Your job contains 1 sequence.
>psy3787
MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK
INNMENDYFLTLTKLSLLNLKNNKISEVSSNVGDLINLAILDLSDNELTDVPCELSSLFH
LKSLFLGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY
KLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLTLCKVINIPESVY
MNRPFALTYNYVGDFFHFCLIKE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3787
(263 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-6062 - symbol:lrrc40 "leucine rich r... 177 1.4e-12 1
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 146 1.1e-07 1
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 146 1.3e-07 1
ZFIN|ZDB-GENE-060503-289 - symbol:lrrc47 "leucine rich re... 141 4.3e-07 1
WB|WBGene00002632 - symbol:let-413 species:6239 "Caenorha... 136 2.2e-06 1
UNIPROTKB|O61967 - symbol:let-413 "Protein lap1" species:... 136 2.2e-06 1
UNIPROTKB|E1BX56 - symbol:LRRTM1 "Uncharacterized protein... 134 2.6e-06 1
FB|FBgn0028487 - symbol:f-cup "flyers-cup" species:7227 "... 125 2.6e-06 2
TAIR|locus:2120825 - symbol:PIRL8 "AT4G26050" species:370... 132 2.6e-06 1
ZFIN|ZDB-GENE-040718-372 - symbol:lrrc57 "leucine rich re... 127 3.2e-06 1
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 133 3.4e-06 1
ZFIN|ZDB-GENE-050208-523 - symbol:shoc2 "soc-2 suppressor... 133 3.7e-06 1
UNIPROTKB|E2R416 - symbol:LUM "Uncharacterized protein" s... 128 6.1e-06 1
UNIPROTKB|F1SQ09 - symbol:LUM "Uncharacterized protein" s... 128 6.3e-06 1
UNIPROTKB|P51890 - symbol:LUM "Lumican" species:9031 "Gal... 128 6.3e-06 1
UNIPROTKB|E1BWI3 - symbol:RSU1 "Uncharacterized protein" ... 122 6.9e-06 1
ZFIN|ZDB-GENE-080327-24 - symbol:prelp "proline/arginine-... 128 7.6e-06 1
UNIPROTKB|Q05443 - symbol:LUM "Lumican" species:9913 "Bos... 127 8.2e-06 1
UNIPROTKB|A6QLV3 - symbol:SHOC2 "Leucine-rich repeat prot... 130 8.9e-06 1
UNIPROTKB|Q9UQ13 - symbol:SHOC2 "Leucine-rich repeat prot... 130 8.9e-06 1
UNIPROTKB|F2Z5G0 - symbol:SHOC2 "Uncharacterized protein"... 130 8.9e-06 1
UNIPROTKB|Q5RAV5 - symbol:SHOC2 "Leucine-rich repeat prot... 130 8.9e-06 1
UNIPROTKB|P51884 - symbol:LUM "Lumican" species:9606 "Hom... 126 1.1e-05 1
DICTYBASE|DDB_G0282725 - symbol:vilD "villin-like protein... 134 1.2e-05 1
MGI|MGI:1927197 - symbol:Shoc2 "soc-2 (suppressor of clea... 128 1.5e-05 1
UNIPROTKB|E1C7T4 - symbol:PRELP "Uncharacterized protein"... 125 1.7e-05 1
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 130 1.9e-05 1
UNIPROTKB|E2R260 - symbol:SHOC2 "Uncharacterized protein"... 127 2.0e-05 1
UNIPROTKB|E1BS02 - symbol:RSU1 "Uncharacterized protein" ... 122 2.0e-05 1
MGI|MGI:109347 - symbol:Lum "lumican" species:10090 "Mus ... 123 2.4e-05 1
RGD|1308146 - symbol:Shoc2 "soc-2 (suppressor of clear) h... 126 2.6e-05 1
DICTYBASE|DDB_G0278445 - symbol:mpl3 "putative protein ty... 127 3.3e-05 1
UNIPROTKB|Q15404 - symbol:RSU1 "Ras suppressor protein 1"... 120 3.5e-05 1
DICTYBASE|DDB_G0294094 - symbol:lrrA "leucine-rich repeat... 124 3.7e-05 1
UNIPROTKB|F1S6B4 - symbol:PRELP "Uncharacterized protein"... 122 3.8e-05 1
UNIPROTKB|Q5F4C4 - symbol:SHOC2 "Leucine-rich repeat prot... 124 3.9e-05 1
ZFIN|ZDB-GENE-040220-4 - symbol:tlr21 "toll-like receptor... 126 4.0e-05 2
UNIPROTKB|Q5E9C0 - symbol:RSU1 "Ras suppressor protein 1"... 119 4.6e-05 1
UNIPROTKB|E2R9R1 - symbol:RSU1 "Uncharacterized protein" ... 119 4.6e-05 1
UNIPROTKB|F1NRN7 - symbol:SHOC2 "Leucine-rich repeat prot... 123 5.1e-05 1
TAIR|locus:2032553 - symbol:HSL1 "HAESA-like 1" species:3... 126 5.3e-05 1
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 123 5.9e-05 1
MGI|MGI:1915557 - symbol:Lrriq4 "leucine-rich repeats and... 123 6.1e-05 1
UNIPROTKB|E2RL80 - symbol:PRELP "Uncharacterized protein"... 120 6.7e-05 1
MGI|MGI:2151110 - symbol:Prelp "proline arginine-rich end... 119 8.7e-05 1
RGD|620984 - symbol:Lum "lumican" species:10116 "Rattus n... 118 9.4e-05 1
MGI|MGI:103040 - symbol:Rsu1 "Ras suppressor protein 1" s... 116 0.00010 1
RGD|1591781 - symbol:Rsu1 "Ras suppressor protein 1" spec... 115 0.00010 1
UNIPROTKB|F1NDH7 - symbol:TSKU "Tsukushin" species:9031 "... 117 0.00014 1
UNIPROTKB|E2QW21 - symbol:LRRTM1 "Uncharacterized protein... 119 0.00014 1
DICTYBASE|DDB_G0291532 - symbol:DDB_G0291532 species:4468... 115 0.00015 1
UNIPROTKB|Q8AVI4 - symbol:shoc2 "Leucine-rich repeat prot... 119 0.00017 1
UNIPROTKB|A1A4H9 - symbol:LRRTM1 "Leucine-rich repeat tra... 118 0.00019 1
UNIPROTKB|Q86UE6 - symbol:LRRTM1 "Leucine-rich repeat tra... 118 0.00019 1
UNIPROTKB|I3L5J3 - symbol:LRRTM1 "Uncharacterized protein... 118 0.00019 1
MGI|MGI:1913856 - symbol:Lrrc57 "leucine rich repeat cont... 112 0.00022 1
UNIPROTKB|Q9BTT6 - symbol:LRRC1 "Leucine-rich repeat-cont... 117 0.00025 1
UNIPROTKB|P51888 - symbol:PRELP "Prolargin" species:9606 ... 115 0.00026 1
FB|FBgn0000709 - symbol:fliI "flightless I" species:7227 ... 123 0.00032 2
UNIPROTKB|Q65Z91 - symbol:TSKU "Tsukushin" species:9031 "... 114 0.00032 1
RGD|1585921 - symbol:LRRTM1 "leucine rich repeat transmem... 116 0.00032 1
RGD|621818 - symbol:Omd "osteomodulin" species:10116 "Rat... 114 0.00040 1
UNIPROTKB|C9JEE2 - symbol:LRRTM1 "Leucine-rich repeat tra... 109 0.00041 1
MGI|MGI:2389173 - symbol:Lrrtm1 "leucine rich repeat tran... 115 0.00042 1
MGI|MGI:2442313 - symbol:Lrrc1 "leucine rich repeat conta... 115 0.00042 1
UNIPROTKB|F1MX63 - symbol:PRELP "Prolargin" species:9913 ... 113 0.00044 1
TAIR|locus:2117617 - symbol:PIRL4 "plant intracellular ra... 115 0.00045 1
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 117 0.00049 1
RGD|619769 - symbol:Fmod "fibromodulin" species:10116 "Ra... 112 0.00056 1
RGD|620226 - symbol:Prelp "proline/arginine-rich end leuc... 112 0.00057 1
UNIPROTKB|Q9GKN8 - symbol:PRELP "Prolargin" species:9913 ... 112 0.00058 1
WB|WBGene00004929 - symbol:soc-2 species:6239 "Caenorhabd... 114 0.00060 1
UNIPROTKB|Q22875 - symbol:soc-2 "Leucine-rich repeat prot... 114 0.00060 1
UNIPROTKB|E2R423 - symbol:KERA "Uncharacterized protein" ... 111 0.00065 1
MGI|MGI:1328364 - symbol:Fmod "fibromodulin" species:1009... 111 0.00073 1
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 113 0.00082 1
MGI|MGI:2389177 - symbol:Lrrtm3 "leucine rich repeat tran... 113 0.00082 1
RGD|1304866 - symbol:Lrrtm3 "leucine rich repeat transmem... 113 0.00082 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 113 0.00084 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 113 0.00084 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 115 0.00086 1
>ZFIN|ZDB-GENE-030131-6062 [details] [associations]
symbol:lrrc40 "leucine rich repeat containing 40"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-6062 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY394934
EMBL:BC055223 IPI:IPI00499633 RefSeq:NP_956156.2 UniGene:Dr.80656
ProteinModelPortal:Q7SXW3 GeneID:334130 KEGG:dre:334130 CTD:55631
HOGENOM:HOG000005761 HOVERGEN:HBG081930 InParanoid:Q7SXW3
OrthoDB:EOG4M65HK NextBio:20810275 ArrayExpress:Q7SXW3
InterPro:IPR015766 PANTHER:PTHR23155:SF28 Uniprot:Q7SXW3
Length = 601
Score = 177 (67.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 62/265 (23%), Positives = 115/265 (43%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKI 61
+ +L+ LD S N++ S P+ M SL +L L +N+L LP CK L L G N+I
Sbjct: 217 MKNLRMLDCSRNQMESIP-PVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQI 275
Query: 62 NNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXX 121
+E ++ + + + L L LDL++N+++ +PC
Sbjct: 276 EVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKL 335
Query: 122 XXXXXGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQEST-----SEI 175
GNP++ +R D+L + + ++ +++ SR+ Q GG+ + T S+
Sbjct: 336 KSLSLEGNPLRAIRRDLLTKGTGELLKYLR-SRV----QEPPNGGLKEEPKTAMTFPSQA 390
Query: 176 NIDKYKLDRTKTLTLCKV--INIPESVYMRGMSSQECTIEINIDKYKLDRTKTLTLCKVI 233
I+ + + KTL + IP+ V+ +N K +L T +++
Sbjct: 391 KINVHAIKTLKTLDYSEKQDATIPDDVF--DAVDGNPVANVNFSKNQL----TAVPHRIV 444
Query: 234 NIPESVY-MNRPFALTYNYVGDFFH 257
++ +S+ +N F DF H
Sbjct: 445 DLKDSLADINLGFNKLTTIPADFCH 469
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/267 (21%), Positives = 113/267 (42%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+ LK LD N L +++P + M SL L L N+L +LP C+ L L L N+
Sbjct: 219 MKRLKHLDCDANLL--ETVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQ 276
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXX 120
I + ++ + V + L +L LDLS+N+++ +PC
Sbjct: 277 IEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLHL 336
Query: 121 XXXXXXGGNPIKTVRNDIL-QDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
G NP++T+R +I+ + ++ ++ ++++ D D ++ SE ++
Sbjct: 337 KFLALEG-NPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNI 395
Query: 180 YKLDRTKTLTLC--KVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLTLCKVINIPE 237
+ + K L + IP+ ++ + IN K +L +++ + E
Sbjct: 396 HAIATLKLLDYSDKQATLIPDDLF--DATKTTLITSINFSKNQLCEIPQ----RIVELKE 449
Query: 238 SVYMNRPFALTYNYVGDFFH-FCLIKE 263
V L++N + H CL+++
Sbjct: 450 MVL---DINLSFNKLSFISHELCLLQK 473
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+L L LD+ N+L S LP I ++ +L +LN+S+N+L +LP T KNL L L
Sbjct: 103 LLPALTVLDIHDNQLTS--LPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQH 160
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXX 118
N++ + F ++ V ++ L +L L+LS N+L ++P E
Sbjct: 161 NELTCIPEG-FEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRM 219
Query: 119 XXXXXXXXGGNPIKTVRNDI 138
N ++TV D+
Sbjct: 220 KRLKHLDCDANLLETVPPDV 239
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/113 (35%), Positives = 57/113 (50%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCK---NLTHLLLGFN 59
S LK LDL HNKL ++ P+ +RSLT L L +N++T V D + NLT L L N
Sbjct: 229 SQLKVLDLRHNKL-AEIPPVIYRLRSLTTLYLRFNRITA--VADDLRQLVNLTMLSLREN 285
