Query psy3807
Match_columns 483
No_of_seqs 416 out of 3517
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 17:56:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3807.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3807hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 2.8E-39 6.1E-44 313.6 36.2 350 105-482 5-433 (485)
2 KOG0254|consensus 99.9 2.3E-25 4.9E-30 226.7 28.9 292 184-481 92-459 (513)
3 TIGR01299 synapt_SV2 synaptic 99.9 3.6E-23 7.8E-28 214.3 26.0 295 161-479 188-710 (742)
4 PRK10077 xylE D-xylose transpo 99.9 5.5E-22 1.2E-26 201.2 31.9 326 108-477 9-424 (479)
5 TIGR00887 2A0109 phosphate:H+ 99.9 9.9E-23 2.1E-27 207.3 25.3 281 184-479 59-454 (502)
6 PF00083 Sugar_tr: Sugar (and 99.9 9.9E-28 2.1E-32 241.3 -18.8 291 181-481 46-413 (451)
7 TIGR00879 SP MFS transporter, 99.9 1.5E-20 3.2E-25 190.4 32.8 294 183-481 73-447 (481)
8 KOG0253|consensus 99.9 1.3E-21 2.9E-26 177.8 20.0 289 159-473 97-490 (528)
9 KOG0252|consensus 99.9 9.6E-22 2.1E-26 184.2 9.3 165 301-478 294-467 (538)
10 PRK12307 putative sialic acid 99.8 4.9E-19 1.1E-23 176.8 24.6 288 160-481 38-385 (426)
11 COG2271 UhpC Sugar phosphate p 99.8 6.7E-20 1.4E-24 171.1 15.3 288 160-481 49-411 (448)
12 PRK10642 proline/glycine betai 99.8 3.4E-18 7.3E-23 173.5 28.5 313 112-481 17-406 (490)
13 TIGR00891 2A0112 putative sial 99.8 1.3E-18 2.9E-23 172.3 24.8 299 160-481 32-392 (405)
14 TIGR00898 2A0119 cation transp 99.8 6E-19 1.3E-23 180.2 20.6 280 164-474 113-467 (505)
15 PRK11551 putative 3-hydroxyphe 99.8 2.9E-18 6.3E-23 170.1 22.4 272 162-481 37-372 (406)
16 PRK10406 alpha-ketoglutarate t 99.8 1.4E-17 3E-22 166.4 24.9 165 300-481 234-400 (432)
17 TIGR02332 HpaX 4-hydroxyphenyl 99.8 6.9E-18 1.5E-22 167.3 22.4 291 160-481 28-397 (412)
18 PRK11663 regulatory protein Uh 99.8 1.3E-17 2.8E-22 166.7 21.9 283 163-481 46-401 (434)
19 PRK09952 shikimate transporter 99.8 3.2E-17 7E-22 163.9 24.1 139 330-480 267-407 (438)
20 TIGR00893 2A0114 d-galactonate 99.8 4.5E-18 9.9E-23 167.6 16.2 294 160-481 14-375 (399)
21 PRK15075 citrate-proton sympor 99.8 2.1E-17 4.6E-22 165.2 21.0 143 327-481 252-396 (434)
22 TIGR00895 2A0115 benzoate tran 99.8 1.6E-17 3.4E-22 164.1 19.3 285 161-476 38-397 (398)
23 TIGR00903 2A0129 major facilit 99.8 3.1E-17 6.7E-22 159.5 20.4 265 158-477 9-340 (368)
24 PRK09556 uhpT sugar phosphate 99.8 3.4E-17 7.4E-22 165.2 20.4 136 329-478 274-411 (467)
25 TIGR00890 2A0111 Oxalate/Forma 99.8 3.8E-17 8.2E-22 160.1 19.2 273 161-481 24-359 (377)
26 PRK03893 putative sialic acid 99.7 1.3E-16 2.9E-21 162.5 20.2 136 332-481 294-430 (496)
27 PRK11273 glpT sn-glycerol-3-ph 99.7 7.5E-16 1.6E-20 154.8 23.6 138 330-481 270-412 (452)
28 PRK14995 methyl viologen resis 99.7 1.3E-15 2.7E-20 154.8 24.2 291 163-479 29-413 (495)
29 TIGR00881 2A0104 phosphoglycer 99.7 3.4E-17 7.3E-22 160.6 12.3 292 161-481 16-374 (379)
30 TIGR00900 2A0121 H+ Antiporter 99.7 5.5E-16 1.2E-20 151.2 20.6 260 184-481 37-365 (365)
31 TIGR00711 efflux_EmrB drug res 99.7 2.7E-16 6E-21 159.8 19.1 294 161-479 23-410 (485)
32 PRK03545 putative arabinose tr 99.7 1.7E-15 3.7E-20 149.4 22.4 267 164-481 33-357 (390)
33 COG2814 AraJ Arabinose efflux 99.7 3.3E-15 7.1E-20 141.8 21.9 269 163-481 36-363 (394)
34 PRK09705 cynX putative cyanate 99.7 1.7E-15 3.6E-20 149.4 20.3 269 163-482 32-358 (393)
35 KOG0569|consensus 99.7 2.3E-16 4.9E-21 154.2 12.2 207 1-256 139-378 (485)
36 TIGR00896 CynX cyanate transpo 99.7 3.8E-15 8.2E-20 145.0 20.7 137 329-482 213-351 (355)
37 TIGR00883 2A0106 metabolite-pr 99.7 8.1E-15 1.8E-19 144.5 23.3 168 299-481 208-377 (394)
38 TIGR00897 2A0118 polyol permea 99.7 7.8E-15 1.7E-19 145.2 22.2 163 301-481 215-378 (402)
39 TIGR00899 2A0120 sugar efflux 99.7 1.5E-14 3.3E-19 141.8 23.0 266 160-481 18-351 (375)
40 TIGR00712 glpT glycerol-3-phos 99.7 5.5E-15 1.2E-19 148.0 19.2 142 329-481 267-410 (438)
41 PRK10504 putative transporter; 99.7 1.7E-14 3.8E-19 146.0 22.9 161 303-481 256-417 (471)
42 PRK09528 lacY galactoside perm 99.7 4.7E-15 1E-19 147.8 18.3 160 301-481 216-380 (420)
43 PRK05122 major facilitator sup 99.6 2.3E-14 4.9E-19 141.9 21.6 134 330-481 233-366 (399)
44 PRK10489 enterobactin exporter 99.6 1.9E-14 4.2E-19 143.2 20.6 135 332-482 242-377 (417)
45 KOG0255|consensus 99.6 5.6E-14 1.2E-18 144.0 24.3 266 184-476 121-465 (521)
46 PRK03699 putative transporter; 99.6 2.3E-14 5.1E-19 141.5 20.6 264 164-481 31-357 (394)
47 PRK12382 putative transporter; 99.6 2.3E-14 5.1E-19 141.4 20.6 134 330-481 233-366 (392)
48 TIGR00710 efflux_Bcr_CflA drug 99.6 4E-14 8.6E-19 139.3 21.1 264 164-475 29-357 (385)
49 PRK10213 nepI ribonucleoside t 99.6 7.8E-14 1.7E-18 137.5 23.0 265 164-482 44-369 (394)
50 PF07690 MFS_1: Major Facilita 99.6 8.2E-15 1.8E-19 142.2 15.0 267 162-470 19-352 (352)
51 PRK03633 putative MFS family t 99.6 1.6E-13 3.5E-18 134.9 24.1 159 300-482 192-350 (381)
52 TIGR00902 2A0127 phenyl propri 99.6 5.4E-14 1.2E-18 138.2 20.4 270 160-481 25-357 (382)
53 PLN00028 nitrate transmembrane 99.6 4.8E-14 1E-18 142.4 20.5 126 332-474 271-404 (476)
54 TIGR00882 2A0105 oligosacchari 99.6 2.2E-14 4.7E-19 141.8 17.7 161 300-481 207-372 (396)
55 PRK10091 MFS transport protein 99.6 7.5E-14 1.6E-18 137.2 20.8 264 164-481 27-352 (382)
56 TIGR00894 2A0114euk Na(+)-depe 99.6 3E-14 6.4E-19 144.0 17.3 271 184-479 79-422 (465)
57 cd06174 MFS The Major Facilita 99.6 1.2E-13 2.6E-18 133.8 20.4 138 328-481 190-329 (352)
58 PRK10054 putative transporter; 99.6 9.1E-14 2E-18 137.1 19.3 271 159-482 27-362 (395)
59 PRK11043 putative transporter; 99.6 1.5E-13 3.2E-18 136.2 20.7 268 166-479 32-357 (401)
60 PRK15402 multidrug efflux syst 99.6 2.4E-13 5.1E-18 134.9 20.3 273 166-482 39-373 (406)
61 TIGR00892 2A0113 monocarboxyla 99.6 7.9E-14 1.7E-18 140.1 16.6 135 331-481 259-397 (455)
62 PRK11128 putative 3-phenylprop 99.6 3E-13 6.5E-18 133.0 20.2 272 160-481 25-357 (382)
63 PRK10473 multidrug efflux syst 99.6 2.6E-13 5.6E-18 134.0 19.5 260 164-481 27-351 (392)
64 PRK11102 bicyclomycin/multidru 99.6 3E-13 6.5E-18 132.8 19.5 261 165-472 16-342 (377)
65 PRK15011 sugar efflux transpor 99.6 8.4E-13 1.8E-17 130.3 22.7 133 332-481 235-368 (393)
66 PRK15034 nitrate/nitrite trans 99.6 7.9E-13 1.7E-17 130.1 22.1 166 300-481 244-430 (462)
67 PRK10133 L-fucose transporter; 99.5 3.6E-13 7.9E-18 134.4 20.2 158 300-481 250-409 (438)
68 TIGR00889 2A0110 nucleoside tr 99.5 4.9E-13 1.1E-17 132.7 20.6 164 301-481 201-373 (418)
69 PRK09874 drug efflux system pr 99.5 1.1E-12 2.4E-17 130.2 22.0 273 161-481 36-375 (408)
70 PRK11646 multidrug resistance 99.5 1.4E-12 3.1E-17 128.8 22.2 268 160-480 31-360 (400)
71 PRK10642 proline/glycine betai 99.5 8.9E-14 1.9E-18 141.2 13.4 157 2-210 142-315 (490)
72 TIGR00792 gph sugar (Glycoside 99.5 4.1E-13 8.9E-18 134.6 18.1 160 301-481 215-382 (437)
73 TIGR00886 2A0108 nitrite extru 99.5 5.4E-13 1.2E-17 130.3 17.6 147 301-465 218-365 (366)
74 KOG0254|consensus 99.5 6.8E-14 1.5E-18 142.7 11.2 182 1-231 165-379 (513)
75 KOG2532|consensus 99.5 6.5E-13 1.4E-17 131.5 17.7 263 184-477 76-417 (466)
76 TIGR00901 2A0125 AmpG-related 99.5 1.2E-12 2.6E-17 127.5 18.7 157 300-463 198-355 (356)
77 TIGR00885 fucP L-fucose:H+ sym 99.5 1.9E-12 4.1E-17 128.1 20.3 156 301-480 225-382 (410)
78 PRK11010 ampG muropeptide tran 99.5 4.8E-12 1E-16 128.2 22.6 235 211-481 142-380 (491)
79 PRK11652 emrD multidrug resist 99.5 3.7E-12 8.1E-17 125.8 21.2 263 164-478 32-359 (394)
80 TIGR02718 sider_RhtX_FptX side 99.5 1.1E-11 2.4E-16 122.2 22.6 167 300-481 200-368 (390)
81 COG2223 NarK Nitrate/nitrite t 99.5 2.8E-12 6E-17 120.7 16.9 167 300-481 210-377 (417)
82 PRK08633 2-acyl-glycerophospho 99.4 3.4E-12 7.4E-17 143.4 18.4 156 301-476 225-381 (1146)
83 KOG1330|consensus 99.4 6.3E-13 1.4E-17 126.0 9.0 285 163-479 56-412 (493)
84 PRK11902 ampG muropeptide tran 99.4 8E-11 1.7E-15 116.6 23.7 163 300-481 201-367 (402)
85 KOG2533|consensus 99.4 1E-11 2.2E-16 123.4 15.2 193 183-385 83-350 (495)
86 PRK11195 lysophospholipid tran 99.4 1.2E-10 2.5E-15 114.9 22.4 251 184-476 41-353 (393)
87 PF13347 MFS_2: MFS/sugar tran 99.4 4.9E-11 1.1E-15 119.1 19.8 164 298-481 215-386 (428)
88 KOG2532|consensus 99.4 8.7E-12 1.9E-16 123.5 13.6 206 2-256 152-438 (466)
89 PRK15403 multidrug efflux syst 99.4 8.5E-11 1.8E-15 116.7 20.5 269 166-478 42-372 (413)
90 COG2807 CynX Cyanate permease 99.3 9.3E-11 2E-15 108.2 18.4 264 164-482 36-362 (395)
91 PRK06814 acylglycerophosphoeth 99.3 4.3E-11 9.4E-16 134.2 18.4 270 183-479 54-396 (1140)
92 COG2814 AraJ Arabinose efflux 99.3 9.8E-12 2.1E-16 118.3 10.8 193 2-255 125-376 (394)
93 PF00083 Sugar_tr: Sugar (and 99.3 4.1E-14 8.8E-19 142.4 -5.8 74 1-84 125-217 (451)
94 PRK09669 putative symporter Ya 99.3 1.6E-10 3.5E-15 116.0 16.6 163 300-481 221-390 (444)
95 TIGR00887 2A0109 phosphate:H+ 99.3 1.2E-11 2.7E-16 126.0 8.6 62 1-62 138-238 (502)
96 PRK10077 xylE D-xylose transpo 99.3 1E-10 2.3E-15 118.7 15.3 48 2-49 144-197 (479)
97 PF11700 ATG22: Vacuole efflux 99.3 2E-09 4.4E-14 107.5 23.9 160 314-482 283-445 (477)
98 PF03825 Nuc_H_symport: Nucleo 99.2 8.4E-10 1.8E-14 108.0 20.8 166 300-482 199-367 (400)
99 PRK09848 glucuronide transport 99.2 1.3E-10 2.9E-15 116.7 15.6 163 300-481 220-390 (448)
100 PRK09952 shikimate transporter 99.2 1.6E-10 3.4E-15 115.7 14.3 156 2-212 149-317 (438)
101 PRK10406 alpha-ketoglutarate t 99.2 4.7E-11 1E-15 119.4 10.5 160 2-217 148-315 (432)
102 PRK10429 melibiose:sodium symp 99.2 7E-10 1.5E-14 112.2 18.6 140 331-481 249-395 (473)
103 PF05977 MFS_3: Transmembrane 99.2 4.1E-10 8.8E-15 113.7 16.6 132 334-481 239-371 (524)
104 PRK15075 citrate-proton sympor 99.2 1.9E-09 4.1E-14 107.9 20.1 163 2-216 141-309 (434)
105 TIGR01301 GPH_sucrose GPH fami 99.2 3E-09 6.4E-14 105.7 20.2 179 301-481 246-446 (477)
106 PF06609 TRI12: Fungal trichot 99.2 2E-08 4.4E-13 101.4 26.2 132 333-478 331-466 (599)
107 TIGR00894 2A0114euk Na(+)-depe 99.1 3.3E-10 7.2E-15 114.5 12.1 159 2-210 155-326 (465)
108 COG2211 MelB Na+/melibiose sym 99.1 4.1E-09 8.9E-14 102.6 18.8 162 301-481 229-398 (467)
109 COG2270 Permeases of the major 99.1 7.6E-09 1.7E-13 97.8 19.6 139 328-482 267-406 (438)
