Your job contains 1 sequence.
>psy3792
MLDDIFLDELVDDPEPMLNEDHHPEARESQDEDEQPPPNPSEPSEDAVRVAPKKKVIRNP
QPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYPKSNFVDV
LKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSDDIFNDLLAS
QPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3792
(224 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032698 - symbol:CG10336 species:7227 "Drosophila ... 320 6.3e-35 2
UNIPROTKB|Q0IHI4 - symbol:tipin "TIMELESS-interacting pro... 326 2.1e-29 1
UNIPROTKB|H3BU04 - symbol:TIPIN "TIMELESS-interacting pro... 300 1.2e-26 1
UNIPROTKB|Q9BVW5 - symbol:TIPIN "TIMELESS-interacting pro... 300 1.2e-26 1
MGI|MGI:1921571 - symbol:Tipin "timeless interacting prot... 297 2.5e-26 1
UNIPROTKB|Q3ZCC4 - symbol:TIPIN "TIMELESS-interacting pro... 295 4.0e-26 1
RGD|2323509 - symbol:Tipinl1 "TIMELESS interacting protei... 294 5.2e-26 1
ZFIN|ZDB-GENE-040801-189 - symbol:tipin "timeless interac... 294 5.2e-26 1
UNIPROTKB|E2RR93 - symbol:TIPIN "Uncharacterized protein"... 293 6.6e-26 1
RGD|1561480 - symbol:Tipin-ps1 "timeless interacting prot... 291 1.1e-25 1
RGD|1564084 - symbol:Tipin "timeless interacting protein"... 291 1.1e-25 1
UNIPROTKB|F1M1S7 - symbol:F1M1S7 "Uncharacterized protein... 291 1.1e-25 1
UNIPROTKB|F1SJJ8 - symbol:TIPIN "Uncharacterized protein"... 285 4.6e-25 1
UNIPROTKB|F1NK30 - symbol:TIPIN "TIMELESS-interacting pro... 264 7.8e-23 1
UNIPROTKB|Q5F416 - symbol:TIPIN "TIMELESS-interacting pro... 264 7.8e-23 1
UNIPROTKB|H3BTH1 - symbol:TIPIN "TIMELESS-interacting pro... 226 8.3e-19 1
UNIPROTKB|Q61XH2 - symbol:CBG03985 "Protein TIPIN homolog... 185 1.8e-14 1
WB|WBGene00017738 - symbol:F23C8.9 species:6239 "Caenorha... 183 3.0e-14 1
UNIPROTKB|Q9TXI0 - symbol:F23C8.9 "Protein TIPIN homolog"... 183 3.0e-14 1
UNIPROTKB|H3BVG9 - symbol:TIPIN "TIMELESS-interacting pro... 181 4.9e-14 1
UNIPROTKB|G8JLE5 - symbol:TIPIN "TIMELESS-interacting pro... 172 4.4e-13 1
ASPGD|ASPL0000067430 - symbol:AN6977 species:162425 "Emer... 158 3.6e-11 1
UNIPROTKB|A4RCW0 - symbol:CSM3 "Chromosome segregation in... 150 4.3e-10 1
POMBASE|SPBC30D10.04 - symbol:swi3 "replication fork prot... 141 8.4e-10 1
SGD|S000004651 - symbol:CSM3 "Replication fork associated... 121 6.4e-06 2
TAIR|locus:2075507 - symbol:AT3G02820 species:3702 "Arabi... 119 2.8e-05 1
>FB|FBgn0032698 [details] [associations]
symbol:CG10336 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048478
"replication fork protection" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 EMBL:AE014134 GO:GO:0008284 GO:GO:0000790
GO:GO:0048478 GO:GO:0031573 GO:GO:0033261 GO:GO:0000076
eggNOG:NOG323610 GeneTree:ENSGT00390000005764 KO:K10904
EMBL:AY118443 RefSeq:NP_609895.2 RefSeq:NP_724124.1
UniGene:Dm.11262 IntAct:Q8INX3 MINT:MINT-861476 STRING:Q8INX3
PaxDb:Q8INX3 PRIDE:Q8INX3 EnsemblMetazoa:FBtr0081095
EnsemblMetazoa:FBtr0273194 GeneID:35122 KEGG:dme:Dmel_CG10336
UCSC:CG10336-RA FlyBase:FBgn0032698 InParanoid:Q8INX3 OMA:HWGHRMY
OrthoDB:EOG49CNR4 PhylomeDB:Q8INX3 GenomeRNAi:35122 NextBio:791971
Bgee:Q8INX3 Uniprot:Q8INX3
Length = 307
Score = 320 (117.7 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 65/175 (37%), Positives = 97/175 (55%)
Query: 2 LDDIFLDELVDDPEPMLNEDHHPEARXXXXXXXXXXXXXXXXXXXAVRVAPKKKVIRNPQ 61
+DD+F D + DP+ L D E A V PKK+ +RNP+
Sbjct: 10 VDDLFNDNIPTDPD-QLPSDGEGEK----LFADDEDNGVEPGSQDAQIVEPKKRAVRNPR 64
Query: 62 PKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYPKSNFVDVL 121
P+L + L GPRGIQ IE YFKD+KFKGKG+E DL+ ++ L+HW +R+YP F DVL
Sbjct: 65 PRLTVETLRGPRGIQTIEDYFKDIKFKGKGYEKTDLDEVLRRLQHWGHRMYPTYTFDDVL 124
Query: 122 KRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSDDIFND 176
+E LG K+P+ H+ + RLG +E++ L + + + Q+ D+ F++
Sbjct: 125 NNIERLGKKKPLQVHMARYRLGQLEQMRAHEAEALEEAQD--EQQEGAGDEPFDE 177
Score = 74 (31.1 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 182 PSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQK 223
PSQ TP K+++ Q R+ NR++A+E+ A+ E+ K
Sbjct: 265 PSQPPTPAAKKLSNEQMARIAENRRLAQERLKAKQQQESGSK 306
Score = 36 (17.7 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 162 PAQPQQPTSDDIFNDLLA 179
P+QP P + + N+ +A
Sbjct: 265 PSQPPTPAAKKLSNEQMA 282
>UNIPROTKB|Q0IHI4 [details] [associations]
symbol:tipin "TIMELESS-interacting protein" species:8355
"Xenopus laevis" [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0031573