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVP 112
KI + + + ++G+ +NL+ LDL NEL D+P
Sbjct: 286 KIREL-GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIP 337
>ZFIN|ZDB-GENE-060503-289 [details] [associations]
symbol:lrrc47 "leucine rich repeat containing 47"
species:7955 "Danio rerio" [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483
PROSITE:PS51450 SMART:SM00873 ZFIN:ZDB-GENE-060503-289
InterPro:IPR003591 SMART:SM00369 GO:GO:0003723 GO:GO:0004826
GeneTree:ENSGT00530000063489 EMBL:CT737125 EMBL:CR352301
IPI:IPI00890622 ProteinModelPortal:F1QAF8
Ensembl:ENSDART00000075129 ArrayExpress:F1QAF8 Uniprot:F1QAF8
Length = 575
Score = 141 (54.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
L +K LDLS N+L +LP I + L LN+S N LT LP + C L + + N
Sbjct: 106 LKAVKVLDLSVNQL--QALPEEICALTELNTLNVSCNSLTALPDGLSKCVKLASINVSKN 163
Query: 60 KINNMENDYF-XXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXX 118
+++ + D + I E+SS + +L +L +LDLS+N+L ++P E
Sbjct: 164 ELSRLPEDLWCSGLELLSSIIASENAIEELSSEIQNLPSLKVLDLSNNKLQELPAELADC 223
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKT-SRLDYHCQNVDGGGMSSQESTSEIN 176
GN +K R + ++++ T S LDY G G Q+ E+N
Sbjct: 224 PKLKETNFKGNKLKDKRLE------KMVNGCPTKSVLDYLRAGGRGKGKGKQQD-GEVN 275
>WB|WBGene00002632 [details] [associations]
symbol:let-413 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0060465
"pharynx development" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0030728 "ovulation" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0007043 "cell-cell junction
assembly" evidence=IMP] [GO:0030029 "actin filament-based process"
evidence=IMP] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0009792
GO:GO:0030728 GO:GO:0007163 GO:GO:0015031 eggNOG:COG4886
GO:GO:0040011 GO:GO:0007155 GO:GO:0016323 GO:GO:0005912
GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156 GO:GO:0007043
GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590 EMBL:FO081227 PIR:T33295
RefSeq:NP_001023850.1 RefSeq:NP_001023851.1 UniGene:Cel.6189
ProteinModelPortal:O61967 SMR:O61967 DIP:DIP-25349N IntAct:O61967
MINT:MINT-1058604 STRING:O61967 PaxDb:O61967 PRIDE:O61967
EnsemblMetazoa:F26D11.11b GeneID:179171 KEGG:cel:CELE_F26D11.11
UCSC:F26D11.11a CTD:179171 WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ LD+S N+L LP I ++ L ELNL+ N + LP +CK LT L L N
Sbjct: 58 LRHLRILDVSDNELAV--LPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN 115
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXX 119
+ + ++ + SN+G L NL +L+ DN L +P
Sbjct: 116 PFTRLP-ETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELR 174
Query: 120 XXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
G N ++ + +I + + ++ + L ++ G M Q SE I +
Sbjct: 175 KLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIR 234
Query: 180 Y--KLDRTKTLT-----LCKVINIPES 199
L R LT + ++I +P S
Sbjct: 235 LPENLGRMPNLTDLNISINEIIELPSS 261
>UNIPROTKB|O61967 [details] [associations]
symbol:let-413 "Protein lap1" species:6239 "Caenorhabditis
elegans" [GO:0045108 "regulation of intermediate filament
polymerization or depolymerization" evidence=IMP] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEP]
[GO:0015031 "protein transport" evidence=IEP] [GO:0005912 "adherens
junction" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0009792 GO:GO:0030728 GO:GO:0007163 GO:GO:0015031
eggNOG:COG4886 GO:GO:0040011 GO:GO:0007155 GO:GO:0016323
GO:GO:0005912 GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156
GO:GO:0007043 GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590
EMBL:FO081227 PIR:T33295 RefSeq:NP_001023850.1
RefSeq:NP_001023851.1 UniGene:Cel.6189 ProteinModelPortal:O61967
SMR:O61967 DIP:DIP-25349N IntAct:O61967 MINT:MINT-1058604
STRING:O61967 PaxDb:O61967 PRIDE:O61967 EnsemblMetazoa:F26D11.11b
GeneID:179171 KEGG:cel:CELE_F26D11.11 UCSC:F26D11.11a CTD:179171
WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 54/207 (26%), Positives = 87/207 (42%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L HL+ LD+S N+L LP I ++ L ELNL+ N + LP +CK LT L L N
Sbjct: 58 LRHLRILDVSDNELAV--LPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN 115
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXX 119
+ + ++ + SN+G L NL +L+ DN L +P
Sbjct: 116 PFTRLP-ETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELR 174
Query: 120 XXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
G N ++ + +I + + ++ + L ++ G M Q SE I +
Sbjct: 175 KLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIR 234
Query: 180 Y--KLDRTKTLT-----LCKVINIPES 199
L R LT + ++I +P S
Sbjct: 235 LPENLGRMPNLTDLNISINEIIELPSS 261
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/243 (23%), Positives = 108/243 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+N L S LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++T V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVNTLDWI 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYH-CQNVDGGGMSSQESTSEINI 177
GN I+ + + + + H+K+ +LD + +D + S +S + I++
Sbjct: 256 WQLEKLDLSGNEIEYIEPHVFES----VPHLKSLQLDSNRLTYIDSRILDSWKSLTSISL 311
Query: 178 DKYKLDRTKTLTLCKVINIPESVYMRGMSSQEC-TIEINIDKYKLDRTKTLTLCKVINIP 236
D + + C + + S R S+ C T E + LD LC+ P
Sbjct: 312 SANTWDCGRNV--CALASWLSSFKGRYDSNLLCATPEYAQGEDVLDAVYAFHLCEDTVDP 369
Query: 237 ESV 239
SV
Sbjct: 370 TSV 372
>FB|FBgn0028487 [details] [associations]
symbol:f-cup "flyers-cup" species:7227 "Drosophila
melanogaster" [GO:0007265 "Ras protein signal transduction"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014297 InterPro:IPR025875 Pfam:PF12799 HSSP:P07359
GeneTree:ENSGT00700000104287 UniGene:Dm.7643 GeneID:41677
KEGG:dme:Dmel_CG9611 CTD:41677 FlyBase:FBgn0028487 GenomeRNAi:41677
NextBio:825009 RefSeq:NP_731852.2 ProteinModelPortal:Q9V3X1
SMR:Q9V3X1 EnsemblMetazoa:FBtr0082846 UCSC:CG9611-RA
InParanoid:Q9V3X1 OMA:HERSTHE PhylomeDB:Q9V3X1 ArrayExpress:Q9V3X1
Bgee:Q9V3X1 Uniprot:Q9V3X1
Length = 693
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 48/179 (26%), Positives = 78/179 (43%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDM-RSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
L+ +DL HN L S LP + + R L L L +N + LP + L L N I
Sbjct: 296 LQKIDLMHNDLTS--LPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNELHASNNFIKI 353
Query: 64 MENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXX 123
+ I+E+ + L NL LD+S+N ++ +P
Sbjct: 354 IPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLIS 413
Query: 124 XXXGGNPIKTVRNDILQ-DSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYK 181
GNPIKT+R DILQ + RI+ + R + +GGG+ +++ I++ + +
Sbjct: 414 LQVEGNPIKTIRRDILQCGTTRILKTLH-DRAVAKAKE-EGGGVDDASTSAGISVTRLR 470
Score = 51 (23.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 202 MRGMSSQECTIEINI-DKYKLDRTKTLT--LCKVINIPESVY 240
+RG + I N D+YKL T+TL L ++ ++P+ V+
Sbjct: 469 LRGGQMDDGDIPGNFPDRYKLRHTRTLAVNLEELTSVPDQVF 510
Score = 49 (22.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 163 GGGMSSQESTSEINIDKYKLDRTKTLT--LCKVINIPESVY 201
GG M + D+YKL T+TL L ++ ++P+ V+
Sbjct: 471 GGQMDDGDIPGNFP-DRYKLRHTRTLAVNLEELTSVPDQVF 510
>TAIR|locus:2120825 [details] [associations]
symbol:PIRL8 "AT4G26050" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG4886 HSSP:P17778 HOGENOM:HOG000241007
ProtClustDB:CLSN2683169 EMBL:AY093142 EMBL:BT008469 IPI:IPI00517392
RefSeq:NP_194335.2 UniGene:At.43405 ProteinModelPortal:Q8RWE5
SMR:Q8RWE5 STRING:Q8RWE5 EnsemblPlants:AT4G26050.1 GeneID:828711
KEGG:ath:AT4G26050 TAIR:At4g26050 InParanoid:Q8RWE5 OMA:ELGACTQ
PhylomeDB:Q8RWE5 Genevestigator:Q8RWE5 Uniprot:Q8RWE5
Length = 383
Score = 132 (51.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/192 (30%), Positives = 87/192 (45%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGF 58
LS LK L++S N L SLP I D RSL ELN ++N+LT LP + + NLT L +
Sbjct: 126 LSKLKFLNVSGNYL--QSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTNLTKLSVNS 183
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDN--ELTDVPCEXX 116
NK+ + N +S + ++ +L+NL +L++S N LT +P
Sbjct: 184 NKLVLLPNSV-SYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNFQHLTTLPYSVG 242
Query: 117 XXXXXXXXXXGGNPIKTVRNDILQDSKRI--ISHIKTSRLDYHCQNVDGGGMSSQESTSE 174
N I TV D L +RI +S + + V+ G + ++ SE
Sbjct: 243 LLISLVELDVSYNGI-TVLPDSLGCLRRIQKLSVEGNPLISPPFEVVEQGLEALKQYMSE 301
Query: 175 INIDKYKLDRTK 186
+ YK TK
Sbjct: 302 KMTESYKKTPTK 313
>ZFIN|ZDB-GENE-040718-372 [details] [associations]
symbol:lrrc57 "leucine rich repeat containing 57"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040718-372
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116557
GeneTree:ENSGT00700000104417 EMBL:BC075955 IPI:IPI00511290
RefSeq:NP_001002627.1 UniGene:Dr.84455 ProteinModelPortal:Q6DHL5
STRING:Q6DHL5 PRIDE:Q6DHL5 Ensembl:ENSDART00000064515
Ensembl:ENSDART00000114270 GeneID:436900 KEGG:dre:436900 CTD:255252
HOVERGEN:HBG054710 InParanoid:Q6DHL5 OMA:ERYTATK OrthoDB:EOG4F1X40
NextBio:20831327 Bgee:Q6DHL5 Uniprot:Q6DHL5
Length = 238
Score = 127 (49.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGF 58
+ ++L+T+DLS+NK+ + LP FI + L +S N+LT LP K L L+L
Sbjct: 36 LTANLRTVDLSNNKI--EELPAFIGSFQHLKSFTISCNKLTSLPNDIGKLKKLETLILNG 93
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXX 118
N++ + + E S +G L L +LDLS N++ VP E
Sbjct: 94 NQLKQLPSS-IGQLKSLRTLSLSGNQFKEFPSGLGTLRQLDVLDLSKNQIRVVPAEVAEL 152
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHC 158
N I +V ++ + + +K RL+ +C
Sbjct: 153 QAIEINL-NQNQISSVTQEVSRTPR-----LKVLRLEENC 186
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
L +L+ LDLS+N+L S LF +R LT L+L YN L +PV DC+++ L LG+N
Sbjct: 138 LPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYN 197
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDV 111
++ ++ + F + +V+ ++ LI+L L + +N+ T V
Sbjct: 198 QLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIV 250