110 COG2271 UhpC Sugar phosphate p 99.1 3.4E-10 7.4E-15 106.7 10.5 160 3-210 142-319 (448)
111 COG0738 FucP Fucose permease [ 99.1 8.4E-10 1.8E-14 103.5 12.9 159 300-482 228-387 (422)
112 PF01306 LacY_symp: LacY proto 99.1 9.8E-11 2.1E-15 112.7 6.8 160 301-481 213-377 (412)
113 PRK15462 dipeptide/tripeptide 99.1 1.4E-09 3E-14 108.5 14.8 157 309-481 6-166 (493)
114 PRK03545 putative arabinose tr 99.1 7.5E-10 1.6E-14 109.2 12.6 150 2-210 121-270 (390)
115 TIGR00924 yjdL_sub1_fam amino 99.1 1.7E-08 3.7E-13 101.9 22.1 123 350-479 314-443 (475)
116 KOG2504|consensus 99.1 6.1E-10 1.3E-14 111.9 11.1 160 302-482 292-453 (509)
117 PRK11462 putative transporter; 99.1 1.2E-08 2.6E-13 102.6 19.9 117 351-481 266-389 (460)
118 TIGR01299 synapt_SV2 synaptic 99.1 1.3E-09 2.8E-14 113.9 13.0 132 331-478 185-316 (742)
119 PRK10207 dipeptide/tripeptide 99.1 2.5E-08 5.4E-13 100.8 21.6 115 353-473 314-435 (489)
120 TIGR00805 oat sodium-independe 99.0 9.4E-09 2E-13 107.0 18.5 90 300-394 322-415 (633)
121 PRK11010 ampG muropeptide tran 99.0 1.5E-08 3.3E-13 102.8 19.1 47 2-50 131-178 (491)
122 PRK09556 uhpT sugar phosphate 99.0 1.2E-09 2.6E-14 110.4 9.6 161 2-210 146-323 (467)
123 TIGR00883 2A0106 metabolite-pr 99.0 3E-08 6.4E-13 97.6 18.9 159 2-215 120-289 (394)
124 KOG2615|consensus 99.0 4.5E-09 9.8E-14 97.5 11.5 122 341-478 290-413 (451)
125 TIGR00895 2A0115 benzoate tran 99.0 4.9E-09 1.1E-13 103.4 12.5 138 328-481 32-169 (398)
126 PRK11663 regulatory protein Uh 98.9 9.2E-09 2E-13 102.9 12.9 136 330-481 40-175 (434)
127 KOG2563|consensus 98.9 1.1E-07 2.4E-12 90.6 19.1 167 298-481 256-423 (480)
128 PRK10054 putative transporter; 98.9 1.8E-08 3.9E-13 99.5 14.3 135 328-478 22-157 (395)
129 TIGR02332 HpaX 4-hydroxyphenyl 98.9 1.1E-08 2.4E-13 101.6 12.6 148 314-478 10-157 (412)
130 PRK12307 putative sialic acid 98.9 1.5E-08 3.4E-13 101.1 13.7 137 328-480 33-169 (426)
131 TIGR00891 2A0112 putative sial 98.9 2.7E-08 5.9E-13 98.4 15.1 156 309-481 9-164 (405)
132 PLN00028 nitrate transmembrane 98.9 1.8E-08 4E-13 101.9 13.7 150 311-478 35-184 (476)
133 PRK11902 ampG muropeptide tran 98.9 1.1E-07 2.4E-12 94.2 19.1 47 2-50 118-165 (402)
134 TIGR00710 efflux_Bcr_CflA drug 98.9 1.7E-08 3.8E-13 99.2 13.2 138 328-481 20-157 (385)
135 TIGR01272 gluP glucose/galacto 98.9 6.6E-08 1.4E-12 91.9 16.5 134 329-481 156-292 (310)
136 TIGR00788 fbt folate/biopterin 98.9 3.8E-09 8.2E-14 106.3 8.5 135 341-481 281-415 (468)
137 PRK10207 dipeptide/tripeptide 98.9 3.1E-08 6.8E-13 100.1 14.9 157 310-481 12-171 (489)
138 KOG4686|consensus 98.9 7.1E-09 1.5E-13 92.2 8.4 135 329-481 280-416 (459)
139 PRK10473 multidrug efflux syst 98.9 2.1E-08 4.6E-13 98.9 12.7 151 314-480 4-154 (392)
140 PRK09584 tppB putative tripept 98.9 2.3E-07 4.9E-12 94.4 20.3 116 351-473 319-438 (500)
141 TIGR00711 efflux_EmrB drug res 98.9 1.3E-08 2.9E-13 103.4 11.4 138 328-481 17-154 (485)
142 PRK05122 major facilitator sup 98.9 3.2E-08 6.9E-13 98.0 13.7 144 330-481 32-176 (399)
143 PRK03893 putative sialic acid 98.9 2.4E-08 5.2E-13 101.9 13.1 137 328-480 35-171 (496)
144 PRK10213 nepI ribonucleoside t 98.9 3.3E-08 7.1E-13 97.6 13.6 131 335-481 42-172 (394)
145 PRK10504 putative transporter; 98.9 2.1E-08 4.6E-13 101.5 12.5 152 313-481 11-162 (471)
146 PRK03699 putative transporter; 98.8 5.3E-08 1.1E-12 96.2 14.6 154 308-478 3-156 (394)
147 PRK11551 putative 3-hydroxyphe 98.8 3.2E-08 6.8E-13 98.2 12.5 134 330-479 32-165 (406)
148 TIGR00924 yjdL_sub1_fam amino 98.8 6.9E-08 1.5E-12 97.5 14.3 148 316-481 14-169 (475)
149 PRK09874 drug efflux system pr 98.8 1.1E-07 2.4E-12 94.4 15.1 137 328-481 29-170 (408)
150 PRK12382 putative transporter; 98.8 6.2E-08 1.3E-12 95.6 13.0 144 330-481 32-176 (392)
151 cd06174 MFS The Major Facilita 98.8 6.8E-08 1.5E-12 93.3 12.8 137 328-480 14-150 (352)
152 PRK10489 enterobactin exporter 98.8 3.4E-08 7.4E-13 98.4 10.6 163 303-481 12-174 (417)
153 COG2223 NarK Nitrate/nitrite t 98.8 1.1E-07 2.3E-12 90.1 12.7 149 318-481 19-167 (417)
154 TIGR00897 2A0118 polyol permea 98.8 8E-08 1.7E-12 95.2 12.5 138 332-481 32-170 (402)
155 TIGR00893 2A0114 d-galactonate 98.8 3.9E-08 8.5E-13 96.7 10.3 136 330-481 11-146 (399)
156 TIGR00886 2A0108 nitrite extru 98.8 1.1E-07 2.3E-12 93.0 13.1 135 328-478 16-151 (366)
157 PRK15011 sugar efflux transpor 98.7 3.8E-08 8.3E-13 97.2 9.9 46 160-211 237-282 (393)
158 PF07690 MFS_1: Major Facilita 98.7 9.5E-08 2.1E-12 92.6 12.4 135 330-480 13-148 (352)
159 TIGR00900 2A0121 H+ Antiporter 98.7 9.1E-08 2E-12 93.1 11.9 141 330-481 16-156 (365)
160 PRK15034 nitrate/nitrite trans 98.7 4.5E-08 9.7E-13 96.7 9.7 152 314-477 35-187 (462)
161 KOG3764|consensus 98.7 3.2E-08 6.9E-13 92.6 8.0 260 183-481 108-431 (464)
162 PRK09584 tppB putative tripept 98.7 2.4E-07 5.2E-12 94.2 15.2 160 303-481 15-178 (500)
163 PRK11646 multidrug resistance 98.7 1.5E-07 3.3E-12 93.1 13.0 132 330-477 27-159 (400)
164 PRK11652 emrD multidrug resist 98.7 1.6E-07 3.5E-12 92.7 12.8 132 334-481 29-160 (394)
165 TIGR00901 2A0125 AmpG-related 98.7 6.1E-08 1.3E-12 94.3 9.7 49 2-50 107-161 (356)
166 PRK11102 bicyclomycin/multidru 98.7 1.1E-07 2.3E-12 93.3 10.7 136 330-481 8-143 (377)
167 PRK15402 multidrug efflux syst 98.7 2.1E-07 4.5E-12 92.4 12.6 133 333-481 33-165 (406)
168 PRK03633 putative MFS family t 98.7 1.8E-07 3.9E-12 92.0 11.8 136 328-479 21-156 (381)
169 TIGR01272 gluP glucose/galacto 98.7 9.1E-07 2E-11 84.1 16.1 165 2-219 34-216 (310)
170 PRK15462 dipeptide/tripeptide 98.7 2.9E-06 6.3E-11 84.9 20.3 117 350-473 310-434 (493)
171 TIGR00881 2A0104 phosphoglycer 98.7 7.1E-08 1.5E-12 94.4 8.6 133 329-477 11-144 (379)
172 PRK11273 glpT sn-glycerol-3-ph 98.7 1.8E-07 3.8E-12 94.2 11.6 124 332-468 48-171 (452)
173 PRK15403 multidrug efflux syst 98.6 2.4E-07 5.2E-12 92.0 12.2 128 337-480 40-167 (413)
174 TIGR00903 2A0129 major facilit 98.6 1.9E-07 4.1E-12 91.0 11.1 137 328-481 6-142 (368)
175 TIGR00892 2A0113 monocarboxyla 98.6 2.8E-07 6E-12 92.8 12.7 134 331-481 37-171 (455)
176 PRK11195 lysophospholipid tran 98.6 3.1E-07 6.7E-12 90.6 12.7 128 333-479 23-150 (393)
177 TIGR00712 glpT glycerol-3-phos 98.6 1.6E-07 3.5E-12 94.1 10.5 133 333-478 47-179 (438)
178 PRK14995 methyl viologen resis 98.6 3.6E-07 7.8E-12 93.1 13.0 138 328-481 21-159 (495)
179 TIGR00885 fucP L-fucose:H+ sym 98.6 6.5E-07 1.4E-11 88.7 14.0 134 331-477 21-154 (410)
180 PRK10091 MFS transport protein 98.6 4.2E-07 9.1E-12 89.4 12.3 135 330-480 20-154 (382)
181 PRK10133 L-fucose transporter; 98.6 7.1E-07 1.5E-11 89.3 14.1 135 330-477 43-177 (438)
182 PTZ00207 hypothetical protein; 98.6 2.6E-06 5.7E-11 86.8 18.0 134 330-480 370-515 (591)
183 PRK11043 putative transporter; 98.6 6.9E-07 1.5E-11 88.5 13.6 129 337-481 30-158 (401)
184 PRK09705 cynX putative cyanate 98.6 7E-07 1.5E-11 88.1 12.8 133 330-479 26-158 (393)
185 TIGR02718 sider_RhtX_FptX side 98.6 4.2E-06 9E-11 82.6 18.0 46 3-50 122-167 (390)
186 TIGR00879 SP MFS transporter, 98.5 2.1E-07 4.4E-12 94.2 8.8 114 347-473 70-183 (481)
187 TIGR00890 2A0111 Oxalate/Forma 98.5 4.8E-07 1E-11 88.4 9.9 132 330-478 20-151 (377)
188 TIGR00806 rfc RFC reduced fola 98.5 2.3E-06 5.1E-11 83.5 14.0 281 160-469 46-405 (511)
189 TIGR00806 rfc RFC reduced fola 98.5 2.1E-06 4.5E-11 83.9 13.6 146 312-476 27-173 (511)
190 KOG2615|consensus 98.5 4.6E-07 9.9E-12 84.5 7.4 116 346-478 66-181 (451)
191 PRK08633 2-acyl-glycerophospho 98.4 2.6E-06 5.6E-11 96.2 14.7 131 336-479 33-165 (1146)
192 TIGR00880 2_A_01_02 Multidrug 98.4 8.7E-07 1.9E-11 73.1 8.2 110 356-481 6-115 (141)
193 TIGR00896 CynX cyanate transpo 98.4 9.5E-07 2.1E-11 85.9 9.2 135 328-480 15-149 (355)
194 PF05977 MFS_3: Transmembrane 98.4 1.8E-06 3.8E-11 87.5 11.2 164 303-482 5-168 (524)
195 TIGR00899 2A0120 sugar efflux 98.4 3.5E-06 7.6E-11 82.5 12.3 133 333-481 17-153 (375)
196 TIGR00898 2A0119 cation transp 98.4 1E-06 2.2E-11 90.2 8.7 125 335-475 111-238 (505)
197 TIGR01301 GPH_sucrose GPH fami 98.4 5.7E-06 1.2E-10 82.5 13.6 161 313-475 5-174 (477)
198 KOG0253|consensus 98.3 1.3E-06 2.8E-11 81.1 7.3 65 4-81 191-273 (528)
199 PRK09528 lacY galactoside perm 98.3 1E-05 2.3E-10 80.6 14.7 136 330-478 27-166 (420)
200 PRK06814 acylglycerophosphoeth 98.3 6.4E-06 1.4E-10 92.9 14.6 119 350-481 54-172 (1140)
201 TIGR00805 oat sodium-independe 98.3 2.2E-06 4.7E-11 89.4 9.7 169 312-480 32-235 (633)
202 PTZ00207 hypothetical protein; 98.3 1.2E-05 2.5E-10 82.1 13.4 135 330-476 44-178 (591)
203 KOG0255|consensus 98.3 4E-06 8.8E-11 86.1 10.3 121 342-479 112-232 (521)
204 PF03137 OATP: Organic Anion T 98.2 2.9E-07 6.4E-12 93.4 0.0 174 300-479 297-514 (539)
205 PF06609 TRI12: Fungal trichot 98.2 1.5E-05 3.2E-10 81.0 11.4 119 336-472 67-185 (599)
206 COG3104 PTR2 Dipeptide/tripept 98.2 5.5E-06 1.2E-10 80.6 7.9 162 303-481 15-183 (498)
207 KOG2533|consensus 98.2 3.4E-06 7.4E-11 84.3 6.5 156 2-208 158-336 (495)
208 TIGR00882 2A0105 oligosacchari 98.1 5.6E-05 1.2E-09 74.7 13.1 140 328-478 17-158 (396)
209 PF06963 FPN1: Ferroportin1 (F 98.0 0.0015 3.3E-08 64.3 22.0 161 299-471 250-410 (432)
210 PF06813 Nodulin-like: Nodulin 98.0 3.6E-05 7.9E-10 69.6 9.5 138 328-477 17-155 (250)
211 KOG0252|consensus 98.0 1.2E-05 2.6E-10 77.1 6.5 110 345-466 81-193 (538)
212 COG0738 FucP Fucose permease [ 98.0 0.00018 3.8E-09 68.3 13.4 131 334-478 34-165 (422)
213 PF03209 PUCC: PUCC protein; 97.9 0.0025 5.4E-08 61.1 20.9 126 341-480 237-364 (403)
214 KOG1330|consensus 97.9 3.9E-05 8.5E-10 73.8 8.2 143 313-472 34-176 (493)
215 TIGR00792 gph sugar (Glycoside 97.9 7E-05 1.5E-09 75.0 10.4 136 334-479 21-162 (437)
216 KOG3626|consensus 97.9 0.00031 6.7E-09 72.3 14.3 88 300-392 384-475 (735)
217 TIGR00902 2A0127 phenyl propri 97.9 0.0002 4.3E-09 70.4 12.7 137 328-481 19-156 (382)
218 PF12832 MFS_1_like: MFS_1 lik 97.8 8.5E-05 1.8E-09 53.9 6.7 59 327-385 14-72 (77)
219 PF13347 MFS_2: MFS/sugar tran 97.7 0.0026 5.6E-08 63.6 18.9 49 184-232 263-311 (428)
220 KOG2504|consensus 97.7 0.00015 3.3E-09 73.2 9.8 134 332-481 65-198 (509)
221 KOG3764|consensus 97.7 5E-05 1.1E-09 71.6 5.5 123 344-482 102-225 (464)
222 PRK10429 melibiose:sodium symp 97.7 0.00021 4.5E-09 72.5 10.1 139 331-479 24-169 (473)
