Query psy3800
Match_columns 133
No_of_seqs 128 out of 1060
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 17:48:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1spv_A Putative polyprotein/ph 100.0 1E-31 3.5E-36 205.1 13.6 95 1-101 28-131 (184)
2 2xd7_A Core histone macro-H2A. 100.0 2E-31 6.8E-36 205.0 13.1 95 1-101 47-148 (193)
3 3q6z_A Poly [ADP-ribose] polym 100.0 1.2E-31 4.2E-36 209.6 12.0 96 1-102 62-167 (214)
4 1yd9_A Core histone macro-H2A. 100.0 2.6E-31 8.8E-36 204.4 12.8 96 1-102 44-146 (193)
5 3q71_A Poly [ADP-ribose] polym 100.0 1.9E-31 6.4E-36 209.6 11.9 92 3-100 67-166 (221)
6 2x47_A Macro domain-containing 100.0 6.7E-31 2.3E-35 207.8 13.5 96 1-102 87-188 (235)
7 4abl_A Poly [ADP-ribose] polym 100.0 5.9E-31 2E-35 201.4 10.9 89 1-100 47-135 (183)
8 2dx6_A Hypothetical protein TT 100.0 3.4E-30 1.2E-34 191.9 12.4 97 1-103 27-125 (159)
9 3kh6_A Poly [ADP-ribose] polym 100.0 2.9E-29 1E-33 194.4 11.3 89 1-100 58-146 (199)
10 3eti_A X (ADRP) domain, macro 100.0 8.9E-30 3E-34 192.7 8.0 90 1-102 39-135 (168)
11 1vhu_A Hypothetical protein AF 100.0 5.7E-29 2E-33 193.8 9.3 100 1-103 46-161 (211)
12 3ejf_A Non-structural protein 99.9 5.4E-28 1.8E-32 184.3 10.0 89 1-102 47-142 (176)
13 3gpg_A NSP3, non-structural pr 99.9 3.5E-28 1.2E-32 184.1 6.7 90 1-104 35-130 (168)
14 3gqe_A Non-structural protein 99.9 2.1E-27 7.2E-32 179.8 7.4 90 1-104 29-124 (168)
15 2acf_A Replicase polyprotein 1 99.9 5.1E-27 1.7E-31 179.5 9.3 91 1-104 49-146 (182)
16 3ejg_A Non-structural protein 99.9 2.6E-26 8.8E-31 177.3 10.5 88 1-102 67-160 (193)
17 1njr_A 32.1 kDa protein in ADH 99.9 4.1E-26 1.4E-30 184.9 10.1 94 1-101 83-203 (284)
18 2vri_A Non-structural protein 99.9 4E-25 1.4E-29 167.6 10.0 90 1-104 46-141 (174)
19 4gua_A Non-structural polyprot 99.9 6.7E-25 2.3E-29 190.7 8.7 104 2-126 370-479 (670)
20 2eee_A Uncharacterized protein 99.8 3.9E-21 1.3E-25 141.9 9.8 89 2-102 36-128 (149)
21 2jyc_A Uncharacterized protein 99.8 6.2E-21 2.1E-25 142.8 9.9 90 1-102 46-139 (160)
22 2fg1_A Conserved hypothetical 99.8 9.4E-20 3.2E-24 135.4 10.2 90 2-101 33-136 (158)
23 3sig_A PArg, poly(ADP-ribose) 97.8 2.6E-05 9E-10 62.8 5.3 51 52-102 171-231 (277)
24 3ew7_A LMO0794 protein; Q8Y8U8 70.3 4.4 0.00015 28.6 3.8 42 49-90 61-102 (221)
25 3dhn_A NAD-dependent epimerase 68.1 7 0.00024 27.9 4.5 41 49-89 67-110 (227)
26 3h2s_A Putative NADH-flavin re 62.0 9 0.00031 27.2 4.0 40 49-89 62-103 (224)
27 3e48_A Putative nucleoside-dip 57.1 26 0.0009 25.8 6.1 40 49-89 65-104 (289)
28 2qn6_B Translation initiation 56.8 9.6 0.00033 25.4 3.1 33 51-83 53-86 (93)
29 2jl1_A Triphenylmethane reduct 48.7 41 0.0014 24.6 5.9 40 49-89 66-105 (287)
30 3m2p_A UDP-N-acetylglucosamine 45.4 39 0.0013 25.2 5.4 40 49-88 62-106 (311)
31 4b8w_A GDP-L-fucose synthase; 42.2 47 0.0016 24.2 5.3 39 50-88 62-110 (319)
32 4id9_A Short-chain dehydrogena 37.9 46 0.0016 25.1 4.8 40 49-88 77-123 (347)
33 1hdo_A Biliverdin IX beta redu 36.9 41 0.0014 23.0 4.0 41 49-89 67-109 (206)
34 3ruf_A WBGU; rossmann fold, UD 36.3 50 0.0017 24.9 4.8 40 49-88 100-148 (351)
35 3qvo_A NMRA family protein; st 35.4 71 0.0024 22.9 5.3 35 49-88 88-122 (236)
36 1r6d_A TDP-glucose-4,6-dehydra 33.9 1E+02 0.0034 23.0 6.1 40 49-88 76-124 (337)
37 4egb_A DTDP-glucose 4,6-dehydr 33.6 56 0.0019 24.6 4.7 40 50-89 99-147 (346)
38 3e8x_A Putative NAD-dependent 33.5 72 0.0024 22.7 5.0 40 49-88 84-128 (236)
39 2c5a_A GDP-mannose-3', 5'-epim 33.0 1E+02 0.0035 23.8 6.2 40 49-88 93-142 (379)
40 2c20_A UDP-glucose 4-epimerase 32.9 80 0.0027 23.5 5.4 40 49-88 67-115 (330)
41 3sxp_A ADP-L-glycero-D-mannohe 32.5 84 0.0029 23.9 5.6 39 49-88 90-135 (362)
42 3vps_A TUNA, NAD-dependent epi 32.4 66 0.0023 23.7 4.8 39 49-88 69-116 (321)
43 1gy8_A UDP-galactose 4-epimera 32.0 1E+02 0.0036 23.6 6.1 39 50-88 94-141 (397)
44 2yy7_A L-threonine dehydrogena 32.0 67 0.0023 23.6 4.8 40 49-88 68-115 (312)
45 1e6u_A GDP-fucose synthetase; 31.9 83 0.0028 23.3 5.3 40 49-88 55-104 (321)
46 3dqp_A Oxidoreductase YLBE; al 31.4 26 0.00089 24.8 2.3 41 49-89 63-104 (219)
47 2c29_D Dihydroflavonol 4-reduc 31.1 82 0.0028 23.6 5.2 42 49-90 77-127 (337)
48 2wm3_A NMRA-like family domain 30.6 54 0.0019 24.2 4.1 40 49-88 72-112 (299)
49 2x4g_A Nucleoside-diphosphate- 30.6 64 0.0022 24.1 4.5 40 49-88 77-123 (342)
50 2rh8_A Anthocyanidin reductase 30.2 94 0.0032 23.2 5.4 41 49-89 80-129 (338)
51 1ek6_A UDP-galactose 4-epimera 29.7 96 0.0033 23.2 5.4 40 49-88 81-129 (348)
52 3ius_A Uncharacterized conserv 29.0 60 0.0021 23.7 4.0 37 49-89 63-101 (286)
53 3ajr_A NDP-sugar epimerase; L- 27.9 84 0.0029 23.2 4.7 40 49-88 62-109 (317)
54 3ehe_A UDP-glucose 4-epimerase 27.8 1.2E+02 0.0041 22.4 5.6 40 49-88 63-111 (313)
55 1yz7_A Probable translation in 27.4 46 0.0016 24.7 3.1 34 51-84 136-170 (188)
56 2gn4_A FLAA1 protein, UDP-GLCN 27.4 1.4E+02 0.0046 22.9 6.0 40 49-88 91-139 (344)
57 3enk_A UDP-glucose 4-epimerase 27.4 1.1E+02 0.0037 22.8 5.3 40 49-88 78-126 (341)
58 1sb8_A WBPP; epimerase, 4-epim 27.3 1.4E+02 0.0048 22.5 6.0 40 49-88 102-150 (352)
59 2z1m_A GDP-D-mannose dehydrata 26.7 1.3E+02 0.0044 22.3 5.6 39 50-88 76-124 (345)
60 3ay3_A NAD-dependent epimerase 26.5 96 0.0033 22.4 4.8 40 49-88 63-107 (267)
61 4f6c_A AUSA reductase domain p 25.4 1.4E+02 0.0047 23.4 5.8 39 49-88 150-194 (427)
62 3rft_A Uronate dehydrogenase; 25.3 1E+02 0.0035 22.5 4.8 41 49-89 64-109 (267)
63 3slg_A PBGP3 protein; structur 25.0 94 0.0032 23.6 4.6 47 49-97 91-146 (372)
64 2a35_A Hypothetical protein PA 24.8 87 0.003 21.5 4.1 39 50-88 66-111 (215)
65 2zcu_A Uncharacterized oxidore 24.5 59 0.002 23.6 3.2 38 49-89 65-102 (286)
66 2p5y_A UDP-glucose 4-epimerase 24.3 1.8E+02 0.0062 21.3 6.0 40 49-88 66-114 (311)
67 3oh8_A Nucleoside-diphosphate 24.0 1.3E+02 0.0043 24.7 5.5 48 49-97 201-259 (516)
68 3r6d_A NAD-dependent epimerase 23.6 1.4E+02 0.0048 20.8 5.1 34 49-89 73-106 (221)
69 2vg0_A Short-chain Z-isoprenyl 22.9 1.2E+02 0.0041 22.9 4.8 32 68-99 33-64 (227)
70 2v6g_A Progesterone 5-beta-red 22.3 1.4E+02 0.0049 22.3 5.1 38 50-87 73-116 (364)
71 1y1p_A ARII, aldehyde reductas 22.2 1.3E+02 0.0046 22.1 4.9 40 49-88 83-129 (342)
72 2q1s_A Putative nucleotide sug 22.0 1.6E+02 0.0054 22.6 5.4 40 49-88 99-148 (377)
73 2p4h_X Vestitone reductase; NA 21.9 1.8E+02 0.0061 21.3 5.6 41 49-89 74-123 (322)
74 2bka_A CC3, TAT-interacting pr 21.8 1.1E+02 0.0037 21.6 4.2 40 49-88 84-129 (242)
75 1eq2_A ADP-L-glycero-D-mannohe 21.5 1.5E+02 0.0052 21.5 5.0 38 50-88 69-113 (310)
76 2plx_B Peptide inhibitor; heli 21.2 71 0.0024 16.1 2.1 13 62-74 12-24 (26)
77 1udb_A Epimerase, UDP-galactos 20.9 1.3E+02 0.0045 22.4 4.7 39 50-88 74-121 (338)
78 1vl0_A DTDP-4-dehydrorhamnose 20.4 1.9E+02 0.0066 20.9 5.4 39 49-88 63-110 (292)
No 1
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=99.97 E-value=1e-31 Score=205.09 Aligned_cols=95 Identities=39% Similarity=0.563 Sum_probs=89.5
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC-----CcHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG-----EKPALLKSAY 71 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~-----~~~~~L~~~y 71 (133)
+..+|||++||++++||+|++||+++ +++++|++++|++|+||+ |||||+|||.| .+.+.|++||
T Consensus 28 l~~ggGv~~aI~~aaG~~l~~e~~~~~~~~g~~~~G~a~iT~~~~L~~------k~VIH~vgP~~~~~~~~~~~~L~~~y 101 (184)
T 1spv_A 28 LMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPA------KAVVHTVGPVWRGGEQNEDQLLQDAY 101 (184)
T ss_dssp CSCCSHHHHHHHHHHCHHHHHHHHHHHHHHCSCCTTCEEEECCTTSSS------SEEEEECCCCCSSSSSSHHHHHHHHH
T ss_pred CCCCchHHHHHHHHhCHHHHHHHHHHHHhcCCCCCCCEEEeeCCCCCC------CEEEEEcCCcccCCCcchHHHHHHHH
Confidence 45789999999999999999999987 899999999999999999 99999999999 3578999999
Q ss_pred HHHHHHHHHCCCcEEEEccccccccchHHH
Q psy3800 72 QRSLEVMKQNNLRSILEVMKQNNLRSIDIL 101 (133)
Q Consensus 72 ~~~L~~A~~~~~~SIAfPaigtG~~g~~~~ 101 (133)
+++|++|++++++|||||+||||++|+|..
