjct: 1268 SKNKLTEIP-DEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIPDGIY 1326
Query: 117 SLFHLKSLFLGGNPIK 132
+L L+ L L N IK
Sbjct: 1327 ALTKLQRLNLMRNQIK 1342
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+ LK LD S N++ + + L + L EL+LS N +PV LG KI
Sbjct: 693 TDLKKLDFSANRIATFPVELS-QLNKLEELDLSDNIFQEIPVSI-------FQLGKLKIL 744
Query: 63 NMENDYFLTLTKLSLLNLKN-----NKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ N+ LT+ ++ N+KN NKI+E S + NL+ L++S+N LT +P +L+
Sbjct: 745 HLSNNK-LTIFPTNIGNVKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTG 803
Query: 118 LFHLKSLFLGGNPIKTV 134
L L+ L + N I +
Sbjct: 804 LSSLEDLDISDNKIDEI 820
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
++ L L L NK+ S P +++L + N+ N +T +P K+L + + N+
Sbjct: 100 ITALTELSLFKNKIQEIS-PGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQ 158
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L+ ++ N +S + +G L L I ++S+N++ D+P + L
Sbjct: 159 VTQIPKSVD-GLVHLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQM 217
Query: 121 LKSLFLGGNPIKTVRNDI 138
L + N + ++ DI
Sbjct: 218 LHRFDIAHNRLTSLPRDI 235
>gi|281353085|gb|EFB28669.1| hypothetical protein PANDA_017290 [Ailuropoda melanoleuca]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS--SNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ S+ D+ ++ L LS N+LT VP +S+
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVP-RISA 282
Query: 118 LFHLKSLFLGGNPIKTVRNDIL--------QDSKRIISHIKTSRLD 155
HL+ L L N IK V ++ QDS H++ RLD
Sbjct: 283 --HLQHLHLDHNKIKNVNVSVICPPTLPAEQDSFGYGPHLRYLRLD 326
>gi|260792997|ref|XP_002591500.1| hypothetical protein BRAFLDRAFT_139098 [Branchiostoma floridae]
gi|229276706|gb|EEN47511.1| hypothetical protein BRAFLDRAFT_139098 [Branchiostoma floridae]
Length = 184
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ L +SHNK+ F ++ L E++LS+NQ+T L T L +LLL NKI
Sbjct: 45 LRRLRRLIMSHNKITRIEPGAFAELPQLWEIDLSFNQITTLQAGTFADPLQNLLLNSNKI 104
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPC-ELSSLF 119
+ + F L L L+L +N+I+ + +S DL L +L+L N++T + + L
Sbjct: 105 SKINPGLFAALPLLETLDLSSNQITMIQTSTFADLPQLYLLNLISNQITMIRTGTFADLP 164
Query: 120 HLKSLFLGGNPIKTVR 135
L++L+L N I ++
Sbjct: 165 SLQTLYLKSNQITEIQ 180
>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 950
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+TLDL+HN L+ P + LT L L N LT+LP L L L N
Sbjct: 302 LTALQTLDLAHN-LLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGLSQLAELELQDNA 360
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + + KL+ L+++NN+++ + ++G L+ L +LD N ++D+P EL ++
Sbjct: 361 LEELPAE-LGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVSS 419
Query: 121 LKSLFLGGNPIKTVRND 137
L L L GN I + D
Sbjct: 420 LARLSLSGNRISDLPED 436
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 15/132 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L+HL L LS N+L + P+ D+ L EL ++ N LT LP T+ LT L +I
Sbjct: 463 LTHLTVLSLSGNRLTTLP-PVVFDLTWLKELYVAANGLTELP--TEVGRLTTL-----EI 514
Query: 62 NNMENDYFLTL-------TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ +++ L +L+ L +N+++ V +++G+L++L +DLS NELT +P E
Sbjct: 515 LDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPPE 574
Query: 115 LSSLFHLKSLFL 126
L+ L L+ L L
Sbjct: 575 LARLTALRHLKL 586
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
LS L L+L N L + LP + M L L++ NQLT LP L L G N
Sbjct: 348 LSQLAELELQDNAL--EELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMN 405
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I+++ + + ++ L+ L+L N+IS++ + L L L L N+L+ +P L+ L
Sbjct: 406 LISDLPPELY-AVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLT 464
Query: 120 HLKSLFLGGNPIKTV 134
HL L L GN + T+
Sbjct: 465 HLTVLSLSGNRLTTL 479
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 23/156 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +L L++ +N LV+ +F M L EL+ NQL LP ++L L+ N+
Sbjct: 93 LRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQ 152
Query: 61 INNMENDYFLT----------------------LTKLSLLNLKNNKISEVSSNVGDLINL 98
+ + + L L+ L LN+ +N++ + +GDL +L
Sbjct: 153 LQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDL 212
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
LDL N L +P EL L L SL L N + ++
Sbjct: 213 ERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASL 248
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ LD N L+SD P + SL L+LS N+++ LP C L LLLG+N
Sbjct: 394 LVKLRLLDAGMN-LISDLPPELYAVSSLARLSLSGNRISDLPEDFCRL-TRLERLLLGYN 451
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + LT L++L+L N+++ + V DL L L ++ N LT++P E+ L
Sbjct: 452 QLSTLPAG-LNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLT 510
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + + ++
Sbjct: 511 TLEILDLTSNHLTALPEEL 529
Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 27/153 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L L+ ++N+ D LP I + L L L N LTMLPV +NLT L +G N
Sbjct: 47 LKSLTFLNANYNRF--DRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGNN 104
Query: 60 KINNMENDYFLTLTKLSLL------------------NLKN-----NKISEVSSNVGDLI 96
+ + F + L L +LK N++ + +G
Sbjct: 105 ALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCA 164
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+L LD++ N LT +P L+ L L+ L + N
Sbjct: 165 DLVELDVATNHLTALPAMLAHLSSLRRLNVSSN 197
>gi|410965238|ref|XP_003989157.1| PREDICTED: keratocan [Felis catus]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS--SNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ S+ D+ ++ L LS N+LT VP +S+
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVP-RISA 282
Query: 118 LFHLKSLFLGGNPIKTVRNDIL--------QDSKRIISHIKTSRLD 155
HL+ L L N IK V ++ QDS H++ RLD
Sbjct: 283 --HLQHLHLDHNKIKNVNVSVICPTILPGEQDSFGYGPHLRYLRLD 326
>gi|421119314|ref|ZP_15579638.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347944|gb|EKO98795.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 289
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL + LP I+ +++L L+L YNQ +P KNL L L +N+
Sbjct: 76 VRILILSEQKLTT--LPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFK 133
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L L +LNL +N+++ + +G L NL +L+LS N+LT +P E+ L +L+
Sbjct: 134 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQ 192
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L LG N +KT+ I Q + +++T L+Y+
Sbjct: 193 VLNLGSNRLKTLPKGIEQ-----LKNLQTLYLNYN 222
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I +++L LNLS NQLT LP +NL L L N
Sbjct: 119 LKNLQMLDLCYNQF--KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 176
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ + + L NL L L+ N+LT +P E+ L
Sbjct: 177 QLTTLPKEIG-KLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ 235
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N I T+ ++I+Q
Sbjct: 236 SLTELHLQHNQIATLPDEIIQ 256
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L L+L YNQ +P KNL L L N
Sbjct: 96 LKNLQMLDLCYNQF--KTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSN 153
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N+++ + +G L NL +L+L N L +P + L
Sbjct: 154 QLTTLPKEIG-KLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLK 212
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L+L N + T+ +I
Sbjct: 213 NLQTLYLNYNQLTTLPREI 231
>gi|253401366|gb|ACT31446.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R + L S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCETLYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 9809]
gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 9809]
Length = 865
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
+ LDLS NK +++ P + SL LNL NQ++ +P +L HL L N+I+ +
Sbjct: 19 EKLDLS-NKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEI 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ LT L +LNL NN+I E+ + L +L L L++N++ ++P L+ L L+ L
Sbjct: 78 P-EALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYL 136
Query: 125 FLGGNPIKTVRNDILQ 140
+L N I + + Q
Sbjct: 137 YLNNNQISEIPKALAQ 152
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 2 LSHLKTLD--LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L+HL +L +N + + + SL L L+ NQ++ +P +L HL L
Sbjct: 104 LAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYN 163
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + + LT L L+L NN+I E+ + L +L L L +N++ ++P L+ L
Sbjct: 164 NQIREIP-EALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHL 222
Query: 119 FHLKSLFLGGNPIKTVRNDIL--QDSKRIISHIK 150
+LK L LG NPI V +I+ + + I S++K
Sbjct: 223 VNLKGLVLGNNPITNVPPEIICYDNPQAIFSYLK 256
>gi|340939373|gb|EGS19995.1| putative leucine-rich protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1152
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQL--TMLPVCTDCKNLTHLLLG 57
+ + L+TLDL N LVS LP+ + S LT LNLS N+L L V +L L LG
Sbjct: 544 IFAGLETLDLHGNILVS--LPMGLRRLSFLTSLNLSLNRLGNNCLEVICQIPSLKDLKLG 601
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N + + F L L L+L N++S + SN G+L L IL+LS+N ++P ++ S
Sbjct: 602 GNLLYGPLDPCFSKLENLENLDLHGNQLSALPSNFGNLSRLRILNLSENSFEELPFDILS 661
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKT 151
L L N + ++QDS + ++T
Sbjct: 662 HLPLTELVARKNQL---HGTLIQDSVDALQSLQT 692
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 1 MLSHLKTLDLS------HNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN---- 50
+LSHL +L H L+ DS+ ++SL +++S NQLT +C+ K
Sbjct: 659 ILSHLPLTELVARKNQLHGTLIQDSVDA---LQSLQTIDVSSNQLTH--ICSPGKTVAMP 713
Query: 51 -LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
L + N++ + + + T L L N I+ + L L +D S N++
Sbjct: 714 ALHQFCVSMNRLQALPD--ISSWTNLITLAADENSINAIPEGFTKLEKLRTVDFSSNDIR 771
Query: 110 DVPCELSSLFHLKSLFLGGNPIK 132
VP E+ + +L +L L GNP++
Sbjct: 772 IVPAEIGRMENLANLRLSGNPLR 794
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query: 5 LKTLDLSHNKLVSDSL-----PLFIDMRSLTELNLSYNQLTML-PVCTD--CKNLTHLLL 56
L L LSHN+LV +S PL D+ +L+ELNL++N +T L P+ T+ L+ L +
Sbjct: 976 LTALSLSHNQLVGESYLTTDTPL--DLPALSELNLAHNHITSLQPLLTNLHAPTLSKLDV 1033
Query: 57 GFNKINNMENDYFL--TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
FN+I+ + L L++L + NN + ++ + + L ++D ++N++ +
Sbjct: 1034 SFNRISALPPGTSLRDAFPNLTVLLISNNHLVDLEPDA--IKGLRVVDAANNDIAHLNPR 1091
Query: 115 LSSL----FHLKSLFLGGNPIKTVRNDILQ 140
+ L +L+ L + GN + R +L+
Sbjct: 1092 IGLLGRPAGNLERLEVSGNRFRVPRWSVLE 1121
>gi|156548260|ref|XP_001599951.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Nasonia
vitripennis]
Length = 318
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEN-DYFLTLTKLSLLNLKNNK 84
+++L EL L NQ+T++ KNL L L FN+I +EN D ++L KL + +N+
Sbjct: 78 LQTLVELELRDNQITVIENLDALKNLQSLDLSFNRIKKIENLDNLVSLQKLF---ISSNR 134
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
I+++ NV L NL +L+L DN++ ++ L L +L SLFLG N I +RN
Sbjct: 135 ITKI-ENVAHLKNLTMLELGDNKIREIE-NLDGLDNLTSLFLGKNKISKIRN 184
>gi|253401383|gb|ACT31451.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNINQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
Length = 937
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L L++S+N+L ++ P ++ SL ELN SYNQLT LP + NL L L NK
Sbjct: 179 LKQLSKLNISYNQL-TNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNK 237
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + L L+ LNL N + + S +G+L L L LS N L ++P E+ L
Sbjct: 238 IEKLPRE-IGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHNYLDNIPSEIEKLRK 296
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L +L+LG N +K + I+Q
Sbjct: 297 LTTLYLGYNKLKILPTGIIQ 316
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L L L+ NKL LP F ++ LTEL L+ NQL LP NL L L N
Sbjct: 87 LSTLHRLSLTENKL--SHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNN 144
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ + + F L KLS L+LK+NK+ ++ + DL L+ L++S N+LT++P ++S +
Sbjct: 145 QLTLLPEE-FGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEV 202
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 26/128 (20%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+HLK LDL +NKL +LP I ++SL L L+ N L LP + NL+
Sbjct: 42 NHLKFLDLRNNKL--KTLPPEIGKLQSLNALFLTTNYLEELP--PEIGNLS--------- 88
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
TL +LSL NK+S + G+LI L L L++N+L +P E L +L
Sbjct: 89 ---------TLHRLSL---TENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINL 136
Query: 122 KSLFLGGN 129
+ L L N
Sbjct: 137 ERLSLSNN 144
>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
Length = 581
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 144 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL +L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 202 RITTVEKD-IKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCI 260
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 261 QITNLDLQHN 270
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 354 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 413
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 414 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 472
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 473 QKLVLTNNQLTTLPRGI 489
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 380 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 437
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 438 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 496
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 497 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 556
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 557 PQIVAGGPS 565
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + +LP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 104 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPD 162
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK I+ I+
Sbjct: 163 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIR 222
Query: 151 TSRL 154
+++
Sbjct: 223 ENKI 226
>gi|432888944|ref|XP_004075100.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
4-like [Oryzias latipes]
Length = 614
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 28/166 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL + F +R L L++ N L +P+ DC+NL L LG+N
Sbjct: 114 VPNLRNLDLSYNKLQALQPGQFQGLRKLMSLHIRSNSLKGIPMRLFQDCRNLEFLDLGYN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAI------------------ 100
++ ++ + F L KL+ L+L++N+ S+++ S+ L NL
Sbjct: 174 RLRSISRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIRTMSQGLTWT 233
Query: 101 ------LDLSDNELTDVPCELSSLF-HLKSLFLGGNPIKTVRNDIL 139
LDLS NELT++ E+ F +L++L L N + V +++
Sbjct: 234 WASIQKLDLSGNELTELDAEVYQCFPNLQTLNLDANKLTNVSKEVV 279
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+HL L L HN + S F +R L EL LS N++T L T NL +L L +N
Sbjct: 66 LNHLIWLYLDHNYIASVDGMAFQGIRRLKELILSSNKITSLHNTTFHPVPNLRNLDLSYN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
K+ ++ F L KL L++++N + + + D NL LDL N L +
Sbjct: 126 KLQALQPGQFQGLRKLMSLHIRSNSLKGIPMRLFQDCRNLEFLDLGYNRLRSI 178
>gi|429961782|gb|ELA41326.1| hypothetical protein VICG_01566, partial [Vittaforma corneae ATCC
50505]
Length = 564
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L +LP ++ +++L L+L N+L LP + KNL HL LG N
Sbjct: 89 LKNLQHLDLYGNRL--RTLPYEVEELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLGHN 146
Query: 60 K----------INNME------NDYFL------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
K + N+E N + L L KL L L+ NK+ + +G++
Sbjct: 147 KFESFPTVIRKLKNLERLDLNDNKFGLFPIEIAELKKLQRLELRGNKLKLLPDEIGEMKE 206
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L L DNEL P ++ L L++L+L GN +K + ++I
Sbjct: 207 LRTLHLDDNELESFPTVIAELKKLQTLYLRGNKLKLLPDEI 247
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 28 SLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNKINNM--ENDYFLTLTKLSL------- 77
L +L LS N L T+ P + KNL HL L N++ + E + L L L
Sbjct: 68 KLEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLYGNRLRT 127
Query: 78 -------------LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
L+L +NK + + L NL LDL+DN+ P E++ L L+ L
Sbjct: 128 LPYEVEELKNLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNKFGLFPIEIAELKKLQRL 187
Query: 125 FLGGNPIKTVRNDI 138
L GN +K + ++I
Sbjct: 188 ELRGNKLKLLPDEI 201
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L KL L L N + + +G+L NL LDL N L +P E+ L +L+ L L GN +
Sbjct: 66 LVKLEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLYGNRL 125
Query: 132 KTV 134
+T+
Sbjct: 126 RTL 128
>gi|410930273|ref|XP_003978523.1| PREDICTED: leucine-rich repeat-containing protein 47-like [Takifugu
rubripes]
Length = 552
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ LK LDLS N L S LP I +R L LN+S N L +LP C L+ + + N
Sbjct: 92 LTSLKVLDLSVNNLTS--LPEGITRLRELNTLNVSCNSLEVLPDGLNQCTKLSTINISKN 149
Query: 60 KINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+I + +F L LS + +N I +++++ L L +LDLS+N+L+++P E+S
Sbjct: 150 RIMGFPSGFFSEDLDLLSSVMASDNSIDRLTADIQKLAALKVLDLSNNKLSEIPPEMSDC 209
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
LK + GN + R + + + + S + R + +GGG
Sbjct: 210 SKLKEINFRGNKLSDKRLEKMVNGCQTKSILDYLRGKGKGRQAEGGG 256
>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 281
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++LDLS+N+LV+ LP I ++ L L L +NQLT LP + K+L L L N
Sbjct: 59 LKELESLDLSNNQLVT--LPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNN 116
Query: 60 KINNM--ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
++ + E +Y L L L+L+NN+++ + + L L +LDL+DN+LT +P E+
Sbjct: 117 QLTTLPKEIEY---LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGY 173
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L L+ L+L N + T+ +I
Sbjct: 174 LKKLQELYLINNQLTTLPKEI 194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++LDL +N+L + LP I+ ++ L L+L NQLT LP + K L L L N
Sbjct: 105 LKDLESLDLRNNQLTT--LPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L L +LDL N+LT +P E+ L
Sbjct: 163 QLTTIPKEIG-YLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQ 221
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N T +I
Sbjct: 222 KLEKLYLKNNQFTTFPKEI 240
>gi|284010773|dbj|BAI66866.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 237
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L+L +NKL S F + LT L+L +N+L LP V NL L L N++ +
Sbjct: 43 KKLELDYNKLSSLPRMAFHGLNKLTNLDLQFNKLQALPPGVFDQLNNLKTLDLQQNQLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHL 121
+ + F +LTKL+ L+L+NNK+ + V D L L L+L N+L VP SL L
Sbjct: 103 LPSKIFDSLTKLTWLSLENNKLQRLPEGVFDKLTELKTLNLQINQLRRVPEGAFDSLSSL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI 145
L+L NP DIL SK I
Sbjct: 163 NILYLNNNPWDCSCRDILYLSKWI 186
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L++LKTLDL N+L S +F + LT L+L N+L LP V L L L
Sbjct: 86 QLNNLKTLDLQQNQLKSLPSKIFDSLTKLTWLSLENNKLQRLPEGVFDKLTELKTLNLQI 145
Query: 59 NKINNMENDYFLTLTKLSLLNLKNN 83
N++ + F +L+ L++L L NN
Sbjct: 146 NQLRRVPEGAFDSLSSLNILYLNNN 170
>gi|255077272|ref|XP_002502281.1| predicted protein [Micromonas sp. RCC299]
gi|226517546|gb|ACO63539.1| predicted protein [Micromonas sp. RCC299]
Length = 228
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N+L S LP I + SL EL L NQLT +P +L L L N
Sbjct: 27 LTSLVRLELDGNQLTS--LPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVRLDLDGN 84
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + LT L L L +N+++ V + +G L +L +L L N+LT +P E+ L
Sbjct: 85 LLTSVPAEIG-QLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSLPAEIGQLV 143
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
LK L+L GN + ++ +I Q
Sbjct: 144 SLKELYLNGNQLTSLPAEIGQ 164
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ L L N+L S ++ + SL L+L N LT +P +L LLL N+
Sbjct: 50 LTSLEELYLDENQLTSVPEEIW-QLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQ 108
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + LT L++L L N+++ + + +G L++L L L+ N+LT +P E+ L
Sbjct: 109 LTSVPAEIG-QLTSLTVLGLDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTS 167
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
++ L L GN + +V +I Q
Sbjct: 168 MEGLGLDGNQLTSVPAEIGQ 187
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+TL L N+L S +P I + SLT L L NQLT LP +L L L N
Sbjct: 96 LTSLETLLLYDNQLTS--VPAEIGQLTSLTVLGLDGNQLTSLPAEIGQLVSLKELYLNGN 153
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + LT + L L N+++ V + +G L +L LDL N+LT VP + L
Sbjct: 154 QLTSLPAEIG-QLTSMEGLGLDGNQLTSVPAEIGQLTSLVDLDLGRNKLTRVPAAIREL 211
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L LDL N L S +P I + SL L L NQLT +P +LT L L N
Sbjct: 73 LTSLVRLDLDGNLLTS--VPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGN 130
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L L N+++ + + +G L ++ L L N+LT VP E+ L
Sbjct: 131 QLTSLPAEIG-QLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPAEIGQLT 189
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L LG N + V I
Sbjct: 190 SLVDLDLGRNKLTRVPAAI 208
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
V + +G L +L L+L N+LT +P E+ L L+ L+L N + +V +I Q
Sbjct: 20 VPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQ 72
>gi|410922641|ref|XP_003974791.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
4-like [Takifugu rubripes]
Length = 513
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 28/257 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL + F +R L L+L N L +P V DC+NL L +G+N
Sbjct: 130 VPNLRNLDLSYNKLQTLQPNQFRGLRKLLSLHLRSNSLKTIPMRVFLDCRNLEFLDIGYN 189
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNE---LTDVPCEL 115
++ ++ + F L KL+ L+L++N+ S+++ ++ L NL +L L N LT P +
Sbjct: 190 RLRSLTRNAFAGLLKLTELHLEHNQFSKINLAHFPRLTNLRVLFLQWNRIKVLTQGPPWM 249
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSS-QESTSE 174
+ L+ L L GN ++ + Q + +++T N+D +S+ + T E
Sbjct: 250 WT--SLQKLDLSGNELQVLEPSTFQ----CLPNLQT-------LNLDSNKLSNISQQTLE 296
Query: 175 INIDKYKLDRTKTLTLCKVINIPESVYMRGM-SSQECTI------EINIDKYKLDRTKTL 227
+ I + L LC P +++ ++E T+ E +K D +T
Sbjct: 297 VWISLTSISLAGNLWLCNPNICPLVTWIQAFKGNKESTVICSGPKEAQGEK-ATDIVETY 355
Query: 228 TLCKVINIPESVYMNRP 244
+C+ +P + P
Sbjct: 356 NICRPTQVPSTTSPRTP 372
>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
pisum]
Length = 559
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L++L+TL LS N L + DSL ++ SL L+L +N+LT +P V LT L L F
Sbjct: 124 LTNLQTLALSENSLTCLPDSL---ANLTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRF 180
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I + +D L L +L+L+ NKI E+SS +G L + D+S N L +P E+ +
Sbjct: 181 NRIRTVSDD-ISKLVNLVMLSLRENKIKELSSGIGKLDKVVTFDVSHNHLEHLPEEIGNC 239
Query: 119 FHLKSLFLGGN 129
L +L L N
Sbjct: 240 IQLSTLDLQHN 250
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++ HNK+ D +P +F LT+LN+ N LT LP+ N+ L + N I
Sbjct: 338 SINFEHNKI--DKIPYGIFSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITK 395
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D L L +L L NN + + + +G+L L +LDL +N+L +P E+ L L+
Sbjct: 396 LPDD-IQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQEIGYLRELQK 454
Query: 124 LFLGGN 129
L L N
Sbjct: 455 LILQSN 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 32 LNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + LT +P+ D LT L L NK+ + ++ LT L L L N ++ +
Sbjct: 84 LDLSKSGLTKVPITIRDATQLTELYLYGNKLITLPSEIG-CLTNLQTLALSENSLTCLPD 142
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ +L +L +LDL N+LT+VP + L L +LFL N I+TV +DI
Sbjct: 143 SLANLTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRFNRIRTVSDDI 190
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 22 LFIDMRSLTELNLSYNQLTMLP-------VCTDCKNLTHLLLGFNKINNMENDYFLTLTK 74
L ++++ + + L+ N T P + D N H NKI+ + F
Sbjct: 305 LLVNLKEMNSITLARNSFTAYPTGGPAQFIAVDSINFEH-----NKIDKIPYGIFSKANY 359
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L+ LN+K+N ++ + +VG N+ L+++ N +T +P ++ L L+ L L N +K +
Sbjct: 360 LTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRL 419
Query: 135 RNDILQDSKRIISHIKTSRLDYHCQNV 161
I K + ++ ++L+ Q +
Sbjct: 420 PATIGNLQKLRVLDLEENKLETLPQEI 446
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 27/151 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDL NKL ++LP I +R L +L L NQL LP + + HL
Sbjct: 426 LQKLRVLDLEENKL--ETLPQEIGYLRELQKLILQSNQLLSLP-----RAIGHL------ 472
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNE-LTDVPCELSSLF 119
T L+ L++ NK+S + +G L NL L ++DN+ L +P EL+
Sbjct: 473 ------------TNLAYLSVGENKLSTLPEEIGTLENLEALYINDNQSLHHLPFELALCS 520
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L+ L + P+ + + + +++++K
Sbjct: 521 KLQLLGIENCPLSQLGDAVKGGPSLVMTYLK 551
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
++SL L LS N L LP + + L L L NK+ + + L +L L L++N+
Sbjct: 403 LQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQEIGY-LRELQKLILQSNQ 461
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ + +G L NLA L + +N+L+ +P E+ +L +L++L++ N
Sbjct: 462 LLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLENLEALYINDN 506
>gi|73977583|ref|XP_852485.1| PREDICTED: keratocan isoform 3 [Canis lupus familiaris]
Length = 350
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS--SNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ S+ D+ ++ L LS N+LT VP +S+
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVP-RISA 282
Query: 118 LFHLKSLFLGGNPIKTVRNDIL--------QDSKRIISHIKTSRLD 155
HL+ L L N IK V ++ QDS H++ RLD
Sbjct: 283 --HLQHLHLDHNKIKNVNVSVICPPILPAEQDSFGYGPHLRYLRLD 326
>gi|328866560|gb|EGG14944.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
Length = 680
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGF 58
+LS LK D++ + LP +RSL LN S N+LT PV D +L+HL L
Sbjct: 301 VLSDLKVEDINFTSNFFNHLPDISPIRSLHTLNFSKNKLTKFPVDILADLPHLSHLTLDK 360
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I+++ D L L L++++N I + +N+ +L L +DLS N++ +P L
Sbjct: 361 NSISSIPED-IDRLKSLCHLSMRSNSIDSIPANLCNLSQLVSIDLSHNKIKSLPKHFDKL 419
Query: 119 FHLKSLFLGGNPIKTVRN 136
+L+S+++ N I + N
Sbjct: 420 VNLRSIWISSNSIHQLPN 437
>gi|255949970|ref|XP_002565752.1| Pc22g18470 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592769|emb|CAP99135.1| Pc22g18470 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 988
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
T+DL H+++ P+ ++ E L+LS NQL +P +C +L +L + N
Sbjct: 110 TIDLGHSQIARIPEPVVDLIKDEVERLSLSNNQLFHIPYRFAECSHLRYLNIRANNFREF 169
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L +L+L NKI E+ + + L +L +L + N L D+P LS + L+
Sbjct: 170 PKGVY-KLPLLEILDLSRNKIKELPNEISKLKSLRVLSVMQNRLVDLPAGLSEMHKLQIF 228
Query: 125 FLGGNPIKTVRNDILQDSK 143
GNP++ DIL++++
Sbjct: 229 KCVGNPLRKPLRDILEETE 247
>gi|78100697|gb|ABB21169.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 371
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL LS N+L + L +F + +L +L L NQLT LP V LT L L +N
Sbjct: 106 LKNLETLWLSQNQLQALPLGVFDQLVNLADLRLYQNQLTSLPEGVFDKPTKLTRLDLDYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LT L L L+NN++ + V D L +L L+L N+L VP S
Sbjct: 166 QLKSLPSGVFDKLTLLEKLYLQNNQLQRLPEGVFDKLTDLKTLNLQINQLRRVPEGAFDS 225
Query: 118 LFHLKSLFLGGNPIKTVRNDIL------QDSKRIISHIKTSRLDYHCQNVDGGGMSSQES 171
L + + L NP DIL ++ K +S+I+ + DGG + E
Sbjct: 226 LVKISEVQLQENPWDCSCRDILYLSNWIREKKGTVSNIEAAE-------CDGGTKAVLEI 278
Query: 172 TSE 174
T E
Sbjct: 279 TEE 281
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+L +NKL S F + LT L LS NQL LP V KNL L L N++ +
Sbjct: 64 LELDYNKLSSLPSKAFHHLSKLTYLTLSTNQLQALPAGVFDQLKNLETLWLSQNQLQALP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHLKS 123
F L L+ L L N+++ + V D L LDL N+L +P + L L+
Sbjct: 124 LGVFDQLVNLADLRLYQNQLTSLPEGVFDKPTKLTRLDLDYNQLKSLPSGVFDKLTLLEK 183
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY-HCQNVDGGGMSSQESTSEINIDKYKL 182
L+L N ++ + + ++ +KT L + V G S SE+ + +
Sbjct: 184 LYLQNNQLQRLPEGVFDK----LTDLKTLNLQINQLRRVPEGAFDSLVKISEVQLQENPW 239
Query: 183 D 183
D
Sbjct: 240 D 240
>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
[Bos grunniens mutus]
Length = 585
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
LS+L+ LDLS N L + SLP+ +R L EL L L +PV C +L L L N
Sbjct: 119 LSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAGN 178
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ + + TKL ++LK+N+ + + DL NL I+DL N+LT +P E+ +L
Sbjct: 179 HLKSLPKE-IVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGNLT 237
Query: 120 HLKSLFLGGNPIKTV 134
LK ++ N + +
Sbjct: 238 KLKKFYVSYNSLAVL 252
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L LD+S+N+L +LP + ++ +TE+ LS N L +P C+ + LL +
Sbjct: 260 TRLSVLDVSYNRL--HALPHTLGELSQMTEVGLSGNHLEKIPRLL-CRWTSLFLLYLHNT 316
Query: 62 N-NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ F L L L+L N + + L NL +L L DN++ +P + SL
Sbjct: 317 GLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNKICQLPSDFGSLSK 376
Query: 121 LKSLFLGGNPIKTVRNDIL 139
LK L L GN + +IL
Sbjct: 377 LKILGLTGNQFSSFPKEIL 395
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+ L++SYN+L LP + +T + L N + + T L LL L N +
Sbjct: 262 LSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHLEKIPR-LLCRWTSLFLLYLHNTGLRV 320
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+ + L+NL LDLS N L P ++ SL +L+ L L N I + +D SK
Sbjct: 321 LRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNKICQLPSDFGSLSK 376
>gi|330795626|ref|XP_003285873.1| hypothetical protein DICPUDRAFT_149767 [Dictyostelium purpureum]
gi|325084178|gb|EGC37612.1| hypothetical protein DICPUDRAFT_149767 [Dictyostelium purpureum]
Length = 1809
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFN 59
L+ LK LDLS N L S+P F + SLT LNL N+ T P N H L L N
Sbjct: 191 LTSLKVLDLSGNSL--SSIPASFTKLSSLTCLNLKSNRFTSFPASICTLNYLHRLNLACN 248
Query: 60 KINNMENDYFLT---LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+I+ + + L L L L L++NK E ++ DL +L IL L DN++ VP ++
Sbjct: 249 QISINSSHHTLGVSLLPTLERLELQHNKFGEFPIDILDLTSLKILKLQDNDIEVVPEKIG 308
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQ 140
L +L LFL N I T+ + I Q
Sbjct: 309 QLNNLTELFLAENKITTLPSTIGQ 332
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 RSLTELNLSYNQLTMLPVCTDC-KNLTHLLL-------------GFNKINNMENDYFLTL 72
SL +L+LS N T P C NL L+L G + +NN N ++
Sbjct: 110 ESLVKLDLSGNHFTDFPSCVFVLPNLKTLILDNNQLTDINVQMCGGSSVNNGTNQPYIA- 168
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
KL L L NN + S + DL +L +LDLS N L+ +P + L L L L N
Sbjct: 169 CKLEELKLSNNSFTVFPSIITDLTSLKVLDLSGNSLSSIPASFTKLSSLTCLNLKSN 225
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L+ L+L HNK P+ +D+ SL L L N + ++P NLT L L
Sbjct: 263 LLPTLERLELQHNKF--GEFPIDILDLTSLKILKLQDNDIEVVPEKIGQLNNLTELFLAE 320
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
NKI + + + L L L+ NKIS + ++ L L IL L +NE VP E+
Sbjct: 321 NKITTLPST-IGQIVNLKKLYLEYNKISTLPTDFVKLQKLNILILHNNEFKSVPEEI 376
>gi|347972558|ref|XP_309461.4| AGAP011186-PA [Anopheles gambiae str. PEST]
gi|333466591|gb|EAA05071.4| AGAP011186-PA [Anopheles gambiae str. PEST]
Length = 1360
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L L+L HN+L +F + SL LNL +N + +L +D KNL L L N++
Sbjct: 352 LVVLNLGHNQLSKVDQHVFKGLYSLQILNLEHNAIELLADGAFSDLKNLHALFLSHNRLR 411
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSLFHL 121
+E +F L L+ L L++N+I+ + +L +L L L+DN L ++P + SL L
Sbjct: 412 QIEPYHFSELYVLNQLILESNQIAYIHERAFENLTHLHDLSLNDNRLEEIPSGMKSLKFL 471
Query: 122 KSLFLGGNPIKTVRN 136
+SL LG N I + N
Sbjct: 472 QSLDLGKNQIAEINN 486
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 30/170 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTE------------------------LNLSYN 37
L L+ LDLS N+L + + LF+ R + + L+LS N
Sbjct: 275 LGTLEVLDLSDNRLTALTPELFVSSRKIRQVYLQNNSLSVLAPGVFEGLDRLETLDLSRN 334
Query: 38 QLTMLPVCTDC----KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV- 92
QLT V D L L LG N+++ ++ F L L +LNL++N I ++
Sbjct: 335 QLTSTWVKRDTFAGQVRLVVLNLGHNQLSKVDQHVFKGLYSLQILNLEHNAIELLADGAF 394
Query: 93 GDLINLAILDLSDNELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQD 141
DL NL L LS N L + P S L+ L L L N I + ++
Sbjct: 395 SDLKNLHALFLSHNRLRQIEPYHFSELYVLNQLILESNQIAYIHERAFEN 444
>gi|348536608|ref|XP_003455788.1| PREDICTED: ras suppressor protein 1-like [Oreochromis niloticus]
Length = 277
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 28/154 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS++ L LSHNKL + +P I ++++L LN+ NQ+ LP + + L HL LG N
Sbjct: 39 LSNITQLVLSHNKLTA--VPANISELKNLEVLNMFNNQIEELPTQISSLQKLKHLNLGMN 96
Query: 60 KINNMENDY------------------------FLTLTKLSLLNLKNNKISEVSSNVGDL 95
+++ + + F LT L L L +N + +++G L
Sbjct: 97 RLSTLPRGFGSLPALEVLDLTYNNLNQNCLPGNFFYLTTLRALYLSDNDFEVLPADIGKL 156
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L IL L DN+L +P E+ L HLK L + GN
Sbjct: 157 TKLQILSLRDNDLISLPKEIGDLAHLKELHIQGN 190
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 45 CTDCKNLTHLLLGFNKINNM-ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDL 103
C D KNL + + I+NM + TL+ ++ L L +NK++ V +N+ +L NL +L++
Sbjct: 12 CRD-KNLPEVEMCDRGISNMLDIPGLFTLSNITQLVLSHNKLTAVPANISELKNLEVLNM 70
Query: 104 SDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+N++ ++P ++SSL LK L LG N + T+
Sbjct: 71 FNNQIEELPTQISSLQKLKHLNLGMNRLSTL 101
>gi|421130781|ref|ZP_15590973.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410357884|gb|EKP05089.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 312
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++L LS N+L LP +++++L L+LS NQL +LP KNL L L N
Sbjct: 70 LKNLQSLYLSDNQLTI--LPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L N+++ + +G L NL L+LS+N LT VP E+ L
Sbjct: 128 KLTTLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L GN + T+ N+I Q
Sbjct: 187 NLQELHLSGNQLVTLPNEIGQ 207
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+LV LP I +++L L+L N+LT LP +NL L N
Sbjct: 93 LQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ V +G L NL L LS N+L +P E+ L
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLR 209
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ I
Sbjct: 210 NLQELNLKWNQLVTLPKGI 228
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+ +L LNLS N+LT +P KNL L L N++ + N+ L L LNLK N
Sbjct: 161 QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIG-QLRNLQELNLKWN 219
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + +G L NL LDL +N LT +P E L L+ L L N
Sbjct: 220 QLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNN 265
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +LNL K++ + +G L NL L LSDN+LT +P E+ L +L+ L L N + +
Sbjct: 50 VRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVIL 109
Query: 135 RNDI 138
N+I
Sbjct: 110 PNEI 113
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L LS N+LV+ LP I +R+L ELNL +NQL LP +NL L L N
Sbjct: 185 LKNLQELHLSGNQLVT--LPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHEN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKI 85
++ + + F L L LNL NN++
Sbjct: 243 RLTILPRE-FGQLQSLQKLNLVNNRL 267
>gi|326521798|dbj|BAK00475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1104
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFN 59
LS+L LDLS NK + P ++ LTE L N+LT +P CK L L L N
Sbjct: 503 LSNLFILDLSWNKFSGEIPPSMGNLNQLTEFYLQENELTGSIPTSLAGCKKLVALNLSSN 562
Query: 60 KINN-MENDYFLTLTKLS-LLNLKNNKISE-VSSNVGDLINLAILDLSDNELTD-VPCEL 115
+N + F L +LS LL++ +N+ + + +G LINL L+LS N+LT +P L
Sbjct: 563 GLNGSINGPMFSKLYQLSWLLDISHNQFRDSIPPEIGSLINLGSLNLSHNKLTGKIPSTL 622
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG 163
+ L+SL LGGN ++ L + K + LD+ N+ G
Sbjct: 623 GACVRLESLNLGGNHLEGSIPQSLANLKGV------KALDFSQNNLSG 664
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM-LPVCTDCKNLTHLLLGFNKI 61
S L LDL+ N L P ++ LT L ++ NQL +P + +L L L +N +
Sbjct: 260 SKLDYLDLTGNSLTGTVPPSVGNLTRLTGLLIAQNQLQGNIPDLSKLSDLQFLDLSYNNL 319
Query: 62 NNMENDYFLTLTKLSLLNLKNNKI-SEVSSNVGD-LINLAILDLSDNEL-TDVPCELSSL 118
+ + L L L L NN + + S++G+ L N+ L +S+N ++P L++
Sbjct: 320 SGIVPPSIYNLPLLRFLGLANNNLRGTLPSDMGNTLSNINSLIMSNNHFEGEIPASLANA 379
Query: 119 FHLKSLFLGGNPIKTV 134
++ L+LG N + V
Sbjct: 380 SSMEFLYLGNNSLSGV 395
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT--MLPVCTDCKNLTHLLLGFNKINNM 64
LDL L + P ++ SL ++L NQL+ + P L +L L N ++
Sbjct: 72 ALDLEAQGLTGEIPPCMSNLTSLVRIHLPSNQLSGHLPPEIGRLTGLQYLNLSSNALSGE 131
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELT-DVPCELSSLFHLK 122
+ L ++ L++N I V ++G L NL+ LDLS NEL+ ++P L S L+
Sbjct: 132 IPQSLSLCSSLEVVALRSNSIEGVIPLSLGTLRNLSSLDLSSNELSGEIPPLLGSSPALE 191
Query: 123 SLFLGGN 129
S+ L N
Sbjct: 192 SVSLTNN 198
>gi|383860606|ref|XP_003705780.1| PREDICTED: leucine-rich repeat-containing protein 47-like
[Megachile rotundata]
Length = 531
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L LK LD S NKLVS LP I + LT +NLS N L LP L+ L + N+
Sbjct: 90 LDKLKFLDCSSNKLVS--LPDEIGKLPQLTTMNLSANLLKSLPTQIGNTKLSVLNISNNQ 147
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + LT LS + + N+I E+ + + L L IL+++DN ++ VP E++
Sbjct: 148 FETFPDVCYPELTHLSEIYVNGNQIKEIPAAINQLSCLKILNVADNLISVVPGEIADCNK 207
Query: 121 LKSLFLGGNPIKTVRNDILQDS---KRIISHIKTSRLDYHCQNVDGG 164
LK L L GN + R L D K+II +IK HC G
Sbjct: 208 LKELQLKGNKLTDKRLLKLVDQCHNKQIIEYIK-----LHCPRSSGS 249
>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 539
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L N+L + LP I ++SL EL L NQLT +P + L L L FN
Sbjct: 341 LQSLQSLTLWGNQLTT--LPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFN 398
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+++ + +G+L L LDL N+LT +P E+ L
Sbjct: 399 QLTAIPKE-IEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQ 457
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L+L N + T+ +I
Sbjct: 458 NLKDLYLNNNKLTTLPKEI 476
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + LP I ++ L EL+L NQ T LP + L L LG N
Sbjct: 180 LQKLQKLSLGRNQLTT--LPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSN 237
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L LNL +N+ + + +G+L L L L+ N+LT +P E+ L
Sbjct: 238 RFTTLPKE-IKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQ 296
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L GN + T+ +I
Sbjct: 297 SLQRLTLWGNQLTTLPKEI 315
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L LS N+L + +P I+ +++L +L+L NQLT LP + + L L LG+
Sbjct: 386 QLQYLQRLSLSFNQLTA--IPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGY 443
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L L NNK++ + +G L L L L++N+LT +P E+ L
Sbjct: 444 NQLTALPEEIG-KLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKL 502
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
LK+L L NP + + +Q
Sbjct: 503 QKLKNLHLADNPFLRSQKEKIQ 524
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L L+ L L N+L + ++ ++ L L+LS+NQLT +P + +NL L L N+
Sbjct: 364 LQSLQELILGKNQLTTIPKEIW-QLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQ 422
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L KL L+L N+++ + +G L NL L L++N+LT +P E+ L
Sbjct: 423 LTTLPKEIG-NLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQK 481
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK L+L N + T+ +I
Sbjct: 482 LKDLYLNNNKLTTLPKEI 499
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L + LP I ++++L +LNL+ NQ T LP + + L L LG N
Sbjct: 134 LQNLRDLDLSSNQLTT--LPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L N+ + + +G L L L L N T +P E+ L
Sbjct: 192 QLTTLPEEIG-KLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQ 250
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N T+ +I
Sbjct: 251 NLQWLNLDSNRFTTLPKEI 269
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L L N+ + LP I +++L LNL N+ T LP + + L L L N
Sbjct: 226 LQKLKELHLGSNRFTT--LPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHN 283
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + +G L +L L L N+LT +P E+ L
Sbjct: 284 QLTTLPKEIG-KLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQ 342
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+SL L GN + T+ +I
Sbjct: 343 SLQSLTLWGNQLTTLPKEI 361
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 23/128 (17%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
+++L +L+LS NQLT LP +I N++N L LNL +N+
Sbjct: 134 LQNLRDLDLSSNQLTTLP---------------KEIGNLQN--------LQDLNLNSNQF 170
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI 145
+ + + +L L L L N+LT +P E+ L LK L L GN T+ +I + K
Sbjct: 171 TTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLK 230
Query: 146 ISHIKTSR 153
H+ ++R
Sbjct: 231 ELHLGSNR 238
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
N+ + + +G L NL LDLS N+LT +P E+ +L +L+ L L N T+ +I
Sbjct: 121 NDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEI 177
>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
Length = 683
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGF 58
S LK LDL HNKL +P I +RSLT L L +N++T V D + NLT L L
Sbjct: 232 SQLKVLDLRHNKLAE--IPSVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLRE 287
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NKI + L L+ L++ +N + + ++G+ +NL+ LDL NEL D+P S+
Sbjct: 288 NKIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP---DSI 343
Query: 119 FHLKSLFLGG 128
+LKSL G
Sbjct: 344 GNLKSLVRLG 353
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 422 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 479
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G+L L ILDL +N + +P E+ L L+
Sbjct: 480 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQR 538
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 539 LILQTNQITMLPRSI 553
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L L+ N L S LP + + L L+L +N+L +P V ++LT L L FN
Sbjct: 208 LVSLRNLALNENSLTS--LPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + +D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ +
Sbjct: 266 RITAVADD-LRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 324
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L N + + + I
Sbjct: 325 NLSALDLQHNELLDIPDSI 343
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ P + N+ + L N+I+ + F L+ LN
Sbjct: 389 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 448
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 449 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTI 507
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+ L+LS + +T++P +C +LT L L NKI + + L L L L N ++
Sbjct: 164 GIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIG-CLVSLRNLALNENSLT 222
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+ ++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 223 SLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQ 276
>gi|428171579|gb|EKX40495.1| hypothetical protein GUITHDRAFT_75548, partial [Guillardia theta
CCMP2712]
Length = 158
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L TL LSHNKL S L +F ++ + L++SYNQL+ LP + K L LL+ N+
Sbjct: 37 LVSLTTLFLSHNKLTSIPLGIFTNVSGIQYLSISYNQLSTLPTDINELKELKFLLVNNNQ 96
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
+ + + LT L L L N++S + ++ L L L LS N++T +P
Sbjct: 97 LTSFPDGASTKLTNLFFLELSYNQLSSIPGSISGLPGLVELILSHNQITSIPI 149
>gi|242073460|ref|XP_002446666.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
gi|241937849|gb|EES10994.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
Length = 511
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 29/158 (18%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
+LS LK L++S N+L +LP I RSL EL++SYN LT LP + + NL L +
Sbjct: 273 LLSKLKILNVSSNRL--RALPDSISKCRSLVELDVSYNGLTYLPTNIGYELVNLRKLWIH 330
Query: 58 FNKINNMEND----------------------YFLTLTKLSLLNLKNN--KISEVSSNVG 93
NK+ ++ + F L+ L +LNL +N + E+ S+ G
Sbjct: 331 MNKLRSLPSSVCEMTSLYLLDAHFNELCGLPSAFGKLSSLEILNLSSNFSDLKELPSSFG 390
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
DL+NL LDLS+N++ +P L L+ L L NP+
Sbjct: 391 DLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPL 428
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L+ N LVS LP I + S L LN+S N+L LP + C++L L + +N
Sbjct: 251 LDHLEELRLAANSLVS--LPDTIGLLSKLKILNVSSNRLRALPDSISKCRSLVELDVSYN 308
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L + NK+ + S+V ++ +L +LD NEL +P L
Sbjct: 309 GLTYLPTNIGYELVNLRKLWIHMNKLRSLPSSVCEMTSLYLLDAHFNELCGLPSAFGKLS 368
Query: 120 HLKSLFLGGN 129
L+ L L N
Sbjct: 369 SLEILNLSSN 378
>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 528
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+TLDL +NKL + LP I +++ L L+ NQLT LP + + L L L N
Sbjct: 354 LQKLQTLDLGNNKLTA--LPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHN 411
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + +L L +L L +N+++ + +G+L NL L+L N+LT +P E+ L
Sbjct: 412 NLATIPQEIG-SLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLR 470
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+L+SL L NP+ + +I + + H+K RL+
Sbjct: 471 NLESLDLSENPLTSFPEEIGK-----LQHLKWLRLE 501
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+ L L N+ + LP I ++ L EL+L NQLT LP + + L L LG N
Sbjct: 147 LQKLQELYLGDNQFAT--LPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGIN 204
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL LNL +N+++ + +G L L L+L+ N+LT +P E+ +L
Sbjct: 205 QLTTLPKEIG-NLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQ 263
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L+L N + T+ +I
Sbjct: 264 NLQQLYLYSNQLTTLPKEI 282
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L S +P I ++++L +L+L NQLT++P + + L L LG N
Sbjct: 285 LQKLQELHLSDNQLTS--VPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQN 342
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L+L NNK++ + +G L N L L+ N+LT +P E+ +L
Sbjct: 343 QLTILPKEIG-NLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQ 401
Query: 120 HLKSLFLGGNPIKTVRNDI 138
LK L+L N + T+ +I
Sbjct: 402 KLKWLYLAHNNLATIPQEI 420
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 35 SYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
S NQLT LP + +NL L LG N++ + + L L L+L N+++ + +G
Sbjct: 64 SNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVG-KLQNLEELDLGQNQLTTLPEEIG 122
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L NL L+L+ N+LT +P E+ +L L+ L+LG N T+ I
Sbjct: 123 KLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAI 167
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 11 SHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDY 68
S+N+L + LP I+ +++L L L NQLT LP +NL L LG N++ + +
Sbjct: 64 SNNQLTT--LPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEI 121
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L L LNL N+++ + +G+L L L L DN+ +P + L L+ L LG
Sbjct: 122 G-KLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGI 180
Query: 129 NPIKTVRNDI 138
N + T+ +I
Sbjct: 181 NQLTTLPKEI 190
>gi|332023414|gb|EGI63657.1| Leucine-rich repeat-containing protein 47 [Acromyrmex echinatior]
Length = 526
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L+ LK LD S NKL S LP + D L+ +NL+ N L +P T C L+ L L N+
Sbjct: 87 LAKLKVLDCSRNKLTS--LPRELGDHPHLSTINLASNCLRDVPSLTLCTKLSILDLSNNQ 144
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L LS +++ N I+E+ + L L IL+++DN ++ VP EL+
Sbjct: 145 LKAFPDVCHTELIHLSEIHVNGNYITEIPITISRLQGLKILNIADNSISVVPSELADCSK 204
Query: 121 LKSLFLGGNPIKTVRNDILQD---SKRIISHIK----TSRLDYHCQNVDGGGMSSQE-ST 172
LK ++L N + R L + +K+I+ ++K S L N G Q+ S
Sbjct: 205 LKEVYLQENKLSDRRLTKLINQCSTKQILDYVKLHCPRSELSTTENNTSKKGKRGQKVSE 264
Query: 173 SEINID--KYKLDRTKTLTLCKVINIPESV 200
SE +D +KL K L VI I E V
Sbjct: 265 SENVVDSLAHKLKVLKILDDTPVIKITEHV 294
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D L L+ L L +N+I + + L L +LD S N+LT +P EL HL ++ L
Sbjct: 59 DEIEKLANLATLVLHSNEIVTLPCEIAKLAKLKVLDCSRNKLTSLPRELGDHPHLSTINL 118
Query: 127 GGNPIKTV 134
N ++ V
Sbjct: 119 ASNCLRDV 126
>gi|299856771|pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 177
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R + L S+ I + + DG G + ES +
Sbjct: 178 LGKLQTITLFGNQFDCSRCETLYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 229
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 230 SDGKVVRTVT 239
>gi|444720712|gb|ELW61488.1| Keratocan [Tupaia chinensis]
Length = 352
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS--SNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ SN D+ ++ L LS N+LT VP +S+
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSNGFDVSSILDLQLSHNQLTKVP-RISA 282
Query: 118 LFHLKSLFLGGNPIKTVRNDIL----------QDSKRIISHIKTSRLD 155
HL+ L L N I++V ++ +DS H++ RLD
Sbjct: 283 --HLQHLHLDHNRIRSVNVSVICPNPTTLPEERDSFSYGPHLRYLRLD 328
>gi|427736833|ref|YP_007056377.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427371874|gb|AFY55830.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 216
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
LKTL+L+ + LP I + +L LNL NQL LP + NL +L L NK++
Sbjct: 18 LKTLNLARQSI--KLLPKEIGQLTNLKVLNLDENQLITLPREIGNLTNLEYLCLSRNKLS 75
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++ ++ L L L+L+ N+I+ + +G + NL LDL N L+++P E+ L LK
Sbjct: 76 SLPSEIG-KLINLEELDLEENQINSLPPEIGKINNLQCLDLESNHLSELPREIGQLTRLK 134
Query: 123 SLFLGGNPIKTVRNDILQ 140
SL+L GN + + +DI Q
Sbjct: 135 SLYLSGNQLNELPSDIGQ 152
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++LK L+L N+L++ LP I ++ +L L LS N+L+ LP NL L L N
Sbjct: 38 LTNLKVLNLDENQLIT--LPREIGNLTNLEYLCLSRNKLSSLPSEIGKLINLEELDLEEN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+IN++ + + L L+L++N +SE+ +G L L L LS N+L ++P ++ L
Sbjct: 96 QINSLPPEIG-KINNLQCLDLESNHLSELPREIGQLTRLKSLYLSGNQLNELPSDIGQLT 154
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L +L+LGGN + ++ +I
Sbjct: 155 RLHTLYLGGNQLTSLPVEI 173
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L+ L LS NKL SLP I + +L EL+L NQ+ LP NL L L N
Sbjct: 61 LTNLEYLCLSRNKL--SSLPSEIGKLINLEELDLEENQINSLPPEIGKINNLQCLDLESN 118
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT+L L L N+++E+ S++G L L L L N+LT +P E+ L
Sbjct: 119 HLSELPREIG-QLTRLKSLYLSGNQLNELPSDIGQLTRLHTLYLGGNQLTSLPVEIKKLT 177
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRII 146
L + L NPI + + K+II
Sbjct: 178 GLIEIELSKNPISIPLGVLKKSPKQII 204
>gi|335308366|ref|XP_003361200.1| PREDICTED: ras suppressor protein 1-like [Sus scrofa]
Length = 237
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+H+ L LSHNKL + P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 69 LAHITQLVLSHNKLTTVP-PNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 127
Query: 61 INNMENDY------------------------FLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+N + + F LT L L L +N + ++G L
Sbjct: 128 LNTLPRGFGSLPALEVLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLT 187
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L IL L DN+L +P E+ L LK L + GN
Sbjct: 188 KLQILSLRDNDLISLPKEIGELTQLKELHIQGN 220
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 70 LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+TL ++ L L +NK++ V N+ +L NL +L+ +N++ ++P ++SSL LK L LG N
Sbjct: 67 ITLAHITQLVLSHNKLTTVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMN 126
Query: 130 PIKTV 134
+ T+
Sbjct: 127 RLNTL 131
>gi|284010609|dbj|BAI66784.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 274
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L L L+ NKL + + +F + +LT+L L+ NQLT LP + LT L L N
Sbjct: 63 LSKLTYLSLTGNKLQALPIGVFDQLVNLTDLRLNRNQLTSLPPGIFDKLTKLTRLDLDRN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
++ ++ F LTKL+ L L +NK+ + + V D L L L L+DN+L VP E +
Sbjct: 123 QLESLPQGIFDKLTKLTDLRLSSNKLQSLPNGVFDKLTQLGTLYLNDNQLRSVPKEAFDN 182
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L ++K L L NP DIL
Sbjct: 183 LQNIKDLRLEENPWDCSCRDIL 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINN 63
K L L++NKL F + LT L+L+ N+L LP+ NLT L L N++ +
Sbjct: 43 KKLVLNYNKLRELEPTAFHSLSKLTYLSLTGNKLQALPIGVFDQLVNLTDLRLNRNQLTS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHL 121
+ F LTKL+ L+L N++ + + D L L L LS N+L +P + L L
Sbjct: 103 LPPGIFDKLTKLTRLDLDRNQLESLPQGIFDKLTKLTDLRLSSNKLQSLPNGVFDKLTQL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLDYHCQNV 161
+L+L N +++V + + + I ++ + D C+++
Sbjct: 163 GTLYLNDNQLRSVPKEAFDNLQNIKDLRLEENPWDCSCRDI 203
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
SY +LT +P + D K L+L +NK+ +E F +L+KL+ L+L NK+ + V
Sbjct: 27 SYKKLTAIPSNIPADTK---KLVLNYNKLRELEPTAFHSLSKLTYLSLTGNKLQALPIGV 83
Query: 93 GD-LINLAILDLSDNELTDVP 112
D L+NL L L+ N+LT +P
Sbjct: 84 FDQLVNLTDLRLNRNQLTSLP 104
>gi|260792975|ref|XP_002591489.1| hypothetical protein BRAFLDRAFT_247337 [Branchiostoma floridae]
gi|229276695|gb|EEN47500.1| hypothetical protein BRAFLDRAFT_247337 [Branchiostoma floridae]
Length = 184
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ L ++HNK+ F ++ L E++LS+NQ+T L T L +LLL NKI
Sbjct: 45 LRRLRRLIMAHNKITRIEPGAFAELPQLWEIDLSFNQITTLQAGTFADPLQNLLLNSNKI 104
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPC-ELSSLF 119
+ + F L L L L +N+I+ + SS DL L +L+L N++T + + L
Sbjct: 105 SKINPGVFAALPLLETLALSSNQITMIQSSTFADLPQLYLLNLISNQITMIRTGTFADLP 164
Query: 120 HLKSLFLGGNPIKTVR 135
L++L+L N I ++
Sbjct: 165 SLQTLYLESNKITEIQ 180
>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 358
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+L+ LP I +++L EL L+YNQ P K+L L L N
Sbjct: 49 LKNLQMLDLSDNQLII--LPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNN 106
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN++ +S + L NL L L +N+LT P E+ L
Sbjct: 107 QLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQ 165
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LKSLFL N + T +I
Sbjct: 166 NLKSLFLSNNQLTTFPKEI 184
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 164 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 222 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 280
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 281 NLKMLSLDANQLTALPKEI 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 210 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+L +P E+ L
Sbjct: 268 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQ 326
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 327 NLQTLYLRNN 336
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L L LS+N+L LP+ I +++L ELNL NQL T+ KNL L L N
Sbjct: 95 LKSLHKLYLSNNQLTI--LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L L NN+++ +G L NL L LS+N+LT P E+ L
Sbjct: 153 QLTAFPKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 211
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LG N + T+ N+I
Sbjct: 212 KLQWLGLGDNQLTTIPNEI 230
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L + P I +++L L LS NQLT P +NL L L N
Sbjct: 141 LKNLQKLYLDNNQLTA--FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 198
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L
Sbjct: 199 QLTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQ 257
Query: 120 HLKSLFLGGNPIKTV 134
+L+ LFL N KT+
Sbjct: 258 NLQVLFLSYNQFKTI 272
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT P +NL L L N+
Sbjct: 118 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQ 176
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 177 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 235
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 236 LQELNLDVNQLTTIPKEIGQ 255