223 PRK11128 putative 3-phenylprop 97.7 0.00038 8.2E-09 68.5 11.4 136 329-481 20-156 (382)
224 KOG2816|consensus 97.6 0.00078 1.7E-08 67.1 12.9 119 343-478 272-391 (463)
225 PRK09669 putative symporter Ya 97.6 0.00024 5.3E-09 71.3 9.6 138 333-480 29-173 (444)
226 PRK11462 putative transporter; 97.4 0.0012 2.6E-08 66.6 11.3 139 333-481 29-174 (460)
227 PF01770 Folate_carrier: Reduc 97.4 0.0012 2.7E-08 63.8 10.5 140 316-471 250-394 (412)
228 KOG3762|consensus 97.4 0.0014 3.1E-08 64.5 10.4 133 333-481 391-524 (618)
229 TIGR00889 2A0110 nucleoside tr 97.3 0.0023 5E-08 63.7 11.8 62 333-394 23-85 (418)
230 PF11700 ATG22: Vacuole efflux 97.3 0.05 1.1E-06 54.8 20.8 45 161-211 303-347 (477)
231 COG3104 PTR2 Dipeptide/tripept 97.2 0.013 2.8E-07 57.7 15.3 119 350-474 326-451 (498)
232 COG2211 MelB Na+/melibiose sym 97.0 0.0071 1.5E-07 59.7 11.2 143 330-482 29-178 (467)
233 TIGR00788 fbt folate/biopterin 96.9 0.0046 1E-07 62.5 9.8 150 314-481 28-186 (468)
234 PF03825 Nuc_H_symport: Nucleo 96.9 0.0083 1.8E-07 59.1 10.9 65 328-392 17-82 (400)
235 KOG2325|consensus 96.9 0.0034 7.4E-08 62.1 7.8 120 343-474 66-186 (488)
236 PF01306 LacY_symp: LacY proto 96.9 0.0029 6.2E-08 61.6 7.1 56 329-384 23-79 (412)
237 KOG2563|consensus 96.8 0.0081 1.8E-07 58.1 9.8 123 346-478 77-201 (480)
238 PF05631 DUF791: Protein of un 96.8 0.053 1.2E-06 51.3 15.1 59 314-374 246-304 (354)
239 PF03092 BT1: BT1 family; Int 96.8 0.00047 1E-08 68.7 1.3 130 345-481 252-382 (433)
240 PRK09848 glucuronide transport 96.8 0.014 2.9E-07 58.8 11.7 59 334-392 30-93 (448)
241 KOG2325|consensus 96.8 0.0015 3.3E-08 64.5 4.4 43 439-481 410-452 (488)
242 PF05978 UNC-93: Ion channel r 96.6 0.053 1.1E-06 45.4 12.3 132 328-476 11-148 (156)
243 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.03 6.4E-07 58.6 12.7 137 335-479 10-150 (654)
244 PF06779 DUF1228: Protein of u 96.6 0.018 3.9E-07 42.3 7.8 69 330-398 9-77 (85)
245 PF05631 DUF791: Protein of un 96.2 0.086 1.9E-06 50.0 12.3 55 339-393 60-114 (354)
246 KOG3098|consensus 96.2 0.17 3.7E-06 50.2 14.9 125 351-476 282-411 (461)
247 PF03209 PUCC: PUCC protein; 96.1 0.05 1.1E-06 52.4 10.4 119 361-480 27-152 (403)
248 KOG2816|consensus 96.0 0.092 2E-06 52.5 12.0 106 357-481 71-176 (463)
249 KOG3574|consensus 95.9 0.31 6.7E-06 46.5 14.2 42 440-481 392-433 (510)
250 PF03137 OATP: Organic Anion T 95.7 0.0027 5.9E-08 64.9 0.0 36 1-36 164-199 (539)
251 KOG0637|consensus 95.5 0.018 3.9E-07 55.9 4.5 157 312-471 32-197 (498)
252 COG2807 CynX Cyanate permease 95.2 0.37 8.1E-06 45.7 12.2 132 330-480 29-161 (395)
253 PF12832 MFS_1_like: MFS_1 lik 94.9 0.057 1.2E-06 39.1 4.6 50 160-216 21-70 (77)
254 COG0477 ProP Permeases of the 94.8 0.27 5.8E-06 45.7 10.6 131 333-477 22-156 (338)
255 KOG3626|consensus 94.6 0.19 4.2E-06 52.4 9.4 46 159-209 412-457 (735)
256 PF07672 MFS_Mycoplasma: Mycop 94.6 0.58 1.3E-05 42.3 11.2 54 423-476 210-265 (267)
257 PF02487 CLN3: CLN3 protein; 94.3 0.21 4.5E-06 48.6 8.5 38 439-476 357-394 (402)
258 KOG0637|consensus 94.1 0.079 1.7E-06 51.6 5.0 32 353-384 337-368 (498)
259 KOG3762|consensus 94.0 0.054 1.2E-06 53.8 3.7 63 328-390 26-88 (618)
260 KOG4686|consensus 93.4 0.26 5.5E-06 45.1 6.6 43 162-210 287-329 (459)
261 PF03092 BT1: BT1 family; Int 93.0 0.48 1E-05 47.3 8.7 132 337-482 14-153 (433)
262 TIGR00880 2_A_01_02 Multidrug 92.9 0.065 1.4E-06 43.4 2.0 46 2-49 75-120 (141)
263 TIGR00769 AAA ADP/ATP carrier 92.4 2.7 5.9E-05 42.2 13.1 127 351-477 46-189 (472)
264 COG2270 Permeases of the major 90.3 0.95 2E-05 44.0 7.1 107 353-472 63-170 (438)
265 PF06779 DUF1228: Protein of u 89.6 2.1 4.6E-05 31.5 6.9 55 160-220 12-66 (85)
266 KOG4332|consensus 88.7 15 0.00032 33.7 12.7 98 351-457 285-384 (454)
267 KOG3810|consensus 87.7 3.3 7.3E-05 39.2 8.4 146 301-468 227-377 (433)
268 KOG3098|consensus 87.5 6.5 0.00014 39.2 10.9 111 346-473 48-158 (461)
269 TIGR00926 2A1704 Peptide:H+ sy 84.4 54 0.0012 34.8 16.5 13 241-253 158-170 (654)
270 PF13000 Acatn: Acetyl-coenzym 83.5 2.3 5.1E-05 42.3 5.6 42 439-480 427-468 (544)
271 KOG1237|consensus 81.9 45 0.00098 34.6 14.5 147 333-479 58-220 (571)
272 PF01770 Folate_carrier: Reduc 78.3 28 0.00061 34.3 11.0 146 312-476 5-152 (412)
273 TIGR00769 AAA ADP/ATP carrier 77.6 85 0.0018 31.8 21.1 38 353-390 308-345 (472)
274 TIGR00939 2a57 Equilibrative N 75.5 92 0.002 31.2 14.8 39 435-473 390-428 (437)
275 KOG2881|consensus 74.6 55 0.0012 29.6 10.6 34 358-391 250-283 (294)
276 PF02990 EMP70: Endomembrane p 73.6 58 0.0013 33.5 12.5 73 300-378 250-327 (521)
277 PF06963 FPN1: Ferroportin1 (F 72.5 1.1E+02 0.0023 30.6 16.4 150 331-481 20-177 (432)
278 KOG3574|consensus 72.0 14 0.00031 35.7 6.9 69 311-383 30-103 (510)
279 PF06813 Nodulin-like: Nodulin 71.8 12 0.00027 34.1 6.4 63 161-230 23-85 (250)
280 KOG1277|consensus 68.1 33 0.00073 33.6 8.5 23 302-326 283-305 (593)
281 PF03219 TLC: TLC ATP/ADP tran 66.7 1.4E+02 0.003 30.4 13.2 117 360-478 71-205 (491)
282 PF07672 MFS_Mycoplasma: Mycop 66.2 34 0.00074 31.2 7.8 42 9-50 1-45 (267)
283 PRK03612 spermidine synthase; 65.6 1.5E+02 0.0034 30.4 13.5 27 452-478 144-170 (521)
284 PF11947 DUF3464: Protein of u 61.7 18 0.00038 30.0 4.7 89 371-468 57-145 (153)
285 PF00854 PTR2: POT family; In 55.4 19 0.00042 35.0 4.9 96 379-481 2-100 (372)
286 PF03219 TLC: TLC ATP/ADP tran 54.6 2.5E+02 0.0055 28.6 22.7 39 353-391 324-362 (491)
287 KOG4830|consensus 50.4 31 0.00067 31.5 4.7 48 334-381 38-94 (412)
288 KOG1278|consensus 47.6 1.1E+02 0.0025 31.1 8.4 71 298-374 314-385 (628)
289 KOG1479|consensus 47.2 1.1E+02 0.0024 30.1 8.3 272 180-472 84-398 (406)
290 PF13000 Acatn: Acetyl-coenzym 47.1 89 0.0019 31.7 7.7 15 370-384 62-76 (544)
291 COG5336 Uncharacterized protei 46.5 54 0.0012 25.2 4.7 29 361-389 55-84 (116)
292 cd02434 Nodulin-21_like_3 Nodu 41.0 2.7E+02 0.0058 25.0 11.4 22 361-382 180-201 (225)
293 PF02694 UPF0060: Uncharacteri 39.4 87 0.0019 24.1 5.0 47 348-394 54-100 (107)
294 KOG4332|consensus 37.6 9.9 0.00021 34.8 -0.3 43 339-381 63-105 (454)
295 COG0477 ProP Permeases of the 35.6 94 0.002 28.1 6.1 34 184-217 42-75 (338)
296 PRK02237 hypothetical protein; 34.5 1.4E+02 0.003 23.1 5.4 45 349-393 57-101 (109)
297 PF01733 Nucleoside_tran: Nucl 33.1 12 0.00025 35.5 -0.6 38 435-472 266-303 (309)
298 PF07857 DUF1632: CEO family ( 30.4 2.5E+02 0.0055 25.7 7.5 38 196-233 67-104 (254)
299 COG3202 ATP/ADP translocase [E 30.1 6.1E+02 0.013 25.9 12.3 162 311-478 26-209 (509)
300 PF04120 Iron_permease: Low af 27.3 3.4E+02 0.0073 22.0 7.0 11 240-250 38-48 (132)
301 PF00854 PTR2: POT family; In 24.6 6.4E+02 0.014 24.3 10.8 42 184-225 75-116 (372)
302 TIGR00267 conserved hypothetic 22.9 4.7E+02 0.01 22.1 11.0 24 359-382 124-147 (169)
303 TIGR03732 lanti_perm_MutE lant 22.0 5.9E+02 0.013 22.9 8.7 31 356-386 131-161 (241)
304 COG3086 RseC Positive regulato 21.5 4.4E+02 0.0095 21.7 6.4 38 344-381 68-105 (150)
305 TIGR03733 lanti_perm_MutG lant 20.7 6.3E+02 0.014 22.8 9.9 40 353-392 134-173 (248)
306 cd02432 Nodulin-21_like_1 Nodu 20.5 6.1E+02 0.013 22.6 11.3 24 359-382 172-195 (218)
307 PF03616 Glt_symporter: Sodium 20.4 4E+02 0.0087 26.0 7.3 110 15-210 160-269 (368)
No 1
>KOG0569|consensus
Probab=100.00 E-value=2.8e-39 Score=313.63 Aligned_cols=350 Identities=43% Similarity=0.769 Sum_probs=311.9
Q ss_pred chhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHH
Q psy3807 105 LTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYS 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (483)
.+++.........++.+++|| +.+++|+....+.+|.++.+.+.+|.+.++.....+++
T Consensus 5 ~t~~L~~~~~~~~~gsf~~Gy---------------------~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS 63 (485)
T KOG0569|consen 5 LTRRLLLAVIVATLGSFQFGY---------------------NIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWS 63 (485)
T ss_pred ccHHHHHHHHHHHHhchhhhh---------------------hheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHH
Confidence 344555555666666666777 77788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccCC------------------------------------------------------
Q psy3807 185 VAVSIFAIGGMLGGFSGGSIADKFGR------------------------------------------------------ 210 (483)
Q Consensus 185 ~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------------------------------ 210 (483)
.+++++.+|.++|++..++++||+||
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E 143 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTE 143 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 99999999999999999999999999
Q ss_pred -------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---------------cCCChHHHHH
Q psy3807 211 -------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---------------TGVINAPEKV 268 (483)
Q Consensus 211 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---------------~~~~~~~~~~ 268 (483)
|.+....+++..+|.+++..++...+.++...|++.+.+..+++++.+ .+++.+||++
T Consensus 144 ~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~ 223 (485)
T KOG0569|consen 144 ISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARK 223 (485)
T ss_pred cChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHH
Confidence 888889999999999999988887778888899999999877766522 4889999999
Q ss_pred HHHHHhCCcchHHHHHHHHHHHHHhhcc--cccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCC
Q psy3807 269 TLRKLRASTQIEVDIEEMRVEQIAQQSE--SKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLS 346 (483)
Q Consensus 269 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 346 (483)
.+++++++++.+++.++..++.++++.. ++.+++|+++++++|+.+.+.+.+.+.+|++|.+.+.+|...++++.|++
T Consensus 224 sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~ 303 (485)
T KOG0569|consen 224 ALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFT 303 (485)
T ss_pred HHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCC
Confidence 9999999988777777666655444433 67789999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh-hhHHHHHHHHHHH
Q psy3807 347 EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI-DWMSYLSVISILG 425 (483)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 425 (483)
..++.+.+...+++.++.++++.+++||+|||++++.+..++.++.+++.......+ .. +|..+..+..++.