T Consensus 102 ~~~L~~a~~~~~~SIAfP~IstG~~g~p~~ 131 (184)
T 1spv_A 102 LNSLRLVAANSYTSVAFPAISTGVYGYPRA 131 (184)
T ss_dssp HHHHHHHHHTTCSEEEECCTTSSTTCCCHH
T ss_pred HHHHHHHHHhCCceEEeccccCCCCCCCHH
Confidence 999999999999999999999999999843
No 2
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=204.96 Aligned_cols=95 Identities=21% Similarity=0.237 Sum_probs=89.5
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC---CcHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG---EKPALLKSAYQR 73 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~---~~~~~L~~~y~~ 73 (133)
|..+|||++||++++||+|++||+++ +++++|++++|++|+||| |||||+|||.| .+.+.|++||++
T Consensus 47 l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~~~L~~------k~VIH~vgP~~~~~~~~~~L~~~y~~ 120 (193)
T 2xd7_A 47 IDLKEDIGKALEKAGGKEFLETVKELRKSQGPLEVAEAAVSQSSGLAA------KFVIHCHIPQWGSDKCEEQLEETIKN 120 (193)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTCEEEEECTTSSS------SEEEEEECCCTTSTTHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCeEEeeCCCCCC------CEEEEECCCcCCCcchHHHHHHHHHH
Confidence 46789999999999999999999875 899999999999999999 99999999999 467899999999
Q ss_pred HHHHHHHCCCcEEEEccccccccchHHH
Q psy3800 74 SLEVMKQNNLRSILEVMKQNNLRSIDIL 101 (133)
Q Consensus 74 ~L~~A~~~~~~SIAfPaigtG~~g~~~~ 101 (133)
+|++|++++++|||||+||||++|+|..
T Consensus 121 ~L~~a~~~~~~SIAfP~IstG~~g~p~~ 148 (193)
T 2xd7_A 121 CLSAAEDKKLKSVAFPPFPSGRNCFPKQ 148 (193)
T ss_dssp HHHHHHHTTCSEEEECCCCCSTTCCCHH
T ss_pred HHHHHHHcCCCEEEeccccCCCCCCCHH
Confidence 9999999999999999999999999843
No 3
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=209.59 Aligned_cols=96 Identities=29% Similarity=0.396 Sum_probs=88.9
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCC------cHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGE------KPALLKSA 70 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~------~~~~L~~~ 70 (133)
+..+|||++||+++|||+|++||+++ +++++|++++|++|+||| |||||+|||.|. +.+.|++|
T Consensus 62 l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~~~L~~------k~VIH~VgP~~~~~~~~~~~~~L~~~ 135 (214)
T 3q6z_A 62 LKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKAGKLPY------HHVIHAVGPRWSGYEAPRCVYLLRRA 135 (214)
T ss_dssp CCCCSHHHHHHHHHHCTHHHHHHHHHHHHHCCCCTTCEEEEECTTSSS------SEEEEEECCCCCGGGHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHhhhHHHHHHHHHHHHHcCCCCCCeEEEEcCCCCCC------CEEEEecCCcccCCCcchHHHHHHHH
Confidence 45789999999999999999999876 899999999999999999 999999999992 25789999
Q ss_pred HHHHHHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 71 YQRSLEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 71 y~~~L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
|+++|++|++++++|||||+||||++|||..+
T Consensus 136 y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~ 167 (214)
T 3q6z_A 136 VQLSLCLAEKYKYRSIAIPAISSGVFGFPLGR 167 (214)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTSSTTCCCHHH
T ss_pred HHHHHHHHHHcCCcEEEECcccCCCCCCCHHH
Confidence 99999999999999999999999999998433
No 4
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=99.97 E-value=2.6e-31 Score=204.44 Aligned_cols=96 Identities=23% Similarity=0.288 Sum_probs=89.8
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC---CcHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG---EKPALLKSAYQR 73 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~---~~~~~L~~~y~~ 73 (133)
|..+|||++||++++||+|++||+++ +++++|++++|++|+||| |||||+|||.| .+.+.|++||++
T Consensus 44 l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~~~L~~------k~VIH~vgP~~~~~~~~~~L~~~y~~ 117 (193)
T 1yd9_A 44 FYIGGEVGSTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSAGHGLPA------KFVIHCNSPVWGSDKCEELLEKTVKN 117 (193)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTCEEEEECTTSSS------SEEEEECCCCTTSTTHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEecCCCCCC------CEEEEeCCCCcCCcchHHHHHHHHHH
Confidence 46789999999999999999999875 899999999999999999 99999999999 467899999999
Q ss_pred HHHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 74 SLEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 74 ~L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
+|++|++++++|||||+||||++|+|..+
T Consensus 118 ~L~~a~~~~~~SIAfP~IstG~~g~p~~~ 146 (193)
T 1yd9_A 118 CLALADDRKLKSIAFPSIGSGRNGFPKQT 146 (193)
T ss_dssp HHHHHHHTTCSEEEECCCSBSTTCBCHHH
T ss_pred HHHHHHHhCCceEeecccccCCCCCCHHH
Confidence 99999999999999999999999998433
No 5
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=209.63 Aligned_cols=92 Identities=22% Similarity=0.293 Sum_probs=86.5
Q ss_pred ccchHHHHHHHhhCHHHHHHHHhh---CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCC-----cHHHHHHHHHHH
Q psy3800 3 WREIIDGAIHRAAGPQLKEECRTL---NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGE-----KPALLKSAYQRS 74 (133)
Q Consensus 3 ~~ggVs~AI~~aaG~~l~~ec~~~---~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~-----~~~~L~~~y~~~ 74 (133)
.+|||++||+++|||+|++||+++ +++++|++++|++|+||| |||||+|||.|. +.+.|++||++|
T Consensus 67 ~gGGV~~AI~~aaG~~L~~ec~~~~~~~~~~~G~a~iT~g~~Lp~------k~VIHtVgP~~~~~~~~~~~~L~~~y~~~ 140 (221)
T 3q71_A 67 SRGPLSKSLLEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDC------RYVLHVVAPEWRNGSTSSLKIMEDIIREC 140 (221)
T ss_dssp TSSHHHHHHHHHHCTHHHHHHHHHHHTSCCCTTCEEEEECTTSSS------SEEEEECCCCCTTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhHHHHHHHHHHhccCCCCCCeEEEEcCCCCCC------CEEEEeCCCCCcCCCchHHHHHHHHHHHH
Confidence 468999999999999999999987 489999999999999999 999999999992 458999999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHH
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDI 100 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~ 100 (133)
|++|++++++|||||+||||++|||.
T Consensus 141 L~~A~e~~i~SIAfPaIsTG~~G~P~ 166 (221)
T 3q71_A 141 MEITESLSLKSIAFPAIGTGNLGFPK 166 (221)
T ss_dssp HHHHHHTTCCEEEEECTTSSTTCCCH
T ss_pred HHHHHHhCCceEeeccccCCCCCCCH
Confidence 99999999999999999999999984
No 6
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=207.81 Aligned_cols=96 Identities=46% Similarity=0.720 Sum_probs=90.0
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC------CcHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG------EKPALLKSAYQRS 74 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~------~~~~~L~~~y~~~ 74 (133)
|..+|||++||+++||++|++||++++++++|++++|++|+||| +||||+|||.| .+.+.|++||+++
T Consensus 87 l~~ggGV~~AI~~aaG~~l~~ec~~~g~~~~G~a~iT~~~~L~~------k~VIH~vgP~~~~~~~~~~~~~L~~~y~~~ 160 (235)
T 2x47_A 87 LLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPA------KYVIHTVGPIAYGEPSASQAAELRSCYLSS 160 (235)
T ss_dssp CSCCSHHHHHHHHHHCHHHHHHHHTSCCCCBTCEEEEECTTSSS------SEEEEEBCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHhCHHHHHHHHHhCCCCCCceEEecCCCCCC------CEEEEecCccccCCCCcchHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999 99999999999 2468999999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
|++|++++++|||||+||||++|+|...
