BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy38
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q17QU4|RB39B_BOVIN Ras-related protein Rab-39B OS=Bos taurus GN=RAB39B PE=2 SV=1
Length = 213
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q+SDPTVGVDFF+RLV + G RIKLQ+WDTAGQERFRSIT++YYRNSVG LL++DIT
Sbjct: 33 FAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDIT 92
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
+R SF+++ W+ E K H++P++ VF LVG K DL R+V+ EA+ A+ + +
Sbjct: 93 NRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDL---DTQRQVTRHEAEKLAAAYGMKY 149
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGF 171
ETS+R VE AFT +T++IY V+ GD +++GWEG+K+GF
Sbjct: 150 IETSARDAINVEKAFTDLTRDIYELVKRGDITIQEGWEGVKSGF 193
>sp|Q8BHC1|RB39B_MOUSE Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1
Length = 213
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 129/185 (69%), Gaps = 4/185 (2%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q+SDPTVGVDFF+RLV + G RIKLQ+WDTAGQERFRSIT++YYRNSVG LL++DIT
Sbjct: 33 FAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDIT 92
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
+R SF+++ W+ E K H++P++ VF LVG K DL R+V+ EA+ A+ + +
Sbjct: 93 NRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDL---DTQRQVTRHEAEKLAAAYGMKY 149
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEP 187
ETS+R VE AFT +T++IY V+ G+ +++GWEG+K+GF N V + ++
Sbjct: 150 IETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKSGFV-PNVVHSSEEVIKSE 208
Query: 188 AKSSC 192
+ C
Sbjct: 209 RRCLC 213
>sp|Q96DA2|RB39B_HUMAN Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1
Length = 213
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q+SDPTVGVDFF+RLV + G RIKLQ+WDTAGQERFRSIT++YYRNSVG LL++DIT
Sbjct: 33 FAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDIT 92
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
+R SF+++ W+ E K H++P++ VF LVG K DL R+V+ EA+ A+ + +
Sbjct: 93 NRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDL---DTQRQVTRHEAEKLAAAYGMKY 149
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGF 171
ETS+R VE AFT +T++IY V+ G+ +++GWEG+K+GF
Sbjct: 150 IETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVKSGF 193
>sp|Q8BHD0|RB39A_MOUSE Ras-related protein Rab-39A OS=Mus musculus GN=Rab39a PE=2 SV=1
Length = 217
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Query: 7 LYIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDI 66
L+ DPTVGVDFF+RL+ + G RIKLQLWDTAGQERFRSIT+SYYRNSVG LV+DI
Sbjct: 36 LHSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDI 95
Query: 67 TSRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDIL 126
T+R SFEH+ W+ EAK H++P + VF LVG K DL R+VS EA+ ++ +
Sbjct: 96 TNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQ---RQVSREEAERLSTDCGMK 152
Query: 127 HFETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGF 171
+ ETS++ VE +FT +T++IY ++ G+ ++DGWEG+K+GF
Sbjct: 153 YIETSAKDATNVEESFTILTRDIYELIKKGEICIQDGWEGVKSGF 197
>sp|Q14964|RB39A_HUMAN Ras-related protein Rab-39A OS=Homo sapiens GN=RAB39A PE=2 SV=2
Length = 217
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Query: 13 DPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASF 72
DPTVGVDFF+RL+ + G RIKLQLWDTAGQERFRSIT+SYYRNSVG LV+DIT+R SF
Sbjct: 42 DPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSF 101
Query: 73 EHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSS 132
EH+ W+ EAK +++P R VF LVG K DL R+V+ EA+ ++ + + ETS+
Sbjct: 102 EHVKDWLEEAKMYVQPFRIVFLLVGHKCDLASQ---RQVTREEAEKLSADCGMKYIETSA 158
Query: 133 RSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGF 171
+ VE +FT +T++IY ++ G+ ++DGWEG+K+GF
Sbjct: 159 KDATNVEESFTILTRDIYELIKKGEICIQDGWEGVKSGF 197
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 116/189 (61%), Gaps = 15/189 (7%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++ + DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMINI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H P+ + L+G K DL R V+ E + FA ++ ++ ET