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +LDLSDN+L +P E+ L +L+ LFL N KT +I
Sbjct: 34 LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIE 93
Query: 140 Q 140
Q
Sbjct: 94 Q 94
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 28/138 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL +LP I +++L L+LS NQL +LP KNL L L +N+
Sbjct: 29 VRVLILSEQKL--KALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQ-- 84
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
F T K + L +L L LS+N+LT +P E+ L +L+
Sbjct: 85 ------FKTFPK----------------EIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQ 122
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N +KT+ +I Q
Sbjct: 123 ELNLWNNQLKTISKEIEQ 140
>gi|357611178|gb|EHJ67353.1| putative toll [Danaus plexippus]
Length = 1132
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L LD+SHN++ + LF D+ +L L L N + +P V +NL L+L N
Sbjct: 193 LKRLVYLDISHNRVSKMEIALFRDLHNLQILKLQDNFIEHIPENVFISLQNLHTLILSNN 252
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
++ N+E+ F+ L LS+L++ +N+IS++ + + +L L ++ N L +VP L +
Sbjct: 253 RLTNIESYAFIGLPVLSVLSIDSNRISKIHPHALRNCTSLQDLHINVNRLDEVPIALKEI 312
Query: 119 FHLKSLFLGGNPIKTVRN 136
LK+L LG N I ++ N
Sbjct: 313 PQLKTLDLGENLIVSIEN 330
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC----KNLTHLLLGFNK 60
LK + L++N + + LF D+ L L+LSYN+LT + T K L +L + N+
Sbjct: 146 LKEIYLNNNTITVLAPGLFSDLLQLLILDLSYNELTSDWINTSTFSGLKRLVYLDISHNR 205
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPC-ELSSL 118
++ ME F L L +L L++N I + NV L NL L LS+N LT++ L
Sbjct: 206 VSKMEIALFRDLHNLQILKLQDNFIEHIPENVFISLQNLHTLILSNNRLTNIESYAFIGL 265
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIIS-HIKTSRLD 155
L L + N I + L++ + HI +RLD
Sbjct: 266 PVLSVLSIDSNRISKIHPHALRNCTSLQDLHINVNRLD 303
>gi|168022630|ref|XP_001763842.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684847|gb|EDQ71246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 681
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 27/157 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLP-VCTDCKNLTHLLLGFN 59
HL LDLSHN L S +F LTEL+LSYNQLT P + + LT + L N
Sbjct: 63 FQHLSVLDLSHNNLASGIPEMFPP--KLTELDLSYNQLTGSFPYLIINIPTLTSIKLNNN 120
Query: 60 KINN-MENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELS 116
K++ ++ F LT L L++ NN I+ + +GD+++L L++ +N+LT +P L+
Sbjct: 121 KLSGTLDGQVFSKLTNLITLDISNNAITGPIPEGMGDMVSLRFLNMQNNKLTGPIPDTLA 180
Query: 117 SLFHLKSL---------FL-----------GGNPIKT 133
++ L++L FL GGNP+ T
Sbjct: 181 NIPSLETLDVSNNALTGFLPPNLNPKNFRYGGNPLNT 217
>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
Length = 1136
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +L TL N L ++ +P + SL EL L NQLT LP K L+ L + N+
Sbjct: 266 LKNLVTLKADSNAL-TELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQ 324
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + +KLS+L L+ N++ E+ VG L NL +LDL DN L +P ++ LF+
Sbjct: 325 LEEIPSA-IGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFN 383
Query: 121 LKSLFL 126
L++L+L
Sbjct: 384 LRALWL 389
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L++L L NK++ P + +L EL+L N+L+ LP C NL L L N +
Sbjct: 62 LRSLSLGQNKILRVP-PAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTR 120
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ D L+ L+ L L ++++ ++ L NL LD+ +N+L +P + L HL+
Sbjct: 121 LP-DVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRE 179
Query: 124 LFLGGN-----PIKTVRNDILQD 141
L LG N P+ ++L+D
Sbjct: 180 LDLGRNELSHLPLNMGSLEVLED 202
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKI 61
HL+TLD+S N L + LP I D+ L EL+++ N++ LP KNL L N +
Sbjct: 222 HLRTLDVSQNDLTA--LPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNAL 279
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + L L L NN+++ + + +G L L++L + +N+L ++P + L
Sbjct: 280 TELVPT-IGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKL 338
Query: 122 KSLFLGGNPIK 132
L L GN ++
Sbjct: 339 SILTLRGNRLR 349
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L+HL + S +L D ID +++L L++ NQL +LP +C K+L L LG
Sbjct: 131 LTHLYLFETSLTQLPPD-----IDQLQNLRSLDVRENQLRILPPAIC-QLKHLRELDLGR 184
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++++ + +L L L + +N +S V ++ +L LD+S N+LT +P E+ L
Sbjct: 185 NELSHLPLN-MGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDL 243
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L L + N I + N I
Sbjct: 244 EQLCELSIAENRIAALPNSI 263
Score = 43.5 bits (101), Expect = 0.087, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
S+LK LDL N L LP + + SLT L L LT LP D +NL L + N+
Sbjct: 106 SNLKILDLRLNLLTR--LPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQ 163
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L+L N++S + N+G L L L + N L+ VP L+S H
Sbjct: 164 LRILP-PAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGH 222
Query: 121 LKSLFLGGNPIKTVRNDI 138
L++L + N + + +I
Sbjct: 223 LRTLDVSQNDLTALPKEI 240
Score = 41.2 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
KL L+L NKI V +G LI L L L DNEL+D+P EL +LK L L
Sbjct: 61 KLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDL 113
>gi|160333676|ref|NP_001103842.1| leucine-rich repeat-containing protein 47 [Danio rerio]
gi|159155895|gb|AAI54502.1| Si:ch211-147a11.7 protein [Danio rerio]
Length = 565
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +K LDLS N+L +LP I + L LN+S N LT LP + C L + + N
Sbjct: 96 LKAVKVLDLSVNQL--QALPEEICALTELNTLNVSCNSLTALPDGLSKCVKLASINVSKN 153
Query: 60 KINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+++ + D + + L LS + N I E+SS + +L +L +LDLS+N+L ++P EL+
Sbjct: 154 ELSRLPEDLWCSGLELLSSIIASENAIEELSSEIQNLPSLKVLDLSNNKLQELPAELADC 213
Query: 119 FHLKSLFLGGNPIKTVR 135
LK GN +K R
Sbjct: 214 PKLKETNFKGNKLKDKR 230
>gi|456874796|gb|EMF90065.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 929
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++ LT+LNL N+L+ LP + L HL L N+ + + D L+L L +LN+++N
Sbjct: 573 NLKRLTDLNLDSNKLSALPAGIGKLEQLIHLYLDSNQFS-IFPDAVLSLKNLEMLNVRSN 631
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+I +S +G L +L L L +N+L+DVP +S + L L L N + + Q
Sbjct: 632 QIPSLSEGIGTLASLKDLSLHENQLSDVPSAISKMAQLAELNLRKNKLTKFPEAVTQ 688
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L L+L NKL +LP I + L L L NQ ++ P KNL L + N
Sbjct: 574 LKRLTDLNLDSNKL--SALPAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNVRSN 631
Query: 60 KINNM----------------END------YFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+I ++ EN + +L+ LNL+ NK+++ V + N
Sbjct: 632 QIPSLSEGIGTLASLKDLSLHENQLSDVPSAISKMAQLAELNLRKNKLTKFPEAVTQIKN 691
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L ILDLS+N++T +P + +L L+ L L G PI ++
Sbjct: 692 LRILDLSENQITSIPDSIGNLGTLEVLDLEGLPINSL 728
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 26/126 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L+ LK L L N+L SD M L ELNL N+LT P T KNL
Sbjct: 643 LASLKDLSLHENQL-SDVPSAISKMAQLAELNLRKNKLTKFPEAVTQIKNL--------- 692
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+L+L N+I+ + ++G+L L +LDL + +P +L L
Sbjct: 693 ---------------RILDLSENQITSIPDSIGNLGTLEVLDLEGLPINSLPAQLEKLEA 737
Query: 121 LKSLFL 126
L SL L
Sbjct: 738 LISLRL 743
>gi|429961197|gb|ELA40743.1| hypothetical protein VICG_02221, partial [Vittaforma corneae ATCC
50505]
Length = 209
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 32/184 (17%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +LK L L+ N KL+ D + ++++ L NLS N+L LP + + NL L LG
Sbjct: 21 LENLKALFLNANRLKLLPDEIGNLVNLQYL---NLSVNELESLPAIIGNLINLKILYLGD 77
Query: 59 NKINNM--ENDYFLTLTKLSLL--------------------NLKNNKISEVSSNVGDLI 96
NK+ ++ E + +L KL+LL +L NK+ + +G+L
Sbjct: 78 NKLESLPAEIEKLKSLQKLNLLKNRFEIFPNVVGELKDLRGLSLDGNKLETLPPEIGELE 137
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRI-ISHIKTSRLD 155
NL IL+LS+N+L +P + L +L+ L+LGGN ++T+ I +I IS I SR
Sbjct: 138 NLKILNLSNNKLETLPDTIGELENLQELYLGGNKLETIPVAIGNLKNQICISMITNSR-- 195
Query: 156 YHCQ 159
HCQ
Sbjct: 196 -HCQ 198
>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
Length = 521
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP----------------- 43
L +LK LDL HN+L +LP I +R+L EL+LS+N LT LP
Sbjct: 70 LQNLKLLDLGHNQLT--ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127
Query: 44 -------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+NL L L FN + + + L L LNL + K++ + +G L
Sbjct: 128 KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLR 186
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NL LDLS N LT +P E+ L +L+ L L + T+ +I Q
Sbjct: 187 NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQ 230
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP + + +L LNL+ +LT LP +NL L L FN
Sbjct: 185 LRNLQELDLSFNSLTT--LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L N+++ + +G L NL LDL+ N+LT +P E+ L
Sbjct: 243 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 302 NLQELDLHRNQLTTLPKEIGQ 322
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP + + +L LNL+ +LT LP +NL L L FN
Sbjct: 139 LRNLQELDLSFNSLTT--LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L LNL + K++ + +G L NL LDLS N LT +P E+ L
Sbjct: 197 SLTTLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLE 255
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 256 NLQRLDLHQNRLATLPMEIGQ 276
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 300 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 357
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 358 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 416
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 417 NLQELCLDENQLTTLPKEIEQ 437
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 208 LENLQRLNLNSQKLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 266 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 325 NLKTLNLIVTQLTTLPKEI 343
>gi|320165521|gb|EFW42420.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 607
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L L N++ S F + +L +L+L NQ T +P T LT L L N
Sbjct: 116 LTALNFLSLGGNQITSIPDNAFTSLTALKQLHLYVNQFTNIPENTFTGLTELTDLTLYGN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
++ + F LT L L L NN+I+ VS+N+ L L L L N++T +P + +
Sbjct: 176 QLTEISATTFAGLTSLMYLALSNNQITSVSANLFAGLTALTHLFLHGNQITSIPADAFTG 235
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L L LFL GNP T+ +
Sbjct: 236 LTELTHLFLDGNPFTTLPPGLF 257
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L LS+N++ S S LF + +LT L L NQ+T +P T LTHL L N
Sbjct: 188 LTSLMYLALSNNQITSVSANLFAGLTALTHLFLHGNQITSIPADAFTGLTELTHLFLDGN 247
Query: 60 KINNMENDYFLTL 72
+ F+ L
Sbjct: 248 PFTTLPPGLFMGL 260
>gi|449280922|gb|EMC88147.1| Leucine-rich repeat-containing G-protein coupled receptor 4,
partial [Columba livia]
Length = 697
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L++L L+ K+ S + L + + L L+LSYN + LP C +L + L N+I+ +
Sbjct: 68 LESLTLTGTKINSVPVNLCQEQKVLRTLDLSYNNIKDLPSFKGCHSLEEISLQHNQIHEI 127
Query: 65 ENDYFLTLTKLSLLNLKNNKI----SEVSSNVGDLINLAILDLSDNELTDVPCE-LSSLF 119
D F L+ L +L+L N+I E S V LIN LDLS N+LT VP E LS L
Sbjct: 128 AEDTFQGLSSLRILDLSRNRIHQIHKEAFSTVAALIN---LDLSFNDLTSVPTEGLSGLN 184
Query: 120 HLKSLFLGGN 129
LK L GN
Sbjct: 185 QLK---LAGN 191
>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 595
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQ 253
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 93 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 145 LGLYKNKLTTFPKEIGQ 161
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|296088271|emb|CBI36497.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK-INNMENDYFLTLTKLSLLN 79
P F+ ++ ++L N++ L C NL+ LLL N + + N +F + L +L+
Sbjct: 209 PDFVKWTTIERISLMDNRIEKLTGSPTCPNLSTLLLDLNSDLQMISNGFFQFIPNLRVLS 268
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
L N KI E+ S++ +L++L LDLS E+ +P E+ +L LK+L L
Sbjct: 269 LSNTKIVELPSDISNLVSLQYLDLSGTEIKKLPIEMKNLVQLKTLIL 315
>gi|260834119|ref|XP_002612059.1| hypothetical protein BRAFLDRAFT_227746 [Branchiostoma floridae]
gi|229297432|gb|EEN68068.1| hypothetical protein BRAFLDRAFT_227746 [Branchiostoma floridae]
Length = 260
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS LK L LSHNK+++ F ++ SL L+L +N +T++P T+ L L L FN
Sbjct: 105 LSRLKELYLSHNKIIAIKPATFSNLPSLEMLSLRHNHITVIPSGAFTNLPRLFSLHLQFN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCE-LSS 117
+I +++ F L L L L+ N+I+++ + +L L LDL+ N++T++ + S+
Sbjct: 165 RITELKSGTFSNLPHLQQLWLQTNQITKMGPAAFSNLPQLKALDLASNQITNIQADTFSN 224
Query: 118 LFHLKSLFLGGNPIKTV 134
L +L+ L+L N + ++
Sbjct: 225 LPNLRFLYLCSNQMSSL 241
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
F + L ELNL NQLT + CT K N+ L L N I + F L++L L L
Sbjct: 54 FSNTFRLKELNLGSNQLTHIQPCTFSKLQNIRFLRLSHNHITVIHTGTFSYLSRLKELYL 113
Query: 81 KNNKISEV-SSNVGDLINLAILDLSDNELTDVPC-ELSSLFHLKSLFLGGNPIKTVRNDI 138
+NKI + + +L +L +L L N +T +P ++L L SL L N I +++
Sbjct: 114 SHNKIIAIKPATFSNLPSLEMLSLRHNHITVIPSGAFTNLPRLFSLHLQFNRITELKSGT 173
Query: 139 LQD 141
+
Sbjct: 174 FSN 176
>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
valvarum F0432]
gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
valvarum F0432]
Length = 412
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
LS+L+ L L N+LV LP+ I + +L EL+L +NQLT+LP NL L L N
Sbjct: 115 LSNLQKLSLGDNQLVI--LPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLREN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + L L L+L +N+++ + + +G L NL L L +++LT +P E+ L
Sbjct: 173 KLTTLPAGIG-QLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLG 231
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L+ L+L G+ + + N I Q +S++++ +D H
Sbjct: 232 NLQKLYLLGHQLAALPNSIGQ-----LSNLQSITIDSH 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L++L+ LDL+ N+L ++LP I + +L +L+L NQL +LPV NL L L N
Sbjct: 92 LNNLQKLDLTGNQL--NTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHN 149
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +LNL+ NK++ + + +G L NL L L N LT +P E+ L
Sbjct: 150 QLTVLPATIG-QLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLH 208
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L + + T+ +I Q
Sbjct: 209 NLQELILCEDQLTTLPVEIGQ 229
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHL-LLGF 58
L +L+ L L N+L + LP I + +L EL L +QLT LPV NL L LLG
Sbjct: 184 LGNLQKLSLGSNRLTT--LPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGH 241
Query: 59 ------NKINNMEN---------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
N I + N D L KL L+L+N ++ + + +G L N
Sbjct: 242 QLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRN--LTTLPTKIGQLSN 299
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L LDLSDN++T +P + L +L+ L L GN + + + I Q
Sbjct: 300 LQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQ 342
>gi|284010631|dbj|BAI66795.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 273
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
LS L L L NKL + +F +++L L LS NQL LP+ NL L L N
Sbjct: 63 LSKLTLLSLQGNKLQALPAGVFDQLKNLETLWLSENQLQSLPIGVFDQLVNLAELRLYRN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
++ ++ F LTKL++L L NNK+ + V D L L L L++N+L VP E S
Sbjct: 123 QLTSLPPGIFDKLTKLTILWLDNNKLQSLPDGVFDKLTLLEKLYLNNNQLKSVPEEAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L LK L L NP NDIL SK I
Sbjct: 183 LEKLKMLQLQENPWDCSCNDILYLSKWI 210
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
SY +LT +P + D K L L +NK++++ N F L+KL+LL+L+ NK+ + + V
Sbjct: 27 SYKKLTAIPSNIPADTKKLE---LDYNKLSSLPNMAFHGLSKLTLLSLQGNKLQALPAGV 83
Query: 93 GD-LINLAILDLSDNELTDVP 112
D L NL L LS+N+L +P
Sbjct: 84 FDQLKNLETLWLSENQLQSLP 104
>gi|78100552|gb|ABB21098.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 371
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL + N+L + +F + L EL LS NQL LP V LT+L LG+N
Sbjct: 106 LKNLETLWIQQNQLQALPAGVFDQLVELDELYLSKNQLKSLPPRVFDSLTKLTYLSLGYN 165
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ + + F LT L L L NN++ + V D L L L++ +N+L VP
Sbjct: 166 ELQRLPDGVFDKLTLLEKLYLYNNQLQSLPKGVFDKLTELKTLEMRNNQLRRVPEGAFDY 225
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L +L + L NP NDIL SK I K + + + GG + E T E
Sbjct: 226 LSNLSLVSLNDNPWDCSCNDILYLSK-WIREKKGTVSNIEAAGCEEGGKAVLEITEE 281
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMEND 67
L++NKL F +++ LT LNL NQL LP V + KNL L + N++ +
Sbjct: 66 LNYNKLRELEPKAFHNLKELTYLNLDTNQLQTLPAGVFDELKNLETLWIQQNQLQALPAG 125
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKSLF 125
F L +L L L N++ + V D L L L L NEL +P L L+ L+
Sbjct: 126 VFDQLVELDELYLSKNQLKSLPPRVFDSLTKLTYLSLGYNELQRLPDGVFDKLTLLEKLY 185
Query: 126 LGGNPIKTVRNDIL 139
L N ++++ +
Sbjct: 186 LYNNQLQSLPKGVF 199
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 42 LPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAI 100
+PV TD L+L +NK+ +E F L +L+ LNL N++ + + V D L NL
Sbjct: 57 IPVDTD-----RLVLNYNKLRELEPKAFHNLKELTYLNLDTNQLQTLPAGVFDELKNLET 111
Query: 101 LDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
L + N+L +P + L L L+L N +K++
Sbjct: 112 LWIQQNQLQALPAGVFDQLVELDELYLSKNQLKSL 146
>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 595
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQ 253
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 93 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 145 LGLYKNKLTTFPKEIGQ 161
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|395518712|ref|XP_003763503.1| PREDICTED: nyctalopin [Sarcophilus harrisii]
Length = 611
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L L LD++ L S +F+D+ +L EL+ N +P +NLTHL L N
Sbjct: 166 FLRRLVRLDVAGCNLFSIPDRIFVDLPALQELSCFQNHFRRVPWAVRGMQNLTHLYLERN 225
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
I + + L +L L+L++N+IS V + D + L L+DN L +P
Sbjct: 226 WIEAIAYNSLQGLGRLHSLSLQDNRISVVHAGAFQDCQRMEYLYLNDNLLHSLPGSSFKG 285
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L HLK L LGGN + V D QD
Sbjct: 286 LSHLKMLNLGGNSLSQVSRDWFQD 309
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSD 105
DC+ + +L L N ++++ F L+ L +LNL N +S+VS + DL+ L +L L
Sbjct: 261 DCQRMEYLYLNDNLLHSLPGSSFKGLSHLKMLNLGGNSLSQVSRDWFQDLVELEVLYLDR 320
Query: 106 NELTDV-PCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
N + + +L L +L L N + ++ + Q + + R +HC
Sbjct: 321 NRIQSIEEGAFENLTSLMALHLNSNNLTSLPFSVFQPVY-FLGRLYLFRNPWHC 373
>gi|29841020|gb|AAP06033.1| SJCHGC02103 protein [Schistosoma japonicum]
Length = 275
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 2 LSHLKTLDLSHNKL----------------------VSDSLPLFIDMRSLTELNLSYNQL 39
L HL++L LSHNK+ + + P +++ L LNL N+L
Sbjct: 43 LDHLRSLTLSHNKITEVPQEISTLQTLEHLNLFNNCIMNISPKIVELTYLRSLNLGMNKL 102
Query: 40 TMLPVCTDC-KNLTHLLLGFNKINNME-NDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
++LP +L L L +N + D F L L L L +N + S +G L+N
Sbjct: 103 SVLPRGFGAFPSLEILDLTYNNLKETSLPDNFFNLVTLRALYLSDNDFEHIPSGIGKLVN 162
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L IL L DN+L D+P E+ L LK L L N
Sbjct: 163 LEILALRDNDLVDLPAEICLLTRLKELHLQNN 194
>gi|304269082|dbj|BAJ14993.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 222
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINNME 65
L L++N+L F + LT LNL YNQL LPV KNL L L NK+ ++
Sbjct: 45 LQLNYNQLTGIPPTAFQGLTKLTYLNLEYNQLQTLPVGVFDQLKNLNELRLSSNKLKSLP 104
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LT+L+ L L N++ + D L +L L LS+N+L VP SL ++
Sbjct: 105 PRVFDSLTRLTYLTLGTNQLQSIPKGAFDKLASLQTLYLSNNQLQSVPDGAFDSLTKVEM 164
Query: 124 LFLGGNPIKTVRNDIL 139
L L NP +DI+
Sbjct: 165 LQLHNNPWDCACSDII 180
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + + +F +++L EL LS N+L LP V LT+L LG N
Sbjct: 63 LTKLTYLNLEYNQLQTLPVGVFDQLKNLNELRLSSNKLKSLPPRVFDSLTRLTYLTLGTN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSL 118
++ ++ F L L L L NN++ V D L + +L L +N C S +
Sbjct: 123 QLQSIPKGAFDKLASLQTLYLSNNQLQSVPDGAFDSLTKVEMLQLHNNPWD---CACSDI 179
Query: 119 FHLKSLFLGGN 129
+L++ F+ N
Sbjct: 180 IYLRT-FIAKN 189
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
S +T+D S KL + +P I S +L L+YNQLT +P LT+L L +N+
Sbjct: 19 SSPETVDCSSKKLTA--VPTGIPT-STEKLQLNYNQLTGIPPTAFQGLTKLTYLNLEYNQ 75
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSL 118
+ + F L L+ L L +NK+ + V D L L L L N+L +P L
Sbjct: 76 LQTLPVGVFDQLKNLNELRLSSNKLKSLPPRVFDSLTRLTYLTLGTNQLQSIPKGAFDKL 135
Query: 119 FHLKSLFLGGNPIKTV 134
L++L+L N +++V
Sbjct: 136 ASLQTLYLSNNQLQSV 151
>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 982
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +TEL+LS N+LT LP NL L L N+++++ + LT L L L NNK
Sbjct: 406 LEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAE-IGQLTNLQSLYLFNNK 464
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+S + + +G L NL L L +N+L+ +P E+ L +L+SL+L N + ++ +I Q
Sbjct: 465 LSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQ 520
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L+TL L +NKL SLP I + +L L L NQL+ LP NL L L N
Sbjct: 682 LTNLQTLYLFNNKL--SSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNN 739
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K++++ + LT L L L NN++S + + +G L NL L L +N+L+ +P E+ L
Sbjct: 740 KLSSLPAE-IGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLT 798
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
+L+SL+L N + ++ I Q +++++T LD
Sbjct: 799 NLQSLYLDNNQLSSLPPGIGQ-----LTNLQTLYLD 829
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L++L L +NKL SLP I + +L L L N+L+ LP NL L L N
Sbjct: 613 LTNLQSLYLFNNKL--SSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNN 670
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K++++ + LT L L L NNK+S + + +G L NL L L +N+L+ +P E+ L
Sbjct: 671 KLSSLPAE-IGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLT 729
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+SL+L N + ++ +I Q
Sbjct: 730 NLQSLYLFNNKLSSLPAEIGQ 750
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L+TL L +NKL SLP I + +L L L N+L+ LP NL L L N
Sbjct: 659 LTNLQTLYLFNNKL--SSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNN 716
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + LT L L L NNK+S + + +G L NL L L +N+L+ +P E+ L
Sbjct: 717 QLSSLPAE-IGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLT 775
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+SL+L N + ++ +I Q
Sbjct: 776 NLQSLYLDNNQLSSLPAEIGQ 796
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L + LDLS NKL + LP I + +L L L NQL+ LP NL L L N
Sbjct: 406 LEEVTELDLSANKLTA--LPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNN 463
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K++++ + LT L L L NN++S + + +G L NL L L +N+L+ +P E+ L
Sbjct: 464 KLSSLPAE-IGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLT 522
Query: 120 HLKSLFL 126
+L+S +L
Sbjct: 523 NLQSFYL 529
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++L++L L +N+L SLP I + +L L L N+L+ LP NL L L N
Sbjct: 429 LTNLQSLYLDNNQL--SSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLDNN 486
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + LT L L L NNK+S + + +G L NL L + L+ +P E+ L
Sbjct: 487 QLSSLPAE-IGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLT 545
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+S +L + ++ +I Q
Sbjct: 546 NLQSFYLDNTLLSSLPAEIGQ 566
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+L +++ L+L NK++ + +G L NL L L +N+L+ +P E+ L +L+SL+L N
Sbjct: 405 SLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNK 464
Query: 131 IKTVRNDILQDSKRIISHIKTSRLD 155
+ ++ +I Q +++++T LD
Sbjct: 465 LSSLPAEIGQ-----LTNLQTLYLD 484
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L L L +N++S + + +G L NL L L +N+L+ +P E+ L +L++L+L N +
Sbjct: 590 LTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKL 649
Query: 132 KTVRNDILQ 140
++ +I Q
Sbjct: 650 SSLPAEIGQ 658
>gi|81175469|gb|ABB59072.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 355
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L L L+ NKL + +F + +L LNL+ NQL LP + LT+L L N
Sbjct: 82 LSKLTYLSLTQNKLQTLPPGVFDHLVALGTLNLNNNQLKYLPPKIFDSLTKLTYLTLNTN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLS-------DNELTDV 111
K+ ++ F L +L L+L+NN++ V V D L+NL LDLS N+L V
Sbjct: 142 KLQSLPEGVFDKLAELKTLDLQNNQLQRVPDGVFDSLLNLNTLDLSINAWKLQRNQLKRV 201
Query: 112 P-CELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQE 170
P L ++K L L NP NDIL +K + + GG + E
Sbjct: 202 PEGAFDKLQNIKDLRLEENPWDCTCNDILYMAKWLKKKQDEGLGGVDTAGCEEGGKAVLE 261
Query: 171 STSE 174
T E
Sbjct: 262 ITEE 265
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 52 THLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTD 110
T L L FN ++ + F L+KL+ L+L NK+ + V D L+ L L+L++N+L
Sbjct: 62 TELRLNFNSLSKLSPAAFHGLSKLTYLSLTQNKLQTLPPGVFDHLVALGTLNLNNNQLKY 121
Query: 111 VPCEL-SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQNVDGGGMSS 168
+P ++ SL L L L N ++++ + ++ +KT L + Q V G S
Sbjct: 122 LPPKIFDSLTKLTYLTLNTNKLQSLPEGVFDK----LAELKTLDLQNNQLQRVPDGVFDS 177
Query: 169 --QESTSEINIDKYKLDRTKTLTLCKVINIPESVY 201
+T +++I+ +KL R ++ +PE +
Sbjct: 178 LLNLNTLDLSINAWKLQRN------QLKRVPEGAF 206
>gi|425450514|ref|ZP_18830339.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 7941]
gi|389768576|emb|CCI06331.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 7941]
Length = 783
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L+ LDLS+N+ +S+ + SL L+LS NQ++ +P +L L L +N
Sbjct: 37 QLTSLQLLDLSNNQ-ISEIPEALAQLTSLQLLDLSNNQISEIPEALAQLTSLQVLYLNYN 95
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + LT L L+L N+ISE+ + L+NL L L +N +T+VP E+
Sbjct: 96 QIREIP-EALAQLTSLRSLDLSYNQISEIPEALAHLVNLKRLVLENNPITNVPPEIIRQG 154
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHI-----------KTSRLDYHCQNVDGGGMSS 168
K+ + GNP + KR ++ + KTS L N S
Sbjct: 155 WGKTTWDDGNPQAIFSYLKDKGKKRPLNELKVLLVGEGDVGKTSLLKRLLHNTFN---SE 211
Query: 169 QESTSEINIDKYKLDRTKTLTL 190
+ T INI+ +KLD+ + L
Sbjct: 212 EPKTPGINIESWKLDQKPDIRL 233
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
+ L+LS L ++ P + SL L+LS NQ++ +P +L L L N+I+ +
Sbjct: 19 RELNLSGRNL-TEIPPEIAQLTSLQLLDLSNNQISEIPEALAQLTSLQLLDLSNNQISEI 77
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ LT L +L L N+I E+ + L +L LDLS N+++++P L+ L +LK L
Sbjct: 78 P-EALAQLTSLQVLYLNYNQIREIPEALAQLTSLRSLDLSYNQISEIPEALAHLVNLKRL 136
Query: 125 FLGGNPIKTVRNDILQDS 142
L NPI V +I++
Sbjct: 137 VLENNPITNVPPEIIRQG 154
>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 595
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQ 253
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 93 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 145 LGLYKNKLTTFPKEIGQ 161
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 266 RLTAFPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 595
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQ 253
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 93 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 145 LGLYKNKLTTFPKEIGQ 161
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|15218660|ref|NP_174166.1| receptor-like protein kinase HSL1 [Arabidopsis thaliana]
gi|75337207|sp|Q9SGP2.1|HSL1_ARATH RecName: Full=Receptor-like protein kinase HSL1; AltName:
Full=Protein HAESA-LIKE1; Flags: Precursor
gi|6560764|gb|AAF16764.1|AC010155_17 F3M18.12 [Arabidopsis thaliana]
gi|20260672|gb|AAM13234.1| putative receptor protein kinase [Arabidopsis thaliana]
gi|31711782|gb|AAP68247.1| At1g28440 [Arabidopsis thaliana]
gi|110742650|dbj|BAE99237.1| hypothetical protein [Arabidopsis thaliana]
gi|224589402|gb|ACN59235.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis
thaliana]
gi|332192856|gb|AEE30977.1| receptor-like protein kinase HSL1 [Arabidopsis thaliana]
Length = 996
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFNK 60
S L+ LD+S N+ D L EL + +N + ++P DC++LT + L +N+
Sbjct: 348 SPLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLAYNR 407
Query: 61 INNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELSSL 118
+ F L ++LL L NN S E+S ++G NL++L LS+NE T +P E+ SL
Sbjct: 408 FSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNNEFTGSLPEEIGSL 467
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG---GGMSSQESTSEI 175
+L L GN L DS + + T LD H G G+ S + +E+
Sbjct: 468 DNLNQLSASGNKFSGS----LPDSLMSLGELGT--LDLHGNQFSGELTSGIKSWKKLNEL 521
Query: 176 NI 177
N+
Sbjct: 522 NL 523
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL---LLGF 58
+L+ L L +N L P ++ +L LNLSYN + + + NLT+L L
Sbjct: 155 FENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNLTNLEVMWLTE 214
Query: 59 NKINNMENDYFLTLTKLSLLNLK-NNKISEVSSNVGDLINLAILDLSDNELT-DVPCELS 116
+ D L+KL L+L N+ + + ++G L N+ ++L +N LT ++P EL
Sbjct: 215 CHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELG 274
Query: 117 SLFHLKSL 124
+L L+ L
Sbjct: 275 NLKSLRLL 282
>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
harrisii]
Length = 582
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L+KL +L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITTVEKD-IKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 25/146 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
S + +L++ HN++ +F + L++LN+ NQLT LP+
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPL------------------ 396
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
DY T T + LNL N+I+++S +V L++L +L LS+N L +P L +L L+
Sbjct: 397 ----DYG-TWTSMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLR 451
Query: 123 SLFLGGNPIKTVRNDI--LQDSKRII 146
L L N ++++ N+I L+D ++++
Sbjct: 452 ELDLEENKLESLPNEIAYLKDLQKLV 477
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
SL L LS N L LP + + L L L NK+ ++ N+ L L L L NN+++
Sbjct: 426 SLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLN 484
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRI 145
+ +G L NL L L +N L +P E+ +L +L+ L+L NP + + ++ SK
Sbjct: 485 NLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLS 544
Query: 146 ISHIKTSRLDYHCQNVDGGGMS 167
I I+ L + + GG S
Sbjct: 545 IMSIENCPLSHLPPQIVAGGPS 566
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + MLP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVG-CLVNLVTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI SK I+ I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +L L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEI 234
>gi|187608222|ref|NP_001120634.1| leucine rich repeat containing 47 [Xenopus (Silurana) tropicalis]
gi|171847334|gb|AAI61789.1| LOC100145802 protein [Xenopus (Silurana) tropicalis]
Length = 570
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L+ LD+S N+L + LP + L +N+S NQL LP + C L L L
Sbjct: 94 QLSALRLLDVSGNQL--EVLPAELCGLPELCTINVSCNQLQELPPGLERCTKLAELNLSR 151
Query: 59 NKINNMENDYFL-TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N+I + L L+ L+ +N+I E+ ++G L L LDLS+N LTD+P EL+
Sbjct: 152 NRICALPPGLLCRQLPLLASLSAADNQIQELGGDIGLLPGLKSLDLSNNLLTDIPYELAD 211
Query: 118 LFHLKSLFLGGNPIKTVR 135
LK + GN +K R
Sbjct: 212 CSKLKDINFKGNKLKDKR 229
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--------CT---DCKN 50
L HL+ L L NKL S P + +L L++S NQL +LP CT C
Sbjct: 72 LIHLQNLVLCRNKLRLLS-PAVGQLSALRLLDVSGNQLEVLPAELCGLPELCTINVSCNQ 130
Query: 51 LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV--GDLINLAILDLSDNEL 108
L L G + TKL+ LNL N+I + + L LA L +DN++
Sbjct: 131 LQELPPGLERC-----------TKLAELNLSRNRICALPPGLLCRQLPLLASLSAADNQI 179
Query: 109 TDVPCELSSLFHLKSLFLGGN 129
++ ++ L LKSL L N
Sbjct: 180 QELGGDIGLLPGLKSLDLSNN 200
>gi|78100638|gb|ABB21140.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 322
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L L++NKL F +++ LT LNL NQL LP V + KNL +L + N++ ++
Sbjct: 64 LKLNYNKLRELEPTAFHNLKELTYLNLDTNQLQTLPAGVFDELKNLENLRIQQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
+ F LTK++ L+L +NK+ + + V D L L L L++N+L VP L ++K
Sbjct: 124 SGIFDKLTKITNLDLNDNKLERLPNGVFDKLTQLGTLYLNNNQLRRVPEGAFDKLQNIKD 183
Query: 124 LFLGGNPIKTVRNDILQDSKRI 145
L L NP NDIL SK I
Sbjct: 184 LRLDTNPWDCSCNDILYLSKWI 205
>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 595
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLSDNQLATLPVEIGQ 230
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 467 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 525 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNLK N ++ + +G L NL LDL DN+L P + L L+SL L N +
Sbjct: 70 LKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 129
Query: 132 KTVRNDI 138
+ N+I
Sbjct: 130 IILPNEI 136
>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 595
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLSDNQLATLPVEIGQ 230
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 467 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 525 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNLK N ++ + +G L NL LDL DN+L P + L L+SL L N +
Sbjct: 70 LKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 129
Query: 132 KTVRNDI 138
+ N+I
Sbjct: 130 IILPNEI 136
>gi|357137806|ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Brachypodium distachyon]
Length = 586
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC----------------- 45
S L LDL NKL S +F LTELN + N LT +P
Sbjct: 160 SKLSKLDLEGNKLEMLSENMFSSWTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKI 219
Query: 46 -------TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
C +L +G N + ++ D + L+KL L+L +N++ E L L
Sbjct: 220 TLIPSSIKGCSSLAEFYMGNNLLLSIPADIGM-LSKLGTLDLHSNQLKEYPVGACKL-KL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
+ LDLS+N L+ +P EL ++ L+ L L GNP++T+R+ ++ + SRL
Sbjct: 278 SFLDLSNNTLSGLPPELGTMTTLRKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSD- 336
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDRTK-TLTLCKVINIPESVY 201
+ G G + + + L + L+ V ++P + +
Sbjct: 337 EEASGSGRTPTKDDQVAAARRLSLSSKELNLSGLGVTSVPPAAW 380
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 26/174 (14%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMR---SLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L+ L L+HN L L D+R SL LN+S+NQ+ LP D L L + FN+
Sbjct: 47 LQKLILAHNNLEV----LREDLRNLSSLVVLNISHNQIYSLPAAIGDLPLLKSLDISFNQ 102
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + + L L ++ NN ++E+ +++ +NL+ L S+N+++ +P EL+
Sbjct: 103 INTVPEEIGLA-AALVKVDFSNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSK 161
Query: 121 LKSLFLGGNPIKTVRNDI---------LQDSKRIISHIKTS--------RLDYH 157
L L L GN ++ + ++ L +K I++ I S RLD H
Sbjct: 162 LSKLDLEGNKLEMLSENMFSSWTILTELNAAKNILTTIPASIGALSKLIRLDLH 215
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+EL S N+++ +P C L+ L L NK+ + + F + T L+ LN N ++
Sbjct: 139 LSELKASNNKISRIPDELAGCSKLSKLDLEGNKLEMLSENMFSSWTILTELNAAKNILTT 198
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ +++G L L LDL N++T +P + L ++G N + ++ DI
Sbjct: 199 IPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNNLLLSIPADI 249
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL-FHLKSLFLGGNPIKTVRND 137
+L N ++ + + + L L+LSDN +T +P EL L +L+ L L GNP++++R
Sbjct: 507 DLSQNYLTTIPEGIKEFTALIELNLSDNNITALPAELGLLEPNLQVLKLDGNPLRSIRRT 566
Query: 138 IL-QDSKRIISHIK 150
+L + +K ++ ++K
Sbjct: 567 VLDRGTKAVLQYLK 580
>gi|328724223|ref|XP_003248071.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3-like, partial [Acyrthosiphon pisum]
Length = 405
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L L LSHN + + +F + SL L+LSYN++ + + T L L+L N+I+
Sbjct: 186 LAKLYLSHNMIRNIPPGIFDSLTSLGRLDLSYNKIGDIEPKLFTHLTELKTLMLKGNEIS 245
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFH 120
N++N F L+KL +L+L N+I + + V +L +L IL L +N++ + E+ L
Sbjct: 246 NLKNGVFANLSKLQILSLVRNRIENIETGVFNNLKSLEILSLEENQIHKLDLEMFKGLIK 305
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
L L LG N ++ ++ + + ++ +KT +LD E ++ IN
Sbjct: 306 LAKLDLGYNKVRDIKPKLFTN----LTELKTLKLD------------GNEISNLINGVFA 349
Query: 181 KLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEIN-IDKYKLDRTKTL 227
L + +TL+L K+ NI V+ MS + ++E N I K L+ K L
Sbjct: 350 NLSKLQTLSLVENKIENIETGVFNNLMSLESLSLEQNQIHKLDLEMFKGL 399
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L LDLS+NK+ LF + L L L N+++ L V + L L L N
Sbjct: 207 LTSLGRLDLSYNKIGDIEPKLFTHLTELKTLMLKGNEISNLKNGVFANLSKLQILSLVRN 266
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSS 117
+I N+E F L L +L+L+ N+I ++ + LI LA LDL N++ D+ P ++
Sbjct: 267 RIENIETGVFNNLKSLEILSLEENQIHKLDLEMFKGLIKLAKLDLGYNKVRDIKPKLFTN 326
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKT-SRLDYHCQNVDGGGMSSQESTSEIN 176
L LK+L L GN I + N + + +S ++T S ++ +N++ G ++ S ++
Sbjct: 327 LTELKTLKLDGNEISNLINGVFAN----LSKLQTLSLVENKIENIETGVFNNLMSLESLS 382
Query: 177 IDK---YKLD 183
+++ +KLD
Sbjct: 383 LEQNQIHKLD 392
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ LKTL L N++ + F ++ L +NL+ N + + V + +L L L N
Sbjct: 111 LTELKTLILDLNEISNLKNGAFANLSKLRRINLNGNIIENIETGVFNNLTSLEILSLEEN 170
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDV-PCELSS 117
+I+ ++ + F KL+ L L +N I + + D L +L LDLS N++ D+ P +
Sbjct: 171 QIHKLDLEMFKGPIKLAKLYLSHNMIRNIPPGIFDSLTSLGRLDLSYNKIGDIEPKLFTH 230
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD-SK-RIISHIKTSRLDYHCQNVDGGGMSSQESTSEI 175
L LK+L L GN I ++N + + SK +I+S ++ +N++ G ++ +S +
Sbjct: 231 LTELKTLMLKGNEISNLKNGVFANLSKLQILSLVRN-----RIENIETGVFNNLKSLEIL 285
Query: 176 NIDK---YKLD 183
++++ +KLD
Sbjct: 286 SLEENQIHKLD 296
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL------LLGFNKI 61
LDLS N++ F + L L+ S N++ + + K+ THL +L N+I
Sbjct: 69 LDLSFNEIKDIEPKSFTHLTDLKYLDYSMNKIRDI----EPKSFTHLTELKTLILDLNEI 124
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLF 119
+N++N F L+KL +NL N I + + V +L +L IL L +N++ + E+
Sbjct: 125 SNLKNGAFANLSKLRRINLNGNIIENIETGVFNNLTSLEILSLEENQIHKLDLEMFKGPI 184
Query: 120 HLKSLFLGGNPIKTV 134
L L+L N I+ +
Sbjct: 185 KLAKLYLSHNMIRNI 199
>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
Length = 278
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 17 SDSLPLFIDMRSL--TELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLT 73
+D+L L + SL T L+L N+L+ +P C LT L+L N++ + ++ LT
Sbjct: 4 ADALKLILRAESLGSTSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSE-LAKLT 62
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
KLS L+L +N+++++ + V L L +LDL N LT +P E L L L L GN ++
Sbjct: 63 KLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRR 122
Query: 134 VRNDI 138
+ +I
Sbjct: 123 LPAEI 127
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 29 LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L+EL+LS NQLT LP V T LT L L N++ + + F LTKL LNL+ N++
Sbjct: 64 LSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAE-FGQLTKLIRLNLQGNQLRR 122
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + +G L L L+L N+L +P E+ L + L+L N ++++ +I
Sbjct: 123 LPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEI 173
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L N+L LP I + L ELNL +N+L LP + L L N
Sbjct: 107 LTKLIRLNLQGNQL--RRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQN 164
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + L LNL NN+++ + +G L L L+L+ N LT +P E+ L
Sbjct: 165 RLRSLPPEIG-KMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLT 223
Query: 120 HLKSLFLGGNPIK 132
L +L L NP++
Sbjct: 224 RLGTLDLSHNPLE 236
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LG 57
L+ L LDLS N+L LP + + LT L+L N+LT LP + LT L+ L
Sbjct: 61 LTKLSELDLSSNQLTQ--LPAVVTRLHGLTVLDLHSNRLTQLPA--EFGQLTKLIRLNLQ 116
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL---------------------- 95
N++ + + LTKL LNL +NK+ + +G L
Sbjct: 117 GNQLRRLPAEIG-KLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGK 175
Query: 96 -INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+ L L+L +NELT +P E+ L L L L N + T+ +I Q ++
Sbjct: 176 MVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTR 224
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L L+L HNKL ++LP I + ++ +L L N+L LP L L L N
Sbjct: 130 LTKLMELNLHHNKL--EALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L +L LNL N+++ + +G L L LDLS N L +P +LS L
Sbjct: 188 ELTSLPPEIG-KLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDLSHNPLEHLPPQLSQLS 246
Query: 120 HLKSLFLGG 128
L+ + G
Sbjct: 247 GLRQILADG 255
>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
[Acaryochloris marina MBIC11017]
Length = 659
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+HLK L+LS +L ++ P + ++ L L+ S NQL+ LP+ T +L L L FN+
Sbjct: 382 LTHLKKLNLSKTQL-TNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQ 440
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + D L L L+L+ NK+ + +G L NL L L N+L +P ++ L +
Sbjct: 441 LSKLPADIG-QLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKN 499
Query: 121 LKSLFLGGNPIKTVRNDI 138
LKSL + GN + ++ +I
Sbjct: 500 LKSLSIHGNTLSSLPPEI 517
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
L+ L+ LDL N+L S P I + +L L L +N L+ LP NL L L
Sbjct: 175 LNKLRRLDLFRNQL-SGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATS 233
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L LTKL L+L +NK+S + + L+NL L L +L+ P ELS L H
Sbjct: 234 LKRLPPE-ILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTH 292
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L GN + ++ ++
Sbjct: 293 LQELDLSGNSLSSLPREM 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS LK+L L N+L SLP I + +L LNL NQL+ LP+ +NL L L N
Sbjct: 520 LSSLKSLILRSNRL--SSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNN 577
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L++L +N++S + +G L NL +L L N+L+++P E+ L+
Sbjct: 578 RLRNLPLEMG-QLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQLW 636
Query: 120 HLKSLFLGGNPIKT 133
+ + GNP+ +
Sbjct: 637 PSTKITVEGNPLPS 650
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
HL TLDL N+L + LP + + +L++L L +NQL+ LP+ K+L L L N++
Sbjct: 85 HLTTLDLCSNRL--NRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQL 142
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ + L +L L+L NN + + + L L LDL N+L+ +P E+ L +L
Sbjct: 143 TNLPSSVT-QLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNL 201
Query: 122 KSLFLGGN 129
++L LG N
Sbjct: 202 QTLGLGHN 209
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL------- 54
L+ L+ LDLS NKL S P + +L L L + QL+ P + LTHL
Sbjct: 244 LTKLQELDLSDNKLSSLP-PEIAQLVNLQSLRLKFTQLSHPPA--ELSQLTHLQELDLSG 300
Query: 55 -------------------LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDL 95
L +N + N+ LT L L+L++ +++ + + L
Sbjct: 301 NSLSSLPREMAKLKKLQKLDLSYNSLRNLPT-VITQLTTLRSLDLRSTQLNSLPPEIAQL 359
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
INL LDL DN LT +P E+ +L HLK L L
Sbjct: 360 INLQSLDLYDNPLTHLPQEIGTLTHLKKLNLS 391
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L HL+ L+L N+L S P + LT L+L N+L LP T L+ L L FN+
Sbjct: 60 LKHLEVLNLRDNQL-SRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQ 118
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++++ + L L L+L N+++ + S+V L L LDLS+N L +P E++ L
Sbjct: 119 LSHLPMEMA-QLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNK 177
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + + +I++
Sbjct: 178 LRRLDLFRNQLSGLPPEIIK 197
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 20 LPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSL 77
LPL I ++ L LNL NQL+ LP +LT L L N++N + + LT LS
Sbjct: 53 LPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVT-QLTTLSK 111
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L L N++S + + L +L LDL+ N+LT++P ++ L L++L L N +K++ +
Sbjct: 112 LALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPE 171
Query: 138 ILQDSK 143
I Q +K
Sbjct: 172 IAQLNK 177
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFI-DMRSLTELNLSYNQL 39
L+HL+ LDLS N L S +LP I + +L L+L QL
Sbjct: 290 LTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQL 349
Query: 40 TMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
LP NL L L N + ++ + TLT L LNL +++ + + L L
Sbjct: 350 NSLPPEIAQLINLQSLDLYDNPLTHLPQEIG-TLTHLKKLNLSKTQLTNLPPAIMKLKRL 408
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LD S N+L+ +P E++ + LK L L N + + DI Q
Sbjct: 409 QSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQ 450
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T+ S L+L+ ++++ +G L +L +L+L DN+L+ +P E+ L HL +L L N +
Sbjct: 38 TQASQLDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLN 97
Query: 133 TVRNDILQ 140
+ ++ Q
Sbjct: 98 RLPAEVTQ 105
>gi|417765301|ref|ZP_12413265.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352483|gb|EJP04668.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 288
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L L+L YNQ +P KNL L L N
Sbjct: 72 LKNLQMLDLCYNQF--KTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N+++ + +G L NL +L+LS N+L P E+ L
Sbjct: 130 QLTTLPKEIG-KLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLE 188
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L+ L LG N +KT+ I Q + +++T L+Y+
Sbjct: 189 NLQVLNLGSNRLKTLPKGIEQ-----LKNLQTLYLNYN 221
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I +++L LNLS NQLT LP +NL L L N
Sbjct: 95 LKNLQMLDLCYNQF--KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ +G L NL +L+L N L +P + L
Sbjct: 153 QLTTLPKEIG-KLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLK 211
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L+L N + T+ +I
Sbjct: 212 NLQTLYLNYNQLTTLPREI 230
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I + +L LNLS NQLT LP +NL L L N
Sbjct: 118 LKNLQVLNLSSNQLTT--LPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L +LNL +N++ + + L NL L L+ N+LT +P E+ L
Sbjct: 176 QLITFPKEIG-KLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ 234
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N I T+ ++I+Q
Sbjct: 235 SLTELHLQHNQIATLPDEIIQ 255
>gi|304269080|dbj|BAJ14992.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 223
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYN-QLTMLPVCT--DCKNLTHLLLGFNKINNM 64
L L HN+L S F + +LT L ++ N QL LPV KNL L L N++ ++
Sbjct: 45 LQLDHNQLASIDAKAFWGLSNLTHLTITSNPQLQSLPVGVFDQLKNLNELRLSSNQLKSL 104
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLK 122
F +LTKL+ L L N++ + + D L NL L L N+L VP SL L+
Sbjct: 105 PPRVFDSLTKLTELQLHTNQLQSIPAGAFDKLTNLKTLYLQQNKLQSVPDGAFDSLASLQ 164
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG-GGMSSQE------STSEI 175
+L L NP +DI+ +++T + +N D GM S + + ++
Sbjct: 165 TLNLHANPWDCACSDII--------YLRT----FIAKNTDKIAGMESAQCNGTSTAVKDV 212
Query: 176 NIDKYK 181
N +KYK
Sbjct: 213 NTEKYK 218
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGF 58
L +L L LS N+L S +F + LTEL L NQL +P K NL L L
Sbjct: 87 QLKNLNELRLSSNQLKSLPPRVFDSLTKLTELQLHTNQLQSIPAGAFDKLTNLKTLYLQQ 146
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
NK+ ++ + F +L L LNL N S++
Sbjct: 147 NKLQSVPDGAFDSLASLQTLNLHANPWDCACSDI 180
>gi|301615307|ref|XP_002937114.1| PREDICTED: keratocan-like [Xenopus (Silurana) tropicalis]
Length = 379
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL S +F ++SL +LNL+ N L +P N L L N
Sbjct: 193 LGNLTLLDLHHNKLTDSSFQADVFNGLKSLMQLNLAKNSLKKMPPGLPL-NTVQLYLDNN 251
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISE--VSSNVGDLINLAILDLSDNELTDVPCELSS 117
I + +YF + +++ + L NK+S+ V NV ++ +L L LS NELT VP
Sbjct: 252 NIEEIPKNYFNNIPRITFIRLNYNKLSDTGVPVNVFNVTSLLDLQLSYNELTAVPIVNG- 310
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
HL+ L L N IK + +IL
Sbjct: 311 --HLERLHLDHNKIKNINGNIL 330
>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 595
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 233 NLQELYLRNNRLTVLPKEIGQ 253
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 421 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 92
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 93 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 145 LGLYKNKLTTFPKEIGQ 161
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|326669846|ref|XP_003199095.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
4-like, partial [Danio rerio]
Length = 514
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL F +R L L++ N L +P V DC+NL L LG+N
Sbjct: 128 IPNLRNLDLSYNKLQILQPNQFQGLRKLLSLHIRSNSLKTVPMRVFQDCRNLEFLDLGYN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ S+ L NL L L N + + ++
Sbjct: 188 RLRSLTRNAFAGLLKLTELHLEHNQFSKINFSHFPRLNNLRALYLQWNRIKSITQGITWT 247
Query: 119 F-HLKSLFLGGNPIKTVRNDILQ 140
+ L+ L L GN ++ + + I Q
Sbjct: 248 WTSLQKLDLSGNDLQVLDSSIFQ 270
>gi|410913015|ref|XP_003969984.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
G-protein coupled receptor 4-like [Takifugu rubripes]
Length = 977
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L++L L N + + F ++ L L L N LT +PV + NL L L N
Sbjct: 128 LHSLQSLRLDANHISAVPDDSFEGLQQLRHLWLDDNNLTKVPVGSLRHQANLQALTLALN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
+I + ++ F L+ L +L+L NN+I E+ N L NL LDL+ N LT P + +L
Sbjct: 188 RIFYIPDNAFANLSSLVVLHLHNNRIKEIGDNCFAGLSNLETLDLNFNSLTAFPRAVQAL 247
Query: 119 FHLKSLFLGGNPIKTV 134
LK L N I ++
Sbjct: 248 PKLKELGFHSNDITSI 263
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
++L++L LS K+ S L D++ L L+LSYN++T +P C L + N+I
Sbjct: 319 NNLESLTLSGTKISSIPADLCKDLKLLRTLDLSYNKITEIPTLQGCVRLQEINFQHNRIG 378
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVG-DLINLAILDLSDNELTDVPCELSSLFHL 121
++ D F L+ L LL+L N+I + + L L+ LDLS N L +P + L L
Sbjct: 379 QIDRDTFQGLSALRLLDLSRNEIRVIHRDAFLSLSALSNLDLSANSLALIPT--TGLSSL 436
Query: 122 KSLFLGGNP-IKTVRN 136
L L GNP IK V N
Sbjct: 437 SQLKLSGNPQIKNVLN 452
>gi|418738193|ref|ZP_13294589.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410746367|gb|EKQ99274.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 142
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 29 LTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
+ EL+L NQLT LP+ KNL L L N+I + N+ L++L LNL N+++
Sbjct: 1 MQELHLDGNQLTTLPMEIGRLKNLQKLYLNENQITILPNEVG-NLSELEELNLSGNRLTN 59
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+ +G L L LDLS+N+LT +P E+ L +L+ L L GN
Sbjct: 60 LPKEIGQLQKLRSLDLSNNQLTTLPKEIGHLKNLRRLVLKGN 101
>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 427
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L++L L +N+L + LP I ++ L L LSYNQ+ LP + + L L L N
Sbjct: 164 LQKLQSLYLPNNQLTT--LPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L KL L L NN+++ + +G L NL +L L++N+LT +P E+ L
Sbjct: 222 QLTTLPQE-IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 280
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 281 NLQDLYLVSNQLTTIPKEIGQ 301
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L+ LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 72 LKNLQMLDLRSNQLII--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL N+I + + L L L L +N+LT +P E+ L
Sbjct: 130 QLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ 188
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N IKT+ +I
Sbjct: 189 KLQWLYLSYNQIKTLPQEI 207
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ LDLS KL +LP I +++L L+LS NQL +LP KNL L L N++
Sbjct: 29 VRVLDLSEQKL--KALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLI 86
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L+L++N+++ + +G L NL L LS+N+LT P E+ L L+
Sbjct: 87 ILPKE-IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQ 145
Query: 123 SLFLGGNPIKTVRNDI 138
L L N IKT+ +I
Sbjct: 146 WLNLSANQIKTIPKEI 161
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N+L + +P I +++L +L L NQLT +P +NL L LG N
Sbjct: 256 LQNLKVLFLNNNQLTT--IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNN 313
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 314 QLTILPKEIG-KLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 373 NLQELYLSNNQLITIPKEIGQ 393
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++L L +N+L + LP I +++L L L+ NQLT +P +NL L L N
Sbjct: 233 LQKLESLGLDNNQLTT--LPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS+N+LT +P E+ L
Sbjct: 291 QLTTIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 349
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 350 NLQELYLSNNQLTTIPKEIGQ 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + +P I +++L L+L NQLT+LP +NL L L N
Sbjct: 279 LQNLQDLYLVSNQLTT--IPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN 336
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L LS+N+L +P E+ L
Sbjct: 337 QLTTIPKEIG-QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 395
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 396 NLQTLYLRNN 405
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+L+L K+ + +G L NL +LDLSDN+L +P E+ L +L+ L L N + +
Sbjct: 31 VLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPK 90
Query: 137 DILQ 140
+I Q
Sbjct: 91 EIRQ 94
>gi|418668205|ref|ZP_13229608.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756062|gb|EKR17689.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 329
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 28/130 (21%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L LP I+ +++L ELNL YNQLT+LP KNL L LG+N
Sbjct: 204 LKNLQLLDLSYNQLTV--LPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYN 261
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + +G L NL +L L++N+LT +P ++ L
Sbjct: 262 QL------------------------TVLPKEIGQLQNLKVLFLNNNQLTTLPKKIGQLK 297
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 298 NLQELYLNNN 307
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL L +N++ LP I +++L L LS NQLT LP KNL L LG N
Sbjct: 112 LKNLQTLYLGNNQITI--LPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L LL L +N+++ + + L NL +LDLS N+LT +P E+ L
Sbjct: 170 RLTTFPKE-IEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVLPKEIEQLK 228
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
+L+ L LG N + + +I Q + +++T L Y+
Sbjct: 229 NLQELNLGYNQLTVLPKEIEQ-----LKNLQTLYLGYN 261
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+LS KL + LP I +++L ELNL NQ+T+LP +NL L L +N++
Sbjct: 46 VRILNLSEQKLTT--LPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQLT 103
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L L NN+I+ + + L NL +L LS+N+LT +P E+ L +L+
Sbjct: 104 ILPKE-IEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQ 162
Query: 123 SLFLGGNPIKTVRNDILQ 140
+L+LG N + T +I Q
Sbjct: 163 TLYLGNNRLTTFPKEIEQ 180
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL L +N+L + P I+ +++L L L NQLT+LP KNL L L +N
Sbjct: 158 LKNLQTLYLGNNRLTT--FPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ + + L NL L L N+LT +P E+ L
Sbjct: 216 QLTVLPKE-IEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQ 274
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK LFL N + T+ I Q
Sbjct: 275 NLKVLFLNNNQLTTLPKKIGQ 295
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L LS+N+L + LP I+ +++L L L N+LT P KNL L L N
Sbjct: 135 LQNLKVLFLSNNQLTT--LPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL+L N+++ + + L NL L+L N+LT +P E+ L
Sbjct: 193 QLTVLPQE-IKQLKNLQLLDLSYNQLTVLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLK 251
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L+LG N + + +I Q
Sbjct: 252 NLQTLYLGYNQLTVLPKEIGQ 272
>gi|300778416|ref|ZP_07088274.1| leucine-rich repeat-containing protein [Chryseobacterium gleum ATCC
35910]