"intra-S DNA damage checkpoint" evidence=ISS] [GO:0033261
"regulation of S phase" evidence=ISS] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 HOVERGEN:HBG061130
KO:K10904 EMBL:AB208777 EMBL:BC123142 RefSeq:NP_001081090.1
UniGene:Xl.16228 DIP:DIP-46439N MINT:MINT-7386201 GeneID:394376
KEGG:xla:394376 CTD:394376 Uniprot:Q0IHI4
Length = 360
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 72/175 (41%), Positives = 108/175 (61%)
Query: 52 PKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRL 111
P ++V++ PQPKL+ QRL RG+ + F DVKFKGKGHE DL ++ +E+WA+RL
Sbjct: 62 PARRVVKRPQPKLDGQRLASQRGLPALRHMFDDVKFKGKGHETEDLKILLRQMENWAHRL 121
Query: 112 YPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQD--SNLVLSDTETPAQPQQPT 169
+PK F D L RLE +G+K+ V T +KKIR+ + ++ D S V+ TE A P+
Sbjct: 122 FPKLQFEDFLNRLESMGNKKEVQTCLKKIRMDL-PIVHDDFLSEEVVVQTEDHAI-DMPS 179
Query: 170 SDDIFNDLL-ASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQK 223
D F D L PSQ PV +++E +R+ RNR++A E+R+ ++ +AE +
Sbjct: 180 EDFSFPDELHVPSPSQ---PVKVDLSEETLQRIERNRRLALERRMEKMQAQAESQ 231
>UNIPROTKB|H3BU04 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0048478
"replication fork protection" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005634 GO:GO:0005737
GO:GO:0000077 GO:GO:0009411 GO:GO:0007049 GO:GO:0048478
EMBL:AC055855 HGNC:HGNC:30750 Ensembl:ENST00000562124 Bgee:H3BU04
Uniprot:H3BU04
Length = 294
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/176 (38%), Positives = 104/176 (59%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
VRV PK+ V RN PKL+AQRL RG+ + F KFKGKGHE DL ++ ++EHW
Sbjct: 52 VRVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHW 110
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQ 167
A+RL+PK F D + R+E LG K+ V T +K+IRL + L++D V ++ E +
Sbjct: 111 AHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIRLDL-PILHED--FVSNNDEVAENNEH 167
Query: 168 PTSDDIFNDLLA--SQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
+ + L S+ + + + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 168 DVTSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNKQLALERRQAKLLSNSQ 223
>UNIPROTKB|Q9BVW5 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000076 "DNA
replication checkpoint" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0033261 "regulation of S phase"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0033262
"regulation of DNA replication involved in S phase" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0051301 GO:GO:0007067
GO:GO:0008284 GO:GO:0000790 EMBL:CH471082 GO:GO:0048478
GO:GO:0031573 GO:GO:0000076 eggNOG:NOG323610 EMBL:AC055855
GO:GO:0033262 CTD:54962 HOVERGEN:HBG061130 KO:K10904 OMA:MLEPQEN
HOGENOM:HOG000154594 OrthoDB:EOG4ZGPDR EMBL:AK000523 EMBL:EU551725
EMBL:BC000870 EMBL:BK001386 IPI:IPI00306452 RefSeq:NP_060328.2
UniGene:Hs.740671 ProteinModelPortal:Q9BVW5 IntAct:Q9BVW5
STRING:Q9BVW5 PhosphoSite:Q9BVW5 DMDM:296452932 PaxDb:Q9BVW5
PRIDE:Q9BVW5 DNASU:54962 Ensembl:ENST00000261881 GeneID:54962
KEGG:hsa:54962 UCSC:uc002apr.2 GeneCards:GC15M066629
HGNC:HGNC:30750 HPA:HPA039704 MIM:610716 neXtProt:NX_Q9BVW5
PharmGKB:PA147357269 InParanoid:Q9BVW5 PhylomeDB:Q9BVW5
GenomeRNAi:54962 NextBio:58172 Bgee:Q9BVW5 CleanEx:HS_TIPIN
Genevestigator:Q9BVW5 Uniprot:Q9BVW5
Length = 301
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/176 (38%), Positives = 104/176 (59%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
VRV PK+ V RN PKL+AQRL RG+ + F KFKGKGHE DL ++ ++EHW
Sbjct: 52 VRVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHW 110
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQ 167
A+RL+PK F D + R+E LG K+ V T +K+IRL + L++D V ++ E +
Sbjct: 111 AHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIRLDL-PILHED--FVSNNDEVAENNEH 167
Query: 168 PTSDDIFNDLLA--SQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
+ + L S+ + + + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 168 DVTSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNKQLALERRQAKLLSNSQ 223
>MGI|MGI:1921571 [details] [associations]
symbol:Tipin "timeless interacting protein" species:10090
"Mus musculus" [GO:0000076 "DNA replication checkpoint"
evidence=ISO] [GO:0000077 "DNA damage checkpoint" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0009411 "response to UV" evidence=IMP] [GO:0031573 "intra-S DNA
damage checkpoint" evidence=ISO] [GO:0033261 "regulation of S