Sbjct: 93 TFNHLASWLEDARQHANPNMTIM-LIGNKCDLTHR---RAVTTEEGEQFAKEHGLIFLET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAK- 189
S+R+ VE AF +EIY ++Q G + V + GIK G+ NA A+P +
Sbjct: 149 SARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNA----GPQAAKPGEG 204
Query: 190 -----SSCC 193
SSCC
Sbjct: 205 DARKSSSCC 213
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 153 bits (386), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 15/189 (7%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++ + DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMINI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H P+ + L+G K DL R V+ E + FA ++ ++ ET
Sbjct: 93 TFNHLASWLEDARQHANPNMTIM-LIGNKCDLTHR---RAVTTEEGEQFAKEHGLIFLET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAK- 189
S+R+ VE AF +EIY ++Q G + V + GIK G+ NA +P +
Sbjct: 149 SARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNA----GPQTVKPGEG 204
Query: 190 -----SSCC 193
SSCC
Sbjct: 205 GAAKSSSCC 213
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNAVL 178
S+++ VE AF +EIY ++Q G + + + GIK G + TNA L
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATL 198
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 149 bits (377), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 112/184 (60%), Gaps = 8/184 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR+VT+ DG IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMVTV-DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H P+ + L+G K DL R VS+ E + FA ++ +L E
Sbjct: 93 TFNHLASWLEDARQHANPNMSIM-LIGNKCDLAH---KRAVSKEEGQQFAKEHGLLFLEA 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRT-NAVLDDDLMLAEPAK 189
S+R+ VE AF +I +Q G + V + GIK G+ RT A D +++
Sbjct: 149 SARTAQNVEEAFIETAAKILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGG- 207
Query: 190 SSCC 193
CC
Sbjct: 208 -GCC 210
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNA 176
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNA 196
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSNM-VIMLIGNKSDL---EARREVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
S+++ VE AF +EIY ++Q G + + + GIK G
Sbjct: 149 SAKTAANVEEAFINTAKEIYQKIQDGVFDINNEANGIKIG 188
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNAV 177
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNAT 197
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNAV 177
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNAT 197
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNAV 177
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNAT 197
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNAV 177
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNAT 197
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
S+++ VE AF +EIY ++Q G + + + GIK G
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 188
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTMGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRD 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL REV + E +AFA ++ ++ ET
Sbjct: 93 TFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESR---REVKKEEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG--FSRTNA 176
S+++ VE AF +EIY ++Q G + + + GIK G + TNA
Sbjct: 149 SAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNA 196
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ D IKLQ+WDTAGQE FRSIT+SYYR S GALLVYDIT R
Sbjct: 33 VHDLTIGVEFGARMITI-DNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRD 91
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A+ + + + L+G K D+ R VS E + FA +N ++ ET
Sbjct: 92 TFNHLTCWLKDARSYANSNMTII-LIGNKSDMES---KRAVSYEEGRQFADENGLIFLET 147
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAKS 190
S+++ VE AF +IY ++Q GD+ + + GIK G + D +PA