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 40/115 (34%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
LS L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 124 LSGLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFN 181
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 182 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 235
>UNIPROTKB|E2R416 [details] [associations]
symbol:LUM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005583 "fibrillar
collagen" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0045944 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 CTD:4060 KO:K08122 OMA:LHINYNN
PANTHER:PTHR24371:SF1 EMBL:AAEX03009927 RefSeq:XP_539716.1
ProteinModelPortal:E2R416 Ensembl:ENSCAFT00000009934 GeneID:482599
KEGG:cfa:482599 NextBio:20857166 Uniprot:E2R416
Length = 338
Score = 128 (50.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L D++ F ++SL L+LSYNQ+ LP LT L L NK
Sbjct: 158 LVNLTFVHLQHNQLKEDTVSAAFKGLKSLEYLDLSYNQMAKLPSGLPASLLT-LYLDNNK 216
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ V N ++ +L LDLS N+L ++P
Sbjct: 217 ISNIPDEYFKRFNGLQYLRLSHNELADSGVPGNSFNVSSLLELDLSYNKLKNIP 270
>UNIPROTKB|F1SQ09 [details] [associations]
symbol:LUM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0045944 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0005583 GeneTree:ENSGT00600000084286 CTD:4060
KO:K08122 OMA:LHINYNN PANTHER:PTHR24371:SF1 EMBL:CU467909
RefSeq:NP_001230268.1 UniGene:Ssc.1128 Ensembl:ENSSSCT00000001000
GeneID:100152607 KEGG:ssc:100152607 Uniprot:F1SQ09
Length = 341
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L D++ F ++ L L+LS+NQ+T LP LT L L NK
Sbjct: 161 LVNLTFIHLQHNQLKEDAVSAAFRGLKGLEYLDLSFNQMTKLPSGLPVSLLT-LYLDNNK 219
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ + N +L +L LDLS N+L ++P
Sbjct: 220 ISNIPDEYFKHFSGLQYLRLSHNELADSGIPGNSFNLSSLLELDLSYNKLKNIP 273
>UNIPROTKB|P51890 [details] [associations]
symbol:LUM "Lumican" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 GO:GO:0005615 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:M80584 IPI:IPI00592361 PIR:A41748
RefSeq:XP_416135.1 UniGene:Gga.4078 ProteinModelPortal:P51890
PRIDE:P51890 Ensembl:ENSGALT00000018392 GeneID:417891
KEGG:gga:417891 InParanoid:P51890 NextBio:20821127 Uniprot:P51890
Length = 343
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLP-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L +N+L +DS+ F + SL L+LS+NQLT LP +L L N+
Sbjct: 163 LVNLTVIHLQNNQLKTDSISGAFKGLNSLLYLDLSFNQLTKLPTGLP-HSLLMLYFDNNQ 221
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ + NV ++ +L LDLS N+L +P
Sbjct: 222 ISNIPDEYFQGFKTLQYLRLSHNKLTDSGIPGNVFNITSLVELDLSFNQLKSIP 275
>UNIPROTKB|E1BWI3 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 GO:GO:0007265 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095190 EMBL:AADN02000655 IPI:IPI00819606
Ensembl:ENSGALT00000014189 ArrayExpress:E1BWI3 Uniprot:E1BWI3
Length = 204
Score = 122 (48.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 45/157 (28%), Positives = 71/157 (45%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LSH+ L LSHNKL + +P I D+R++ LN NQ+ LP + + L HL LG N
Sbjct: 39 LSHITQLVLSHNKLTT--VPANIADLRNIEVLNFFNNQIEELPTQISSLQKLKHLNLGMN 96
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXX 117
++N + F ++E S N L L L LSDN+ +P +
Sbjct: 97 RLNTLPRG-FGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGK 155
Query: 118 XXXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>ZFIN|ZDB-GENE-080327-24 [details] [associations]
symbol:prelp "proline/arginine-rich end leucine-rich
repeat protein" species:7955 "Danio rerio" [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-24 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 EMBL:CU459075 IPI:IPI00864506
RefSeq:XP_001923590.1 UniGene:Dr.134237 ProteinModelPortal:F1QY29
Ensembl:ENSDART00000103846 GeneID:100144408 KEGG:dre:100144408
NextBio:20791438 Bgee:F1QY29 Uniprot:F1QY29
Length = 378
Score = 128 (50.1 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
+ HL LDL HN++ S+ +F D+++L +LNL++N L +P L L L N
Sbjct: 196 MEHLALLDLHHNRISDSSMGKNIFKDLKNLIQLNLAHNILRKMPANIP-NTLFQLFLDRN 254
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I + DYF IS+ + +V ++ +L L L+ N+L++VP
Sbjct: 255 NIEEIPQDYFKNFASLAFVRLNYNQISDKGLPKSVFNVSSLLDLHLAHNKLSNVP 309
>UNIPROTKB|Q05443 [details] [associations]
symbol:LUM "Lumican" species:9913 "Bos taurus" [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0005583 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:L11063 EMBL:BC102271
IPI:IPI00716158 PIR:A46743 RefSeq:NP_776359.1 UniGene:Bt.2452
ProteinModelPortal:Q05443 STRING:Q05443 PRIDE:Q05443
Ensembl:ENSBTAT00000002279 GeneID:280847 KEGG:bta:280847 CTD:4060
InParanoid:Q05443 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
NextBio:20804995 PMAP-CutDB:Q05443 PANTHER:PTHR24371:SF1
Uniprot:Q05443
Length = 342
Score = 127 (49.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L D++ + ++SL L+LS+NQ+T LP LT L L NK
Sbjct: 162 LVNLTFIHLQHNQLKEDAVSAALKGLKSLEYLDLSFNQMTKLPSGLPVSLLT-LYLDNNK 220
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ V N ++ +L LDLS N+L +P
Sbjct: 221 ISNIPDEYFKRFSALQYLRLSHNELADSGVPGNSFNVSSLLELDLSYNKLKSIP 274
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|P51884 [details] [associations]
symbol:LUM "Lumican" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0014070 "response
to organic cyclic compound" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=NAS]
[GO:0005583 "fibrillar collagen" evidence=IDA] [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=NAS;TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=NAS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0042339 "keratan sulfate metabolic process" evidence=TAS]
[GO:0042340 "keratan sulfate catabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 Reactome:REACT_116125
GO:GO:0005615 GO:GO:0005975 GO:GO:0007601 GO:GO:0030199
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471054 GO:GO:0014070 GO:GO:0005518 GO:GO:0051216
GO:GO:0043202 GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0018146 GO:GO:0042340
GO:GO:0005201 GO:GO:0005583 HOGENOM:HOG000234447 HOVERGEN:HBG108061
CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:U18728 EMBL:U21128 EMBL:BT006707
EMBL:AK312682 EMBL:BC007038 EMBL:BC035997 IPI:IPI00020986
RefSeq:NP_002336.1 UniGene:Hs.406475 ProteinModelPortal:P51884
SMR:P51884 IntAct:P51884 MINT:MINT-1422554 STRING:P51884
PhosphoSite:P51884 DMDM:20141464 PaxDb:P51884 PeptideAtlas:P51884
PRIDE:P51884 DNASU:4060 Ensembl:ENST00000266718 GeneID:4060
KEGG:hsa:4060 UCSC:uc001tbm.3 GeneCards:GC12M091430 HGNC:HGNC:6724
HPA:CAB022193 HPA:HPA001522 MIM:600616 neXtProt:NX_P51884
PharmGKB:PA30486 InParanoid:P51884 PhylomeDB:P51884 ChiTaRS:LUM
GenomeRNAi:4060 NextBio:15912 PMAP-CutDB:P51884 Bgee:P51884
CleanEx:HS_LUM Genevestigator:P51884 GermOnline:ENSG00000139329
Uniprot:P51884
Length = 338
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLPL-FIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L D++ F ++SL L+LS+NQ+ LP LT L L NK
Sbjct: 158 LVNLTFIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLPSGLPVSLLT-LYLDNNK 216
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ + N ++ +L LDLS N+L ++P
Sbjct: 217 ISNIPDEYFKRFNALQYLRLSHNELADSGIPGNSFNVSSLVELDLSYNKLKNIP 270
>DICTYBASE|DDB_G0282725 [details] [associations]
symbol:vilD "villin-like protein D" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003128
InterPro:IPR007122 Pfam:PF02209 PRINTS:PR00597 PROSITE:PS51089
PROSITE:PS51450 SMART:SM00262 dictyBase:DDB_G0282725 GO:GO:0007010
EMBL:AAFI02000047 GenomeReviews:CM000152_GR eggNOG:COG4886
Gene3D:1.10.950.10 SUPFAM:SSF47050 KO:K05768 InterPro:IPR007123
PANTHER:PTHR11977 Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
RefSeq:XP_640228.1 ProteinModelPortal:Q54S11
EnsemblProtists:DDB0232145 GeneID:8623768 KEGG:ddi:DDB_G0282725
InParanoid:Q54S11 OMA:STYKHTF Uniprot:Q54S11
Length = 1775
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +LK L+LS NK+ L ++ L +L++SYN ++++ CK L L L FN+
Sbjct: 43 LLNLKFLNLSRNKITR--LDGISNILKLEDLDVSYNAISIISDDLYQCKLLEKLNLSFNQ 100
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXX 120
INN+++ + +S++ + +G L NL L+LS N+L +P
Sbjct: 101 INNIQSSFIAQLKLLKVLNLSNNLLSQLPNEIGFLNNLTTLNLSFNKLQQLPKTIGRLSS 160
Query: 121 XXXXXXGGNPIKTVRNDI 138
N ++ + N+I
Sbjct: 161 LQKLIINNNCLQLLPNEI 178
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|E1C7T4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AADN02066901
IPI:IPI00587003 RefSeq:XP_418054.2 PRIDE:E1C7T4
Ensembl:ENSGALT00000005617 GeneID:419933 KEGG:gga:419933
NextBio:20822920 Uniprot:E1C7T4
Length = 374
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSL---PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HNKL SD + F +++L +LNL++N L +P + L L
Sbjct: 185 LENLVLLDLHHNKL-SDGVFNKNTFKGLKNLMQLNLAHNILRKMPPGVPSA-IHQLFLDR 242
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
N I ++ +DYF IS+ + N +L NL +L L+ N+LT+VP
Sbjct: 243 NNIEDIPSDYFKEFPNLAFIRLNYNQISDKGLPKNSFNLTNLLVLHLAHNKLTNVP 298
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
+L++L L+ K+ S + L + + L L+LSYN + LP T C++L + L N+I+
Sbjct: 403 NLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQHNQIHE 462
Query: 64 MENDYFXXXXXXXXXXXXXXXI----SEVSSNVGDLINLAILDLSDNELTDVPCE 114
+ +D F I E + +G ++NL DLS NELT VP E
Sbjct: 463 ITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNL---DLSFNELTSVPTE 514
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL L+ N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALNENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>UNIPROTKB|E1BS02 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 GO:GO:0007265 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095190 CTD:6251 OMA:MSNITRL EMBL:AADN02000655