T Consensus 304 ~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 304 PEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSN-------SFGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887766552 22 5677788999999
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
+...+++|++|++|.+.+|++|++.|+.+.++..++.|+.+++..+.||++.+.+|+
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~ 433 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP 433 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999986
No 2
>KOG0254|consensus
Probab=99.95 E-value=2.3e-25 Score=226.74 Aligned_cols=292 Identities=32% Similarity=0.568 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
++++++..++..+|++++|+++|++||
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC
Confidence 799999999999999999999999999
Q ss_pred -----chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh--------------ccCCChHHHHHHHH
Q psy3807 211 -----GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY--------------NTGVINAPEKVTLR 271 (483)
Q Consensus 211 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~--------------~~~~~~~~~~~~l~ 271 (483)
|.+.+..+....+|..++..++...... ..+||..+.+..+++++. +++++.+++++.++
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~ 250 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLK 250 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHH
Confidence 7777888888999999998777543211 158999998886666542 26788999999999
Q ss_pred HHhC--CcchHHHHHHHHHHHHHhh--cccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCC
Q psy3807 272 KLRA--STQIEVDIEEMRVEQIAQQ--SESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSE 347 (483)
Q Consensus 272 ~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 347 (483)
++++ +++.+.+.++++.+...+. ...+..+.++++ |..++++.+++.++.+||++|++...+|.+.+++..|.+.
T Consensus 251 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~ 329 (513)
T KOG0254|consen 251 RLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS 329 (513)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC
Confidence 9998 5566666666652221111 122224667775 7788999999999999999999999999999999999876
Q ss_pred cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHH
Q psy3807 348 KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFV 427 (483)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
.. .....+.++..+++++++.+++||+|||++++.|...+.+++++++.......... .......+..+...+++.
T Consensus 330 ~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v 405 (513)
T KOG0254|consen 330 DT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYP---NSSKGAGWLAIVFLCLFI 405 (513)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCC---CcccchhHHHHHHHHHHH
Confidence 55 77788889999999999999999999999999999999999999988765542110 023345677888889999
Q ss_pred HHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 428 VFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 428 ~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..++.++++++|.+.+|++|.+.|+++.+++..++++.+++....++.+.+..+
T Consensus 406 ~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~ 459 (513)
T KOG0254|consen 406 FSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG 459 (513)
T ss_pred HHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999887643
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=3.6e-23 Score=214.26 Aligned_cols=295 Identities=16% Similarity=0.125 Sum_probs=196.4
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
...+.+.+++|++..+. +++.++..++.++|++++|+++||+||
T Consensus 188 ~ilp~i~~~~gls~~~~------g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~ 261 (742)
T TIGR01299 188 FVLPSAEKDLCIPDSGK------GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFC 261 (742)
T ss_pred HHHHHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34456666777765443 789999999999999999999999999
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccc-----------cCCCCchhHHHHHHH
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPI-----------LGTDEGWPVLLAMLG 251 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~w~~~~~~~~ 251 (483)
+...+..+....+|.++++.++.... .....+||+.+++.+
T Consensus 262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence 45555666666777777665432111 012357999988876
Q ss_pred HHHHHhc--------------cCCChHHHHHHHHHHhCCcch-----HHH--HHHHHHHHHHh-----hcccc-------
Q psy3807 252 MFQFGYN--------------TGVINAPEKVTLRKLRASTQI-----EVD--IEEMRVEQIAQ-----QSESK------- 298 (483)
Q Consensus 252 i~~~~~~--------------~~~~~~~~~~~l~~~~~~~~~-----~~~--~~~~~~~~~~~-----~~~~~------- 298 (483)
++.++.+ .+++.+|+.+.++++++.+.. .+. .++++...+++ ++...
T Consensus 342 lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (742)
T TIGR01299 342 FPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCF 421 (742)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcch
Confidence 6554421 567888999999988764321 111 11111111000 00000
Q ss_pred -----------cchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhc------------------------
Q psy3807 299 -----------ISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESS------------------------ 343 (483)
Q Consensus 299 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 343 (483)
.+++++| ++++++++++.++++++..+ +++.+..|.|.++++.
T Consensus 422 ~~~~~~~~~~~~~~~~lf-~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (742)
T TIGR01299 422 VRALSEGGGIWGNFLRCF-NPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNF 499 (742)
T ss_pred hhhhhhhhhHHHHHHHHc-CccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccccccchhcccccc
Confidence 1345566 56788888888888888776 5577778888775431
Q ss_pred ------------------CC-----C----------------C-------------------------------------
Q psy3807 344 ------------------GL-----S----------------E------------------------------------- 347 (483)
Q Consensus 344 ------------------g~-----s----------------~------------------------------------- 347 (483)
|+ + .
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (742)
T TIGR01299 500 TLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHN 579 (742)
T ss_pred chhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhcccccc
Confidence 00 0 0
Q ss_pred ---------------cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 348 ---------------KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 348 ---------------~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
...+....+.+++.+++.+++++++||+|||++++++.++.+++++++++...
T Consensus 580 ~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s------------ 647 (742)
T TIGR01299 580 KEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS------------ 647 (742)
T ss_pred CCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc------------
Confidence 01234466677899999999999999999999999888888887766654211
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
....++..+++.++.+ +..+..+++++|++|++.|++++|+.++.++++++++|.+.+.+.+.
T Consensus 648 ---~~~ll~~~~l~g~~~~-~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 648 ---ESAMIALLCLFGGLSI-AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred ---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1112222222222222 34455778899999999999999999999999999999999887654
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.91 E-value=5.5e-22 Score=201.19 Aligned_cols=326 Identities=27% Similarity=0.436 Sum_probs=200.7
Q ss_pred HHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHH
Q psy3807 108 HLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAV 187 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (483)
.+...+....++.+..||| .+.++...+.+...+.+....+++.+..+. +++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 61 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYD---------------------TAVISGTVESLNTVFVAPQNLSESAANSLL------GFCV 61 (479)
T ss_pred HHHHHHHHHHHHHHhcCcc---------------------cceehHhHHHHHHHhcccccccccCChhHH------HHHH
Confidence 3444555556667777884 444554444444444333333334443333 7999
Q ss_pred HHHHHHHHHHHHhhhhhccccCCch-------------------------------------------------------
Q psy3807 188 SIFAIGGMLGGFSGGSIADKFGRGG------------------------------------------------------- 212 (483)
Q Consensus 188 ~~~~~~~~ig~~~~g~l~dr~GR~~------------------------------------------------------- 212 (483)
+++.++.+++++++|+++||+||++
T Consensus 62 s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 141 (479)
T PRK10077 62 ASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLS 141 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHH
Confidence 9999999999999999999999933
Q ss_pred ---------------HhhHHHHHHHHHHHHHHHHccccc------cCCCCchhHHHHHHHHHHHHhc------cC-----
Q psy3807 213 ---------------LGTVNQLAVTLGLLISQILGIEPI------LGTDEGWPVLLAMLGMFQFGYN------TG----- 260 (483)
Q Consensus 213 ---------------~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~w~~~~~~~~i~~~~~~------~~----- 260 (483)
.++..+.+..+|..+++.++.... .....+||++|++.+++.++.. ++
T Consensus 142 ~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l 221 (479)
T PRK10077 142 PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYL 221 (479)
T ss_pred HHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 222333333334333333221110 0124689999987754433311 11
Q ss_pred ---CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH
Q psy3807 261 ---VINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST 337 (483)
Q Consensus 261 ---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
++.+++++..++.++.++.+++.++.++..++++.. .+..+. .........+....+++..+++...+|.|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 295 (479)
T PRK10077 222 MSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKT----GGKLLM--FGVGVIVIGVMLSVFQQFVGINVVLYYAP 295 (479)
T ss_pred HHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhh----hhhhcc--hhHHHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 223333333344333322222222222111111100 011111 11122333334445566667777888999
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 338 ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 338 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
.+.++.|.+...........++..+++.+++++++||+|||++++.+..+++++.+.+....... ....
T Consensus 296 ~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~-----------~~~~ 364 (479)
T PRK10077 296 EIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-----------APGI 364 (479)
T ss_pred HHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC-----------cccH
Confidence 99999999887777788888999999999999999999999999999988888877665432111 0112
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
.....++++..++..++.+..+.+++|.+|++.|+++.|+.+..+++++++++.++|.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 365 VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 233344445555555666778899999999999999999999999999999999998765
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.91 E-value=9.9e-23 Score=207.30 Aligned_cols=281 Identities=16% Similarity=0.172 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
+++.+...++.+++++++|+++||+||
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 138 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI 138 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 789999999999999999999999999
Q ss_pred -----------chHhhHHHHHHHHHHHHHHHHccccc--c-------------------CCCCchhHHHHHHHHHHHHhc
Q psy3807 211 -----------GGLGTVNQLAVTLGLLISQILGIEPI--L-------------------GTDEGWPVLLAMLGMFQFGYN 258 (483)
Q Consensus 211 -----------~~~~~~~~~~~~~g~~~~~~~~~~~~--~-------------------~~~~~w~~~~~~~~i~~~~~~ 258 (483)
+...+..+....+|..+++.++.... . ...++||+++.+.+++.++..
T Consensus 139 ~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~ 218 (502)
T TIGR00887 139 ITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL 218 (502)
T ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH
Confidence 45555666666666666665432110 0 113479999988876655422
Q ss_pred --------------cCCChH-HHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccC---CCchHHHHHHHH
Q psy3807 259 --------------TGVINA-PEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSS---TLRKPLIIGIVM 320 (483)
Q Consensus 259 --------------~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 320 (483)
.++|.+ ++.+.+.+.+..+..+ +.++.++.++ +++..+.+++++++++ +.++.++.....
T Consensus 219 ~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (502)
T TIGR00887 219 YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEA-EPDEVEKAST-AVEVPKASWSDFFTHFFKWRHGKHLLGTAGS 296 (502)
T ss_pred HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccccc-Ccccccchhc-cccchhhhHHHHHHHHhhhHHHHHHHHHHHH
Confidence 233432 3444455544321111 1111111110 1111223577888643 222333333333
Q ss_pred HHhhhcchHHHHHHhHHHHHhhcCCCCcchhH------------HHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHH
Q psy3807 321 QLSQQFSGINAVFYYSTALFESSGLSEKTAKF------------TTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGM 388 (483)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~ 388 (483)
++.+++ .++....+.|.++++.|++..+... ......++.+++.+++++++||+|||++++.+..++
T Consensus 297 ~~~~~~-~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~ 375 (502)
T TIGR00887 297 WFLLDI-AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFIL 375 (502)
T ss_pred HHHHHH-HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHH
Confidence 443332 2344556688888888887543211 233345567788999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHH
Q psy3807 389 FIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFV 468 (483)
Q Consensus 389 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~ 468 (483)
+++++++....... .... .......+..+++.+..++.+.+++|++|++.|+++.|+.+.++++++++
T Consensus 376 ~~~~~~l~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~ 443 (502)
T TIGR00887 376 TVLFFVLGFAYNHL----------STHG--FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAII 443 (502)
T ss_pred HHHHHHHHHHHHhc----------chhH--HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHH
Confidence 77776665432110 0011 11222223334566677888899999999999999999999999999999
Q ss_pred HHHHhHHhhhh
Q psy3807 469 VGLGFPTLNLP 479 (483)
Q Consensus 469 ~~~~~~~l~~~ 479 (483)
++.++|++.+.
T Consensus 444 ~~~~~~~l~~~ 454 (502)
T TIGR00887 444 GQFGFLYLAQH 454 (502)
T ss_pred HHHHhhhhhcc
Confidence 99999999884
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=9.9e-28 Score=241.30 Aligned_cols=291 Identities=34% Similarity=0.545 Sum_probs=222.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------------------------
Q psy3807 181 IFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------------------------- 210 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------------------------- 210 (483)
...++..+...+|.++|++++|+++||+||
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 445789999999999999999999999999
Q ss_pred -----------chHhhHHHHHHHHHHHHHHHHcccccc-CCCCchhHHHHHHHHHHHH--------------hccCCChH
Q psy3807 211 -----------GGLGTVNQLAVTLGLLISQILGIEPIL-GTDEGWPVLLAMLGMFQFG--------------YNTGVINA 264 (483)
Q Consensus 211 -----------~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~w~~~~~~~~i~~~~--------------~~~~~~~~ 264 (483)
+...+..+....+|..++..++..... ..+.+||..+.+..++.+. +..++|.+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~ 205 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDE 205 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccccc
Confidence 556667777777777777766543211 1235699999888766543 22677888
Q ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcC
Q psy3807 265 PEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSG 344 (483)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (483)
|+++.++++++++..+++.++..++.++.++. +.++++++++++++++++..+.+..++++++++...+|.|.++++.|
T Consensus 206 ~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~ 284 (451)
T PF00083_consen 206 EAEKVLRKLRGKEIEDEEIEEIKAEKKESQES-KASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG 284 (451)
T ss_pred cccccccccccccccccccccccccccccccc-ceeeeeccccccccccccccccccccccccccccccccccccccccc
Confidence 99998888776655444444443333222222 25788999888888888898999999999998899999999999888
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHH-HHHHHhhhccchhhhhhHHHHHHHHH
Q psy3807 345 LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITI-SLLIKEFFGFVQEMIDWMSYLSVISI 423 (483)
Q Consensus 345 ~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (483)
.+.. ...+.+.++..+++.+++.+++||+|||++++.+..+++++.+.++. ..... ++.++.....++..
T Consensus 285 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~ 355 (451)
T PF00083_consen 285 ISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGV-------SSSSWWSILSIVFL 355 (451)
T ss_pred cccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccceee
Confidence 7765 45566777888999999999999999999999999888888777751 11111 11112244455556
Q ss_pred HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.++...++.+++++.+.+++|++|++.|+++.+++..++++++++.+.++|++.+..+
T Consensus 356 ~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 356 ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6666778888999999999999999999999999999999999999999999988765
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=1.5e-20 Score=190.37 Aligned_cols=294 Identities=34% Similarity=0.582 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------------------------------
Q psy3807 183 YSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------------------------------- 210 (483)
Q Consensus 183 ~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------------------------------- 210 (483)
.+++.+++.++..++.++.|+++||+||
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 152 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYL 152 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHH
Confidence 3899999999999999999999999999
Q ss_pred ---------chHhhHHHHHHHHHHHHHHHHc-cccccCCCCchhHHHHHHHHHHHHh------ccC--------CChHHH
Q psy3807 211 ---------GGLGTVNQLAVTLGLLISQILG-IEPILGTDEGWPVLLAMLGMFQFGY------NTG--------VINAPE 266 (483)
Q Consensus 211 ---------~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~w~~~~~~~~i~~~~~------~~~--------~~~~~~ 266 (483)
+...++.+.+..+|..+++.++ .........+||+.|.+.++..++. +.+ ++.+++
T Consensus 153 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (481)
T TIGR00879 153 SEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEA 232 (481)
T ss_pred HccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHH
Confidence 5566777777888888888776 1112224578999988764333221 111 122222
Q ss_pred HHHHHHHhCCcchHHHH-H---HHHHHHHHhhcccccchhhhhccCC-CchHHHHHHHHHHhhhcchHHHHHHhHHHHHh
Q psy3807 267 KVTLRKLRASTQIEVDI-E---EMRVEQIAQQSESKISMSELLCSST-LRKPLIIGIVMQLSQQFSGINAVFYYSTALFE 341 (483)
Q Consensus 267 ~~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
++..++.++.++.+.+. + ..+...+.+.+..+..+.+.++..+ ..++.+....+..+.+..+.+...++.|.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (481)
T TIGR00879 233 RKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE 312 (481)
T ss_pred HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH
Confidence 23333332222111111 1 1111111111111222444443221 23444444555555555555667788999999
Q ss_pred hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 342 SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 342 ~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
+.|++..+......+..++.+++.++.+++.||+|||+.+..+..+++++.+.+........ ++.........+.