Sbjct: 148 SAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAPTSK----QDGTDQKPAGG 203
Query: 191 SCC 193
CC
Sbjct: 204 GCC 206
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 5/160 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR+V + DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMVNI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H V L+G K DL R+V E +AFA ++ ++ ET
Sbjct: 93 TFNHLTSWLEDARQH-SSSNMVIMLIGNKSDLESR---RDVKREEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
S+++ VE AF +EIY ++Q G + V + GIK G
Sbjct: 149 SAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIG 188
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 5/160 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR+V + DG +IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMVNI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + V L+G K DL R+V E +AFA ++ ++ ET
Sbjct: 93 TFNHLTSWLEDARQHSSSNM-VIMLIGNKSDLESR---RDVKREEGEAFAREHGLIFMET 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
S+++ VE A+ +EIY ++Q G + V + GIK G
Sbjct: 149 SAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIG 188
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ D IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + + LVG K DL R VS E + FA ++ ++ E
Sbjct: 93 TFNHLASWLEDARQHANANMTIM-LVGNKCDLSHR---RAVSYEEGEQFAKEHGLIFMEA 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFS 172
S+++ VE AF IY ++Q G + V + GIK G++
Sbjct: 149 SAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYA 190
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++T+ D IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMITI-DNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + + L+G K DL R VS E + FA ++ ++ E
Sbjct: 93 TFNHLASWLEDARQHANANMTIM-LIGNKCDLAHR---RAVSTEEGEQFAKEHGLIFMEA 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFS 172
S+++ VE AF IY ++Q G + V + GIK G+
Sbjct: 149 SAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKVGYG 190
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F AR++ + D IKLQ+WDTAGQE FRSIT+SYYR + GALLVYDIT R
Sbjct: 34 VHDLTIGVEFGARMINI-DNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ +A++H + + LVG K DL R VS E + FA ++ ++ E
Sbjct: 93 TFNHLASWLEDARQHANANMTIM-LVGNKCDLSHR---RAVSYEEGEQFAKEHGLIFMEA 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGF 171
S+++ VE AF IY ++Q G + V + GIK G+
Sbjct: 149 SAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGY 189
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Query: 15 TVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEH 74
T+GV+F R++ + G +IKLQ+WDTAGQERFR++T+SYYR + GAL+VYDIT R+++ H
Sbjct: 43 TIGVEFGTRIIEV-SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 101
Query: 75 IPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRS 134
+ W+ +A+ P+ V L+G K DL R+V+ EAK FA +N +L E S+++
Sbjct: 102 LSSWLTDARNLTNPN-TVIILIGNKADLE---AQRDVTYEEAKQFAEENGLLFLEASAKT 157
Query: 135 GFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIK 168
G VE+AF ++IY +Q G + G++
Sbjct: 158 GENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 133 bits (334), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q S+ T+GV+F +R+V + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDIT
Sbjct: 33 FKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
SR ++ + W+ +A+ P+ V L G K DL REV+ EA FA +N+++
Sbjct: 92 SRETYNALTNWLTDARTLASPN-IVIILCGNKKDL---DADREVTFLEASRFAQENELMF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
ETS+ +G VE AF + I N+++SG+ E GI+ G
Sbjct: 148 LETSALTGENVEEAFLKCARSIPNKIESGELDPERMGSGIQYG 190
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q S+ T+GV+F +R+V + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDIT
Sbjct: 33 FKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
SR ++ + W+ +A+ P+ V L G K DL REV+ EA FA +N+++
Sbjct: 92 SRETYNSLAAWLTDARTLASPN-IVVILCGNKKDL---DPEREVTFLEASRFAQENELMF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