IPI:IPI00601204 RefSeq:NP_001186520.1 UniGene:Gga.34554
ProteinModelPortal:E1BS02 Ensembl:ENSGALT00000038283 GeneID:420524
KEGG:gga:420524 NextBio:20823420 ArrayExpress:E1BS02 Uniprot:E1BS02
Length = 277
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/157 (28%), Positives = 71/157 (45%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFN 59
LSH+ L LSHNKL + +P I D+R++ LN NQ+ LP + + L HL LG N
Sbjct: 39 LSHITQLVLSHNKLTT--VPANIADLRNIEVLNFFNNQIEELPTQISSLQKLKHLNLGMN 96
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXX 117
++N + F ++E S N L L L LSDN+ +P +
Sbjct: 97 RLNTLPRG-FGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGK 155
Query: 118 XXXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>MGI|MGI:109347 [details] [associations]
symbol:Lum "lumican" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO;IDA] [GO:0005583 "fibrillar collagen" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR001611 InterPro:IPR027219
PROSITE:PS51450 MGI:MGI:109347 GO:GO:0005615 GO:GO:0005578
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0014070 GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:S79461 EMBL:AF013262 EMBL:AK014312
EMBL:AK075737 EMBL:AK164774 EMBL:BC005550 IPI:IPI00313900
RefSeq:NP_032550.2 UniGene:Mm.18888 ProteinModelPortal:P51885
SMR:P51885 STRING:P51885 PhosphoSite:P51885 PaxDb:P51885
PRIDE:P51885 Ensembl:ENSMUST00000038160 GeneID:17022 KEGG:mmu:17022
UCSC:uc007gwz.2 InParanoid:P51885 NextBio:291134 Bgee:P51885
CleanEx:MM_LUM Genevestigator:P51885 GermOnline:ENSMUSG00000036446
Uniprot:P51885
Length = 338
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L D++ + ++SL L+LS+NQ++ LP LT L L NK
Sbjct: 158 LVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLSFNQMSKLPAGLPTSLLT-LYLDNNK 216
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I+N+ ++YF +++ V N ++ +L LDLS N+L +P
Sbjct: 217 ISNIPDEYFKRFTGLQYLRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIP 270
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 145 LVNLMTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITAVEKDV-RNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
>DICTYBASE|DDB_G0278445 [details] [associations]
symbol:mpl3 "putative protein tyrosine phosphatase,
dual specificity" species:44689 "Dictyostelium discoideum"
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA]
[GO:0016791 "phosphatase activity" evidence=IEA] [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0008138 "protein
tyrosine/serine/threonine phosphatase activity" evidence=IEA;IBA]
[GO:0006470 "protein dephosphorylation" evidence=IEA;IBA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000340 InterPro:IPR000387 InterPro:IPR016130
InterPro:IPR020422 InterPro:IPR024950 Pfam:PF00782 PROSITE:PS00383
PROSITE:PS50054 PROSITE:PS50056 PROSITE:PS51450 SMART:SM00195
dictyBase:DDB_G0278445 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0004725
GO:GO:0035335 GO:GO:0008138 PANTHER:PTHR10159 HSSP:Q05923
RefSeq:XP_642370.1 ProteinModelPortal:Q54Y32
EnsemblProtists:DDB0238874 GeneID:8621575 KEGG:ddi:DDB_G0278445
OMA:DSANNAP Uniprot:Q54Y32
Length = 856
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 54/224 (24%), Positives = 91/224 (40%)
Query: 1 MLSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGFN 59
++ L T++L+ NKL +FI++ SLT L L N ++ +P D KNL +L + N
Sbjct: 389 LVKSLTTVNLTRNKLSKLQTSVFIELPSLTSLILDRNFISSIPDDIDQIKNLKYLSIKHN 448
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXX 119
+ + N + + N DLINL ++ LS N++T +P
Sbjct: 449 ALEYLPNS-LSNLSQLISLDLSQNKLKTLPPNFDDLINLRMVWLSYNQITSLP-SMRKLV 506
Query: 120 XXXXXXXGGNPIKTVRNDI--LQDS--KRIISHIKTSRLDYH---CQNVDGGGMSSQEST 172
N + ++ D L S K+ S I D + C N++ S S
Sbjct: 507 NLVTFDISSNKLLSLPKDFAYLVPSRIKQSYSDIDIDEYDENINTCNNINSNNNDSNNSN 566
Query: 173 SEINIDKYKLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINI 216
+ N + + + ++IN E + G C E+NI
Sbjct: 567 NNNNNNNDNNNNCNKNNILEMINSTE---LEG-GGLGCLKELNI 606
>UNIPROTKB|Q15404 [details] [associations]
symbol:RSU1 "Ras suppressor protein 1" species:9606 "Homo
sapiens" [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005829 GO:GO:0007265 GO:GO:0007165
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 EMBL:CH471072
Reactome:REACT_111155 GO:GO:0034329 InterPro:IPR025875 Pfam:PF12799
EMBL:AL365215 HOGENOM:HOG000116557 CTD:6251 HOVERGEN:HBG002478
OMA:MSNITRL OrthoDB:EOG4HX51M EMBL:L12535 EMBL:AK292911
EMBL:AK312520 EMBL:CR536521 EMBL:CR541840 EMBL:EF445013
EMBL:AC073367 EMBL:BC005993 EMBL:BC008691 EMBL:BC015644
IPI:IPI00017256 PIR:I60122 RefSeq:NP_036557.1 RefSeq:NP_689937.2
UniGene:Hs.524161 ProteinModelPortal:Q15404 SMR:Q15404
IntAct:Q15404 STRING:Q15404 PhosphoSite:Q15404 DMDM:2498866
OGP:Q15404 PaxDb:Q15404 PRIDE:Q15404 DNASU:6251
Ensembl:ENST00000345264 Ensembl:ENST00000377911
Ensembl:ENST00000377921 GeneID:6251 KEGG:hsa:6251 UCSC:uc001iok.3
GeneCards:GC10M016672 HGNC:HGNC:10464 HPA:HPA025927 MIM:179555
neXtProt:NX_Q15404 PharmGKB:PA34876 PhylomeDB:Q15404 ChiTaRS:RSU1
GenomeRNAi:6251 NextBio:24271 ArrayExpress:Q15404 Bgee:Q15404
CleanEx:HS_RSU1 Genevestigator:Q15404 GermOnline:ENSG00000148484
Uniprot:Q15404
Length = 277
Score = 120 (47.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/156 (28%), Positives = 68/156 (43%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LSH+ L LSHNKL P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LSHITQLVLSHNKLTMVP-PNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXXX 118
+N + F +SE S N L L L LSDN+ +P +
Sbjct: 98 LNTLPRG-FGSLPALEVLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKL 156
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 157 TKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>DICTYBASE|DDB_G0294094 [details] [associations]
symbol:lrrA "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031154
"culmination involved in sorocarp development" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030833 "regulation of actin filament
polymerization" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001611
PROSITE:PS51450 dictyBase:DDB_G0294094 GO:GO:0045335 GO:GO:0007163
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0043326
GO:GO:0016337 GO:GO:0031154 InterPro:IPR025875 Pfam:PF12799
GO:GO:0031589 GO:GO:0030833 GO:GO:0031152 GO:GO:0043327
EMBL:AF200466 RefSeq:XP_628849.1 ProteinModelPortal:Q54AX5
EnsemblProtists:DDB0215361 GeneID:8617996 KEGG:ddi:DDB_G0294094
OMA:TIDNIPS ProtClustDB:CLSZ2728674 Uniprot:Q54AX5
Length = 510
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L +LK L LS+N L++ P M++L E S NQL +P + LT + L NK
Sbjct: 340 LVNLKKLLLSNNLLIALP-PEIASMKALKEFEASNNQLQAIPTEIGELSGLTKINLSGNK 398
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXX 120
+ ++ F I+E+ + + L + +DLS N LT++P E
Sbjct: 399 LTSIPAS-FGNLSELQICDLKSNEIAELPTTLDGLKSCTKIDLSHNMLTELPWEFGDLIG 457
Query: 121 XXXXXXGGNPIKTVRNDI-LQDSKRIISHIKTSRLDYHCQNVDGGGM 166
G NP+ N I ++ ++ II +K + + V G G+
Sbjct: 458 LTILDVGHNPLTIPPNPIVMKGTESIIQWLKKNEKEGRKGKVSGLGI 504
>UNIPROTKB|F1S6B4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF15 OMA:NKLEHLY
EMBL:CU466494 Ensembl:ENSSSCT00000016640 Uniprot:F1S6B4
Length = 375
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSL--P-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HNKL SD + P F +++L +LNL++N L +P + L L
Sbjct: 193 LENLLLLDLQHNKL-SDGVFKPDTFQGLKNLMQLNLAHNILRKMPPKVPTA-IHQLYLDS 250
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
NKI + N YF +S+ + N ++ NL +L LS N++++VP
Sbjct: 251 NKIETIPNGYFKGFPNLAFIRLNYNKLSDRGLPKNSFNISNLLVLHLSHNKISNVP 306
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/115 (33%), Positives = 58/115 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEE 256
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 126 (49.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 45/151 (29%), Positives = 64/151 (42%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTML--PVCTDCKNLTHLLLGFN 59
L +L L L N + + F ++ L LNLS N ++ L V +D NLT LLLG N
Sbjct: 83 LPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISFLHRDVFSDLHNLTQLLLGSN 142
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAIL---DLSDNELTDVPCEXX 116
K+ N + F + SS V + NL L DLS N+LT +
Sbjct: 143 KLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVESITNLTSLIKLDLSFNKLTTLQHSTH 202
Query: 117 XXXXXXXXXXGGNPIKTVRND--ILQDSKRI 145
G N +KT+ D L + K++
Sbjct: 203 LPESLALLYLGDNKLKTLGCDKSFLMNVKKL 233
Score = 42 (19.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 192 KVINIPESVYMRGMSSQECTIEINIDKYKL--DRTKTLTLCKVINIPE 237
K I + ++R S+ C++EI + Y+L + L L + IPE
Sbjct: 852 KTICVVSQSFLR---SEWCSLEIQLASYRLFQEMQDVLLLVFLEPIPE 896
>UNIPROTKB|Q5E9C0 [details] [associations]
symbol:RSU1 "Ras suppressor protein 1" species:9913 "Bos
taurus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007265
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00660000095190 EMBL:BT021000 EMBL:BC102118
IPI:IPI00700672 RefSeq:NP_001035691.1 UniGene:Bt.65606
ProteinModelPortal:Q5E9C0 PRIDE:Q5E9C0 Ensembl:ENSBTAT00000039415
GeneID:617534 KEGG:bta:617534 CTD:6251 HOVERGEN:HBG002478
InParanoid:Q5E9C0 OMA:MSNITRL OrthoDB:EOG4HX51M NextBio:20900715
Uniprot:Q5E9C0
Length = 277
Score = 119 (46.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LSH+ L LSHNKL + P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LSHITQLVLSHNKLTTVP-PNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXXX 118
+N + F ++E S N L L L LSDN+ +P +
Sbjct: 98 LNTLPRG-FGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKL 156