gi|300503926|gb|EFK35066.1| leucine-rich repeat-containing protein [Chryseobacterium gleum ATCC
35910]
Length = 299
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 27/160 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +LK + N L ++ P +++ +L E+NL NQ++ + D KNL L L N
Sbjct: 130 LQNLKVVHFDANSL--NTFPEALMEIPALEEINLQGNQISFIADKLDQIKNLKFLNLSDN 187
Query: 60 KINNM------ENDYFLTLTK---------------LSLLNLKNNKISEVSSNVGDLINL 98
+IN++ EN +L L + L LN+ N I+E+S V L N+
Sbjct: 188 QINDLGNLSFPENLKYLELQQNAIIKLPENLFKAKNLEFLNVSGNHITEISPKVKGLKNI 247
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK--TVRN 136
++L++N L D+P E+ L +LK+L L GNPI+ TV N
Sbjct: 248 VSMNLANNNLKDIPVEIKQLKNLKTLILTGNPIEKSTVEN 287
>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
Length = 462
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDLS N L +LP + + +L +L+L N L LP C N+ HL L
Sbjct: 160 LTQLEWLDLSSNPL--QTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHC 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + + LT+L L+L++N + + + VG L N+ L+LSD +L +P E+ L
Sbjct: 218 QLRTLPFEVW-KLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLT 276
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L NP++T+ ++
Sbjct: 277 QLEKLDLCSNPLQTLPAEV 295
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+++K L+LSH +L +LP + + L L+LS N L LP N+ HL L
Sbjct: 45 LTNVKHLNLSHCQL--RTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHC 102
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + + LT+L L+L +N + + + VG L N+ LDLS +L +P E+ L
Sbjct: 103 QLHTLPLEVW-KLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLT 161
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L NP++T+ ++
Sbjct: 162 QLEWLDLSSNPLQTLPAEV 180
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ L +L+L N L LP C N+ HL L ++ + + + LT+L L+L +N
Sbjct: 275 LTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVW-KLTQLEWLSLSSNP 333
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKR 144
+ + + VG L N+ L+LSD +L +P E+ L L+ L L NP++T+ ++ Q +
Sbjct: 334 LQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTN- 392
Query: 145 IISHIKTSRLDYHCQNVDGGGMSSQE 170
+ H+ S+ H + G ++ E
Sbjct: 393 -VKHLDLSQCLLHTLPPEVGRLTQLE 417
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
+K LDLS +L +LP + + L L+LS N L LP N+ HL L ++
Sbjct: 2 IKHLDLSDCQL--HTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLR 59
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + LT+L L+L +N + + + VG L N+ LDLS +L +P E+ L L+
Sbjct: 60 TLPPEVG-RLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLE 118
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L NP++T+ ++ Q
Sbjct: 119 WLDLSSNPLQTLPAEVGQ 136
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ LDLS N L +LP + + ++ L+LS+ QL LP+ L L L N
Sbjct: 68 LTQLEWLDLSSNPL--QTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + LT + L+L ++ + S VG L L LDLS N L +P E+ L
Sbjct: 126 PLQTLPAEVG-QLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLT 184
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L NP++T+ ++
Sbjct: 185 NLEKLDLCSNPLQTLPAEV 203
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+++K LDLSH +L +LP + + L L+LS N L LP N+ L L +
Sbjct: 299 TNVKHLDLSHCQL--RTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQ 356
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + + LT+L L+L +N + + + VG L N+ LDLS L +P E+ L
Sbjct: 357 LHTLPPEVG-KLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQ 415
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
L+ L L NP+ + ++ Q + + H+ S HCQ
Sbjct: 416 LEWLDLRSNPLHALPAEVGQLTN--VKHLDLS----HCQ 448
>gi|405959993|gb|EKC25954.1| Leucine-rich repeat serine/threonine-protein kinase 2 [Crassostrea
gigas]
Length = 2228
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 2 LSHLKTLDLSHNKLVSD---SLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKN--LTHLL 55
LS L L L +N + + SLP FI D+ +L ++L N+LT LP K+ L +L
Sbjct: 1118 LSRLARLKLRNNNITGNDLLSLPKFILDLPTLKFIDLCSNKLTGLPSPPSWKSTMLKEVL 1177
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
+ N+IN + + + +KL L+L NN ++E+ ++G L +L LD+S N LT +P EL
Sbjct: 1178 VSRNQINKINLEGGKSWSKLESLHLSNNGLTELPGDIGLLSSLTSLDVSHNPLTTLPDEL 1237
Query: 116 SSLFHLKSLFLGG 128
+ LGG
Sbjct: 1238 GKCHKMWEFPLGG 1250
>gi|304269056|dbj|BAJ14980.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 246
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+LS+NKL S + +F + +L +L L+ NQL LP V LT L L +N
Sbjct: 63 LTRLTYLELSNNKLQSLPVGVFDQLENLQDLRLTTNQLKSLPPRVFDSLTQLTLLNLDYN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
++ ++ F TLT L L L +++ + + L +L L LS+N+L VP S
Sbjct: 123 QLQSIPEGIFKTLTNLQTLYLSTHQLQSIPEGIFNKLASLQTLYLSNNQLQSVPDGAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDIL 139
L +L++L+L NP +DI+
Sbjct: 183 LVNLETLYLDPNPWDCACSDII 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINNME 65
L+L +N+L + + F + LT L LS N+L LPV +NL L L N++ ++
Sbjct: 45 LELQYNQLANITAKAFHGLTRLTYLELSNNKLQSLPVGVFDQLENLQDLRLTTNQLKSLP 104
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHLKS 123
F +LT+L+LLNL N++ + + L NL L LS ++L +P + + L L++
Sbjct: 105 PRVFDSLTQLTLLNLDYNQLQSIPEGIFKTLTNLQTLYLSTHQLQSIPEGIFNKLASLQT 164
Query: 124 LFLGGNPIKTV 134
L+L N +++V
Sbjct: 165 LYLSNNQLQSV 175
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 40 TMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINL 98
T +P T+ L L +N++ N+ F LT+L+ L L NNK+ + V D L NL
Sbjct: 36 TGIPASTE-----RLELQYNQLANITAKAFHGLTRLTYLELSNNKLQSLPVGVFDQLENL 90
Query: 99 AILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L L+ N+L +P + SL L L L N ++++ I + +++++T L H
Sbjct: 91 QDLRLTTNQLKSLPPRVFDSLTQLTLLNLDYNQLQSIPEGIF----KTLTNLQTLYLSTH 146
>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 590
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 111 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 168
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L+NN+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 169 RLTALPKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 227
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + + +I Q
Sbjct: 228 NLQELYLRNNRLTVLPKEIGQ 248
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 88 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 146
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL +N+ T +P E+ L +
Sbjct: 147 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQN 205
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 206 LQTLNLQDNQLATLPVEIGQ 225
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L L+L N L + P K L L L N
Sbjct: 416 LRNLEALNLEANEL--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 473
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 474 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 532
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 533 KLQTLDLRNNQLTTLPTEIGQ 553
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 439 LRNLQRLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 496
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 497 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 555
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 556 NLQWLYLQNN 565
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ L+LS KL + LP I +++L ELNL +N LT LP +I
Sbjct: 45 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTTLP---------------KEIGQ 87
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+EN L L+L++N+++ + + +L L LDLS+N L +P E+ L +L+
Sbjct: 88 LEN--------LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 139
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N + T +I Q
Sbjct: 140 LGLYKNKLTTFPKEIGQ 156
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+LP +NL L N
Sbjct: 203 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 260
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L+L N P L
Sbjct: 261 RLTALPKEMG-QLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSLKERK 314
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 315 RIQKLFPDSN 324
>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
sapiens]
Length = 434
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 7 TLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNM 64
TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN+I +
Sbjct: 2 TLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTV 59
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
E D L+KLS+L+++ NKI ++ + +G+L NL LD++ N+L +P E+ + + +L
Sbjct: 60 EKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNL 118
Query: 125 FLGGN 129
L N
Sbjct: 119 DLQHN 123
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 233 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 290
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 291 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 349
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 350 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 409
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 410 PQIVAGGPS 418
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 207 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 266
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 267 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 325
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 326 QKLVLTNNQLTTLPRGI 342
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 178 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 237
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K
Sbjct: 238 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 290
>gi|45657382|ref|YP_001468.1| hypothetical protein LIC11507 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600621|gb|AAS70105.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 500
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 329 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 386
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 387 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 445
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 446 HNLTELYLQYNRIKTLPEEI 465
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 94 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 152
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + +G L NL I +LS N+L +P E+ +L +
Sbjct: 153 LVTLP-EGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQN 211
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 212 LRMLYLENNQLKTLPRQMEKLQD 234
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +L+L K + + +L L IL L +N +T +P E++ L +LK L+L GN + V
Sbjct: 51 VRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIV 110
Query: 135 RNDILQDSKRIISHIKTSRLDYHCQNVD 162
+I + I ++ +R+ + ++
Sbjct: 111 PKEIWELENLTILRLENNRISTLPKEIE 138
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L L L +N++ +LP I+ ++L EL+L N+L LP L L N
Sbjct: 117 LENLTILRLENNRI--STLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENN 174
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L L + NL NK++ + +G+L NL +L L +N+L +P ++ L
Sbjct: 175 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 234
Query: 121 LKSLFLGGNPI 131
L+ L L NP+
Sbjct: 235 LEVLNLLINPL 245
>gi|421087858|ref|ZP_15548693.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102791|ref|ZP_15563395.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410367905|gb|EKP23289.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429599|gb|EKP73975.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 488
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 317 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 374
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 375 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 433
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 434 HNLTELYLQYNRIKTLPEEI 453
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 82 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 140
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + +G L NL I +LS N+L +P E+ +L +
Sbjct: 141 LVTLP-EGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQN 199
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 200 LRMLYLENNQLKTLPRQMEKLQD 222
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +L+L K + + +L L IL L +N +T +P E++ L +LK L+L GN + V
Sbjct: 39 VRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIV 98
Query: 135 RNDILQDSKRIISHIKTSRLDYHCQNVD 162
+I + I ++ +R+ + ++
Sbjct: 99 PKEIWELENLTILRLENNRISTLPKEIE 126
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L L L +N++ +LP I+ ++L EL+L N+L LP L L N
Sbjct: 105 LENLTILRLENNRI--STLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENN 162
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L L + NL NK++ + +G+L NL +L L +N+L +P ++ L
Sbjct: 163 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 222
Query: 121 LKSLFLGGNPI 131
L+ L L NP+
Sbjct: 223 LEVLNLLINPL 233
>gi|418726673|ref|ZP_13285284.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960583|gb|EKO24337.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 447
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 276 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 333
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 334 NRFKIFPKEIW-KLKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 392
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 393 HNLTELYLQYNRIKTLPEEI 412
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 41 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNR 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + + +G L NL I +LS N+L +P E+ +L +
Sbjct: 100 LVTLPGEIG-ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 158
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 159 LRMLYLENNQLKTLPRQMEKLQD 181
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 64 LENLTILRLKNNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 121
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 122 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 173
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 174 RQMEKLQDLEVLNLLINPL 192
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
++L K + + +L L IL L +N +T +P E++ L +LK L+L GN + V +
Sbjct: 1 MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60
Query: 138 ILQDSKRIISHIKTSRLDYHCQNVD 162
I + I +K +R+ + ++
Sbjct: 61 IWELENLTILRLKNNRISTLPKEIE 85
>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
50505]
Length = 633
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L NKL LP I M+ L L L YN+ P V KNL HL LG N
Sbjct: 158 LKKLQRLELHDNKL--KLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + L L LNL N+ + VG+L NL IL+LS+N+L +P + L
Sbjct: 216 KLETLPVE-IVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELE 274
Query: 120 HLKSLFL 126
+L+ L+L
Sbjct: 275 NLQELYL 281
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L NKL ++LP+ + ++SL +LNL N+ + P V + +NL L L N
Sbjct: 204 LKNLQHLFLGGNKL--ETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNN 261
Query: 60 KIN----------NMENDYFL------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ N++ Y L L L +LNL NNK+ + S +G L N
Sbjct: 262 KLETLPDTIGELENLQELYLLKNRFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLEN 321
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L L L +N+L +P + L +L+ L LGGN ++T+
Sbjct: 322 LQHLLLINNKLETLPAAIGELQNLRELNLGGNKLETL 358
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP ++ +++L L+L YN+ P V KNL L+L N
Sbjct: 89 LKNLQHLGLYGNRL--RTLPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGN 146
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K + L KL L L +NK+ + +G + L L L NE P + L
Sbjct: 147 KFGLFPIE-IAELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLK 205
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ LFLGGN ++T+ +I++
Sbjct: 206 NLQHLFLGGNKLETLPVEIVK 226
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 29 LTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
L +L+LS+N L T+ P + KNL HL L N++ + ++ L L L+L+ N+
Sbjct: 69 LEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSE-VEELKNLQHLDLRYNEFES 127
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + L NL L L+ N+ P E++ L L+ L L N +K + ++I
Sbjct: 128 FPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEI 178
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L +LK L+LS+NKL LP I + +L L L N+L LP + +NL L LG N
Sbjct: 296 LENLKILNLSNNKL--KILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGGN 353
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS 89
K+ + + L LLNL+ N ISEV
Sbjct: 354 KLETLPIEIEKLAGSLRLLNLRGNNISEVG 383
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
++Y + +T++S+ I + S+VG L+ L LDLS N L +P E+ L +L+ L
Sbjct: 40 DEYPVDVTEISICR---QGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLG 96
Query: 126 LGGNPIKTVRNDI 138
L GN ++T+ +++
Sbjct: 97 LYGNRLRTLPSEV 109
>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 452
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++TLDL + KL LP I +++L L+LS+N LT+LP +NL L L FN +
Sbjct: 50 VRTLDLRYQKLTI--LPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L L+L N+++ + +G L NL LDL+ N+LT +P E+ L +L+
Sbjct: 108 TLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 167 ELDLHRNQLTTLPKEIGQ 184
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LKTL+L +L + LP I ++++L LNL NQLT LP + +NL L+L N
Sbjct: 185 LQNLKTLNLIVTQLTT--LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 242
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L+L N+++ + +G L NL LDL N+LT +P E+ L
Sbjct: 243 RITALPKEIG-QLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 302 NLQELCLDENQLTTLPKEIEQ 322
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 162 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 220 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 279 NLQRLDLHQNQLTTLPKEIGQ 299
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 70 LQNLQRLDLSFNSLTI--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 128 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 187 NLKTLNLIVTQLTTLPKEI 205
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 231 LQNLEILVLRENRITA--LPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + + L NL +LDL +N+LT +P E+ L
Sbjct: 289 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQ 368
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT LP ++L L LG N
Sbjct: 300 LQNLQELCLDENQLTT--LPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN 357
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L +L L +N+++ + +G L NL L L +N+LT P E+ L
Sbjct: 358 RLSTLPKEIG-QLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK 416
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L+ L L NP+ + ++ KRI
Sbjct: 417 NLQELHLYLNPLSS------KEKKRI 436
>gi|260788636|ref|XP_002589355.1| hypothetical protein BRAFLDRAFT_150406 [Branchiostoma floridae]
gi|229274532|gb|EEN45366.1| hypothetical protein BRAFLDRAFT_150406 [Branchiostoma floridae]
Length = 165
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
++ L+ LD+S+NKL +S+P I ++ L L+ N LT LP + LTHL + N
Sbjct: 16 ITDLEVLDVSNNKL--NSIPETIGRLQKLYRLDAYSNLLTCLPQAIGSLQKLTHLYVYSN 73
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ N+ L KL +L++K+N+++EV S V L NL +L + +N+L+ P + L
Sbjct: 74 KLPNLPPG-IEKLQKLKVLSIKDNQLTEVPSGVCSLPNLEVLSVRNNKLSTFPRGVEKLQ 132
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L++G N + V + +
Sbjct: 133 KLRELYIGDNQLTEVPSGV 151
>gi|320169490|gb|EFW46389.1| hypothetical protein CAOG_04357 [Capsaspora owczarzaki ATCC 30864]
Length = 620
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFN 59
L+ LKTL L N + S S F + +LT L+LS N +T +LP T L LLL N
Sbjct: 200 LTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHITSILPSSFTGLTALEALLLDKN 259
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
+I+N+ F LT + L L +N+I+ +S+N L L + L N++T +P +
Sbjct: 260 QISNIPASAFTGLTAMQTLYLDSNRITSISTNAFTGLTALTYMYLDSNQITRIPANAFTG 319
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L L L GNP T+ + +
Sbjct: 320 LTALTYLTLDGNPFTTLPPGLFKG 343
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ + L L+ N++ S S F + L L LS NQLT +P V L LLL N
Sbjct: 128 LTAVLELGLNRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFASVTTLLDLLLYKN 187
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDV-PCELSS 117
+I ++ F TLT L L L +N I+ +S+N + L L +L LS N +T + P +
Sbjct: 188 RITSIPTSAFTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHITSILPSSFTG 247
Query: 118 LFHLKSLFLGGNPIK----------TVRNDILQDSKRIIS 147
L L++L L N I T + DS RI S
Sbjct: 248 LTALEALLLDKNQISNIPASAFTGLTAMQTLYLDSNRITS 287
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC--TDCKNLTHLLLGFNKINN 63
+ L LS+N++ S F + +LT L L NQ+T + +D +L L + N+I +
Sbjct: 60 RALYLSNNQIASIPAYAFSGLTALTWLYLDSNQITSISASAFSDLTSLEQLRMEENQITS 119
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHL 121
+ + F LT + L L N+I+ +S+N L L L+LS+N+LT +P + +S+ L
Sbjct: 120 ISDGAFTGLTAVLELGLNRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFASVTTL 179
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L L N I ++ ++ +KT RL
Sbjct: 180 LDLLLYKNRITSIPTSAF----TTLTALKTLRL 208
>gi|297819318|ref|XP_002877542.1| hypothetical protein ARALYDRAFT_905939 [Arabidopsis lyrata subsp.
lyrata]
gi|297323380|gb|EFH53801.1| hypothetical protein ARALYDRAFT_905939 [Arabidopsis lyrata subsp.
lyrata]
Length = 994
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL--TMLPVCTDCKNLTHLLLGF 58
LS L L L N++ S +P FI + LTEL+LSYN + P +C+ L HL + +
Sbjct: 414 LSDLGLLSLYSNRM-SGEIPSFIGNFSRLTELDLSYNNFDGVVPPSLGNCRILLHLWIEY 472
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELS 116
NK+N + ++ L L++ N +S + +VG L NL L+++ N+L+ +P +L
Sbjct: 473 NKLNGTIPREIMQISSLVNLSMAGNSLSGSLPKDVGRLQNLVTLNVAHNKLSGKLPLDLG 532
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
+ F L+ L+L GN DI
Sbjct: 533 TCFSLEELYLQGNYFDGTIPDI 554
>gi|456984031|gb|EMG20193.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 526
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 355 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 412
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 413 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 471
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 472 HNLTELYLQYNRIKTLPEEI 491
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 120 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNR 178
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + +G L NL I +LS N+L +P E+ +L +
Sbjct: 179 LVTLP-EGIGELKLLEELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQN 237
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 238 LRMLYLENNQLKTLPRQMEKLQD 260
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+ + +L+L K + + +L L IL L +N +T +P E++ L +LK L+L GN +
Sbjct: 75 SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 134
Query: 133 TVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
V +I + I ++ +R+ + ++
Sbjct: 135 IVPKEIWELENLTILRLENNRISTLPKEIE 164
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L L L +N++ +LP I+ ++L EL+L N+L LP L L N
Sbjct: 143 LENLTILRLENNRI--STLPKEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENN 200
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ L L + NL NK++ + +G+L NL +L L +N+L +P ++ L
Sbjct: 201 RIKILPKEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 260
Query: 121 LKSLFLGGNPI 131
L+ L L NP+
Sbjct: 261 LEVLNLLINPL 271
>gi|418698141|ref|ZP_13259120.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410762845|gb|EKR29004.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 447
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNL-SYNQLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ + N+ +LP +NL LLL
Sbjct: 276 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 333
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 334 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 392
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 393 HNLTELYLQYNRIKTLPEEI 412
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 41 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L+NN+I + + +G L NL I +LS N+L +P E+ +L +
Sbjct: 100 LVTLPGEIGELKLLEELN-LENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 158
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 159 LRMLYLENNQLKTLPRQMEKLQD 181
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 64 LENLTILRLENNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 121
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 122 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 173
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 174 RQMEKLQDLEVLNLLINPL 192
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
++L K + + +L L IL L +N +T +P E++ L +LK L+L GN + V +
Sbjct: 1 MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60
Query: 138 ILQDSKRIISHIKTSRLDYHCQNVD 162
I + I ++ +R+ + ++
Sbjct: 61 IWELENLTILRLENNRISTLPKEIE 85
>gi|242005216|ref|XP_002423467.1| class A rhodopsin-like G-protein coupled receptor GPRrk, putative
[Pediculus humanus corporis]
gi|212506555|gb|EEB10729.1| class A rhodopsin-like G-protein coupled receptor GPRrk, putative
[Pediculus humanus corporis]
Length = 1218
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 82/140 (58%), Gaps = 11/140 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
L HL++L L N+L S +F +++SL LNL N LT + + ++ +NL LLL N
Sbjct: 100 LIHLRSLKLESNRLELISPGVFNNLKSLEALNLGNNMLTSIKGEIFSNLENLYILLLKKN 159
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
I+N+++D F+ LT L +L L +N ++EV + +L++L L LS+N++ +P +F
Sbjct: 160 LISNVDDDAFVNLTSLRVLELDSNLLTEVPIALQNLVSLQELSLSNNKIKYIP---GGIF 216
Query: 120 HLKSLFLG-----GNPIKTV 134
KS LG GNP+ +
Sbjct: 217 Q-KSPSLGLIELQGNPLMGI 235
>gi|158334565|ref|YP_001515737.1| hypothetical protein AM1_1392 [Acaryochloris marina MBIC11017]
gi|158304806|gb|ABW26423.1| leucine-rich repeat-containing protein [Acaryochloris marina
MBIC11017]
Length = 305
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS L++LDLS N+L + P + L +L L+ NQL LP NL L N+
Sbjct: 76 LSQLQSLDLSGNQLRQLT-PEIGQLTQLQDLFLTQNQLESLPPEIGQLSNLEWLQADGNQ 134
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + + L+ L +L L+ NK++ + + +G L LA L++ DN+L +P EL L
Sbjct: 135 LSRLPKEIG-QLSNLEMLWLRRNKLTHLPAEIGQLSALADLEIMDNQLQTLPSELGRLTQ 193
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+SL + N + ++ I+Q
Sbjct: 194 LQSLKVQNNALSSLPATIVQ 213
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
T+ + LNL N +++V +G L L LDLS N+L + E+ L L+ LFL N ++
Sbjct: 54 TQATDLNLTNLSLTQVPPEIGQLSQLQSLDLSGNQLRQLTPEIGQLTQLQDLFLTQNQLE 113
Query: 133 TVRNDILQ 140
++ +I Q
Sbjct: 114 SLPPEIGQ 121
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
LS+L+ L L NKL LP I + +L +L + NQL LP ++ LT L
Sbjct: 145 LSNLEMLWLRRNKLTH--LPAEIGQLSALADLEIMDNQLQTLP--SELGRLTQLQ-SLKV 199
Query: 61 INNMENDYFLTLTKLSLLNLK---NNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
NN + T+ +LS L L NN+ + S VG L NL LDLSDN+L ++P E
Sbjct: 200 QNNALSSLPATIVQLSSLKLLDLDNNQFKALPSQVGLLNNLETLDLSDNQLKELPSE 256
>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 354
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDL +N+L +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLK 276
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++LFL N + + +I
Sbjct: 277 NLQTLFLSNNQLTILPQEI 295
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L L+LS NQLT LP KNL L L N+ + L L +L L NN
Sbjct: 159 QLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIG-QLQNLKVLFLNNN 217
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+I+ + + + L L L LSDN+L +P E+ L +L++L L N +KT+ +I Q
Sbjct: 218 QITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQ 274
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK L L++N++ LP I ++ L L LS NQL LP +NL L L N
Sbjct: 206 LQNLKVLFLNNNQITI--LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNN 263
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 264 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 322
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 323 NLQTLYLNNNQFSS------QEKKRI 342
>gi|124002081|ref|ZP_01686935.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992547|gb|EAY31892.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 529
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LSH+ + L HN L++D LP I +L+LS N+LT LP+ L L +N +
Sbjct: 361 LSHVAEIRLEHN-LITD-LPTEIGNLYCRQLDLSSNRLTTLPLSIGGLQCLSLNLSYNAL 418
Query: 62 NNMENDYFLTL---TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ + LT+ T L +LNL +N++S + S +G++ NL LDLSDN L+ +P + +L
Sbjct: 419 SYLP----LTIGQWTDLMMLNLSSNQLSYLPSTIGEMENLQDLDLSDNALSYLPATMGNL 474
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L+ L L GN + D+ + +SH+K
Sbjct: 475 KSLRKLNLSGNQLTAFAFDL-----QNLSHLK 501
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
LS+L+ L+L +NKL + P ++ L L+L +NQ+T L P K+L L L N+
Sbjct: 85 LSNLRQLNLGYNKLTTIP-PELNQLKYLQALSLVHNQITSLSPAIGQLKHLQELNLWSNR 143
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + L L LL+L +N + +G L+NL L+L N L +P + +L
Sbjct: 144 LRDLPPELG-NLKSLQLLDLVDNHLEVFPEGIGKLLNLQQLNLEHNRLAVLPKTVGNLTQ 202
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L LG N +K + + I + K + I ++L
Sbjct: 203 LEKLELGNNELKALPDAIGKLKKLQVLEISRNQL 236
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P + + +L +LNL YN+LT +P K L L L N+I ++ + L L LN
Sbjct: 80 PEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQITSL-SPAIGQLKHLQELN 138
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
L +N++ ++ +G+L +L +LDL DN L P
Sbjct: 139 LWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFP 171
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 25/118 (21%)
Query: 26 MRSLTELNLSYNQLTMLPVC------------------------TDCKNLTHLLLGFNKI 61
+ +L +LNL YNQL LP +NL L + N++
Sbjct: 269 LENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQRLNIADNRL 328
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + LTKL L L+NN+I+ + ++G L ++A + L N +TD+P E+ +L+
Sbjct: 329 TALPEQIGM-LTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGNLY 385
>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 377
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 346 NLQTLYLNNNQFSS------QEKKRI 365
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
>gi|418708871|ref|ZP_13269671.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410770801|gb|EKR46014.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456969315|gb|EMG10349.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 447
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 276 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 333
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 334 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 392
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 393 HNLTELYLQYNRIKTLPEEI 412
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 41 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNR 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + + +G L NL I +LS N+L +P E+ +L +
Sbjct: 100 LVTLPGEIG-ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 158
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 159 LRMLYLENNQLKTLPRQMEKLQD 181
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 64 LENLTILRLKNNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 121
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 122 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 173
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 174 RQMEKLQDLEVLNLLINPL 192
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
++L K + + +L L IL L +N +T +P E++ L +LK L+L GN + V +
Sbjct: 1 MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60
Query: 138 ILQDSKRIISHIKTSRLDYHCQNVD 162
I + I +K +R+ + ++
Sbjct: 61 IWELENLTILRLKNNRISTLPKEIE 85
>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 374
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L EL L+YNQLT+LP KNL L L N++ + + L L LNL NN
Sbjct: 133 QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIG-QLKNLQTLNLWNN 191
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
++ +S +G L NL L L+ N+LT +P E+ L +L++L L N +KT+ +I L++
Sbjct: 192 QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKN 251
Query: 142 SKRI 145
KR+
Sbjct: 252 LKRL 255
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L +L+ L+L++N+L++ LP I +++L LNL NQL T+ KNL L L +N
Sbjct: 157 LKNLQALELNNNQLMT--LPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN++ +S +G L NL LDL N+ +P E+ L
Sbjct: 215 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQ 273
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ +I
Sbjct: 274 NLQVLELNNNQLTTLSKEI 292
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+TL+L +N+L++ S + +++L EL L+YNQLT+LP KNL L L N+
Sbjct: 180 LKNLQTLNLWNNQLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQ 238
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L N+ + + + L NL +L+L++N+LT + E+ L +
Sbjct: 239 LKTLSKEIG-QLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQN 297
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L N T+ +I Q
Sbjct: 298 LQELYLSYNQFTTLPEEIGQ 317
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGF 58
L +LK LDL +N K++ + + +++L L L+ NQLT L +NL L L +
Sbjct: 249 LKNLKRLDLGYNQFKIIPNEIE---QLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSY 305
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
N+ + + L L +L L NN++ +S +G L NL L+L +N+L+ E
Sbjct: 306 NQFTTLPEEIG-QLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKE 360
>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 356
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L +LP I +++L EL LS NQLT+LP KNL L+LG N
Sbjct: 162 LKNLQKLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL NN+++ + +G L L L LS N+LT +P E+ L
Sbjct: 220 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 279 NLQELYLNDNQLTTLPKEIGQ 299
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I +++L +LNL YNQLT +L KNL L L N
Sbjct: 116 LQNLQTLILSVNRLTT--FPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN+++ + +G L NL L L DN+LT +P E+ L
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+LK L+ N + + +I Q K
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQK 256
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL++N+ +LP I +++L ELNL NQL LP +NL L+L N
Sbjct: 70 LQNLKSLDLANNQF--KTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVN 127
Query: 60 KIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLIN 97
++ N++ + TL + L LNL N++ + + +G L N
Sbjct: 128 RLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQN 187
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L LS+N+LT +P E+ L +L++L LG N + + +I Q
Sbjct: 188 LQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL + K++ + + L NL LDL++N+ +P E+ L +L+ L L N +K +
Sbjct: 52 VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111
Query: 137 DI--LQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVI 194
+I LQ+ + +I + +RL Q + G + N+ K LD + TL + I
Sbjct: 112 EIGQLQNLQTLI--LSVNRLTTFPQEI--GQLK--------NLQKLNLDYNQLTTLLQEI 159
>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 377
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 26/161 (16%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK- 60
++ LDLS +L +LP+ I +++L L L YNQLT+LP KNL L L N+
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 61 ------INNMENDYFLTLTK---------------LSLLNLKNNKISEVSSNVGDLINLA 99
I ++N L L+ L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+LS NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 346 NLQTLYLNNNQFSS------QEKKRI 365
>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 410
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ LDLS N+ + LP I +++L EL+LS NQ T LP +NL L L
Sbjct: 139 QLQNLQELDLSSNRFTT--LPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSN 196
Query: 59 NKIN---------------NMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLI 96
N+ ++ + F TL K + LNL N+++ +S +G
Sbjct: 197 NRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQ 256
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NL LDLS N T +P E+ L +L++L L GN T ++
Sbjct: 257 NLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEV 298
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 26 MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L L L+ +QLT LP +NL L L N+++++ + L L L L N+
Sbjct: 71 LQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIG-QLQNLKRLFLSLNQ 129
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ + +G L NL LDLS N T +P E+ L +L+ L L GN T+ +I Q
Sbjct: 130 LTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQ 185
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
+++ + + +G L NL IL+L+ ++LT +P E+ L +L+ LFL N + ++ +I LQ+
Sbjct: 60 QLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQN 119
Query: 142 SKRII 146
KR+
Sbjct: 120 LKRLF 124
>gi|334324433|ref|XP_001382029.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 2
[Monodelphis domestica]
Length = 1231
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGFN 59
L +++ L+L HN L+ + +R+L +L +S N + + P + C+ L+ L L +N
Sbjct: 430 LVNMEELELEHNNLIEVNKGWLYGLRTLQQLYVSQNAIDRISPDAWEFCQQLSELDLSYN 489
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELT----DVPCE 114
++ ++ F+ L+ L LNL +N+++ ++ V DL NL LDL +NE++ D
Sbjct: 490 QLTRLDESAFVGLSLLEKLNLGDNRVTHIADGVFKDLSNLQTLDLRNNEISWAIEDASEA 549
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
L L L L GN IK+V
Sbjct: 550 FVGLTKLTKLILQGNHIKSV 569
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 28/160 (17%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNME 65
+LDLSHN+L + S+ L D + L E+ ++YNQLT +P + N+T L L N I +
Sbjct: 247 SLDLSHNRLSNWSISL--DSKVLQEVKMNYNQLTEIPYFGEPTSNITLLSLVHNVIPEVN 304
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTD--------------- 110
+ L L L+L +N+ISE+ ++ + L L+LS+N +
Sbjct: 305 AEQLLFYLSLETLDLSSNQISEIKTSSFPRMQLKYLNLSNNRIATLEAGCFDNLSSSLIV 364
Query: 111 ----------VPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
+P ++ L HL+ L L N IKTV + Q
Sbjct: 365 VKLNRNRISMIPPKIFKLPHLQFLELKRNRIKTVESLTFQ 404
>gi|255081118|ref|XP_002504125.1| predicted protein [Micromonas sp. RCC299]
gi|226519392|gb|ACO65383.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L+ L+ L+L NKL S LP I + SL L L N+L LP +L L LG N
Sbjct: 43 LTSLERLELDDNKLTS--LPAEIGQLTSLKSLWLERNRLMSLPAEIGQLASLEKLYLGDN 100
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ LT L L L +NK++ V + + L +L +L L+DN+LT VP ++ +
Sbjct: 101 QLKSVPA-AIGHLTSLENLYLNDNKLTSVPAAIWQLTSLKVLYLNDNQLTSVPADIGQVT 159
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N + +VR +I
Sbjct: 160 SLRELYLWNNQLTSVRAEI 178
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ LDL NKL + ++ + SL L L N+LT LP +L L L N+
Sbjct: 20 LTSLERLDLRSNKLTTVPAAIW-QLTSLERLELDDNKLTSLPAEIGQLTSLKSLWLERNR 78
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + L L L L +N++ V + +G L +L L L+DN+LT VP + L
Sbjct: 79 LMSLPAEIG-QLASLEKLYLGDNQLKSVPAAIGHLTSLENLYLNDNKLTSVPAAIWQLTS 137
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L+L N + +V DI Q
Sbjct: 138 LKVLYLNDNQLTSVPADIGQ 157
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ LK+L L N+L+S LP I + SL +L L NQL +P +L +L L N
Sbjct: 66 LTSLKSLWLERNRLMS--LPAEIGQLASLEKLYLGDNQLKSVPAAIGHLTSLENLYLNDN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ ++ + LT L +L L +N+++ V +++G + +L L L +N+LT V E+
Sbjct: 124 KLTSVPAAIW-QLTSLKVLYLNDNQLTSVPADIGQVTSLRELYLWNNQLTSVRAEIGRFT 182
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L+L GN + +V +I
Sbjct: 183 SLTLLYLNGNQLASVPEEI 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 19 SLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
S+P I + SL L+L N+LT +P +L L L NK+ ++ + LT L
Sbjct: 12 SVPAEIGKLTSLERLDLRSNKLTTVPAAIWQLTSLERLELDDNKLTSLPAEIG-QLTSLK 70
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L L+ N++ + + +G L +L L L DN+L VP + L L++L+L N + +V
Sbjct: 71 SLWLERNRLMSLPAEIGQLASLEKLYLGDNQLKSVPAAIGHLTSLENLYLNDNKLTSVPA 130
Query: 137 DILQ 140
I Q
Sbjct: 131 AIWQ 134
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ L L+ NKL S ++ + SL L L+ NQLT +P +L L L N+
Sbjct: 112 LTSLENLYLNDNKLTSVPAAIW-QLTSLKVLYLNDNQLTSVPADIGQVTSLRELYLWNNQ 170
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+ ++ + T L+LL L N+++ V +G L +L+ L L+DN+LT +P + L
Sbjct: 171 LTSVRAEIG-RFTSLTLLYLNGNQLASVPEEIGRLTSLSRLLLNDNQLTSLPAAIRDL 227
>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 377
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 346 NLQTLYLNNN 355
>gi|299752379|ref|XP_001830889.2| adenylate cyclase [Coprinopsis cinerea okayama7#130]
gi|298409806|gb|EAU90953.2| adenylate cyclase [Coprinopsis cinerea okayama7#130]
Length = 1852
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
++ L+ L L N+L +S+ + + L LNLS+N+L LP + L L L
Sbjct: 910 LVHSLERLYLGENRLTEESIHPLMIFKELRVLNLSFNELQELPPIFFRNMTQLEELYLSG 969
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNEL----TDVPCE 114
NK+ ++ + +T+LS L L N++ + +G L +L+ILD+ N L + +
Sbjct: 970 NKLTSIPTEDLHRMTRLSTLFLNGNRLQTLPQELGKLKDLSILDVGSNMLKYNINNWEFD 1029
Query: 115 LSSLFH--LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
+ F+ LK L L GN +++ + S+ SH +TSRLD+
Sbjct: 1030 WNWNFNKKLKYLNLSGNNRLQIKS---ESSRNSASHNRTSRLDF 1070
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-----PVCTDCKNLTHLL 55
ML ++ + HN + S L + +M+ L ++S+N +T L PV +LT L
Sbjct: 715 MLPKIQQVYADHNAISSLDLSIGPNMKGL---DVSHNDITQLSLIPGPVGRSPYSLTSLD 771
Query: 56 LGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
L + K++++++ TLT L L L +N I + +G+L L L +SDN L +P +
Sbjct: 772 LSYTKLSSLDDLALGTLTSLKTLKLDHNTIRSIPDTLGELSWLETLTVSDNRLDSLPDSI 831
Query: 116 SSLFHLKSL 124
L L++L
Sbjct: 832 GRLQKLETL 840
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFNKINNME 65
+L LS N ++ L L +L LS + +P + H L L N+I ++
Sbjct: 536 SLKLSRNPMLEIPLDFIQSCSLLRDLRLSNMAMKKVPQSVQYSSTLHRLDLSSNRIADLT 595
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ Y + L LN+ NNK+ ++ + G L L L++S+N T+ P E+ + +L++L
Sbjct: 596 DAYLDHIPNLLELNVMNNKLEKLPWHFGRLRCLVTLNISNNRFTEFPKEVFQMKNLRTLD 655
Query: 126 LGGNPIKTVRNDILQ 140
+ N IK + ++ Q
Sbjct: 656 VSFNTIKVIPEELGQ 670
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
S L LDLS N+ ++D ++D + +L ELN+ N+L LP
Sbjct: 579 STLHRLDLSSNR-IADLTDAYLDHIPNLLELNVMNNKLEKLPW----------------- 620
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+F L L LN+ NN+ +E V + NL LD+S N + +P EL L L
Sbjct: 621 ------HFGRLRCLVTLNISNNRFTEFPKEVFQMKNLRTLDVSFNTIKVIPEELGQLAEL 674
Query: 122 KSLFLGGNPI 131
+ L GN I
Sbjct: 675 EHFLLVGNQI 684
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML---PVCTDC---------- 48
L L+TLD +HN +S+ + SLT +N++ N L PV +D
Sbjct: 834 LQKLETLD-AHNNSLSELPQSLWNCASLTRINVTSNFLGSWHDPPVSSDVGIDDASSLYL 892
Query: 49 -------------------KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
+L L LG N++ + +L +LNL N++ E+
Sbjct: 893 ARKGSTASTTSTSGLPPLVHSLERLYLGENRLTEESIHPLMIFKELRVLNLSFNELQELP 952
Query: 90 S-NVGDLINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
++ L L LS N+LT +P E L + L +LFL GN ++T+ ++ + I
Sbjct: 953 PIFFRNMTQLEELYLSGNKLTSIPTEDLHRMTRLSTLFLNGNRLQTLPQELGKLKDLSIL 1012
Query: 148 HIKTSRLDYHCQN 160
+ ++ L Y+ N
Sbjct: 1013 DVGSNMLKYNINN 1025
Score = 41.2 bits (95), Expect = 0.44, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+ +L L++ +NKL + LP F +R L LN+S N+ T P KNL L + FN
Sbjct: 602 IPNLLELNVMNNKL--EKLPWHFGRLRCLVTLNISNNRFTEFPKEVFQMKNLRTLDVSFN 659
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
I + + L +L L N+IS+ +L NL++LD N ++D+
Sbjct: 660 TIKVIPEE-LGQLAELEHFLLVGNQISKFPDQARELHNLSMLDCRRNSVSDL 710
>gi|126631489|gb|AAI33857.1| Si:ch211-147a11.7 protein [Danio rerio]
Length = 541
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +K LDLS N+L +LP I + L LN+S N LT LP + C L + + N
Sbjct: 72 LKAVKVLDLSVNQL--QALPEEICALTELNTLNVSCNSLTALPDGLSKCVKLASINVSKN 129
Query: 60 KINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
+++ + D + + L LS + N I E+SS + +L +L +LDLS+N+L ++P EL+
Sbjct: 130 ELSRLPEDLWCSGLELLSSIIASENAIEELSSEIQNLPSLKVLDLSNNKLQELPAELADC 189
Query: 119 FHLKSLFLGGNPIKTVR 135
LK GN +K R
Sbjct: 190 PKLKETNFKGNKLKDKR 206
>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 423
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L L L HN+L LP I +++L L NQ T+LP +NL L L +N
Sbjct: 252 LQNLHELYLGHNQLTI--LPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 309
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL LNL NN+++ + + L NL L+LS+N+L +P E+ L
Sbjct: 310 QLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 368
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LKSL L N + T+ +I Q
Sbjct: 369 NLKSLDLSNNQLTTLPKEIEQ 389
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LK LDL HN+L +LP I +++L L L YNQLT LP KNL L L N
Sbjct: 68 LQNLKLLDLGHNQLT--ALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L+L NN+++ + +G L NL L LS N+LT +P E+ L
Sbjct: 126 QLTTLPTE-IRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLE 184
Query: 120 HLKSLFL 126
+L+ L L
Sbjct: 185 NLQLLSL 191
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L EL LSYNQLT P + L L L N++ + + L L LNL N
Sbjct: 297 QLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEE-IEQLKNLKTLNLSEN 355
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
++ + +G L NL LDLS+N+LT +P E+ L +L++L L N
Sbjct: 356 QLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LL+L +N+++ + +G L NL +L L N+LT +P E+ L +LK LFL N +
Sbjct: 68 LQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQL 127
Query: 132 KTVRNDILQ 140
T+ +I Q
Sbjct: 128 TTLPTEIRQ 136
>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 277
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L LS+N+L S LP I+ +R+L L+L YNQL LP +NL L LG N
Sbjct: 151 LRSLKRLYLSNNQLTS--LPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN 208
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L KL L L N++ + +G L L LDL+ N+L +P E+ +L
Sbjct: 209 QLGNLPQEIG-KLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQ 267
Query: 120 HLKS 123
L++
Sbjct: 268 RLRA 271
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L LK L L N+ + LP I +R L LNLS NQLT LP ++L L L N
Sbjct: 105 LQRLKWLSLESNQFAT--LPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L N++ + +G L NL LDL N+L ++P E+ L
Sbjct: 163 QLTSLPQEIN-KLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQ 221
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN ++++ +I
Sbjct: 222 KLGELELSGNQLRSLPQEI 240
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+L H L S LP I ++ L L+L +LT LP +NL L L N++
Sbjct: 41 VRILNLGHYPLTS--LPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLA 96
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ TL +L L+L++N+ + + +G L L L+LS+N+LT +P E+ L LK
Sbjct: 97 KFPQEIG-TLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLK 155
Query: 123 SLFLGGNPIKTVRNDI 138
L+L N + ++ +I
Sbjct: 156 RLYLSNNQLTSLPQEI 171
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDL KL + LP I +++L EL+L+ NQL P + L L K
Sbjct: 61 LQRLERLDLE--KLTT--LPKEIGRLQNLEELDLTSNQLAKFP--QEIGTLQRL-----K 109
Query: 61 INNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
++E++ F TL K L LNL NN+++ + + +G L +L L LS+N+LT +P
Sbjct: 110 WLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQ 169
Query: 114 ELSSLFHLKSLFLGGNPIKTVRNDI 138
E++ L +L+ L L N + + +I
Sbjct: 170 EINKLRNLQYLDLFYNQLGNLPKEI 194
>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 400
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL LS N+L + LP I +++L EL L N LT LP KNL L LG+N
Sbjct: 229 LENLQTLHLSDNQLTT--LPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + N+ L L L L+NN+ + + + L NL +L L++N+L +P E+ L
Sbjct: 287 QFKIIPNE-IEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQ 345
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N +KT+ N+I
Sbjct: 346 NLQVLDLNDNQLKTLPNEI 364
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 26/140 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+TLDL HN+LV LP I+ +++L L LS NQL +LP +
Sbjct: 114 LINLQTLDLIHNQLVI--LPKEINQLQNLRVLGLSNNQLKILP---------------KE 156
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I +EN L L+L N++ + + +G L NL LDLS N LT +P E+ L +
Sbjct: 157 IGQLEN--------LQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKN 208
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L N +KT+ +I Q
Sbjct: 209 LRELYLSSNQLKTLPKEIGQ 228
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 26/137 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
++ LDLS KL +LP I +++L L L NQLT LP N+I
Sbjct: 48 VRVLDLSEQKL--KTLPKEIGQLQNLQTLYLWNNQLTTLP---------------NEIGQ 90
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
++N L LNL N+++ + + +G LINL LDL N+L +P E++ L +L+
Sbjct: 91 LKN--------LQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRV 142
Query: 124 LFLGGNPIKTVRNDILQ 140
L L N +K + +I Q
Sbjct: 143 LGLSNNQLKILPKEIGQ 159
>gi|242060956|ref|XP_002451767.1| hypothetical protein SORBIDRAFT_04g007490 [Sorghum bicolor]
gi|241931598|gb|EES04743.1| hypothetical protein SORBIDRAFT_04g007490 [Sorghum bicolor]
Length = 1140
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL--TMLPVCTDCKNLTHLLLGFN 59
+++L+ L+L N+ P ++ L L+LSYN + + P ++C +LL N
Sbjct: 100 ITYLRQLNLPQNRFYGILPPELGNIHDLETLDLSYNSIEGQIPPSLSNCSRFVEILLDSN 159
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELT-DVPCELSS 117
K+ F +L L LL+L+NN+++ + S +G L+NL L L+ N +T ++P E+ S
Sbjct: 160 KLQGGIPSEFSSLPNLQLLSLRNNRLTGRLHSTIGRLVNLKSLLLTFNNITGEIPTEIGS 219
Query: 118 LFHLKSLFLGGN 129
L +L +L LG N
Sbjct: 220 LENLSTLDLGSN 231
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM-LPVCTDCKNLTHLLLGFNK 60
L +L TLDL N+L P ++ LT L+ S+N L +P +L+ L LG N
Sbjct: 220 LENLSTLDLGSNQLFGTIPPSLGNLSHLTALSFSHNNLEQSMPPLQGLLSLSILDLGQNS 279
Query: 61 INNMENDYFLTLTKLSLLNLKNNKI-SEVSSNVGDLINLAILDLSDNELTD-VPCELSSL 118
+ + L+ L L L+ N + + ++G+L L L L +N L VP +++L
Sbjct: 280 LEGNIPAWIGNLSSLVTLILEKNSLEGNIPESLGNLEMLTTLALQNNNLQGHVPHSITNL 339
Query: 119 FHLKSLFLGGNPIK 132
+ LK+L++G N ++
Sbjct: 340 YSLKNLYIGYNELE 353
>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
Length = 535
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 144 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L KL +L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 202 RITTVEKD-IKNLPKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 260
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 261 QITNLDLQHN 270
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N+
Sbjct: 353 FSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 412
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + D L L L L NN+++ + +G L NL L L +N LT +P E+ +L +
Sbjct: 413 LTKIPEDVS-GLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLEN 471
Query: 121 LKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMS 167
L+ L+L NP + ++ ++ SK I I+ L + + GG S
Sbjct: 472 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPS 519
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 325 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 384
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N + T+ I
Sbjct: 385 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTLPRGI 443
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 20 LPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSL 77
LP I ++ LTEL L N+L LP C NL L L N + ++ D L KL +
Sbjct: 114 LPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRM 172
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L+L++NK+ E+ S V L +L L L N +T V ++ +L L L + N IK + +
Sbjct: 173 LDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPAE 232
Query: 138 I 138
I
Sbjct: 233 I 233
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L+ L L L NKL SLP + + +L L LS N LT LP D K L L L N
Sbjct: 121 LTQLTELYLYSNKL--QSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHN 178
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + + L L+ L L+ N+I+ V ++ +L L +L + +N++ +P E+ L
Sbjct: 179 KLREIPSVVY-RLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPAEIGELC 237
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L + N ++ + +I
Sbjct: 238 NLITLDVAHNQLEHLPKEI 256
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + +LP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 104 LDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPD 162
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N I TV DI K I+ I+
Sbjct: 163 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIR 222
Query: 151 TSRL 154
+++
Sbjct: 223 ENKI 226
>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 267
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L++N+L + LP I ++ L L L NQL +LP +NL L+L N
Sbjct: 71 LQKLEWLYLTNNQLAT--LPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENN 128
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDLSDN+L +P E+ +L
Sbjct: 129 RLESFPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQ 187
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 188 RLEWLSLKNNQLATLPKEI 206
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
M LK L L++N+L + LP I +R L L L N+LT LP +NL L L
Sbjct: 1 MRPALKWLHLANNQLTT--LPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLEN 58
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + TL KL L L NN+++ + +G L L L L +N+L +P E+ L
Sbjct: 59 NRLITLPKEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKL 117
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+LK L L N +++ +I
Sbjct: 118 QNLKELILENNRLESFPKEI 137
>gi|124009105|ref|ZP_01693788.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123985319|gb|EAY25239.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 640
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
LS L TL L H + S +P FI D+ SL LNLSYN ++ LP + +NL L F
Sbjct: 61 LSKLHTLSLMHTR--SAKVPEFIFDITSLQSLNLSYNPISRLP--HNAQNLVRLRELF-- 114
Query: 61 INNMENDYFLT----LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
++N + F L +L LNL+NN+I V ++G L L L L++N + +P E
Sbjct: 115 LHNCKLKAFPANIHKLEQLETLNLENNQIEHVPPSIGQLSKLQSLILTNNNIQGLPGEF- 173
Query: 117 SLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
+L ++ L LG NP N++ Q K I + +K
Sbjct: 174 ALLNVSKLHLGSNPF---YNNLGQKQKTIGALLK 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 15 LVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLT 73
L+SDS+ + ++ L L N L+ LP T + L L L NKI L L
Sbjct: 506 LLSDSIGKYTHLKILY---LHNNSLSTLPGEFTQLQKLYVLSLKKNKIQEFPLQ-LLALP 561
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+L L+L +NKI ++ ++G L L L+L +N+L +P ++ L LK+L L GNPIK
Sbjct: 562 ELDNLDLSSNKIEKLPDDIGKLTKLKRLNLRNNKLNQLPESIAKLKQLKTLNLEGNPIK 620
>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 377
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L++L+L N + Q+ KRI
Sbjct: 346 NLQTLYLNNNQFSS------QEKKRI 365
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
>gi|421124102|ref|ZP_15584372.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135003|ref|ZP_15595133.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410020886|gb|EKO87681.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410438589|gb|EKP87675.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 399