ETS+ +G VE AF + I N++ SG+ E GI+ G
Sbjct: 148 LETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYG 190
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q S+ T+GV+F +R+V + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDIT
Sbjct: 33 FKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
SR ++ + W+ +A+ P+ V L G K DL REV+ EA FA +N+++
Sbjct: 92 SRETYNSLAAWLTDARTLASPN-IVVILCGNKKDL---DPEREVTFLEASRFAQENELMF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
ETS+ +G VE AF + I N++ SG+ E GI+ G
Sbjct: 148 LETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYG 190
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q S+ T+GV+F +R+V + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDIT
Sbjct: 33 FKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
SR ++ + W+ +A+ P+ V L G K DL REV+ EA FA +N+++
Sbjct: 92 SRETYNSLAAWLTDARTLASPN-IVVILCGNKKDL---DPEREVTFLEASRFAQENELMF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
ETS+ +G VE AF + I N++ SG+ E GI+ G
Sbjct: 148 LETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYG 190
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
+ Q S+ T+GV+F +R+V + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDIT
Sbjct: 33 FKQDSNHTIGVEFGSRVVNV-GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
SR ++ + W+ +A+ P+ V L G K DL REV+ EA FA +N+++
Sbjct: 92 SRETYNSLAAWLTDARTLASPN-IVVILCGNKKDL---DPEREVTFLEASRFAQENELMF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
ETS+ +G VE AF + I N++ SG+ E GI+ G
Sbjct: 148 LETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYG 190
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S+ T+GV+F ++++ + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDITSR +
Sbjct: 42 SNHTIGVEFGSKIINV-GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRET 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ + W+ +A R + V L G K DL REV+ EA FA +N+++ ETS
Sbjct: 101 YNALTNWLTDA-RMLASQNIVLILCGNKKDL---DADREVTFLEASRFAQENELMFLETS 156
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
+ +G VE AF ++I N+++SG+ E GI+ G
Sbjct: 157 ALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYG 195
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S+ T+GV+F ++++ + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDITSR +
Sbjct: 42 SNHTIGVEFGSKIINV-GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRET 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ + W+ +A R + V L G K DL REV+ EA FA +N+++ ETS
Sbjct: 101 YNALTNWLTDA-RMLASQNIVIILCGNKKDL---DTDREVTFLEASRFAQENELMFLETS 156
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
+ +G VE AF ++I N+++SG+ E GI+ G
Sbjct: 157 ALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYG 195
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S+ T+GV+F ++++ + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDITSR +
Sbjct: 42 SNHTIGVEFGSKIINV-GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRET 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ + W+ +A R + V L G K DL REV+ EA FA +N+++ ETS
Sbjct: 101 YNALTNWLTDA-RMLASQNIVIILCGNKKDL---DADREVTFLEASRFAQENELMFLETS 156
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
+ +G VE AF ++I N+++SG+ E GI+ G
Sbjct: 157 ALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYG 195
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S+ T+GV+F ++++ + G +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDITSR +
Sbjct: 42 SNHTIGVEFGSKIINV-GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRET 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ + W+ +A R + V L G K DL REV+ EA FA +N+++ ETS
Sbjct: 101 YNALTNWLTDA-RMLASQNIVIILCGNKKDL---DADREVTFLEASRFAQENELMFLETS 156
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
+ +G VE AF ++I N+++SG+ E GI+ G
Sbjct: 157 ALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYG 195
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 5/150 (3%)