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 157 TKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>UNIPROTKB|E2R9R1 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007265 "Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0007265 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GeneTree:ENSGT00660000095190 CTD:6251 OMA:MSNITRL
EMBL:AAEX03001249 EMBL:AAEX03001250 RefSeq:XP_535177.1
ProteinModelPortal:E2R9R1 Ensembl:ENSCAFT00000007396 GeneID:477993
KEGG:cfa:477993 NextBio:20853383 Uniprot:E2R9R1
Length = 277
Score = 119 (46.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
LSH+ L LSHNKL + P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LSHITQLVLSHNKLTTVP-PNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXXX 118
+N + F ++E S N L L L LSDN+ +P +
Sbjct: 98 LNTLPRG-FGSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKL 156
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 157 TKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/115 (33%), Positives = 58/115 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEE 256
>TAIR|locus:2032553 [details] [associations]
symbol:HSL1 "HAESA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000271 "polysaccharide biosynthetic process"
evidence=RCA] [GO:0007020 "microtubule nucleation" evidence=RCA]
[GO:0007389 "pattern specification process" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0009926 "auxin
polar transport" evidence=RCA] [GO:0009932 "cell tip growth"
evidence=RCA] [GO:0010015 "root morphogenesis" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010817 "regulation of hormone levels" evidence=RCA]
[GO:0040007 "growth" evidence=RCA] [GO:0043481 "anthocyanin
accumulation in tissues in response to UV light" evidence=RCA]
[GO:0048653 "anther development" evidence=RCA] [GO:0048767 "root
hair elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 eggNOG:COG4886
KO:K00924 InterPro:IPR025875 Pfam:PF12799 HSSP:O43318
HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263 EMBL:AC010155
EMBL:AY093235 EMBL:BT008808 EMBL:AK227198 EMBL:FJ708639
IPI:IPI00545864 PIR:F86410 RefSeq:NP_174166.1 UniGene:At.22589
ProteinModelPortal:Q9SGP2 SMR:Q9SGP2 PaxDb:Q9SGP2 PRIDE:Q9SGP2
EnsemblPlants:AT1G28440.1 GeneID:839742 KEGG:ath:AT1G28440
GeneFarm:660 TAIR:At1g28440 InParanoid:Q9SGP2 OMA:CDRGELE
PhylomeDB:Q9SGP2 ProtClustDB:CLSN2679625 Genevestigator:Q9SGP2
Uniprot:Q9SGP2
Length = 996
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 3 SHLKTLDLSHNKLVSDSLPLFIDMRS-LTELNLSYNQLT-MLPVC-TDCKNLTHLLLGFN 59
S L+ LD+S N+ D LP + + L EL + +N + ++P DC++LT + L +N
Sbjct: 348 SPLRWLDVSENEFSGD-LPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLAYN 406
Query: 60 KIN-NMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELT-DVPCEXXX 117
+ + ++ ++ E+S ++G NL++L LS+NE T +P E
Sbjct: 407 RFSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGASNLSLLILSNNEFTGSLPEEIGS 466
Query: 118 XXXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDG---GGMSSQESTSE 174
GN + L DS + + T LD H G G+ S + +E
Sbjct: 467 LDNLNQLSASGNKF----SGSLPDSLMSLGELGT--LDLHGNQFSGELTSGIKSWKKLNE 520
Query: 175 INI 177
+N+
Sbjct: 521 LNL 523
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/115 (33%), Positives = 58/115 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L TL LS N L S LP +D ++ L L+L +N+L +P V +L L L FN
Sbjct: 145 LVNLVTLALSENSLTS--LPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFN 202
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I ++ + +G+L NL LD++ N+L +P E
Sbjct: 203 RITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEE 256
>MGI|MGI:1915557 [details] [associations]
symbol:Lrriq4 "leucine-rich repeats and IQ motif containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000048 PROSITE:PS50096
PROSITE:PS51450 SMART:SM00015 MGI:MGI:1915557 eggNOG:COG4886
GeneTree:ENSGT00700000104287 EMBL:AK015024 EMBL:BC145806
IPI:IPI00134786 IPI:IPI00831402 RefSeq:NP_080944.2
UniGene:Mm.389425 ProteinModelPortal:A6H6A4 SMR:A6H6A4 PRIDE:A6H6A4
Ensembl:ENSMUST00000108265 Ensembl:ENSMUST00000108267
Ensembl:ENSMUST00000172350 GeneID:68307 KEGG:mmu:68307
UCSC:uc008ovc.1 UCSC:uc008ovd.1 CTD:344657 HOGENOM:HOG000113384
HOVERGEN:HBG076273 InParanoid:A6H6A4 OMA:CAEGNEA OrthoDB:EOG49P9Z8
NextBio:326967 Bgee:A6H6A4 Genevestigator:A6H6A4 Uniprot:A6H6A4
Length = 596
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHL-LLGFNK 60
LS L++LDLS N LV SL + +R+L EL L LT +P CK+L HL L G ++
Sbjct: 129 LSSLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGI-CKSLHHLELFGLSE 187
Query: 61 INNMEN--DYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXX 118
N +E+ + ++ L NL ++DL +N+L +P +
Sbjct: 188 -NFLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHL 246
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINID 178
N + ++ + Q SK +S + + H + +E+ +
Sbjct: 247 VRLQKFYVASNHLMSLPESLSQCSK--LSVLDLTHNSIHSLP---SSLELLTELTEVGLS 301
Query: 179 KYKLDRTKTLTLCKVINIPESVYMRGMS 206
+L++ L LC +++ +Y+R S
Sbjct: 302 GNRLEKVPRL-LCSWVSL-HLLYLRNTS 327
>UNIPROTKB|E2RL80 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007569 "cell aging" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0007569 GeneTree:ENSGT00600000084286 CTD:5549
KO:K08125 PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AAEX03018218
RefSeq:XP_545678.2 ProteinModelPortal:E2RL80
Ensembl:ENSCAFT00000015041 GeneID:488561 KEGG:cfa:488561
NextBio:20861888 Uniprot:E2RL80
Length = 379
Score = 120 (47.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 38/116 (32%), Positives = 57/116 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSL--P-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L L LDL HNKL SD + P F +++L +LNL++N L +P + L L
Sbjct: 191 LDSLLLLDLQHNKL-SDGVFKPDTFQGLKNLMQLNLAHNILRKMPPKVPAA-IHQLYLDS 248
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
NKI + N YF +S+ + N ++ NL +L LS N+++ VP
Sbjct: 249 NKIETIPNGYFKGFPNLAFIRLNYNRLSDRGLPKNSFNISNLLVLHLSHNKISSVP 304
>MGI|MGI:2151110 [details] [associations]
symbol:Prelp "proline arginine-rich end leucine-rich repeat"
species:10090 "Mus musculus" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0007569 "cell aging" evidence=IDA] [GO:0008201
"heparin binding" evidence=ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027216 PROSITE:PS51450 MGI:MGI:2151110 GO:GO:0005578
eggNOG:COG4886 GO:GO:0008201 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0007569 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:5549 KO:K08125
OrthoDB:EOG44F69H PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AF261888
EMBL:AF261887 EMBL:BC019775 IPI:IPI00122293 RefSeq:NP_473418.3
UniGene:Mm.214514 ProteinModelPortal:Q9JK53 SMR:Q9JK53
STRING:Q9JK53 PhosphoSite:Q9JK53 PaxDb:Q9JK53 PRIDE:Q9JK53
Ensembl:ENSMUST00000048432 GeneID:116847 KEGG:mmu:116847
InParanoid:Q9JK53 NextBio:369194 Bgee:Q9JK53 CleanEx:MM_PRELP
Genevestigator:Q9JK53 GermOnline:ENSMUSG00000041577 Uniprot:Q9JK53
Length = 378
Score = 119 (46.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSL---PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HN+L SD + F +++L +LNL++N L +P + + L L
Sbjct: 190 LENLLLLDLQHNRL-SDGVFKADTFQGLKNLMQLNLAHNILRKMPPKVP-QAIHQLYLDS 247
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
NKI + N YF +S+ + N ++ NL +L LS N++++VP
Sbjct: 248 NKIETIPNGYFKDFPNLAFIRMNYNKLSDRGLPKNSFNISNLLVLHLSHNKISNVP 303
>RGD|620984 [details] [associations]
symbol:Lum "lumican" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005518 "collagen
binding" evidence=IEA;ISO] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISO;IDA] [GO:0005583 "fibrillar collagen"
evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEP] [GO:0070848 "response to growth factor
stimulus" evidence=IEP] [GO:0031012 "extracellular matrix"
evidence=ISO] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
RGD:620984 GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0014070 GO:GO:0051216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0070848
GO:GO:0005583 GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:X84039 EMBL:BC061878 IPI:IPI00206403
PIR:S52284 RefSeq:NP_112312.1 UniGene:Rn.3087
ProteinModelPortal:P51886 STRING:P51886 PRIDE:P51886
Ensembl:ENSRNOT00000006109 GeneID:81682 KEGG:rno:81682
UCSC:RGD:620984 InParanoid:P51886 NextBio:615304
Genevestigator:P51886 GermOnline:ENSRNOG00000004610 Uniprot:P51886
Length = 338
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
L +L + L HN+L +++ + ++SL L+LS+NQ++ LP LT L L NK
Sbjct: 158 LVNLTFIYLQHNQLKEEAVSASLKGLKSLEYLDLSFNQMSKLPAGLPTSLLT-LYLDNNK 216
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
I N+ ++YF +++ V N ++ +L LDLS N+L +P
Sbjct: 217 ITNIPDEYFNRFTGLQYLRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIP 270
>MGI|MGI:103040 [details] [associations]
symbol:Rsu1 "Ras suppressor protein 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0007265
"Ras protein signal transduction" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:103040 GO:GO:0007265
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116557 HOVERGEN:HBG002478
OrthoDB:EOG4HX51M ChiTaRS:RSU1 EMBL:X63039 IPI:IPI00555071
PIR:S25770 UniGene:Mm.905 ProteinModelPortal:Q01730 SMR:Q01730
IntAct:Q01730 STRING:Q01730 PhosphoSite:Q01730 PaxDb:Q01730
PRIDE:Q01730 InParanoid:Q01730 CleanEx:MM_RSU1
Genevestigator:Q01730 GermOnline:ENSMUSG00000026727 Uniprot:Q01730
Length = 277
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+H+ L LSHNKL + P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LAHITQLVLSHNKLTTVP-PNVAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXXX 118
+N + F ++E S N L L L LSDN+ +P +
Sbjct: 98 LNTLPRG-FGSSRLLEVLELTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEILPPDIGKL 156
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 157 TKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>RGD|1591781 [details] [associations]
symbol:Rsu1 "Ras suppressor protein 1" species:10116 "Rattus