T Consensus 161 L~~A~e~~i~SIAfP~IstG~~g~p~~~ 188 (235)
T 2x47_A 161 LDLLLEHRLRSVAFPCISTGVFGYPCEA 188 (235)
T ss_dssp HHHHHHTTCCEEEECCTTCSTTSCCHHH
T ss_pred HHHHHHhCCceEEeccccCCCCCCCHHH
Confidence 9999999999999999999999998433
No 7
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=99.97 E-value=5.9e-31 Score=201.39 Aligned_cols=89 Identities=24% Similarity=0.256 Sum_probs=85.3
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCCcHHHHHHHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQ 80 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~ 80 (133)
+..+|||++||+++|||+|++||++++++++|++++|++|+||| |||||+|||.| |++||+++|++|++
T Consensus 47 l~~ggGV~~aI~~aaG~~l~~ec~~~~~~~~G~a~iT~~~~L~~------k~VIH~vgP~~-----L~~~y~~~L~~a~~ 115 (183)
T 4abl_A 47 FNLKAGVSKAILECAGQNVERECSQQAQQRKNDYIITGGGFLRC------KNIIHVIGGND-----VKSSVSSVLQECEK 115 (183)
T ss_dssp SCCCSTHHHHHHHHHCHHHHHHHHHHHHHSCCSEEEEECTTSBS------SEEEEEETTSC-----HHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHhhHHHHHHHHHhcCCCCCceEEecCCCCCC------CEEEEeCcHHH-----HHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999 99999999975 99999999999999
Q ss_pred CCCcEEEEccccccccchHH
Q psy3800 81 NNLRSILEVMKQNNLRSIDI 100 (133)
Q Consensus 81 ~~~~SIAfPaigtG~~g~~~ 100 (133)
++++|||||+||||++|||.
T Consensus 116 ~~~~SIAfP~IstG~~g~p~ 135 (183)
T 4abl_A 116 KNYSSICLPAIGTGNAKQHP 135 (183)
T ss_dssp TTCCEEEECCTTSSTTCCCH
T ss_pred cCCCeEeeccccCCCCCcCH
Confidence 99999999999999999984
No 8
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=99.97 E-value=3.4e-30 Score=191.91 Aligned_cols=97 Identities=23% Similarity=0.340 Sum_probs=91.2
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC--CcHHHHHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG--EKPALLKSAYQRSLEVM 78 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~--~~~~~L~~~y~~~L~~A 78 (133)
+.++|||++||++++|+++++||++++++++|++++|++++||+ +||||+|||.| .+.+.|++||+++|++|
T Consensus 27 l~~ggGv~~aI~~~~G~~l~~~c~~~g~~~~G~a~it~~~~L~~------~~Vih~vgp~~~~~~~~~L~~~~~~~L~~a 100 (159)
T 2dx6_A 27 LKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPV------RYVIHAAVLGDEPASLETVRKATKSALEKA 100 (159)
T ss_dssp CCCCSTTHHHHHHHHCTHHHHHHHHHCCCCTTCEEEEECTTSSS------SEEEEEEEESSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHhCHHHHHHHHhcCCCCCCcEEEecCCCCCC------CEEEEEeCCCCCCchHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999 99999999999 56889999999999999
Q ss_pred HHCCCcEEEEccccccccchHHHhh
Q psy3800 79 KQNNLRSILEVMKQNNLRSIDILKG 103 (133)
Q Consensus 79 ~~~~~~SIAfPaigtG~~g~~~~~~ 103 (133)
++++++|||||+||||++|+|..+.
T Consensus 101 ~~~~~~sIa~P~igtG~~g~p~~~~ 125 (159)
T 2dx6_A 101 VELGLKTVAFPLLGTGVGGLPVEAV 125 (159)
T ss_dssp HHTTCSEEEECCTTSSTTCCCHHHH
T ss_pred HHcCCcEEEECCccCCCCCCCHHHH
Confidence 9999999999999999999984433
No 9
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=99.96 E-value=2.9e-29 Score=194.38 Aligned_cols=89 Identities=22% Similarity=0.213 Sum_probs=85.1
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCCcHHHHHHHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQ 80 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~ 80 (133)
+..+|||++||+++||+++++||++++++++|++++|++|+||| |||||+|||. .|++||+++|++|++
T Consensus 58 l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~~G~a~iT~g~~L~~------k~VIH~vgp~-----~L~~~y~~~L~~a~~ 126 (199)
T 3kh6_A 58 FNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKC------KIIIHVPGGK-----DVRKTVTSVLEECEQ 126 (199)
T ss_dssp SCCCSTHHHHHHHHHCHHHHHHHHHHHTSCCCSSEEEECTTSSS------SEEEEEETTS-----CHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHhhHHHHHHHHHhCCCCCCeEEEecCCCCCC------CEEEEeCCCH-----HHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999 9999999995 599999999999999
Q ss_pred CCCcEEEEccccccccchHH
Q psy3800 81 NNLRSILEVMKQNNLRSIDI 100 (133)
Q Consensus 81 ~~~~SIAfPaigtG~~g~~~ 100 (133)
++++|||||+||||++|+|.
T Consensus 127 ~~i~SIAfP~IgtG~~G~p~ 146 (199)
T 3kh6_A 127 RKYTSVSLPAIGTGNAGKNP 146 (199)
T ss_dssp TTCCEEEECCTTSSTTCCCH
T ss_pred cCCCEEeecccccCCCCcCH
Confidence 99999999999999999984
No 10
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=99.96 E-value=8.9e-30 Score=192.73 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=82.5
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC---CcHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG---EKPALLKSAYQR 73 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~---~~~~~L~~~y~~ 73 (133)
|..+|||++||+++|||+|++||+++ +++++|++++|+|| ||+ +||||+|||.| ++.++|++||++
T Consensus 39 l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~g~-l~~------~~VIHtVgP~~~~~~~~~~L~~~y~~ 111 (168)
T 3eti_A 39 LRHVGGVARAIDVFTGGKLTKRSKEYLKSSKAIAPGNAVLFENV-LEH------LSVMNAVGPRNGDSRVEGKLCNVYKA 111 (168)
T ss_dssp CCCCSTTHHHHHHHTTTHHHHHHHHHHTTSCCCCTTEEEEEEEE-ETT------EEEEEEECCCTTSTTHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEecCC-CCc------cEEEEecCCCCCcchHHHHHHHHHHH
Confidence 46789999999999999999999986 89999999999999 999 99999999999 457899999999
Q ss_pred HHHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 74 SLEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 74 ~L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
+|+. .+|||||+||||+||||..+
T Consensus 112 ~L~~-----~~SIAfP~IstG~~g~P~~~ 135 (168)
T 3eti_A 112 IAKC-----DGKILTPLISVGIFKVKLEV 135 (168)
T ss_dssp HHTS-----CSCEEECCTTBSTTCBCHHH
T ss_pred HHHh-----cCceeecccccCCCCCCHHH
Confidence 9975 38999999999999999433
No 11
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=99.96 E-value=5.7e-29 Score=193.76 Aligned_cols=100 Identities=23% Similarity=0.219 Sum_probs=91.3
Q ss_pred CcccchHHHHHHHhhC----HHHHHHHHh----hCC--CCCCcEEEccCCCCCCCCCCCCceEEEeeCC----CC--CcH
Q psy3800 1 MVWREIIDGAIHRAAG----PQLKEECRT----LNG--CETGDAKITAGYNLPAKLPINAKHVIHTVGP----VG--EKP 64 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG----~~l~~ec~~----~~~--~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP----~~--~~~ 64 (133)
|.++|||++||++++| |++++||++ +++ +++|++++|++|+||+ +|+|||||+||| .| .+.
T Consensus 46 l~~ggGV~~aI~~aaG~~~~~~l~~ec~~~~~~~g~~~~~~G~a~iT~~~~L~~---~g~k~VIH~vgP~~~~~~~~~~~ 122 (211)
T 1vhu_A 46 LEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDYIDHGEVVVTPAMNLEE---RGIKYVFHTVGPICSGMWSEELK 122 (211)
T ss_dssp CCCCSHHHHHHHHHHHSSHHHHHHHHHHHHHHHHSSSCCCTTCCEEEECGGGGG---GTCCEEEEEECCCCTTCCCHHHH
T ss_pred ccCccHHHHHHHHHhCCCchHHHHHHHHHHHHHcCCCcccCCcEEEEECCCCCc---cCcCEEEEecCCccccccCcchH
Confidence 4578999999999999 999999988 577 9999999999999997 566999999999 88 467
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEEccccccccchHHHhh
Q psy3800 65 ALLKSAYQRSLEVMKQNNLRSILEVMKQNNLRSIDILKG 103 (133)
Q Consensus 65 ~~L~~~y~~~L~~A~~~~~~SIAfPaigtG~~g~~~~~~ 103 (133)
+.|++||+++|++|++++++|||||+||||++|+|....