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 228 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 285
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 286 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 344
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 345 HNLTELYLQYNRIKTLPEEI 364
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 16 LENLTILRLKNNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 73
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 74 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 125
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 126 RQMEKLQDLEVLNLLINPL 144
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ +LT L L N+++ LP + KNL L L N++ + + L N
Sbjct: 15 ELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN- 73
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
+I + + +G L NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 74 RIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 133
>gi|387915782|gb|AFK11500.1| Ras suppressor protein 1 isoform 2 [Callorhinchus milii]
Length = 276
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS++ L LSHNKL ++P + ++R+L LN NQ+ LP + + L HL LG N
Sbjct: 38 LSNIAQLVLSHNKLT--AVPANVAELRNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMN 95
Query: 60 KINNMENDY------------------------FLTLTKLSLLNLKNNKISEVSSNVGDL 95
++N++ + F LT L L L +N + +G L
Sbjct: 96 RLNSLPRGFGSLPALEVLDLTYNNMNENSLPGNFFYLTTLRALYLSDNDFETLPPEIGKL 155
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L I+ L DN+L +P E+ L LK L + GN
Sbjct: 156 TKLQIISLRDNDLISLPKEIGELTQLKELHIQGN 189
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
+L+ ++ L L +NK++ V +NV +L NL +L+ +N++ ++P ++SSL LK L LG
Sbjct: 35 LFSLSNIAQLVLSHNKLTAVPANVAELRNLEVLNFFNNQIEELPTQISSLQKLKHLNLGM 94
Query: 129 N 129
N
Sbjct: 95 N 95
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 20 LPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLL 78
+P + ++ +L LS+N+LT +P + +NL L N+I + +L KL L
Sbjct: 32 VPGLFSLSNIAQLVLSHNKLTAVPANVAELRNLEVLNFFNNQIEELPTQ-ISSLQKLKHL 90
Query: 79 NLKNNKISEVSSNVGDLINLAILDLSDNELTD--VPCELSSLFHLKSLFLGGNPIKTVRN 136
NL N+++ + G L L +LDL+ N + + +P L L++L+L N +T+
Sbjct: 91 NLGMNRLNSLPRGFGSLPALEVLDLTYNNMNENSLPGNFFYLTTLRALYLSDNDFETLPP 150
Query: 137 DILQDSK-RIIS 147
+I + +K +IIS
Sbjct: 151 EIGKLTKLQIIS 162
>gi|284010607|dbj|BAI66783.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 275
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ L L+ NKL + +F +++L L LS NQL LP V L L L N
Sbjct: 63 LTKLRLLYLNDNKLQALPAGVFDQLKNLETLWLSENQLQSLPNGVFDKLTQLKELWLDNN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
K+ ++ F LTKL++L L NNK+ + V D L L L++ +N+L VP E S
Sbjct: 123 KLTSLPPRVFDKLTKLTILGLDNNKLQSLPEGVFDKLTELRTLEMRNNQLKSVPEEAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
L LK L L NP N I+ +K + + D VD G
Sbjct: 183 LEKLKMLQLQENPWDCTCNGIIYMAKWL-----KKKADEGLGGVDTAG 225
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L L++NKL S +F + L L L+ N+L LP V KNL L L N++ +
Sbjct: 43 KKLVLNYNKLSKLSPTVFHRLTKLRLLYLNDNKLQALPAGVFDQLKNLETLWLSENQLQS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHL 121
+ N F LT+L L L NNK++ + V D L L IL L +N+L +P + L L
Sbjct: 103 LPNGVFDKLTQLKELWLDNNKLTSLPPRVFDKLTKLTILGLDNNKLQSLPEGVFDKLTEL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI-ISHIKTSRLDYHCQNV 161
++L + N +K+V + +++ + ++ + D C +
Sbjct: 163 RTLEMRNNQLKSVPEEAFDSLEKLKMLQLQENPWDCTCNGI 203
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
S +LT +P + D K L+L +NK++ + F LTKL LL L +NK+ + + V
Sbjct: 27 SSKRLTAIPSNIPADTK---KLVLNYNKLSKLSPTVFHRLTKLRLLYLNDNKLQALPAGV 83
Query: 93 GD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGN 129
D L NL L LS+N+L +P + L LK L+L N
Sbjct: 84 FDQLKNLETLWLSENQLQSLPNGVFDKLTQLKELWLDNN 122
>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
Length = 529
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L+ LK LDL HNKL D +PL I + SL EL +++N+LT ++ + +NL HL N
Sbjct: 113 LTSLKRLDLRHNKLEGD-VPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + ++ L L L LK+N ++ + + +L+ILD+S N+L +P ++ +
Sbjct: 172 KLTEVPSELG-ELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGNCE 230
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L SL L N ++ + + I Q K + +++++++
Sbjct: 231 NLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQI 265
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ L + NK+ +LP I +R + S NQ++ LP NLT L + N
Sbjct: 70 LQNLYVQKNKI--HTLPREIGCLREMQIFAASENQISSLP--ESLANLTSLKRLDLRHNK 125
Query: 64 MENDYFLTLTKLSLL---NLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+E D L + +LS L + +NK++ + S +G+L NL LD S N+LT+VP EL L
Sbjct: 126 LEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKA 185
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + ++ I Q
Sbjct: 186 LQKLMLKSNHLTSIPEAISQ 205
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEN 66
LD+S N L S S+ + ++ L EL +S N+L LP K L L L NKI + +
Sbjct: 350 LDISSNLLESVSVGIG-NLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPS 408
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
D T L +LNL +NKI ++ +++G L L L L +N+L +P + L L+ LF+
Sbjct: 409 DIGFC-TNLEVLNLTSNKIEQLPTDIGSLQRLRKLLLGENDLLQIPPHIGMLDSLQELFI 467
Query: 127 GGN 129
N
Sbjct: 468 NSN 470
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKIN 62
L LD+SHN+L SLP I + +LT L+L YN+L ++P D CK L H + N+I+
Sbjct: 209 LSILDMSHNQL--KSLPEKIGNCENLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQIS 266
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ T + +L + N ++ ++ L NL D S N+++ + ++ +L +
Sbjct: 267 CFPPSFLKKCTMIQVLTISRNTFKDI-PDLSKLDNLTAFDGSFNKISSLRPKVFALPKIL 325
Query: 123 SLFLGGNPIKTVRNDI 138
+ L N IK + +I
Sbjct: 326 KVLLHNNLIKIIPPEI 341
>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
[Rattus norvegicus]
Length = 524
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L +LS L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITAVEKDVR-NLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L L++ N+L S LPL F S+ ELNL+ NQLT +P + +L L+L N +
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L KL L+L+ NK+ + + + L +L L L++N+LT +P + L +L
Sbjct: 439 KLPHGLG-NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 123 SLFLGGN 129
L LG N
Sbjct: 498 HLGLGEN 504
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P ++ LTEL L N+L LP C NL L L N + ++ D L KL +L+
Sbjct: 117 PSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLD 175
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L++NK+ E+ S V L +L L L N +T V ++ +L L +L + N IK + +I
Sbjct: 176 LRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEI 234
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
>gi|417765439|ref|ZP_12413401.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352376|gb|EJP04572.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 399
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 228 LKHLERLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 285
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 286 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 344
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 345 HNLTELYLQYNRIKTLPEEI 364
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 16 LENLTILRLENNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 73
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 74 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 125
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 126 RQMEKLQDLEVLNLLINPL 144
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ +LT L L N+++ LP + KNL L L N++ + + L N
Sbjct: 15 ELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN- 73
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
+I + + +G L NL I +LS N+L +P E+ +L +L+ L+L N +KT+ + LQD
Sbjct: 74 RIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQD 133
>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
Length = 313
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
+ +L+ L+L N+L S LP I +++L LNL+ NQ T LP +NL L L
Sbjct: 15 LFQNLEKLNLDGNQLTS--LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDG 72
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ ++ + L L +LNL N+++ + +G L NL LDL N+ T +P E+ L
Sbjct: 73 NQFTSLPKEIG-QLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQL 131
Query: 119 FHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
+L+ L L GN + ++ +I LQ+ +R+
Sbjct: 132 QNLRVLNLAGNQLTSLPKEIGQLQNLERL 160
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L+L+ N+ S LP I +++L L+L NQ T LP +NL L L
Sbjct: 38 QLQNLRVLNLAGNQFTS--LPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAG 95
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ + L L L+L N+ + + +G L NL +L+L+ N+LT +P E+ L
Sbjct: 96 NQLTSLPKEIG-QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQL 154
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L GN ++ +I Q K
Sbjct: 155 QNLERLDLAGNQFTSLPKEIGQLQK 179
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ LDL N+ S LP I +++L LNL+ NQLT LP +NL L L
Sbjct: 107 QLQNLERLDLDGNQFTS--LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAG 164
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV------------GD-----------L 95
N+ ++ + L KL LNL +N+ + + GD L
Sbjct: 165 NQFTSLPKEIG-QLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL 223
Query: 96 INLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
NL L L N+LT +P E+ L +L L L N +KT+ +I Q K
Sbjct: 224 QNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQK 271
>gi|124006087|ref|ZP_01690923.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
gi|123988264|gb|EAY27917.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
Length = 387
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 28/184 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L+ L+TLDL+ N + + LP F + L ELNL N++T LP+ T NL L L N
Sbjct: 193 LTQLQTLDLTANGITN--LPKSFGQLTQLQELNLQANRITTLPMSFTQLANLKKLNLRQN 250
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL--------------------- 98
+ + F +L +L+ LNL+ NK S++ S + L L
Sbjct: 251 RFKVFPSHIF-SLNQLTSLNLRKNKFSQIPSGITRLQQLEELNLQQNALSRLPTGIAAWK 309
Query: 99 --AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
L+LS N+LT+ P E+S L +L+ L L N I T+ +I Q K + ++ +RL
Sbjct: 310 KMKKLNLSKNKLTNFPVEISQLSNLEELNLSFNQISTIPANIGQLKKLKLLNVANNRLSS 369
Query: 157 HCQN 160
+N
Sbjct: 370 AEKN 373
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI--DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L++ +++L DSLP I + L LNL N+LT LP K L L L +
Sbjct: 100 LRNLQVLEMVYSEL--DSLPPVIADSLDYLQVLNLKNNKLTSLPTEMAKMKYLRRLNLEY 157
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ D ++ L LN+K N++S++S+ +G L L LDL+ N +T++P L
Sbjct: 158 NLLEDIP-DVMANMSGLRSLNIKFNRLSKISNKIGALTQLQTLDLTANGITNLPKSFGQL 216
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L L N I T+
Sbjct: 217 TQLQELNLQANRITTL 232
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L++LK L+L N+ +F + LT LNL N+ + +P T + L L L N
Sbjct: 239 LANLKKLNLRQNRFKVFPSHIF-SLNQLTSLNLRKNKFSQIPSGITRLQQLEELNLQQNA 297
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + K+ LNL NK++ + L NL L+LS N+++ +P + L
Sbjct: 298 LSRLPTG-IAAWKKMKKLNLSKNKLTNFPVEISQLSNLEELNLSFNQISTIPANIGQLKK 356
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L + N + + + L+
Sbjct: 357 LKLLNVANNRLSSAEKNKLR 376
>gi|455790005|gb|EMF41901.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 488
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 317 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 374
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 375 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 433
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 434 HNLTELYLQYNRIKTLPEEI 453
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 82 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 140
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + + +G L NL I +LS N+L +P E+ +L +
Sbjct: 141 LVTLPGEIG-ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 199
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 200 LRMLYLENNQLKTLPRQMEKLQD 222
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 105 LENLTILRLENNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 162
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 163 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 214
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 215 RQMEKLQDLEVLNLLINPL 233
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+ + +L+L K + + +L L IL L +N +T +P E++ L +LK L+L GN +
Sbjct: 37 SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLT 96
Query: 133 TVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
V +I + I ++ +R+ + ++
Sbjct: 97 IVPKEIWELENLTILRLENNRISTLPKEIE 126
>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 377
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 28/161 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------- 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 48 VRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 106 TLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L+L N + + Q+ KR T +L CQ
Sbjct: 346 NLQTLYLNNNQLSS------QEKKR------TRKLIPKCQ 373
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
>gi|253401395|gb|ACT31455.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVFDRLTKLKELWLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
+ RT T
Sbjct: 229 SDGTVVRTVT 238
>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
Length = 1697
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
++ L+ LD+S+NKL S +P + ++ L L+ YN LT LP + LTHL + N
Sbjct: 35 ITDLEFLDVSNNKLTS--IPEAVGRLQKLYRLDADYNTLTSLPQAIGSLQKLTHLYIYDN 92
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K++ + L KL+ L + NN+++ S V L NL +L++S N+L + P + L
Sbjct: 93 KLSTLPPG-VEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQ 151
Query: 120 HLKSLFLGGNPIKTV 134
L++L++ GN + V
Sbjct: 152 KLRTLYINGNQLTEV 166
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L+HL D NKL +LP ++ ++ LT+L + NQLT P VC+ NL L + +
Sbjct: 84 LTHLYIYD---NKL--STLPPGVEKLQKLTKLFIGNNQLTGFPSGVCS-LPNLEVLEVSY 137
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ N L KL L + N+++EV V L NL +L +S+N+L+ P + L
Sbjct: 138 NKLPNFP-PVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVEKL 196
Query: 119 FHLKSLFLGGNPIKTV 134
L+ L++ GN + V
Sbjct: 197 QKLRELYIYGNQLTEV 212
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
+L +L+ L + +NKL S P ++ L EL + NQLT +P VC+ NL L +G
Sbjct: 1051 LLPNLEVLSVGNNKL-STFPPGVEKLQKLRELYIRDNQLTEVPSGVCS-LPNLEVLSVGK 1108
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I + DY L +L L++ N + +E V L + L + VP E+ SL
Sbjct: 1109 NPIRRLP-DYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSL 1167
Query: 119 FHLKSLFLGGNPIKTV 134
HL+ L L N +KT+
Sbjct: 1168 QHLQVLALDKNLLKTL 1183
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 38/168 (22%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFI-DMRSLTELNLSYNQL 39
++ L+ LD+S+NKL S SLP I ++ L L + NQL
Sbjct: 946 ITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQL 1005
Query: 40 TMLP--VCTDCKNLTHLLL----------GFNKINNMENDYF---LTLTKLSLLNLKNNK 84
T +P VC+ NL L + G K+ + Y L L +L++ NNK
Sbjct: 1006 TEVPSGVCS-LPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYINGVCLLPNLEVLSVGNNK 1064
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+S V L L L + DN+LT+VP + SL +L+ L +G NPI+
Sbjct: 1065 LSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIR 1112
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
+L +L+ L +S+NKL S P ++ L EL + NQLT +P VC+ NL L +
Sbjct: 172 LLPNLEVLSVSNNKL-STFPPGVEKLQKLRELYIYGNQLTEVPSGVCS-LPNLEVLSVYN 229
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLS-------------- 104
N ++ L KL L + N+++EV V L N+ L +S
Sbjct: 230 NNLSTFPPG-VEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKL 288
Query: 105 ---------DNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
DN+LT+VP + SL +L+ L +G NPI+++ + + + ++ + +LD
Sbjct: 289 QKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLD 348
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
LDLS+ L S +F D+ L L++S N+LT +P +
Sbjct: 929 LDLSNQGLTSIPEEVF-DITDLEVLDVSNNKLTSIP-----------------------E 964
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
L KL L+ N ++ + +G L L L + DN+LT+VP + SL +L+ L +
Sbjct: 965 AIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVY 1024
Query: 128 GNPIKT 133
N + T
Sbjct: 1025 NNKLST 1030
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L+L N ++ + V D+ +L +LD+S+N+LT +P + L L L GN + ++
Sbjct: 929 LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQA 988
Query: 138 ILQDSKRIISHIKTSRL 154
I K I +I ++L
Sbjct: 989 IGSLQKLIHLYIYDNQL 1005
>gi|224055364|ref|XP_002298494.1| predicted protein [Populus trichocarpa]
gi|222845752|gb|EEE83299.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
Query: 26 MRSLTELNLSYNQLTMLP-----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
++ LT L++S+N L+ LP +C+ L L + NK++++ + L LT+L +L +
Sbjct: 199 LKHLTVLSVSHNNLSTLPSELGALCS----LRQLHVSNNKLSSLPMEIGL-LTQLEVLKV 253
Query: 81 KNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
NN+IS V +GD +LA +DLS N LT++P L +LK+L LG N +K++ + I +
Sbjct: 254 NNNRISNVPMCIGDCSSLAEVDLSSNLLTELPVTFGDLLNLKALHLGNNGLKSLPSTIFK 313
>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 379
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++L EL L+YNQLT+LP KNL L L N++ + + L L LNL NN
Sbjct: 138 QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIG-QLKNLQTLNLWNN 196
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQD 141
++ +S +G L NL L L+ N+LT +P E+ L +L++L L N +KT+ +I L++
Sbjct: 197 QLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKN 256
Query: 142 SKRI 145
KR+
Sbjct: 257 LKRL 260
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L +L+ L+L++N+L++ LP I +++L LNL NQL T+ KNL L L +N
Sbjct: 162 LKNLQALELNNNQLMT--LPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN++ +S +G L NL LDL N+ +P E+ L
Sbjct: 220 QLTILPNEIG-QLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L+ L L N + T+ +I
Sbjct: 279 NLQVLELNNNQLTTLSKEI 297
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+TL+L +N+L++ S + +++L EL L+YNQLT+LP KNL L L N+
Sbjct: 185 LKNLQTLNLWNNQLMTLSKGIG-QLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQ 243
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L N+ + + + L NL +L+L++N+LT + E+ L +
Sbjct: 244 LKTLSKEIG-QLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQN 302
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L+L N T+ +I Q
Sbjct: 303 LQELYLSYNQFTTLPEEIGQ 322
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGF 58
L +LK LDL +N K++ + + +++L L L+ NQLT L +NL L L +
Sbjct: 254 LKNLKRLDLGYNQFKIIPNEIE---QLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSY 310
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
N+ + + L L +L L NN++ +S +G L NL L+L +N+L+ E
Sbjct: 311 NQFTTLPEEIG-QLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKE 365
>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 281
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK L LS+N+L S LP I+ +R+L L+L YNQL LP +NL L LG N
Sbjct: 151 LRSLKRLYLSNNQLTS--LPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN 208
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L KL L L N++ + +G L L LDL+ N+L +P E+ +L
Sbjct: 209 QLGNLPQEIG-KLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQ 267
Query: 120 HLKS 123
L++
Sbjct: 268 RLRA 271
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L LK L L N+ + LP I +R L LNLS NQLT LP ++L L L N
Sbjct: 105 LQRLKWLSLESNQFAT--LPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNN 162
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + L L L+L N++ + +G L NL LDL N+L ++P E+ L
Sbjct: 163 QLTSLPQEIN-KLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQ 221
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L L L GN ++++ +I
Sbjct: 222 KLGELELSGNQLRSLPQEI 240
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L+L H L S LP I ++ L L+L +LT LP +NL L L N++
Sbjct: 41 VRILNLGHYPLTS--LPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLA 96
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ TL +L L+L++N+ + + +G L L L+LS+N+LT +P E+ L LK
Sbjct: 97 KFPQEIG-TLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLK 155
Query: 123 SLFLGGNPIKTVRNDI 138
L+L N + ++ +I
Sbjct: 156 RLYLSNNQLTSLPQEI 171
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ LDL KL + LP I +++L EL+L+ NQL P + L L K
Sbjct: 61 LQRLERLDLE--KLTT--LPKEIGRLQNLEELDLTSNQLAKFP--QEIGTLQRL-----K 109
Query: 61 INNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC 113
++E++ F TL K L LNL NN+++ + + +G L +L L LS+N+LT +P
Sbjct: 110 WLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQ 169
Query: 114 ELSSLFHLKSLFLGGNPIKTVRNDI 138
E++ L +L+ L L N + + +I
Sbjct: 170 EINKLRNLQYLDLFYNQLGNLPKEI 194
>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
Length = 430
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
+H+ LDLS N+L+ +PLF+ + LT+LNL+ N+L LP VC + LT L L N+
Sbjct: 144 NHITELDLSDNRLLR--VPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNE 201
Query: 61 INNMENDYFLTLTKLSLLNLKNNKIS---------------EVSSNV--------GDLIN 97
+ + D+ ++LS L + N++ ++S N+ GDL N
Sbjct: 202 LKQLP-DFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQN 260
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL--- 154
L+ILD+ +N LT +P +L L L L N + + Q + + + +RL
Sbjct: 261 LSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQL 320
Query: 155 -DYHCQ 159
++ CQ
Sbjct: 321 PNFICQ 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
S L L++S N+L SLP +I ++ L L++S N LT LP D +NL+ L + N+
Sbjct: 213 SQLSELEISGNQL--GSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNR 270
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ + F L +L L+L +N++S + + LA+LDLS N L +P + H
Sbjct: 271 LTSLPAN-FGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSH 329
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L LG N + + +DI
Sbjct: 330 LNDLHLGYNELTELPDDI 347
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L L L+HN+L S P M+ L L+LS+N+L LP +C +L L LG+N
Sbjct: 281 LGQLHRLSLAHNQL-SLLPPPAAQMQRLAVLDLSHNRLMQLPNFIC-QFSHLNDLHLGYN 338
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + +D L LT+L +LN+ +N I + +V +L + LDLS ++ +P +S+L
Sbjct: 339 ELTELPDDIGL-LTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFISNLN 397
Query: 120 HL 121
L
Sbjct: 398 RL 399
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L+ L L+LS N+L LP FI + L+EL +S NQL LP K L HL + N
Sbjct: 189 LTQLTRLNLSGNEL--KQLPDFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGN 246
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L LS+L++ NN+++ + +N G+L L L L+ N+L+ +P + +
Sbjct: 247 MLTTLP-ETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQ 305
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L L L N + + N I Q SH+ L Y+
Sbjct: 306 RLAVLDLSHNRLMQLPNFICQ-----FSHLNDLHLGYN 338
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L LDLS +L SLP + ++ LTEL+L N+L LP +L L K N
Sbjct: 54 LNRLDLSFRRL--QSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL--DLKWNQ 109
Query: 64 MEN--DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+E D F LT L+ L L NK++ + + ++ LDLSDN L VP L + L
Sbjct: 110 LETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRL 169
Query: 122 KSLFLGGNPIKTV 134
L L N ++ +
Sbjct: 170 TKLNLARNKLENL 182
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LG 57
+ L LDLSHN+L+ LP FI L +L+L YN+LT LP D LT L +
Sbjct: 304 MQRLAVLDLSHNRLMQ--LPNFICQFSHLNDLHLGYNELTELP--DDIGLLTELEVLNIA 359
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
N I + LTK++ L+L + +I + + +L L ILD+ + + +P L++
Sbjct: 360 HNNIGALP-PSVANLTKMTRLDLSSTQIPYLPKFISNLNRLCILDVRNTRMK-IPLALAN 417
Query: 118 LFHLKSLFLG 127
++ G
Sbjct: 418 RIESNAVMAG 427
>gi|78100458|gb|ABB21052.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 345
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
+ L L L++N+L++ +F ++++L L + NQL LPV NL L L N
Sbjct: 82 FTKLTFLSLNNNQLLTLPAGVFDELKNLETLWIQQNQLQTLPVGVFDHLVNLDKLYLYQN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSS 117
++ ++ F LTKL++L L NK+ + V D L L L ++ N+L VP S
Sbjct: 142 QLESLPQGIFDKLTKLTILWLNTNKLHSLPEGVFDKLTQLKTLQMTSNQLRSVPNRAFDS 201
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRI 145
L ++K+L+L NP NDIL SK I
Sbjct: 202 LSNIKTLWLQSNPWDCSCNDILYLSKWI 229
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 35 SYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV 92
S +LT +P + D K L L +NK++++ + F + TKL+ L+L NN++ + + V
Sbjct: 46 SSKRLTAIPSNIPADTKKLE---LDYNKLSSLLSKAFQSFTKLTFLSLNNNQLLTLPAGV 102
Query: 93 GD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTVRNDILQD-SKRIISHI 149
D L NL L + N+L +P + L +L L+L N ++++ I +K I +
Sbjct: 103 FDELKNLETLWIQQNQLQTLPVGVFDHLVNLDKLYLYQNQLESLPQGIFDKLTKLTILWL 162
Query: 150 KTSRL 154
T++L
Sbjct: 163 NTNKL 167
>gi|78100684|gb|ABB21163.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 372
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINNMEND 67
L NKL S S F + SLT L+LSYNQL LPV NL L LG N++ ++
Sbjct: 66 LGSNKLSSLSAKAFHSLSSLTFLDLSYNQLQTLPVGVFDHLVNLDKLYLGQNQLRSLPRG 125
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLIN-LAILDLSDNELTDVP 112
F +LTKL+ L L N++ + V D +N L LDL N+L +P
Sbjct: 126 VFDSLTKLTYLTLSENQLQSLPHGVFDQLNDLKTLDLQQNQLKSLP 171
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
LS L LDLS+N+L + + +F + +L +L L NQL LP V LT+L L N
Sbjct: 82 LSSLTFLDLSYNQLQTLPVGVFDHLVNLDKLYLGQNQLRSLPRGVFDSLTKLTYLTLSEN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + F L L L+L+ N++ + + D L L +L L +N+L +P
Sbjct: 142 QLQSLPHGVFDQLNDLKTLDLQQNQLKSLPPKIFDKLTKLTLLYLYNNQLQSLPKGVFDK 201
Query: 118 LFHLKSLFLGGNPIKTV 134
L LK+L LG N +K V
Sbjct: 202 LTELKTLELGSNQLKRV 218
>gi|456862201|gb|EMF80779.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 220
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ + L N+L S LP I +++L EL+LS NQL LP + NL L L N
Sbjct: 24 LQNLERIYLHQNRLTS--LPQEIGQLQNLEELHLSSNQLKTLPKEIEKLHNLQILDLNNN 81
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNLK NK++ + +G L N+ LDLSDN+LT +P E+ L
Sbjct: 82 ELTALPEEIG-QLQNLYGLNLKLNKLTILPKEIGQLQNMGDLDLSDNQLTTLPSEIGQLK 140
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L SL L GN + + +I
Sbjct: 141 KLHSLNLSGNSLTSFPKEI 159
>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
norvegicus]
gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 582
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D L +LS L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RITAVEKDVR-NLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 438
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 439 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 498 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 557
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 558 PQIVAGGPS 566
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 414
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L L +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 415 TKIPEDVS-GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDL 473
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 474 QKLVLTNNQLTTLPRGI 490
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P ++ LTEL L N+L LP C NL L L N + ++ D L KL +L+
Sbjct: 117 PSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLD 175
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L++NK+ E+ S V L +L L L N +T V ++ +L L +L + N IK + +I
Sbjct: 176 LRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEI 234
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
L + L L L+ N + PV + + L + N+IN + F LS LN
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 385
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+K+N+++ + + G ++ L+L+ N+LT +P ++S L L+ L L N +K +
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
>gi|348505484|ref|XP_003440291.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
[Oreochromis niloticus]
Length = 646
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL + F +R L L++ N L ++P+ DC+NL L LG+N
Sbjct: 146 VPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHIRSNSLKIIPMRLFQDCRNLEFLDLGYN 205
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ S+ L NL L L N + + L+
Sbjct: 206 RLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIRSMNQGLTWT 265
Query: 119 FH-LKSLFLGGNPIKTVRNDILQ 140
+ ++ L L GN + V + Q
Sbjct: 266 WASIQKLDLSGNELTEVDAAVYQ 288
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+HL L L HN + S F +R L E+ LS N++T L T NL +L L +N
Sbjct: 98 LNHLIWLYLDHNYIASVDAMAFQGVRRLKEMILSSNKITSLHNTTFHPVPNLRNLDLSYN 157
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
K+ ++ F L KL L++++N + + + D NL LDL N L +
Sbjct: 158 KLQALQPGQFQGLRKLLSLHIRSNSLKIIPMRLFQDCRNLEFLDLGYNRLRSI 210
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 27/129 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKIN 62
L+ LDL +N+L S + F + LTEL+L +NQ + + + NL L L +N+I
Sbjct: 197 LEFLDLGYNRLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIR 256
Query: 63 NMENDYFLT------------------------LTKLSLLNLKNNKISEVSSNVGD-LIN 97
+M T L L LNL +NK++ VS V D I+
Sbjct: 257 SMNQGLTWTWASIQKLDLSGNELTEVDAAVYQCLPNLQTLNLDSNKLTNVSQEVVDAWIS 316
Query: 98 LAILDLSDN 106
L ++ L+ N
Sbjct: 317 LTMISLAGN 325
>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 428
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I +++L LNL NQLT L KNL L L N
Sbjct: 162 LENLQELNLSDNQLTT--LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ +S +G L NL L+LSDN+LT +P E+ L
Sbjct: 220 QLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 279 NLHTLNLSGNQLTTLSIEI 297
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L TL+LS N+L + S+ + +++L +LNL NQLT L KNL L L +N+
Sbjct: 277 LQNLHTLNLSGNQLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L NL L L N L P E+ L +
Sbjct: 336 LVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394
Query: 121 LKSLFLGG 128
L++L+LGG
Sbjct: 395 LQTLYLGG 402
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 254 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 312 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 371 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 405
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 208 LKNLQTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ +S +G L NL L+L N+LT + E+ L
Sbjct: 266 QLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLK 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + + +I Q
Sbjct: 325 NLQTLSLSYNRLVILPKEIGQ 345
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 356
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L +LP I +++L EL LS NQLT+LP KNL L+LG N
Sbjct: 162 LQSLQKLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL NN+++ + +G L L L LS N+LT +P E+ L
Sbjct: 220 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 279 NLQELYLNDNQLTTLPKEIGQ 299
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 26/163 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDL++N+ +LP I +++L ELNL NQL LP +NL L+L N
Sbjct: 70 LQNLKSLDLANNQF--KTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVN 127
Query: 60 K-------INNMEN------DY---------FLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I ++N DY L L LNL N++ + + +G L N
Sbjct: 128 RLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQN 187
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L LS+N+LT +P E+ L +L++L LG N + + +I Q
Sbjct: 188 LQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L +L+TL LS N+L + P I +++L +LNL YNQLT +L ++L L L N
Sbjct: 116 LQNLQTLILSVNRLTT--FPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN+++ + +G L NL L L DN+LT +P E+ L
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+LK L+ N + + +I Q K
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQK 256
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL + K++ + + L NL LDL++N+ +P E+ L +L+ L L N +K +
Sbjct: 52 VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111
Query: 137 DI--LQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVI 194
+I LQ+ + +I + +RL Q + G + N+ K LD + TL + I
Sbjct: 112 EIGQLQNLQTLI--LSVNRLTTFPQEI--GQLK--------NLQKLNLDYNQLTTLLQEI 159
>gi|294828111|ref|NP_712624.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074462|ref|YP_005988779.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
str. IPAV]
gi|293385958|gb|AAN49642.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
str. 56601]
gi|353458251|gb|AER02796.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
str. IPAV]
gi|456825302|gb|EMF73698.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 488
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYN-QLTMLPV-CTDCKNLTHLLLGF 58
L HL+ L L N+L SLP I + R+L L++ N + +LP +NL LLL
Sbjct: 317 LKHLEHLSLGLNQL--KSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQ 374
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + + L KL +LN+ N++ + +G L L +LDLS N LT +P E+ L
Sbjct: 375 NRFKIFPKEIW-ELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 433
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
+L L+L N IKT+ +I
Sbjct: 434 HNLTELYLQYNRIKTLPEEI 453
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNK 60
L +LK L L+ NKL ++ ++ +LT L L N+++ LP + KNL L L N+
Sbjct: 82 LKNLKELYLNGNKLTIVPKEIW-ELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNR 140
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL+NN+I + + +G L NL I +LS N+L +P E+ +L +
Sbjct: 141 LVTLPGEIG-ELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 199
Query: 121 LKSLFLGGNPIKTVRNDI--LQD 141
L+ L+L N +KT+ + LQD
Sbjct: 200 LRMLYLENNQLKTLPRQMEKLQD 222
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--------VCTDCKNLT 52
L +L L L +N++ +LP I+ ++L ELNL N+L LP +
Sbjct: 105 LENLTILRLENNRI--STLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENN 162
Query: 53 HLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ + N+I +EN L + NL NK++ + +G+L NL +L L +N+L +P
Sbjct: 163 RIKILPNEIGALEN--------LWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLP 214
Query: 113 CELSSLFHLKSLFLGGNPI 131
++ L L+ L L NP+
Sbjct: 215 RQMEKLQDLEVLNLLINPL 233
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%)
Query: 73 TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
+ + +L+L K + + +L L IL L +N +T +P E++ L +LK L+L GN +
Sbjct: 37 SNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTLPREINKLKNLKELYLNGNKLT 96
Query: 133 TVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
V +I + I ++ +R+ + ++
Sbjct: 97 IVPKEIWELENLTILRLENNRISTLPKEIE 126
>gi|304268947|dbj|BAJ14926.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 320
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINNME 65
L L N+L + F + LT L L YNQL LPV NL L L N++ ++
Sbjct: 69 LQLDFNQLANIPAEAFHGLTRLTYLALDYNQLQSLPVGVFDQLNNLNELRLQDNQLTSLP 128
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LTKL+ L L N++ + + V D L NL L+LS N+L VP SL +L++
Sbjct: 129 PGVFDSLTKLTYLTLSQNQLQSIPAGVFDKLTNLNRLELSTNQLQSVPHGAFDSLVNLET 188
Query: 124 LFLGGNPIKTVRNDIL 139
L L NP +DI+
Sbjct: 189 LHLELNPWDCACSDII 204
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 17 SDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
+DS P +D S +LT +P N L L FN++ N+ + F LT+L+
Sbjct: 41 TDSSPETVDCSS--------KKLTAVPTGIP-ANTEKLQLDFNQLANIPAEAFHGLTRLT 91
Query: 77 LLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
L L N++ + V D L NL L L DN+LT +P + SL L L L N ++++
Sbjct: 92 YLALDYNQLQSLPVGVFDQLNNLNELRLQDNQLTSLPPGVFDSLTKLTYLTLSQNQLQSI 151
Query: 135 RNDIL 139
+
Sbjct: 152 PAGVF 156
>gi|253401401|gb|ACT31457.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 250
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + S +F D+ L L L+ NQL LP V L L LG N
Sbjct: 57 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 116
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ + LTKL L L N++ + + D L NL L LS N+L VP
Sbjct: 117 QLKSLPSGVVDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 176
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+++ L GN R +IL S+ I + + DG G + ES +
Sbjct: 177 LGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVK--------DGTGQNLHESPDGVTC 228
Query: 178 DKYKLDRTKT 187
K+ RT T
Sbjct: 229 SDGKVVRTVT 238
>gi|224613228|gb|ACN60193.1| Leucine-rich repeat-containing protein 47 [Salmo salar]
Length = 563
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L LK LD+S N L ++LP I + L LN+S N + LP +C C L+ + +
Sbjct: 94 LKSLKVLDISVNNL--NALPEEITQLSDLNTLNVSCNNIESLPDGLC-HCTKLSTINISK 150
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I +D++ L LS + N I E+S +V L L +LDLS+N+L+D+P ELS
Sbjct: 151 NDITRFPDDFY-RLDLLSTVIASENAIEELSGDVLKLSALKVLDLSNNKLSDIPYELSDC 209
Query: 119 FHLKSLFLGGNPIKTVR 135
LK + GN +K R
Sbjct: 210 SKLKEINFKGNKLKDKR 226
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L+ L L NK+S + +G+L +L +LD+S N L +P E++ L L +L + N I
Sbjct: 71 LTTLTSLILCRNKLSSIPKTIGNLKSLKVLDISVNNLNALPEEITQLSDLNTLNVSCNNI 130
Query: 132 KTVRNDILQDSKRIISHIKTSRL-----DYHCQNVDGGGMSSQESTSEINIDKYKLDRTK 186
+++ + + +K +I + + D++ ++ ++S+ + E++ D KL K
Sbjct: 131 ESLPDGLCHCTKLSTINISKNDITRFPDDFYRLDLLSTVIASENAIEELSGDVLKLSALK 190
Query: 187 TLTLC--KVINIP 197
L L K+ +IP
Sbjct: 191 VLDLSNNKLSDIP 203
>gi|224114980|ref|XP_002316909.1| predicted protein [Populus trichocarpa]
gi|222859974|gb|EEE97521.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 23 FIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
F + L L+L N++ T+ P C +L +G N ++ + + L++L L+L
Sbjct: 203 FGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEIG-ALSRLGTLDLH 261
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQD 141
+N++ E+ + L L++LDLS+N LT +P EL + L+ L L GNP++T+R+ ++
Sbjct: 262 SNQLKEIPAEACKL-QLSMLDLSNNSLTGLPPELGKMTTLRKLLLNGNPLRTLRSSLVSG 320
Query: 142 SKRIISHIKTSRL 154
+ + SRL
Sbjct: 321 PTATLLNYLRSRL 333
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
L +L L L +N L F + L L+LS N ++L P + +L L L
Sbjct: 423 LPNLICLKLDNNALTQIPSDGFQAVPMLQILDLSGNPASLLGHPAFSSLPHLKELYLRQV 482
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL- 118
++ + +D L+L +L +LNL N + + + +L +L LDLSDN ++ +P EL L
Sbjct: 483 QLREIPSD-ILSLQQLQILNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPELGLLE 541
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRII 146
L++L L GNP++++R IL + +
Sbjct: 542 PSLQALRLDGNPLRSIRRTILDRGTKAV 569
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 28 SLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
+L++L S N +T LP C LT + + NK+ + + + T L+ N N +S
Sbjct: 138 ALSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLMASWTMLTEFNASKNLLS 197
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ N G L L LDL N ++ +P + L ++G N + T+ +I
Sbjct: 198 DIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEI 249
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFNKIN 62
L+ L L+HN + + L ++ LT LN+S+N+L+ LP + LL + FN I
Sbjct: 46 ELQKLILAHNNIEAIKEDLK-NLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQ 104
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D + T L + +N++ E+ S++G + L+ L S+N +T +P +L+ L
Sbjct: 105 KVP-DEIGSATSLVKFDCSSNQLRELPSSLGGCLALSDLKASNNSITSLPEDLARCSKLT 163
Query: 123 SLFLGGNPIKTVRNDIL 139
+ + GN +K + +++
Sbjct: 164 KVDVEGNKLKVLSGNLM 180
>gi|320170618|gb|EFW47517.1| proto-oncogene tyrosine-protein kinase LCK [Capsaspora owczarzaki
ATCC 30864]
Length = 762
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L L +N++ S F + +L L L YNQ+T +P T LTHL LG N
Sbjct: 46 LTALAELSLDYNQITSVPDDAFTGLTALVSLTLDYNQITSVPDDAFTGLTALTHLSLGNN 105
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-------------------------SSNVGD 94
+I ++ F LT L+ L+L NN+I + SS+
Sbjct: 106 QITSVPAGAFTGLTALTALSLGNNQIISISADAFTDLTALTALLLDSNAIIGIPSSSFTG 165
Query: 95 LINLAILDLSDNELTDVP-CELSSLFHLKSLFLGGNPIKTVRNDILQ 140
L L L L N++T +P + L L +L L NPI T+ + +
Sbjct: 166 LTALTYLHLDGNQITSIPDSSFTGLTALITLALNDNPITTLPPGLFK 212
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 12 HNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYF 69
HN++ F M +LT L + NQ+T +P V L L L +N+I ++ +D F
Sbjct: 8 HNQITGIPAGAFTGMTALTNLYMHRNQITSIPESVFAGLTALAELSLDYNQITSVPDDAF 67
Query: 70 LTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSSLFHLKSLFLG 127
LT L L L N+I+ V + L L L L +N++T VP + L L +L LG
Sbjct: 68 TGLTALVSLTLDYNQITSVPDDAFTGLTALTHLSLGNNQITSVPAGAFTGLTALTALSLG 127
Query: 128 GNPIKTVRNDIL 139
N I ++ D
Sbjct: 128 NNQIISISADAF 139
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
++ L L + N++ S +F + +L EL+L YNQ+T +P T L L L +N
Sbjct: 22 MTALTNLYMHRNQITSIPESVFAGLTALAELSLDYNQITSVPDDAFTGLTALVSLTLDYN 81
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
+I ++ +D F LT L+ L+L NN+I+ V + L L L L +N++ +
Sbjct: 82 QITSVPDDAFTGLTALTHLSLGNNQITSVPAGAFTGLTALTALSLGNNQIISI 134
>gi|227874840|ref|ZP_03992993.1| possible leucine-rich repeat-containing protein [Mobiluncus
mulieris ATCC 35243]
gi|306818136|ref|ZP_07451867.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
35239]
gi|227844615|gb|EEJ54771.1| possible leucine-rich repeat-containing protein [Mobiluncus
mulieris ATCC 35243]
gi|304649100|gb|EFM46394.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
35239]
Length = 241
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+TL L N+L S P I +++L L L NQLT +P +NL L L
Sbjct: 10 QLQNLQTLYLWKNQLTS--FPKEISQLQNLQHLYLGENQLTSIPKEIRQLQNLQTLNLWR 67
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L L L++NK++ + +G L NL LDL+ N+LT +P E+ L
Sbjct: 68 NQLTSFPTE-ILQLQNLQHLVLRDNKLTSIPKEIGQLQNLTSLDLAGNKLTSIPKEIRQL 126
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + + +ILQ
Sbjct: 127 QNLQTLNLWRNQLTSFPTEILQ 148
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+TL+L N+L S P I +++L L L N+LT +P +NLT L L
Sbjct: 56 QLQNLQTLNLWRNQLTS--FPTEILQLQNLQHLVLRDNKLTSIPKEIGQLQNLTSLDLAG 113
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ ++ + L L LNL N+++ + + L NL L L DN+LT +P E+S L
Sbjct: 114 NKLTSIPKE-IRQLQNLQTLNLWRNQLTSFPTEILQLQNLQHLSLGDNKLTSIPTEISQL 172
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGG 164
+L+ L+L N + ++ +I Q +++ ++L N+ G
Sbjct: 173 KNLQYLYLEDNKLTSIPKEISQLQNLQYLNLQDNKLKAELWNLPKG 218
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ + + L NL L L N+LT P E+S L +L+ L+LG N + ++ +I Q
Sbjct: 1 MTSIPKEISQLQNLQTLYLWKNQLTSFPKEISQLQNLQHLYLGENQLTSIPKEIRQ 56
>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 428
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I +++L LNL NQLT L KNL L L N
Sbjct: 162 LENLQELNLSDNQLTT--LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ +S +G L NL L+LSDN+LT +P E+ L
Sbjct: 220 QLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 279 NLHTLNLSGNQLTTLSIEI 297
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFNK 60
L +L TL+LS N+L + S+ + +++L +LNL NQLT L KNL L L +N+
Sbjct: 277 LQNLHTLNLSGNQLTTLSIEIG-KLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 335
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L LNL NN+++ + +G L NL L L N L P E+ L +
Sbjct: 336 LVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394
Query: 121 LKSLFLGG 128
L++L+LGG
Sbjct: 395 LQTLYLGG 402
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 254 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 312 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 371 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 405
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L LNLS NQLT L + +NL L L N
Sbjct: 208 LKNLQTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ +S +G L NL L+L N+LT + E+ L
Sbjct: 266 QLTTLPIEIG-KLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLK 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + + +I Q
Sbjct: 325 NLQTLSLSYNRLVILPKEIGQ 345
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|224613382|gb|ACN60270.1| Leucine-rich repeat-containing protein 47 [Salmo salar]
Length = 564
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
L LK LD+S N L ++LP I + L LN+S N + LP +C C L+ + +
Sbjct: 95 LKSLKVLDISVNNL--NALPEEITQLSDLNTLNVSCNNIESLPDGLC-HCTKLSTINISK 151
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N I +D++ L LS + N I E+S +V L L +LDLS+N+L+D+P ELS
Sbjct: 152 NDITRFPDDFY-RLDLLSTVIASENAIEELSGDVLKLSALKVLDLSNNKLSDIPYELSDC 210
Query: 119 FHLKSLFLGGNPIKTVR 135
LK + GN +K R
Sbjct: 211 SKLKEINFKGNKLKDKR 227
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L+ L L NK+S + +G+L +L +LD+S N L +P E++ L L +L + N I
Sbjct: 72 LTTLTSLILCRNKLSSIPKTIGNLKSLKVLDISVNNLNALPEEITQLSDLNTLNVSCNNI 131
Query: 132 KTVRNDILQDSKRIISHIKTSRL-----DYHCQNVDGGGMSSQESTSEINIDKYKLDRTK 186
+++ + + +K +I + + D++ ++ ++S+ + E++ D KL K
Sbjct: 132 ESLPDGLCHCTKLSTINISKNDITRFPDDFYRLDLLSTVIASENAIEELSGDVLKLSALK 191
Query: 187 TLTLC--KVINIP 197
L L K+ +IP
Sbjct: 192 VLDLSNNKLSDIP 204
>gi|260806259|ref|XP_002598002.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
gi|229283272|gb|EEN54014.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
Length = 489
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L HN L LP I + +L +N+SYN+L LP + KNL +L L +N
Sbjct: 44 LQKLRELNLDHNLLTQ--LPQAITTLPNLQRINVSYNKLEALPDGISRLKNLQYLDLSWN 101
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ D L +L+ L++ N+ + V + +L N+ LDLS N ++ +P LS L
Sbjct: 102 GLESLP-DGVGELEQLTCLHITGNRFTSVPDTIMNLSNIEKLDLSRNRISRLPLTLSRLA 160
Query: 120 HLKSLFLGGNPI 131
LK + + GNP+
Sbjct: 161 KLKDMNITGNPL 172
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L T+DLS L S +F D + L LS N+LT +P + L L L N +
Sbjct: 1 LLTIDLSGKGLTSVPAEVF-DATDIECLVLSNNRLTSIPKEIGQLQKLRELNLDHNLLTQ 59
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ TL L +N+ NK+ + + L NL LDLS N L +P + L L
Sbjct: 60 LPQ-AITTLPNLQRINVSYNKLEALPDGISRLKNLQYLDLSWNGLESLPDGVGELEQLTC 118
Query: 124 LFLGGNPIKTVRNDILQDS---KRIISHIKTSRL 154
L + GN +V + I+ S K +S + SRL
Sbjct: 119 LHITGNRFTSVPDTIMNLSNIEKLDLSRNRISRL 152
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
++L+ LT +P D ++ L+L N++ ++ + L KL L LKNN ++++
Sbjct: 208 IDLNGKGLTSVPAEVFDATDVERLVLSNNRLTSIPEEIG-QLQKLRELKLKNNLLTQLPQ 266
Query: 91 NVGDLINLAILDLSDNEL----------------------TDVPCELSSLFHLKSLFLGG 128
+ L NL +D++DN+L +P E+ SL L + ++G
Sbjct: 267 VISTLPNLQHIDVTDNKLETLPGGISRLQLHELYVPNNRFKKIPEEVCSLLQLNTFYVGY 326
Query: 129 NPIKTVRNDILQDSKRIISHIKTSRLDYHCQNV 161
NP+K + I Q + H+ + D + V
Sbjct: 327 NPLKCFPDKISQLTGLRKMHMSRCQFDEFPRQV 359
>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 368
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN+++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 346 NLQTLYLNNN 355
>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 285
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L + +TL LS N+L + LP I +++L EL L+ NQ T P KNL L L
Sbjct: 90 QLQNFQTLVLSKNRLTT--LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 147
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L+L N++ V G L NL +L L+ N+LT +P E+ L
Sbjct: 148 NQLKTLPNEIG-QLKNLRELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 206
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N +KT+ +I Q
Sbjct: 207 KNLRELHLSYNQLKTLSAEIGQ 228
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGF 58
L +L+ L+L N+L +LP I +++L EL+LSYNQL +P T KNL L L
Sbjct: 136 QLKNLQQLNLYANQL--KTLPNEIGQLKNLRELHLSYNQLKTVPEETGQLKNLQMLSLNA 193
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL 115
N++ + N+ L L L+L N++ +S+ +G L NL L L DN+LT +P E+
Sbjct: 194 NQLTTLPNE-IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 249
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L +L+ L+L N+L + LP I +++ L LS N+LT LP KNL L L
Sbjct: 67 QLQNLQWLNLVTNQLTT--LPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNT 124
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+ + L L LNL N++ + + +G L NL L LS N+L VP E L
Sbjct: 125 NQFTAFPKEIG-QLKNLQQLNLYANQLKTLPNEIGQLKNLRELHLSYNQLKTVPEETGQL 183
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ N+I Q
Sbjct: 184 KNLQMLSLNANQLTTLPNEIRQ 205
>gi|47214774|emb|CAG01040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 626
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL + F +R L L++ N L ++P+ DC+NL L LG+N
Sbjct: 233 VPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHIRSNSLKIIPMRLFQDCRNLEFLDLGYN 292
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ S+ L NL L L N + + L+
Sbjct: 293 RLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIRSMSQGLTWT 352
Query: 119 FH-LKSLFLGGNPIKTVRNDILQ 140
+ ++ L L GN + V + Q
Sbjct: 353 WASIQKLDLSGNDLTEVDAAVYQ 375
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKI 61
+L+ LDL +N+L S + F + LTEL+L +NQ + + + NL L L +N+I
Sbjct: 283 NLEFLDLGYNRLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRI 342
Query: 62 NNMENDYFLT------------------------LTKLSLLNLKNNKISEVSSNVGD-LI 96
+M T L L LNL +NK++ VS +V D I
Sbjct: 343 RSMSQGLTWTWASIQKLDLSGNDLTEVDAAVYQCLPNLQTLNLDSNKLTNVSQDVVDAWI 402
Query: 97 NLAILDLSDN 106
+L + L+ N
Sbjct: 403 SLTTISLAGN 412
>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 379
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L NKL LP I +++L LNL N+LT+LP +NL L L N
Sbjct: 139 LQNLQVLNLDLNKLTI--LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +LN + N+++ +G L L L L N+LT +P E+ L
Sbjct: 197 KLTILP-EKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 255
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+LG NP++T+ +I Q K
Sbjct: 256 KLQELYLGNNPLRTLPKEIEQLQK 279
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L+L N+L + D + +++L LNL N+LT+LP +NL L L
Sbjct: 116 LQNLQVLNLGFNRLTILPDEVG---QLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NK+ + + L L +LNL NK++ + +G L NL IL+ N+LT P E+ L
Sbjct: 173 NKLTILP-EKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQL 231
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSK 143
L+ L+L GN + T+ +I Q K
Sbjct: 232 SKLQKLYLYGNQLTTLPEEIGQLKK 256
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+ N+L + P I + L +L L NQLT LP K L L LG N
Sbjct: 208 LQNLQILNSQGNQLTT--FPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L KL L L+ N+I+ +G L NL L+L N+LT +P E+ L
Sbjct: 266 PLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + T+ ++ Q K
Sbjct: 325 NLQELNLEFNQLATLPKEVGQLQK 348
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LS L+ L L N+L + LP I ++ L EL L N L LP + L L L N
Sbjct: 231 LSKLQKLYLYGNQLTT--LPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + L L LNL N+++ + +G L NL L+L N+L +P E+ L
Sbjct: 289 QITTFPKEIG-QLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ 347
Query: 120 HLKSLFLGGNPIKTVR 135
L+ L L NPI + +
Sbjct: 348 KLRKLNLYNNPIASEK 363
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 26/143 (18%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP---------------------- 43
+ L+LS +KL + S + +++L +L L+YNQLT LP
Sbjct: 51 RILNLSGSKLATLSKEIG-KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTIL 109
Query: 44 --VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL 101
+NL L LGFN++ + D L L +LNL NK++ + +G L NL +L
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILP-DEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 168
Query: 102 DLSDNELTDVPCELSSLFHLKSL 124
+L N+LT +P ++ L +L+ L
Sbjct: 169 NLDLNKLTILPEKIGQLQNLQVL 191
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L L N+++ + + +G L NL +LDL NELT +P E+ L +L+ L LG N
Sbjct: 70 LQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFN-- 127
Query: 132 KTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKL 182
R IL D + +++ LD + + + ++ +N+D KL
Sbjct: 128 ---RLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKL 175
>gi|383859012|ref|XP_003704992.1| PREDICTED: protein toll-like [Megachile rotundata]
Length = 1072
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
LK L LS N L + S LF D+ +T L+L N + + P + + L L LG N ++
Sbjct: 140 LKWLILSSNGLTNLSSDLFADVPHITWLDLRENNVRLYPGIFNNTPELQVLELGNNMMSQ 199
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHL 121
+E + F LTKL LLNL NK +E+ + D L++L LDL+ N LT +P + + L++L
Sbjct: 200 IEPNVFDPLTKLELLNLWLNKFTELKPGIFDKLVSLTSLDLNSNYLTTLPENIFAKLYNL 259
Query: 122 KSLFLGGN 129
K+L L N
Sbjct: 260 KTLSLYSN 267
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNK 60
S LK L + N LVS +F + L EL+LS+N+L LP + D + +L L N+
Sbjct: 330 SSLKNLTVDSNYLVSLPKRIFEGLHELLELDLSFNRLISLPDGIFLDATKMVYLNLQGNR 389
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELT 109
++ F L L+ LN++ N++ + + + NL I S+N+LT
Sbjct: 390 FTSISRGLFSNLKSLTFLNMEGNQLQTIQDRSFSSMTNLRIAKFSNNQLT 439
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L LDLS N+L+S +F+D + LNL N+ T + + ++ K+LT L + N
Sbjct: 353 LHELLELDLSFNRLISLPDGIFLDATKMVYLNLQGNRFTSISRGLFSNLKSLTFLNMEGN 412
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS---------SNVGDLINLAILDLSDNELTD 110
++ +++ F ++T L + NN+++ S S D ++ L LS N +T+
Sbjct: 413 QLQTIQDRSFSSMTNLRIAKFSNNQLTFSSPFEDEFGKKSPFYDCTSIEELHLSHNNITE 472
Query: 111 V 111
+
Sbjct: 473 I 473
>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
Length = 584
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 1 MLSHLKTLDLSHNKLVS---------------------DSLPLFIDM-RSLTELNLSYNQ 38
ML+ LKTLD+SHN ++ LP I + L EL LS N
Sbjct: 89 MLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNNQIKELPSTIGLCVDLAELKLSNNG 148
Query: 39 LTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
LT LP C L L + NKI + F +L L+ LN N I+E+ +G+L
Sbjct: 149 LTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTR 208
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L LDL N++ +P L + L + G N + ++ N+I
Sbjct: 209 LLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEI 249
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 28/165 (16%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFN 59
S L +L + NK+ LF + +LTELN N +T LP + NLT LL L N
Sbjct: 160 SRLISLSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELP--EEIGNLTRLLRLDLHQN 217
Query: 60 KINNMEND----------YFL------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
KI ++ + YF L L +L N++SE + +
Sbjct: 218 KIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSM-R 276
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDS 142
L++LDLS+N L+ +P EL + L+ L L GNP++T+R ++ S
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGS 321
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLS--YNQLTMLPVCTDCKNLTHLLLGFN 59
L +LK L+L+ N +V+ F + +L L+LS QL P + L L L
Sbjct: 426 LPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLPPPPCLSLMTGLQELRLMRT 485
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV--SSNVGDLINLAILDLSDNELTDVPCELSS 117
++ + D ++ L +L+L N IS + +S + I L LDL+DN L+ +P +L
Sbjct: 486 QMAAIPWD-LPRMSSLRILDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPPQLGY 544
Query: 118 LFH-LKSLFLGGNPIKTVRNDILQDSKR 144
L L+ L + GNP++++R IL+ +
Sbjct: 545 LEPTLRKLKVDGNPLRSIRRGILERGTK 572
>gi|297819320|ref|XP_002877543.1| hypothetical protein ARALYDRAFT_905940 [Arabidopsis lyrata subsp.