T Consensus 313 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 387 (481)
T TIGR00879 313 NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFV-----TGSSKSSGNVAIV 387 (481)
T ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhccc-----CCcccchhHHHHH
Confidence 99999888888888889999999999999999999999998887777777666653222110 0000001233344
Q ss_pred HHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 422 SILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...++..+++.+..++.+.+++|.+|++.|+++.++.+...++++++++.+.+.+.+..|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~ 447 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG 447 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445556666777778888888999999999999999999999999999999999887643
No 8
>KOG0253|consensus
Probab=99.89 E-value=1.3e-21 Score=177.78 Aligned_cols=289 Identities=18% Similarity=0.161 Sum_probs=195.3
Q ss_pred HHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------
Q psy3807 159 EKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------- 210 (483)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------- 210 (483)
...+.+......|.+..+. ++++.....|..+++..+|.++|++||
T Consensus 97 ~s~i~~~l~~~w~~s~~q~------~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~ 170 (528)
T KOG0253|consen 97 LSLILPALDEVWGPSEGQA------PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLC 170 (528)
T ss_pred HHHHHHHHHhhhchhhhhh------hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhh
Confidence 3455566666666443333 688899999999999999999999999
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh-----
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY----- 257 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~----- 257 (483)
+.........+.+|.++...+.+... .+.|||+.......|..++
T Consensus 171 ~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm--~~~gwr~~l~~~~~pl~~~a~f~~ 248 (528)
T KOG0253|consen 171 VFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVM--SNFGWRYLLFTSSTPLMFAARFLV 248 (528)
T ss_pred HHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHhHHHHHHHHHh
Confidence 11222222566677777666654433 4568999888776654442
Q ss_pred ---------ccCCChHHHHHHHHHHhCCcch-------------HHHHHH--HHHHHHHhhcccccchhhhhccCCCchH
Q psy3807 258 ---------NTGVINAPEKVTLRKLRASTQI-------------EVDIEE--MRVEQIAQQSESKISMSELLCSSTLRKP 313 (483)
Q Consensus 258 ---------~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (483)
+.+++++|+.+.++|+...+.. ++|.++ ..+.+.+..++...+..+++ .|++||+
T Consensus 249 w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLl-sp~lrkt 327 (528)
T KOG0253|consen 249 WVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLL-SPKLRKT 327 (528)
T ss_pred hcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhc-ChHHHHH
Confidence 2678889999888887654321 111111 11111122233344566777 6889999
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHhhc--------------------CCCCcchhHHHHHHHHHHHHHHHhHHHHhh
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFESS--------------------GLSEKTAKFTTIGIGAVMVTMTIISIPLMD 373 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------g~s~~~~~~~~~~~~~~~~~g~~~~~~l~d 373 (483)
++....+++.+.++.+..+. ....+++.. ..+....+...++..+..++|.++.++++|
T Consensus 328 tlllw~iwfgnafsyyg~VL-lttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVL-LTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHH-HHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 99988888876554433332 222233221 123345566778889999999999999999
Q ss_pred ccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhH
Q psy3807 374 RMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPA 453 (483)
Q Consensus 374 r~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~ 453 (483)
|+|||+.+..++++++++.+.+.... .+....+.++..-++.+.+. .+.|+|+.|++|+..|++
T Consensus 407 rlGRKkTMal~l~~f~iflfll~~c~---------------~rn~~tvllf~arafisg~f-qvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 407 RLGRKKTMALSLILFGIFLFLLTTCK---------------TRNAYTVLLFTARAFISGAF-QVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHhc---------------CcchhHHHHHHHHHHHhchh-eEEEEecCcccchhhhhc
Confidence 99999999988888888777665432 12233444455555555444 347899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy3807 454 AMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 454 ~~g~~~~~~~~~~~~~~~~~ 473 (483)
+.|.++.++++++++.|++.
T Consensus 471 gvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH
Confidence 99999999999999999775
No 9
>KOG0252|consensus
Probab=99.86 E-value=9.6e-22 Score=184.17 Aligned_cols=165 Identities=18% Similarity=0.194 Sum_probs=127.1
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhH---------HHHHHHHHHHHHHHhHHHH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKF---------TTIGIGAVMVTMTIISIPL 371 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~---------~~~~~~~~~~~g~~~~~~l 371 (483)
+...|..+ +-+.++..+..|+..... ++....+...+++..|..+.+... ..++..+..++|..+...+
T Consensus 294 F~~~f~~~-hg~~Llgt~~~WFllDia-fy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 294 FSRLFLRW-HGKHLLGTAGTWFLLDIA-FYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhhhhh-hhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 33444444 667888888888887764 466677788888887776544332 3334445566688888889
Q ss_pred hhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCch
Q psy3807 372 MDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPR 451 (483)
Q Consensus 372 ~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R 451 (483)
+|++|||+..+.|++++++.+++++..+... . .....+++..+..++.++|++....++.+|.||++.|
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~----------~-~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR 440 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQL----------E-NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVR 440 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCcccc----------c-ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHh
Confidence 9999999999999999999888877643211 1 2233455566677788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 452 PAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 452 ~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+++.|++.+.+..+++++.+.|.++.+
T Consensus 441 ~t~hGIsAA~GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 441 STCHGISAASGKAGAIVGAFGFLYLTD 467 (538)
T ss_pred hhhhhHHHHhccchHHHHHHHhhHhhh
Confidence 999999999999999999999999877
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.84 E-value=4.9e-19 Score=176.82 Aligned_cols=288 Identities=16% Similarity=0.102 Sum_probs=177.6
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
.+..+.+.+++|.+..+. +++.++..++..+++++.|+++||+||
T Consensus 38 ~~~~~~i~~~~~~s~~~~------~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEG------AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTL 111 (426)
T ss_pred HHHHHHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 345566777788776554 788999999999999999999999999
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc--c
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN--T 259 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~--~ 259 (483)
++..+....+..+|..+++.+.... ....+||+.+++..++.++.+ .
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l--~~~~~w~~~f~i~~~~~~~~~~~~ 189 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF--AEAYGWRAAFFVGLLPVLLVIYIR 189 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHH--cccCCHHHHHHHHHHHHHHHHHHH
Confidence 4555666666777777776554222 245689999987654433322 1
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
...+++.+...++.++++ ++.+...+..+.++++++|++.++..... ....+. .+.....+..+.|.+
T Consensus 190 ~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 257 (426)
T PRK12307 190 ARAPESKEWEEAKLSGKG----------KHSQSAWSVFSLSMKGLFNRAQFPLTLCV-FIVLFS-IFGANWPIFGLLPTY 257 (426)
T ss_pred HHCCCChHHHHhhhhccc----------cccccchhhhhHHHHHHHhhchHHHHHHH-HHHHHH-HHHHHHHHHHHHHHH
Confidence 111111000000000000 00000000011245677876665433322 222221 122223345567777
Q ss_pred HhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH
Q psy3807 340 FESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS 419 (483)
Q Consensus 340 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
+++.|.+..+.........++.+++.++.+++.||+|||+.+..+..+..+..+.+... . . .....
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~---------~--~~~~~ 323 (426)
T PRK12307 258 LAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI---P---------Q--DNYLL 323 (426)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---c---------c--ccHHH
Confidence 88888888788888888889999999999999999999998887766655443332211 1 0 01111
Q ss_pred HHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 420 VISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+............+..+....++.|.+|++.|++++|+...++++++.++|.+.+.+.+.+|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 11111111222233344445677899999999999999999999999999999999988765
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=6.7e-20 Score=171.12 Aligned_cols=288 Identities=13% Similarity=0.115 Sum_probs=186.9
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
+...|.+.++.+++.++- |.+.+.+.+.+.++-++.|.++||.+.
T Consensus 49 ~~a~p~l~e~~~lsk~~l------G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~ 122 (448)
T COG2271 49 NLAMPALIEDGGLSKTQL------GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAV 122 (448)
T ss_pred hhccHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 344567777777766555 899999999999999999999999997
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh----
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---- 257 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---- 257 (483)
|+..++.+.+.++|+.+.+.+..........+||..|++.++.+++.
T Consensus 123 l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 123 LWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Confidence 77778888889999888887652111224558999999987665542
Q ss_pred --ccCCChHHH-HHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhh-----hccCCCchHHHHHHHHHHhhhcchH
Q psy3807 258 --NTGVINAPE-KVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSEL-----LCSSTLRKPLIIGIVMQLSQQFSGI 329 (483)
Q Consensus 258 --~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (483)
..++++++. .....+.++++ .+..+++++.+..+.+++ ++||..|. .++..++.. ..=
T Consensus 203 ~~~~rd~Pqs~GLP~ie~~~~d~---------~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~----la~a~vfvY-ivR 268 (448)
T COG2271 203 LFLLRDRPQSEGLPPIEEYRGDP---------LEIYEEEKENEGLTAWQIFVKYVLKNKLIWL----LALANVFVY-VVR 268 (448)
T ss_pred HHHhCCCccccCCCCHHHhhcCc---------hhhhhhhccCCCccHHHHHHHHHHcChHHHH----HHHHHHHHH-HHH
Confidence 133333321 11111111111 111011112221344444 45554332 222222221 223
Q ss_pred HHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc--CChHHHHhh-hHHHHHHHHHHHHHHHHHhhh
Q psy3807 330 NAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM--GRRTLHLYG-LGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 330 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grr~~l~~~-~~~~~i~~~~~~~~~~~~~~~ 405 (483)
+.+..+.|.++.+ .|++..++.......-+++++|++++|+++||+ |||....+. .+...++.+....
T Consensus 269 ~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~-------- 340 (448)
T COG2271 269 YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWL-------- 340 (448)
T ss_pred HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHc--------
Confidence 6677888877754 799999999999999999999999999999996 777665432 2222222222211
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHH-HHHHHHHHhHHhhhhcC
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWI-ANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~g 481 (483)
.+..++.....++....++-.|+.-+.-..+.|..|.+.-|++.|+...++++ |+..+....+.+.|.+|
T Consensus 341 ------~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 341 ------APNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred ------CCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC
Confidence 11112334444444455555666666677788999999999999999999999 88888888888877643
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.83 E-value=3.4e-18 Score=173.46 Aligned_cols=313 Identities=18% Similarity=0.201 Sum_probs=176.5
Q ss_pred HHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHH-HHHHH
Q psy3807 112 TILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSV-AVSIF 190 (483)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 190 (483)
......++.+..+||...+ .+..+.+.++++.+.++.. +..... +.++.
T Consensus 17 ~~~~~~~g~~~~~~d~~~~-----------------------------~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~ 66 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVY-----------------------------GFVAYALGKVFFPGADPSV-QMIAALATFSVP 66 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHH
Confidence 3444556777788866554 3445566666654443321 111122 24778
Q ss_pred HHHHHHHHHhhhhhccccCC------------------------------------------------------------
Q psy3807 191 AIGGMLGGFSGGSIADKFGR------------------------------------------------------------ 210 (483)
Q Consensus 191 ~~~~~ig~~~~g~l~dr~GR------------------------------------------------------------ 210 (483)
.++..+|+++.|+++||+||
T Consensus 67 ~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~ 146 (490)
T PRK10642 67 FLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEY 146 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHh
Confidence 89999999999999999999
Q ss_pred ------chHhhHHHHHHHHHHHHHHHHcccc--cc----CCCCchhHHHHHHHHHHHH--hccCCChHHHHHHHHHHhCC
Q psy3807 211 ------GGLGTVNQLAVTLGLLISQILGIEP--IL----GTDEGWPVLLAMLGMFQFG--YNTGVINAPEKVTLRKLRAS 276 (483)
Q Consensus 211 ------~~~~~~~~~~~~~g~~~~~~~~~~~--~~----~~~~~w~~~~~~~~i~~~~--~~~~~~~~~~~~~l~~~~~~ 276 (483)
+...+..+.+..+|..+++.+.... .. ...++||++|++.+++.++ +++..-+|. .+..++.
T Consensus 147 ~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~es-p~~~~~~--- 222 (490)
T PRK10642 147 SPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEET-PAFQQHV--- 222 (490)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCC-hhHHHHH---
Confidence 3344444444445555544332110 00 1257999999987654432 111111111 1100000
Q ss_pred cchHHHHHHHHHH-HHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHH
Q psy3807 277 TQIEVDIEEMRVE-QIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTT 354 (483)
Q Consensus 277 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~ 354 (483)
++.+++ .+..++.++.++++++++ .++.+.......++.+. .++.+..|.|.+++ ..|++..+.....
T Consensus 223 -------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 292 (490)
T PRK10642 223 -------DKLEQGDREGLQDGPKVSFKEIATK--HWRSLLTCIGLVIATNV-TYYMLLTYMPSYLSHNLHYSEDHGVLII 292 (490)
T ss_pred -------HhhhhhccccccccccCCHHHHHHH--hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 000000 000011123356777753 33444444433333332 44555667787775 4688877777777
Q ss_pred HHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhcccc
Q psy3807 355 IGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGP 434 (483)
Q Consensus 355 ~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (483)
....++.+++.++.++++||+|||+.+..+..+..++...+.... . .. .........++...+.+.+.
T Consensus 293 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 293 IAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--N---------SN-VIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--h---------CC-CHHHHHHHHHHHHHHHHHHH
Confidence 777888899999999999999999988777654443332221111 0 00 01111122222222222222
Q ss_pred ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 435 GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 435 ~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+ ....+.+|.+|++.|+++.|+...++++++.++|.+.+++.+..+
T Consensus 361 g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~ 406 (490)
T PRK10642 361 G-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ 406 (490)
T ss_pred H-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 234566799999999999999888899999999999998877543
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.83 E-value=1.3e-18 Score=172.34 Aligned_cols=299 Identities=12% Similarity=0.041 Sum_probs=169.0
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
....+.+.+++|.+..+. +++.++..++..++.++.|+++||+||
T Consensus 32 ~~~~~~l~~~~~~s~~~~------g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 105 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDA------ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFI 105 (405)
T ss_pred HHHHHHHHHHhCCChhhH------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344456777888876665 789999999999999999999999999
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc--c
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN--T 259 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~--~ 259 (483)
+...++.+.+..+|..+++.++.........+||..+.+.+++.++.+ .