T Consensus 123 ~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~a 161 (211)
T 1vhu_A 123 EKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKV 161 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHH
Confidence 899999999999999999999999999999999984333
No 12
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=99.95 E-value=5.4e-28 Score=184.34 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=82.1
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC---CcHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG---EKPALLKSAYQR 73 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~---~~~~~L~~~y~~ 73 (133)
|..+|||++|||++|||+|++||+++ ++++ +++|.|++|++ ++|||+|||.| +++++|++||++
T Consensus 47 L~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~---a~iT~G~~l~t------~~VIHtVGP~~~~~~~~~~L~~~y~~ 117 (176)
T 3ejf_A 47 MTHGSGVAKAIADFCGLDFVEYCEDYVKKHGPQQ---RLVTPSFVKGI------QCVNNVVGPRHGDNNLHEKLVAAYKN 117 (176)
T ss_dssp CCCCSHHHHHHHHHHCHHHHHHHHHHHHHHCCCS---EEEECCCSTTE------EEEEEECCCCTTCSCHHHHHHHHHHT
T ss_pred cCCCchHHHHHHHHhhHHHHHHHHHHHHhcCCCC---eeecccccccC------CEEEEeCCCCCCCccHHHHHHHHHHH
Confidence 45789999999999999999999876 7777 99999999999 99999999999 567899999999
Q ss_pred HHHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 74 SLEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 74 ~L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
+|+ ++++|||||+||||+||||..+
T Consensus 118 ~L~----~~~~SIAfPaIstGi~g~P~~~ 142 (176)
T 3ejf_A 118 VLV----DGVVNYVVPVLSLGIFGVDFKM 142 (176)
T ss_dssp TCC----TTCCEEEEECCCTTSTTCCHHH
T ss_pred HHH----cCCcEEEECccccCCCCCCHHH
Confidence 998 9999999999999999999543
No 13
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=99.95 E-value=3.5e-28 Score=184.10 Aligned_cols=90 Identities=17% Similarity=0.070 Sum_probs=80.2
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCC------cHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGE------KPALLKSAYQRS 74 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~------~~~~L~~~y~~~ 74 (133)
|..+|||++||+++||+++ +.+++++|++++|+++ | |||||+|||.|. +.++|++||+++
T Consensus 35 l~~ggGV~~aI~~aaG~~l-----~~~~~~~G~a~iT~~~---~------k~VIHtVGP~~~~~~~~~~~~~L~~~y~~~ 100 (168)
T 3gpg_A 35 GLPGDGVCKAVYKKWPESF-----KNSATPVGTAKTVMCG---T------YPVIHAVGPNFSNYSESEGDRELAAAYREV 100 (168)
T ss_dssp CCCCSHHHHHHHHHCGGGG-----TTCCCCTTCEEEEEET---T------EEEEEECCCCTTTSCHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHhhHHh-----hcCCCCCCCEEEecCC---C------CEEEEeCCCCcCCCCcchHHHHHHHHHHHH
Confidence 4678999999999999976 3689999999999994 7 999999999991 257899999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHHHhhh
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDILKGR 104 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~~~~~ 104 (133)
|++|++++++|||||+||||+||||..+.+
T Consensus 101 L~~A~~~~~~SIAfP~IstGi~g~P~~~aa 130 (168)
T 3gpg_A 101 AKEVTRLGVNSVAIPLLSTGVYSGGKDRLT 130 (168)
T ss_dssp HHHHHHHTCSEEEEECTTSSTTSTTSCCHH
T ss_pred HHHHHHhCCcEEEECccccCCCCCCHHHHH
Confidence 999999999999999999999999854433
No 14
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=99.94 E-value=2.1e-27 Score=179.76 Aligned_cols=90 Identities=24% Similarity=0.286 Sum_probs=80.0
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCCC------cHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVGE------KPALLKSAYQRS 74 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~~------~~~~L~~~y~~~ 74 (133)
|..+|||++||++++|++++ .+++++|++++|++ ++ |||||+|||.|. +.+.|++||+++
T Consensus 29 l~~ggGV~~aI~~aaG~~l~-----~~~~~~G~a~iT~~---~~------k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~ 94 (168)
T 3gqe_A 29 GQPGGGVCGALYKKFPESFD-----LQPIEVGKARLVKG---AA------KHIIHAVGPNFNKVSEVEGDKQLAEAYESI 94 (168)
T ss_dssp SCCTTGGGSHHHHHCGGGCC-----CCCCCTTCEEEECC---TT------CCEEEEECCCTTTSCHHHHHHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHhhHHhc-----CCCcCCCcEEEEcC---CC------CEEEEcCCCccCCCCchhHHHHHHHHHHHH
Confidence 45789999999999999763 68999999999998 47 999999999992 257899999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHHHhhh
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDILKGR 104 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~~~~~ 104 (133)
|++|++++++|||||+||||+||||..+.+
T Consensus 95 L~~a~~~~~~SIAfP~IstG~~g~p~~~aa 124 (168)
T 3gqe_A 95 AKIVNDNNYKSVAIPLLSTGIFSGNKDRLT 124 (168)
T ss_dssp HHHHHHTTCSEEEEECTTSSTTSCSSCCHH
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCHHHHH
Confidence 999999999999999999999999954443
No 15
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=99.94 E-value=5.1e-27 Score=179.50 Aligned_cols=91 Identities=24% Similarity=0.348 Sum_probs=81.7
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC---CcHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG---EKPALLKSAYQR 73 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~---~~~~~L~~~y~~ 73 (133)
|..+|||++||+++||++|++||+++ +++++|++++|++|+|| +||||+|||.| ++++.|++||++
T Consensus 49 l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~~~L~-------~~VIH~vgP~~~~~~~~~~L~~~y~~ 121 (182)
T 2acf_A 49 LKHGGGVAGALNKATNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLA-------KKCLHVVGPNLNAGEDIQLLKAAYEN 121 (182)
T ss_dssp CCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCCCCTTCEEEEECTTTC-------SEEEEECCCCGGGTCCTTHHHHHHHG
T ss_pred CCCCchHHHHHHHHhCHHHHHHHHHHHHHcCCCCCCcEEEeeCCCCC-------ceEEEECCCCCCCCchHHHHHHHHHH
Confidence 46789999999999999999999864 89999999999999995 68999999999 567899999998
Q ss_pred HHHHHHHCCCcEEEEccccccccchHHHhhh
Q psy3800 74 SLEVMKQNNLRSILEVMKQNNLRSIDILKGR 104 (133)
Q Consensus 74 ~L~~A~~~~~~SIAfPaigtG~~g~~~~~~~ 104 (133)
+ ++++|||||+||||++|||..+.+
T Consensus 122 ~------~~~~SIAfP~IstGi~G~p~~~aa 146 (182)
T 2acf_A 122 F------NSQDILLAPLLSAGIFGAKPLQSL 146 (182)
T ss_dssp G------GGSSEEEECCTTCGGGCCCHHHHH
T ss_pred h------cCCCEEEECCcccCCCCCCHHHHH
Confidence 6 799999999999999999954433
No 16
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=99.93 E-value=2.6e-26 Score=177.31 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=79.6
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC--CcHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG--EKPALLKSAYQRS 74 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~--~~~~~L~~~y~~~ 74 (133)
|..+|||++||+++||++|++||+++ +++++|++++|++|+| ||||+|||.| ++.++|++||+++
T Consensus 67 L~~ggGV~~AI~~aaG~~l~~ec~~l~~~~g~~~~G~a~iT~~~~L---------~VIHtVGP~~~~~~~~~L~~~y~~~ 137 (193)
T 3ejg_A 67 LAHGGGLAKALDVYTKGKLQRLSKEHIGLAGKVKVGTGVMVECDSL---------RIFNVVGPRKGKHERDLLIKAYNTI 137 (193)
T ss_dssp CCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTTCEEEEEETTE---------EEEEEECCCSSTTHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEecCCCe---------eEEEecCCCCCchHHHHHHHHHHHH
Confidence 46789999999999999999999875 8999999999999986 8999999999 4678999999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
|+. .+|||||+||||++|||..+
T Consensus 138 L~~-----~~SIAfPaIstGi~G~P~~~ 160 (193)
T 3ejg_A 138 NNE-----QGTPLTPILSCGIFGIKLET 160 (193)
T ss_dssp HHS-----SSCEEECCTTCGGGCCCHHH
T ss_pred HHh-----cCceeecccccCCCCCCHHH
Confidence 973 37999999999999999433
No 17
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=99.93 E-value=4.1e-26 Score=184.94 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=85.2
Q ss_pred CcccchHHHHHHHhhC-HHHHHHHHhh---CCCCCCcEEEccCC----------CCCCCCCCCCceEEEeeCCCC--C--
Q psy3800 1 MVWREIIDGAIHRAAG-PQLKEECRTL---NGCETGDAKITAGY----------NLPAKLPINAKHVIHTVGPVG--E-- 62 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG-~~l~~ec~~~---~~~~~G~~viT~~~----------~L~~~~~~~~k~IIH~VgP~~--~-- 62 (133)
+..+|||++||++++| +.+++||++. +.+++|++++|+++ +||| |||||+|||.| .
T Consensus 83 l~~gGGVd~AI~raaGg~~l~~ec~~~~~~g~~~~G~a~iT~~~~~~~~~~~~~~L~~------k~VIHtvgp~~~~~~~ 156 (284)
T 1njr_A 83 GYLGGGFDKALYNYFGGKPFETWFRNQLGGRYHTVGSATVVDLQRCLEEKTIECRDGI------RYIIHVPTVVAPSAPI 156 (284)
T ss_dssp CCCCSSHHHHHHHHHTSHHHHHHHHHHTTTSCCCTTCCEEEEGGGGGCC----CCTTE------EEEEECCCBSCSSSCS
T ss_pred CCCCchHHHHHHHhhCcHHHHHHHHHHHhcCCCCCCeEEEEECCcccccccchhcCCC------CEEEEeCCCccCCCCC
Confidence 3578999999999965 7889999884 88999999999999 9999 99999999998 2
Q ss_pred ---------cHHHHHHHHHHHHHHHHHCCCcEEEEccccccccchHHH
Q psy3800 63 ---------KPALLKSAYQRSLEVMKQNNLRSILEVMKQNNLRSIDIL 101 (133)
Q Consensus 63 ---------~~~~L~~~y~~~L~~A~~~~~~SIAfPaigtG~~g~~~~ 101 (133)
..+.|++||+++|++| +++++|||||+||||++|+|..