Query: 8 YIQISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDIT 67
++ S T+GV+F R+V + + +IKLQ+WDTAGQERFR++T+SYYR + GALLVYDIT
Sbjct: 33 FVPDSPHTIGVEFGTRIVDVNN-KKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDIT 91
Query: 68 SRASFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILH 127
R ++ H+ W+ +A+ P+ V L+G K DL R+V+ EA AFA QN ++
Sbjct: 92 RRITYNHLTTWLTDARNLTNPNT-VIMLIGNKKDLEGQ---RDVTYEEASAFAKQNGLIF 147
Query: 128 FETSSRSGFQVENAFTAVTQEIYNRVQSGD 157
E+S+++G VE AF + I+ VQ G+
Sbjct: 148 VESSAKTGENVEEAFLRTAKLIFQSVQEGN 177
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S+ T+GV+F ++++++ + +KLQ+WDTAGQERFRS+T+SYYR + GALLVYDITSR +
Sbjct: 37 SNHTIGVEFGSKIISVVN-KFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRET 95
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ + W+ +A R + V L G K DL REV+ EA FA +N+++ ETS
Sbjct: 96 YNALTNWLTDA-RMLASQNIVIILCGNKKDL---DADREVTFLEASRFAQENELMFLETS 151
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTG 170
+ +G VE AF ++I N+++SG+ E GI+ G
Sbjct: 152 ALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYG 190
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 8/183 (4%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R + + D +IK Q+WDTAGQER+R+IT +YYR +VGAL+VYDIT ++S
Sbjct: 39 SKSTIGVEFATRNIVL-DNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSS 97
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
F+++ W+ E + H + + V LVG K DLL R VS EA+AFA++N++ ETS
Sbjct: 98 FDNVGRWLKELREHADSN-IVIMLVGNKTDLLH---LRAVSTEEAQAFAAENNLSFIETS 153
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRT-NAVLDDDLMLAEPAKS 190
+ VE AF V EI+ V + +E G +G+ +T N + + + + S
Sbjct: 154 AMDASNVEEAFQTVLTEIFRIV--SNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSS 211
Query: 191 SCC 193
CC
Sbjct: 212 QCC 214
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 12/177 (6%)
Query: 17 GVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRASFEHIP 76
G+DF R V + DG RIKLQ+WDTAGQERFR+IT +YYR ++G LLVYD+T +SF +I
Sbjct: 49 GIDFKIRTVEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIR 107
Query: 77 VWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETSSRSGF 136
WM ++H + LVG K D+ +S R V A+ +A A + I FETS+++
Sbjct: 108 NWMKNIEQHASDNVNKI-LVGNKADMDES--KRAVPTAKGQALADEYGIKFFETSAKTNL 164
Query: 137 QVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAKSSCC 193
VEN F ++ ++I R+ D K E +GIK T A + KS+CC
Sbjct: 165 NVENVFMSIAKDIKQRLTETDTKAEP--QGIKITKQDTAA------SSSTAEKSACC 213
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R + + D +K Q+WDTAGQER+R++T +YYR +VGA+LVYDIT R +
Sbjct: 46 SKSTIGVEFQTRTLVI-DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQT 104
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
F+HIP W+ E + H + + V L+G K DL+ R+V +AK FA + + ETS
Sbjct: 105 FDHIPRWLEELRNHADKN-IVIILIGNKCDLVNQ---RDVPTEDAKEFAEKEGLFFLETS 160
Query: 132 SRSGFQVENAFTAVTQEIYNRVQ 154
+ VE+AFT V EIYN V
Sbjct: 161 ALEATNVESAFTTVLTEIYNIVN 183
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 5/146 (3%)
Query: 11 ISDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRA 70
+ D T+GV+F A+ +T+ D IKLQ+WDTAGQE FRS+T+SYYR G LLVYDIT R
Sbjct: 34 VHDLTIGVEFGAKTITI-DNKPIKLQIWDTAGQESFRSVTRSYYRGRAGTLLVYDITRRE 92
Query: 71 SFEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFET 130
+F H+ W+ EA++H + L+G K DL R VS E + FA ++ ++ E
Sbjct: 93 TFNHLASWLEEARQHASENMTTM-LIGNKCDLED---KRTVSTEEGEQFAREHGLIFMEA 148
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSG 156
S+++ VE AF IY R+Q G
Sbjct: 149 SAKTAHNVEEAFVETAATIYKRIQDG 174
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R + + D +K Q+WDTAGQER+R+IT +YYR +VGALLVYD+T +
Sbjct: 42 SKSTIGVEFATRSIHV-DEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVT 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
FE++ W+ E + H E + V LVG K DL R VS +AKAFA + + ETS