phase" evidence=ISO] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 MGI:MGI:1921571
GO:GO:0005794 GO:GO:0005737 GO:GO:0009411 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 eggNOG:NOG323610
CTD:54962 GeneTree:ENSGT00390000005764 HOVERGEN:HBG061130 KO:K10904
OMA:MLEPQEN HOGENOM:HOG000154594 OrthoDB:EOG4ZGPDR EMBL:AK003451
EMBL:AK003802 EMBL:AK011357 EMBL:AK038111 EMBL:BC016211
EMBL:BK001385 IPI:IPI00471129 RefSeq:NP_079648.1 UniGene:Mm.196219
ProteinModelPortal:Q91WA1 IntAct:Q91WA1 STRING:Q91WA1
PhosphoSite:Q91WA1 PRIDE:Q91WA1 Ensembl:ENSMUST00000034964
GeneID:66131 KEGG:mmu:66131 UCSC:uc009qbr.1 InParanoid:Q91WA1
NextBio:320724 Bgee:Q91WA1 CleanEx:MM_TIPIN Genevestigator:Q91WA1
Uniprot:Q91WA1
Length = 278
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 70/177 (39%), Positives = 106/177 (59%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V V PK+ V RN PKL+A RLT RG+ + F KFKGKGHE DL T++ ++EHW
Sbjct: 49 VPVPPKRTVKRN-LPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIRHMEHW 107
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGM--IEELNQDSNLVLSDTETPAQP 165
A+RL+PK F D + R+E LG+K+ V T +K+IRL + + E ++N + + P
Sbjct: 108 AHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVGEANGP--D 165
Query: 166 QQPTSDDIFNDLLASQPSQHI-TPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
T D F L +S S+ + + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 166 VSATGFDPF--LTSSSDSRKFASEPTRSLTEEQQQRIERNKQLALERRQAKLLSNSQ 220
>UNIPROTKB|Q3ZCC4 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9913
"Bos taurus" [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=ISS] [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0033261
"regulation of S phase" evidence=ISS] [GO:0031573 "intra-S DNA
damage checkpoint" evidence=ISS] [GO:0009411 "response to UV"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0051301 GO:GO:0007067
GO:GO:0008284 GO:GO:0000790 GO:GO:0048478 GO:GO:0031573
GO:GO:0033261 GO:GO:0000076 EMBL:BC102519 IPI:IPI00690249
RefSeq:NP_001098806.1 UniGene:Bt.49308 Ensembl:ENSBTAT00000000482
GeneID:506176 KEGG:bta:506176 CTD:54962
GeneTree:ENSGT00390000005764 HOVERGEN:HBG061130 KO:K10904
OMA:MLEPQEN NextBio:20867483 ArrayExpress:Q3ZCC4 Uniprot:Q3ZCC4
Length = 290
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 68/176 (38%), Positives = 108/176 (61%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V V PK+ V RN PKLNA+RL RG+ + F+ KFKGKGHE DL T++ ++EHW
Sbjct: 52 VPVPPKRTVKRNI-PKLNAERLISERGLPALRHVFEKAKFKGKGHEAEDLKTLIRHMEHW 110
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQP-Q 166
A+RL+PK F D + R+E LG+K+ V T +K+IRL + L++D V ++ E
Sbjct: 111 AHRLFPKLQFEDFIDRVECLGNKKEVQTCLKRIRLDL-PILHED--FVSNNDEVEENNGH 167
Query: 167 QPTSDDIFNDLLASQPS-QHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
T+ ++ + L S S + + + +TE +++R+ RN+Q+A E+R A+L ++
Sbjct: 168 DVTATELDHFLTNSYGSVEFASESSRSLTEEEQQRIERNKQLALERRQAKLLSNSQ 223
>RGD|2323509 [details] [associations]
symbol:Tipinl1 "TIMELESS interacting protein like 1"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009411
"response to UV" evidence=ISO] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=ISO] [GO:0033261 "regulation of S phase"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 RGD:1564084
RGD:2323509 GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 OMA:MLEPQEN IPI:IPI00769221
RefSeq:XP_002730112.1 RefSeq:XP_003754769.1
Ensembl:ENSRNOT00000056239 GeneID:100359731 KEGG:rno:100359731
CTD:100359731 ArrayExpress:F1LM96 Uniprot:F1LM96
Length = 276
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 65/173 (37%), Positives = 105/173 (60%)
Query: 52 PKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRL 111
P K++++ PKL+A RLT RG+ + F KFKGKGHE DL T++ ++EHWA+RL
Sbjct: 52 PPKRIVKRNIPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 111
Query: 112 YPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGM--IEELNQDSNLVLSDTETPAQPQQPT 169
+PK F D + R+E LG+K+ V T +K+IRL + + E ++N + ET + T
Sbjct: 112 FPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVE--ETNSLDAAAT 169
Query: 170 SDDIFNDLLASQPSQHI-TPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
D F + +S S+ + + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 170 GFDAF--VTSSSDSKRFASEASRNLTEEQQQRIERNKQLALERRQAKLLSNSQ 220
>ZFIN|ZDB-GENE-040801-189 [details] [associations]
symbol:tipin "timeless interacting protein"