T Consensus 157 ~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv~G~P~~ 203 (284)
T 1njr_A 157 FNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGYAGVPPI 203 (284)
T ss_dssp CCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCSTTCCCHH
T ss_pred cccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccCCCCCHH
Confidence 2488999999999999 9999999999999999999843
No 18
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=99.92 E-value=4e-25 Score=167.58 Aligned_cols=90 Identities=19% Similarity=0.186 Sum_probs=79.7
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhh----CCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC--CcHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTL----NGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG--EKPALLKSAYQRS 74 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~----~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~--~~~~~L~~~y~~~ 74 (133)
|.++|||++||++++||+|++||+++ +++++|++++|++++| ||||+|||.| ++.+.|++||+++
T Consensus 46 l~~ggGv~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~~~l---------~VIH~vgP~~~~~~~~~L~~~y~~~ 116 (174)
T 2vri_A 46 LLHGGGVARAIDILTEGQLQSLSKDYISSNGPLKVGAGVMLECEKF---------NVFNVVGPRTGKHEHSLLVEAYNSI 116 (174)
T ss_dssp CCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTTCEEEEECSSC---------EEEEEECCCSSTTHHHHHHHHHHHH
T ss_pred CCCCCcHhHHHHHHhhHHHHHHHHHHHHhcCCCCCCeEEEEECCCC---------EEEEEcCCCCCcchHHHHHHHHHHH
Confidence 56789999999999999999999874 8999999999999874 9999999999 3578999999999
Q ss_pred HHHHHHCCCcEEEEccccccccchHHHhhh
Q psy3800 75 LEVMKQNNLRSILEVMKQNNLRSIDILKGR 104 (133)
Q Consensus 75 L~~A~~~~~~SIAfPaigtG~~g~~~~~~~ 104 (133)
|+. + +|||||+||||++|+|..+.+
T Consensus 117 L~~---~--~SIAfP~IstG~~g~p~~~aa 141 (174)
T 2vri_A 117 LFE---N--GIPLMPLLSCGIFGVRIENSL 141 (174)
T ss_dssp HHS---S--SCEEEECSSCGGGCCCHHHHH
T ss_pred Hhh---C--CcEEeCccccCCCCCCHHHHH
Confidence 985 3 499999999999999854433
No 19
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=99.91 E-value=6.7e-25 Score=190.65 Aligned_cols=104 Identities=25% Similarity=0.326 Sum_probs=87.4
Q ss_pred cccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCCC------CcHHHHHHHHHHHH
Q psy3800 2 VWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPVG------EKPALLKSAYQRSL 75 (133)
Q Consensus 2 ~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~~------~~~~~L~~~y~~~L 75 (133)
+.+|||++|||++||+++.+ +.+++|++++|+++ . |||||+|||+| +..++|++||+++|
T Consensus 370 ~gGgGVdGAIhraaG~~ll~-----~~~~tG~AkIT~g~---a------KyIIHtVGPvw~~g~~~E~~~lLascYrnsL 435 (670)
T 4gua_A 370 RPGEGVCRAIYKRWPTSFTD-----SATETGTARMTVCL---G------KKVIHAVGPDFRKHPEAEALKLLQNAYHAVA 435 (670)
T ss_dssp CCCSSHHHHHHHHCGGGGTT-----CCCCTTCEEEEEET---T------EEEEEECCCCTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCcCCHhHHHHHHhhHHHhc-----CCCCcceEEEecCC---C------ceEEEcCCCCccCCCCchHHHHHHHHHHHHH
Confidence 56899999999999998765 57899999999999 5 99999999999 23468999999999
Q ss_pred HHHHHCCCcEEEEccccccccchHHHhhhhhhHHHHHhhhhhhhhhhhcCE
Q psy3800 76 EVMKQNNLRSILEVMKQNNLRSIDILKGRQQKWRYRLCMTFSRNILIRGQM 126 (133)
Q Consensus 76 ~~A~~~~~~SIAfPaigtG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (133)
++|.+++++|||||+||||+|||| |+. ..+.++-++.+|.+++|
T Consensus 436 kLA~e~~~kSIAFPLISTGIYG~P--Kda-----l~IAl~~I~~fL~~~D~ 479 (670)
T 4gua_A 436 DLVNEHNIKSVAIPLLSTGIYAAG--KDR-----LEVSLNCLTTALDRTDA 479 (670)
T ss_dssp HHHHHTTCSEEEECCTTSSSTTTT--SCC-----HHHHHHHHHHHHTTSSC
T ss_pred HHHHHcCCcEEEEccccccCCCCC--HHH-----HHHHHHHHHHHHhccCC
Confidence 999999999999999999999998 553 23444555556655543
No 20
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.85 E-value=3.9e-21 Score=141.89 Aligned_cols=89 Identities=8% Similarity=0.014 Sum_probs=79.1
Q ss_pred cccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCC-C---CcHHHHHHHHHHHHHH
Q psy3800 2 VWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPV-G---EKPALLKSAYQRSLEV 77 (133)
Q Consensus 2 ~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~-~---~~~~~L~~~y~~~L~~ 77 (133)
+|++||++||+++++ ++ +||++ +.+++|++++|+++ + +||||+++|. | .+.+.|++||+++++.
T Consensus 36 ~~G~Gva~ai~~~~p-~~-~~~~~-~~~~~G~a~it~~~---~------~~Vih~v~~~~~~~~~~~~~l~~~l~~~l~~ 103 (149)
T 2eee_A 36 RMGAGIAVLFKKKFG-GV-QELLN-QQKKSGEVAVLKRD---G------RYIYYLITKKRASHKPTYENLQKSLEAMKSH 103 (149)
T ss_dssp CCCSTTHHHHHHHTC-CH-HHHHT-TCCCTTCEEEEESS---S------SEEEEEEEESSTTSCCCHHHHHHHHHHHHHH
T ss_pred CcCCcHHHHHHHHCc-HH-HHHhc-ccCCCccEEEEEcC---C------CEEEEEEecCCCCCCCCHHHHHHHHHHHHHH
Confidence 689999999999995 45 57765 68999999999984 5 9999999998 6 5678999999999999
Q ss_pred HHHCCCcEEEEccccccccchHHHh
Q psy3800 78 MKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 78 A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
|++++++|||||+||||++|+|..+
T Consensus 104 a~~~~~~sIa~P~IgtG~~G~~~~~ 128 (149)
T 2eee_A 104 CLKNGVTDLSMPRIGCGLDRLQWEN 128 (149)
T ss_dssp HHHHTCCEEECCCCCCTTTTCCHHH
T ss_pred HHHcCCCEEEeCCCCCCCCCCCHHH
Confidence 9999999999999999999998443
No 21
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.84 E-value=6.2e-21 Score=142.80 Aligned_cols=90 Identities=8% Similarity=0.008 Sum_probs=79.9
Q ss_pred CcccchHHHHHHHhhCHHHHHHHHhhCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCC-C---CcHHHHHHHHHHHHH
Q psy3800 1 MVWREIIDGAIHRAAGPQLKEECRTLNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPV-G---EKPALLKSAYQRSLE 76 (133)
Q Consensus 1 ~~~~ggVs~AI~~aaG~~l~~ec~~~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~-~---~~~~~L~~~y~~~L~ 76 (133)
.+|+|||++||++++|. + +||++ +.+++|++++|+++ . +||||++||. | .+.+.|++||+++++
T Consensus 46 ~~~GgGVa~ai~~~~p~-~-~e~~~-~~~~~G~a~it~~~---~------~~Vih~vg~~~~~~~~~~~~l~~~l~~~l~ 113 (160)
T 2jyc_A 46 CRMGAGIAVLFKKKFGG-V-QELLN-QQKKSGEVAVLKRD---G------RYIYYLITKKRASHKPTYENLQKSLEAMKS 113 (160)
T ss_dssp CCCCSSTHHHHHHHHCC-H-HHHHH-HCCCTTCEEEEEET---T------EEEEEEECSSSTTSCCCHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHChH-H-HHHhc-cCCCCCcEEEEecC---C------cEEEEEecCCCCCCCChHHHHHHHHHHHHH
Confidence 36899999999999955 4 57876 58999999999984 5 9999999998 6 678899999999999
Q ss_pred HHHHCCCcEEEEccccccccchHHHh
Q psy3800 77 VMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 77 ~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
.|++++++|||||+||||++|+|..+
T Consensus 114 ~a~~~~~~sIa~P~IgtGi~G~p~~~ 139 (160)
T 2jyc_A 114 HCLKNGVTDLSMPRIGCGLDRLQWEN 139 (160)
T ss_dssp HHHHHTCCEEEEESCCSSCSSSCHHH
T ss_pred HHHHcCCCEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999998443
No 22
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.81 E-value=9.4e-20 Score=135.36 Aligned_cols=90 Identities=10% Similarity=-0.014 Sum_probs=79.1
Q ss_pred cccchHHHHHHHhhCHHHHHHHHh----hCCCCCCcEEEccCCCCCCCCCCCCceEEEeeCCC-C---C------cHHHH
Q psy3800 2 VWREIIDGAIHRAAGPQLKEECRT----LNGCETGDAKITAGYNLPAKLPINAKHVIHTVGPV-G---E------KPALL 67 (133)
Q Consensus 2 ~~~ggVs~AI~~aaG~~l~~ec~~----~~~~~~G~~viT~~~~L~~~~~~~~k~IIH~VgP~-~---~------~~~~L 67 (133)
+|++||++||++++ |++++++++ .+++++|++++|+++ +. +||||+++|. | . ..+.|
T Consensus 33 ~~G~Gva~ai~~~~-p~~~~~~~~~~~~~~~~~~G~~~i~~~~--~~------~~Vi~~v~~~~~~~~~~~~~~~~~~~l 103 (158)
T 2fg1_A 33 GWGKGFVLALSKKW-KMPEEAYRQWYKSQEEFTLGAVQFVNVE--NK------LYVANMIGQHGIYKDSKGLPPIRYDAV 103 (158)
T ss_dssp CCCSTHHHHHHHHC-SHHHHHHHHHHHHTSSCSTTCEEEEEEE--TT------EEEEEEEEESSSSCCTTCCCSBCHHHH
T ss_pred CcCccHHHHHHHHC-ChHHHHHHHHHhhccCcCCccEEEEecC--CC------eEEEEEEEEcccCCCCCCCccccHHHH
Confidence 68999999999999 777777554 578999999999985 24 8999999998 6 1 58899
Q ss_pred HHHHHHHHHHHHHCCCcEEEEccccccccchHHH
Q psy3800 68 KSAYQRSLEVMKQNNLRSILEVMKQNNLRSIDIL 101 (133)
Q Consensus 68 ~~~y~~~L~~A~~~~~~SIAfPaigtG~~g~~~~ 101 (133)
++||+++++.|++++. |||||.||||++|+|..