norvegicus" [GO:0007265 "Ras protein signal transduction"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1591781 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GeneTree:ENSGT00660000095190 IPI:IPI00782386
Ensembl:ENSRNOT00000057827 UCSC:RGD:1591781 OMA:RDFNERI
ArrayExpress:D4A8F2 Uniprot:D4A8F2
Length = 247
Score = 115 (45.5 bits), Expect = 0.00010, P = 0.00010
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNK 60
L+H+ L LSHNKL + P ++++L LN NQ+ LP + + L HL LG N+
Sbjct: 39 LAHITQLVLSHNKLTTVP-PNVAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNR 97
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVPCEXXXX 118
+N + F ++E S N L L L LSDN+ +P +
Sbjct: 98 LNTLPRG-FGSLPALEVLDLTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEILPPDIGKL 156
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
N + ++ +I + ++ HI+ +RL
Sbjct: 157 TKLQILSLRDNDLISLPKEIGELTQLKELHIQGNRL 192
>UNIPROTKB|F1NDH7 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 IPI:IPI00682643
OMA:LTRVDCS GeneTree:ENSGT00390000016740 EMBL:AADN02059345
ProteinModelPortal:F1NDH7 Ensembl:ENSGALT00000001106 Uniprot:F1NDH7
Length = 371
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 63/257 (24%), Positives = 105/257 (40%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L +LDLS+N + S F +R L L+LS+N L +LP C L + L NK+ +
Sbjct: 88 LVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLD 147
Query: 64 MENDYFXXXXXXX--XXXXXXXXISEVSSNVGDLI-NLAILDLSDNELTDVPCEXXXXXX 120
+ D F +S+++ N I N+ L+LS N LT VP
Sbjct: 148 IALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLNLSGNRLTSVP--NLQGIP 205
Query: 121 XXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKY 180
GNP+ + + K +I H+ S L + + + + +++
Sbjct: 206 LRYLNLDGNPLAKIEKGDFKGLKGLI-HLSLSGL-HDFRELSPYSFKELPALQVLDLSNN 263
Query: 181 KLDRTKTLTLCKVINIPESVYMRGMSSQECTIEINIDKYKLDRTKTLTLCKVIN----IP 236
R+ T + +N + + + G ++ + KY L K++TL K I I
Sbjct: 264 PNLRSLTAEVIFGLNSIQELNLSGTGVS--SLPKTVLKY-LPSLKSITLRKNIQCFKTIK 320
Query: 237 ESVYMNRPFALTYNYVG 253
E Y +R LT +G
Sbjct: 321 EGQY-HRQIGLTKKELG 336
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
>DICTYBASE|DDB_G0291532 [details] [associations]
symbol:DDB_G0291532 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 dictyBase:DDB_G0291532
EMBL:AAFI02000177 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
RefSeq:XP_635280.1 ProteinModelPortal:Q54EG0
EnsemblProtists:DDB0183955 GeneID:8628224 KEGG:ddi:DDB_G0291532
InParanoid:Q54EG0 OMA:CIVDISP ProtClustDB:CLSZ2728757
Uniprot:Q54EG0
Length = 285
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 5 LKTLDLSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKIN 62
LK L+LS N L LP I ++++LT LNL N L LP T NL + L NK+
Sbjct: 40 LKKLNLSKNNL--KRLPPAIGNLKNLTLLNLFNNSLRELPHEITQLVNLESMNLSINKLK 97
Query: 63 NMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXX 122
+ F I+E+++ +G + L L +S NELT++P E
Sbjct: 98 ALPRG-FGSFNHLFFLDVSYNSITELTTQIGLISTLKELHISFNELTELPVELSRCSELE 156
Query: 123 XXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDY 156
N I + ++ + K + +I ++L +
Sbjct: 157 VINASHNKILELPSEFSKLPKLKLLNITGNKLSF 190
>UNIPROTKB|Q8AVI4 [details] [associations]
symbol:shoc2 "Leucine-rich repeat protein SHOC-2"
species:8355 "Xenopus laevis" [GO:0000164 "protein phosphatase type
1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359 CTD:8036
PANTHER:PTHR23155:SF38 EMBL:BC042263 RefSeq:NP_001080350.1
UniGene:Xl.21982 ProteinModelPortal:Q8AVI4 GeneID:380042
KEGG:xla:380042 Xenbase:XB-GENE-493506 Uniprot:Q8AVI4
Length = 577
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFN 59
L +L L LS N L S LP +D ++ L L+L +N+L +P V +LT L L FN
Sbjct: 140 LVNLVKLALSENSLTS--LPDSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFN 197
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCE 114
+I +E D I + + +G+L NL LD++ N+L +P E
Sbjct: 198 RITAVEKD-LKMLPKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKE 251
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTY 294
>MGI|MGI:1913856 [details] [associations]
symbol:Lrrc57 "leucine rich repeat containing 57"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913856 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 HOGENOM:HOG000116557
HOVERGEN:HBG054710 OrthoDB:EOG4F1X40 EMBL:AK003037 EMBL:AK003592
IPI:IPI00623216 UniGene:Mm.428639 ProteinModelPortal:Q9D1G5
SMR:Q9D1G5 PhosphoSite:Q9D1G5 PaxDb:Q9D1G5 PRIDE:Q9D1G5
InParanoid:Q9D1G5 ChiTaRS:LRRC57 CleanEx:MM_LRRC57
Genevestigator:Q9D1G5 GermOnline:ENSMUSG00000027286 Uniprot:Q9D1G5
Length = 239
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 36/116 (31%), Positives = 62/116 (53%)
Query: 1 MLSHLKTLDLSHNKLVSDSLP-LFIDMRSLTE-LNLSYNQLTMLP--VCTDCKNLTHLLL 56
+ S+L+T+DLS+NK+ DSLP L I +L + L+L+ N+LT+LP +C + K L L L
Sbjct: 36 LTSNLRTIDLSNNKI--DSLPPLIIGKFTLLKSLSLNNNKLTVLPDELC-NLKKLETLSL 92
Query: 57 GFNKINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVP 112
N + + + F + + + L +L ++DLS N++ +P
Sbjct: 93 NNNHLRELPST-FGQLSALKTLSLSGNQLGALPPQLCCLRHLDVVDLSKNQIRSIP 147
>UNIPROTKB|Q9BTT6 [details] [associations]
symbol:LRRC1 "Leucine-rich repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 EMBL:CH471081
GO:GO:0016020 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 EMBL:AF359380 EMBL:AF332199 EMBL:AK021896
EMBL:AK001637 EMBL:AL513211 EMBL:AL033384 EMBL:BC003193
IPI:IPI00427739 IPI:IPI00427741 RefSeq:NP_060684.4
UniGene:Hs.646997 UniGene:Hs.732252 ProteinModelPortal:Q9BTT6
SMR:Q9BTT6 IntAct:Q9BTT6 MINT:MINT-1423850 STRING:Q9BTT6
PhosphoSite:Q9BTT6 DMDM:50401149 PaxDb:Q9BTT6 PeptideAtlas:Q9BTT6
PRIDE:Q9BTT6 DNASU:55227 Ensembl:ENST00000370888
Ensembl:ENST00000487251 GeneID:55227 KEGG:hsa:55227 UCSC:uc003pcd.1
CTD:55227 GeneCards:GC06P053706 HGNC:HGNC:14307 HPA:HPA031602
HPA:HPA031603 HPA:HPA031604 MIM:608195 neXtProt:NX_Q9BTT6
PharmGKB:PA30460 HOVERGEN:HBG052357 InParanoid:Q9BTT6 OMA:FQTDTDH
OrthoDB:EOG498V0J PhylomeDB:Q9BTT6 GenomeRNAi:55227 NextBio:59224
ArrayExpress:Q9BTT6 Bgee:Q9BTT6 CleanEx:HS_LRRC1
Genevestigator:Q9BTT6 GermOnline:ENSG00000137269 Uniprot:Q9BTT6
Length = 524
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 43/147 (29%), Positives = 64/147 (43%)
Query: 10 LSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEND 67
LS N + SLP I ++ +L L L N LT LP T + L L LG N+I N+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192
Query: 68 YFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXXXG 127
+SE+ +G+L NL LD+S+N L +P E
Sbjct: 193 -IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVIS 251
Query: 128 GNPIKTVRNDILQDSKRIISHIKTSRL 154
N ++T+ + I + K I + +RL
Sbjct: 252 QNLLETIPDGIGKLKKLSILKVDQNRL 278
>UNIPROTKB|P51888 [details] [associations]
symbol:PRELP "Prolargin" species:9606 "Homo sapiens"
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0018146 "keratan
sulfate biosynthetic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0042339
"keratan sulfate metabolic process" evidence=TAS] [GO:0042340
"keratan sulfate catabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Pfam:PF00560 Reactome:REACT_111217
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
Reactome:REACT_116125 GO:GO:0005975 GO:GO:0005578 eggNOG:COG4886
GO:GO:0008201 EMBL:CH471067 GO:GO:0001501 GO:GO:0043202
GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0018146 GO:GO:0007569 GO:GO:0042340 GO:GO:0005201
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:AL391817 CTD:5549
KO:K08125 OrthoDB:EOG44F69H PANTHER:PTHR24371:SF15 EMBL:U29089
EMBL:U41344 EMBL:U41343 EMBL:CR542270 EMBL:BC032498 IPI:IPI00020987
PIR:I39068 RefSeq:NP_002716.1 RefSeq:NP_958505.1 UniGene:Hs.632481
ProteinModelPortal:P51888 SMR:P51888 IntAct:P51888 STRING:P51888
PhosphoSite:P51888 DMDM:1709586 PaxDb:P51888 PeptideAtlas:P51888
PRIDE:P51888 DNASU:5549 Ensembl:ENST00000343110 GeneID:5549
KEGG:hsa:5549 UCSC:uc001gzs.3 GeneCards:GC01P203444 HGNC:HGNC:9357
MIM:601914 neXtProt:NX_P51888 PharmGKB:PA33729 InParanoid:P51888
OMA:NKLEHLY ChiTaRS:PRELP GenomeRNAi:5549 NextBio:21502
PMAP-CutDB:P51888 ArrayExpress:P51888 Bgee:P51888 CleanEx:HS_PRELP
Genevestigator:P51888 GermOnline:ENSG00000188783 Uniprot:P51888
Length = 382
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSL--P-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HN+L SD + P F +++L +LNL++N L +P + L L
Sbjct: 194 LENLLLLDLQHNRL-SDGVFKPDTFHGLKNLMQLNLAHNILRKMPPRVPTA-IHQLYLDS 251
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
NKI + N YF +++ + N ++ NL +L LS N ++ VP
Sbjct: 252 NKIETIPNGYFKSFPNLAFIRLNYNKLTDRGLPKNSFNISNLLVLHLSHNRISSVP 307
>FB|FBgn0000709 [details] [associations]
symbol:fliI "flightless I" species:7227 "Drosophila
melanogaster" [GO:0007629 "flight behavior" evidence=IMP]
[GO:0010004 "gastrulation involving germ band extension"
evidence=IMP] [GO:0003779 "actin binding" evidence=ISS;NAS]
[GO:0005509 "calcium ion binding" evidence=ISS;NAS] [GO:0030239
"myofibril assembly" evidence=IMP] [GO:0007527 "adult somatic
muscle development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007122 PRINTS:PR00597 PROSITE:PS51450 SMART:SM00262
GO:GO:0003779 GO:GO:0007527 EMBL:AE014298 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030239 GO:GO:0007629
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010004 EMBL:AF017777
GeneTree:ENSGT00660000095502 OMA:MEEWNED EMBL:U01182 EMBL:AF132184
PIR:S60461 RefSeq:NP_525097.1 UniGene:Dm.1666
ProteinModelPortal:Q24020 SMR:Q24020 IntAct:Q24020 STRING:Q24020
PaxDb:Q24020 PRIDE:Q24020 EnsemblMetazoa:FBtr0077192 GeneID:33110
KEGG:dme:Dmel_CG1484 CTD:2314 FlyBase:FBgn0000709
HOGENOM:HOG000263916 InParanoid:Q24020 OrthoDB:EOG4DR7T5
GenomeRNAi:33110 NextBio:781957 Bgee:Q24020 GermOnline:CG1484
Uniprot:Q24020
Length = 1256