T Consensus 106 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~ 185 (405)
T TIGR00891 106 ARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLR 185 (405)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 455666667777777777765433221122359999887755443321 1
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhc-cCCCchHHHHHHHHHHhhhcchHHHHHHhHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLC-SSTLRKPLIIGIVMQLSQQFSGINAVFYYSTA 338 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
...+++.+.. ++.+++++.+++.++..+.....+...+.......+ .++.+...........+.++.. .....+.|.
T Consensus 186 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 263 (405)
T TIGR00891 186 KNIPEAEDWK-EKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYS-HPIQDLLPT 263 (405)
T ss_pred HhCCCChhHH-HHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHH-hhhhhhhHH
Confidence 1111110000 000000000000000000000000000000000111 1111221222222222222222 222333444
Q ss_pred HH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 339 LF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 339 ~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
++ ++.|.+..+.+.......++.+++.++.+++.||+|||+.+..+.....+..+..... . + ..+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~----------~-~~~ 329 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI---G----------A-NVA 329 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh---C----------C-chH
Confidence 44 5678888888888888999999999999999999999998877665443222211110 0 0 111
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...+..++ ......+..++...+.+|.+|++.|+++.|+.+.+++++..++|.+.+.+.|..|
T Consensus 330 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 330 VLGLGLFF-QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHH-HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11121122 2222233344455778899999999999999999999999999999999999877
No 14
>TIGR00898 2A0119 cation transport protein.
Probab=99.82 E-value=6e-19 Score=180.15 Aligned_cols=280 Identities=18% Similarity=0.210 Sum_probs=177.5
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.++++++-++. ...++..+++.++.+++.++.|+++||+||
T Consensus 113 ~~i~~e~~l~c~~~---~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 113 STIVTEWDLVCEDA---WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred ccEEEEecceechH---HHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 45566777652211 122799999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc-------
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN------- 258 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~------- 258 (483)
+...+..+.+..+|.++++.++... .+||+.+++.+++.++..
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~~wr~~~~~~~i~~~~~~~~~~~~~ 264 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI-----PDWRWLQLAVSLPTFLFFLLSWFVP 264 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4555566677777777777765422 239999888765543321
Q ss_pred -------cCCChHHHHHHHHHHhCCcch--HHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchH
Q psy3807 259 -------TGVINAPEKVTLRKLRASTQI--EVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGI 329 (483)
Q Consensus 259 -------~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (483)
.+++.+++.+.+++..+.+.. ..+..+.+.+++++++.++.++++++++|++++.++...+.++..
T Consensus 265 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----- 339 (505)
T TIGR00898 265 ESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT----- 339 (505)
T ss_pred CChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHH-----
Confidence 245566666666665432211 111111111111111222357889999888877766655554432
Q ss_pred HHHHHh-HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYY-STALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
...+| .+...+..+.+ ........++..+++.++.+++.||+|||+.+.++.++.+++.+.+.....
T Consensus 340 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-------- 407 (505)
T TIGR00898 340 -AFSYYGLVLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-------- 407 (505)
T ss_pred -HHHHHHHhccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC--------
Confidence 22222 22333334433 345566778889999999999999999999999888777777665543210
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhH
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFP 474 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 474 (483)
. ..+......++...+.. +..+..+++++|++|++.|+++.|+.+..++++++++|.+.+
T Consensus 408 ---~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 408 ---D--LYFLRTALAVLGKFGIT-SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred ---C--chHHHHHHHHHHHHHHH-HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 0 01111222222222222 223456688899999999999999999999999999999887
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.81 E-value=2.9e-18 Score=170.13 Aligned_cols=272 Identities=16% Similarity=0.161 Sum_probs=170.0
Q ss_pred HHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-------------------------------
Q psy3807 162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------- 210 (483)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------- 210 (483)
..+.+.+++|.+.++. +++.+...++..+++++.|+++||+||
T Consensus 37 ~~~~~~~~~~~s~~~~------g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (406)
T PRK11551 37 AAPRMAQEFGLDVAQM------GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3455666777665444 799999999999999999999999999
Q ss_pred ---------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---c--
Q psy3807 211 ---------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---N-- 258 (483)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---~-- 258 (483)
+...++.+.+..+|..+++.++... ....+||..+++.++..+.. .
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA--AGDAAWRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666666777777777665322 24568999888764332211 1
Q ss_pred -cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH
Q psy3807 259 -TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST 337 (483)
Q Consensus 259 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
.++++++..+ +++++ + ++...++++++++.++ ....... .+......+....+.|
T Consensus 189 ~l~~~~~~~~~-----~~~~~---~--------------~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~p 244 (406)
T PRK11551 189 WLPESRAFAQA-----AGAGK---Q--------------RAPVLRALFGEGRATA-TLLLWIS-YFFTLIVLYFLLNWLP 244 (406)
T ss_pred hCCCChhHHhc-----cCcch---h--------------hhhhHHHHhhhhhhhH-HHHHHHH-HHHHHHHHHHHHHHHH
Confidence 1111111000 00000 0 0001112222222111 1111111 1112223345566778
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 338 ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 338 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
.++++.|.+..+.+......+++.+++.++.+++.||+|||+.+..+.....++.+.+... . ..+
T Consensus 245 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~------------~~~ 309 (406)
T PRK11551 245 SLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA---P------------SFA 309 (406)
T ss_pred HHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc---C------------cHH
Confidence 8888889998888999999999999999999999999999998877655555444333221 0 111
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..... .+.......+..+....+..|.+|++.|+++.|+.+...+++..++|.+.+.+.+..+
T Consensus 310 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 372 (406)
T PRK11551 310 GMLLA-GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR 372 (406)
T ss_pred HHHHH-HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC
Confidence 11122 2222222223445566788999999999999999999999999999999999987644
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.80 E-value=1.4e-17 Score=166.45 Aligned_cols=165 Identities=15% Similarity=0.116 Sum_probs=93.6
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
++++++|+++. ........+..+. .++.+..|.|.+++ +.|++..+.........++..++..+.++++||+|||
T Consensus 234 ~~~~l~~~~~~---~~~~~~~~~~~~~-~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr 309 (432)
T PRK10406 234 SLKGLWRNRRA---FIMVLGFTAAGSL-CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309 (432)
T ss_pred cHHHHHhhHHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 46777765432 2222222222222 33445566676664 5788877777777777777788888999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
+.+.++..+.++....+..... . .+ .....+....+.....+. ..+..+.+.+|.+|++.|+++.|++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~---------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~ 377 (432)
T PRK10406 310 TSMLCFGSLAALFTVPILSALQ-N---------VS-SPYAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVRALGVGLS 377 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-c---------CC-cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCccchhhhHH
Confidence 9877665543333222211110 0 00 111111111111111111 1233557789999999999999999
Q ss_pred HHHHHHH-HHHHHHHhHHhhhhcC
Q psy3807 459 VLVNWIA-NFVVGLGFPTLNLPYR 481 (483)
Q Consensus 459 ~~~~~~~-~~~~~~~~~~l~~~~g 481 (483)
+.++++. +...|.+.+ +++..|
T Consensus 378 ~~~g~~~~g~~~p~~~~-~l~~~g 400 (432)
T PRK10406 378 YAVANALFGGSAEYVAL-SLKSIG 400 (432)
T ss_pred HHHHHHHHHhHHHHHHH-HHHHhC
Confidence 9988863 444666655 444433
No 17
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.80 E-value=6.9e-18 Score=167.32 Aligned_cols=291 Identities=12% Similarity=0.075 Sum_probs=171.5
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
....+.+++++|.+.++. +++.+++.++..+++++.|+++||+||
T Consensus 28 ~~~~~~l~~~~~~s~~~~------g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMF------GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYL 101 (412)
T ss_pred HHHHHhhHhhcCCCHHHH------HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 344567788888776655 899999999999999999999999998
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHcccccc----CCCCchhHHHHHHHHHHHHh
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPIL----GTDEGWPVLLAMLGMFQFGY 257 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~w~~~~~~~~i~~~~~ 257 (483)
+...++.+....+|..+++.++..... .+..+||+.|.+.+++.++.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHH
Confidence 566777777888888888776543221 13468999999875554321
Q ss_pred ------ccCCChHH-------HHHHHH-HHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHh
Q psy3807 258 ------NTGVINAP-------EKVTLR-KLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLS 323 (483)
Q Consensus 258 ------~~~~~~~~-------~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (483)
..++.+++ +++... +.+.++. +.++.++..+++....+..+++++ ++ .+.......+
T Consensus 182 ~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~- 252 (412)
T TIGR02332 182 GVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQL---TLEQPEGAFAHAAMPQRSMLREIF-TP----AIMLYTLAYF- 252 (412)
T ss_pred HHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccc---cccccccccccccccHHHHHHHhc-Ch----HHHHHHHHHH-
Confidence 12222211 111000 0000000 000000000000000001122332 22 2222223222
Q ss_pred hhcchHHHHHHhHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHH-HhhhHHHHHHHHHHHHHHH
Q psy3807 324 QQFSGINAVFYYSTALFESS--GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLH-LYGLGGMFIFSIFITISLL 400 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l-~~~~~~~~i~~~~~~~~~~ 400 (483)
.+..+...+..|.|.++++. |++..++........++.+++.++.++++||++||+.. ........++. .+...
T Consensus 253 ~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~-- 329 (412)
T TIGR02332 253 CLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASA-- 329 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHh--
Confidence 23334566778888888874 56767778888888999999999999999999977753 33333332222 11110
Q ss_pred HHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 401 IKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
. +. .......+.....+.. ...+..++...|.+|++.|+++.|+.+..++++++++|.+.+.+.|..
T Consensus 330 ~-----------~~-~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~ 396 (412)
T TIGR02332 330 T-----------DH-NLIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT 396 (412)
T ss_pred c-----------CC-HHHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence 0 00 1111111111111111 122334566678999999999999999999999999999999999877
Q ss_pred C
Q psy3807 481 R 481 (483)
Q Consensus 481 g 481 (483)
|
T Consensus 397 g 397 (412)
T TIGR02332 397 G 397 (412)
T ss_pred C
Confidence 6
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.79 E-value=1.3e-17 Score=166.67 Aligned_cols=283 Identities=15% Similarity=0.103 Sum_probs=161.0
Q ss_pred HHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------
Q psy3807 163 KDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------- 210 (483)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------- 210 (483)
.+.+.+++|.+.++. +++.+...++..++.++.|+++||+||
T Consensus 46 ~~~~~~~~g~s~~~~------g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 119 (434)
T PRK11663 46 MPEMLADLGLSRSDI------GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWV 119 (434)
T ss_pred hHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345556677765544 789999999999999999999999999
Q ss_pred --------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH---h---c
Q psy3807 211 --------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG---Y---N 258 (483)
Q Consensus 211 --------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~---~---~ 258 (483)
+...++.+....+|..+++.+..... ...+||+.|.+.+++.+. . .
T Consensus 120 l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~--~~~gw~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 120 LNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA--LHYGWRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred HHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777777777777776543322 356899999877543321 1 1
Q ss_pred cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhh-----hccCCCchHHHHHHHHHHhhhcchHHHHH
Q psy3807 259 TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSEL-----LCSSTLRKPLIIGIVMQLSQQFSGINAVF 333 (483)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (483)
.++++++. +....++.+++.++ .+++++.++.+.++. ++++..+ ...+..+... .....+.
T Consensus 198 ~~~~p~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~ 263 (434)
T PRK11663 198 LRDKPQAM-----GLPSVGEWRHDALE----LAQQQEGAGLSRKEILTKYVLLNPYIW----LLSFSYVLVY-VVRAAIN 263 (434)
T ss_pred cCCCHhhc-----CCCCcccccccccc----cchhccccCCChhhhHHHHHhcChHHH----HHHHHHHHHH-HHHHHHH
Confidence 22221110 00000000000000 000011111223333 3333222 2222222222 2234455
Q ss_pred HhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc--CChHHH-HhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 334 YYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM--GRRTLH-LYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 334 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.+.|.++ ++.|++..++........++..++.++.+++.||+ ++|+.. ......+.+....+... .
T Consensus 264 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~------- 333 (434)
T PRK11663 264 DWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM---P------- 333 (434)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc---c-------
Confidence 6667777 55799988888888889999999999999999998 333332 22212222111111111 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.. .... .....+...++..+.........+|.+|++.|++++|+.++.++++.+++|.+++.+.|..|
T Consensus 334 --~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 334 --FA-SYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred --cc-cHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc
Confidence 00 0111 11111111122222222334566899999999999999999999999999999999998765
No 19
>PRK09952 shikimate transporter; Provisional
Probab=99.78 E-value=3.2e-17 Score=163.87 Aligned_cols=139 Identities=14% Similarity=0.071 Sum_probs=89.4
Q ss_pred HHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
+....+.|.++ +..|++...........++..+++.++.++++||+|||+.+..+.++.+++.+.+..... .
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~------ 339 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE-A------ 339 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-c------
Confidence 44445556555 456777655445555667788889999999999999999988776655444332222110 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHH-HHHHHHHHHhHHhhhhc
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNW-IANFVVGLGFPTLNLPY 480 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~-~~~~~~~~~~~~l~~~~ 480 (483)
....+..+...++...+.+. ..+..+++.+|.+|++.|+++.++.+.++. +++.++|.+.+.++|..
T Consensus 340 ----~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~ 407 (438)
T PRK09952 340 ----QSIFWIVFFSIMLANIAHDM-VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF 407 (438)
T ss_pred ----CChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00111112222222222222 234456788999999999999999887766 78999999999998754
No 20
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=4.5e-18 Score=167.64 Aligned_cols=294 Identities=17% Similarity=0.178 Sum_probs=174.0
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
....+.+.+++|.+..+. +++.++..++..++.++.|+++||+||
T Consensus 14 ~~~~~~~~~~~g~s~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQY------GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYI 87 (399)
T ss_pred hHhHHHHHHhhCCChhhH------HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 344566777888776555 899999999999999999999999999
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh----
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---- 257 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---- 257 (483)
+...+..+....+|..+++.++.... ...+||+.+.+.++..++.