lyrata]
gi|297323381|gb|EFH53802.1| hypothetical protein ARALYDRAFT_905940 [Arabidopsis lyrata subsp.
lyrata]
Length = 994
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL--TMLPVCTDCKNLTHLLLGF 58
LS L L L N++ S +P FI + LTEL+LSYN + P +C+ L HL + +
Sbjct: 414 LSDLGLLSLYSNRM-SGEIPSFIGNFSRLTELDLSYNNFDGVVPPSLGNCRILLHLWIEY 472
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELS 116
NK+N + ++ L L++ N +S + +VG L NL L+++ N+L+ +P +L
Sbjct: 473 NKLNGTIPREIMQISSLVNLSMAGNSLSGSLPKDVGRLQNLVTLNVAHNKLSGKLPLDLG 532
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
+ F L+ L+L GN DI
Sbjct: 533 TCFSLEELYLQGNYFDGTIPDI 554
>gi|304269074|dbj|BAJ14989.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 222
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
++ + L+L +N+L S S F + LT L LS N+L LPV +NL L L N+
Sbjct: 40 ANTERLELQYNQLTSISGKAFHGLTRLTFLGLSDNKLPSLPVGVFDQLENLQDLRLYNNQ 99
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSL 118
+ ++ F +LTKL++L L +N++ + + V D L NL LDL N+L VP +L
Sbjct: 100 LKSLPPRVFDSLTKLTILQLNDNQLQSIPAGVFDKLTNLNRLDLFANQLQSVPHGAFDNL 159
Query: 119 FHLKSLFLGGNPIKTVRNDIL 139
L++ LG NP +DI+
Sbjct: 160 TKLETTTLGNNPWDCACSDII 180
>gi|238491782|ref|XP_002377128.1| RAM signalling pathway protein domain-containing protein
[Aspergillus flavus NRRL3357]
gi|317146192|ref|XP_001821351.2| RAM signalling pathway protein domain-containing protein
[Aspergillus oryzae RIB40]
gi|220697541|gb|EED53882.1| cell morphogenesis protein Sog2, putative [Aspergillus flavus
NRRL3357]
gi|391869194|gb|EIT78396.1| hypothetical protein Ao3042_05387 [Aspergillus oryzae 3.042]
Length = 985
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTE-LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNM 64
T+DL H+ +V P+ ++ E L+LS NQL +P +C +L +L + N
Sbjct: 124 TIDLGHSNIVRIPEPVVDIIKDEVERLSLSGNQLFHIPYRFAECSHLRYLNIRANNFREF 183
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSL 124
+ L L +L+L NKIS++ + L +L +L + N L D+P +S + L+ L
Sbjct: 184 PKGVY-KLPLLEILDLSRNKISQLPEEIKKLSSLRVLSVMQNRLDDLPLGVSDMNKLQIL 242
Query: 125 FLGGNPIKTVRNDILQDSKRIIS 147
+ GNP++ ++L+ S+ I+
Sbjct: 243 KVAGNPLRNPLRELLETSETDIA 265
>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
Length = 2303
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLF-IDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
+ L+ L LS+N L P+ +D+ SL LNL N+LT +P C + L L N
Sbjct: 305 MKFLRHLSLSNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLSAEGN 364
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L + +L LKNN+I +V+ +V +L + LDLS+N L + + +
Sbjct: 365 RIRVLPEE-IAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMR 423
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
H++SL L N + + R ISH++
Sbjct: 424 HMESLDLSKNRVIKI--------PREISHLR 446
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
L+ LDLS N L +P + DM SL LN+S N++ ++ +C +L L + N +
Sbjct: 907 LEVLDLSDNGL--RFVPREVTDMLSLQTLNISRNRIKVIGDRMCQ-LDSLVDLDISRNSV 963
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
++ + L L + L +N IS + +V +L NL LDL N+L VP ++ SL L
Sbjct: 964 TSIPENICL-LANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGSLSQL 1022
Query: 122 KSLFLGGNPIKTV 134
+ L L GN I V
Sbjct: 1023 RVLLLSGNKIAYV 1035
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGF 58
ML L+ LDLS NK+ +P + ++ +L +N+ N +T L P+C K L L +G
Sbjct: 582 MLKELQVLDLSDNKI--RRIPAQLGEISTLQSVNVERNWVTDLTPICR-LKYLETLNIGS 638
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ + + L++L L +N+++ + G L L +LDL+ N + +P SSL
Sbjct: 639 NGLYSLPGN-LVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLTKNNIESLPDSFSSL 697
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
L L L N + + ++
Sbjct: 698 NALSVLRLASNDMSSFPTEV 717
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 2 LSHLKTLDLSHN------------------KLVSDSLPLF----IDMRSLTELNLSYNQL 39
LS LK LDL+ N +L S+ + F + +LT+++LS N++
Sbjct: 674 LSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKI 733
Query: 40 TMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
LP +N+ L L NK+ + +D+ +T L L+L +++V + L L
Sbjct: 734 PSLPFGVGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEEL 793
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDS 142
L++S N+L +P E+ L L+ L N +K + D +Q+S
Sbjct: 794 EYLNISSNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQES 837
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL---LLG 57
+L++++ L SHN +S + ++ +L L+L +NQL +P TD +L+ L LL
Sbjct: 972 LLANMERLTASHNN-ISSIIRDVCELPNLEYLDLRHNQLEKVP--TDIGSLSQLRVLLLS 1028
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
NKI + +L LL+L N ++ + S+V +L +L L++N++ VP +S
Sbjct: 1029 GNKIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISR 1088
Query: 118 LFHLKSLFLGGNPIKTV 134
L L L GN I V
Sbjct: 1089 ATGLTELQLRGNRIFVV 1105
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+L +++ L+LS NKL D M SL L+LS +T +P + + L +L + N
Sbjct: 742 LLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNISSN 801
Query: 60 KINNMENDYF----------------------LTLTKLSLLNLKNNKISEVSSNVGDLIN 97
K+ + ++ F + + + L L N + E+S N+ L+
Sbjct: 802 KLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNINTLMY 861
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
L LDLS N L D+P LS L L+ L L GN ++
Sbjct: 862 LERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLR 896
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +LK L+LS N++V S +R+L EL+LS L +P + +L L + N
Sbjct: 79 LRNLKVLNLSGNRIVEYSF--LSKLRTLVELDLSNQNLRSIPEEVFNIHSLEILRVANNG 136
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISE---------------------VSSNVGDLINLA 99
I + L L L +L++ N+IS + V L L
Sbjct: 137 ITEIPKS-ILKLKGLRILDVSGNRISSFPISTLGTLKELYISRVQLQTIPEEVFALEELE 195
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+LD+S+N++ +P +L L+ L+ L LGGN
Sbjct: 196 VLDISNNKVKYLPVKLGKLYRLRVLKLGGN 225
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGFNKINN 63
LKTL L +L LF ++ +L L++S N + +P T +NL L +L N++
Sbjct: 494 LKTLSLDGCRLSGLPRELF-ELPNLEVLDISDNDIRTIP--TAIENLKKLKVLRANRLFL 550
Query: 64 MENDY-FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
Y L L KL L L+ N+I ++S ++ L L +LDLSDN++ +P +L + L+
Sbjct: 551 DSVPYSILGLCKLRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQ 610
Query: 123 SL 124
S+
Sbjct: 611 SV 612
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 31/169 (18%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNM 64
L+ L++ +N +++ LP +RSLT L+ + N ++ L + +L L N I +
Sbjct: 1253 LRVLNVRNNAIMA--LPNIGHLRSLTSLDATANSISDLVDLCNASDLRVLKADNNLITEV 1310
Query: 65 ENDYFLTLTKLSLLNLKNNKI-----------------------SEVSSNVGDLINLAIL 101
D L + LL+L N + +EV VG+L L +
Sbjct: 1311 P-DEIAKLEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSI 1369
Query: 102 DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
+L DNEL D P L L HL ++ L GN + DI+ D R +K
Sbjct: 1370 ELKDNELADFPDVLLYLPHLANVALDGNKL-----DIIPDEVRRFESLK 1413
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 23 FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+ ++ L L++S N+++ P+ T L L + ++ + + F L +L +L++ N
Sbjct: 144 ILKLKGLRILDVSGNRISSFPIST-LGTLKELYISRVQLQTIPEEVF-ALEELEVLDISN 201
Query: 83 NKISEVSSNVGDLINLAIL----------------------DLSDNELTDVPCELSSLFH 120
NK+ + +G L L +L DLSD L +P E L +
Sbjct: 202 NKVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQCLEELDLSDMRLKSIPKEAFYLTN 261
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK+L L N I+T+ DI
Sbjct: 262 LKTLKLNNNKIRTIPADI 279
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
M + L+L N LT +P + +NL L L N+I +E + L L L+L N
Sbjct: 56 MEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRI--VEYSFLSKLRTLVELDLSNQN 113
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
+ + V ++ +L IL +++N +T++P + L L+ L + GN I +
Sbjct: 114 LRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISS 162
>gi|297845790|ref|XP_002890776.1| hypothetical protein ARALYDRAFT_473063 [Arabidopsis lyrata subsp.
lyrata]
gi|297336618|gb|EFH67035.1| hypothetical protein ARALYDRAFT_473063 [Arabidopsis lyrata subsp.
lyrata]
Length = 996
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFN 59
S L+ LD+S N+ S LP + + L EL + +N + +P +DCK+LT + L +N
Sbjct: 348 SPLRWLDVSENEF-SGELPADLCAKGELEELLIIHNTFSGAIPESFSDCKSLTRIRLAYN 406
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKIS-EVSSNVGDLINLAILDLSDNELTD-VPCELSS 117
+ + F L ++LL L NN S E+S ++G NL++L LS+NE T +P E+ S
Sbjct: 407 RFSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNNEFTGSLPEEIGS 466
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG---GGMSSQESTSE 174
L +L L GN L DS + + T LD H G G+ S + +E
Sbjct: 467 LDNLNQLSASGNKFSGS----LPDSLMKLGELGT--LDLHGNQFSGELTSGIKSWKKLNE 520
Query: 175 INI 177
+N+
Sbjct: 521 LNL 523
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTH---LLLGF 58
+L+ L L +N L P ++ SL LNLSYN + + NLT+ + L
Sbjct: 155 FENLEVLSLVYNLLDGTIPPFLGNISSLKMLNLSYNPFKPSRIPPELGNLTNIEVMWLTE 214
Query: 59 NKINNMENDYFLTLTKLSLLNLK-NNKISEVSSNVGDLINLAILDLSDNELT-DVPCELS 116
+ D L+KL L+L N+ + + ++G L N+ ++L +N LT ++P EL
Sbjct: 215 CHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELG 274
Query: 117 SLFHLKSL 124
+L L+ L
Sbjct: 275 NLKSLRLL 282
>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
Length = 844
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNK 60
L L+ LDL+HN+L + P D L+ L+ S NQ+ +P ++L +L NK
Sbjct: 555 LRQLQHLDLAHNELTALP-PKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNK 613
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSLF 119
+ ++ D F TL++L+ L+L N++ E+ ++ D L +L +L+ S N++T +P ++ L+
Sbjct: 614 LTSLP-DNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLY 672
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
++ L L N IK + DI +
Sbjct: 673 RIQVLNLSANVIKALPGDIWR 693
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
L TL SHN+L LP I ++R + L+LS N+LT LP ++ L L N+++
Sbjct: 276 LVTLHASHNRLTQ--LPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQLS 333
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
++E L KL LN N ++ + VG L++L +LD++ NE+ ++P ++ L HLK
Sbjct: 334 SLE--RLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLK 391
Query: 123 SLFLGGNPIKTVRNDILQD 141
++ + N ++T+ + + D
Sbjct: 392 NVDVSHNKLETLPDTLGDD 410
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 25/156 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
++L LD S+N+ V + +P + +RSL LN S N+LT LP LT L L N+
Sbjct: 578 FAYLSHLDTSNNQ-VEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQ 636
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEV---------------SSNV-----GDLI---N 97
+ + ND L L +LN N+++ + S+NV GD+ +
Sbjct: 637 LPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKS 696
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
L LDLSDN L +P ++ L +KS+ + N +++
Sbjct: 697 LTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRS 732
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 31/149 (20%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L HLK +D+SHNKL ++LP D + L+ LN S+N LT LP
Sbjct: 387 LRHLKNVDVSHNKL--ETLPDTLGDDQLLSRLNASHNALTALPT---------------- 428
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
NM L L L++ NK+ + L +L+ LD+SDN+L P L++
Sbjct: 429 --NMRK-----LRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKL---PV-LTAPRS 477
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHI 149
L L + GNP++ + + D+K +I I
Sbjct: 478 LTCLKVAGNPLR-LPTRVAGDNKSLIVRI 505
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L +L+LSHN+L D +P I +R L L+LS+NQL LP D NL H L+
Sbjct: 226 LQRLVSLNLSHNQL--DCIPPTIGTLRYLEFLDLSHNQLDFLP--DDICNLRHCLVT--- 278
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L+ +N+++++ + +L + +LDLS+N+LT +P +
Sbjct: 279 -----------------LHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDS 321
Query: 121 LKSLFLGGN 129
+ SL L N
Sbjct: 322 VVSLDLSHN 330
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 29/139 (20%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDY---FLTLTKLSLLNLK 81
D+RSLTEL++S +LT LP T C NL L FN NN N F L +L L+L
Sbjct: 508 DLRSLTELDISNIELTTLP-TTIC-NL-RFLEKFNARNNKLNSLPANFHRLRQLQHLDLA 564
Query: 82 NNKISEVSSNVGDLINLAILD-----------------------LSDNELTDVPCELSSL 118
+N+++ + +GD L+ LD S+N+LT +P +L
Sbjct: 565 HNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTL 624
Query: 119 FHLKSLFLGGNPIKTVRND 137
L +L L N + + ND
Sbjct: 625 SQLTTLDLSANQLPELPND 643
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNME 65
+LDLSHN+L SL + L LN SYN LT LP +L L + N+I M
Sbjct: 324 SLDLSHNQL--SSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMP 381
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
L L +++ +NK+ + +GD L+ L+ S N LT +P + L L +L
Sbjct: 382 AKIG-GLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALD 440
Query: 126 LGGNPIKTV 134
+ N ++ +
Sbjct: 441 VSRNKLEAL 449
>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 498
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++TLDL + KL LP I +++L L+LS+N LT+LP +NL L L FN +
Sbjct: 50 VRTLDLRYQKLTI--LPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L LNL + K++ + +G L NL LDLS N LT +P E+ L +L+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 167 RLDLHQNRLATLPMEIGQ 184
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP + + +L LNL+ +LT LP +NL L L FN
Sbjct: 93 LRNLQELDLSFNSLTT--LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L N+++ + +G L NL LDL+ N+LT +P E+ L
Sbjct: 151 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 210 NLQELDLHRNQLTTLPKEIGQ 230
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LKTL+L +L + LP I ++++L LNL NQLT LP + +NL L+L N
Sbjct: 231 LQNLKTLNLIVTQLTT--LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L+L N+++ + +G L NL LDL N+LT +P E+ L
Sbjct: 289 RITALPKEIG-QLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 348 NLQELCLDENQLTTLPKEIEQ 368
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 208 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 266 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 325 NLQRLDLHQNQLTTLPKEIGQ 345
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 116 LENLQRLNLNSQKLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 174 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 233 NLKTLNLIVTQLTTLPKEI 251
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L+L NQLT+LP +NL L L N
Sbjct: 277 LQNLEILVLRENRITA--LPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + + L NL +LDL +N+LT +P E+ L
Sbjct: 335 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 393
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQ 414
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT LP ++L L LG N
Sbjct: 346 LQNLQELCLDENQLTT--LPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN 403
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L +L L +N+++ + +G L NL L L +N+LT P E+ L
Sbjct: 404 RLSTLPKEIG-QLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK 462
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRI 145
+L+ L L NP+ + ++ KRI
Sbjct: 463 NLQELHLYLNPLSS------KEKKRI 482
>gi|78100687|gb|ABB21164.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 347
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L NKL + +F ++++L L + NQL LP + LT L L N
Sbjct: 82 LNKLTYLNLQWNKLQTLPAGVFDELKNLETLRIQQNQLKSLPSGIFDKLTKLTDLRLSSN 141
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
K+ ++ F LTKL+ L+L N++ + S V D L L L L +N+L VP
Sbjct: 142 KLQSLPEGVFDKLTKLTRLDLDYNQLKSLPSGVFDKLTELKDLSLQNNQLQRVPDGAFDY 201
Query: 118 LFHLKSLFLGGNPIKTVRNDIL------QDSKRIISHIKTSRLDYHCQNVDGGGMSSQES 171
L ++K+L+L NP DIL ++ K +S+I+ + DGG + E
Sbjct: 202 LSNIKTLWLDPNPWDCSCRDILYLSNWIREKKGTVSNIEAAE-------CDGGTKAVLEI 254
Query: 172 TSE 174
T E
Sbjct: 255 TEE 257
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDL NKL S F + LT LNL +N+L LP V + KNL L + N++ ++
Sbjct: 64 LDLQSNKLSSLPRTAFHGLNKLTYLNLQWNKLQTLPAGVFDELKNLETLRIQQNQLKSLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHLKS 123
+ F LTKL+ L L +NK+ + V D L L LDL N+L +P + L LK
Sbjct: 124 SGIFDKLTKLTDLRLSSNKLQSLPEGVFDKLTKLTRLDLDYNQLKSLPSGVFDKLTELKD 183
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L L N ++ V + +S+IKT LD
Sbjct: 184 LSLQNNQLQRVPDGAFD----YLSNIKTLWLD 211
>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 389
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV------------------ 44
++ LDLS +L +LP+ I +++L L L YNQLT+LP
Sbjct: 47 EVRVLDLSRQEL--KTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 45 ------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
KNL L LG N++ + + L L LL L +N+++ +S ++ L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQE-IEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 163
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
LDLS+N+LT +P E+ L +LKSL+L N T +I Q
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQ 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+LDLS+N+L + LP I+ +++L L LS NQ P +NL L L N
Sbjct: 160 LQNLKSLDLSNNQLTT--LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNN 217
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + N+ L KL L L +N++ + + L NL LDLS N+LT +P E+ L
Sbjct: 218 QITILPNE-IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLE 276
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N +KT+ +I Q
Sbjct: 277 NLQTLDLRNNQLKTLPKEIEQ 297
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L + LP I+ +++L L+L NQLT+LP KNL L L N
Sbjct: 91 LKNLQLLYLRSNRLTT--LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D L L L+L NN+++ + + + L NL L LS+N+ P E+ L
Sbjct: 149 RLTTLSKD-IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ 207
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK LFL N I + N+I
Sbjct: 208 NLKVLFLNNNQITILPNEI 226
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L LS N+L++ LP I+ +++L L+LSYNQLT+LP +NL L L N
Sbjct: 229 LKKLQYLYLSDNQLIT--LPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L NN++ + +G L NL L L N+LT +P E+ L
Sbjct: 287 QLKTLPKE-IEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 345
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 346 NLQTLYLNNN 355
>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 623
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L+ L L N L +F ++ LTEL++S+N++T+LP +LT L N I
Sbjct: 469 LEELILQKNSLTEIPAVVF-ELTRLTELDISFNRITVLPPGIAQLVSLTILRARQNSIRA 527
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ ++ ++ L KL +L++ NKI + + L +L LDL N++ VP +L + L+S
Sbjct: 528 LPSELYM-LPKLDVLDVFFNKIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRS 586
Query: 124 LFLGGNPIKTVRNDILQDS 142
L L GN I+ +R ILQ
Sbjct: 587 LNLEGNRIRAIRPAILQQG 605
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
+ + + T + NK+VS S P + +LT L+LS+N+L LP + + L HLLL N
Sbjct: 113 LWTEVNTFCAAQNKIVSIS-PQLFQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNN 171
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L+ LS LNL +N++ E+ + + L + +LDLS N+LT +P E + +
Sbjct: 172 ELCCLP-EALGCLSALSNLNLAHNRLVELPATMALLPRIEVLDLSANKLTSLPAEARNGW 230
Query: 120 H-LKSLFLGGN 129
L+ L L GN
Sbjct: 231 GTLRELELRGN 241
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD------CKNLTHL 54
+L ++ LDLS NKL S +L EL L NQL LP T L L
Sbjct: 205 LLPRIEVLDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPLLARL 264
Query: 55 LLGFNKINNMENDYFL----------------------TLTKLSLLNLKNNKISEVSSNV 92
L N++ + +D L TLT L++L+LK N ++
Sbjct: 265 DLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEH 324
Query: 93 GDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+ L ILDLS N L +P L + LK+L + GNP+ + ++ Q + I+ +++
Sbjct: 325 FSNLALQILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLR 383
>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
Length = 400
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGF 58
+L++L++L+L +N+L++ LP I + +LT L+L NQLT LP +L ++ LG
Sbjct: 83 LLTNLESLELWNNRLIN--LPESIGRLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGN 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ ++ D F L L L L +N+ + V ++G+L NL LDL N+LT++P +
Sbjct: 141 NQLTSLP-DSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLTNLPEFIGEF 199
Query: 119 FHLKSLFLGGN 129
+LK L + N
Sbjct: 200 SNLKRLKIQDN 210
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L++LK+L++ N+L + LP I++ +L L L N+L LP NLT L L N
Sbjct: 61 LTNLKSLEIRDNRLTT--LPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQN 118
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT L+ + L NN+++ + + +LI+L L LSDN+ T VP + L
Sbjct: 119 QLTTLP-ESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELT 177
Query: 120 HLKSLFLGGN 129
+LK L L GN
Sbjct: 178 NLKWLDLDGN 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L L + N+LT LP + NL L L N++ N+ + LT L+LL+L+ N+
Sbjct: 61 LTNLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLINLP-ESIGRLTNLTLLDLQQNQ 119
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ + +VG L +L ++L +N+LT +P +L L+SL L N +V I
Sbjct: 120 LTTLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESI 173
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGF 58
L+ L ++L +N+L S DS ID++SL LS NQ T +P + NL L L
Sbjct: 130 LTSLNYIELGNNQLTSLPDSFKNLIDLQSL---QLSDNQFTSVPESIGELTNLKWLDLDG 186
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ N+ ++ + L L +++N ++ + L L L+LS+N LTD+ L SL
Sbjct: 187 NQLTNLP-EFIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLTDLSI-LQSL 244
Query: 119 FHLKSL 124
LK +
Sbjct: 245 PKLKEV 250
>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 511
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 13/160 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L LK L L HN+L++ LP I ++ L ELNL+ NQL +LP + L HL N
Sbjct: 129 LRSLKRLHLEHNQLIT--LPQEIGTLQDLEELNLANNQLRILP--KEIGTLQHLQ-DLNV 183
Query: 61 INNME---NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
NN TL L LNL+NN++ + +G L L L L++N+L +P E+
Sbjct: 184 FNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGK 243
Query: 118 LFHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLD 155
L L+ L L N +K++ +I LQ+ K +I ++ +RL+
Sbjct: 244 LQKLEWLGLTNNQLKSLPQEIGKLQNLKELI--LENNRLE 281
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L +N+L + LP I ++ L L L+ NQL LP +NL L L +N
Sbjct: 336 LERLEWLNLYNNRLAT--LPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYN 393
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL +L L+LKNN+++ + +G L + L+L++N+L +P + L
Sbjct: 394 QLATLP-EAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQ 452
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LK L L GNP T +I+
Sbjct: 453 SLKDLDLSGNPFTTFPKEIV 472
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L L+ L L++N+L + LP I +++L +L+L YNQL LP + L L L N
Sbjct: 359 LQKLQHLYLANNQLAT--LPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN 416
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL K+ LNL NN++ + +G L +L LDLS N T P E+ L
Sbjct: 417 QLTTLPEEIG-TLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLK 475
Query: 120 HLKSLFLGGNP 130
HL+ L L P
Sbjct: 476 HLQMLKLKNIP 486
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL N+L +LP I +RSL L+L +NQL LP ++L L L N
Sbjct: 106 LQNLEVLDLYKNQL--RTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANN 163
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LN+ NN++ + +G L NL L+L +N L +P E+ +L
Sbjct: 164 QLRILPKEIG-TLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQ 222
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L+L N + T+ +I
Sbjct: 223 KLEWLYLTNNQLATLPKEI 241
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 24 IDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN 82
+D+R+L +L NQLT+ P +NL +L L N++ + + TL KL L L
Sbjct: 38 MDVRNL---DLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE-IETLQKLKWLYLSE 93
Query: 83 NKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQ 140
N++ + +G L NL +LDL N+L +P E+ L LK L L N + T+ +I LQ
Sbjct: 94 NQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQ 153
Query: 141 D 141
D
Sbjct: 154 D 154
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+ + LP I + L LNL +NQLT LP + L L L N
Sbjct: 290 LPNLQRLHLEYNRFTT--LPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 347
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDL N+L +P + +L
Sbjct: 348 RLATLPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQ 406
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 407 RLEWLSLKNNQLTTLPEEI 425
>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 498
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++TLDL + KL LP I +++L L+LS+N LT+LP +NL L L FN +
Sbjct: 50 VRTLDLRYQKLTI--LPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L LNL + K++ + +G L NL LDLS N LT +P E+ L +L+
Sbjct: 108 TLPKEVG-QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N + T+ +I Q
Sbjct: 167 RLDLHQNRLATLPMEIGQ 184
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +LKTL+L +L + LP I ++++L LNL NQLT LP + +NL L+L N
Sbjct: 231 LQNLKTLNLIVTQLTT--LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + + L L L+L N+++ + +G L NL LDL N+LT +P E+ L
Sbjct: 289 RITALPKEIG-QLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 347
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 348 NLQELCLDENQLTTLPKEIEQ 368
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDLS N L + LP + + +L LNL+ +LT LP +NL L L FN
Sbjct: 93 LRNLQELDLSFNSLTT--LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L+L N+++ + +G L NL LDL+ N+LT +P E+ L
Sbjct: 151 SLTTLPKEVG-QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 210 NLQELDLHRNQLTTLPKEIGQ 230
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ LDL N+L + LP I +++L LNL QLT LP + +NL L L N
Sbjct: 208 LRNLQELDLHRNQLTT--LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +L L+ N+I+ + +G L NL LDL N+LT +P E+ L
Sbjct: 266 QLTTLPKEIG-ELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQ 324
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + T+ +I Q
Sbjct: 325 NLQRLDLHQNQLTTLPKEIGQ 345
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L+L+ KL + LP I +R+L EL+LS+N LT LP +NL L L N
Sbjct: 116 LENLQRLNLNSQKLTT--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L +NK++ + + L NL LDL N+LT +P E+ L
Sbjct: 174 RLATLPMEIG-QLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK+L L + T+ +I
Sbjct: 233 NLKTLNLIVTQLTTLPKEI 251
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + LP I +++L L+L NQLT LP +NL L L N
Sbjct: 277 LQNLEILVLRENRITA--LPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L N+++ + + L NL +LDL +N+LT +P E+ L
Sbjct: 335 QLTTLPKEIG-QLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQ 393
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L LG N + T+ +I Q
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQ 414
>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 447
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L NKL++ P I +R+L LNL NQL LPV +NL L L N
Sbjct: 116 LQNLQELGLYKNKLIT--FPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL++N+++ + +G L NL L LS+N+LT P E+ L
Sbjct: 174 RLTVLPKEIG-QLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L N + + +I Q
Sbjct: 233 NLQELDLWNNRLTALPKEIGQ 253
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L++LDLS N+LV LP I +++L EL L N+L P +NL L L N
Sbjct: 93 LQKLESLDLSENRLVM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL+ N+++ + +G L NL L+L DN+L +P E+ L
Sbjct: 151 QLATLPVEIG-QLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T +I Q
Sbjct: 210 NLQTLGLSENQLTTFPKEIGQ 230
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L LP I +++L LNL NQL LPV +NL L L N
Sbjct: 162 LQNLEKLNLRKNRLTV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L+L NN+++ + +G L NL L+LS+N+LT P E+ L
Sbjct: 220 QLTTFPKEIG-QLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 278
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L+ L L N + + +I Q K
Sbjct: 279 KLQDLGLSYNRLVILPKEIGQLEK 302
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L LS+N+LV LP I + L +L LSYN+L +LP KNL L L +N
Sbjct: 277 LKKLQDLGLSYNRLVI--LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 334
Query: 60 KINNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP 112
+ F T++K L LNL N+++ + + +G L NL LDL N+LT +P
Sbjct: 335 Q--------FKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLP 386
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDI 138
E+ L +L +L LG N + T+ +I
Sbjct: 387 KEIGQLKNLYNLGLGTNQLTTLPKEI 412
>gi|357626475|gb|EHJ76551.1| putative leucine-rich repeat-containing protein 4B [Danaus
plexippus]
Length = 573
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNK 60
+ L+ LDLS N LVS + F R L EL+L++N+++ + T +LT L L N
Sbjct: 5 TELQHLDLSQNHLVSIPMKNFAYQRKLQELHLNHNKISSVTNTTFQGLNSLTVLNLKRNF 64
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSSL 118
+ + N F TL +L LNL N+IS++ L L IL L DNEL+ VP S L
Sbjct: 65 LEELTNGVFSTLPRLEELNLGQNRISKIEPRAFAGLSALRILYLDDNELSSVPTTSFSLL 124
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRI 145
L L +G N + +D R+
Sbjct: 125 GSLAELHVGLNAFSFLPDDAFAGLNRL 151
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
LS L+ L L N+L S F + SL EL++ N + LP
Sbjct: 100 LSALRILYLDDNELSSVPTTSFSLLGSLAELHVGLNAFSFLP------------------ 141
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDVPC-ELSSLF 119
+D F L +L++L+L + +S L L L+L N L+ VP +LSSL
Sbjct: 142 ----DDAFAGLNRLAVLDLNGAGLFNISDFAFRGLPGLRSLNLFGNRLSVVPTQQLSSLT 197
Query: 120 HLKSLFLGGN 129
L+ L++G N
Sbjct: 198 RLEELYIGQN 207
>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
[Organic Lake phycodnavirus 1]
Length = 598
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 28/154 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP----------------- 43
L+HL+ LD+ +N+L LP I ++ +L EL + NQLT LP
Sbjct: 228 LTHLQMLDIGYNEL--SELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNN 285
Query: 44 ----VCTDCKNLTHL---LLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+ NLTHL + NK++ + + LT L L ++NN+++ + +G+L
Sbjct: 286 QLSQLPLRIGNLTHLQILAIANNKLSELP-ERISNLTNLQKLYIQNNQLTRLPLRIGNLT 344
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
NL +LD+ +N+LT +P +S+L +L++L L NP
Sbjct: 345 NLKVLDIKNNQLTQIPESISNLTNLETLVLTNNP 378
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 26 MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
MRSL + N+LT+LPV +NL L N+++ + + LT L +L++K+N+
Sbjct: 139 MRSLY---IESNELTLLPVSIGGLQNLEQLFTSSNRLSQIP-ESICNLTNLQMLDIKDNE 194
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++++ ++G L L LD+ +NEL+++P +++L HL+ L +G N + + I
Sbjct: 195 LTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESI 248
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 20 LPLFID-MRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLS 76
LP+ I +++L +L S N+L+ +P +C + NL L + N++ + + L KL
Sbjct: 152 LPVSIGGLQNLEQLFTSSNRLSQIPESIC-NLTNLQMLDIKDNELTQLP-KHIGKLRKLK 209
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L++ NN++SE+ ++ +L +L +LD+ NEL+++P +S+L +L+ L++ N
Sbjct: 210 KLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENN 262
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 23/112 (20%)
Query: 18 DSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSL 77
D L +++++ NL+ N+L+ +P D L L
Sbjct: 13 DDLEFNKELQNVISFNLANNELSTIP-----------------------DSIGNLIHLQQ 49
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L+++NN++ ++ ++G+LI+L LD+ +NEL +P + +L HL+ L + N
Sbjct: 50 LDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDN 101
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 2 LSHLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---L 56
L HL+ LD+ +N+L + DS+ I L +L++ N+L LP NL HL +
Sbjct: 44 LIHLQQLDIRNNELGQLPDSIGNLI---HLQQLDIRNNELGQLP--DSIGNLIHLQQLDI 98
Query: 57 GFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
N +N + + L +L +LN+ N+++ + N+G++ + L + NELT +P +
Sbjct: 99 EDNWLNQLP-ESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIG 157
Query: 117 SLFHLKSLFLGGNPIKTVRNDI 138
L +L+ LF N + + I
Sbjct: 158 GLQNLEQLFTSSNRLSQIPESI 179
>gi|429962987|gb|ELA42531.1| hypothetical protein VICG_00283, partial [Vittaforma corneae ATCC
50505]
Length = 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ LDLSHNKL +SLP I ++++L L+L YNQ P V +NL L L N
Sbjct: 66 LVRLERLDLSHNKL--ESLPSEIGELKNLRCLDLGYNQFESFPTVIGKLENLYVLELYKN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++ D L L +LNL NNK+ + +G+L +L IL L +N L +P + L
Sbjct: 124 NLESLP-DVIGKLKNLGMLNLGNNKLETLPPVIGELEDLGILYLHENNLKTLPDVIVKLR 182
Query: 120 HLKSLFLGGNPIKTV 134
L L+L N ++T+
Sbjct: 183 KLHDLYLSNNKLETL 197
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L+L +NKL ++LP I ++ L L L N L LP V + L L L N
Sbjct: 135 LKNLGMLNLGNNKL--ETLPPVIGELEDLGILYLHENNLKTLPDVIVKLRKLHDLYLSNN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + L LS L+L N I + + L NL L L+DN+L +P + L
Sbjct: 193 KLETLPAK-LEELENLSTLSLDENNIKTLPDVIVKLRNLRGLYLNDNKLETLPAAIGELE 251
Query: 120 HLKSLFL 126
HL+ L L
Sbjct: 252 HLRELNL 258
>gi|304269008|dbj|BAJ14956.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
LDL+ N L + S F + LT LNL YNQL LP V NL L L N++ ++
Sbjct: 45 LDLNSNSLATLSDTAFRGLTKLTWLNLDYNQLQTLPAGVFDQLVNLKELYLSRNQLKSLP 104
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F +LT+L+LLNL N++ + V D L L L L +N+L VP SL L
Sbjct: 105 PRVFDSLTQLTLLNLDRNQLQSIPEKVFDKLTQLQQLYLYNNQLQSVPDGAFDSLGKLDY 164
Query: 124 LFLGGNPIKTVRNDIL 139
+ L NP +DI+
Sbjct: 165 MTLNNNPWDCACSDII 180
>gi|126570600|gb|ABO21238.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINN 63
K+LDL +N S F + LT LNL YN L LPV L L+L N++ +
Sbjct: 36 KSLDLKYNAFTQLSSNAFRGLTKLTWLNLQYNALQTLPVGVFDQLTELGTLVLQSNQLKS 95
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP 112
++ F +LTKL+ LNL+ N++ + + V D L NL L L+ N+L VP
Sbjct: 96 LQTGVFDSLTKLTWLNLQQNQLQSIPAGVFDKLTNLNRLHLNSNQLQSVP 145
>gi|428182138|gb|EKX51000.1| hypothetical protein GUITHDRAFT_66517, partial [Guillardia theta
CCMP2712]
Length = 344
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L LDLS NKL S +F + SL L+++ NQLT LP + +L L + N
Sbjct: 18 LTSLSFLDLSSNKLTSLPAGIFAGLTSLGSLSINSNQLTSLPAGIFAGLTSLWSLSINSN 77
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL 115
++ ++ F LT L L++ +N+++ + + + L +L+ LDLS N+LT +P +
Sbjct: 78 QLTSLPAGIFAGLTSLGSLSINSNQLTSLPAGIFAGLTSLSTLDLSSNKLTSLPAGI 134
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMEND 67
L N+LVS SL +F ++ SL+ L+LS N+LT LP + +L L + N++ ++
Sbjct: 2 LQQNQLVSLSLGVFANLTSLSFLDLSSNKLTSLPAGIFAGLTSLGSLSINSNQLTSLPAG 61
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCEL-SSLFHLKSLF 125
F LT L L++ +N+++ + + + L +L L ++ N+LT +P + + L L +L
Sbjct: 62 IFAGLTSLWSLSINSNQLTSLPAGIFAGLTSLGSLSINSNQLTSLPAGIFAGLTSLSTLD 121
Query: 126 LGGNPIKTVRNDILQD 141
L N + ++ IL
Sbjct: 122 LSSNKLTSLPAGILAS 137
>gi|418688126|ref|ZP_13249283.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410737550|gb|EKQ82291.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 266
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+LV LP I +++L L+L N+LT LP +NL L N
Sbjct: 93 LQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ V +G L NL LDL N LT VP E+ L
Sbjct: 151 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEIGQLQ 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L GN + T+ ++I Q
Sbjct: 210 NLQKLDLKGNRLTTLSDEIGQ 230
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L++L LS N+L LP +++++L L+LS NQL +LP KNL L L N
Sbjct: 70 LKNLQSLYLSDNQLTI--LPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +L N+++ + +G L NL L+LS+N LT VP E+ L
Sbjct: 128 KLTTLPKEIG-QLENLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L L GN + TV +I Q
Sbjct: 187 NLQKLDLKGNRLTTVPKEIGQ 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L++LDL NKL + LP I + +L L N+L +LP +NL +L L N
Sbjct: 116 LKNLQSLDLYKNKLTT--LPKEIGQLENLQMLWSPENRLAILPKEIGQLENLENLNLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+LK N+++ V +G L NL LDL N LT + E+ L
Sbjct: 174 RLTTVPKEIG-QLQNLQKLDLKGNRLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLK 232
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 233 NLQKLYLIDN 242
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL K++ + +G L NL L LSDN+LT +P E+ L +L+ L L N + + N
Sbjct: 52 VLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPN 111
Query: 137 DI 138
+I
Sbjct: 112 EI 113
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 25 DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+ +L LNLS N+LT +P +NL L L N++ + + L L L+LK N
Sbjct: 161 QLENLENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEIG-QLQNLQKLDLKGN 219
Query: 84 KISEVSSNVGDLINLAILDLSDNELT 109
+++ +S +G L NL L L DN+L+
Sbjct: 220 RLTTLSDEIGQLKNLQKLYLIDNQLS 245
>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 378
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +LK+L LS+N+L + P I +++L EL LS NQLT P + L L LG N
Sbjct: 184 LQNLKSLFLSNNQLTT--FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L KL LNL N+++ + +G L NL +L LS N+ +P E L
Sbjct: 242 QLTTIPNEIG-KLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + + +I
Sbjct: 301 NLKMLSLDANQLTALPKEI 319
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+LS N+L+ LP I +++L EL L+YNQ P K+L L L N
Sbjct: 69 LKNLQMLNLSDNQLII--LPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNN 126
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN++ +S + L NL L L +N+LT P E+ L
Sbjct: 127 QLTILPVEIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQ 185
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LKSLFL N + T +I
Sbjct: 186 NLKSLFLSNNQLTTFPKEI 204
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L L N+L + +P I ++ L ELNL NQLT +P +NL L L +N
Sbjct: 230 LQKLQWLGLGDNQLTT--IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + F L L +L+L N+++ + +G L NL +L+L N+L +P E+ L
Sbjct: 288 QFKTIPVE-FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQ 346
Query: 120 HLKSLFLGGN 129
+L++L+L N
Sbjct: 347 NLQTLYLRNN 356
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L L LS+N+L LP+ I +++L ELNL NQL T+ KNL L L N
Sbjct: 115 LKSLHKLYLSNNQLTI--LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNN 172
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L L L L NN+++ +G L NL L LS+N+LT P E+ L
Sbjct: 173 QLTAFPKEIG-KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L LG N + T+ N+I
Sbjct: 232 KLQWLGLGDNQLTTIPNEI 250
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+L + P I +++L L LS NQLT P +NL L L N
Sbjct: 161 LKNLQKLYLDNNQLTA--FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL L L +N+++ + + +G L L L+L N+LT +P E+ L
Sbjct: 219 QLTTFPKEIG-KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQ 277
Query: 120 HLKSLFLGGNPIKTV 134
+L+ LFL N KT+
Sbjct: 278 NLQVLFLSYNQFKTI 292
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +L+ L+L +N+L + S + +++L +L L NQLT P +NL L L N+
Sbjct: 138 LQNLQELNLWNNQLKTISKEIE-QLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQ 196
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L NN+++ +G L L L L DN+LT +P E+ L
Sbjct: 197 LTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQK 255
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L+ L L N + T+ +I Q
Sbjct: 256 LQELNLDVNQLTTIPKEIGQ 275
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L K+ + +G L NL +L+LSDN+L +P E+ L +L+ LFL N KT +I
Sbjct: 54 LSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIE 113
Query: 140 Q 140
Q
Sbjct: 114 Q 114
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 28/138 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL +LP I +++L LNLS NQL +LP KNL L L +N+
Sbjct: 49 VRVLILSEQKL--KALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQ-- 104
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
F T K +I ++ S L L LS+N+LT +P E+ L +L+
Sbjct: 105 ------FKTFPK---------EIEQLKS-------LHKLYLSNNQLTILPVEIGQLQNLQ 142
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L N +KT+ +I Q
Sbjct: 143 ELNLWNNQLKTISKEIEQ 160
>gi|126570522|gb|ABO21212.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K+LDL +N S F + LT LNL YNQL LP V L +L L N++ +
Sbjct: 36 KSLDLKYNAFTQLSSNAFQGLTKLTWLNLQYNQLQTLPEGVFAHLTELGNLGLSGNQLKS 95
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHL 121
+ F LTKL+ L+L N++ + D L NL LDL +N+L VP L L
Sbjct: 96 LPPRVFDRLTKLTYLSLSENQLQSIPEGAFDTLTNLQTLDLRNNQLQSVPHGAFDPLKKL 155
Query: 122 KSLFLGGNP 130
++ L NP
Sbjct: 156 ATIVLYNNP 164
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L+L +N+L + +F + L L LS NQL LP V LT+L L N
Sbjct: 56 LTKLTWLNLQYNQLQTLPEGVFAHLTELGNLGLSGNQLKSLPPRVFDRLTKLTYLSLSEN 115
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDN 106
++ ++ F TLT L L+L+NN++ V D L LA + L +N
Sbjct: 116 QLQSIPEGAFDTLTNLQTLDLRNNQLQSVPHGAFDPLKKLATIVLYNN 163
>gi|284010757|dbj|BAI66858.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 238
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINN 63
K L+L NKL S S F + LT L+L NQL LP+ L L L +N + +
Sbjct: 43 KKLELGRNKLSSLSAKAFHHLSKLTYLSLDNNQLQALPIGVFDQLVELDELYLQYNDLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHL 121
+ F LTK++ L+L +NK+ + V D L L L ++ N+L +VP SL +
Sbjct: 103 LPQGIFDKLTKITNLDLTDNKLQSLPHGVFDKLTELKTLQMTSNQLRNVPHGAFDSLSSI 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
++ L GNP NDIL SK I K L+ H G Q S + + I
Sbjct: 163 SNVQLFGNPWDCSCNDILYLSKWI--REKQGNLERH-----AGANCDQSSKAVLEI 211
>gi|126325849|ref|XP_001370709.1| PREDICTED: leucine-rich repeat-containing protein 58 [Monodelphis
domestica]
Length = 468
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNKINN 63
L+ L+LS N + P ++MR+L L+L NQL T+ P + ++L L LG N I
Sbjct: 219 LQVLNLSGN-CFQELPPALLEMRALQTLSLGGNQLHTIPPEIENLRSLEFLYLGGNFIRE 277
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + L L+ L L +NKI V + L +L L L +N LT +P E+ SL HL+
Sbjct: 278 IPPE-LANLPSLNHLVLCDNKIQSVPPQLAQLNSLRSLSLHNNLLTYLPREILSLVHLQE 336
Query: 124 LFLGGNP--IKTVRNDILQDSKRIIS----HIKTSRLDYHCQNVDG 163
L L GNP ++ VR D+ D ++ IKT + Y ++ G
Sbjct: 337 LSLRGNPLVVRFVR-DLTYDPPTLLELAGRTIKTRNIAYTPCDLPG 381
>gi|418706465|ref|ZP_13267313.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410764090|gb|EKR34809.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++ LDLS + +LP I + +L LNL N+LT LP + +NL L + NK
Sbjct: 48 NEVRILDLSRKQ--RTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNK 105
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I+ +++ L L +L L N +S + +G+L NL ILD++ N+++ P E L +
Sbjct: 106 ISTFPKEFW-KLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKN 164
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY------HCQNVDGGGMSSQESTSE 174
L+ L L GN + + +I + K I ++ ++L +N+ +SS + TS
Sbjct: 165 LEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTS- 223
Query: 175 INIDKYKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEI 214
I + +L + + L L + PE + +QE TIEI
Sbjct: 224 IPDELGQLKKLRILNLWDNPTLTTPERNIRKLFRNQEITIEI 265
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L+ N L +LP I ++ +L L+++ N+++ P KNL LLL N
Sbjct: 116 LKNLEVLLLNGNSL--SNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++N+ + L KL +L L NN+++ + +G L NL L LS N+LT +P EL L
Sbjct: 174 SLSNLPEEIG-ELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLK 232
Query: 120 HLKSLFLGGNPIKT 133
L+ L L NP T
Sbjct: 233 KLRILNLWDNPTLT 246
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
T ++ +L+L + + + +G L+NL L+L DN+LT++P E+ L +LK L + N
Sbjct: 46 TPNEVRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNK 105
Query: 131 IKT 133
I T
Sbjct: 106 IST 108
>gi|365960697|ref|YP_004942264.1| hypothetical protein FCOL_08280 [Flavobacterium columnare ATCC
49512]
gi|365737378|gb|AEW86471.1| hypothetical protein FCOL_08280 [Flavobacterium columnare ATCC
49512]
gi|381342844|gb|AFG23461.1| hypothetical protein [Flavobacterium columnare]
Length = 313
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNK 60
LS LK LD+S NK +SD M +LTELN S N + T P + +NL L NK
Sbjct: 128 LSKLKKLDISCNK-ISDLPAEMAGMINLTELNFSNNTVKTFFPGIENLRNLKILNAEKNK 186
Query: 61 IN----------------------NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
I + + L+KLS LNL+ N I ++ +++G + +
Sbjct: 187 IEVCPVEIGLLMNLTTLNLNQNKITVLPEEIGNLSKLSYLNLEKNMIKKIPTSMGKCLMI 246
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+ LDL +N+L +P EL+ L LK L+LG NP
Sbjct: 247 SYLDLDENQLRTLPEELNQLSLLKELYLGTNP 278
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+ +K LDLS NK ++ P + ++ +L L N + LP+ + NLT L + N
Sbjct: 37 ATVKILDLS-NKQMTKIPPEIGNFVNVEKLYLKNNTIVSLPI--EIANLTKLKELY-LTN 92
Query: 63 NMENDYFLTLTKLSLLN---LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
N+ + + + KL+ L L NK+ +S +V L L LD+S N+++D+P E++ +
Sbjct: 93 NLIQRFPIEICKLTCLEKLELNKNKMEYISPSVAKLSKLKKLDISCNKISDLPAEMAGMI 152
Query: 120 HLKSLFLGGNPIKT 133
+L L N +KT
Sbjct: 153 NLTELNFSNNTVKT 166
>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 557
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ L+L +N+L + LP I ++ L L L+ NQL LP +NL L L +N
Sbjct: 382 LERLEWLNLYNNRLAT--LPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYN 439
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL +L L+LKNN+++ + +G L + L+L++N+L +P + L
Sbjct: 440 QLATLP-EAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQ 498
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
LK L L GNP T +I+
Sbjct: 499 SLKDLDLSGNPFTTFPKEIV 518
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 9/158 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HL+ L++ +N+L++ LP I +++L L L+YNQLT LP +NL L + N
Sbjct: 175 LQHLQDLNVFNNQLIT--LPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNN 232
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LNL+NN++ + +G L L L L++N+L +P E+ L
Sbjct: 233 QLVTLPQEIG-TLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQ 291
Query: 120 HLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRLD 155
L+ L L N +K++ +I LQ+ K +I ++ +RL+
Sbjct: 292 RLEWLGLTNNQLKSLPQEIGKLQNLKELI--LENNRLE 327
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L L+ L L++N+L + LP I +++L +L+L YNQL LP + L L L N
Sbjct: 405 LQKLQHLYLANNQLAT--LPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN 462
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL K+ LNL NN++ + +G L +L LDLS N T P E+ L
Sbjct: 463 QLTTLPEEIG-TLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLK 521
Query: 120 HLKSLFLGGNP 130
HL+ L L P
Sbjct: 522 HLQILKLKNIP 532
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L +N+ + LP I + L LNL +NQLT LP + L L L N
Sbjct: 336 LPNLQRLHLEYNRFTT--LPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 393
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL KL L L NN+++ + +G L NL LDL N+L +P + +L
Sbjct: 394 RLATLPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQ 452
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+ L L N + T+ +I
Sbjct: 453 RLEWLSLKNNQLTTLPEEI 471
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFN 59
L LK L LS N+L + LP I ++ L L L NQLT +P ++L L L N
Sbjct: 83 LQKLKWLYLSENQLAT--LPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNN 140
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + TL L LNL NN++ + +G L +L L++ +N+L +P E+ +L
Sbjct: 141 QLITLPQEIG-TLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQ 199
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+LK L L N + T+ +I
Sbjct: 200 NLKYLRLAYNQLTTLPEEI 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 71 TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
TL L L+L NN++ + + L L L LS+N+L +P E+ L L+ L+LGGN
Sbjct: 59 TLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQ 118