T Consensus 104 ~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~ 136 (158)
T 2fg1_A 104 RQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWE 136 (158)
T ss_dssp HHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHH
T ss_pred HHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHH
Confidence 9999999999999997 99999999999999843
No 23
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=97.78 E-value=2.6e-05 Score=62.75 Aligned_cols=51 Identities=12% Similarity=0.102 Sum_probs=44.6
Q ss_pred eEEEeeCCCC----------CcHHHHHHHHHHHHHHHHHCCCcEEEEccccccccchHHHh
Q psy3800 52 HVIHTVGPVG----------EKPALLKSAYQRSLEVMKQNNLRSILEVMKQNNLRSIDILK 102 (133)
Q Consensus 52 ~IIH~VgP~~----------~~~~~L~~~y~~~L~~A~~~~~~SIAfPaigtG~~g~~~~~ 102 (133)
-||.++.|++ +..+.|++.++++|..|.++|+++|++||+|+|+||.|...
T Consensus 171 ~vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCGvfgnpp~~ 231 (277)
T 3sig_A 171 AFLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCGVFGNDPAQ 231 (277)
T ss_dssp EEEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHH
T ss_pred EEEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCcCCCCHHH
Confidence 4788888987 23578999999999999999999999999999999998433
No 24
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=70.30 E-value=4.4 Score=28.63 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=31.2
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEEcc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILEVM 90 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAfPa 90 (133)
+++.|||++|+.......-....++.++.+.+.+.+.+-+..
T Consensus 61 ~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp TCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 469999999986533334456678888888888888887754
No 25
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=68.07 E-value=7 Score=27.90 Aligned_cols=41 Identities=22% Similarity=0.288 Sum_probs=27.2
Q ss_pred CCceEEEeeCCCCCcH---HHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKP---ALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~---~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||++++.+... +.-.....+.++.+.+.+.+.+-+-
T Consensus 67 ~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 67 GADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp TCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 5799999999976221 1124456778888888999877763
No 26
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=62.03 E-value=9 Score=27.16 Aligned_cols=40 Identities=5% Similarity=0.056 Sum_probs=29.5
Q ss_pred CCceEEEeeCCCC--CcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVG--EKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~--~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||++|+.| .....-....++.++.|.+.+ +.+-+.
T Consensus 62 ~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~ 103 (224)
T 3h2s_A 62 SVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFI 103 (224)
T ss_dssp TCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEE
T ss_pred cCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 4699999999976 333445556788888888888 776664
No 27
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=57.07 E-value=26 Score=25.81 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=29.3
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||++++...... -....++.++.|.+.+++.|-+-
T Consensus 65 ~~d~vi~~a~~~~~~~~-~~~~~~~l~~aa~~~gv~~iv~~ 104 (289)
T 3e48_A 65 GMDTVVFIPSIIHPSFK-RIPEVENLVYAAKQSGVAHIIFI 104 (289)
T ss_dssp TCSEEEECCCCCCSHHH-HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEeCCCCccchh-hHHHHHHHHHHHHHcCCCEEEEE
Confidence 67999999998642222 23456788999999999887763
No 28
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=56.80 E-value=9.6 Score=25.36 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=28.9
Q ss_pred ceEEEeeCCCC-CcHHHHHHHHHHHHHHHHHCCC
Q psy3800 51 KHVIHTVGPVG-EKPALLKSAYQRSLEVMKQNNL 83 (133)
Q Consensus 51 k~IIH~VgP~~-~~~~~L~~~y~~~L~~A~~~~~ 83 (133)
+|+|.+.+|++ ...+.|+++...+.+..+++|.
T Consensus 53 ~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG 86 (93)
T 2qn6_B 53 RYRVDVVGTNPKEASEALNQIISNLIKIGKEENV 86 (93)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999 7888999999998888887764
No 29
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=48.70 E-value=41 Score=24.59 Aligned_cols=40 Identities=13% Similarity=0.239 Sum_probs=28.6
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+++.+.. +.--...++.++.|.+.+++.+-+.
T Consensus 66 ~~d~vi~~a~~~~~~-~~n~~~~~~l~~a~~~~~~~~~v~~ 105 (287)
T 2jl1_A 66 GVSKLLFISGPHYDN-TLLIVQHANVVKAARDAGVKHIAYT 105 (287)
T ss_dssp TCSEEEECCCCCSCH-HHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCEEEEcCCCCcCc-hHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 569999999986432 1122456788888999999877664
No 30
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=45.41 E-value=39 Score=25.22 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=28.0
Q ss_pred CCceEEEeeCCCC-----CcHHHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-----EKPALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-----~~~~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.=-...++.++.|.+.+++.+-+
T Consensus 62 ~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~ 106 (311)
T 3m2p_A 62 DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVY 106 (311)
T ss_dssp TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5699999998743 111222344678888899999987766
No 31
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=42.16 E-value=47 Score=24.20 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=26.5
Q ss_pred CceEEEeeCCCC------CcH-HHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 50 AKHVIHTVGPVG------EKP-ALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~------~~~-~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
++.|||++++.. +.. +.++ ...++.++.|.+.+++.+-+
T Consensus 62 ~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~ 110 (319)
T 4b8w_A 62 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVS 110 (319)
T ss_dssp CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 599999998742 121 2222 23467888899999988776
No 32
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=37.88 E-value=46 Score=25.11 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=27.6
Q ss_pred CCceEEEeeCCCC---Cc-HHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG---EK-PALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~~-~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. .. ...+. ....+.++.|.+.+++.|-+
T Consensus 77 ~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~ 123 (347)
T 4id9_A 77 GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVF 123 (347)
T ss_dssp TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 5799999998754 11 11211 23567888888999988777
No 33
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=36.85 E-value=41 Score=23.04 Aligned_cols=41 Identities=12% Similarity=0.259 Sum_probs=27.5
Q ss_pred CCceEEEeeCCCC--CcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVG--EKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~--~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+++.. +..+.-.....+.++.+.+.+.+.+-+.
T Consensus 67 ~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 67 GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 5699999998743 1111223456777888888888887764
No 34
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=36.33 E-value=50 Score=24.93 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=26.9
Q ss_pred CCceEEEeeCCCC------CcHHHH---HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALL---KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L---~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.+ -....+.++.|.+.+++.+-+
T Consensus 100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~ 148 (351)
T 3ruf_A 100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 148 (351)
T ss_dssp TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5699999999743 111111 233567788888999987776
No 35
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=35.39 E-value=71 Score=22.87 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=26.8
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++. .+....+++++.+.+.+.+.|-+
T Consensus 88 ~~D~vv~~a~~~-----~~~~~~~~~~~~~~~~~~~~iV~ 122 (236)
T 3qvo_A 88 GQDIVYANLTGE-----DLDIQANSVIAAMKACDVKRLIF 122 (236)
T ss_dssp TCSEEEEECCST-----THHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCC-----chhHHHHHHHHHHHHcCCCEEEE
Confidence 679999999884 22345668888888899888776
No 36
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=33.89 E-value=1e+02 Score=23.04 Aligned_cols=40 Identities=8% Similarity=0.132 Sum_probs=27.0
Q ss_pred CCceEEEeeCCCC------CcHHHH---HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALL---KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L---~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.. +..+.+ -....+.++.|.+.+.+.|-+
T Consensus 76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~ 124 (337)
T 1r6d_A 76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVH 124 (337)
T ss_dssp TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999998753 111222 134567888888888877765
No 37
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=33.65 E-value=56 Score=24.60 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=25.9
Q ss_pred CceEEEeeCCCC-----CcHH-HH---HHHHHHHHHHHHHCCCcEEEEc
Q psy3800 50 AKHVIHTVGPVG-----EKPA-LL---KSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 50 ~k~IIH~VgP~~-----~~~~-~L---~~~y~~~L~~A~~~~~~SIAfP 89 (133)
++.|||++++.. +..+ .+ -....+.++.|.+.+++.+-+-
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~ 147 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQV 147 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEE
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 699999998753 1111 11 1235778888999999887763
No 38
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.51 E-value=72 Score=22.67 Aligned_cols=40 Identities=5% Similarity=0.102 Sum_probs=26.9
Q ss_pred CCceEEEeeCCCC-CcHHHH----HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-EKPALL----KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-~~~~~L----~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+|+.. +..+.. -....+.++.|.+.+.+.|-+
T Consensus 84 ~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 128 (236)
T 3e8x_A 84 SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIM 128 (236)
T ss_dssp TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999999754 222221 123567778888888888776
No 39
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=33.05 E-value=1e+02 Score=23.79 Aligned_cols=40 Identities=13% Similarity=0.264 Sum_probs=26.6
Q ss_pred CCceEEEeeCCCC------CcHHH-HH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPAL-LK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~-L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+. ++ ....+.++.|.+.+++.+-+
T Consensus 93 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~ 142 (379)
T 2c5a_A 93 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 142 (379)
T ss_dssp TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999998642 11222 21 24567888888889877766
No 40
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=32.93 E-value=80 Score=23.47 Aligned_cols=40 Identities=18% Similarity=0.116 Sum_probs=26.6
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.++ ....+.++.|.+.+.+.+-+
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 115 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIF 115 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEE
Confidence 5699999999753 1111121 34567778888888887766
No 41
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=32.54 E-value=84 Score=23.94 Aligned_cols=39 Identities=13% Similarity=0.277 Sum_probs=26.1
Q ss_pred CCceEEEeeCCCC---C-cHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG---E-KPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~-~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.- + ....+. ....+.++.|.+.+.+ |-+
T Consensus 90 ~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~ 135 (362)
T 3sxp_A 90 HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIY 135 (362)
T ss_dssp CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEE
T ss_pred CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEE
Confidence 5799999998642 2 222232 4556788888888987 444
No 42
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=32.39 E-value=66 Score=23.66 Aligned_cols=39 Identities=8% Similarity=0.061 Sum_probs=27.1
Q ss_pred CCceEEEeeCCCC---------CcHHHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG---------EKPALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~---------~~~~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||+++... ...+ =-...++.++.|.+.+++.+-+
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~ 116 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVV 116 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEE
Confidence 4699999998643 1112 2344577888888889888776
No 43
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=31.97 E-value=1e+02 Score=23.56 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=26.1
Q ss_pred CceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 50 AKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
++.|||.+++.. +..+.+. ....+.++.|.+.+.+.|-+
T Consensus 94 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~ 141 (397)
T 1gy8_A 94 IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIF 141 (397)
T ss_dssp CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEE
Confidence 699999999753 1111221 34566778888888888776
No 44
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=31.96 E-value=67 Score=23.63 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=26.2
Q ss_pred CCceEEEeeCCCC-----CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-----EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-----~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.++ ....+.++.|.+.+++.+-+
T Consensus 68 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 115 (312)
T 2yy7_A 68 KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFW 115 (312)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEEC
T ss_pred CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4699999998742 1111111 34567788888888877766
No 45
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=31.91 E-value=83 Score=23.26 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=26.7
Q ss_pred CCceEEEeeCCCC-------CcHHHH---HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-------EKPALL---KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-------~~~~~L---~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.+ -...++.++.|.+.+++.+-+
T Consensus 55 ~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 104 (321)
T 1e6u_A 55 RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 104 (321)
T ss_dssp CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 5699999998752 111112 134567888888889877666
No 46
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=31.45 E-value=26 Score=24.81 Aligned_cols=41 Identities=7% Similarity=0.174 Sum_probs=26.1
Q ss_pred CCceEEEeeCCCCCc-HHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEK-PALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~-~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+|+.... .+.=.....+.++.|.+.+.+.|-+.