T Consensus 88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~ 165 (399)
T TIGR00893 88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWIL--IHFSWQWAFIIEGVLGIIWGVLW 165 (399)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHH--HhCCchHHHHHHHHHHHHHHHHh
Confidence 44556666666777777776543222 3467999888764443221
Q ss_pred --ccCCChHHHHHHHHHHhCCcchHHHHHHHHH--HHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHH
Q psy3807 258 --NTGVINAPEKVTLRKLRASTQIEVDIEEMRV--EQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVF 333 (483)
Q Consensus 258 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (483)
..++++++.+...++ +.+.+.++.++ +.+++++.++.+.++.+|+|+.+. .++..+.... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~ 235 (399)
T TIGR00893 166 LKFIPDPPQKAKWLTEE-----EKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWG----LALGQFLVNI-GLGFFL 235 (399)
T ss_pred hheecCCCCccccCCHH-----HHhhcchhhccccccccccCCCccchHHHhcCHHHHH----HHHHHHHHHh-HHHHHH
Confidence 122211110000000 00000000000 001111222334566676654332 2232333332 334555
Q ss_pred HhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHH-hhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 334 YYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHL-YGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 334 ~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
.+.|.+++ ..|.+..+.+.......++.+++.++.+++.||++||+... .......++.+......... +
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 307 (399)
T TIGR00893 236 TWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT--------N 307 (399)
T ss_pred HHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh--------c
Confidence 56666654 56888888888888889999999999999999999986221 11111122211111111111 0
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.....+. .. ......+...+..+..+.+.+|.+|++.|+++.|+.+....+++.+++.+.+.+.|..|
T Consensus 308 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 308 YVNIPYA-AL-ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred cchhHHH-HH-HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 0001111 11 12222233333567778899999999999999999999999999999999999998766
No 21
>PRK15075 citrate-proton symporter; Provisional
Probab=99.77 E-value=2.1e-17 Score=165.18 Aligned_cols=143 Identities=14% Similarity=0.041 Sum_probs=94.5
Q ss_pred chHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhh
Q psy3807 327 SGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 405 (483)
.+++.+..|.|.++++ .|++..+......+..++.+++.++.++++||+|||+.+..+..+..+..... .. ...
T Consensus 252 ~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~-~~-~~~--- 326 (434)
T PRK15075 252 VSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA-LS-WLV--- 326 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HH-HHH---
Confidence 3456677888888876 69988888888888889999999999999999999998876644433221111 10 111
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHH-HHHHHHHHhHHhhhhcC
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWI-ANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~g 481 (483)
. .+.... ......+...+++ ...+..+.+.+|.+|++.|+++.++...++.. ++.++|.+.+.+.|..|
T Consensus 327 ----~-~~~~~~-~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 327 ----A-APSFAR-MLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred ----c-CCchHH-HHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 0 000111 1111111112222 22233446778999999999999998777776 48889999999988776
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.77 E-value=1.6e-17 Score=164.10 Aligned_cols=285 Identities=16% Similarity=0.079 Sum_probs=165.6
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
...+.+.+++|.+..+. +++.++..++..++.++.|+++||+||
T Consensus 38 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (398)
T TIGR00895 38 FAAPAISAEWGLDPVQL------GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLIL 111 (398)
T ss_pred hhHHHHhhccCCCHHHH------HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 34556667777665443 788889999999999999999999999
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH------
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG------ 256 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~------ 256 (483)
+...+..+....+|..+++.++.... ...+|+..+.+.++...+
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI--PVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh--hcccceeehhhhhhHHHHHHHHHH
Confidence 55566667777777777776643222 346788777765322111
Q ss_pred hccCCChHHHHHHHHHHhCCcchHHHHHHHHHHH--------HH--hhcccccc-hhhhhccCCCchHHHHHHHHHHhhh
Q psy3807 257 YNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQ--------IA--QQSESKIS-MSELLCSSTLRKPLIIGIVMQLSQQ 325 (483)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (483)
...++.++... ++ ++++.+++.++...+. ++ ++++.... .+.+++ ++..+......+...+..
T Consensus 190 ~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (398)
T TIGR00895 190 RFLPESIDFLV---SK--RPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQ-GKTARITVLLWLLYFMLL 263 (398)
T ss_pred HhCCCCChHHH---hc--CHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhc-chhHHHHHHHHHHHHHHH
Confidence 11111111000 00 0000000000000000 00 00001111 222332 333333333333333222
Q ss_pred cchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhh
Q psy3807 326 FSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 405 (483)
........+.|++.++.|.+..+.+.......++.+++.++.+++.||+|||+... +..+..+....+... ..
T Consensus 264 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~--- 336 (398)
T TIGR00895 264 -VGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGST--LF--- 336 (398)
T ss_pred -HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHH--hh---
Confidence 34455667778888888999888888888999999999999999999999995443 333333332222221 11
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
..+......++...+.+. ..+....+.+|.+|++.|+++.|+.+.+.+++..++|.+.+.+
T Consensus 337 ---------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 ---------SPTLLLLLGAIAGFFVNG-GQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred ---------CHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 111222222333333332 3345668889999999999999999999999999999998765
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.77 E-value=3.1e-17 Score=159.47 Aligned_cols=265 Identities=10% Similarity=-0.015 Sum_probs=157.9
Q ss_pred HHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------
Q psy3807 158 IEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------- 210 (483)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------- 210 (483)
......+.+++++|.+.++. +++.+.+.+++.+++++.|+++||+||
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~------g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEEL------GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 33455667788888876554 799999999999999999999999999
Q ss_pred ------------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---
Q psy3807 211 ------------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY--- 257 (483)
Q Consensus 211 ------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~--- 257 (483)
++..++.+.+..+|..+++.++.... ...+||..|.+.+++.++.
T Consensus 83 ~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~--~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY--TAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccchHHHHHHHHHHHHHHHHH
Confidence 55566666777777777776654332 4579999998864443221
Q ss_pred c---cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHH
Q psy3807 258 N---TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFY 334 (483)
Q Consensus 258 ~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (483)
. .++++++. ++ ..+ .+ + . ..++++++|+|..+... ...++ ....++.+..
T Consensus 161 ~~~~lp~~p~~~--------~~-~~~--~~---~----~----~~~~~~ll~~~~~~~~~----~~~~~-~~~~~~~~~~ 213 (368)
T TIGR00903 161 VLAALPALPFQA--------AE-GFG--FK---D----A----VKEFGALAGRKDLWIIG----AILGF-GVALFDNLAI 213 (368)
T ss_pred HHHHcCCCCCCC--------CC-Ccc--hH---H----H----HHHHHHHHcChhHHHHH----HHHHH-HHHHHHHHHH
Confidence 1 11111110 00 000 00 0 0 01356788776554322 22222 2234566678
Q ss_pred hHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh---HHHHh-hhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 335 YSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR---TLHLY-GLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 335 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr---~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
|.|.++++.|++.. ......+..+ .+.+..+++.||..|| +.... .....++....+.. ..
T Consensus 214 wlp~~L~~~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~---~~-------- 278 (368)
T TIGR00903 214 WLEAALRPAGLEDI-AGDAVALAIL---AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF---EL-------- 278 (368)
T ss_pred HHHHHHHHCCCChH-HHHHHHHHHH---HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH---cc--------
Confidence 88999988887753 3333333333 4444457888887653 33222 22222222211111 00
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
.....+...++.. ++..+..+..+.+.+|.+|++.|+++.|+.+..++++++.+|...+.++
T Consensus 279 ----~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 279 ----NRLALFAFIGIAG-LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred ----ccHHHHHHHHHHH-HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 0111222222222 2222233446688999999999999999999999999999999988776
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.76 E-value=3.4e-17 Score=165.24 Aligned_cols=136 Identities=12% Similarity=0.065 Sum_probs=90.7
Q ss_pred HHHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 329 INAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 329 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
......+.|.++ ++.|++..++........++.+++.++.++++||+|||+.+.....+..++...+... ..
T Consensus 274 ~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~--~~----- 346 (467)
T PRK09556 274 RIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ--HA----- 346 (467)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH--hc-----
Confidence 345667778766 4579998888888888899999999999999999999987765443333222111110 00
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHH-HHHHHHHHhHHhhh
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWI-ANFVVGLGFPTLNL 478 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~ 478 (483)
+ ..+...+..+.... ...+........+.|.+|++.|+++.|+.+..+++ +.+++|.+.+.+.|
T Consensus 347 -----~-~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 347 -----T-SEYMYLASLFALGF-LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred -----C-cHHHHHHHHHHHHH-HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 0 11111122222221 12222222234566999999999999999999997 77999999999998
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.76 E-value=3.8e-17 Score=160.10 Aligned_cols=273 Identities=15% Similarity=0.073 Sum_probs=164.8
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
.+.+.+.+++|.+.++. +++.++..++..+++++.|+++||+||
T Consensus 24 ~~~~~~~~~~~~s~~~~------g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 24 LLAPPLGRYFGVGVTAV------AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred hHHHHHHHHhCCCHHHH------HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777765544 899999999999999999999999999
Q ss_pred ---------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh------
Q psy3807 211 ---------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY------ 257 (483)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~------ 257 (483)
+...+....+..+|..+++.+.... .+..+||+.|.+.++..++.
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSV--INLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333344443322221111 13457999888775443321
Q ss_pred ccCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH
Q psy3807 258 NTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST 337 (483)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
..+.++++.. ++++ +.++++.+.++.+|++..+.... .. +...+.. .....+.+
T Consensus 176 ~~~~~~~~~~------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~-~~~~~~~~ 229 (377)
T TIGR00890 176 LIGYPPGQLI------KTNI---------------EVSVKDYTVWEMLRTPQFWVLYL-SF---FLNAVSG-LLLIGLYK 229 (377)
T ss_pred heecCchhcc------ccCc---------------ccchhhhhHHHHHcCccHHHHHH-HH---HHHhHHH-HHHHHHHH
Confidence 1111111100 0000 00001113455666655433221 11 1111212 22233344
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 338 ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 338 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
.+.++.|.+..+.........+..+++.++.+++.||+|||+.+.++..+..++.+.+..... ....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 296 (377)
T TIGR00890 230 PYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM-------------LNDV 296 (377)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc-------------chhH
Confidence 456777888777778888889999999999999999999999988877777766654433210 0111
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.......+.....+. ..+....+.+|.+|++.|+++.|+.+....++..+++.+.+.+.+..|
T Consensus 297 ~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 359 (377)
T TIGR00890 297 LFLATVALVFFTWGG-TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG 359 (377)
T ss_pred HHHHHHHHHHHHhcc-chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 111112222222222 223345678899999999999999999999999999999999988765
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.74 E-value=1.3e-16 Score=162.54 Aligned_cols=136 Identities=12% Similarity=0.017 Sum_probs=97.5
Q ss_pred HHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 332 VFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 332 ~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
...+.|.+++ +.|.+..+.+.......++.+++.++.++++||+|||+.+..+..+..+..+.+... .
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~-------- 362 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI---G-------- 362 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc---c--------
Confidence 4456677774 789999899999999999999999999999999999998877665544443322211 0
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
. ..............+.+.+..+....+++|.+|++.|++++|+.+....+++.++|.+.+.+.|.+|
T Consensus 363 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 363 --G-ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred --c-cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 0 1111111122222223333444455678899999999999999999999999999999999988765
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.73 E-value=7.5e-16 Score=154.80 Aligned_cols=138 Identities=10% Similarity=0.044 Sum_probs=85.3
Q ss_pred HHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc--CChHHHHh-hhHHHHHHHHHHHHHHHHHhhh
Q psy3807 330 NAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM--GRRTLHLY-GLGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 330 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grr~~l~~-~~~~~~i~~~~~~~~~~~~~~~ 405 (483)
+....|.|.++++ .|++..+++....+..++.+++.++.++++||+ +||....+ ...+..++.+.+.. ..
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~---~~--- 343 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL---NP--- 343 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH---hc---
Confidence 4455677777765 688888888888888899999999999999999 55543222 11222222111111 00
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHH-HHHHhHHhhhhcC
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFV-VGLGFPTLNLPYR 481 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~-~~~~~~~l~~~~g 481 (483)
.. ..+............ ..+.......++.|.+|++.|++++|+.+..+++++.+ +|.+.+.+.|..|
T Consensus 344 ------~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 344 ------AG-NPTVDMACMIVIGFL-IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred ------cc-ChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 00 011111111111111 11222223345679999999999999999999998765 7999999988765
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.72 E-value=1.3e-15 Score=154.82 Aligned_cols=291 Identities=9% Similarity=-0.062 Sum_probs=175.5
Q ss_pred HHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------
Q psy3807 163 KDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------- 210 (483)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------- 210 (483)
.|.+.+++|.+.++. +|+.+.+.++..++.++.|+++||+||
T Consensus 29 ~p~i~~~l~~s~~~~------~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~ 102 (495)
T PRK14995 29 APTLSMTLGASGNEL------LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRA 102 (495)
T ss_pred HHHHHHHhCCCHhHH------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345566777766665 799999999999999999999999999
Q ss_pred ---------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH------h
Q psy3807 211 ---------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG------Y 257 (483)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~------~ 257 (483)
++..++......+|..+++.++.... +..+||+.|++.....++ .
T Consensus 103 l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~--~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 103 LLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL--EHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccCChHHHHHHHHHHHHHHHHHHHH
Confidence 44556666667777777877764333 457899999887332221 1
Q ss_pred ccCCChHHH---HHHHH-------------HHh---CCc-chHHHHH-------HHHH-HHHHhhcccccchhhhhccCC
Q psy3807 258 NTGVINAPE---KVTLR-------------KLR---AST-QIEVDIE-------EMRV-EQIAQQSESKISMSELLCSST 309 (483)
Q Consensus 258 ~~~~~~~~~---~~~l~-------------~~~---~~~-~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~ 309 (483)
..++++++. .+... .+. ... +...... .... ...+.+.+++.--.+++|+|.
T Consensus 181 ~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~ 260 (495)
T PRK14995 181 YVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRI 260 (495)
T ss_pred hCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcc
Confidence 111111100 00000 000 000 0000000 0000 001111112222246777766
Q ss_pred CchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHH
Q psy3807 310 LRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGM 388 (483)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~ 388 (483)
+....+..++... ......++.|.+++. .|+++.+++....+..+...++.++.+++.||+|||+.+..+..+.
T Consensus 261 ~~~~~~~~~~~~~-----~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~ 335 (495)
T PRK14995 261 ILSGVVMAMTAMI-----TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALS 335 (495)
T ss_pred cHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 5443322222211 234455667777665 6999999999999999999999999999999999999888887776
Q ss_pred HHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHH
Q psy3807 389 FIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFV 468 (483)
Q Consensus 389 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~ 468 (483)
+++.+.+..... +...+......++...+.+....+ ......+..|++.++.+.++.+....+++.+
T Consensus 336 ~~~~~~l~~~~~------------~~~~~~~~~~~~l~G~g~g~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~ 402 (495)
T PRK14995 336 ALSFYGLAMTDF------------STQQWQAWGLMALLGFSAASALLA-STSAIMAAAPPEKAAAAGAIETMAYELGAGL 402 (495)
T ss_pred HHHHHHHHHhcC------------CCchHHHHHHHHHHHHhHHHHHHH-HHHHHHhcCCHHhcchHHHHHHHHHHHHHHH
Confidence 666554433210 001111222223333333332222 3345567889999999999999999999999
Q ss_pred HHHHhHHhhhh
Q psy3807 469 VGLGFPTLNLP 479 (483)
Q Consensus 469 ~~~~~~~l~~~ 479 (483)
++.+.+.+++.