Query: 131 IKTVRNDI--LQD 141
+ T+ +I LQD
Sbjct: 119 LTTIPQEIGALQD 131
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 78 LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRND 137
L+L NN+++ +G L NL L L++N+L +P E+ +L LK L+L N + T+ +
Sbjct: 43 LDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKE 102
Query: 138 I--LQDSKRI 145
I LQ +R+
Sbjct: 103 IGKLQRLERL 112
>gi|432943211|ref|XP_004083109.1| PREDICTED: keratocan-like [Oryzias latipes]
Length = 342
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L LDL NKL+ D++ + SL ++NL+ NQL+ +P+ + T L L N
Sbjct: 156 LEKLSLLDLQGNKLMDDAVTEVSLKGLNSLVQINLAKNQLSKMPLGLP-PSTTQLYLDGN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKI--SEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
I+ + YF L K++ L L NNK+ S +V + ++ L LS N+LT+VP S
Sbjct: 215 NIDKIPAGYFKGLPKMAFLRLNNNKLGSSGFPKDVFNRSSILDLQLSYNQLTEVPLISSG 274
Query: 118 LFHL-----KSLFLGGNPIKTVRNDILQDS-KRIISHIKTSRLD 155
L HL K ++ G+ I V D + DS + ++ RLD
Sbjct: 275 LEHLHLDHNKITYVNGSKICPVSVDAVDDSLNESVPQLRYLRLD 318
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 3 SHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ L+ ++L+ NK+ S+ + + M +L L + N L+ +P +L HL L N+I
Sbjct: 87 TQLRWINLNRNKITSEGVGDVLSSMTNLAHLYMDDNLLSSVPSPLPA-SLEHLRLSRNRI 145
Query: 62 NNMENDYFLTLTKLSLLNLKNNK-----ISEVSSNVGDLINLAILDLSDNELTDVPCELS 116
+ + F+ L KLSLL+L+ NK ++EVS + L +L ++L+ N+L+ +P L
Sbjct: 146 SKIPAGVFVGLEKLSLLDLQGNKLMDDAVTEVS--LKGLNSLVQINLAKNQLSKMPLGLP 203
Query: 117 SLFHLKSLFLGGNPIKTV 134
L+L GN I +
Sbjct: 204 P--STTQLYLDGNNIDKI 219
>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
Length = 471
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 24/136 (17%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+ LK LDL HNKL ++ P+ +RSLT L L +N++T +
Sbjct: 202 TQLKVLDLRHNKL-AEIPPVIYQLRSLTTLYLRFNRITAVA------------------- 241
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ + +L
Sbjct: 242 ----DDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLN 297
Query: 123 SLFLGGNPIKTVRNDI 138
+L L N + + + I
Sbjct: 298 ALDLQHNELLDIPDSI 313
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 32 LNLSYNQLTMLPVCT-DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + +T+LP +C +LT L L NKI + + L L L L N ++ +
Sbjct: 138 LDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIG-CLVNLRNLALNENSLTSLPE 196
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++ + L +LDL N+L ++P + L L +L+L N I V +D+ Q
Sbjct: 197 SLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQ 246
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 4 HLKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
+L LDL HN+L + DS+ +L L LS N L +P + + L L L N+
Sbjct: 295 NLNALDLQHNELLDIPDSI-----GNNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 349
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + ++ L L +L L L+ N+I+ + ++G L NL L +S+N L +P E+ SL
Sbjct: 350 IEVLPHEVGL-LHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLES 408
Query: 121 LKSLFLGGNP 130
L++L++ NP
Sbjct: 409 LENLYINQNP 418
>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
str. 56601]
gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
str. IPAV]
Length = 498
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLSDNQLATLPVEIGQ 230
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++ L+LS KL + LP I +++L ELNL +N LT+LP +NL L L N++
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L+L N++ + + +G L NL L L N+LT P E+ L +L+
Sbjct: 108 TFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L+L N + + +I Q
Sbjct: 167 KLWLSENRLTALPKEIGQ 184
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 356
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ L+L N+L +LP I +++L EL LS NQLT+LP KNL L+LG N
Sbjct: 162 LQSLQKLNLDKNRL--KALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LL NN+++ + +G L L L LS N+LT +P E+ L
Sbjct: 220 QLTILPKEIG-QLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLE 278
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + T+ +I Q
Sbjct: 279 NLQELYLNDNQLTTLPKEIGQ 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L +N+L +LP I ++SL L LS N+LT P KNL L L +N
Sbjct: 93 LQNLQELNLWNNQL--KNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N++ + + +G L NL L LS+N+LT +P E+ L
Sbjct: 151 QLTTLLQEIG-QLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLK 209
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L LG N + + +I Q
Sbjct: 210 NLQALILGDNQLTILPKEIGQ 230
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L L+TL LS N+L + P I +++L +LNL YNQLT +L ++L L L N
Sbjct: 116 LQSLQTLILSVNRLTT--FPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + N+ L L L L NN+++ + +G L NL L L DN+LT +P E+ L
Sbjct: 174 RLKALPNEIG-QLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+LK L+ N + + +I Q K
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQK 256
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L+L NN+ + +G L NL L+L +N+L ++P E+ L L++L L N +
Sbjct: 70 LQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRL 129
Query: 132 KTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKL 182
T +I Q + +++ LDY+ + +S ++N+DK +L
Sbjct: 130 TTFPQEIGQ-----LKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRL 175
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL + K++ + + L NL LDL++N+ +P E+ L +L+ L L N +K +
Sbjct: 52 VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111
Query: 137 DILQ 140
+I Q
Sbjct: 112 EIGQ 115
>gi|270006010|gb|EFA02458.1| hypothetical protein TcasGA2_TC008146 [Tribolium castaneum]
Length = 885
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 75/157 (47%), Gaps = 28/157 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
LS L+TLDLSHN + S S LF +++L LNL+ N LT +P T NL L L N
Sbjct: 224 LSDLRTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNVPSGTFRGLTNLRELNLSGN 283
Query: 60 K------------------------INNMENDYFLTLTKLSLLNLKNNK-ISEVSSNV-G 93
K I + N L + KL L ++NNK + E+ + V
Sbjct: 284 KLMHFTFGLLHFSPELTSLTLDDTHIEELHNSELLGIAKLETLRIRNNKQLREIENYVFA 343
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
D L LD+S N LT +P L++L LK L + NP
Sbjct: 344 DTPRLKELDISGNALTFLPISLANLTTLKRLNISDNP 380
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--------------------- 43
L TLDL+ N + F +L E+NLSYN + LP
Sbjct: 108 LITLDLTSNNVTKLQDYYFQQYTNLKEMNLSYNAIDDLPRYVFVNQSLRILALAHNSLQA 167
Query: 44 ----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINL 98
V + L L + +N I + + +F + LL L NNKI++++SN DL +L
Sbjct: 168 IPFQVFAPMQRLQILDISYNHIVAILDHFFKFNKHIELLALNNNKIAKLTSNALADLSDL 227
Query: 99 AILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
LDLS N + + L SL +LK L L NP+ V
Sbjct: 228 RTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNV 264
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 27/131 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML---------------------- 42
L+ L L+HN L + +F M+ L L++SYN + +
Sbjct: 155 LRILALAHNSLQAIPFQVFAPMQRLQILDISYNHIVAILDHFFKFNKHIELLALNNNKIA 214
Query: 43 ----PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLIN 97
D +L L L N I ++ F +L L LNL NN ++ V S L N
Sbjct: 215 KLTSNALADLSDLRTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNVPSGTFRGLTN 274
Query: 98 LAILDLSDNEL 108
L L+LS N+L
Sbjct: 275 LRELNLSGNKL 285
>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 591
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDL N+L + LP I ++SL L L NQLT+LP +NL L L N
Sbjct: 231 LQKLQKLDLRENQLTT--LPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCEN 288
Query: 60 K----------INNMENDYFL------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ + N+++ Y L L +LNL N+++ + +G L N
Sbjct: 289 RFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQN 348
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L IL+LS N+LT +P EL L +LK+L L I T +ILQ + + SR
Sbjct: 349 LQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQN--LEKLNWSRTQLT 406
Query: 158 CQNVDGGGMSSQESTSEINIDKYKL 182
+ G M ++ E+N++K +L
Sbjct: 407 TLPGEIGQM---QNLKELNLEKNQL 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP + ++ L +L+L NQLT LP K+L L L N
Sbjct: 139 LQNLQTLNLDSNELTA--LPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRAN 196
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L LNL +N+++ + + L L LDL +N+LT +P E+ L
Sbjct: 197 QFATLPKE-ILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLK 255
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L++L+L N + + +I
Sbjct: 256 SLQTLYLLANQLTILPEEI 274
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+TLDL NKL LP + +++L L L NQLT+L + L L L N
Sbjct: 70 LQNLQTLDLFDNKLTV--LPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRAN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L LNL +N+++ + + L L LDL +N+LT +P E+ L
Sbjct: 128 QFATLPKE-ILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLK 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L+L N T+ +ILQ
Sbjct: 187 SLQTLYLRANQFATLPKEILQ 207
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+ S +L + LP I M++L ELNL NQLT LP +NL L L N
Sbjct: 392 LQNLEKLNWSRTQLTT--LPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSN 449
Query: 60 KINNMENDYFLTLTKL--SLLNLKN-----NKISEVSSNVGDLINLAILDLSDNELTDVP 112
++ F +L K L NLKN N ++ + +G L L L L N L +P
Sbjct: 450 ------SNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLP 503
Query: 113 CELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
E+ L++L+ L L NP+ ++ +I Q I H++ + L
Sbjct: 504 EEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPL 545
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 74 KLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKT 133
K+ +LNL K+S + +G+L NL LDL DN+LT +P E+ L +L+ L L N +
Sbjct: 49 KVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTI 108
Query: 134 VRNDILQDSK 143
+ +I Q K
Sbjct: 109 LSEEIGQLQK 118
>gi|301113684|ref|XP_002998612.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111913|gb|EEY69965.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 277
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+S L+TLDL+ NKL LP ++ +R+L L +S N L LP + + LT L+L N
Sbjct: 56 VSTLRTLDLTGNKL--SELPSQLNNLRALKTLKVSSNILETLPDLSKLEALTTLVLDGNL 113
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ ++ N LTKLSL K NK+ V +V +L L LD+S+N L +P L +
Sbjct: 114 LEDIPNALPPNLTKLSL---KGNKLRSVPRSVLELSQLQELDMSENSLETLPSNLGEMQE 170
Query: 121 LKSLFLGGN 129
L+ L + GN
Sbjct: 171 LQELNVDGN 179
>gi|196008521|ref|XP_002114126.1| hypothetical protein TRIADDRAFT_58269 [Trichoplax adhaerens]
gi|190583145|gb|EDV23216.1| hypothetical protein TRIADDRAFT_58269 [Trichoplax adhaerens]
Length = 1784
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 28 SLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMEN-------------------- 66
+LT +N S N+L LP+ C KN+ + +G+N+I N+
Sbjct: 926 TLTNINFSGNKLKELPLGMKCLKNIQQIFIGYNEITNIPEGLLSAFSDSLISLDLSSNFI 985
Query: 67 ----DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
D TLT L +LNL N I ++S+N+G L +L L+L+ + LT +P SSL +L
Sbjct: 986 RRLPDDIGTLTNLKMLNLAYNPIDQLSNNIGQLKSLEALNLTGHTLTYLPDTFSSLQNLS 1045
Query: 123 SLFLGGNP-IKTVRNDILQD 141
L L G P I+ D L +
Sbjct: 1046 KLSLNGVPWIQVTSQDYLHN 1065
>gi|302763465|ref|XP_002965154.1| hypothetical protein SELMODRAFT_83151 [Selaginella moellendorffii]
gi|300167387|gb|EFJ33992.1| hypothetical protein SELMODRAFT_83151 [Selaginella moellendorffii]
Length = 262
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKIN 62
++TLD S NK+ LPL ID + +L L L N LT LP +L L L N+++
Sbjct: 44 VRTLDASCNKI--GELPLSIDSLHNLQRLILVENSLTRLPSTFVKLTSLKTLALDSNQLS 101
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ ++ L L +L L++ +N +S + S++G L NL ILD+S N++ +P + S F L+
Sbjct: 102 ELPDEIGL-LVRLERLSIASNHLSSLPSSMGSLRNLVILDISQNQVKVLPESIGSCFSLE 160
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKT 151
+ GN I+ L S +SH+KT
Sbjct: 161 EIQASGNRIEQ-----LPQSLSNLSHLKT 184
>gi|284010761|dbj|BAI66860.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 238
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L+L +NKL S S F +++ LT LNL NQL LP V L L L +N + +
Sbjct: 43 KKLELDYNKLSSLSAKAFHNLKELTYLNLDTNQLQTLPPGVFDQLVELDELYLQYNDLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHL 121
+ F +LTKL+ L+L N++ + V D L L L++ +N+L VP E SL +
Sbjct: 103 LPPRVFDSLTKLTYLSLDRNQLQSLPKGVFDKLTELRTLEMRNNQLKRVPEEAFDSLVQI 162
Query: 122 KSLFLGGNPIKTVRNDIL 139
+ L NP DIL
Sbjct: 163 SEVQLYDNPWDCSCRDIL 180
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L L+L N+L + +F + L EL L YN L LP V LT+L L N
Sbjct: 63 LKELTYLNLDTNQLQTLPPGVFDQLVELDELYLQYNDLKSLPPRVFDSLTKLTYLSLDRN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVP--CELSS 117
++ ++ F LT+L L ++NN++ V D +++ +S+ +L D P C
Sbjct: 123 QLQSLPKGVFDKLTELRTLEMRNNQLKRVPEEAFD----SLVQISEVQLYDNPWDCSCRD 178
Query: 118 LFHLKSLF 125
+ +L++
Sbjct: 179 ILYLRNWI 186
>gi|410929027|ref|XP_003977901.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
4-like [Takifugu rubripes]
Length = 655
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL + F +R L L++ N L ++P+ DC+NL L LG+N
Sbjct: 155 VPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHIRSNSLKIVPMRLFQDCRNLEFLDLGYN 214
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ S+ L NL L L N + + L+
Sbjct: 215 RLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIRSMSQGLTWT 274
Query: 119 FH-LKSLFLGGNPIKTVRNDILQ 140
+ ++ L L GN + + + Q
Sbjct: 275 WASIQKLDLSGNDLTEIDAAVYQ 297
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+HL L L HN + S F +R L EL LS N++T L T NL +L L +N
Sbjct: 107 LNHLIWLYLDHNYITSVDGMAFQGVRRLKELILSSNKITSLHNTTFHPVPNLRNLDLSYN 166
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV 111
K+ ++ F L KL L++++N + V + D NL LDL N L +
Sbjct: 167 KLQALQPGQFQGLRKLLSLHIRSNSLKIVPMRLFQDCRNLEFLDLGYNRLRSI 219
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKIN 62
L+ LDL +N+L S + F + LTEL+L +NQ + + + NL L L +N+I
Sbjct: 206 LEFLDLGYNRLRSITRNAFSGLVKLTELHLEHNQFSKINFSHFPRLYNLRALYLQWNRIR 265
Query: 63 NMENDYFLT------------------------LTKLSLLNLKNNKISEVSSNVGD-LIN 97
+M T L L LNL +NK++ VS V D I+
Sbjct: 266 SMSQGLTWTWASIQKLDLSGNDLTEIDAAVYQCLPNLQTLNLDSNKLTNVSQEVVDAWIS 325
Query: 98 LAILDLSDN 106
L + L+ N
Sbjct: 326 LTTISLAGN 334
>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 597
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 118 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 176 RLTALPKEIG-QLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 234
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 235 NLQELYLRNNRLTVFPKEIGQ 255
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 95 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 153
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 154 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQN 212
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 213 LQTLNLSDNQLATLPVEIGQ 232
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 423 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 480
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 481 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 539
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 540 KLQTLDLRNNQLTTLPTEIGQ 560
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++ L+LS KL + LP I +++L ELNL +N LT+LP +NL L L N++
Sbjct: 52 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 109
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L+L N++ + + +G L NL L L N+LT P E+ L +L+
Sbjct: 110 TFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 168
Query: 123 SLFLGGNPIKTVRNDILQ 140
L+L N + + +I Q
Sbjct: 169 KLWLSENRLTALPKEIGQ 186
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 446 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 503
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 504 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 562
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 563 NLQWLYLQNN 572
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 354 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 413
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 414 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 472
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 473 QKLDLSVNQFTTFPKEI 489
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 210 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 268 RLTALPKKMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 316
>gi|410938477|ref|ZP_11370324.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410786402|gb|EKR75346.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 679
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L +D + NK+ S P + + S+T+L+L NQLT +P T NL L L N
Sbjct: 504 LKNLTRIDATRNKI--SSFPNIGSTLESVTDLSLDKNQLTQIPEALTQFPNLKSLGLSDN 561
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + D F KL L+L NN+IS++ ++ L++L + L +N +P L L
Sbjct: 562 QLEEIPADLFENFQKLETLSLSNNRISDLPKSIAQLVSLKSIYLKNNRFVQIPEVLKELK 621
Query: 120 HLKSLFLGGNPI 131
LK + L N I
Sbjct: 622 KLKDVSLNENQI 633
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +L+ L+LS NK+ S L + + EL L N+LT L L LL+ N++
Sbjct: 436 LKYLQNLNLSGNKITQIS-NLNREFSEIIELGLFDNRLTSLDGIGRFPKLKELLIRGNEL 494
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ + +L L+ ++ NKIS + L ++ L L N+LT +P L+ +L
Sbjct: 495 ETISPE-ISSLKNLTRIDATRNKISSFPNIGSTLESVTDLSLDKNQLTQIPEALTQFPNL 553
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI 145
KSL L N ++ + D+ ++ +++
Sbjct: 554 KSLGLSDNQLEEIPADLFENFQKL 577
>gi|302757633|ref|XP_002962240.1| hypothetical protein SELMODRAFT_438024 [Selaginella moellendorffii]
gi|300170899|gb|EFJ37500.1| hypothetical protein SELMODRAFT_438024 [Selaginella moellendorffii]
Length = 262
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKIN 62
++TLD S NK+ LPL ID + +L L L N LT LP +L L L N+++
Sbjct: 44 VRTLDASCNKI--GELPLGIDSLHNLQRLILVENSLTRLPSTFVKLTSLKTLALDSNQLS 101
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ ++ L L +L L++ +N +S + S++G L NL ILD+S N++ +P + S F L+
Sbjct: 102 ELPDEIGL-LVRLERLSIASNHLSSLPSSMGSLRNLVILDISQNQVKVLPESIGSCFSLE 160
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKT 151
+ GN I+ L S +SH+KT
Sbjct: 161 EIQASGNRIEQ-----LPQSLSNLSHLKT 184
>gi|157111144|ref|XP_001651407.1| leucine-rich transmembrane proteins [Aedes aegypti]
gi|108878510|gb|EAT42735.1| AAEL005762-PA [Aedes aegypti]
Length = 596
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN--LTHLLLGFNK 60
SHLKTL L N++ L ++ LT LN+SYNQL + T KN L L L +N+
Sbjct: 228 SHLKTLQLQGNQITIFETDLLSNLPRLTFLNISYNQLEDIADHTFKKNADLRVLDLSYNR 287
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSLF 119
I D F L L + N +N +++++ + D ++ ILDLS N LT + +L
Sbjct: 288 IEKFREDGFKGLVSLEVFNASHNHLTQLNKYIFKDFSSVRILDLSGNRLTYIDNKLFEYS 347
Query: 120 -HLKSLFLGGNPIKTVRNDILQDSKRIIS 147
L+ L L N I + +I +DS+++++
Sbjct: 348 PRLEMLNLSRNSISEIEPNIFEDSRKLLT 376
>gi|91081067|ref|XP_975439.1| PREDICTED: similar to AGAP008611-PA [Tribolium castaneum]
Length = 894
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 75/157 (47%), Gaps = 28/157 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
LS L+TLDLSHN + S S LF +++L LNL+ N LT +P T NL L L N
Sbjct: 224 LSDLRTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNVPSGTFRGLTNLRELNLSGN 283
Query: 60 K------------------------INNMENDYFLTLTKLSLLNLKNNK-ISEVSSNV-G 93
K I + N L + KL L ++NNK + E+ + V
Sbjct: 284 KLMHFTFGLLHFSPELTSLTLDDTHIEELHNSELLGIAKLETLRIRNNKQLREIENYVFA 343
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
D L LD+S N LT +P L++L LK L + NP
Sbjct: 344 DTPRLKELDISGNALTFLPISLANLTTLKRLNISDNP 380
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--------------------- 43
L TLDL+ N + F +L E+NLSYN + LP
Sbjct: 108 LITLDLTSNNVTKLQDYYFQQYTNLKEMNLSYNAIDDLPRYVFVNQSLRILALAHNSLQA 167
Query: 44 ----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINL 98
V + L L + +N I + + +F + LL L NNKI++++SN DL +L
Sbjct: 168 IPFQVFAPMQRLQILDISYNHIVAILDHFFKFNKHIELLALNNNKIAKLTSNALADLSDL 227
Query: 99 AILDLSDNELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
LDLS N + + L SL +LK L L NP+ V
Sbjct: 228 RTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNV 264
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 27/131 (20%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML---------------------- 42
L+ L L+HN L + +F M+ L L++SYN + +
Sbjct: 155 LRILALAHNSLQAIPFQVFAPMQRLQILDISYNHIVAILDHFFKFNKHIELLALNNNKIA 214
Query: 43 ----PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLIN 97
D +L L L N I ++ F +L L LNL NN ++ V S L N
Sbjct: 215 KLTSNALADLSDLRTLDLSHNSIKSISKGLFDSLKNLKYLNLANNPLTNVPSGTFRGLTN 274
Query: 98 LAILDLSDNEL 108
L L+LS N+L
Sbjct: 275 LRELNLSGNKL 285
>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 305
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ +L++N+L + LP I +++L L+L NQLT LP KNL L L N
Sbjct: 112 LKNLQVFELNNNQLTT--LPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +LNL N ++ + + +G L L L+L+ N+LT +P E+ L
Sbjct: 170 KLTTLPKETG-QLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+LG N +KT+ +I Q
Sbjct: 229 SLRELYLGDNQLKTLPKEIGQ 249
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L +N+ + LP I ++SL EL L NQLT LP KNL L N
Sbjct: 66 LKNLQTLNLWNNQFTT--LPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NN+++ + VG L NL L L DN+LT +P E L
Sbjct: 124 QLTTLPAEIG-KLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLK 182
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + + N+I Q K
Sbjct: 183 NLRMLNLSKNLLTILPNEIGQLKK 206
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L +L+ LDL +N+L + LP + +++L +L+L N+LT LP T KNL L L N
Sbjct: 135 LKNLQHLDLWNNQLTT--LPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + N+ L KL LNL N+++ + +G L +L L L DN+L +P E+ L
Sbjct: 193 LLTILPNEIG-QLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLK 251
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L + TV +I Q K
Sbjct: 252 NLRELLLRHKQLTTVPKEIGQLKK 275
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L L NKL + LP +++L LNLS N LT+LP K L L L +N
Sbjct: 158 LKNLYDLSLHDNKLTT--LPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N++ + +G L NL L L +LT VP E+ L
Sbjct: 216 QLTTLPKEIG-QLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQLTTVPKEIGQLK 274
Query: 120 HLKSLFLGGNPI 131
L+ L L NPI
Sbjct: 275 KLRWLLLDANPI 286
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 75 LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +LNL K++ + +G L NL L+L +N+ T +P E+ L L+ L+LG N + T+
Sbjct: 46 VRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTL 105
Query: 135 RNDILQ 140
++ Q
Sbjct: 106 PKEVGQ 111
>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 428
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L +LNL NQLT L KNL L L +N
Sbjct: 277 LQNLHTLNLSGNQLTT--LPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L L N L P E+ L
Sbjct: 335 RLVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 393
Query: 120 HLKSLFLGG 128
+L++L+LGG
Sbjct: 394 NLQTLYLGG 402
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT LP+ +NL L L N
Sbjct: 254 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 312 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 371 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 405
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I +++L LNL NQLT L KNL L L N
Sbjct: 162 LENLQELNLSDNQLTT--LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + VG L NL L+LSDN+LT +P E+ L
Sbjct: 220 QLTTLPIEIG-KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 279 NLHTLNLSGNQLTTLPIEI 297
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|320168780|gb|EFW45679.1| hypothetical protein CAOG_03663 [Capsaspora owczarzaki ATCC 30864]
Length = 862
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC--KNLTHLLLGFN 59
L LK LDL++N+L S S + +T ++L YN+LT + L +LLL N
Sbjct: 204 LQSLKLLDLAYNELTSLSAYATSGLSVVTSIHLQYNKLTSIDSLAFVYRDKLEYLLLDNN 263
Query: 60 KINNMEN---DYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCEL 115
++N + + + F TLT L LNL N+I+ + ++ L +L L + DN LT VP
Sbjct: 264 RLNQITSFSANVFATLTSLIDLNLGANEITSIPTATFAGLTSLQTLYVHDNLLTSVPVAA 323
Query: 116 SSLF--HLKSLFLGGNPIKTV 134
+ F L+ LFL GN I V
Sbjct: 324 MTSFASQLRHLFLVGNKISAV 344
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L T L++N++ S ++SL L+L+YN+LT L + +T + L +N
Sbjct: 180 LTRLATFSLNNNRITSLPEGALTGLQSLKLLDLAYNELTSLSAYATSGLSVVTSIHLQYN 239
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS---NV-GDLINLAILDLSDNELTDVP-CE 114
K+ ++++ F+ KL L L NN++++++S NV L +L L+L NE+T +P
Sbjct: 240 KLTSIDSLAFVYRDKLEYLLLDNNRLNQITSFSANVFATLTSLIDLNLGANEITSIPTAT 299
Query: 115 LSSLFHLKSLFLGGNPIKTV 134
+ L L++L++ N + +V
Sbjct: 300 FAGLTSLQTLYVHDNLLTSV 319
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L+ L+TL L +N + S + F + LTE+++ N++T +P L L +N
Sbjct: 108 LTSLQTLWLYNNNITSLAANAFSGLSLLTEMDMHGNRITTIPTTAFPGLSKLNTFYLHYN 167
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSS 117
+I ++ F LT+L+ +L NN+I+ + + L +L +LDL+ NELT + +S
Sbjct: 168 QITSIAIQAFKDLTRLATFSLNNNRITSLPEGALTGLQSLKLLDLAYNELTSLSAYATS 226
Score = 40.8 bits (94), Expect = 0.56, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC---TDCKNLTHLLLGF 58
L+ L L+L N++ S F + SL L + N LT +PV + L HL L
Sbjct: 279 LTSLIDLNLGANEITSIPTATFAGLTSLQTLYVHDNLLTSVPVAAMTSFASQLRHLFLVG 338
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI----NLAILDLSDNELTDVP 112
NKI+ + + F L +L L L +N+I+ + +N + +L L + N T +P
Sbjct: 339 NKISAVSSTDFAGLPRLKSLGLTSNQITSLPANAFQALTTNTDLYALYMESNPFTTLP 396
>gi|363742183|ref|XP_417690.3| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
[Gallus gallus]
Length = 590
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL F +R L L+L N L +P V DC+NL L LG+N
Sbjct: 132 VPNLRNLDLSYNKLQVLQSEQFKGLRKLLILHLRSNSLKTVPIRVFQDCRNLDFLDLGYN 191
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ ++ L NL + L N + + L+
Sbjct: 192 RLRSLSRNAFAGLLKLTELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWT 251
Query: 119 F-HLKSLFLGGNPIKTVRNDILQ 140
+ L +L L GN I + Q
Sbjct: 252 WSSLHNLDLSGNDITGIEPGTFQ 274
>gi|312385780|gb|EFR30198.1| hypothetical protein AND_00352 [Anopheles darlingi]
Length = 1926
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL LS NK+ LF +R LTELNL +N LP + + L L L N
Sbjct: 194 LDNLETLRLSRNKIAQFPAKLFAGLRQLTELNLDHNHAETLPDRLFEELTQLRELQLNHN 253
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSS-NVGDLINLAILDLSDNELTDV-PCELSS 117
+ + + F+ L+ L LNL+ N+++ + L+ L LDL N L + P +
Sbjct: 254 YLTTLSRNAFIGLSSLRKLNLRENELTTIDPLAFSPLVTLTELDLEGNNLKLLSPNTFAP 313
Query: 118 LFHLKSLFLGGNPIK 132
L HL+ L L N I+
Sbjct: 314 LVHLRELILADNYIE 328
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTM--LPVCTDCKNLTHLLLGFNKIN 62
L+TL L +N L +FI + L L+L+ N L LP C + LT +LL N+I
Sbjct: 1566 LRTLVLDNNFLSIFDPSIFIRTQKLRHLHLNGNGLPTSDLPSCENMPELTKILLEENRIT 1625
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN--LAILDLSDNELTDVPCELSSLFH 120
+++ + ++L++ + N+I ++ D ++ L +DLS N LTD+ LS+L
Sbjct: 1626 HVDKNLLSKCQHVTLISFQKNQIVQIEPGSFDTVSSVLEQIDLSHNYLTDISNVLSNLSA 1685
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L + L N ++T+++D S+ +I+ +
Sbjct: 1686 LSVVDLSDNRLRTLQDDAFDGSEALITFFQ 1715
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
L HL+ L L+ N + LF +L L L+ N L L V +NL L L N
Sbjct: 314 LVHLRELILADNYIERLDDALFASNGNLEILKLNNNSLEELQPAVLHSLRNLEDLALQHN 373
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SS 117
+I ++ F T L +L L+ N I +++ + L L LDL DN L+ + +
Sbjct: 374 EIRALDKHLFRTTASLKVLQLEGNVIEKLAPGTFEGLRRLETLDLEDNSLSSIDGGIFVG 433
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINI 177
L L+ L++ N I +R L+ + R +K L+ QNV I
Sbjct: 434 LSALEKLYISENQIAELRAGALRGADR----LKKLELE---QNVVR------------RI 474
Query: 178 DKYKLDRT---KTLTLCK--VINIPESVYMRGMSSQECTIEIN 215
D+ LD T +TLTL + + IPE ++ S +E ++E N
Sbjct: 475 DERFLDDTTQLRTLTLEENLIEEIPERLFANQRSLKELSLENN 517
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 47 DCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSD 105
D NL L+L N + E F TL L L L N + E+ ++ L+ L +LDLSD
Sbjct: 864 DLSNLKTLVLSDNGLGQFEKGIFDTLDGLDELYLSGNPVGELERDIFAKLLGLEVLDLSD 923
Query: 106 NELTDVPCEL-SSLFHLKSLFLGGN 129
LT +P + +L+ L++L LG N
Sbjct: 924 MALTKLPMGMFDNLYDLETLDLGEN 948
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 38/173 (21%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKIN 62
L+ L L+ N L + LP +M LT++ L N++T + + + C+++T + N+I
Sbjct: 1590 LRHLHLNGNGLPTSDLPSCENMPELTKILLEENRITHVDKNLLSKCQHVTLISFQKNQIV 1649
Query: 63 NMENDYFLTLTK-LSLLNLKNNKISEVSSNVGDLINLAILDLSDN--------------- 106
+E F T++ L ++L +N ++++S+ + +L L+++DLSDN
Sbjct: 1650 QIEPGSFDTVSSVLEQIDLSHNYLTDISNVLSNLSALSVVDLSDNRLRTLQDDAFDGSEA 1709
Query: 107 ------------ELTDVPCELSSLFH--------LKSLFLGGNPIKTVRNDIL 139
ELT V LS+L L+ L++ NP++T+R+D+
Sbjct: 1710 LITFFQHIPYLKELTLVNNSLSTLEQGVFDYLGLLEELYIRDNPLRTLRSDLF 1762
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
++ L TL LS N + LF M+ LT+LN+ N++ +L D +L L L +N
Sbjct: 1358 ITGLVTLRLSRNHIKVLPAKLFAGMKQLTDLNVDRNRIEVLFDRSFEDLTSLKELYLSYN 1417
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSL 118
+ N+ ++ F +N++ ++ L++L LDL N L ++P EL +
Sbjct: 1418 FLQNLTDNSF------------DNRLQTIAPETFASLVSLKKLDLEKNILQNLPKELFNR 1465
Query: 119 -FHLKSLFLGGNPIKTVRNDIL 139
L+ L LG N I ++ ++I
Sbjct: 1466 NGKLQILRLGANNIGSLDSEIF 1487
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
+ L+TL L N + LF + RSL EL+L N + LP F I+
Sbjct: 483 TQLRTLTLEENLIEEIPERLFANQRSLKELSLENNNIKELPDGL-----------FGAIS 531
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCEL-SSLFHL 121
+ L L L +N + ++ V DL L +LDLSDN D+P + + + L
Sbjct: 532 SC----------LEELYLADNDLEVLTPAVLDLPRLELLDLSDNNFRDLPDNMFAKVKQL 581
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKT 151
L+L GN + D + D+ R ++ + T
Sbjct: 582 HELYLDGNML-----DEVPDALRALTRLST 606
>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
Length = 582
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 2 LSHLKTLDLSHNKLVS--DSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+TL LS N L S DSL +++ L ++L +N+L +P V +LT L L F
Sbjct: 145 LVNLETLALSENSLTSLPDSLG---NLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRF 201
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+I ++E D L+ L++L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 202 NRITSVEKD-IKNLSNLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNC 260
Query: 119 FHLKSLFLGGN 129
+ L L N
Sbjct: 261 TQITKLDLQHN 271
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 28/151 (18%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP------VCTDC--------K 49
L L++ N+L S LPL F S+ ELNL+ NQL +P V + +
Sbjct: 381 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLR 438
Query: 50 NLTH----------LLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
NL H L L NK+ ++ N+ L L L L NN++S + +G LINL
Sbjct: 439 NLPHGIGNLRKLRELDLEENKLESLPNE-IAYLRDLQRLILTNNQLSTLPRGIGHLINLT 497
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
L L +N LT +P E+ +L +L+ L+L NP
Sbjct: 498 HLGLGENFLTQLPEEIGTLENLEELYLNDNP 528
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP--VCTDCKNLTHLLLG- 57
LS LK+L L +N+L ++P + S L ELNL N ++ LP + + NLT L L
Sbjct: 283 LSTLKSLGLRYNRL--SAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLAR 340
Query: 58 -----------------------FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD 94
N+IN + F LS LN+K+N+++ + + G
Sbjct: 341 NCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++ L+L+ N+L +P ++S L L+ L L N ++ + + I
Sbjct: 401 WTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGI 444
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L +L +++L++N
Sbjct: 121 ELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLP-DSLGNLKQLRMVDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ V L +L L L N +T V ++ +L +L L + N IK + +I
Sbjct: 180 KLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEI 234
>gi|302796795|ref|XP_002980159.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
gi|300152386|gb|EFJ19029.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
Length = 584
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 1 MLSHLKTLDLSHN-------------------------KLVSDSLPLFIDMRSLTELNLS 35
ML+ LKTLD+SHN K ++ ++ L +D L EL LS
Sbjct: 89 MLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNNQIKELASTIGLCVD---LAELKLS 145
Query: 36 YNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD 94
N LT LP C L L + NKI + F +L L+ LN N I+E+ +G+
Sbjct: 146 NNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGN 205
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L L LDL N++ +P L + L + G N + ++ N+I
Sbjct: 206 LTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEI 249
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 28/165 (16%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFN 59
S L +L + NK+ LF + +LTELN N +T LP + NLT LL L N
Sbjct: 160 SRLISLSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELP--EEIGNLTRLLRLDLHQN 217
Query: 60 KINNMEND----------YFL------------TLTKLSLLNLKNNKISEVSSNVGDLIN 97
KI ++ + YF L L +L N++SE + +
Sbjct: 218 KIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSM-R 276
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDS 142
L++LDLS+N L+ +P EL + L+ L L GNP++T+R ++ S
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGS 321
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLS--YNQLTMLPVCTDCKNLTHLLLGFN 59
L +LK L+L+ N +V+ F + +L L+LS QL P + L L L
Sbjct: 426 LPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLLPPPCLSLMTGLQELRLMRT 485
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV--SSNVGDLINLAILDLSDNELTDVPCELSS 117
++ + D ++ L +L+L N IS + +S + I L LDL+DN L+ +P +L
Sbjct: 486 QMAAIPWD-LPRMSSLRILDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPPQLGY 544
Query: 118 LFH-LKSLFLGGNPIKTVRNDILQDSKRII 146
L L+ L + GNP++++R IL+ + +
Sbjct: 545 LEPTLRKLKVDGNPLRSIRRGILERGTKAL 574
>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 428
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L +LNL NQLT L KNL L L +N
Sbjct: 277 LQNLHTLNLSGNQLTT--LPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYN 334
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L L N L P E+ L
Sbjct: 335 RLVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 393
Query: 120 HLKSLFLGG 128
+L++L+LGG
Sbjct: 394 NLQTLYLGG 402
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT LP+ +NL L L N
Sbjct: 254 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSN 311
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 312 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 370
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 371 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 405
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I +++L LNL NQLT L KNL L L N
Sbjct: 162 LGNLQELNLSDNQLTT--LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 219
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + VG L NL L+LSDN+LT +P E+ L
Sbjct: 220 QLTTLPIEIG-KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ 278
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 279 NLHTLNLSGNQLTTLPIEI 297
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 70 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 128 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQ 186
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 187 NLQTLNLKSNQLTTLFKEIEQ 207
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS T LP + KNL L L N++ + + L L LNL +N+++ +
Sbjct: 53 LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 111
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155
>gi|428169946|gb|EKX38875.1| hypothetical protein GUITHDRAFT_114981 [Guillardia theta CCMP2712]
Length = 579
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 20/149 (13%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L +L+ SHN L SLP + ++ +LT L++ N LT ++ LLLGFNKI
Sbjct: 268 LTSLEASHNLL--QSLPDGLRNLSNLTRLDVRENCLTSATSLPHAPRMSELLLGFNKIQT 325
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSS-------------NVG---DL-INLAILDLSDN 106
+ L LS+L++++N IS + + N+G D+ + L +LD+ +N
Sbjct: 326 FPPNLGDRLKSLSVLDIRDNAISNLEASDLTGLKVSMLVDNLGAPSDIDMKLKMLDVRNN 385
Query: 107 ELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
E+ VP EL + L S+ L GNP+KT+R
Sbjct: 386 EIKMVPPELGLMTTLTSILLDGNPLKTMR 414
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFNK 60
+S LK LDLS N L + LF L L+++ N+L T+ P T C L+ L + N+
Sbjct: 126 VSELKKLDLSLNALSNLPDDLFASFSLLQTLHVANNKLQTLPPSLTSCPELSKLNIQHNQ 185
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L+ LS L + +N I + +G L NL S+N+L +P L L
Sbjct: 186 FATLPG-FVGHLSCLSSLQVDHNAIHTLPEEIGLLHNLDTFTCSNNQLQQLPSSLGHLTS 244
Query: 121 LKSLFLGGNPIKTV 134
L L + N I+ +
Sbjct: 245 LTFLNMSSNRIEAI 258
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKIN 62
L L++ HN+ + LP F+ S L+ L + +N + LP + L H L F N
Sbjct: 175 ELSKLNIQHNQFAT--LPGFVGHLSCLSSLQVDHNAIHTLP---EEIGLLHNLDTFTCSN 229
Query: 63 NMENDYFLTL---TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
N +L T L+ LN+ +N+I + VG+L++L L+ S N L +P L +L
Sbjct: 230 NQLQQLPSSLGHLTSLTFLNMSSNRIEAIPGTVGNLLSLTSLEASHNLLQSLPDGLRNLS 289
Query: 120 HLKSL 124
+L L
Sbjct: 290 NLTRL 294
>gi|81175489|gb|ABB59082.1| variable lymphocyte receptor A [Eptatretus stoutii]
Length = 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L+L +NKL S F ++SLT L+LSYN+L LP V + KNL L L N++ +
Sbjct: 64 LELDYNKLSSLPSKAFHGLQSLTYLSLSYNELQTLPAGVFDELKNLETLWLEQNQLQTLP 123
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHLKS 123
F L L L L+ N++ + + D L L IL LS NEL +P L LK
Sbjct: 124 VGVFDHLVNLDKLYLRQNQLKSLPQGIFDHLTKLTILWLSYNELQRLPEGAFDFLEKLKM 183
Query: 124 LFLGGNPIKTVRNDIL------QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
L L NP DIL ++ K +S+I+ + DGG + E T E
Sbjct: 184 LQLTNNPWDCSCRDILYLSNWIREKKGTVSNIEAAE-------CDGGTKAVLEITEE 233
>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 430
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L +LNL NQLT L KNL L L +N
Sbjct: 279 LQNLHTLNLSGNQLTT--LPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYN 336
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L L N L P E+ L
Sbjct: 337 RLVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 395
Query: 120 HLKSLFLGG 128
+L++L+LGG
Sbjct: 396 NLQTLYLGG 404
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT LP+ +NL L L N
Sbjct: 256 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSN 313
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 314 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 372
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 373 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 407
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L +L+ L+LS N+L + LP I +++L LNL NQLT L KNL L L N
Sbjct: 164 LGNLQELNLSDNQLTT--LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL +N+++ + VG L NL L+LSDN+LT +P E+ L
Sbjct: 222 QLTTLPIEIG-KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ 280
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L +L L GN + T+ +I
Sbjct: 281 NLHTLNLSGNQLTTLPIEI 299
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N+L +LP I +++L ELNLS NQLT+LP +NL L L N
Sbjct: 72 LKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N+++ + G L NL L+LSDN+LT +P E+ L
Sbjct: 130 RLTILPIEIG-KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQ 188
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L++L L N + T+ +I Q
Sbjct: 189 NLQTLNLKSNQLTTLFKEIEQ 209
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 32 LNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
LNLS T LP KNL L L N++ + + L L LNL +N+++ +
Sbjct: 55 LNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIG-QLKNLQELNLSSNQLTILPK 113
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+G L NL LDL DN LT +P E+ L +L++L+L N + T+
Sbjct: 114 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 157
>gi|320168281|gb|EFW45180.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 794
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L TL L N++ S F D+ +LT L+L NQ++ +P T LT L L N
Sbjct: 102 LTALNTLQLFSNQITSIPANAFADLAALTSLDLFVNQISSIPANAFTGLSALTQLRLNTN 161
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVP-CELSS 117
+I ++ ++ F LT L+ L L +N+++ +S+N L L L L N +T P +S
Sbjct: 162 QITSIPDNVFADLTSLNGLGLSSNQLTVISANAFNGLTALTSLMLGLNPMTVFPSAAFAS 221
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
L L+SL + I ++ D D + S
Sbjct: 222 LTALESLQMEAGQIASISADTFPDLTALTS 251
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 30 TELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
T L+L NQ+T +P + L L+L N+I ++ + F LT L+ L L +N+I+
Sbjct: 58 TTLSLYSNQITSIPANAFSGLTALATLMLHGNQITSIPANAFSGLTALNTLQLFSNQITS 117
Query: 88 VSSNV-GDLINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTVRNDILQD 141
+ +N DL L LDL N+++ +P + L L L L N I ++ +++ D
Sbjct: 118 IPANAFADLAALTSLDLFVNQISSIPANAFTGLSALTQLRLNTNQITSIPDNVFAD 173
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-----------CTDCKN 50
L+ L LDLS N++ S S F + +L ++L N+LT +P KN
Sbjct: 294 LTALTALDLSVNQINSLSANTFSGLTALLYVHLGANRLTSIPADALARLPAGAGVDLSKN 353
Query: 51 LTH---------------LLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GD 94
L L+L N I + F ++ L LL L NN I+ +S+N
Sbjct: 354 LISSVSADEFAGLTALGGLVLSSNLITTIPAGAFASMNALILLALDNNTITSISANAFTG 413
Query: 95 LINLAILDLSDNELTDVPCE-LSSLFHLKSLFLGGNPIKTV 134
L L L L N++T +P + +SL L+ L L GN I +V
Sbjct: 414 LTALQYLYLGLNQITSIPVDAFTSLTALQYLRLDGNQITSV 454
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L L LS N + + F M +L L L N +T + T L +L LG N
Sbjct: 366 LTALGGLVLSSNLITTIPAGAFASMNALILLALDNNTITSISANAFTGLTALQYLYLGLN 425
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCEL 115
+I ++ D F +LT L L L N+I+ V ++ DL L L L+ N T +P L
Sbjct: 426 QITSIPVDAFTSLTALQYLRLDGNQITSVPATAFADLTALVGLTLNGNLFTTLPPAL 482
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L+ L++L + ++ S S F D+ +LT +NL N +T + T L + L N
Sbjct: 222 LTALESLQMEAGQIASISADTFPDLTALTSINLRDNPITTIAANAFTGLSALKMIYLQNN 281
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
I ++ F LT L+ L+L N+I+ +S+N L L + L N LT +P + L+
Sbjct: 282 LITSISATAFTGLTALTALDLSVNQINSLSANTFSGLTALLYVHLGANRLTSIPADALAR 341
Query: 118 LFHLKSLFLGGNPIKTVRND 137
L + L N I +V D
Sbjct: 342 LPAGAGVDLSKNLISSVSAD 361
>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 353
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L LS+N+L ++LP ID + SL L L NQ + LP + +NL L LG N
Sbjct: 164 LRNLQFLHLSNNQL--NTLPAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNN 221
Query: 60 KIN---------------NMENDYF-------LTLTKLSLLNLKNNKISEVSSNVGDLIN 97
++N ++ N +F L+KL L L N++S + + +G+L
Sbjct: 222 QLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSE 281
Query: 98 LAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
L LDLS+N+ + +P E+S+L L+ L L N ++ +I
Sbjct: 282 LQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSLPKEI 322
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L+ LDL +N+L +SLP + ++R L L+L+ NQL+ LP + +L L LG N
Sbjct: 95 LSSLQWLDLENNQL--NSLPEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L L+L NN+++ + + + +L +L L L +N+ + +P ++ +L
Sbjct: 153 QLSTLP-EQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLALDNNQFSSLPGQVWNLR 211
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
+L+ L LG N + ++ +I S+ H++ S
Sbjct: 212 NLQFLALGNNQLNSLPAEIGNLSELSSLHLRNS 244
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ LDL++N+L SLP I ++ SL L L NQL+ LP + +NL L L N
Sbjct: 118 LRDLQVLDLANNQL--SSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNN 175
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++N + L L L L NN+ S + V +L NL L L +N+L +P E+ +L
Sbjct: 176 QLNTLP-AKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLS 234
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
L SL L + ++ + SK
Sbjct: 235 ELSSLHLRNSHFSSLPRQVWNLSK 258
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L +N+L +SLP I ++ L+ L+L + + LP + L HL L N
Sbjct: 210 LRNLQFLALGNNQL--NSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSKLRHLGLTLN 267
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++++ + L++L L+L NN+ S + + + +L +L L+LS+N+ + +P E+S+L
Sbjct: 268 QLSSLPAEIG-NLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSLPKEISNLS 326
Query: 120 HLKSLFLGGNPIKTVRNDIL 139
L+ L LG N +T+ +++
Sbjct: 327 SLQWLNLGDNLSQTLEAELI 346
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 28 SLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKIS 86
SL L L+ NQL LP + +L L L N++N++ + L L +L+L NN++S
Sbjct: 74 SLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLP-EQVRNLRDLQVLDLANNQLS 132
Query: 87 EVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
+ +G+L +L L L DN+L+ +P ++ +L +L+ L L N + T+
Sbjct: 133 SLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTL 180
>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 595
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQKLYLRNNRLTVFPKEIGQ 253
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRL 154
L++L L N + T+ +I LQ+ +++ +++ +RL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQKL--YLRNNRL 244
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 467 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 525 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNLK N ++ + +G L NL LDL DN+L P + L L+SL L N +
Sbjct: 70 LKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 129
Query: 132 KTVRNDI 138
+ N+I
Sbjct: 130 IILPNEI 136
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L +L L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
Length = 1530
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L HLK LD+S NK D++P + ++SL L++ N +T LP + L L N
Sbjct: 55 LQHLKILDISQNKF--DNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCN 112
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + D L L+ LN+ NN I+ +S ++ L NL IL +SDN L +VP L L
Sbjct: 113 QIKTVP-DAVYKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLYHLN 171
Query: 120 HLKSLFLGGNPIKTVRNDI 138
LK L + GN I ++ +I
Sbjct: 172 KLKLLDIRGNNISSIATEI 190
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L L+ L +S NKL ++P I +R L EL++ N + +LP + K L L L N
Sbjct: 239 LDQLEILIVSSNKL--HTIPSDIYQLRKLRELDVGSNDIRILPDISQLKKLEILNLSCNH 296
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + + LT L LN+++N I+ +S+N+ +L +L +L++S+N+L ++P + L
Sbjct: 297 LEKIPSSIY-KLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLKT 355
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L +G N I ++ +I Q
Sbjct: 356 LKKLDMGNNRITSLLPEIAQ 375
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L L+ ++LSHN++ +++P I+ S L +LN+S N +T L + K+L L + FN
Sbjct: 790 QLKQLRKINLSHNQM--NAVPAAINQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFN 847
Query: 60 KINNMENDYFL-TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ E + L L +L +LN+ +N IS + N+ +L NL L+L + L ++P L L
Sbjct: 848 QV--QEVPFSLCKLHQLKVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSALGHL 905
Query: 119 FHLKSLFLGGN 129
LK L + N
Sbjct: 906 SKLKVLDIRDN 916
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L+ L LS N++ L+ ++SL EL++ N+++ L + +NL L + N
Sbjct: 423 LDQLEKLVLSDNQIEEIPTSLY-QLKSLKELDMRKNKISSLSADISKLENLEILNISGNI 481
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
++ + + L KL L++++N ++E+SS + L L IL +S+N+L D+P + L +
Sbjct: 482 LDEVPASVY-QLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGN 540