T Consensus 63 ~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 104 (219)
T 3dqp_A 63 GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILL 104 (219)
T ss_dssp TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEE
Confidence 579999999875310 00011224567777788898887763
No 47
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=31.12 E-value=82 Score=23.59 Aligned_cols=42 Identities=14% Similarity=0.312 Sum_probs=26.7
Q ss_pred CCceEEEeeCCCC---CcHH--HHH---HHHHHHHHHHHHCC-CcEEEEcc
Q psy3800 49 NAKHVIHTVGPVG---EKPA--LLK---SAYQRSLEVMKQNN-LRSILEVM 90 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~~~~--~L~---~~y~~~L~~A~~~~-~~SIAfPa 90 (133)
+++.|||.++|.- .+.. .++ ....+.++.|.+.+ .+.|-+-.
T Consensus 77 ~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S 127 (337)
T 2c29_D 77 GCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127 (337)
T ss_dssp TCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred CCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence 5799999998742 2211 222 34567777787766 78877643
No 48
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=30.62 E-value=54 Score=24.22 Aligned_cols=40 Identities=5% Similarity=-0.117 Sum_probs=27.7
Q ss_pred CCceEEEeeCCCC-CcHHHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-EKPALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-~~~~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.- ...+.-....++.++.|.+.+++.|.+
T Consensus 72 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 72 GAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp TCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999997521 111222345678888888889999888
No 49
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=30.57 E-value=64 Score=24.12 Aligned_cols=40 Identities=18% Similarity=0.037 Sum_probs=22.4
Q ss_pred CCceEEEeeCCCC---CcH----HHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG---EKP----ALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~~~----~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +.. +.=-....+.++.|.+.+++.+-+
T Consensus 77 ~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 123 (342)
T 2x4g_A 77 GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILY 123 (342)
T ss_dssp TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEE
T ss_pred CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 5799999998632 111 111234567788888888877666
No 50
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=30.20 E-value=94 Score=23.21 Aligned_cols=41 Identities=17% Similarity=0.412 Sum_probs=25.5
Q ss_pred CCceEEEeeCCCC---CcH-H-HHH---HHHHHHHHHHHHCC-CcEEEEc
Q psy3800 49 NAKHVIHTVGPVG---EKP-A-LLK---SAYQRSLEVMKQNN-LRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~~~-~-~L~---~~y~~~L~~A~~~~-~~SIAfP 89 (133)
+++.|||.++|.- .+. + .++ ....+.++.|.+.+ ++.|-+-
T Consensus 80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~ 129 (338)
T 2rh8_A 80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILT 129 (338)
T ss_dssp TCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEE
Confidence 5799999998742 111 1 222 34567778888875 8887763
No 51
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=29.69 E-value=96 Score=23.20 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=26.2
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.+. ....+.++.|.+.+.+.|-+
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 129 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVF 129 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4699999999753 1111221 34566777888888887766
No 52
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.97 E-value=60 Score=23.67 Aligned_cols=37 Identities=8% Similarity=0.104 Sum_probs=24.3
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHH--CCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQ--NNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~--~~~~SIAfP 89 (133)
+++.|||++++...... ..++.++.+.+ .+++.+-+.
T Consensus 63 ~~d~vi~~a~~~~~~~~----~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 63 GVTHLLISTAPDSGGDP----VLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp TCCEEEECCCCBTTBCH----HHHHHHHHHHHTGGGCSEEEEE
T ss_pred CCCEEEECCCccccccH----HHHHHHHHHHhhcCCceEEEEe
Confidence 56999999998642211 23556666666 677777663
No 53
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=27.86 E-value=84 Score=23.18 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=26.1
Q ss_pred CCceEEEeeCCCC-----CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-----EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-----~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.. +..+.++ ....+.++.|.+.+.+.+-+
T Consensus 62 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 109 (317)
T 3ajr_A 62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVI 109 (317)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEE
Confidence 4699999998742 1111111 23467788888889877766
No 54
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=27.80 E-value=1.2e+02 Score=22.36 Aligned_cols=40 Identities=28% Similarity=0.383 Sum_probs=26.1
Q ss_pred CCceEEEeeCCCC-----CcH-HHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-----EKP-ALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-----~~~-~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.. +.. +.+. ....+.++.+.+.+.+.+-+
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~ 111 (313)
T 3ehe_A 63 GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVF 111 (313)
T ss_dssp TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 5799999998532 222 2222 24456777788888887776
No 55
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=27.40 E-value=46 Score=24.70 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=29.2
Q ss_pred ceEEEeeCCCC-CcHHHHHHHHHHHHHHHHHCCCc
Q psy3800 51 KHVIHTVGPVG-EKPALLKSAYQRSLEVMKQNNLR 84 (133)
Q Consensus 51 k~IIH~VgP~~-~~~~~L~~~y~~~L~~A~~~~~~ 84 (133)
+|+|.+.+|++ ...+.|.++...+.+...++|-.
T Consensus 136 ~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~ 170 (188)
T 1yz7_A 136 RYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGE 170 (188)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 79999999998 78889999999999888877643
No 56
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=27.39 E-value=1.4e+02 Score=22.94 Aligned_cols=40 Identities=10% Similarity=0.152 Sum_probs=26.6
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||+++... ...+.++ ....+.++.|.+.+++.|-+
T Consensus 91 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~ 139 (344)
T 2gn4_A 91 GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIA 139 (344)
T ss_dssp TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 5699999998753 1112222 22367788888899888766
No 57
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.35 E-value=1.1e+02 Score=22.81 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=26.4
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.++... ...+.++ ....+.++.+.+.+.+.|-+
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 126 (341)
T 3enk_A 78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVF 126 (341)
T ss_dssp CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4699999998753 1112221 23456778888888888776
No 58
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=27.35 E-value=1.4e+02 Score=22.49 Aligned_cols=40 Identities=10% Similarity=0.100 Sum_probs=26.4
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.++ ....+.++.|.+.+.+.+-+
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~ 150 (352)
T 1sb8_A 102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY 150 (352)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5699999999753 1111121 33467788888888887766
No 59
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=26.75 E-value=1.3e+02 Score=22.28 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=23.9
Q ss_pred CceEEEeeCCCC-----CcHHHHH----HHHHHHHHHHHHCCC-cEEEE
Q psy3800 50 AKHVIHTVGPVG-----EKPALLK----SAYQRSLEVMKQNNL-RSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~-----~~~~~L~----~~y~~~L~~A~~~~~-~SIAf 88 (133)
++.|||.+++.. +..+... ....+.++.|.+.+. +.|-+
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~ 124 (345)
T 2z1m_A 76 PDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQ 124 (345)
T ss_dssp CSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 599999999753 2222222 235667777777775 55554
No 60
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=26.53 E-value=96 Score=22.43 Aligned_cols=40 Identities=15% Similarity=0.048 Sum_probs=26.1
Q ss_pred CCceEEEeeCCCC-CcH-HHH---HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-EKP-ALL---KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-~~~-~~L---~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.. +.. ..+ -....+.++.+.+.+.+.|-+
T Consensus 63 ~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 107 (267)
T 3ay3_A 63 DCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVF 107 (267)
T ss_dssp TCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 5799999998743 221 111 123467777888888877766
No 61
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=25.41 E-value=1.4e+02 Score=23.42 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=24.1
Q ss_pred CCceEEEeeCCCC--C----cHHHHHHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG--E----KPALLKSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~--~----~~~~L~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. . ..+.=-...+++++.|.+ +.+.+-+
T Consensus 150 ~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~ 194 (427)
T 4f6c_A 150 NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIY 194 (427)
T ss_dssp CCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEE
T ss_pred CCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5799999998753 1 111122345677777877 6666655
No 62
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=25.32 E-value=1e+02 Score=22.48 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCceEEEeeCCCC-Cc-HHHHH---HHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVG-EK-PALLK---SAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~-~~-~~~L~---~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+|... +. ++.++ ....+.++.|.+.+.+.|-+-
T Consensus 64 ~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~ 109 (267)
T 3rft_A 64 GCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109 (267)
T ss_dssp TCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 5799999998754 22 22222 334567777888888888773
No 63
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=25.04 E-value=94 Score=23.63 Aligned_cols=47 Identities=4% Similarity=0.040 Sum_probs=27.6