species:7955 "Danio rerio" [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000076 "DNA replication checkpoint" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0033261 "regulation of S phase" evidence=ISS] [GO:0031573
"intra-S DNA damage checkpoint" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 ZFIN:ZDB-GENE-040801-189 GO:GO:0005634
GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 EMBL:CABZ01003662
Ensembl:ENSDART00000052474 OMA:KGHETEN Bgee:G1K2L6 Uniprot:G1K2L6
Length = 296
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 64/168 (38%), Positives = 103/168 (61%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V VA K++ ++ P+PKL+A RL +G+ + F+DVKFKGKGHE +L +M +E+W
Sbjct: 59 VPVA-KRRTVKRPRPKLDANRLISEKGLPALRTLFEDVKFKGKGHETENLKLLMLKMENW 117
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQ 167
A+RLYPK F + + ++E LG K+ V T +K+IRL M ++D ++ + P +
Sbjct: 118 AHRLYPKMQFEEFIDKVENLGGKKEVQTCLKRIRLDM-PITHEDYVAEEAEIQVPEE-SV 175
Query: 168 PTSDDIFNDLLASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLAR 215
P+ D F + P H TP +TE Q++R+ N+++A E+RLA+
Sbjct: 176 PSGDGGFPE----DPFIHSTPAPASLTEEQQQRIELNKRLALERRLAK 219
>UNIPROTKB|E2RR93 [details] [associations]
symbol:TIPIN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033261 "regulation of S phase" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 CTD:54962 GeneTree:ENSGT00390000005764 KO:K10904
OMA:MLEPQEN EMBL:AAEX03016225 RefSeq:XP_003433975.1
Ensembl:ENSCAFT00000027379 GeneID:100683743 KEGG:cfa:100683743
Uniprot:E2RR93
Length = 286
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 69/178 (38%), Positives = 108/178 (60%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V V PK+ V RN PKL+AQRL RG+ + F + KFKGKGHE DL T++ ++EHW
Sbjct: 52 VPVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDNAKFKGKGHEAEDLKTLIRHMEHW 110
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQ--- 164
A+RL+PK F D + R+E LG K+ V T +K+IRL + +++D + +D E
Sbjct: 111 AHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIRLDL-PIIHED--FISNDGEAGENHGY 167
Query: 165 PQQPTSDDIF-NDLLASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
+ T D F +L+ S+ ++ + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 168 DKTATELDPFLTNLVESE--NFVSEPNRSLTEEQQQRIERNKQLALERRQAKLLSNSQ 223
>RGD|1561480 [details] [associations]
symbol:Tipin-ps1 "timeless interacting protein, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=ISS] [GO:0033261 "regulation of S phase" evidence=ISS]
[GO:0048478 "replication fork protection" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR012923 Pfam:PF07962
ProDom:PD089639 RGD:1561480 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 eggNOG:NOG323610
CTD:54962 HOVERGEN:HBG061130 KO:K10904 HOGENOM:HOG000154594
OrthoDB:EOG4ZGPDR EMBL:BC097351 IPI:IPI00197525
RefSeq:NP_001020458.1 UniGene:Rn.225004 STRING:Q4QR88 GeneID:363076
KEGG:rno:363076 InParanoid:Q4QR88 NextBio:682354
ArrayExpress:Q4QR88 Genevestigator:Q4QR88 Uniprot:Q4QR88
Length = 276
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 64/173 (36%), Positives = 105/173 (60%)
Query: 52 PKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRL 111
P K++++ PKL+A RLT RG+ + F KFKGKGHE DL T++ ++EHWA+RL
Sbjct: 52 PPKRIVKRNIPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 111
Query: 112 YPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGM--IEELNQDSNLVLSDTETPAQPQQPT 169
+PK F D + R+E LG+K+ V T +K+IRL + + E ++N + ET + T
Sbjct: 112 FPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVE--ETNSLDAAAT 169
Query: 170 SDDIFNDLLASQPSQHI-TPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
D F + +S S+ + + +TE Q++R+ +N+Q+A E+R A+L ++
Sbjct: 170 GFDAF--VTSSSDSKRFASEASRNLTEEQQQRIEKNKQLALERRQAKLLSNSQ 220
>RGD|1564084 [details] [associations]
symbol:Tipin "timeless interacting protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
RGD:1564084 GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 IPI:IPI00197525
Ensembl:ENSRNOT00000066973 ArrayExpress:F1M2N9 Uniprot:F1M2N9
Length = 233
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 64/173 (36%), Positives = 105/173 (60%)
Query: 52 PKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRL 111
P K++++ PKL+A RLT RG+ + F KFKGKGHE DL T++ ++EHWA+RL
Sbjct: 9 PPKRIVKRNIPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 68