Score = 123 (48.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 38/110 (34%), Positives = 54/110 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTD-CKNLTHLLLGF 58
LS L++LDL HN+L + +P LF + LT L+LS+N+L +P + KNL L L
Sbjct: 74 LSCLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLSN 132
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNEL 108
N+I ++ F + + LINL LDLS N L
Sbjct: 133 NQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHNPL 182
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 212 IEINIDKYKLDRTKTLTLCKVINIPESVYMNRPFALTYNYVG 253
I+IN D L+ T C ++++P + + Y ++G
Sbjct: 1056 IQINPDAVHLNST----FCYILHVPFETEDDSQSGIVYVWIG 1093
>UNIPROTKB|Q65Z91 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0021540
"corpus callosum morphogenesis" evidence=IEA] [GO:0021670 "lateral
ventricle development" evidence=IEA] [GO:0021960 "anterior
commissure morphogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007275 GO:GO:0005576
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:AB100033 EMBL:AB195969 IPI:IPI00682643
IPI:IPI00775744 RefSeq:NP_001005346.1 UniGene:Gga.43824
ProteinModelPortal:Q65Z91 STRING:Q65Z91 GeneID:419088
KEGG:gga:419088 CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643
InParanoid:Q65Z91 KO:K08130 OrthoDB:EOG4V171F NextBio:20822199
Uniprot:Q65Z91
Length = 369
Score = 114 (45.2 bits), Expect = 0.00032, P = 0.00032
Identities = 44/154 (28%), Positives = 66/154 (42%)
Query: 5 LKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINN 63
L +LDLS+N + S F +R L L+LS+N L +LP C L + L NK+ +
Sbjct: 88 LVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLD 147
Query: 64 MENDYFXXXXXXX--XXXXXXXXISEVSSNVGDLI-NLAILDLSDNELTDVPCEXXXXXX 120
+ D F +S+++ N I N+ L+LS N LT VP
Sbjct: 148 IALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLNLSGNRLTSVP--NLQGIP 205
Query: 121 XXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRL 154
GNP+ + + K +I H+ S L
Sbjct: 206 LRYLNLDGNPLAKIEKGDFKGLKGLI-HLSLSGL 238
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIIS-HIKTSRLDY 156
GN I+ + + + + S + ++RL Y
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTY 294
>RGD|621818 [details] [associations]
symbol:Omd "osteomodulin" species:10116 "Rattus norvegicus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030500 "regulation
of bone mineralization" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:621818 GO:GO:0005578
eggNOG:COG4886 GO:GO:0007155 GO:GO:0030500 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
CTD:4958 KO:K08124 OrthoDB:EOG415GDJ EMBL:AF104362 IPI:IPI00209178
RefSeq:NP_114005.1 UniGene:Rn.30124 ProteinModelPortal:Q9Z1S7
STRING:Q9Z1S7 PRIDE:Q9Z1S7 GeneID:83717 KEGG:rno:83717
InParanoid:Q9Z1S7 NextBio:616285 Genevestigator:Q9Z1S7
GermOnline:ENSRNOG00000039560 Uniprot:Q9Z1S7
Length = 423
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 3 SHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNK 60
+HLK ++LSHNK+ S + +F + +L +L+L +N L P K+L LLLG+N+
Sbjct: 115 THLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLDHNNLEEFPFPLP-KSLERLLLGYNE 173
Query: 61 INNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLIN----LAILDLSDNELTDVPCEXX 116
I+ + +S+ S+ G +++ L L+L +N L +P
Sbjct: 174 ISTLPTHAMDGLVNVTMLDLCYNHLSD-STLKGKILSKLEKLMQLNLCNNRLESMP--PG 230
Query: 117 XXXXXXXXXXGGNPIKTVRNDILQDSKRI----ISHIKTSRLDYHCQNV 161
N I ++ D Q ++ ISH K + Y N+
Sbjct: 231 LPLSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKLEDIPYDIFNL 279
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 109 (43.4 bits), Expect = 0.00041, P = 0.00041
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYF 69
++ ++ + F
Sbjct: 196 QLKSLARNSF 205
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/157 (23%), Positives = 76/157 (48%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+ +L+++DLS+NKL + + LF +R LT L++ N + +PV DC++L L +G+N
Sbjct: 136 MPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN 195
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDVPCEXXXX 118
++ ++ + F + +V+ ++ LI+L L L N++ V
Sbjct: 196 QLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSSLDWV 255
Query: 119 XXXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLD 155
GN I+ + + + + +++T +LD
Sbjct: 256 WNLEKMDLSGNEIEYMEPHVFET----VPYLQTLQLD 288
>MGI|MGI:2442313 [details] [associations]
symbol:Lrrc1 "leucine rich repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2442313 GO:GO:0005737 GO:GO:0016020 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 CTD:55227 HOVERGEN:HBG052357 OrthoDB:EOG498V0J
EMBL:AK051043 EMBL:AK082721 EMBL:AK147075 EMBL:BC046591
EMBL:BC087542 IPI:IPI00267845 IPI:IPI00453515 IPI:IPI00469577
RefSeq:NP_001139520.1 RefSeq:NP_766116.3 UniGene:Mm.28534
UniGene:Mm.482664 ProteinModelPortal:Q80VQ1 SMR:Q80VQ1
STRING:Q80VQ1 PhosphoSite:Q80VQ1 PaxDb:Q80VQ1 PRIDE:Q80VQ1
GeneID:214345 KEGG:mmu:214345 InParanoid:Q80VQ1 NextBio:374274
CleanEx:MM_LRRC1 Genevestigator:Q80VQ1
GermOnline:ENSMUSG00000032352 Uniprot:Q80VQ1
Length = 524
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 43/147 (29%), Positives = 63/147 (42%)
Query: 10 LSHNKLVSDSLPLFI-DMRSLTELNLSYNQLTMLP-VCTDCKNLTHLLLGFNKINNMEND 67
LS N + SLP I ++ +L L L N LT LP T + L L LG N+I N+
Sbjct: 133 LSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES 192
Query: 68 YFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXXXG 127
+SE+ +G+L NL LD+S+N L +P E
Sbjct: 193 -IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVIS 251
Query: 128 GNPIKTVRNDILQDSKRIISHIKTSRL 154
N ++T+ I + K I + +RL
Sbjct: 252 QNLLETIPEGIGKLKKLSILKLDQNRL 278
>UNIPROTKB|F1MX63 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 IPI:IPI00710385 UniGene:Bt.3202
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:DAAA02041895
Ensembl:ENSBTAT00000023709 Uniprot:F1MX63
Length = 381
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSL--P-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HNKL SD + P F +++L +LNL++N L +P + L L
Sbjct: 193 LENLLLLDLQHNKL-SDGVFKPDTFQGLKNLMQLNLAHNTLRKMPPKVPSA-IHQLYLDS 250
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
N+I + + YF +S+ + N ++ NL +L LS N ++ VP
Sbjct: 251 NRIEAIPSGYFKSFPNLAFIRLNYNQLSDRGLPKNSFNISNLLVLHLSHNRISSVP 306
>TAIR|locus:2117617 [details] [associations]
symbol:PIRL4 "plant intracellular ras group-related LRR
4" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AL161587
EMBL:AL117188 HSSP:P07359 HOGENOM:HOG000242894
ProtClustDB:CLSN2683891 EMBL:AY072324 EMBL:AY128730 EMBL:AY849574
IPI:IPI00541009 PIR:T41744 RefSeq:NP_195272.1 UniGene:At.22486
ProteinModelPortal:Q9SVW8 SMR:Q9SVW8 IntAct:Q9SVW8 STRING:Q9SVW8
PaxDb:Q9SVW8 PRIDE:Q9SVW8 EnsemblPlants:AT4G35470.1 GeneID:829699
KEGG:ath:AT4G35470 TAIR:At4g35470 InParanoid:Q9SVW8 OMA:ILSVRYN
PhylomeDB:Q9SVW8 Genevestigator:Q9SVW8 Uniprot:Q9SVW8
Length = 549
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 62/252 (24%), Positives = 113/252 (44%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFID-MRSLTELNLSYNQLTMLPVCT-DCKNLTHLLLGFN 59
LS L +LDLS N +V LP I + SLT+L+L N++ LP + NL +L LG N
Sbjct: 245 LSSLTSLDLSENHIVV--LPNTIGGLSSLTKLDLHSNRIGQLPESIGELLNLVYLNLGSN 302
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXX 119
+++++ + F + + ++G L++L LD+ N++ ++P
Sbjct: 303 QLSSLPSA-FSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCS 361
Query: 120 XXXXXXXGGNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDK 179
N +K + I K I+ ++ + Y+ MSS S E+++
Sbjct: 362 SLIELRADYNKLKALPEAI---GK--ITTLEILSVRYNNIRQLPTTMSSLASLKELDVSF 416
Query: 180 YKLDRT-KTL----TLCKVI---NIPESVYM-RGMSSQECTIEINIDKYKL----DRTKT 226
+L+ ++L TL K+ N + V + R + + E E++I ++ D K
Sbjct: 417 NELESVPESLCFATTLVKLNIGNNFADMVSLPRSIGNLEMLEELDISNNQIRVLPDSFKM 476
Query: 227 LTLCKVINIPES 238
LT +V E+
Sbjct: 477 LTKLRVFRAQEN 488
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00049
Identities = 48/191 (25%), Positives = 77/191 (40%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
HL++L L+ K+ S S L + + L L+LSYN + LP C L + L N+I+
Sbjct: 255 HLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFNGCYALEEISLQRNQIHQ 314
Query: 64 MENDYFXXXXXXXXXXXXXXXISEVSSNV-GDLINLAILDLSDNELTDVPCEXXXXXXXX 122
++ F I E+ L ++ LD+S NELT P E
Sbjct: 315 IKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLN----- 369
Query: 123 XXXXGGNPIKTVRNDILQDSKRIISHIKTSRLD----YHCQNVDGGGMSSQESTSEINID 178
G N +K V N L+++ + L Y C G + +T + ++
Sbjct: 370 ----GLNQLKLVGNFKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCDSYAHSNTDDNSLQ 425
Query: 179 KYKLDRTKTLT 189
Y + + K T
Sbjct: 426 DYSVAKEKGST 436
>RGD|619769 [details] [associations]
symbol:Fmod "fibromodulin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042060
"wound healing" evidence=IEP] [GO:0042476 "odontogenesis"
evidence=IEP] InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
RGD:619769 GO:GO:0005576 GO:GO:0005615 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 GO:GO:0042060
GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0042476 CTD:2331 HOGENOM:HOG000234447 HOVERGEN:HBG108061
KO:K08121 OrthoDB:EOG4CJVHR PANTHER:PTHR24371:SF11 EMBL:X82152
IPI:IPI00200225 RefSeq:NP_542429.1 UniGene:Rn.8778
ProteinModelPortal:P50609 STRING:P50609 PRIDE:P50609 GeneID:64507
KEGG:rno:64507 UCSC:RGD:619769 InParanoid:P50609 NextBio:613278
Genevestigator:P50609 GermOnline:ENSRNOG00000003183 Uniprot:P50609
Length = 376
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 50/205 (24%), Positives = 90/205 (43%)
Query: 10 LSHNKLVSDSL--PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
L N++ SD + +F +R L L L +N LT +P ++L L L N+I+ + N+
Sbjct: 136 LHGNQITSDKIGRKVFSKLRHLERLYLDHNNLTRMPGPLP-RSLRELHLDHNQISRVPNN 194
Query: 68 YFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXXXG 127
I EV S++ L +L +LDLS N L VP
Sbjct: 195 ALEGLENLTALYLHHNEIQEVGSSMRGLRSLILLDLSYNHLRRVP--DGLPSALEQLYLE 252