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
LK L + GN +K V +I Q
Sbjct: 541 LKKLEIEGNKLKYVSPEIFQ 560
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L+ L+ L +S NKL + P+ ++ L +L++ N ++ +LP + L L + +N
Sbjct: 652 QLTQLEVLIVSCNKL-PNVPPVVYKLKGLKKLDIGNNIISSILPDIHELNQLQVLNVSYN 710
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++ + + L +L L+L++NKI+ +V L L +LD+SDN+L ++P L L
Sbjct: 711 QLQDVTPNIY-RLRQLKRLDLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLK 769
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+K L +G N I ++ +D+ Q
Sbjct: 770 SMKELNVGSNEIISLSSDLSQ 790
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 28 SLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
S E++L Q++ + C+ NL L LG N ++ + D TL L +L++ NK
Sbjct: 10 SAEEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALP-DKISTLQHLKILDISQNKF 68
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ S V L +L ILD+ N +T +P E+S L L+ L N IKTV + +
Sbjct: 69 DNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAV 121
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGF 58
L L+TL +S N L L+ ++R L EL+ N++T L +C K L L++
Sbjct: 560 QLQKLETLIVSGNNLQGIPNALY-NLRKLKELDARNNKITYLSAEIC-QLKQLQRLVVSG 617
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N ++ + L KL +N+++N ++ + + L L +L +S N+L +VP + L
Sbjct: 618 NILHEIPTS-ICKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKL 676
Query: 119 FHLKSLFLGGNPIKTVRNDI 138
LK L +G N I ++ DI
Sbjct: 677 KGLKKLDIGNNIISSILPDI 696
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L LK LD+ NK+ S S + + +L LN+S N L +P + L L + N
Sbjct: 445 QLKSLKELDMRKNKISSLSADIS-KLENLEILNISGNILDEVPASVYQLRKLKKLDMRSN 503
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + ++ L L +L + NNK+ ++ +V L NL L++ N+L V E+ L
Sbjct: 504 MLTEISSE-ISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQ 562
Query: 120 HLKSLFLGGNPIKTVRN 136
L++L + GN ++ + N
Sbjct: 563 KLETLIVSGNNLQGIPN 579
>gi|116331762|ref|YP_801480.1| hypothetical protein LBJ_2245 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116125451|gb|ABJ76722.1| Leucine-rich repeat protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGF 58
L +L+ L L N+L LP ++ ++L +L+L NQLT+LP +NL L LG
Sbjct: 14 QLQNLRELYLYSNQLTV--LPKELERFKNLQKLDLYSNQLTILPDEIGQLQNLEELALGA 71
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + N+ L L L+L N+++ + +G L L LDLS+N+LT +P E+ L
Sbjct: 72 NQLRTIPNEIG-QLKDLQELHLDGNQLTILPKEIGQLKKLEKLDLSNNQLTTLPKEIEHL 130
Query: 119 FHLKSLFLGGN 129
+L+ L L GN
Sbjct: 131 KNLRRLVLKGN 141
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L L L +N+++ + + NL LDL N+LT +P E+ L +L+ L LG N +
Sbjct: 15 LQNLRELYLYSNQLTVLPKELERFKNLQKLDLYSNQLTILPDEIGQLQNLEELALGANQL 74
Query: 132 KTVRNDILQ 140
+T+ N+I Q
Sbjct: 75 RTIPNEIGQ 83
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+++L EL L NQLT+LP E + F L KL L + N+
Sbjct: 14 QLQNLRELYLYSNQLTVLP--------------------KELERFKNLQKLDLYS---NQ 50
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
++ + +G L NL L L N+L +P E+ L L+ L L GN + + +I Q K
Sbjct: 51 LTILPDEIGQLQNLEELALGANQLRTIPNEIGQLKDLQELHLDGNQLTILPKEIGQLKK 109
>gi|76162392|gb|ABA40262.1| variable lymphocyte receptor diversity region [Petromyzon marinus]
Length = 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L L L NKL F + LT L+LS NQL+ +P V N+ L L N
Sbjct: 52 LTALTELKLHSNKLKDIPSGAFHKLTQLTYLSLSDNQLSAIPAGVFDHIVNMQKLYLHGN 111
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SS 117
+++ + F LT+L++L+L +N++S + + V D LINL L L++N+LT +P +
Sbjct: 112 QLSALPPGVFDKLTRLTILSLYDNQLSALPAGVFDRLINLEELWLNNNQLTSIPAGVFDK 171
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
L + ++L NP +DIL S + H + C +
Sbjct: 172 LTQITHIWLYNNPWNCACSDILYLSSWLGQHAGKEQGQAVCSGTN 216
>gi|47217592|emb|CAG02519.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL F+ +R L L+L N L +P V DC+NL L +G+N
Sbjct: 102 VPNLRNLDLSYNKLQVLQPNQFLGLRKLLSLHLRSNSLKTIPMRVFLDCRNLEFLDMGYN 161
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNE---LTDVPCEL 115
++ ++ + F L KL L+L++N++S+++ ++ L NL +L L N LT P +
Sbjct: 162 RLRSLTRNAFAGLLKLIELHLEHNQLSKINLAHFPRLSNLRVLYLQWNRVKVLTQGPPWM 221
Query: 116 SSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSS-QESTSE 174
+ L+ L L GN ++ + Q + +++T N+D +S+ T E
Sbjct: 222 WT--SLQKLDLAGNELQVLDPSTFQ----CLPNLQT-------LNLDSNKLSNISRQTLE 268
Query: 175 INIDKYKLDRTKTLTLCKVINIPESVYMRGM-SSQECTI------EINIDKYKLDRTKTL 227
I + L LC P +++ SQE T+ E +K D +T
Sbjct: 269 AWISLTSVSLAGNLWLCNPNVCPLVAWIQAFKGSQESTLICSGPKEAQGEKVT-DIVRTY 327
Query: 228 TLCKVINIPES 238
+C +P +
Sbjct: 328 NMCAPTQVPST 338
>gi|225470150|ref|XP_002267120.1| PREDICTED: probable disease resistance protein At5g63020-like
[Vitis vinifera]
Length = 897
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK-INNMENDYFLTLTKLSLLN 79
P F+ ++L N++ L C NL+ LLL N + + N +F + L +L+
Sbjct: 509 PDFVKWTMTERISLMDNRIEKLTGSPTCPNLSTLLLDLNSDLEMISNGFFQFMPNLRVLS 568
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L KI E+ S++ +L++L LDL E+ +P E+ +L LK+ L + + ++ ++
Sbjct: 569 LAKTKIVELPSDISNLVSLQYLDLYGTEIKKLPIEMKNLVQLKAFRLCTSKVSSIPRGLI 628
Query: 140 QDSKRIISHIKTSRLDYHC---QNVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVINI 196
S ++ + Y+C V GG+ S ++ S I +L+ K LT +V
Sbjct: 629 -SSLLMLQGVGM----YNCGLYDQVAEGGVESYDNESLIE----ELESLKYLTHLRVTIA 679
Query: 197 PESVYMRGMSSQE---CTIEINIDKYK 220
SV+ R +SS++ CT I + +K
Sbjct: 680 SASVFKRFLSSRKLPSCTHAICLKIFK 706
>gi|1946300|emb|CAA73132.1| hypothetical protein [Silene latifolia]
Length = 581
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 26/161 (16%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP------------------- 43
+ L +D+ NKL + P+ L+ELN S N LT LP
Sbjct: 160 TKLLKVDIEGNKLTTLLDPVVGSWSMLSELNASKNLLTGLPETIGTLVRLIRLDLHQNRI 219
Query: 44 -----VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
C +L +G N ++++ ++ L++LS+L+L++N+++E + L L
Sbjct: 220 KSIPSSIKGCSSLVEFFIGSNLLSSLPSELG-ELSQLSVLDLRSNQLTEYPAEACKL-RL 277
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
++LDLS+N L+ +P E+ + L+ L L GNP++T+R+ ++
Sbjct: 278 SVLDLSNNSLSGLPAEIGLMTSLRKLVLIGNPMRTIRSTLV 318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 43 PVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILD 102
P ++L L L K+ + +D L L KL +L+L N + + +L +L LD
Sbjct: 470 PAFASLQHLVELYLRRVKLQEVPSD-ILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELD 528
Query: 103 LSDNELTDVPCELSSL-FHLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
LSDN + +P EL L L++L L GNP++++R IL + +K ++ ++K
Sbjct: 529 LSDNSIGTLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLQYLK 578
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 21 PLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
P + +T+++LS N + LPV + C +L L+L NKI + D +L L+ L
Sbjct: 375 PEVCESNEITKVDLSKNSIQELPVTLSACSSLEVLILSRNKIKDWPEDALKSLPNLTCLR 434
Query: 80 LKNNKISEVSSNVGDLI-NLAILDLSD--NELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L NN +++V N D + L ILDLS + L D P +SL HL L+L ++ V +
Sbjct: 435 LDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDNPA-FASLQHLVELYLRRVKLQEVPS 493
Query: 137 DIL 139
DIL
Sbjct: 494 DIL 496
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 29 LTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISE 87
LT LN+S+N+LT LP + +L L + FN + N+ + + T L ++ NN++ E
Sbjct: 70 LTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNIPAEIG-SATSLVKMDCSNNQLKE 128
Query: 88 VSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
+ S++G ++LA L S+N + +P +L+ L + + GN + T+ + ++ S ++S
Sbjct: 129 LPSSLGQCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVV-GSWSMLS 187
Query: 148 HIKTSR 153
+ S+
Sbjct: 188 ELNASK 193
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 50 NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+L L+L N I ++ D L L++LN+ +NK++++ + +G+L +L LD+S N LT
Sbjct: 46 DLQKLILAHNNIEVLKED-LKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLT 104
Query: 110 DVPCELSSLFHLKSLFLGGNPIKTVRNDILQ 140
++P E+ S L + N +K + + + Q
Sbjct: 105 NIPAEIGSATSLVKMDCSNNQLKELPSSLGQ 135
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV----CTD--------- 47
L LK+LD+S N L + +P I SL +++ S NQL LP C D
Sbjct: 90 LPSLKSLDVSFNLLTN--IPAEIGSATSLVKMDCSNNQLKELPSSLGQCLDLAELKASNN 147
Query: 48 -----------CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
C L + + NK+ + + + + LS LN N ++ + +G L+
Sbjct: 148 LIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVVGSWSMLSELNASKNLLTGLPETIGTLV 207
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-D 155
L LDL N + +P + L F+G N + ++ +++ + S+ + +++++L +
Sbjct: 208 RLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSNLLSSLPSELGELSQLSVLDLRSNQLTE 267
Query: 156 YHCQ 159
Y +
Sbjct: 268 YPAE 271
>gi|196003282|ref|XP_002111508.1| predicted protein [Trichoplax adhaerens]
gi|190585407|gb|EDV25475.1| predicted protein [Trichoplax adhaerens]
Length = 345
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LS L TL+ +NK+ + + + L NL +N+L LP NL L L N
Sbjct: 34 LSELDTLEARNNKITYLPTEMAL-LAKLASFNLGFNELCELPKNLMYLSNLRKLHLFNNN 92
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + + L +L+LLNL NKI ++ +G L+NL L L DN+L ++P E L +
Sbjct: 93 ITELSGEVIGNLKQLTLLNLNRNKIQQLPKEIGRLVNLEFLSLDDNQLVELPDEFCKLTN 152
Query: 121 LKSL 124
LK L
Sbjct: 153 LKEL 156
>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
Length = 629
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L+ L L+ N L S LP + + + L L+L +N+L +P V + LT L L FN
Sbjct: 193 LVNLRNLALNENSLTS--LPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFN 250
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I + D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ +
Sbjct: 251 RITAVA-DNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 309
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY------HCQ-----NVDGGGMSS 168
+L +L L N + + + I + ++ +RL +C+ NV+G GM+
Sbjct: 310 NLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQ 369
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 7 TLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
+++L HN++ D +P +F + LT+LN+ N LT LP+ N+ L L N +
Sbjct: 407 SINLEHNRI--DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 464
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ +D + L L +L L NN + ++ + +G++ L ILDL +N + +P E+ L L+
Sbjct: 465 LPDD-IMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQR 523
Query: 124 LFLGGNPIKTVRNDI 138
L L N I + I
Sbjct: 524 LILQTNQITMLPRSI 538
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+ + LT + LS NQ T P + N+ + L N+I+ + F L+ LN
Sbjct: 374 MLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 433
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+K N ++ + ++G +N+ L+L+ N L +P ++ +L +L+ L L N +K + N I
Sbjct: 434 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 493
Query: 140 QDSKRIISHIKTSRLD 155
K I ++ +R++
Sbjct: 494 NMRKLRILDLEENRIE 509
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFNK 60
LK LDL HNKL ++ P+ +R+LT L L +N++T V + + NLT L L NK
Sbjct: 218 QLKVLDLRHNKL-AEIPPVIYRLRTLTTLYLRFNRITA--VADNLRQLVNLTMLSLRENK 274
Query: 61 INNMEN--DYFLTLT--------------------KLSLLNLKNNKISEVSSNVGDLINL 98
I + + + LT LS L+L++N++ ++ ++G+L +L
Sbjct: 275 IRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSL 334
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L N L+ VP L + + + GN + + + +L S ++ I SR +
Sbjct: 335 VRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLA-SLSGLTTITLSRNQF-- 391
Query: 159 QNVDGGGMSSQESTSEINIDKYKLDR 184
+ GG + + IN++ ++D+
Sbjct: 392 TSYPTGGPAQFTNVYSINLEHNRIDK 417
>gi|418666002|ref|ZP_13227434.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410758251|gb|EKR19849.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L +LNL NQLT L KNL L L +N
Sbjct: 70 LQNLHTLNLSGNQLTT--LPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ + +G L NL L L N L P E+ L
Sbjct: 128 RLVILPKEIG-QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 186
Query: 120 HLKSLFLGG 128
+L++L+LGG
Sbjct: 187 NLQTLYLGG 195
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L TL+LS N+L + LP+ I +++L LNLS NQLT LP+ +NL L L N
Sbjct: 47 LQNLHTLNLSDNQLTT--LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSN 104
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L N++ + +G L NL L+L +N+LT +P E+ L
Sbjct: 105 QLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ 163
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQ 159
+L++L L N + T +I Q + +++T L H Q
Sbjct: 164 NLQTLSLYKNRLMTFPKEIGQ-----LKNLQTLYLGGHNQ 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 23/113 (20%)
Query: 26 MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKI 85
M++L LNLS NQLT LP+ +I ++N L LNL +N++
Sbjct: 1 MKNLQTLNLSDNQLTTLPI---------------EIGKLQN--------LHTLNLSDNQL 37
Query: 86 SEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
+ + VG L NL L+LSDN+LT +P E+ L +L +L L GN + T+ +I
Sbjct: 38 AILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 90
>gi|284010617|dbj|BAI66788.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFNKINN 63
K LDL +NKL S F + SLT L+L N+L LPV NL L L N++ +
Sbjct: 43 KKLDLKYNKLSSLPDTAFHGLSSLTYLSLFNNELQTLPVGVFDHLVNLDKLYLYQNQLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHL 121
+ F LTK++ L+L NNK+ + + V D L NL L L +N+L VP SL ++
Sbjct: 103 LPEGVFDKLTKITNLDLNNNKLERLPNGVFDKLTNLKELWLRNNQLRSVPNRAFDSLSNI 162
Query: 122 KSLFLGGNPIKTVRNDIL 139
K+L+L NP DIL
Sbjct: 163 KTLWLDTNPWDCSCKDIL 180
>gi|350415559|ref|XP_003490679.1| PREDICTED: leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein
2-like [Bombus impatiens]
Length = 908
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ +DLS N+L +F +SL L+LS N L LP KNL L+L N
Sbjct: 166 LDWLEEIDLSRNRLSVLPYQVFALCKSLARLDLSGNLLVSLPDHSFRPNKNLQELVLSAN 225
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPC-ELSS 117
++ + F L +L +L L +N+I V + DL++L LDLS N +T + S
Sbjct: 226 RLTKLPPRLFSGLNQLKILELADNEIDTVPRGLFADLVSLQHLDLSGNPITRLTSITFHS 285
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEIN- 176
L +L+ L L P+ + D+ + +++ + + + +N D G+ E T E+N
Sbjct: 286 LSNLRWLSLKNLPVTVLPYDVWRPVRKLRTLLLSGTRLEALRNEDLKGLDKLE-TLEVNN 344
Query: 177 -----IDKYKLDRTKTL 188
I + LDRT L
Sbjct: 345 SPLREISRCTLDRTPAL 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L+ L+L+ N+L + F + L E++LS N+L++LP V CK+L L L N
Sbjct: 142 LQQLQYLNLTGNRLTTLPRASFQGLDWLEEIDLSRNRLSVLPYQVFALCKSLARLDLSGN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLIN-LAILDLSDNELTDVPCEL-SS 117
+ ++ + F L L L N+++++ + +N L IL+L+DNE+ VP L +
Sbjct: 202 LLVSLPDHSFRPNKNLQELVLSANRLTKLPPRLFSGLNQLKILELADNEIDTVPRGLFAD 261
Query: 118 LFHLKSLFLGGNPI 131
L L+ L L GNPI
Sbjct: 262 LVSLQHLDLSGNPI 275
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLT------------------- 40
L+ LK L+L+ N++ D++P LF D+ SL L+LS N +T
Sbjct: 238 LNQLKILELADNEI--DTVPRGLFADLVSLQHLDLSGNPITRLTSITFHSLSNLRWLSLK 295
Query: 41 -----MLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
+LP V + L LLL ++ + N+ L KL L + N+ + E+S
Sbjct: 296 NLPVTVLPYDVWRPVRKLRTLLLSGTRLEALRNEDLKGLDKLETLEVNNSPLREISRCTL 355
Query: 94 DLI-NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
D L +DL D+ LT +P ++ L L L L GNP
Sbjct: 356 DRTPALRKIDLRDSNLTFLPANVAHLSFLSELQLQGNP 393
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 51 LTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELT 109
L HL LG N++ + +D F L +L LNL N+++ + ++ L L +DLS N L+
Sbjct: 121 LAHLNLGDNRLTELPSDVFHPLQQLQYLNLTGNRLTTLPRASFQGLDWLEEIDLSRNRLS 180
Query: 110 DVPCELSSLFH-LKSLFLGGN 129
+P ++ +L L L L GN
Sbjct: 181 VLPYQVFALCKSLARLDLSGN 201
>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 595
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 4 HLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKI 61
+++ L+LS KL + LP I +++L ELNL +N LT+LP +NL L L N++
Sbjct: 49 NVRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQL 106
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ L KL L+L N++ + + +G L NL L L N+LT P E+ L +L
Sbjct: 107 ATFP-AVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNL 165
Query: 122 KSLFLGGNPIKTVRNDILQ 140
+ L+L N + + +I Q
Sbjct: 166 QKLWLSENRLTALPKEIGQ 184
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 467 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 525 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN-----PLSLKERK 319
Query: 120 HLKSLF 125
++ LF
Sbjct: 320 RIQKLF 325
>gi|325289604|ref|YP_004265785.1| cell wall binding repeat 2-containing protein [Syntrophobotulus
glycolicus DSM 8271]
gi|324965005|gb|ADY55784.1| cell wall binding repeat 2-containing protein [Syntrophobotulus
glycolicus DSM 8271]
Length = 4339
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L L + +N L S +P +I + +LT LNLS N LT LP + LT L L N+ +
Sbjct: 2717 LTNLQMDYNNLTS--IPDYIGQIETLTTLNLSSNSLTELPDLSGLTLLTGLTLTTNRFTD 2774
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + LT L LNL N IS V +++ L L LDLS LT+ P ++ L +L +
Sbjct: 2775 IPST-VAQLTSLKNLNLGKNPISLVQTDLNGLQALTSLDLSGCGLTEFPGDIPKLANLTT 2833
Query: 124 LFLGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
L+L N + + + SK I +R D
Sbjct: 2834 LYLQNNKLTALEGSMTGLSKLATLRIDNNRFD 2865
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNK 60
++ KTL L +N+L LP + +L L+L+ NQ T +PV + LT L L N+
Sbjct: 1082 VTRTKTLSLDNNQLAD--LPDLSGLTALDSLSLNNNQFTEIPVTLNEIPTLTVLYLNDNR 1139
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAI---LDLSDNELTDVPCELSS 117
+ + N LT L L L N+I++ + V L L L N L +P +LS
Sbjct: 1140 LTAL-NGRLDKLTALKTLYLDGNRITDFTDLVSSNSGLGSLSALHLQKNGLAALPGDLSR 1198
Query: 118 LFHLKSLFLGGN 129
L L +L++GGN
Sbjct: 1199 LSSLTALYIGGN 1210
Score = 44.7 bits (104), Expect = 0.040, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT L L+L NN+ +E+ + ++ L +L L+DN LT + L L LK+L+L GN I
Sbjct: 1104 LTALDSLSLNNNQFTEIPVTLNEIPTLTVLYLNDNRLTALNGRLDKLTALKTLYLDGNRI 1163
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKN-- 82
D++ LT L+LS ++T + + NL +L L N I +LTK+ LNL N
Sbjct: 750 DLQGLTTLDLSDREITDISALANATNLENLNLSGNPIIESTYSALGSLTKVKELNLSNCM 809
Query: 83 NK------ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
N+ S + + + + L ILD+S N L ++L LKSL + N I ++
Sbjct: 810 NRGMRGLMPSGLLTALKKMSALEILDISQNNLMRGISSGNTLGSLKSLDISDNAIYALK 868
Score = 37.7 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 2 LSHLKTLDLSHNKLV--SDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
L+ LKTL L N++ +D + + SL+ L+L N L LP + +LT L +G
Sbjct: 1150 LTALKTLYLDGNRITDFTDLVSSNSGLGSLSALHLQKNGLAALPGDLSRLSSLTALYIGG 1209
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAIL----------------- 101
N + F TL+ L L+ K++E+ + + L NL +
Sbjct: 1210 NLFTEIPAGVF-TLSALETLDFSTCKVTELPAGLASLNNLKAIHADYNAISVIDTALSGM 1268
Query: 102 ------DLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
DL+ N LT +P + S+ L L L N +KT+ ++
Sbjct: 1269 TSLLSIDLTANGLTVIPDNVLSIKSLTGLSLDSNSLKTIPGNL 1311
>gi|47223177|emb|CAG11312.1| unnamed protein product [Tetraodon nigroviridis]
Length = 337
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 10 LSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
L HN+L SD + +F +R+L L L +NQLT +P K+L+ L L NKI+ +
Sbjct: 97 LFHNQLESDKIGKNVFSKLRNLDRLLLEHNQLTCVPPNLP-KSLSDLRLAHNKISKIPPG 155
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
F +T L+ L L+ N I +V+ L +L ILD+ N+L +P L L+ L+L
Sbjct: 156 LFQRMTNLTSLQLQANVIEDVAGAFSGLKSLTILDMRRNKLKKIPNGLPE--RLQQLYLE 213
Query: 128 GNPIKTV 134
N I++V
Sbjct: 214 FNDIESV 220
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+++L +L L N ++ D F ++SLT L++ N+L +P + L L L FN I
Sbjct: 160 MTNLTSLQLQAN-VIEDVAGAFSGLKSLTILDMRRNKLKKIPNGLP-ERLQQLYLEFNDI 217
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISE--VSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL + L +NK+++ + ++V ++ L LDLS N+L +P L
Sbjct: 218 ESVPAHFLTVLPKLQFVRLAHNKLTDKGLPADVFNISTLIELDLSFNKLKKIP-----LV 272
Query: 120 H--LKSLFLGGNPIK 132
H L++L+L N IK
Sbjct: 273 HRNLENLYLQANRIK 287
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
+L L+ + L+HNKL LP ++ +L EL+LS+N+L +P+ +NL +L L N
Sbjct: 227 VLPKLQFVRLAHNKLTDKGLPADVFNISTLIELDLSFNKLKKIPLVH--RNLENLYLQAN 284
Query: 60 KINNMENDYF------LTLTKLSLLNLKNNKIS 86
+I + F +++ +L L NKI+
Sbjct: 285 RIKDFSLSSFCRPIDMTNFSRMRMLRLDGNKIN 317
>gi|421090680|ref|ZP_15551471.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000562|gb|EKO51191.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 220
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++ L+LS KL S LP +++++L L+LS NQL +LP KNL L L NK+
Sbjct: 50 VRVLNLSGQKLTS--LPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLT 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ + L L +L N+++ + +G L NL L+LS+N LT VP E+ L +L+
Sbjct: 108 TLPKEIG-QLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLQNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L L GN + T+ ++I Q
Sbjct: 167 KLDLKGNRLTTLSDEIGQ 184
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDLS N+LV LP I +++L L+L N+LT LP +NL L N
Sbjct: 70 LQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPEN 127
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL N+++ V +G L NL LDL N LT + E+ L
Sbjct: 128 RLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIGQLK 186
Query: 120 HLKSLFLGGN 129
+L+ L L N
Sbjct: 187 NLQKLDLIDN 196
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L++LDL NKL + LP I +++L L N+L +LP +NL +L L N
Sbjct: 93 LKNLQSLDLYKNKLTT--LPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSEN 150
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L L+LK N+++ +S +G L NL LDL DN+L+
Sbjct: 151 RLTTVPKEIG-QLQNLQKLDLKGNRLTTLSDEIGQLKNLQKLDLIDNQLS 199
>gi|260804004|ref|XP_002596879.1| hypothetical protein BRAFLDRAFT_156516 [Branchiostoma floridae]
gi|229282139|gb|EEN52891.1| hypothetical protein BRAFLDRAFT_156516 [Branchiostoma floridae]
Length = 314
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L L+TLDL N++ + +F ++ ++ +L+ +YNQ+T + + T + L L + N
Sbjct: 19 LRKLRTLDLGSNQISNIDSDMFSNIPTMRKLDFNYNQVTCIQLGTFSNLPQLYKLDIAHN 78
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSS 117
+I N+ F +L +L L+L+ N I+ +S DL L LDLS N +T++ P S+
Sbjct: 79 QITNISPGAFSSLPQLQRLDLRFNHITNISPGAFSDLHQLLRLDLSSNHITEIQPGTFSN 138
Query: 118 LFHLKSLFLGGNPIKTVRNDILQD 141
L L++L L N + T++ Q+
Sbjct: 139 LPSLQTLSLRCNQMTTIQPGTFQN 162
>gi|241156124|ref|XP_002407702.1| leucine-rich transmembrane protein, putative [Ixodes scapularis]
gi|215494194|gb|EEC03835.1| leucine-rich transmembrane protein, putative [Ixodes scapularis]
Length = 426
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML-PVCTD-CKNLTHLLLGF 58
M + L L LSHN+L S +F + L L+LSYN+L+ L P D +NL L L
Sbjct: 81 MFTQLNRLSLSHNRLTSLDEHVFRGLGQLQSLDLSYNRLSSLYPKDFDYLENLNELNLAH 140
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPCE-LS 116
N + + F LT L+ LN+++ I+ +++ L NL LD+S N +VP + L
Sbjct: 141 NPLLEFNGNAFSKLTSLNKLNIQSTGITSFRTTDFDSLTNLKWLDISGNGFQNVPLKGLH 200
Query: 117 SLFHLKSLFLGGNPIKTV 134
L L L L NPI+T+
Sbjct: 201 KLSQLSYLDLSRNPIRTI 218
>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
JET]
gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
JET]
Length = 444
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L +L+ L L +N+L + LP I+ +++L EL LS N+LT LP + + L L L N
Sbjct: 308 LQNLRDLYLENNQLTT--LPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKN 365
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL L L +N++ + +G+L +L L+L N LT P E+ L
Sbjct: 366 KLTTLPKEIG-KLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQ 424
Query: 120 HLKSLFLGGNPI 131
L+ L+LGGNP
Sbjct: 425 KLQQLYLGGNPF 436
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I+ ++ L EL+L N+L LP +NL L LG N
Sbjct: 147 LQNLQELNLGFNQLTA--LPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVN 204
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + L KL L L +N+++ + + L NL L L N+LT + E+ L
Sbjct: 205 QLTALPKG-IEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQ 263
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+L+ L+LGGN + T+ +I + K H++ S+L
Sbjct: 264 NLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQL 298
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
L L+TL L ++L + LP I+ +++L +L L NQLT LP + +NL L L N
Sbjct: 285 LQKLQTLHLEGSQLTT--LPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSN 342
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L KL L+L NK++ + +G L L L L N+L +P E+ +L
Sbjct: 343 KLTTLPEE-IEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQ 401
Query: 120 HLKSLFLGGNPIKTVRNDI 138
L+SL L GN + + +I
Sbjct: 402 SLESLNLRGNSLTSFPEEI 420
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-----------VCTDCKN 50
L +L+ L L N+L + S + +++L +L L NQLT LP + +
Sbjct: 239 LQNLRDLYLEGNQLTTLSKEIG-KLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQ 297
Query: 51 LTHLLLGFNKINNM-----ENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINL 98
LT L G K+ N+ EN+ TL K L L L +NK++ + + L L
Sbjct: 298 LTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKL 357
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
LDLS N+LT +P E+ L L+ L+L N +KT+ +I
Sbjct: 358 QRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEI 397
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ LDLS N+L++ LP I ++ L +LNL+ N+L LP +
Sbjct: 78 LQNLRDLDLSSNQLMT--LPKEIGKLQKLQKLNLTRNRLANLP---------------EE 120
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L L+L+NN+++ + +G L NL L+L N+LT +P + L
Sbjct: 121 IGKLQN--------LQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQK 172
Query: 121 LKSLFLGGNPIKTVRNDI 138
L+ L L N + + +I
Sbjct: 173 LQELHLYSNRLANLPEEI 190
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L KL LNL N+++ + +G L NL L L +N+LT +P E+ L +L+ L LG N +
Sbjct: 101 LQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQL 160
Query: 132 KTVRNDILQDSKRIISHIKTSRL 154
+ I + K H+ ++RL
Sbjct: 161 TALPKGIEKLQKLQELHLYSNRL 183
>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
1051]
Length = 305
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ +L++N+L + LP I +++L L+L NQLT LP KNL L L N
Sbjct: 112 LKNLQVFELNNNQLTT--LPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDN 169
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
K+ + + L L +LNL N ++ + + +G L L L+L+ N+LT +P E+ L
Sbjct: 170 KLTTLPKETG-QLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L+ L+LG N +KT+ +I Q
Sbjct: 229 SLRELYLGDNQLKTLPKEIGQ 249
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L +N+ + LP I ++SL EL L NQLT LP KNL L N
Sbjct: 66 LKNLQTLNLWNNQFTT--LPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNN 123
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L NN+++ + VG L NL L L DN+LT +P E L
Sbjct: 124 QLTTLPAEIG-KLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLK 182
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + + N+I Q K
Sbjct: 183 NLRMLNLSKNLLTILPNEIGQLKK 206
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
L +L+ LDL +N+L + LP + +++L +L+L N+LT LP T KNL L L N
Sbjct: 135 LKNLQHLDLWNNQLTT--LPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKN 192
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + N+ L KL LNL N+++ + +G L +L L L DN+L +P E+ L
Sbjct: 193 LLTILPNEIG-QLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLK 251
Query: 120 HLKSLFLGGNPIKTVRNDILQDSK 143
+L+ L L N + TV +I Q K
Sbjct: 252 NLRELLLRHNQLTTVPKEIGQLKK 275
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L L NKL + LP +++L LNLS N LT+LP K L L L +N
Sbjct: 158 LKNLYDLSLHDNKLTT--LPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYN 215
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L L +N++ + +G L NL L L N+LT VP E+ L
Sbjct: 216 QLTTLPKEIG-QLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQLTTVPKEIGQLK 274
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
L+ L L NPI + ++ KRI I D+
Sbjct: 275 KLRWLLLDANPI------LPKELKRIQKFIPKCDTDF 305
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 77 LLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
+LNL K++ + +G L NL L+L +N+ T +P E+ L L+ L+LG N + T+
Sbjct: 48 VLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPK 107
Query: 137 DILQ 140
++ Q
Sbjct: 108 EVGQ 111
>gi|348535760|ref|XP_003455366.1| PREDICTED: leucine-rich repeat-containing protein 47-like
[Oreochromis niloticus]
Length = 559
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFN 59
L LK LDLS N L LP + +R L LN+S N L +LP + C L+ + + N
Sbjct: 92 LKSLKVLDLSVNNLTV--LPEGVTQLRELNTLNVSCNSLEVLPEGLSQCTKLSSINISKN 149
Query: 60 KINNMENDYFLT-LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
++ D++ L LS + +N I E+S + L L +LDLS+N+L ++P +LS
Sbjct: 150 RVTGFPADFYSEKLDLLSTVVASDNLIEELSGEIHKLAALKVLDLSNNKLREIPSDLSDC 209
Query: 119 FHLKSLFLGGNPIKTVR 135
LK + GN + R
Sbjct: 210 PKLKEISFKGNKLNDKR 226
>gi|291400150|ref|XP_002716435.1| PREDICTED: leucine-rich repeats and IQ motif containing 4
[Oryctolagus cuniculus]
Length = 561
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 9 DLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGFNKINNME-- 65
DLS+N +++ SLP+ + +L EL L + L +P+ CKNL HL LLG N++E
Sbjct: 101 DLSYNPILASSLPVISCLHTLRELRLYHINLGEIPIVI-CKNLHHLELLGLTG-NHLECL 158
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
+ TKL + LK N+ + L NL I+DL +N+L+ +P E+ +L L F
Sbjct: 159 PKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKLSAIPEEIGNLTSLHKFF 218
Query: 126 LGGNPIKTVRNDILQDSK 143
+ N + V + + Q K
Sbjct: 219 VAYNNLPFVPDSLGQCEK 236
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL-LGFNKIN 62
+ LD+SHN L SLP + + +TE+ LS N L +P HLL L +
Sbjct: 237 MSVLDVSHNLL--QSLPHTLSQLTEMTEIGLSGNHLEKVPRLLCRWTSLHLLYLQDTGLR 294
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ F L L L+L N + + L NL +L L DN++ +P LS L LK
Sbjct: 295 GLRRS-FKRLVNLHFLDLSQNHLDHCPLQICMLKNLEVLALDDNKIGQLPSALSFLSKLK 353
Query: 123 SLFLGGNPIKTVRNDIL-----------QDSKRIISHIKTS 152
L L GN ++ QD ++H+ S
Sbjct: 354 ILGLTGNKFSVFPEEVFALASLEKLYIGQDRGSKLTHVPES 394
>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 598
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+LSDN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQKLYLRNNRLTVFPKEIGQ 253
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRL 154
L++L L N + T+ +I LQ+ +++ +++ +RL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQKL--YLRNNRL 244
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L+ LDLS N+ + P I + +L LNL NQLT L +NL L L N
Sbjct: 467 LKKLQKLDLSVNQFTT--FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 525 QFTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L L LNLK N ++ + +G L NL LDL DN+L P + L L+SL L N +
Sbjct: 70 LKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 129
Query: 132 KTVRNDI 138
+ N+I
Sbjct: 130 IILPNEI 136
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+LS N+L + LP+ I +++L +L L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLSDNQLAT--LPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
>gi|284010801|dbj|BAI66880.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 267
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L LDL N+L + + +F + +L +L L+ NQL LP V LT L LG N
Sbjct: 63 LKELTYLDLGGNQLQTLPVGVFDHLVNLDKLYLNKNQLQSLPNGVFDKLTKLTVLGLGPN 122
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSS 117
++ ++ N F LT+L++L+L NNK+ + + V D L L L L +N+L VP S
Sbjct: 123 QLQSLPNGVFDKLTQLTILHLYNNKLQSLPNGVFDKLTELKTLSLLNNQLRRVPDGAFDS 182
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
L L + L NP NDIL +K + ++++
Sbjct: 183 LSSLSDITLNDNPWDCSCNDILYLAKWLATNLE 215
>gi|224057327|ref|XP_002188144.1| PREDICTED: leucine-rich repeat-containing protein 39 [Taeniopygia
guttata]
Length = 335
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINN 63
L+ L+L+ N+ +SD P D++ L+ ++L NQ T +P + NL L +G NK+
Sbjct: 154 LERLELAVNRSISDLPPQLSDLKKLSHIDLCMNQFTAIPSALLNMPNLEWLDMGGNKLQE 213
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ + + L L L+ N+I+ + +G++ NL+ L LS+N+L D+P + + +L+
Sbjct: 214 LP-EAIDRMENLHTLWLQRNEINSLPETIGNMKNLSTLVLSNNKLKDIPACMKDMTNLRF 272
Query: 124 LFLGGNPIK 132
+ NP++
Sbjct: 273 VNFRDNPLE 281
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L LDLS N + +S+P I + SL EL LSYN++ +P ++C +L L L N+
Sbjct: 108 LVVLDLSRNSI--ESVPKEIGQLTSLQELLLSYNRIKSVPKEISNCISLERLELAVNRSI 165
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KLS ++L N+ + + S + ++ NL LD+ N+L ++P + + +L
Sbjct: 166 SDLPPQLSDLKKLSHIDLCMNQFTAIPSALLNMPNLEWLDMGGNKLQELPEAIDRMENLH 225
Query: 123 SLFLGGNPIKTVRNDI 138
+L+L N I ++ I
Sbjct: 226 TLWLQRNEINSLPETI 241
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L +P FI SL L+LS N + +P +L LLL +N
Sbjct: 82 LIHLQEWQLHRTSL--QKIPQFIGRFHSLVVLDLSRNSIESVPKEIGQLTSLQELLLSYN 139
Query: 60 KINNMENDYF--LTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
+I ++ + ++L +L L N IS++ + DL L+ +DL N+ T +P L +
Sbjct: 140 RIKSVPKEISNCISLERLEL--AVNRSISDLPPQLSDLKKLSHIDLCMNQFTAIPSALLN 197
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
+ +L+ L +GGN ++ + I
Sbjct: 198 MPNLEWLDMGGNKLQELPEAI 218
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 69 FLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGG 128
L L L L + ++ +G +L +LDLS N + VP E+ L L+ L L
Sbjct: 79 LLKLIHLQEWQLHRTSLQKIPQFIGRFHSLVVLDLSRNSIESVPKEIGQLTSLQELLLSY 138
Query: 129 NPIKTVRNDI 138
N IK+V +I
Sbjct: 139 NRIKSVPKEI 148
>gi|260792985|ref|XP_002591494.1| hypothetical protein BRAFLDRAFT_139047 [Branchiostoma floridae]
gi|229276700|gb|EEN47505.1| hypothetical protein BRAFLDRAFT_139047 [Branchiostoma floridae]
Length = 184
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ L +SHN + F ++ L E++LS+NQ+T L T L +LLL NKI
Sbjct: 45 LRRLRRLIMSHNNITRIEPGAFAELPQLWEIDLSFNQITTLQAGTFADPLQNLLLNSNKI 104
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEV-SSNVGDLINLAILDLSDNELTDVPC-ELSSLF 119
+ + F L L L+L +N+I+ + SS DL L +L+L N++T + + L
Sbjct: 105 SKINPGLFAALPLLETLDLSSNQITMIQSSTFADLSQLYLLNLISNQITMIRTGTFADLP 164
Query: 120 HLKSLFLGGNPIKTVR 135
L++L+L N I ++
Sbjct: 165 SLRNLYLESNKITEIQ 180
>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
Length = 1126
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LSHL+ L LS N + ++ +LT+LNLS NQL +LP + NLT L L N+
Sbjct: 812 LSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQ 871
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + LT L+LL+L N+++E+ +G+L NL +L LS N+LT +P E+ +L +
Sbjct: 872 LKVLPKE-IGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTN 930
Query: 121 LKSLFLGGN 129
L L L N
Sbjct: 931 LTELDLSEN 939
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L++L+ L LS N+L + LP I ++ +LTEL+LS N+ + + NL L L +
Sbjct: 905 LTNLEVLYLSRNQLTA--LPKEIGNLTNLTELDLSENENVLPAEIGNLTNLRRLYLNRKQ 962
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + LT L L+LK+N++ + +G L L LD++ N+L +P E+ +L +
Sbjct: 963 LTVLVPE-IGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTN 1021
Query: 121 LKSLFLGGNPIKTVRNDI 138
L L+L N + + +I
Sbjct: 1022 LTELYLYDNQLTALPKEI 1039
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 23/100 (23%)
Query: 30 TELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
T LNL+ QLT LP +I N LT L+ L L N+++ +
Sbjct: 747 TSLNLAGKQLTELP---------------KEIGN--------LTDLTWLYLNRNQLATLP 783
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
+G+LINL +L L +N LT +P E+ +L HL+ L+L GN
Sbjct: 784 PEIGNLINLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGN 823
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L++LKTL L N+L++ LP I + L L+++ NQL LP + NLT L L N
Sbjct: 973 LTNLKTLSLKDNQLIA--LPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDN 1030
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT L+ L+L NK+ + +G L NL L L N+LT +P E+ +L
Sbjct: 1031 QLTALPKE-IGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNLT 1089
Query: 120 HLKSLFLGGNPIKTVRNDIL-QDSKRIISHIK 150
+L L N + + +I+ Q ++ I+++++
Sbjct: 1090 NLTQLSFYNNQLISPSPEIVKQGTQAILAYLR 1121
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L++L LDLS N+ V LP I ++ +L L L+ QLT+L P + NL L L N
Sbjct: 928 LTNLTELDLSENENV---LPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDN 984
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + LT+L L++ N++ ++ +G+L NL L L DN+LT +P E+ +L
Sbjct: 985 QLIALPPE-IGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLT 1043
Query: 120 HLKSLFLGGNPI 131
+L L L N +
Sbjct: 1044 NLTKLHLYKNKL 1055
>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
Length = 632
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 37/216 (17%)
Query: 28 SLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNME---------------NDYFLTL 72
S+ ++LS N LT +P+ +N+ HL L FNKI N++ + TL
Sbjct: 371 SVQYIDLSRNLLTSVPII---ENIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTL 427
Query: 73 TK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLF 125
K L+ +NL NNK+ E+ S G+L+NL L LS+NEL ++P L S+ L+ L
Sbjct: 428 PKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLS 487
Query: 126 LGGNPIKTVRNDI--LQDSKRI-ISHIKTSRLDYHCQN---VDGGGMSSQESTSEI-NID 178
L N + + +I ++ K++ +S+ ++L++ + DG + + E + NI
Sbjct: 488 LDNNRLTIIPKEIGTIEKLKKVDLSNNYLTKLEFSDKANVLADGNFIENMEGQLRLENIS 547
Query: 179 KYKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEI 214
K+D L + + IN+ + + ++GM +E +E+
Sbjct: 548 NKKID----LKIGEEINLLDYIEVKGM-DRELPVEV 578
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 45/177 (25%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTD------------- 47
LS L ++LS+NKL + LP I + S+ ELNL N + + P ++
Sbjct: 302 LSKLTEINLSNNKL--ERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYISNNN 359
Query: 48 ----------------------------CKNLTHLLLGFNKINNMENDYFLTLTKLSLLN 79
+N+ HL L FNKI N++ + ++ +S L
Sbjct: 360 IINFEIDFLPTSVQYIDLSRNLLTSVPIIENIKHLDLSFNKIENIQ-EGIKSMNSISYLG 418
Query: 80 LKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRN 136
L N I + +GD+I L ++LS+N+L ++P E +L +L+ L+L N + + N
Sbjct: 419 LNGNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPN 475
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
+ L+ LD+S N L S LP I ++ +L L++S N++ +P + K L LL N
Sbjct: 164 MKKLRWLDVSKNSLTS--LPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYEN 221
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ +D + L L LNL NN I+E+ N+G L L + +N+LT +P + L
Sbjct: 222 ELTTFPSD-IVGLPVLRELNLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELE 280
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
L +L + N + + ++I+ SK ++ ++L+ N+ G ++ S E+N+D
Sbjct: 281 KLFTLSVNNNELINLPDNIINLSKLTEINLSNNKLERLPDNI--GRLT---SVKELNLD 334
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 26 MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
+ +L E+NL N + +P ++L L+L N++N + Y + KL L++ N
Sbjct: 118 LPNLLEMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPT-YIGAMKKLRWLDVSKNS 176
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
++ + +G++I L LD+S N++ ++P E+++L L L N + T +DI+
Sbjct: 177 LTSLPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIV 231
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 23 FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLK 81
+ + L ELNL N +T LP L +L +G NK+ ++ + L KL L++
Sbjct: 230 IVGLPVLRELNLFNNMITELPDNIGSFPELMYLRIGENKLTSLP-ESIGELEKLFTLSVN 288
Query: 82 NNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIK 132
NN++ + N+ +L L ++LS+N+L +P + L +K L L N IK
Sbjct: 289 NNELINLPDNIINLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIK 339
>gi|357164161|ref|XP_003579968.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
distachyon]
Length = 505
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 29/166 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLP--VCTDCKNLTHLLLG 57
+LS+LK L++S NKL +LP I RSL EL+ SYN LT LP + + NL L +
Sbjct: 264 LLSNLKILNVSSNKL--RTLPDSISKCRSLVELDASYNGLTYLPTNIGYELVNLRKLWVH 321
Query: 58 FNKINN-------MENDYFL---------------TLTKLSLLNLKNN--KISEVSSNVG 93
NK+ + M++ Y L L+ L +LNL +N + E+ + G
Sbjct: 322 MNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDMKELPFSFG 381
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
DL+ L LDLS+N++ +P L L+ L L NP+ +DI+
Sbjct: 382 DLLKLRELDLSNNQIHALPDSFGRLDRLEKLNLEQNPLAMPPSDIV 427
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ L L+ N LVS LP + + S L LN+S N+L LP + C++L L +N
Sbjct: 242 LDHLEELLLASNALVS--LPDSVGLLSNLKILNVSSNKLRTLPDSISKCRSLVELDASYN 299
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + + L L L + NK+ S++ ++ +L +LD NEL +P + L
Sbjct: 300 GLTYLPTNIGYELVNLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLS 359
Query: 120 HLKSLFLGGN 129
L+ L L N
Sbjct: 360 SLEILNLSSN 369
>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
anatinus]
Length = 537
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ +E D L+KL +L+++ NKI ++ + +G+L NL LD++ N+L +P E+ +
Sbjct: 203 RMTTVEKD-IKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 262 QITNLDLQHN 271
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 336 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLK 393
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 394 KLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 452
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 453 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 512
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 513 PQIVAGGPS 521
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 34/175 (19%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP------------------ 43
+ + LDL HN+L+ LP I ++ SL L L YN+L+ +P
Sbjct: 261 TQITNLDLQHNELLD--LPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNN 318
Query: 44 ----------VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVG 93
+ + K L+ L + N++ ++ D F T T + LNL N+++++ +V
Sbjct: 319 ISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIPEDVS 377
Query: 94 DLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRII 146
L++L +L LS+N L +P L +L L+ L L N ++++ N+I L+D ++++
Sbjct: 378 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 432
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
+F + L++LN+ NQLT LP+ ++ L L N++ + D L L +L L
Sbjct: 329 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVS-GLVSLEVLIL 387
Query: 81 KNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
NN + ++ +G+L L LDL +N+L +P E++ L L+ L L N + T+ I
Sbjct: 388 SNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 445
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
++ LTEL L N+L LP C NL L L N + ++ D L KL +L+L++N
Sbjct: 121 ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHN 179
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
K+ E+ S V L +L L L N +T V ++ +L L L + N IK + +I
Sbjct: 180 KLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLPAEI 234
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 32 LNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSS 90
L+LS + MLP + LT L L NK+ ++ + L L L L N ++ +
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVG-CLVNLMTLALSENSLTSLPD 163
Query: 91 NVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIK 150
++ +L L +LDL N+L ++P + L L +L+L N + TV DI SK I+ I+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIR 223
Query: 151 TSRL 154
+++
Sbjct: 224 ENKI 227
>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 595
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ +++ +G L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFLKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++ L+LS KL + LP I +++L ELNL +N LT+LP +NL L L N++
Sbjct: 50 VRVLNLSGEKLTA--LPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLA 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L+L N++ + + +G L NL L L N+LT P E+ L +L+
Sbjct: 108 TFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L+L N + + +I Q
Sbjct: 167 KLWLSENRLTALPKEIGQ 184
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLT-MLPVCTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T L +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLTAEIG-QLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFLKEI 487
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L L+ LDLS N+ + L + +L LNL NQLT L +NL L L N+
Sbjct: 467 LKKLQKLDLSVNQFTT-FLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQ 525
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
+ + L KL L+L+NN+++ + + +G L NL L L +N+L+
Sbjct: 526 FTVLPKEIG-KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L LNL NN+++ +G L NL L+L N P L
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN-----PFSLKERK 319
Query: 120 HLKSLFLGGN 129
++ LF N
Sbjct: 320 RIQKLFPDSN 329
>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 447
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 32/180 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV---------------- 44
L L+ L L+HNKL + LP I +++L ELNL+ QL+ LP
Sbjct: 119 LQRLQILHLAHNKLTT--LPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLN 176
Query: 45 --------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+NL L L N++ N+ + + L KL LNL +N++ + +G L
Sbjct: 177 ERTTLPKEIGQLQNLQILYLRANQLTNLPKE-IIHLQKLQELNLNHNQLITLPKEIGKLR 235
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRIISHIKTSRL 154
NL IL+L DN+L +P E+ L +L+ L LG N + T+ I LQ+ K + H++ ++L
Sbjct: 236 NLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKEL--HLEINQL 293
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP----------VCTDCKN- 50
L +L+ L+L N+L + + + D+++L EL+L NQLT LP + C N
Sbjct: 257 LENLQKLNLGRNQLTTLTKGIG-DLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCNNE 315
Query: 51 LTHLLLGFNKINNMEN-----DYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINL 98
LT L G ++ N++ + TL K L +L+L NN+++ + +G L NL
Sbjct: 316 LTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNL 375
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSK 143
+LDL N+LT +P E+ L +L+ L L N + + DI Q K
Sbjct: 376 KVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKK 420
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
+ ++ LDL +N LP I +++L ELNL+YN+LT LP +NL L L N+
Sbjct: 49 NEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQ 108
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L +L +L+L +NK++ + +G L NL L+L+ +L+ +P E+ L
Sbjct: 109 LTTLPKEIG-QLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQK 167
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
L+ L L N T+ +I Q I +++ ++L
Sbjct: 168 LQVLSLDLNERTTLPKEIGQLQNLQILYLRANQL 201
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 15/139 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L +LK L+L +N+L + S + +++L +L+L +NQLT LP + L +L K+
Sbjct: 303 LQNLKILNLCNNELTTLSNGIG-RLQNLQKLDLRFNQLTTLP--KEIGKLQNL-----KV 354
Query: 62 NNMENDYFLTLTK-------LSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCE 114
++ N+ TL K L +L+L N+++ + +G L NL L+L+ N+LT +P +
Sbjct: 355 LDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKD 414
Query: 115 LSSLFHLKSLFLGGNPIKT 133
+ L L +L L NPI +
Sbjct: 415 IEQLKKLNTLSLRNNPIAS 433
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+ L L N+L + LP I ++ L ELNL++NQL LP +
Sbjct: 188 LQNLQILYLRANQLTN--LPKEIIHLQKLQELNLNHNQLITLP---------------KE 230
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I + N L +LNL++N++ + + L NL L+L N+LT + + L +
Sbjct: 231 IGKLRN--------LKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQN 282
Query: 121 LKSLFLGGNPIKTVRNDI 138
LK L L N + T+ +I
Sbjct: 283 LKELHLEINQLTTLPKEI 300
>gi|284010725|dbj|BAI66842.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 237