Sbjct: 101 FENVERWLKELRDHTEAN-IVIMLVGNKADLRH---LRAVSTEDAKAFAERENTFFMETS 156
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAKSS 191
+ VENAFT V +IY + D + G S DD ++E K
Sbjct: 157 ALEALNVENAFTEVLSQIYRVASKKALDIGDDHTTLPKGQSINVGSKDD---VSEVKKVG 213
Query: 192 CC 193
CC
Sbjct: 214 CC 215
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 5/145 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
SD T+GV+F +R + + D +IKLQ+WDTAGQE+FRSIT++YYR +V A++VYDIT R S
Sbjct: 53 SDFTIGVEFGSRSININD-KQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDS 111
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
FE + W+ + R L+G K DL R+VS +EAK FA +N ++ FETS
Sbjct: 112 FESLNSWLTDC-RKFSSCDVTTVLIGNKADL---EANRQVSTSEAKEFAEKNGLMFFETS 167
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSG 156
+++ V+ AF T++I +++S
Sbjct: 168 AKTALNVDEAFEKSTEQILKKLESN 192
>sp|Q54DA7|RAB4_DICDI Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3
SV=1
Length = 205
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 92/150 (61%), Gaps = 5/150 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GVDF +R+V ++ G +KLQ+WDTAGQERFRS+ SYYR S G LVYD+T+R S
Sbjct: 36 STHTIGVDFSSRVVDIQ-GKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRES 94
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQSGVPREVSEAEAKAFASQNDILHFETS 131
+ HI W+ + K P + LVG K DL + REV+ EA A +N +L ETS
Sbjct: 95 YNHITNWLSDVKSLASPDVTII-LVGNKADLTE---QREVTFLEASRIAQENGLLFMETS 150
Query: 132 SRSGFQVENAFTAVTQEIYNRVQSGDYKVE 161
+ +G VE F T+ I ++ SG+ +E
Sbjct: 151 ALTGEGVEEMFLKCTRTIMTKIDSGEVNLE 180
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 21/189 (11%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R +++ + IK Q+WDTAGQER+R++T +YYR +VGA+LVYD+T R +
Sbjct: 46 SKATIGVEFQTRTLSIEQKS-IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRET 104
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLL-QSGVPREVSEAEAKAFASQNDILHFET 130
FEHIP W+ E + H + + V L+G K DL Q VP E +AK FA + + ET
Sbjct: 105 FEHIPRWLEELRAHADKN-IVIILIGNKSDLEDQRAVPTE----DAKEFAEKEGLFFLET 159
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAE---- 186
S+ + VEN+F + +IYN V + E G S L +L
Sbjct: 160 SALNATNVENSFNTLMTQIYNTVNKKNLASE--------GDSNNPGSLAGKKILIPGSGQ 211
Query: 187 --PAKSSCC 193
PAK+S C
Sbjct: 212 EIPAKTSTC 220
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R + ++ + +K Q+WDTAGQER+R++T +YYR +VGA+LVYDIT R +
Sbjct: 44 SKATIGVEFQTRTLAIQHKS-VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQT 102
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLL-QSGVPREVSEAEAKAFASQNDILHFET 130
F+HIP W+ E + H + V L+G K DL Q VP E +AK FA + + ET
Sbjct: 103 FDHIPRWLEELRAHAD-RNIVIMLIGNKTDLEDQRAVPTE----DAKEFAQKEGLFFLET 157
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEGIKTGFSRTNAVLDDDLMLAEPAKS 190
S+ +E+AF V EI+N V + +D +L P K
Sbjct: 158 SAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKK 217
Query: 191 SCC 193
+CC
Sbjct: 218 ACC 220
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 98/156 (62%), Gaps = 9/156 (5%)
Query: 12 SDPTVGVDFFARLVTMRDGARIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDITSRAS 71
S T+GV+F R + + DG +K Q+WDTAGQER+R+IT +YYR +VGALLVYD+T RA+
Sbjct: 42 SKSTIGVEFATRTLKV-DGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRAT 100
Query: 72 FEHIPVWMMEAKRHIEPHRPVFALVGCKLDLLQ-SGVPREVSEAEAKAFASQNDILHFET 130
FE++ W+ E K H +P+ V LVG K DL VP E + K++A Q + ET
Sbjct: 101 FENVDRWLKELKNHTDPN-IVVMLVGNKSDLRHLLAVPTE----DGKSYAEQESLCFMET 155
Query: 131 SSRSGFQVENAFTAVTQEIYNRVQSGDYKVEDGWEG 166
S+ VE+AF V +IY R+ S +VE G +G
Sbjct: 156 SALEATNVEDAFAEVLTQIY-RITSKK-QVEAGEDG 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,296,023
Number of Sequences: 539616
Number of extensions: 2317517
Number of successful extensions: 7968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 6567
Number of HSP's gapped (non-prelim): 1061
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)