Query: 112 YPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGM--IEELNQDSNLVLSDTETPAQPQQPT 169
+PK F D + R+E LG+K+ V T +K+IRL + + E ++N + ET + T
Sbjct: 69 FPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVE--ETNSLDAAAT 126
Query: 170 SDDIFNDLLASQPSQHI-TPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
D F + +S S+ + + +TE Q++R+ +N+Q+A E+R A+L ++
Sbjct: 127 GFDAF--VTSSSDSKRFASEASRNLTEEQQQRIEKNKQLALERRQAKLLSNSQ 177
>UNIPROTKB|F1M1S7 [details] [associations]
symbol:F1M1S7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
IPI:IPI00952393 Ensembl:ENSRNOT00000065257 ArrayExpress:F1M1S7
Uniprot:F1M1S7
Length = 240
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 64/173 (36%), Positives = 105/173 (60%)
Query: 52 PKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRL 111
P K++++ PKL+A RLT RG+ + F KFKGKGHE DL T++ ++EHWA+RL
Sbjct: 10 PPKRIVKRNIPKLDATRLTSERGLPALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 69
Query: 112 YPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGM--IEELNQDSNLVLSDTETPAQPQQPT 169
+PK F D + R+E LG+K+ V T +K+IRL + + E ++N + ET + T
Sbjct: 70 FPKLQFEDFIDRVENLGNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVE--ETNSLDAAAT 127
Query: 170 SDDIFNDLLASQPSQHI-TPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
D F + +S S+ + + +TE Q++R+ +N+Q+A E+R A+L ++
Sbjct: 128 GFDAF--VTSSSDSKRFASEASRNLTEEQQQRIEKNKQLALERRQAKLLSNSQ 178
>UNIPROTKB|F1SJJ8 [details] [associations]
symbol:TIPIN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033261 "regulation of S phase" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 GeneTree:ENSGT00390000005764 OMA:MLEPQEN
EMBL:CU062652 Ensembl:ENSSSCT00000005454 Uniprot:F1SJJ8
Length = 289
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 65/175 (37%), Positives = 103/175 (58%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V V PK+ V RN PKL+AQRL RG+ + F KFKGKGHE DL ++ ++EHW
Sbjct: 51 VPVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHW 109
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQ 167
A+RL+PK F D + R+E LG+K+ V T +K+IRL + + D + +D
Sbjct: 110 AHRLFPKLQFEDFIDRVEYLGNKKEVQTCLKRIRLDL--PILHDDFISNNDDVGEDNGHD 167
Query: 168 PTSDDIFNDLL-ASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAE 221
T ++ L +S+ ++ + + +TE Q++R+ RN+Q+A E+R A+L ++
Sbjct: 168 VTVTELDPFLTNSSESAKFASESSRSLTEEQQQRIERNKQLALERRQAKLLSNSQ 222
>UNIPROTKB|F1NK30 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9031
"Gallus gallus" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IEA] [GO:0033261 "regulation of S phase"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 GeneTree:ENSGT00390000005764 OMA:MLEPQEN
IPI:IPI00572013 EMBL:AADN02038918 PRIDE:F1NK30
Ensembl:ENSGALT00000012379 Uniprot:F1NK30
Length = 283
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 61/171 (35%), Positives = 97/171 (56%)
Query: 54 KKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYP 113
+K ++ PKL+A RL RG+ + F +VKFKGKGHE DL T++ ++EHWA+RL+P
Sbjct: 64 RKAVKRSIPKLDANRLVSERGLPALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFP 123
Query: 114 KSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSD-D 172
K F D + R+E LG+K+ V T +K+IRL + L++D T +
Sbjct: 124 KLQFDDFIDRVESLGNKKEVQTCLKRIRLDL-PILHEDFTANEGGGGESNGLDMATEEVH 182
Query: 173 IFNDLLASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQK 223
F+ + S T +TE Q++R+ RNRQ+A E+R A++ ++ +
Sbjct: 183 SFSGNVGELDSLPGTT----LTEEQQQRIKRNRQLALERRQAKMQCNSQSQ 229
>UNIPROTKB|Q5F416 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9031
"Gallus gallus" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0033261 "regulation of S phase" evidence=ISS]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 GO:GO:0008284 GO:GO:0000790
GO:GO:0048478 GO:GO:0031573 GO:GO:0033261 GO:GO:0000076
eggNOG:NOG323610 CTD:54962 HOVERGEN:HBG061130 KO:K10904
EMBL:AJ851484 IPI:IPI00572013 RefSeq:NP_001012708.1
UniGene:Gga.44705 STRING:Q5F416 GeneID:415548 KEGG:gga:415548
HOGENOM:HOG000154594 InParanoid:Q5F416 OrthoDB:EOG4ZGPDR
NextBio:20819131 Uniprot:Q5F416
Length = 283
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 61/171 (35%), Positives = 97/171 (56%)
Query: 54 KKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYP 113
+K ++ PKL+A RL RG+ + F +VKFKGKGHE DL T++ ++EHWA+RL+P
Sbjct: 64 RKAVKRSIPKLDANRLVSERGLPALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFP 123
Query: 114 KSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSD-D 172