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEEccccccccc
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILEVMKQNNLRS 97 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAfPaigtG~~g 97 (133)
+++.|||+++... +..+.++ ....+.++.|.+.+ +.+-+-.= +++||
T Consensus 91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS-~~vyg 146 (372)
T 3slg_A 91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST-SEVYG 146 (372)
T ss_dssp HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC-GGGGB
T ss_pred cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc-HHHhC
Confidence 5699999998653 1112222 12267788888888 76665332 33444
No 64
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.82 E-value=87 Score=21.54 Aligned_cols=39 Identities=8% Similarity=-0.095 Sum_probs=26.1
Q ss_pred CceEEEeeCCCC---CcHHHH----HHHHHHHHHHHHHCCCcEEEE
Q psy3800 50 AKHVIHTVGPVG---EKPALL----KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~---~~~~~L----~~~y~~~L~~A~~~~~~SIAf 88 (133)
++.|||.+++.. +..+.. .....+.++.+.+.+.+.+-+
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 111 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLV 111 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEE
Confidence 499999999753 122221 234567778888888887766
No 65
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=24.54 E-value=59 Score=23.58 Aligned_cols=38 Identities=5% Similarity=0.022 Sum_probs=23.2
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+++... .. -...++.++.|.+.+++.+-+-
T Consensus 65 ~~d~vi~~a~~~~~--~~-~~~~~~l~~a~~~~~~~~~v~~ 102 (286)
T 2zcu_A 65 GVEKLLLISSSEVG--QR-APQHRNVINAAKAAGVKFIAYT 102 (286)
T ss_dssp TCSEEEECC-----------CHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEeCCCCch--HH-HHHHHHHHHHHHHcCCCEEEEE
Confidence 56999999987431 11 2345777888888888877663
No 66
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=24.31 E-value=1.8e+02 Score=21.34 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=25.6
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+++.. +....++ ....+.++.|.+.+.+.|-+
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~ 114 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVF 114 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4699999998753 1111221 23457778888888877665
No 67
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=24.02 E-value=1.3e+02 Score=24.67 Aligned_cols=48 Identities=8% Similarity=0.112 Sum_probs=28.3
Q ss_pred CCceEEEeeCCC----C--CcHHHHH----HHHHHHHHH-HHHCCCcEEEEccccccccc
Q psy3800 49 NAKHVIHTVGPV----G--EKPALLK----SAYQRSLEV-MKQNNLRSILEVMKQNNLRS 97 (133)
Q Consensus 49 ~~k~IIH~VgP~----~--~~~~~L~----~~y~~~L~~-A~~~~~~SIAfPaigtG~~g 97 (133)
+++.|||++++. | +..+.+. ....+.++. +.+.+.+.+-+-. |++.||
T Consensus 201 ~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S-S~~vyg 259 (516)
T 3oh8_A 201 GADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS-AVGFYG 259 (516)
T ss_dssp TCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE-EGGGGC
T ss_pred CCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC-cceEec
Confidence 679999999874 2 1222222 235667776 5667787776632 344555
No 68
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.62 E-value=1.4e+02 Score=20.80 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=26.2
Q ss_pred CCceEEEeeCCCCCcHHHHHHHHHHHHHHHHHCCCcEEEEc
Q psy3800 49 NAKHVIHTVGPVGEKPALLKSAYQRSLEVMKQNNLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP 89 (133)
+++.|||.+|+. .+. .+++++.+.+.+.+.|-+.
T Consensus 73 ~~d~vv~~ag~~-----n~~--~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 73 NAEVVFVGAMES-----GSD--MASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp TCSEEEESCCCC-----HHH--HHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEcCCCC-----Chh--HHHHHHHHHhcCCCeEEEE
Confidence 569999999984 222 7888888888898877653
No 69
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=22.89 E-value=1.2e+02 Score=22.93 Aligned_cols=32 Identities=6% Similarity=-0.026 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHCCCcEEEEccccccccchH
Q psy3800 68 KSAYQRSLEVMKQNNLRSILEVMKQNNLRSID 99 (133)
Q Consensus 68 ~~~y~~~L~~A~~~~~~SIAfPaigtG~~g~~ 99 (133)
.+.+++.++.|.+.|++.+++=+.||+++.-|
T Consensus 33 ~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp 64 (227)
T 2vg0_A 33 AAKIAEMLRWCHEAGIELATVYLLSTENLQRD 64 (227)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETGGGGSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecccccCCC
Confidence 46788888899999999999999999998765
No 70
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=22.26 E-value=1.4e+02 Score=22.34 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=25.3
Q ss_pred CceEEEeeCCCCCcHHH-H---HHHHHHHHHHHHHC--CCcEEE
Q psy3800 50 AKHVIHTVGPVGEKPAL-L---KSAYQRSLEVMKQN--NLRSIL 87 (133)
Q Consensus 50 ~k~IIH~VgP~~~~~~~-L---~~~y~~~L~~A~~~--~~~SIA 87 (133)
++.|||++++.....+. . -....+.++.|.+. +++.+-
T Consensus 73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v 116 (364)
T 2v6g_A 73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116 (364)
T ss_dssp CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence 69999999875422222 2 23456777888877 777765
No 71
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=22.24 E-value=1.3e+02 Score=22.12 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=25.3
Q ss_pred CCceEEEeeCCCC---CcHHHHH---HHHHHHHHHHH-HCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG---EKPALLK---SAYQRSLEVMK-QNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~---~~~~~L~---~~y~~~L~~A~-~~~~~SIAf 88 (133)
+++.|||.+++.. +..+.++ ....+.++.|. ..+.+.|-+
T Consensus 83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~ 129 (342)
T 1y1p_A 83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129 (342)
T ss_dssp TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEE
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 6799999998754 2222222 33456777776 357777766
No 72
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=21.96 E-value=1.6e+02 Score=22.55 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=26.3
Q ss_pred CCceEEEeeCCCC-----CcHHHH----HHHHHHHHHHHHHC-CCcEEEE
Q psy3800 49 NAKHVIHTVGPVG-----EKPALL----KSAYQRSLEVMKQN-NLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~-----~~~~~L----~~~y~~~L~~A~~~-~~~SIAf 88 (133)
+++.|||++++.. +..+.. -....+.++.|.+. +++.+-+
T Consensus 99 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~ 148 (377)
T 2q1s_A 99 EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVY 148 (377)
T ss_dssp CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEE
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 6799999999753 111111 13456778888888 8877665
No 73
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=21.90 E-value=1.8e+02 Score=21.31 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=24.8
Q ss_pred CCceEEEeeCCC-C--Cc-H-HHHH---HHHHHHHHHHHHC-CCcEEEEc
Q psy3800 49 NAKHVIHTVGPV-G--EK-P-ALLK---SAYQRSLEVMKQN-NLRSILEV 89 (133)
Q Consensus 49 ~~k~IIH~VgP~-~--~~-~-~~L~---~~y~~~L~~A~~~-~~~SIAfP 89 (133)
+++.|||.++|. + .. . +.+. ....++++.|.+. +.+.|-+-
T Consensus 74 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~ 123 (322)
T 2p4h_X 74 GCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYT 123 (322)
T ss_dssp TCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEE
T ss_pred CCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 579999999874 2 11 1 1222 3456677777776 77777653
No 74
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=21.83 E-value=1.1e+02 Score=21.58 Aligned_cols=40 Identities=10% Similarity=0.100 Sum_probs=25.6
Q ss_pred CCceEEEeeCCCC--CcH-HHH---HHHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG--EKP-ALL---KSAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~--~~~-~~L---~~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||.+|+.. ... ..+ .....+.++.+.+.+.++|-+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~ 129 (242)
T 2bka_A 84 GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNL 129 (242)
T ss_dssp SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEE
Confidence 5799999999753 111 111 123456777788888887766
No 75
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=21.51 E-value=1.5e+02 Score=21.54 Aligned_cols=38 Identities=8% Similarity=0.039 Sum_probs=23.6
Q ss_pred CceEEEeeCCCC---CcHHHHH----HHHHHHHHHHHHCCCcEEEE
Q psy3800 50 AKHVIHTVGPVG---EKPALLK----SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~---~~~~~L~----~~y~~~L~~A~~~~~~SIAf 88 (133)
++.|||++++.. ...+... ....+.++.|.+.+. .+-+
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~ 113 (310)
T 1eq2_A 69 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLY 113 (310)
T ss_dssp CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEE
T ss_pred CcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEE
Confidence 599999998753 2222222 235677778877777 4443
No 76
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=21.19 E-value=71 Score=16.12 Aligned_cols=13 Identities=23% Similarity=0.519 Sum_probs=10.2
Q ss_pred CcHHHHHHHHHHH
Q psy3800 62 EKPALLKSAYQRS 74 (133)
Q Consensus 62 ~~~~~L~~~y~~~ 74 (133)
.+.++|++|..||
T Consensus 12 sspellrrcldnc 24 (26)
T 2plx_B 12 SSPELLRRCLDNC 24 (26)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcc
Confidence 4668899888876
No 77
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=20.93 E-value=1.3e+02 Score=22.35 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=24.1
Q ss_pred CceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 50 AKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 50 ~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
++.|||.+++.. ...+.+. ....++++.+.+.+.+.|-+
T Consensus 74 ~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 121 (338)
T 1udb_A 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121 (338)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 599999998643 1111121 23456677777778877665
No 78
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=20.42 E-value=1.9e+02 Score=20.89 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=23.4
Q ss_pred CCceEEEeeCCCC------CcHHHHH---HHHHHHHHHHHHCCCcEEEE
Q psy3800 49 NAKHVIHTVGPVG------EKPALLK---SAYQRSLEVMKQNNLRSILE 88 (133)
Q Consensus 49 ~~k~IIH~VgP~~------~~~~~L~---~~y~~~L~~A~~~~~~SIAf 88 (133)
+++.|||++++.. +..+.+. ....+.++.|.+.+. .+-+
T Consensus 63 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~ 110 (292)
T 1vl0_A 63 KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQ 110 (292)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEE
T ss_pred CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEE
Confidence 4699999999753 1111111 234677777877776 4443
Done!