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K LDL NKL S F ++ LT L+L YN+L L V L L LG N++ +
Sbjct: 43 KKLDLQSNKLSSLPHTAFHNLNKLTFLDLGYNELPTLSAGVFDQLVELDWLQLGGNQLES 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVP-CELSSLFHL 121
+ F LTKL++L L +NK+ + V D L L L+L+ N+L VP SL L
Sbjct: 103 LPQGIFDHLTKLTILWLNDNKLQRLPEGVFDKLTELKTLNLNSNKLPRVPEGVFDSLSSL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRI 145
L+L NP NDIL SK I
Sbjct: 163 NILYLNDNPWDCSCNDILYLSKWI 186
>gi|284010699|dbj|BAI66829.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 347
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 10/203 (4%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K LDL +NKL S F ++SLT L+LSYN L LP + + KNL L + NK+ +
Sbjct: 43 KKLDLKYNKLSSLPNMAFHGLQSLTYLSLSYNDLKTLPAGIFKELKNLETLWVTDNKLQS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SSLFHL 121
+ + F LT+L+LL L N++ + V + L L L L N+L +P + L L
Sbjct: 103 LPSGIFDKLTQLTLLRLHYNQLQSLPDGVFEKLTQLKELYLHQNKLQSLPNGVFDKLTQL 162
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQNVDGGGMSSQESTSEINIDKY 180
K L+LG N ++++ + I ++ + RL D Q++ G E+++
Sbjct: 163 KELWLGINQLQSLPSGIFDK----LTKLTDLRLNDNELQSLPHGVFDKLTELKELSLQYN 218
Query: 181 KLDRTKTLTLCKVINIPESVYMR 203
+L+R K+ + E++Y+R
Sbjct: 219 QLERLPNGLFDKLTQL-ETLYLR 240
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+TL ++ NKL S +F + LT L L YNQL LP V L L L N
Sbjct: 87 LKNLETLWVTDNKLQSLPSGIFDKLTQLTLLRLHYNQLQSLPDGVFEKLTQLKELYLHQN 146
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCEL-SS 117
K+ ++ N F LT+L L L N++ + S + D L L L L+DNEL +P +
Sbjct: 147 KLQSLPNGVFDKLTQLKELWLGINQLQSLPSGIFDKLTKLTDLRLNDNELQSLPHGVFDK 206
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL-DYHCQNVDGGGMSSQESTSEIN 176
L LK L L N ++ + N + ++ ++T L D + V G S S S +
Sbjct: 207 LTELKELSLQYNQLERLPNGLFDK----LTQLETLYLRDNQLRRVPEGAFDSLSSISNVQ 262
Query: 177 IDKYKLDRT 185
+ D T
Sbjct: 263 LTNNPWDCT 271
>gi|284010651|dbj|BAI66805.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 249
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMEND 67
L++NKL F ++ LT L+L N+L LP V NL L LG N++ ++
Sbjct: 47 LNYNKLRELEPTAFHGLKELTYLDLDGNKLQTLPTGVFDHLVNLNELRLGTNQLTSLPPG 106
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHLKSLF 125
F LTKL+ L+L N++ + V D L L L ++ N+L VP SL ++K+L+
Sbjct: 107 IFDKLTKLTRLDLDRNQLQSLPKGVFDKLTQLKTLQMTSNQLRSVPNRAFDSLSNIKTLW 166
Query: 126 LGGNPIKTVRNDILQDSKRI 145
L NP NDIL SK I
Sbjct: 167 LQSNPWDCSCNDILYLSKWI 186
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 32 LNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
++ S LT +P + TD +NL +L +NK+ +E F L +L+ L+L NK+ +
Sbjct: 24 VDCSGKMLTAIPSNIPTDTENL---VLNYNKLRELEPTAFHGLKELTYLDLDGNKLQTLP 80
Query: 90 SNVGD-LINLAILDLSDNELTDVP 112
+ V D L+NL L L N+LT +P
Sbjct: 81 TGVFDHLVNLNELRLGTNQLTSLP 104
>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 595
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L L++LDLS N+L+ LP I +++L +L L N+LT P +NL L L N
Sbjct: 116 LQKLESLDLSENRLII--LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSEN 173
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L L+L++N+ + + +G L NL L+L DN+L +P E+ L
Sbjct: 174 RLTALPKEIG-QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+L+ L+L N + +I Q
Sbjct: 233 NLQELYLRNNRLTVFPKEIGQ 253
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L +L+ LDL N+L + + ++++ L L+LS N+L +LP +NL L L NK
Sbjct: 93 LENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNK 151
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + L L L L N+++ + +G L NL LDL DN+ T +P E+ L +
Sbjct: 152 LTTFPKEIG-QLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQN 210
Query: 121 LKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 211 LQTLNLQDNQLATLPVEIGQ 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L+L N+L + LP I +R+L +L+L N L + P K L L L N
Sbjct: 421 LKNLEALNLEANEL--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ + L L LNL+ N+++ + + + L NL LDL+DN+ T +P E+ L
Sbjct: 479 QFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK 537
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L++L L N + T+ +I Q
Sbjct: 538 KLQTLDLRNNQLTTLPTEIGQ 558
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
++ L+LS KL LP I +++L ELNL +N LT+LP +NL L L N++
Sbjct: 50 VRVLNLSGEKLTV--LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L KL L+L N++ + + +G L NL L L N+LT P E+ L +L+
Sbjct: 108 TFP-AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166
Query: 123 SLFLGGNPIKTVRNDILQ 140
L+L N + + +I Q
Sbjct: 167 KLWLSENRLTALPKEIGQ 184
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ L L N L P I+ ++ L +L+LS NQ T P +NL L L N
Sbjct: 444 LRNLQKLSLHQNTL--KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN 501
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ N+ + L L L+L +N+ + + +G L L LDL +N+LT +P E+ L
Sbjct: 502 QLTNLPAE-IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ 560
Query: 120 HLKSLFLGGN 129
+L+ L+L N
Sbjct: 561 NLQWLYLQNN 570
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 5 LKTLDLS-HNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
LK +LS K S S P + + R+L LNL + LP + KNL +L LG N +
Sbjct: 352 LKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGL 411
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
N+ ++ L L LNL+ N++ + +G L NL L L N L P E+ L L
Sbjct: 412 KNIPSEIG-QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKL 470
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N T +I
Sbjct: 471 QKLDLSVNQFTTFPKEI 487
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+TL+L N+L + LP+ I +++L EL L N+LT+ P +NL L N
Sbjct: 208 LQNLQTLNLQDNQLAT--LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELT 109
++ + + L L LNL NN+++ +G L NL L+L N L+
Sbjct: 266 RLTALPKEMG-QLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
>gi|50540322|ref|NP_001002627.1| leucine-rich repeat-containing protein 57 [Danio rerio]
gi|82235961|sp|Q6DHL5.1|LRC57_DANRE RecName: Full=Leucine-rich repeat-containing protein 57
gi|49903828|gb|AAH75955.1| Leucine rich repeat containing 57 [Danio rerio]
Length = 238
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+ ++L+T+DLS+NK+ + LP FI + L +S N+LT LP K L L+L
Sbjct: 36 LTANLRTVDLSNNKI--EELPAFIGSFQHLKSFTISCNKLTSLPNDIGKLKKLETLILNG 93
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + + L L L+L N+ E S +G L L +LDLS N++ VP E++ L
Sbjct: 94 NQLKQLPSSIG-QLKSLRTLSLSGNQFKEFPSGLGTLRQLDVLDLSKNQIRVVPAEVAEL 152
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
++ + L N I +V ++ + + +K RL+ +C
Sbjct: 153 QAIE-INLNQNQISSVTQEVSRTPR-----LKVLRLEENC 186
>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 473
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 26/138 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L+TL+L+ N+ + LP I +++ L +L+LS+NQLT LP +
Sbjct: 164 LQNLQTLNLNSNQFTT--LPEEIGNLQKLQKLDLSHNQLTTLP---------------KE 206
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
I ++N L LNL +N+++ +S +G+L NL LDL N+LT +P E+ +L +
Sbjct: 207 IGQLQN--------LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQN 258
Query: 121 LKSLFLGGNPIKTVRNDI 138
L++L L GN + + +I
Sbjct: 259 LQTLDLEGNQLAALPEEI 276
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 2 LSHLKTLDLSHNKLVS---------------------DSLPLFID-MRSLTELNLSYNQL 39
L +L+TLDL N+L + +LP I ++ L L+L +NQL
Sbjct: 302 LQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQL 361
Query: 40 TMLPV-CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINL 98
LP D +NL L LG N++ + + L L +L+L N+++ + +G L NL
Sbjct: 362 KTLPKEIEDLQNLKILSLGSNQLTTLPKEVG-KLQNLIMLDLHGNQLTTLPKEIGKLQNL 420
Query: 99 AILDLSDNELTDVPCELSSLFHLKSLFLGGNP 130
+LDL N+L +P E+ L +LK L L GNP
Sbjct: 421 KMLDLHGNQLMTLPKEIGKLQNLKELNLVGNP 452
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 30/171 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV---------------- 44
L +L+TLDL N+L + LP I ++++L L+L NQLT LP
Sbjct: 279 LQNLQTLDLEGNQLAT--LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNN 336
Query: 45 --------CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLI 96
+ L L L N++ + + L L +L+L +N+++ + VG L
Sbjct: 337 RLTTLPKEIGKLQKLQWLSLDHNQLKTLPKE-IEDLQNLKILSLGSNQLTTLPKEVGKLQ 395
Query: 97 NLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI--LQDSKRI 145
NL +LDL N+LT +P E+ L +LK L L GN + T+ +I LQ+ K +
Sbjct: 396 NLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKEL 446
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 26/139 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTML-PVCTDCKNLTHLLLGFN 59
L L+ LDLSHN+L + LP I +++L +LNL+ NQLT L + +NL L LG N
Sbjct: 187 LQKLQKLDLSHNQLTT--LPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRN 244
Query: 60 K-------INNMEN---------------DYFLTLTKLSLLNLKNNKISEVSSNVGDLIN 97
+ I N++N + L L L+L+ N+++ + +G+L N
Sbjct: 245 QLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQN 304
Query: 98 LAILDLSDNELTDVPCELS 116
L LDL N+LT +P E+
Sbjct: 305 LQTLDLEGNQLTTLPKEIG 323
>gi|384184560|ref|YP_005570456.1| internalin protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|410672850|ref|YP_006925221.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452196857|ref|YP_007476938.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|326938269|gb|AEA14165.1| internalin protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|409171979|gb|AFV16284.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452102250|gb|AGF99189.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 1012
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +KTLDL N + D PLF + ++ +L L+ NQ++ L N+ L +G NKI
Sbjct: 305 MKKIKTLDLIGNN-IKDIQPLFT-LSTMKQLYLANNQISDLTGIDRLNNVELLWIGNNKI 362
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
NN+E+ ++ L L + +++I ++SS + L NL +L+L +N ++DV LS+L +L
Sbjct: 363 NNVES--ISKMSNLIELEISDSEIKDISS-LSQLGNLQVLNLEENYISDV-SPLSTLTNL 418
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+ LG N I VR + + KRI I+ ++ + +VD
Sbjct: 419 HEINLGANEISDVR-PVEELGKRISIDIQRQKIFLNEASVD 458
>gi|228977246|ref|ZP_04137643.1| hypothetical protein bthur0002_4610 [Bacillus thuringiensis Bt407]
gi|228782465|gb|EEM30646.1| hypothetical protein bthur0002_4610 [Bacillus thuringiensis Bt407]
Length = 1026
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +KTLDL N + D PLF + ++ +L L+ NQ++ L N+ L +G NKI
Sbjct: 319 MKKIKTLDLIGNN-IKDIQPLFT-LSTMKQLYLANNQISDLTGIDRLNNVELLWIGNNKI 376
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
NN+E+ ++ L L + +++I ++SS + L NL +L+L +N ++DV LS+L +L
Sbjct: 377 NNVES--ISKMSNLIELEISDSEIKDISS-LSQLGNLQVLNLEENYISDV-SPLSTLTNL 432
Query: 122 KSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+ LG N I VR + + KRI I+ ++ + +VD
Sbjct: 433 HEINLGANEISDVR-PVEELGKRISIDIQRQKIFLNEASVD 472
>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
Length = 577
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 140 LVNLVKLALSENSLTS--LPDSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFN 197
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I +E D + L KL++L+++ NKI + + +G+L NL LD++ N+L +P E+ +
Sbjct: 198 RITAVEKDLKM-LPKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 256
Query: 120 HLKSLFLGGN 129
+ +L L N
Sbjct: 257 QITNLDLQHN 266
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKI 61
S + +L++ HN++ +F + L++LN+ NQLT LP+ ++ L L N++
Sbjct: 350 SSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL 409
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
+ D L + +L L NN + ++ +G+L L LDL +N+L +P E++ L L
Sbjct: 410 TKIPEDVS-GLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 468
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L N + T+ I
Sbjct: 469 QKLVLTNNQLTTLPRGI 485
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 29/189 (15%)
Query: 5 LKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPV------------------- 44
L L++ N+L S LPL F S+ ELNL+ NQLT +P
Sbjct: 376 LSKLNMKDNQLTS--LPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLK 433
Query: 45 -----CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
+ + L L L NK+ ++ N+ L L L L NN+++ + +G L NL
Sbjct: 434 KLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLT 492
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNP-IKTVRNDILQDSKRIISHIKTSRLDYHC 158
L L +N LT +P E+ +L +L+ L+L NP + ++ ++ SK I I+ L +
Sbjct: 493 HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLP 552
Query: 159 QNVDGGGMS 167
+ GG S
Sbjct: 553 PQIVAGGPS 561
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK--NLTHLLLGFNK 60
S L L+L +N + + L + + L L+ N PV + ++ L + N+
Sbjct: 302 SELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHNR 361
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
IN + F LS LN+K+N+++ + + G ++ L+L+ N+LT +P ++S L
Sbjct: 362 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVS 421
Query: 121 LKSLFLGGNPIKTVRNDI 138
++ L L N +K + + I
Sbjct: 422 IEVLILSNNLLKKLPHGI 439
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
LT+++ L L NK+ + + VG+L+NL L LS+N LT +P L +L L L L N +
Sbjct: 117 LTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKL 176
Query: 132 KTV 134
+ +
Sbjct: 177 REI 179
>gi|170043786|ref|XP_001849554.1| leucine-rich repeat-containing protein 4B [Culex quinquefasciatus]
gi|167867092|gb|EDS30475.1| leucine-rich repeat-containing protein 4B [Culex quinquefasciatus]
Length = 716
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 42/227 (18%)
Query: 5 LKTLDLSHNKL--VSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC--KNLTHLLLGFNK 60
L+ L + +NK+ + S+ + ++R L +LSYN L +P T K LT L L NK
Sbjct: 55 LQRLVIKNNKIKTIDSSMQFYAELRFL---DLSYNHLFNMPPRTFAYQKKLTELHLNHNK 111
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-------------------------GDL 95
+ ++ N FL L L++LNL+ N + E+S V L
Sbjct: 112 VGSISNKTFLGLDSLTILNLRGNFLDELSDGVFGGLKKLEELNLGQNRIGKIDAKAFEGL 171
Query: 96 INLAILDLSDNELTDVP-CELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRL 154
+NL +L L DN L+ VP L L L+LG N V D +S K SRL
Sbjct: 172 VNLKVLYLDDNTLSAVPSAAFGPLASLAELYLGINSFSGVPKDAF------LSLSKLSRL 225
Query: 155 DYHCQ---NVDGGGMSSQESTSEINIDKYKLDRTKTLTLCKVINIPE 198
D NV G + E +++ +L R T L + + E
Sbjct: 226 DLKGAALSNVTGESFNGLEGLRTLDLSDNRLSRIPTAELVGMNRLEE 272
>gi|66809683|ref|XP_638564.1| C2 domain-containing protein [Dictyostelium discoideum AX4]
gi|60467175|gb|EAL65210.1| C2 domain-containing protein [Dictyostelium discoideum AX4]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 13/140 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLL----G 57
L L+ L++++NK +++ P ++ L EL +S N LT LP + +LT L + G
Sbjct: 241 LVSLEKLEIANNK-ITELCPEIANLPKLEELIISGNPLTKLP--PNFSSLTSLEVLDASG 297
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
I E+ F +TKL +NL NNK+ E+ +++G L L IL+L DN+L+D+P + +
Sbjct: 298 CQLIRLPED--FSMMTKLLEVNLGNNKLVELPNHIGRLTRLVILNLMDNKLSDLPMSIGN 355
Query: 118 LFHLKSLFLG----GNPIKT 133
+ L L G GNPIK+
Sbjct: 356 IHGLGKLGAGINIEGNPIKS 375
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)
Query: 22 LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN---------------KINNMEN 66
LF + ++ +++L +NQ M P K LT L+L N K+ ++
Sbjct: 169 LFDHVPNVQDIDLGFNQFKMFPSLISFKKLTTLVLNGNYILTVPGEVLDLPKLKVLSING 228
Query: 67 DYFLTL-------TKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ ++L L L + NNKI+E+ + +L L L +S N LT +P SSL
Sbjct: 229 NHLISLPSEISKLVSLEKLEIANNKITELCPEIANLPKLEELIISGNPLTKLPPNFSSLT 288
Query: 120 HLKSLFLGG 128
L+ L G
Sbjct: 289 SLEVLDASG 297
>gi|68395236|ref|XP_692401.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Danio
rerio]
Length = 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L +L+ L L N++ + +FI MR+L+EL+L N LT LP L L L N
Sbjct: 125 LLNLRFLMLGQNQIANLKPNMFIGMRNLSELDLPLNALTALPPNAFKPLIALKVLDLSLN 184
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCE-LSS 117
+I + F+ L +L LN+ NNK+ + + G L L +L L +N L+ + L
Sbjct: 185 RIQRISPKAFVGLEELLFLNMDNNKLKSIQAGTFGPLTGLEMLVLDNNLLSTLTVSTLEG 244
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEI 175
L +L+ L++ N I+++ D+ + + ++H+ S H +DG +++ + E+
Sbjct: 245 LSNLQELYVRKNEIESLPADVFLHTPK-LTHVGLSGNRLHA--IDGNMLANMQGLKEV 299
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKIN 62
++++ L N + S F + L LNL N+++ +PV D NL L+LG N+I
Sbjct: 80 IESVKLERNSIKSIHPQAFAGAQRLMLLNLQGNRISKIPVKGFKDLLNLRFLMLGQNQIA 139
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSSLFH 120
N++ + F+ + LS L+L N ++ + N LI L +LDLS N + + P L
Sbjct: 140 NLKPNMFIGMRNLSELDLPLNALTALPPNAFKPLIALKVLDLSLNRIQRISPKAFVGLEE 199
Query: 121 LKSLFLGGNPIKTVR 135
L L + N +K+++
Sbjct: 200 LLFLNMDNNKLKSIQ 214
>gi|126339630|ref|XP_001368917.1| PREDICTED: lumican-like [Monodelphis domestica]
Length = 341
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 2 LSHLKTLDLSHNKLVSDSL-PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L ++L HN+L D++ F ++ L L+LSYNQLT LP LT L L NK
Sbjct: 161 LINLTFVNLQHNQLKEDAVSAAFKSLKKLEYLDLSYNQLTKLPSGLPISLLT-LYLDNNK 219
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISE--VSSNVGDLINLAILDLSDNELTDVPCELSSL 118
I+N+ ++YF L+ L L L +N++++ + N ++ L LDLS N+L +P +L
Sbjct: 220 ISNVPDEYFKRLSALQYLRLSHNQLADSGIPGNSFNVSTLIELDLSYNKLKKIPAVNENL 279
Query: 119 ------------FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNV 161
F +KS P+ R L+ ++SH K Y C V
Sbjct: 280 ENYYLEVNEIDKFEVKSFCRVLGPLSYSRVKHLRLDGNLLSHSKLPSEIYDCLRV 334
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
++ L+ L L +N+L + + +F ++ L +L+++YN LT + V K+L L L +N
Sbjct: 90 VTDLQWLILDNNRLENSKIKGKIFAKLKQLKKLHINYNNLTEV-VGPLPKSLDDLQLAYN 148
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISE--VSSNVGDLINLAILDLSDNELTDVPCELSS 117
KI + F L L+ +NL++N++ E VS+ L L LDLS N+LT +P L
Sbjct: 149 KITKISPSSFEGLINLTFVNLQHNQLKEDAVSAAFKSLKKLEYLDLSYNQLTKLPSGLP- 207
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGG 164
L +L+L N I V ++ KR +S ++ RL H Q D G
Sbjct: 208 -ISLLTLYLDNNKISNVPDEYF---KR-LSALQYLRLS-HNQLADSG 248
>gi|444724187|gb|ELW64799.1| Leucine-rich repeat and IQ domain-containing protein 4 [Tupaia
chinensis]
Length = 561
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGF-- 58
LS L+ LDLS+N + + +R+L EL L L LPV CKNL HL LLG
Sbjct: 94 LSSLEGLDLSYNPFLPSFPHVISSLRALRELRLYQTDLRELPVGI-CKNLHHLELLGLAR 152
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + ++ + + TKL + LK N++ + L NL ++D+ +N + +P E+ L
Sbjct: 153 NHLKSLPKE-VVNQTKLREIYLKQNELEVFPQELCVLCNLEVIDVDENRIHAIPEEIGHL 211
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
L+ L+ N + ++ + + SK + + + L HC G++ +EI +
Sbjct: 212 TELQKLYAAHNRLPSLPESLCKCSKMAVLDVSHNLL--HCIPHSLAGLT---QMTEIGLS 266
Query: 179 KYKLDRTKTLT 189
+L++ L
Sbjct: 267 GNRLEKVPRLV 277
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 23 FIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNL 80
F + SL L+LS N L PV C KNL L L NKI + F +L+KL +L L
Sbjct: 299 FKRLGSLRFLDLSQNHLDHCPVQICA-LKNLEFLALDDNKIGQVLPSEFGSLSKLKILGL 357
Query: 81 KNNKISEVSSNVGDLINLAILDLSDNE---LTDVPCELSSLFHLKSLFLGGN 129
N+ S + L +L L + ++ LT VP + L L+ L++ N
Sbjct: 358 TGNEFSYFPEEIFSLESLEKLYIGQDQGSKLTCVPEHIVKLQSLRELYIENN 409
>gi|124003273|ref|ZP_01688123.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123991371|gb|EAY30802.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 302
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 26 MRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNK 84
M++L L L YNQL LP + L + +G+N I+ + + LT+L LNL++N+
Sbjct: 155 MQNLQVLELDYNQLKSLPAALGKLQKLRLISVGYNHISALPAQLY-QLTQLHKLNLEHNQ 213
Query: 85 ISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTV 134
I E+ ++G + NL L LS+N LT +P ++ L ++ L L N I T+
Sbjct: 214 IKELKKDIGQMKNLNALILSNNHLTQLPESITQLSKMELLVLSNNKIATM 263
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 72 LTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPI 131
L +L LNL NK+++ ++ L L +L++ N+LTD+P + L LK L L N I
Sbjct: 63 LPQLKFLNLMKNKLTQWHPSIFTLSELEVLNIRQNKLTDIPEGIGKLTQLKRLNLAKNKI 122
Query: 132 KTVRNDILQDSKRIISHIKTSRLD 155
K + I Q K + H+ + L+
Sbjct: 123 KALPTSIGQLKKLRLLHMMINHLE 146
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 30 TELNLSYNQLTMLPVCTD-CKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEV 88
T LNL L P D L L L NK+ F TL++L +LN++ NK++++
Sbjct: 44 TLLNLRNQALQEAPQGLDKLPQLKFLNLMKNKLTQWHPSIF-TLSELEVLNIRQNKLTDI 102
Query: 89 SSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISH 148
+G L L L+L+ N++ +P + L L+ L + N ++ L +S + +
Sbjct: 103 PEGIGKLTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQ-----LPESMGTMQN 157
Query: 149 IKTSRLDY 156
++ LDY
Sbjct: 158 LQVLELDY 165
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 25/147 (17%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L LK L+L NKL P + L LN+ N+LT +P G K
Sbjct: 63 LPQLKFLNLMKNKLTQWH-PSIFTLSELEVLNIRQNKLTDIPE------------GIGK- 108
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
LT+L LNL NKI + +++G L L +L + N L +P + ++ +L
Sbjct: 109 ----------LTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQLPESMGTMQNL 158
Query: 122 KSLFLGGNPIKTVRNDILQDSK-RIIS 147
+ L L N +K++ + + K R+IS
Sbjct: 159 QVLELDYNQLKSLPAALGKLQKLRLIS 185
>gi|456825364|gb|EMF73760.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 266
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 5 LKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
++ L LS KL + LP I+ +++L L+L YNQ +P KNL L L +N+
Sbjct: 52 VRILILSEQKLTT--LPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFK 109
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ L L +LNL +N+++ + +G L NL +L+LS N+L +P E+ L +L+
Sbjct: 110 TVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQ 168
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYH 157
L LG N +KT+ I Q + +++T L+Y+
Sbjct: 169 VLNLGSNRLKTLPKGIEQ-----LKNLQTLYLNYN 198
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I +++L LNLS NQLT LP +NL L L N
Sbjct: 95 LKNLQMLDLCYNQF--KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 152
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ + + L NL L L+ N+LT +P E+ L
Sbjct: 153 QLITLPKEIG-KLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ 211
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
L L L N I T+ ++I+Q
Sbjct: 212 SLTELHLQHNQIATLPDEIIQ 232
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +L+ LDL +N+ ++P I+ +++L L+L YNQ +P KNL L L N
Sbjct: 72 LKNLQMLDLCYNQF--KTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSN 129
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + + L L +LNL +N++ + +G L NL +L+L N L +P + L
Sbjct: 130 QLTTLPKEIG-KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLK 188
Query: 120 HLKSLFLGGNPIKTVRNDI 138
+L++L+L N + T+ +I
Sbjct: 189 NLQTLYLNYNQLTTLPREI 207
>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLL-LGFN 59
L L+ L+L+ N+L S S + L L+ +NQLT LP NLTH L L N
Sbjct: 143 LGRLQALNLAENQLSSLS-ERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNN 201
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + F LT+L+ LN+ +N+++E+ ++G L NL L + +N+L +P EL +L
Sbjct: 202 RLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLA 261
Query: 120 HLKSLFLGGNPIKTV 134
L+ L N ++T+
Sbjct: 262 ALRELHAMNNRLETL 276
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 10 LSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDC-KNLTHL-------------- 54
LS+N+L + S LF + L LN++ NQLT LP C NL L
Sbjct: 198 LSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEEL 257
Query: 55 --LLGFNKINNMEN------DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDN 106
L +++ M N D L +L L L NN+++ + + +G+L NL LDL +N
Sbjct: 258 GNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNN 317
Query: 107 ELTDVPCELSSLFHLKSLFLGGNPIKTV 134
L +P L +L L++L L N + T+
Sbjct: 318 LLASLPASLDNLAKLRALDLRANRLTTL 345
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L++LK L + +N+L + LP + ++ +L EL+ N+L LP K L L L N
Sbjct: 237 LTNLKELRIYNNQLAT--LPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANN 294
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
++ + Y L L+ L+L+NN ++ + +++ +L L LDL N LT +P L L
Sbjct: 295 RLARLPT-YLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQ 353
Query: 120 HLKSL---FLGGNPIKTVRNDILQ 140
HL+ L +L +P+ T + + Q
Sbjct: 354 HLEKLDLRWLKLSPLPTWLDQLEQ 377
>gi|291402591|ref|XP_002717502.1| PREDICTED: fibromodulin [Oryctolagus cuniculus]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 10 LSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
L N++ SD + +F +R L L L +N LT +P ++L L L N+I+ + N+
Sbjct: 136 LHGNQITSDKVGRRVFSKLRHLERLYLDHNNLTRMPGPLP-RSLRELHLDHNQISRVPNN 194
Query: 68 YFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLG 127
L L+ L L++N+I EV S++ L +L +LDLS N L VP L S L+ L+L
Sbjct: 195 ALEGLENLTALYLQHNEIQEVGSSMRGLRSLILLDLSYNHLRRVPDGLPSA--LEQLYLE 252
Query: 128 GNPIKTVRNDILQDSKRII 146
N + TV + + S +++
Sbjct: 253 HNNVYTVPDSYFRGSPKLL 271
>gi|168052852|ref|XP_001778853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669722|gb|EDQ56303.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 277
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 2 LSHLKTLDLSHN--KLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L +L+ LDL HN KL+ DS+ L + L L++S NQL +LP C L L+ F
Sbjct: 60 LVNLEVLDLQHNQLKLLPDSIGL---LSKLNSLDVSGNQLRVLPASLGRCSALVELIANF 116
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ +D+ L+ L +L L NK++ + +VG+L L +LD+ N+L +P + +L
Sbjct: 117 NELEMWPSDFGFQLSNLQILRLHLNKLTCLPPSVGELRALRVLDVHFNKLRGLPSTIGNL 176
Query: 119 FHLKSLFLGGN 129
+L L + N
Sbjct: 177 TNLSILDVSSN 187
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 67 DYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFL 126
+ F +T L +LNL NN++ + ++ L+NL +LDL N+L +P + L L SL +
Sbjct: 32 ESFGRITSLIVLNLSNNRLEFLPDSIAGLVNLEVLDLQHNQLKLLPDSIGLLSKLNSLDV 91
Query: 127 GGNPIKTV 134
GN ++ +
Sbjct: 92 SGNQLRVL 99
>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
30864]
Length = 490
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+L +L LDL HNK ++ P+ M+ L++L L YN+LT + D NLT
Sbjct: 17 LLKNLNVLDLRHNKF-TEVPPVIYRMKQLSKLYLRYNKLTW--ISHDIGNLT-------- 65
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
L++L+++NNKI+E+ +++G+L L ILDL +N LT +P + L
Sbjct: 66 -------------GLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSR 112
Query: 121 LKSLFLGGNPIKTVRNDI 138
L SL + N ++ + +I
Sbjct: 113 LSSLNVEYNKLERLPEEI 130
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN- 63
L+ L++ NKLV + + ++ L LS N T +P D LT L + FN NN
Sbjct: 159 LEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIP--ADLGALTKLEI-FNMDNNS 215
Query: 64 ---MENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ F +L L +NL N I+ + +++GDL++L ++L N+L +P L L +
Sbjct: 216 VREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVN 275
Query: 121 LKSLFLGGN 129
L+SL LG N
Sbjct: 276 LESLVLGNN 284
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 25/137 (18%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
L L+ LDL N+L LP + +L EL+ N+LT LP LG
Sbjct: 296 LVKLRVLDLEGNRLTR--LPEIGSLAALEELHAQSNRLTALPQS----------LG---- 339
Query: 62 NNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHL 121
L L L + N+++E+ ++G L +L ++DN L+DVPCEL++ L
Sbjct: 340 ---------NLHALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKL 390
Query: 122 KSLFLGGNPIKTVRNDI 138
+ L L NP+ + ++
Sbjct: 391 QLLNLDDNPLTAIPPNV 407
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+ L+ ++ +N + +F ++ L ++NL+YN +T +P D +L + LG NK
Sbjct: 203 LTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNK 262
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L L NN +S + + L+ L +LDL N LT +P E+ SL
Sbjct: 263 LELLP-ETLGQLVNLESLVLGNNNLSALPESASRLVKLRVLDLEGNRLTRLP-EIGSLAA 320
Query: 121 LKSLFLGGN 129
L+ L N
Sbjct: 321 LEELHAQSN 329
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 36 YNQLTMLPVCTDC-KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD 94
+ QLT LP + KNL L L NK + + + +LS L L+ NK++ +S ++G+
Sbjct: 5 HPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIY-RMKQLSKLYLRYNKLTWISHDIGN 63
Query: 95 LINLAILDLSDNELTDVPCELSSLFHLKSLFLGGN 129
L L IL + +N++T++P L +L L+ L L N
Sbjct: 64 LTGLNILSIRNNKITELPASLGNLAGLQILDLMNN 98
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 25 DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN---------------KINNMENDY 68
D+ SL E+NL N+L +LP NL L+LG N ++ ++E +
Sbjct: 249 DLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPESASRLVKLRVLDLEGNR 308
Query: 69 FL------TLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+L L L+ ++N+++ + ++G+L L + + +N+LT++P + L L
Sbjct: 309 LTRLPEIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPLSIGQLKSLT 368
Query: 123 SLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKL 182
S + N + V ++ K + ++ + L NV GG S+ + + K
Sbjct: 369 SFHVNDNRLSDVPCELANCLKLQLLNLDDNPLTAIPPNVTSGGPSA------VMVYLRKK 422
Query: 183 DRTKTLTLCKVINIPESV 200
+RTK + K+IN P++V
Sbjct: 423 NRTK-VEQAKLIN-PDAV 438
>gi|359728338|ref|ZP_09267034.1| molybdate metabolism regulator [Leptospira weilii str. 2006001855]
Length = 1638
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L L+LS N+L + LP F + L EL +++NQ T +P KNL + + N
Sbjct: 1288 LKRLTNLNLSENQLTT--LPAGFGRLEQLAELFMNFNQFTTIPESVVSLKNLKIISVLEN 1345
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+I+++ D LT L L++ N+IS V S++ +L +L L LS N+L+D P + L
Sbjct: 1346 QISSL-PDGIGNLTSLEDLDVSGNQISTVPSSMQNLSSLTKLTLSKNQLSDFPEPVLPLK 1404
Query: 120 HLKSLFLGGNPIKTVRNDILQ 140
+LK L L NPI ++ I Q
Sbjct: 1405 NLKCLCLRENPISSLPESIGQ 1425
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 25 DMRSLTELNLSYNQLTMLPVC-TDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
+++ LT LNLS NQLT LP + L L + FN+ + + ++L L ++++ N
Sbjct: 1287 NLKRLTNLNLSENQLTTLPAGFGRLEQLAELFMNFNQFTTI-PESVVSLKNLKIISVLEN 1345
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
+IS + +G+L +L LD+S N+++ VP + +L L L L N + +L
Sbjct: 1346 QISSLPDGIGNLTSLEDLDVSGNQISTVPSSMQNLSSLTKLTLSKNQLSDFPEPVL 1401
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 9 DLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMENDY 68
+L ++ V D+ PL +++SL ++ L + L + + C L + L + I E+D+
Sbjct: 1177 ELEIDEPVKDASPL-AELKSLKKIKLRNWNVKDLTILSSCPQLEEVEL--DSIQGFESDF 1233
Query: 69 ----------------------------FLTLTKLSLLNLKNNKISEVSSNVGDLINLAI 100
T L+ L+L+ +SEVS +G+L L
Sbjct: 1234 DCSDLLSGSNAKISLDLVGTKFERFPAAVTTFQSLTSLSLRACNLSEVSDRIGNLKRLTN 1293
Query: 101 LDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L+LS+N+LT +P L L LF+ N T+ ++
Sbjct: 1294 LNLSENQLTTLPAGFGRLEQLAELFMNFNQFTTIPESVV 1332
>gi|195432020|ref|XP_002064024.1| GK19942 [Drosophila willistoni]
gi|194160109|gb|EDW75010.1| GK19942 [Drosophila willistoni]
Length = 1261
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
L+ L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LTCLRSLDLRHNQLKNSGIPPELFY-LEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N++ + F+ LT L L+L +N++ + L+NL LDLS N P EL L
Sbjct: 133 NQLEAIPTALFIHLTDLLFLDLSHNRLETLPPQTRRLVNLKTLDLSHN-----PLELFQL 187
Query: 119 FHLKSL 124
L SL
Sbjct: 188 RQLPSL 193
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDC-KNLTHLLLGF 58
L +LKTLDLSHN L L ++SL LN+S Q T+L P D NL L L
Sbjct: 169 LVNLKTLDLSHNPLELFQLRQLPSLQSLEVLNMSGTQRTLLNFPTSLDSLANLCELDLSH 228
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N + + D + L LNL +N+I+E+SS++ L L+LS N+L +P L L
Sbjct: 229 NSLPKLP-DCVYQVATLVRLNLSDNEINELSSSMEFWQRLESLNLSRNQLITLPAALCKL 287
Query: 119 FHLKSLFLGGN 129
L+ LF+ N
Sbjct: 288 SKLRRLFVNDN 298
>gi|326932819|ref|XP_003212510.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein
4-like [Meleagris gallopavo]
Length = 598
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
+ +L+ LDLS+NKL F +R L L+L N L +P V DC+NL L LG+N
Sbjct: 212 VPNLRNLDLSYNKLQVLQSEQFKGLRKLLILHLRSNSLKSVPIRVFQDCRNLDFLDLGYN 271
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVS-SNVGDLINLAILDLSDNELTDVPCELSSL 118
++ ++ + F L KL+ L+L++N+ S+++ ++ L NL + L N + + L+
Sbjct: 272 RLRSLSRNAFAGLLKLTELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWT 331
Query: 119 F-HLKSLFLGGNPIKTVRNDILQ 140
+ L +L L GN I + Q
Sbjct: 332 WSSLHNLDLSGNDITGIEPGTFQ 354
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L L L L N L S + +F D R+L L+L YN+L L LT L L N
Sbjct: 236 LRKLLILHLRSNSLKSVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLTELHLEHN 295
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDV-PCELSS 117
+ + + +F L L + L+ N+I +S + +L LDLS N++T + P
Sbjct: 296 QFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDITGIEPGTFQC 355
Query: 118 LFHLKSLFLGGNPIKTVRNDILQDSKRIIS 147
L +L+ L L N + + + + +IS
Sbjct: 356 LPNLQKLNLDSNKLTNISQETINTWISLIS 385
>gi|195144232|ref|XP_002013100.1| GL23942 [Drosophila persimilis]
gi|194102043|gb|EDW24086.1| GL23942 [Drosophila persimilis]
Length = 333
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
L+ L L+ N L S LP + + + L L+L +N+L +P V + LT L L FN+I
Sbjct: 21 LRNLALNENSLTS--LPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRIT 78
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
+ D L L++L+L+ NKI E+ S +G L+NL LD+S N L +P ++ + +L
Sbjct: 79 AVA-DNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLS 137
Query: 123 SLFLGGN 129
+L L N
Sbjct: 138 ALDLQHN 144
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 28/160 (17%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFNKI 61
LK LDL HNKL ++ P+ +R+LT L L +N++T V + + NLT L L NKI
Sbjct: 44 LKVLDLRHNKL-AEIPPVIYRLRTLTTLYLRFNRITA--VADNLRQLVNLTMLSLRENKI 100
Query: 62 NNMEN--DYFLTLT--------------------KLSLLNLKNNKISEVSSNVGDLINLA 99
+ + + LT LS L+L++N++ ++ ++G+L +L
Sbjct: 101 RELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLV 160
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDIL 139
L L N L+ VP L + + + GN + + + +L
Sbjct: 161 RLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGML 200
>gi|418746332|ref|ZP_13302662.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|418753926|ref|ZP_13310162.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|421111207|ref|ZP_15571686.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|409965767|gb|EKO33628.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|410792879|gb|EKR90804.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410803389|gb|EKS09528.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
+ ++ L L HN+L + P I +++L L+LSY QLT++P + KNL L L N+
Sbjct: 49 TDVRVLSLVHNQLTT--FPKEIGQLQNLQVLSLSYGQLTIIPKEVGNLKNLQTLDLAENQ 106
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + L L L+L N+++ + +G L NL L L +N+LT +P E+ +L +
Sbjct: 107 LKTLPKEIG-NLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYENQLTKLPNEIGNLKN 165
Query: 121 LKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
L++L + GNP + D + K+++ ++K +
Sbjct: 166 LQTLDVSGNPALISQKDKI---KKLLPNVKIT 194
>gi|423646615|ref|ZP_17622185.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD169]
gi|401287124|gb|EJR92929.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD169]
Length = 984
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +KTLDL N + D PLF + ++ +L L+ NQ++ L N+ L +G NKI
Sbjct: 305 MKKIKTLDLIGNN-IKDIQPLFT-LSTMKQLYLANNQISDLTGIDRLNNVELLWIGNNKI 362
Query: 62 NNMENDYFLTLTKLSL---LNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
NN+E +++K+S L + +++I ++SS + L NL +L+L +N ++DV LS+L
Sbjct: 363 NNVE-----SISKMSYLIELEISDSEIKDISS-LSQLGNLQVLNLEENYISDV-SPLSTL 415
Query: 119 FHLKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVD 162
+L + LG N I VR + + KRI I+ ++ + +VD
Sbjct: 416 TNLHEINLGANEISDVR-PVEELGKRISIDIQRQKIFLNEASVD 458
>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 448
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQL-TMLPVCTDCKNLTHLLLGFN 59
L L+ LD+ +N+L +LP I +++L L L +NQL T+ P + KNL L + +N
Sbjct: 174 LKQLQRLDIRNNRL--SALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYN 231
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+++ + + L L L L NK+ + ++G L NL +L L+ N+LT +P E+S L
Sbjct: 232 QLHRLPVEIG-QLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLH 290
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRIISHIKTS 152
L+ L L N ++ +I+ + + H+ S
Sbjct: 291 RLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGAS 323
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKIN 62
HL L++ H +SL + E ++NQ++ LP L L LG +
Sbjct: 311 HLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLL 370
Query: 63 NMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLK 122
N+ + L L +L L NN + V +G L NL L+LS N+L +P EL +L L+
Sbjct: 371 NLPPEIG-QLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLE 429
Query: 123 SLFLGGNPIKT 133
L L NP+
Sbjct: 430 YLNLSNNPLPA 440
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 40 TMLPVCTDCKNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLA 99
T+ P K L L L +N + + L+ L LNL N++ + +G L L
Sbjct: 120 TLPPEIGQLKQLKTLNLSGGNLNRLPPEIG-QLSNLQSLNLYKNQLRTLPPEIGQLKQLQ 178
Query: 100 ILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
LD+ +N L+ +P E+ L +LK L L N +KT+ +I
Sbjct: 179 RLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEI 217
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 58 FNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSS 117
FN+++++ + LT+L LNL + + + +G L+NL +L LS+N L VP E+
Sbjct: 343 FNQVSSLPPEIG-QLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGR 401
Query: 118 LFHLKSLFLGGNPIKTVRNDI 138
L +L+ L L N +K++ ++
Sbjct: 402 LANLQGLELSYNQLKSLPPEL 422
>gi|357604744|gb|EHJ64305.1| putative toll [Danaus plexippus]
Length = 1306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 8 LDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINNME 65
L++S+NKL +F D+ SL +LNL YN +T + + +NL L L NKI ++
Sbjct: 318 LNISYNKLTRIDRYMFQDLYSLQKLNLEYNDITSIEERAFEELRNLHSLTLSNNKITHIH 377
Query: 66 NDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCELSSLFHLKSL 124
F L L L L NN+I + N D + + L L+DN L+ +P + L L+SL
Sbjct: 378 THIFSELHVLHELFLDNNQIKHIDENAFDNMTTIEDLSLNDNALSSIPLSIRKLRSLRSL 437
Query: 125 FLGGNPI 131
+G N I
Sbjct: 438 DIGNNNI 444
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 9 DLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLL---LGFNKINNM 64
DLS N S+PL I +RSL L++ N +T L + + L+ L L NK+ +
Sbjct: 413 DLSLNDNALSSIPLSIRKLRSLRSLDIGNNNITHLSR-ENFRGLSELFGLRLVDNKVTYL 471
Query: 65 ENDYFLTLTKLSLLNLKNNKISEVSSN-VGDLINLAILDLSDNELTDVPCELSSLFHLKS 123
+ F L +L +LNL +NKI V++ +NL +L + NE+T+ SSL L
Sbjct: 472 NENTFEHLPQLQVLNLASNKIKLVAAGCFRKNVNLKLLRMDGNEITNFDGIFSSLNSLVW 531
Query: 124 LFLGGNPIKT 133
L + N I T
Sbjct: 532 LNMSANKIST 541
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-------------CTDC 48
LS L LDLS N + S F + SL +LN++ N L + C
Sbjct: 130 LSELIELDLSDNNIWSTKTDTFCSLYSLKKLNITNNHLQNIKTIGFADSSREQNLSVKSC 189
Query: 49 K-NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDN 106
L L + +N + + + L L+ L L+NN IS + + LI+L IL+LS N
Sbjct: 190 NLALEVLDMSYNDLIVITENSLSKLRSLTKLFLQNNAISTLEDGAFEGLISLQILNLSSN 249
Query: 107 ELTDVPCEL-SSLFHLKSLFLGGNPIKTV 134
+ ++P ++ S LK +FL N IK +
Sbjct: 250 FINNIPQDIFSDTKFLKEIFLSNNTIKVL 278
>gi|284010765|dbj|BAI66862.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 239
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 6 KTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKINN 63
K L+L +NKL S F + LT L+LS NQL LP V L L LG N++ +
Sbjct: 43 KKLELDYNKLSSLPSKAFHHLSKLTYLSLSTNQLPTLPAGVFDQLVELDRLELGRNQLKS 102
Query: 64 MENDYFLTLTKLSLLNLKNNKISEVSSNVGD-LINLAILDLSDNELTDVPCE-LSSLFHL 121
+ + F LTKL+ L L +NK+ + V D L L L+L+ N+L VP SL ++
Sbjct: 103 LPSGIFDKLTKLTDLRLSSNKLQSLPHGVFDNLAKLTRLELNTNQLRSVPNRAFDSLSNI 162
Query: 122 KSLFLGGNPIKTVRNDIL 139
K+L+L NP DIL
Sbjct: 163 KTLWLDTNPWDCSCKDIL 180
>gi|443329489|ref|ZP_21058074.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
gi|442790827|gb|ELS00329.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
Length = 806
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+S+L+ LDLS+N L SLP I + +LT L LS N L+ LP NLT L L
Sbjct: 142 QISNLEGLDLSNNSL--SSLPPEIGQISNLTALYLSNNSLSSLPPEIGQLSNLTELYLLN 199
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N ++++ + + L+ L++L+L NN +S + + L NL ILDL++N L+ +P + L
Sbjct: 200 NSLSSLPPE-IVQLSNLTILDLNNNFLSSLPPEIIQLSNLTILDLNNNFLSSLPPGIVRL 258
Query: 119 FHLKSLFLGGNPIKTVRNDILQ 140
+L LFL N + + +I Q
Sbjct: 259 SNLTELFLSNNSLSNLPPEISQ 280
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+S+L L LS+N L SLP I + +LTEL L N L+ LP NLT L L
Sbjct: 165 QISNLTALYLSNNSL--SSLPPEIGQLSNLTELYLLNNSLSSLPPEIVQLSNLTILDLNN 222
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N ++++ + + L+ L++L+L NN +S + + L NL L LS+N L+++P E+S L
Sbjct: 223 NFLSSLPPE-IIQLSNLTILDLNNNFLSSLPPGIVRLSNLTELFLSNNSLSNLPPEISQL 281
Query: 119 FHLKSLFLGGN 129
F+L+ L + N
Sbjct: 282 FNLRHLSVSNN 292
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%)
Query: 76 SLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVR 135
+L+L +++E+ +G + NL LDLS+N L+ +P E+ + +L +L+L N + ++
Sbjct: 124 GVLDLSRMELTELPPEIGQISNLEGLDLSNNSLSSLPPEIGQISNLTALYLSNNSLSSLP 183
Query: 136 NDILQ 140
+I Q
Sbjct: 184 PEIGQ 188
>gi|198433010|ref|XP_002131358.1| PREDICTED: flightless I-like [Ciona intestinalis]
Length = 1235
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L LK+++ SHN L S+P I + L+ L+LS+NQLT +P +CK L L + N
Sbjct: 77 LPQLKSINASHNHLKDASIPTDIFKLEDLSVLDLSHNQLTAVPQDLENCKTLLVLNMSHN 136
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPC-ELSSL 118
+I ++ F+ LT L L+ NN + + + L++L IL L+DN L V +L S+
Sbjct: 137 QIESIPPQLFINLTDLLHLDWSNNNLETLPPQLRRLVHLKILVLNDNPLLHVQLRQLPSM 196
Query: 119 FHLKSLFL 126
L +L L
Sbjct: 197 VALTTLHL 204
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQ--LTMLPVCTDC-KNLTHLLLGF 58
L HLK L L+ N L+ L M +LT L+L Q ++ P D K+LT + L
Sbjct: 172 LVHLKILVLNDNPLLHVQLRQLPSMVALTTLHLRNTQRNISNFPSNLDMLKSLTDIDLSC 231
Query: 59 NKINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSL 118
N+++ + ++ L+ L LNL NN+I E+S + + L+L++N LT +P L L
Sbjct: 232 NELSRLPESLYM-LSTLERLNLSNNEIQELSLLIDTWTKMQTLNLTNNLLTSLPTSLCKL 290
Query: 119 FHLKSLFLGGN 129
L+ LF+ N
Sbjct: 291 QSLRCLFISDN 301
>gi|170050094|ref|XP_001859229.1| carboxypeptidase N subunit 2 [Culex quinquefasciatus]
gi|167871667|gb|EDS35050.1| carboxypeptidase N subunit 2 [Culex quinquefasciatus]
Length = 607
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKN--LTHLLLGFNK 60
SHLK+L L N++ L ++ L N+SYNQL + + +N L L L FNK
Sbjct: 233 SHLKSLQLQGNQITVFEADLLSNLPRLMFFNISYNQLENIADHSFKRNADLRVLDLSFNK 292
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNV-GDLINLAILDLSDNELTDVPCELSSLF 119
I N D F L L + N NN ++E++ + D L +LDLS N LT V +L
Sbjct: 293 IENFHEDSFKGLASLEVFNASNNHLAELNKYMFKDFSALRLLDLSANRLTYVENKLFEYS 352
Query: 120 -HLKSLFLGGNPIKTVRNDILQDSKRI 145
++ L L N I + ++I +D +++
Sbjct: 353 PRMEYLNLSRNAIAEIEHNIFEDFRKL 379
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCT--DCKNLTHLLLGFN 59
L HL TLDL N + + + +LT+L L+ N ++ +P T NL HL LG N
Sbjct: 136 LEHLHTLDLRRNLIKAINEHSLDRYPNLTKLILTGNLISHIPEGTFKVVPNLKHLNLGRN 195
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+ ++E L+KLS +N+IS V A + S
Sbjct: 196 LLTSIEEGTLKGLSKLSQAAFHHNQISYVDF-------FAFIGNS--------------- 233
Query: 120 HLKSLFLGGNPIKTVRNDILQDSKRII 146
HLKSL L GN I D+L + R++
Sbjct: 234 HLKSLQLQGNQITVFEADLLSNLPRLM 260
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFN 59
L+ L+ + S+N L + +F D +L L+LS N+LT + + + +L L N
Sbjct: 304 LASLEVFNASNNHLAELNKYMFKDFSALRLLDLSANRLTYVENKLFEYSPRMEYLNLSRN 363
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDV 111
I +E++ F KL +L+L +N++ E + + +INL L++S N +
Sbjct: 364 AIAEIEHNIFEDFRKLRILDLSHNRLVE-DAFLWPIINLHQLNMSHNSFARI 414
>gi|111308655|gb|AAI20376.1| Keratocan [Bos taurus]
gi|296487970|tpg|DAA30083.1| TPA: keratocan precursor [Bos taurus]
Length = 352
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILD--LSDNELTDVPCELSS 117
I + +YF + K++ L L +NK+S+ +ILD LS N+LT VP ++S+
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNQLTKVP-KISA 282
Query: 118 LFHLKSLFLGGNPIKTVRNDIL----------QDSKRIISHIKTSRLD 155
HL+ L+L N I+ V ++ +DS H++ RLD
Sbjct: 283 --HLQHLYLDHNKIRNVNVSVICPSTPTTLPVEDSFSYGPHLRYLRLD 328
>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
Length = 772
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L HL+ LD+S N+ VS P + L ELNL+ N +T +P +CK LT+L L N
Sbjct: 58 LRHLRILDVSDNE-VSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNP 116
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + +++L+L + ++ + +N+G L+NL +L+ +N L +P + L
Sbjct: 117 FTRLP-ESICECSSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQ 175
Query: 121 LKSLFLGGNPIK 132
L+ L LG N I+
Sbjct: 176 LEELDLGQNEIE 187
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNK 60
L L+ L + N L + P +LTEL L N LT LP D KNLT L + N
Sbjct: 265 LKRLQMLKVERNNLTQLT-PEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNN 323
Query: 61 INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH 120
+ + + + L++L+L+ N ISE+ +G N+ +LD++ N+LT +P + L+
Sbjct: 324 LIEIP-ETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYK 382
Query: 121 LKSLFLGGNPIKTV-RNDILQDSKRIISHIKTSRLDYHCQNVDGGG 165
L++L+L N +++ + ++D+K I + T L ++GGG
Sbjct: 383 LQALWLSENQTQSILKLSEIRDAKTGIK-VVTCYLLPQVDAIEGGG 427
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L L+ LDL N++ + LP I + SL E N L LP +DC+ L L + N
Sbjct: 173 LKQLEELDLGQNEI--EDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSEN 230
Query: 60 KINNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLF 119
+IN + + +++ L+ LN+ N I E+ ++G+L L +L + N LT + E+
Sbjct: 231 QINRLPENLG-SMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCS 289
Query: 120 HLKSLFLGGN 129
L L+LG N
Sbjct: 290 ALTELYLGQN 299
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 27 RSLTELNLSYNQLTMLPVCTDC---KNLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNN 83
R + L+ S + L +P TD + L L L N I ++ F TL L +L++ +N
Sbjct: 13 RQVDSLDRSQSNLQSVP--TDIFRFRKLEDLNLTMNNIKELDRRLF-TLRHLRILDVSDN 69
Query: 84 KISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDI 138
++S + ++G L L L+L+ N +TD+P L + L +L L GNP + I
Sbjct: 70 EVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESI 124
>gi|239792175|dbj|BAH72458.1| ACYPI001351 [Acyrthosiphon pisum]
Length = 309
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 31 ELNLSYNQLTMLPVCTDCK-NLTHLLLGFNKINNMENDYFLTLTKLSLLNLKNNKISEVS 89
+LNLS LT +P ++HL L NKI + +N + L L L L+L N+I V+
Sbjct: 14 KLNLSGLNLTEIPAKEIAPLKVSHLDLSNNKITSTDNVFSL-LPSLVKLDLSGNQIKSVA 72
Query: 90 SNVGDLINLAILDLSDNELTDVPCELSSLFHLKSLFLGGNPIKTVRNDILQDSKRIISHI 149
+++G L LA L L++N++ D+P LS L LK L L NP+K ++ +
Sbjct: 73 ADIGSLQKLAFLSLANNKIKDLPKGLSKLKQLKHLNLNNNPLKP----------ELVEAV 122
Query: 150 KTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
S+ + CQ+ + + S+ DK
Sbjct: 123 GPSQNNAQCQSAAANAIQYLKGDSKKQDDK 152
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,743,996,232
Number of Sequences: 23463169
Number of extensions: 143344399
Number of successful extensions: 613554
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7868
Number of HSP's successfully gapped in prelim test: 23348
Number of HSP's that attempted gapping in prelim test: 442767
Number of HSP's gapped (non-prelim): 125155
length of query: 263
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 123
effective length of database: 9,074,351,707
effective search space: 1116145259961
effective search space used: 1116145259961
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)