K F D + R+E LG+K+ V T +K+IRL + L++D T +
Sbjct: 124 KLQFDDFIDRVESLGNKKEVQTCLKRIRLDL-PILHEDFTANEGGGGESNGLDMATEEVH 182
Query: 173 IFNDLLASQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQK 223
F+ + S T +TE Q++R+ RNRQ+A E+R A++ ++ +
Sbjct: 183 SFSGNVGELDSLPGTT----LTEEQQQRIKRNRQLALERRQAKMQCNSQSQ 229
>UNIPROTKB|H3BTH1 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
EMBL:AC055855 HGNC:HGNC:30750 Ensembl:ENST00000568216 Bgee:H3BTH1
Uniprot:H3BTH1
Length = 141
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/91 (48%), Positives = 59/91 (64%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
VRV PK+ V RN PKL+AQRL RG+ + F KFKGKGHE DL ++ ++EHW
Sbjct: 52 VRVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHW 110
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIK 138
A+RL+PK F D + R+E LG K+ V ++
Sbjct: 111 AHRLFPKLQFEDFIDRVEYLGSKKEVQVSVE 141
>UNIPROTKB|Q61XH2 [details] [associations]
symbol:CBG03985 "Protein TIPIN homolog" species:6238
"Caenorhabditis briggsae" [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0031573
"intra-S DNA damage checkpoint" evidence=ISS] [GO:0033261
"regulation of S phase" evidence=ISS] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 EMBL:HE600906
eggNOG:NOG323610 KO:K10904 RefSeq:XP_002639397.1
EnsemblMetazoa:CBG03985 GeneID:8581390 KEGG:cbr:CBG03985
CTD:8581390 WormBase:CBG03985 HOGENOM:HOG000154593 OMA:MKKYAYW
Uniprot:Q61XH2
Length = 239
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 53 KKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLY 112
+ K + NP+ LN + LTGP+GI + + F++ K +L +M +W + ++
Sbjct: 44 RTKKLTNPRLALNEKTLTGPKGITALREAFQNFNPNPKDDPYKNLEKMMKKYAYWGHLMF 103
Query: 113 PKSNFVDVLKRLEVLGHKRPVMTHIKKIRLG-MIEELNQDSNLVLSDTETPAQPQQPTSD 171
PK DVL R+E LG +R V +I K RLG +++ + S D
Sbjct: 104 PKMKTEDVLNRVETLGTRRQVKLYIMKQRLGESTDDVENEKRETKSKNGIIDDGADDDED 163
Query: 172 DIFNDLLASQ-PSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLAMEAEQ 222
D+FNDL + P++ I K + +++ + AEE+ R+ ME E+
Sbjct: 164 DLFNDLPEKETPTKPINHTEKVVDSPEKKNGQVSNNDAEEEEY-RM-MEEER 213
>WB|WBGene00017738 [details] [associations]
symbol:F23C8.9 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0008284
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 eggNOG:NOG323610 GeneTree:ENSGT00390000005764
KO:K10904 HOGENOM:HOG000154593 OMA:MKKYAYW EMBL:FO081207 PIR:T33829
RefSeq:NP_490977.1 ProteinModelPortal:Q9TXI0 PaxDb:Q9TXI0
EnsemblMetazoa:F23C8.9 GeneID:171803 KEGG:cel:CELE_F23C8.9
UCSC:F23C8.9 CTD:171803 WormBase:F23C8.9 InParanoid:Q9TXI0
NextBio:872761 Uniprot:Q9TXI0
Length = 233
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 53 KKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLY 112
+ K + NP+ LN + LTGP+GI + + KD K K A+L +M +W + ++
Sbjct: 44 RTKRLANPRLALNERILTGPKGISALRETLKDFKPNPKDDPYANLEKLMKKYAYWGHLMF 103
Query: 113 PKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSDD 172
PK DVL R+E LG +R V + K RLG E +DS + + SD+
Sbjct: 104 PKMKTEDVLNRVETLGTRRQVKVFMIKHRLG---ETGEDSEHEEQENQKNGIIDDGASDN 160
Query: 173 IFNDLLASQPSQHITPVVKEITEAQRERMLR-NRQIAEEKRLA---RLAMEAEQKK 224
+DL P + +T + +E ++ + + EE R+ RL E E K+
Sbjct: 161 D-DDLFKDLPEKEVTTEKAKNSEKSDQKTAEIDENVEEEYRMMEEERLREEQEAKE 215
>UNIPROTKB|Q9TXI0 [details] [associations]
symbol:F23C8.9 "Protein TIPIN homolog" species:6239
"Caenorhabditis elegans" [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0033261 "regulation of S phase" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000790
"nuclear chromatin" evidence=ISS] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=ISS] InterPro:IPR012923 Pfam:PF07962
ProDom:PD089639 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0008284 GO:GO:0000790 GO:GO:0048478 GO:GO:0031573
GO:GO:0033261 GO:GO:0000076 eggNOG:NOG323610
GeneTree:ENSGT00390000005764 KO:K10904 HOGENOM:HOG000154593
OMA:MKKYAYW EMBL:FO081207 PIR:T33829 RefSeq:NP_490977.1
ProteinModelPortal:Q9TXI0 PaxDb:Q9TXI0 EnsemblMetazoa:F23C8.9
GeneID:171803 KEGG:cel:CELE_F23C8.9 UCSC:F23C8.9 CTD:171803
WormBase:F23C8.9 InParanoid:Q9TXI0 NextBio:872761 Uniprot:Q9TXI0
Length = 233
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 53 KKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLY 112
+ K + NP+ LN + LTGP+GI + + KD K K A+L +M +W + ++
Sbjct: 44 RTKRLANPRLALNERILTGPKGISALRETLKDFKPNPKDDPYANLEKLMKKYAYWGHLMF 103