Query: 128 GNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKT 187
N + TV + + S +++ ++ RL ++ +G ++ S+S + +D L +
Sbjct: 253 HNNVYTVPDSYFRGSPKLL-YV---RLSHNSLTNNGLATNTFNSSSLLELD---LSYNQL 305
Query: 188 LTLCKVINIPESVYMRGMSSQECTI 212
+ V E++Y++G E +I
Sbjct: 306 QKIPPVNTNLENLYLQGNRINEFSI 330
>RGD|620226 [details] [associations]
symbol:Prelp "proline/arginine-rich end leucine-rich repeat
protein" species:10116 "Rattus norvegicus" [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=TAS]
[GO:0007569 "cell aging" evidence=IEA;ISO] [GO:0008201 "heparin
binding" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 RGD:620226 GO:GO:0005578 eggNOG:COG4886
GO:GO:0008201 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0007569 GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:5549 KO:K08125 OrthoDB:EOG44F69H
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AF163569 EMBL:BC072487
IPI:IPI00190287 RefSeq:NP_445837.1 UniGene:Rn.112602
ProteinModelPortal:Q9EQP5 PRIDE:Q9EQP5 Ensembl:ENSRNOT00000004241
GeneID:84400 KEGG:rno:84400 UCSC:RGD:620226 InParanoid:Q9EQP5
NextBio:616827 Genevestigator:Q9EQP5 GermOnline:ENSRNOG00000003120
Uniprot:Q9EQP5
Length = 377
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 2 LSHLKTLDLSHNKLVSDSL---PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HN+L SD + F +++L +LNL++N L +P + L L
Sbjct: 189 LENLLLLDLQHNRL-SDGVFKADTFQGLKNLMQLNLAHNILRRMPPKVP-PAIHQLYLDS 246
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
NKI + + YF +S+ + N ++ NL +L LS N++++VP
Sbjct: 247 NKIETIPSGYFKDFPNLAFIRMNYNKLSDRGLPKNSFNISNLLVLHLSHNKISNVP 302
>UNIPROTKB|Q9GKN8 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
EMBL:AF163568 IPI:IPI00710385 RefSeq:NP_776859.1 UniGene:Bt.3202
ProteinModelPortal:Q9GKN8 STRING:Q9GKN8 PRIDE:Q9GKN8 GeneID:282000
KEGG:bta:282000 CTD:5549 InParanoid:Q9GKN8 KO:K08125
OrthoDB:EOG44F69H NextBio:20805868 PANTHER:PTHR24371:SF15
Uniprot:Q9GKN8
Length = 381
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 2 LSHLKTLDLSHNKLVSDSL--P-LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGF 58
L +L LDL HNKL SD + P F +++L +LNL++N L +P + L L
Sbjct: 193 LENLLLLDLQHNKL-SDGVFKPDTFQGLKNLMQLNLAHNTLRKMPPKVPSA-IHQLYLDS 250
Query: 59 NKINNMENDYFXXXXXXXXXXXXXXXISE--VSSNVGDLINLAILDLSDNELTDVP 112
N+I + + YF +S+ + N ++ NL +L LS N ++ VP
Sbjct: 251 NRIEAIPSGYFKGFPNLAFIRLNYNQLSDRGLPKNSFNISNLLVLHLSHNRISSVP 306
>WB|WBGene00004929 [details] [associations]
symbol:soc-2 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0031344
"regulation of cell projection organization" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068919 GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799
GO:GO:0040025 GO:GO:0046579 GO:GO:0031344 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AF054827 EMBL:FO080091 PIR:B88684
PIR:T30947 PIR:T42998 RefSeq:NP_001021259.1 RefSeq:NP_741391.2
UniGene:Cel.18171 ProteinModelPortal:Q22875 SMR:Q22875
IntAct:Q22875 MINT:MINT-115544 STRING:Q22875 PaxDb:Q22875
PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1 EnsemblMetazoa:AC7.2a.2
GeneID:177286 KEGG:cel:CELE_AC7.2 UCSC:AC7.2b CTD:177286
WormBase:AC7.2a WormBase:AC7.2b InParanoid:Q22875 NextBio:896124
Uniprot:Q22875
Length = 559
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 34/133 (25%), Positives = 57/133 (42%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
T+++ HN++ + +F LT+LNL N+L LP+ ++T L L N++ +
Sbjct: 332 TINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLP 391
Query: 66 NDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXX 125
D + ++ + +G+L L LDL +NEL VP E
Sbjct: 392 ED-IEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLW 450
Query: 126 XGGNPIKTVRNDI 138
N I T+ I
Sbjct: 451 VQSNKILTLPRSI 463
>UNIPROTKB|Q22875 [details] [associations]
symbol:soc-2 "Leucine-rich repeat protein soc-2"
species:6239 "Caenorhabditis elegans" [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 EMBL:AF068919
GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799 GO:GO:0040025
GO:GO:0046579 GO:GO:0031344 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AF054827 EMBL:FO080091 PIR:B88684 PIR:T30947 PIR:T42998
RefSeq:NP_001021259.1 RefSeq:NP_741391.2 UniGene:Cel.18171
ProteinModelPortal:Q22875 SMR:Q22875 IntAct:Q22875 MINT:MINT-115544
STRING:Q22875 PaxDb:Q22875 PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1
EnsemblMetazoa:AC7.2a.2 GeneID:177286 KEGG:cel:CELE_AC7.2
UCSC:AC7.2b CTD:177286 WormBase:AC7.2a WormBase:AC7.2b
InParanoid:Q22875 NextBio:896124 Uniprot:Q22875
Length = 559
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 34/133 (25%), Positives = 57/133 (42%)
Query: 7 TLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV-CTDCKNLTHLLLGFNKINNME 65
T+++ HN++ + +F LT+LNL N+L LP+ ++T L L N++ +
Sbjct: 332 TINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLP 391
Query: 66 NDYFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXX 125
D + ++ + +G+L L LDL +NEL VP E
Sbjct: 392 ED-IEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLW 450
Query: 126 XGGNPIKTVRNDI 138
N I T+ I
Sbjct: 451 VQSNKILTLPRSI 463
>UNIPROTKB|E2R423 [details] [associations]
symbol:KERA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061303 "cornea development in camera-type
eye" evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 CTD:11081 KO:K08123 OMA:RWINLNK
EMBL:AAEX03009927 RefSeq:XP_852485.1 Ensembl:ENSCAFT00000009924
GeneID:482598 KEGG:cfa:482598 NextBio:20857165 Uniprot:E2R423
Length = 350
Score = 111 (44.1 bits), Expect = 0.00065, P = 0.00065
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 2 LSHLKTLDLSHNKLVSDSLP--LFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFN 59
L +L LDL HNKL+ ++ F +++L +LN++ N L +P N L L N
Sbjct: 165 LENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQLFLDNN 223
Query: 60 KINNMENDYFXXXXXXXXXXXXXXXISEVS--SNVGDLINLAILDLSDNELTDVP 112
I + +YF +S+ S+ D+ ++ L LS N+LT VP
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVP 278
>MGI|MGI:1328364 [details] [associations]
symbol:Fmod "fibromodulin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
MGI:MGI:1328364 GO:GO:0005615 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 GO:GO:0042060
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0042476
CTD:2331 HOVERGEN:HBG108061 KO:K08121 OMA:AQYDEDP OrthoDB:EOG4CJVHR
PANTHER:PTHR24371:SF11 EMBL:X94998 EMBL:BC064779 IPI:IPI00120187
RefSeq:NP_067330.1 UniGene:Mm.287146 ProteinModelPortal:P50608
SMR:P50608 STRING:P50608 PaxDb:P50608 PRIDE:P50608
Ensembl:ENSMUST00000048183 GeneID:14264 KEGG:mmu:14264
InParanoid:P50608 NextBio:285615 Bgee:P50608 CleanEx:MM_FMOD
Genevestigator:P50608 GermOnline:ENSMUSG00000041559 Uniprot:P50608
Length = 376
Score = 111 (44.1 bits), Expect = 0.00073, P = 0.00073
Identities = 50/205 (24%), Positives = 90/205 (43%)
Query: 10 LSHNKLVSDSL--PLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINNMEND 67
L N++ SD + +F +R L L L +N LT +P ++L L L N+I+ + N+
Sbjct: 136 LHGNQITSDKVGRKVFSKLRHLERLYLDHNNLTRMPGPLP-RSLRELHLDHNQISRVPNN 194
Query: 68 YFXXXXXXXXXXXXXXXISEVSSNVGDLINLAILDLSDNELTDVPCEXXXXXXXXXXXXG 127
I EV S++ L +L +LDLS N L VP
Sbjct: 195 ALEGLENLTALYLHHNEIQEVGSSMRGLRSLILLDLSYNHLRRVP--DGLPSALEQLYLE 252
Query: 128 GNPIKTVRNDILQDSKRIISHIKTSRLDYHCQNVDGGGMSSQESTSEINIDKYKLDRTKT 187
N + TV + + S +++ ++ RL ++ +G ++ S+S + +D L +
Sbjct: 253 HNNVYTVPDSYFRGSPKLL-YV---RLSHNSLTNNGLATNTFNSSSLLELD---LSYNQL 305
Query: 188 LTLCKVINIPESVYMRGMSSQECTI 212
+ V E++Y++G E +I
Sbjct: 306 QKIPPVNTNLENLYLQGNRINEFSI 330
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+++L+ LDLS+N+L S F +R L L+L N L +PV DC+NL L LG+N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 60 KINNMENDYF 69
+I ++ + F
Sbjct: 192 RIRSLARNVF 201
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+++L+ LDLS+N+L S F +R L L+L N L +PV DC+NL L LG+N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 60 KINNMENDYF 69
+I ++ + F
Sbjct: 192 RIRSLARNVF 201
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 2 LSHLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPV--CTDCKNLTHLLLGFN 59
+++L+ LDLS+N+L S F +R L L+L N L +PV DC+NL L LG+N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 60 KINNMENDYF 69
+I ++ + F
Sbjct: 192 RIRSLARNVF 201
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
+L+ LDLS+NKL + F +R L L+L N L +P V DC+NL L LG+N++
Sbjct: 134 NLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRL 193
Query: 62 NNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDV 111
++ + F S+++ ++ L NL + L N + V
Sbjct: 194 RSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSV 244
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLP--VCTDCKNLTHLLLGFNKI 61
+L+ LDLS+NKL + F +R L L+L N L +P V DC+NL L LG+N++
Sbjct: 134 NLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRL 193
Query: 62 NNMENDYFXXXXXXXXXXXXXXXISEVS-SNVGDLINLAILDLSDNELTDV 111
++ + F S+++ ++ L NL + L N + V
Sbjct: 194 RSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSV 244
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 4 HLKTLDLSHNKLVSDSLPLFIDMRSLTELNLSYNQLTMLPVCTDCKNLTHLLLGFNKINN 63
HL++L L+ K+ S S L + + L L+LSYN + LP C L + L N+I+
Sbjct: 274 HLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPSFDGCHALEEISLQRNQIHQ 333
Query: 64 MENDYFXXXXXXXXXXXXXXXISEVSSNV-GDLINLAILDLSDNELTDVPCE 114
++ F I E+ + L ++ LD+S NELT P E
Sbjct: 334 IKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTE 385
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 263 236 0.00089 113 3 11 22 0.41 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 81
No. of states in DFA: 578 (61 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.23u 0.09s 19.32t Elapsed: 00:00:06
Total cpu time: 19.25u 0.09s 19.34t Elapsed: 00:00:07
Start: Thu Aug 15 11:47:41 2013 End: Thu Aug 15 11:47:48 2013