Query: 113 PKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSDD 172
PK DVL R+E LG +R V + K RLG E +DS + + SD+
Sbjct: 104 PKMKTEDVLNRVETLGTRRQVKVFMIKHRLG---ETGEDSEHEEQENQKNGIIDDGASDN 160
Query: 173 IFNDLLASQPSQHITPVVKEITEAQRERMLR-NRQIAEEKRLA---RLAMEAEQKK 224
+DL P + +T + +E ++ + + EE R+ RL E E K+
Sbjct: 161 D-DDLFKDLPEKEVTTEKAKNSEKSDQKTAEIDENVEEEYRMMEEERLREEQEAKE 215
>UNIPROTKB|H3BVG9 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0048478
"replication fork protection" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005634 GO:GO:0005737
GO:GO:0000077 GO:GO:0009411 GO:GO:0007049 GO:GO:0048478
EMBL:AC055855 HGNC:HGNC:30750 Ensembl:ENST00000570251 Bgee:H3BVG9
Uniprot:H3BVG9
Length = 116
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
VRV PK+ V RN PKL+AQRL RG+ + F KFKGKGHE DL ++ ++EHW
Sbjct: 52 VRVPPKRTVKRNI-PKLDAQRLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHW 110
Query: 108 ANRLYP 113
A+RL+P
Sbjct: 111 AHRLFP 116
>UNIPROTKB|G8JLE5 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR012923 Pfam:PF07962
ProDom:PD089639 GO:GO:0005634 GO:GO:0005794 GO:GO:0000077
GO:GO:0009411 GO:GO:0007049 GO:GO:0048478 EMBL:AC055855
HGNC:HGNC:30750 Ensembl:ENST00000367709 Bgee:G8JLE5 Uniprot:G8JLE5
Length = 200
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 39/124 (31%), Positives = 72/124 (58%)
Query: 100 IMSNLEHWANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDT 159
++ ++EHWA+RL+PK F D + R+E LG K+ V T +K+IRL + L++D V ++
Sbjct: 2 LIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIRLDL-PILHED--FVSNND 58
Query: 160 ETPAQPQQPTSDDIFNDLLA--SQPSQHITPVVKEITEAQRERMLRNRQIAEEKRLARLA 217
E + + + L S+ + + + +TE Q++R+ RN+Q+A E+R A+L
Sbjct: 59 EVAENNEHDVTSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNKQLALERRQAKLL 118
Query: 218 MEAE 221
++
Sbjct: 119 SNSQ 122
>ASPGD|ASPL0000067430 [details] [associations]
symbol:AN6977 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 GO:GO:0005634
GO:GO:0006974 GO:GO:0007049 EMBL:BN001304 GO:GO:0048478
EnsemblFungi:CADANIAT00000504 HOGENOM:HOG000234964 OMA:KHARISK
Uniprot:C8VB87
Length = 304
Score = 158 (60.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 58 RNPQPKLNAQRLTGPRGIQCIEQYFK-DVKFKGKGHELADLNTIMSNLEHWANRLYPKSN 116
R P KL+ RL GI + + K ++FKGKGHE +DL +++ + W + L+P++
Sbjct: 70 RQPVAKLDENRLLTQAGIPKLRRSAKKSLRFKGKGHEFSDLARLLNFYQLWLDDLFPRAK 129
Query: 117 FVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQPTSDDIFND 176
FVD L +E LGH + + T +R I+E + + DT Q D ND
Sbjct: 130 FVDGLAMIERLGHSKRLQT----MRRAWIDE--EKPKAAVEDTLRTEQTNSNDKDITSND 183
Query: 177 LLASQPSQHI 186
L + Q I
Sbjct: 184 TLMANHRQSI 193
>UNIPROTKB|A4RCW0 [details] [associations]
symbol:CSM3 "Chromosome segregation in meiosis protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005634 GO:GO:0007126 GO:GO:0006281 EMBL:CM000230
EMBL:CM001237 GO:GO:0048478 KO:K10998 RefSeq:XP_003721336.1
EnsemblFungi:MGG_09005T0 GeneID:2680128 KEGG:mgr:MGG_09005
eggNOG:NOG323610 OrthoDB:EOG4936TD Uniprot:A4RCW0
Length = 357
Score = 150 (57.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 48 VRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHW 107
V VA + +V P+ KL+ RL +GI + + ++ KGKGHE +D ++S + W
Sbjct: 60 VSVAKRARV---PRVKLDETRLLSDKGIPALRKRAGTLRLKGKGHEFSDAARLLSFYQLW 116
Query: 108 ANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELNQDSNLVLSDTETPAQPQQ 167
+ L+PK+ F+D L +E GHK T + K R I +L N+ D + A
Sbjct: 117 LDDLFPKAKFLDALAMVEKAGHK----TTMHKARTDWINDLKP--NMTAPDNDGHA---- 166
Query: 168 PTSDDIFNDLLASQPSQHITPVVKE 192
DI + +A S I P+ ++
Sbjct: 167 ----DIGHAPVAQPQSSRIAPIFEK 187
>POMBASE|SPBC30D10.04 [details] [associations]
symbol:swi3 "replication fork protection complex
subunit Swi3" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0031298 "replication fork
protection complex" evidence=TAS] [GO:0043111 "replication fork
arrest" evidence=IC] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0048478 "replication fork protection"
evidence=IDA] [GO:0071515 "genetic imprinting at mating-type locus"
evidence=IMP] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
PomBase:SPBC30D10.04 GO:GO:0005739 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GO:GO:0031298 GO:GO:0043111 KO:K10998 eggNOG:NOG323610
OrthoDB:EOG4936TD GO:GO:0071515 EMBL:AY498547 EMBL:AY623652
PIR:T40192 RefSeq:NP_001018832.1 IntAct:O14350 STRING:O14350
EnsemblFungi:SPBC30D10.04.1 GeneID:3361323 KEGG:spo:SPBC30D10.04
NextBio:20811395 Uniprot:O14350
Length = 181
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 43/125 (34%), Positives = 57/125 (45%)
Query: 63 KLNAQRLTGPRGIQCIEQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYPKSNFVDVLK 122
K + +RL GI + + + VK KGKGHE DL ++ W + LYP++ F D +
Sbjct: 51 KFDEERLISENGIPKLRKMMRKVKLKGKGHEAKDLKQLLGMYHIWTHELYPRATFDDSIS 110
Query: 123 RLEVLGHKRPVMTHIKKIRLGMIEEL----NQDSNLVL----SDTE----TPAQPQ-QPT 169
L+ LG R V K R G I E+ DSN L S T P Q T
Sbjct: 111 YLKTLGKHRSV----KVRRRGWINEIAVENGSDSNASLFTGPSSNSLVNLTSGDPYVQDT 166
Query: 170 SDDIF 174
+DD F
Sbjct: 167 ADDAF 171
>SGD|S000004651 [details] [associations]
symbol:CSM3 "Replication fork associated factor" species:4932
"Saccharomyces cerevisiae" [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008156 "negative regulation of DNA
replication" evidence=IEA] [GO:0043111 "replication fork arrest"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA;IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IGI;IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0031298 "replication fork
protection complex" evidence=IDA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IGI;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA;IMP] [GO:0000076 "DNA replication checkpoint"
evidence=IGI] [GO:0007126 "meiosis" evidence=IEA] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 SGD:S000004651
GO:GO:0006281 EMBL:BK006946 EMBL:Z49703 GO:GO:0034087 GO:GO:0045132
GO:GO:0043570 GO:GO:0048478 GO:GO:0000076 GO:GO:0031298
GO:GO:0043111 KO:K10998 OrthoDB:EOG4936TD EMBL:AY558400 PIR:S54548
RefSeq:NP_013763.1 ProteinModelPortal:Q04659 DIP:DIP-1944N
IntAct:Q04659 MINT:MINT-400677 STRING:Q04659 PaxDb:Q04659
EnsemblFungi:YMR048W GeneID:855067 KEGG:sce:YMR048W CYGD:YMR048w
eggNOG:KOG3004 NextBio:978332 Genevestigator:Q04659
GermOnline:YMR048W Uniprot:Q04659
Length = 317
Score = 121 (47.7 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 28/117 (23%), Positives = 60/117 (51%)
Query: 58 RNPQPKLNAQRLTGPRGIQCI-EQYFKDVKFKGKGHELADLNTIMSNLEHWANRLYPKSN 116
R PQ KL A++L +G+ + + K ++ K + +L+ I+ + WA+ L+PK+
Sbjct: 48 RRPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAK 107
Query: 117 FVDVLKRLEVLGHKRPVMTHIKKIRLGMI-EELNQDSNLVLSDTETPAQPQQPTSDD 172
F D +K + +G PV+ ++ R+ + +E+ ++ +T + Q P ++
Sbjct: 108 FKDFMKICQTVGKTDPVL---REYRVSLFRDEMGMSFDVGTRETGQDLERQSPMVEE 161
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 181 QPSQHITPVVKEITEAQRERMLRNRQIAEEKR 212
Q + +P+V+E + ER + A++KR
Sbjct: 150 QDLERQSPMVEEHVTSAEERPIVADSFAQDKR 181
>TAIR|locus:2075507 [details] [associations]
symbol:AT3G02820 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0051726 "regulation of
cell cycle" evidence=RCA] InterPro:IPR001878 InterPro:IPR012923
Pfam:PF00098 Pfam:PF07962 ProDom:PD089639 PROSITE:PS50158
SMART:SM00343 GO:GO:0005634 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0006974 GO:GO:0007049
Gene3D:4.10.60.10 GO:GO:0048478 KO:K10904 EMBL:BT025722
EMBL:AK119002 IPI:IPI00523478 RefSeq:NP_186931.2 UniGene:At.41073
EnsemblPlants:AT3G02820.1 GeneID:821018 KEGG:ath:AT3G02820
TAIR:At3g02820 HOGENOM:HOG000239518 InParanoid:Q8GW91 OMA:WSRDCPS
PhylomeDB:Q8GW91 ProtClustDB:CLSN2690678 Genevestigator:Q8GW91
Uniprot:Q8GW91
Length = 282
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 47 AVRVAPKKKVIRNPQPKLNAQRLTGPRGIQCIEQYF-KDVKFKGKGHELADLNTIMSNLE 105
++ APK R +PKL + L G+ + +YF K K++G+G E++DL ++
Sbjct: 57 SIAPAPKVTKTRVQRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYS 116
Query: 106 HWANRLYPKSNFVDVLKRLEVLGHKRPVMTHIKKIRLGMIEELN-------QDSNLVLSD 158
W L P +F + +++ + + V I ++R + ++ Q+ N V SD
Sbjct: 117 EWHTHLLPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSD 176
Query: 159 TETPAQPQQ-----PT-SDDIFNDLLASQPSQHITPVVKEITE--AQRERMLRNRQIAEE 210
+ QP P+ S D + A + S + + ++ + + M ++ ++ EE
Sbjct: 177 DQDMDQPSHDEENIPSKSVDADTNADAFEDSM-LNEIFDNASKLPSDEQNMDKSSELTEE 235
Query: 211 KRLARLAMEAEQKK 224
+R AR MEA + K
Sbjct: 236 QR-AR--MEANRLK 246
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 224 205 0.00096 111 3 11 22 0.38 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 586 (62 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.29u 0.07s 21.36t Elapsed: 00:00:28
Total cpu time: 21.29u 0.07s 21.36t Elapsed: 00:00:28
Start: Thu Aug 15 11:54:49 2013 End: Thu Aug 15 11:55:17 2013