T Consensus 403 G~ai~g~i~~~ 413 (495)
T PRK14995 403 GIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHH
Confidence 99998888763
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.72 E-value=3.4e-17 Score=160.56 Aligned_cols=292 Identities=14% Similarity=0.108 Sum_probs=162.8
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
...+.+.+++|.+.++. +++.++..++..++.++.|+++||+||
T Consensus 16 ~~~~~~~~~~g~s~~~~------g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDL------GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAAL 89 (379)
T ss_pred hhhHHHHHHhCCCHhHH------HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 34456777778776655 799999999999999999999999999
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHH-HHccccccCCCCchhHHHHHHHHHHHH----h
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQ-ILGIEPILGTDEGWPVLLAMLGMFQFG----Y 257 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~w~~~~~~~~i~~~~----~ 257 (483)
+...+..+.+..+|..+++ .++... ....+||..+.+.++..++ .
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 90 WALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGI--AELYSWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred HHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHH
Confidence 3344455555566666666 232211 1346799888776433222 1
Q ss_pred c--cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHh
Q psy3807 258 N--TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYY 335 (483)
Q Consensus 258 ~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (483)
. .+.++++.. .++.+ ++.+++.++.+++.+++.+..+...++++|+|..+...+...+.. . .......+
T Consensus 168 ~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~ 238 (379)
T TIGR00881 168 FLLLRDSPQSCG--LPPAE--EMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVY----V-VRTGILDW 238 (379)
T ss_pred heeeCCCccccc--cCccc--cCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHH----H-HHHHHHHH
Confidence 1 121111100 00000 000000000000000111111223455666665443222222211 1 23444555
Q ss_pred HHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC-ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 336 STALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG-RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 336 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g-rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
.|.++ +..|.+..+.+.......++.+++.++.+++.||.. ||+... ...........+....... .
T Consensus 239 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~ 307 (379)
T TIGR00881 239 SPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPL-AVFFMALIIVSLLVYWLNP----------A 307 (379)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHH-HHHHHHHHHHHHHHHhcCc----------c
Confidence 66665 456888888888888999999999999999999864 333222 1111111111111111100 0
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..........+.. .....+..+..+.+.+|.+|++.|+++.|+.+....++..+++.+.+.+.|.+|
T Consensus 308 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 308 ANPLMDLICLFAL-GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred hhHHHHHHHHHHH-HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 0111111222222 222233334445678899999999999999999999999999999999999876
No 30
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.72 E-value=5.5e-16 Score=151.19 Aligned_cols=260 Identities=10% Similarity=-0.027 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
+++.++..++.+++.++.|+++||+||
T Consensus 37 g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 116 (365)
T TIGR00900 37 SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAM 116 (365)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999
Q ss_pred ----------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH---hc--cCCChHHHHHHHHHHhC
Q psy3807 211 ----------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG---YN--TGVINAPEKVTLRKLRA 275 (483)
Q Consensus 211 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~---~~--~~~~~~~~~~~l~~~~~ 275 (483)
++..+..+....+|..+++.++.... +..+||..+.+.++..++ .. .+.++++.+ +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 187 (365)
T TIGR00900 117 LPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY--ATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-------E 187 (365)
T ss_pred HHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-------c
Confidence 34445555555566666665543222 345788888776443222 11 111110000 0
Q ss_pred CcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHH
Q psy3807 276 STQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTT 354 (483)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~ 354 (483)
+++.++ +.. ++.+..+++++|+|..+.......+... ........+.|++.++ .|.+..+.+...
T Consensus 188 ~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (365)
T TIGR00900 188 IQALSN---AVL-------RDTREGIKFVLKNPLLRTLLLLALLFNL----VFAPAIVALFPYVQSKYLGRGSTHYGWVL 253 (365)
T ss_pred ccccch---hHH-------HHHHhHHHHHHcCcHHHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHhCCchHHHHHHH
Confidence 000000 000 0011134566766655443332222222 1212222566777765 788888888888
Q ss_pred HHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhcccc
Q psy3807 355 IGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGP 434 (483)
Q Consensus 355 ~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (483)
...+++.+++.++.+++.||.+||+.+..+..+.+++...+.... + ..+...+..++...+.+. .
T Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~g~~~~~-~ 318 (365)
T TIGR00900 254 AAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP-------------P-NFPLFLVLWFAIGVGYGP-I 318 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc-------------h-hHHHHHHHHHHHHHHHHH-H
Confidence 888999999999999999999999988877666555554443321 0 012222222333333322 3
Q ss_pred ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 435 GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 435 ~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+....+..|..|++.|+++.|+.+...+++..+++.+.+.+.|.+|
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 319 NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556778899999999999999999999999999999999998775
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.72 E-value=2.7e-16 Score=159.77 Aligned_cols=294 Identities=10% Similarity=0.025 Sum_probs=177.9
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
...+.+.+++|.+.++. +++.+.+.++..++.++.|+++||+||
T Consensus 23 ~~~p~~~~~~g~s~~~~------~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQV------QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIF 96 (485)
T ss_pred HHHHHHHHhcCCChhhh------hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 34456677778776555 799999999999999999999999999
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH------
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG------ 256 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~------ 256 (483)
+...+.......+|..+++.++.... +..+||+.|++.+.+.++
T Consensus 97 ~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII--ENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc--cCcCceehhhhhhHHHHHHHHHHH
Confidence 45566666667777777776654322 457899988876433221
Q ss_pred hccCCChHHHHHHHHH-----------------HhCCcc---hHHHHH-HH--------HHHHHHhhcccccchhhhhcc
Q psy3807 257 YNTGVINAPEKVTLRK-----------------LRASTQ---IEVDIE-EM--------RVEQIAQQSESKISMSELLCS 307 (483)
Q Consensus 257 ~~~~~~~~~~~~~l~~-----------------~~~~~~---~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~ 307 (483)
...+.++++..+..++ .+++++ .+.+.. .. .....+.+++++..-.+++|+
T Consensus 175 ~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (485)
T TIGR00711 175 FILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKY 254 (485)
T ss_pred HHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcC
Confidence 1111111111000000 001100 000000 00 000011111122222457777
Q ss_pred CCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhH
Q psy3807 308 STLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLG 386 (483)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~ 386 (483)
++++...+..++..+ ......++.|.++++ .|+++.+++....+..++.+++.++.+++.||+|||+.+.++..
T Consensus 255 ~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~ 329 (485)
T TIGR00711 255 RNFTIGCVYMSLLGL-----GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI 329 (485)
T ss_pred CChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH
Confidence 766554333332222 234455677777765 68999899999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHH
Q psy3807 387 GMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIAN 466 (483)
Q Consensus 387 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~ 466 (483)
+.+++...+..... .+...+.......+...+.+....+.. ....|..|++.|+++.|+.+....+++
T Consensus 330 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~ 397 (485)
T TIGR00711 330 LYAVGFYWRAFTFT-----------PDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSLSNFTRQLGG 397 (485)
T ss_pred HHHHHHHHHhccCC-----------CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHHHHHHHHHHH
Confidence 77666655442110 011111122222222333332222332 344577899999999999999999999
Q ss_pred HHHHHHhHHhhhh
Q psy3807 467 FVVGLGFPTLNLP 479 (483)
Q Consensus 467 ~~~~~~~~~l~~~ 479 (483)
.+++.+.+.+.+.
T Consensus 398 ~ig~~i~g~~~~~ 410 (485)
T TIGR00711 398 SIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998888763
No 32
>PRK03545 putative arabinose transporter; Provisional
Probab=99.71 E-value=1.7e-15 Score=149.37 Aligned_cols=267 Identities=13% Similarity=0.057 Sum_probs=162.7
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
|.+.+++|.+.++. ++..+.+.++..++.++.|.++||+||
T Consensus 33 ~~l~~~~~~s~~~~------g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 33 SDIAQSFHMQTAQV------GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHHhHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 56777888876655 799999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhccCCChHH
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAP 265 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~~ 265 (483)
++..++...+..+|..+++.++.... +..+||+.|.+.++..++...-
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~--~~~gw~~~f~~~~~~~~l~~~~----- 179 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG--QYLGWRTTFLAIGGGALITLLL----- 179 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH--HHhcHHHHHHHHHHHHHHHHHH-----
Confidence 45666666777777777776653222 4568999998876544332100
Q ss_pred HHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCC
Q psy3807 266 EKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGL 345 (483)
Q Consensus 266 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 345 (483)
....++++++.+ +++..+.++++|+|.++......++... .......+..|++.++.|.
T Consensus 180 ---~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~g~ 238 (390)
T PRK03545 180 ---LIKLLPLLPSEH--------------SGSLKSLPLLFRRPALVSLYLLTVVVVT----AHFTAYSYIEPFVQQVAGL 238 (390)
T ss_pred ---HHHhCCCCCCCC--------------cchHHHHHHHHhCcHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCC
Confidence 000000000000 0000123457777665443332222211 1122233334444445788
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 346 SEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 346 s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
+..+.+......+++.+++.++.+++.||++||+.. .+..+..++...+.... . ..+.......+
T Consensus 239 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~------------~~~~~~~~~~l 303 (390)
T PRK03545 239 SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--N------------SEWHLSVLSIF 303 (390)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--c------------hHHHHHHHHHH
Confidence 888888888888999999999999999999988654 33333333332221110 0 11122222222
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...+. .+.++.......|..| +.|+++.|+.+...+++..+++.+.+.+.|.+|
T Consensus 304 ~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g 357 (390)
T PRK03545 304 WGIAI-MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG 357 (390)
T ss_pred HHHHH-hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 22222 2223333455667766 688999999999999999999999999998775
No 33
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=3.3e-15 Score=141.76 Aligned_cols=269 Identities=14% Similarity=0.076 Sum_probs=181.2
Q ss_pred HHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------
Q psy3807 163 KDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------- 210 (483)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------- 210 (483)
.|.+.+++|++.... |+..+++.++..+++++...++||+.|
T Consensus 36 Lp~iA~dl~vs~~~a------G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~ 109 (394)
T COG2814 36 LPPIAADLGVSEGAA------GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARA 109 (394)
T ss_pred hHHHHHHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 466778888887777 899999999999999999999999999
Q ss_pred --------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhccCCChH
Q psy3807 211 --------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINA 264 (483)
Q Consensus 211 --------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~ 264 (483)
++.++....+..++..++..++.+ .++..|||..|.+.+...++.+.-
T Consensus 110 ~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~--ig~~~GWR~~F~~ia~l~ll~~~~---- 183 (394)
T COG2814 110 LAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF--LGQLFGWRATFLAIAVLALLALLL---- 183 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH--HHHHhhHHHHHHHHHHHHHHHHHH----
Confidence 556666666666666666665542 236789999999986655443200
Q ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcC
Q psy3807 265 PEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSG 344 (483)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 344 (483)
....+. +++ ..++.+.+..+..+++|+|+.+..+....+.. . ..+..++|..|.+.+..|
T Consensus 184 ----~~~~lP-~~~-----------~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~-~---g~F~~ftYi~P~L~~v~g 243 (394)
T COG2814 184 ----LWKLLP-PSE-----------ISGSLPGPLRTLLRLLRRPGVLLGLLATFLFM-T---GHFALYTYIRPFLESVAG 243 (394)
T ss_pred ----HHHhCC-Ccc-----------CCCCCCcchhHHHHHhcCchHHHHHHHHHHHH-c---chhhhHHhHHHHHHHccC
Confidence 000000 000 00011111123566788887766544433332 2 223455666777777789
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHH
Q psy3807 345 LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISIL 424 (483)
Q Consensus 345 ~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (483)
++.....+....++++.++|+.++|++.|| +.|+.+.....++.+..+.+..... ..+.......
T Consensus 244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~--------------~~~~~~~~~~ 308 (394)
T COG2814 244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGA--------------SPALALALLF 308 (394)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcc--------------hHHHHHHHHH
Confidence 999999999999999999999999999999 8888887776777766666544321 1122222222
Q ss_pred HHHHHhccccccc-cceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 425 GFVVFFAVGPGSI-PWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 425 ~~~~~~~~~~~~~-~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+ .++..+..+. .....+| .-++.++.+.+++....+++..++..+.+.++|.+|
T Consensus 309 ~--wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g 363 (394)
T COG2814 309 L--WGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG 363 (394)
T ss_pred H--HHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2 3333322222 2233344 336889999999999999999999999999999876
No 34
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.69 E-value=1.7e-15 Score=149.44 Aligned_cols=269 Identities=7% Similarity=-0.081 Sum_probs=164.5
Q ss_pred HHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------
Q psy3807 163 KDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------- 210 (483)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------- 210 (483)
.|.+++++|.+.++. +++.+.+.++..+++++.|+++||+||
T Consensus 32 lp~i~~~~~~s~~~~------g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 32 LPQLRQASGMSFSVA------ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred HHHHHHHhCCCHHHH------HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 456677777775554 899999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhccCCChHH
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAP 265 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~~ 265 (483)
+...+....+...|..+++.++.... ....+||..+.+.++..++...-
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~-~~~~~w~~~~~~~~~~~~~~~~~----- 179 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLV-QHSETWYQTLAWWALPAVVALFA----- 179 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHH-----
Confidence 44555555555566666665543221 12247988765543332221100
Q ss_pred HHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCC
Q psy3807 266 EKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGL 345 (483)
Q Consensus 266 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 345 (483)
. +...+++++ + ++++ +.+..+.+++++.+. ..+...+.. .++.....+.|.++++.|.
T Consensus 180 -~--~~~~~~~~~-~------------~~~~-~~~~~~~l~~~~~~~----l~~~~~~~~-~~~~~~~~~lp~~l~~~g~ 237 (393)
T PRK09705 180 -W--WWQSAREVA-S------------SHKT-TTTPVRVVFTPRAWT----LGVYFGLIN-GGYASLIAWLPAFYIEIGA 237 (393)
T ss_pred -H--HHHhcCCCc-c------------ccCC-CcCCcccccCHhHHH----HHHHHHHHH-HHHHHHHHHHHHHHHHcCC
Confidence 0 000000000 0 0000 011223344443222 122222222 2445666677777778899
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 346 SEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 346 s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
+..+++....+.+++.+++.++.+++.||++||+....+..+..++...+... + .... ... ..+
T Consensus 238 s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~---~----------~~~~-~~~--~~l 301 (393)
T PRK09705 238 SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL---P----------LQLP-VLW--AMV 301 (393)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc---c----------chHH-HHH--HHH
Confidence 99889999999999999999999999999999998888766665554433221 1 0011 111 112
Q ss_pred HHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 426 FVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
...+.+. ..+.......+.+ |++.|++..|+.+..++++..++|.+.+.+.|..|+
T Consensus 302 ~g~g~g~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 302 CGLGLGG-AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HHHhccc-hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222222 2233333444555 567899999999999999999999999999998874
No 35
>KOG0569|consensus
Probab=99.68 E-value=2.3e-16 Score=154.18 Aligned_cols=207 Identities=25% Similarity=0.328 Sum_probs=137.7
Q ss_pred CccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhh------------------cccccccc-cccc
Q psy3807 1 MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLL------------------DSRESDLH-RSEL 61 (483)
Q Consensus 1 ~yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~------------------~sp~~l~~-~~~~ 61 (483)
+|++|++|++.||.++++.+.+..+|.+++..++....+.++..|++.+ ||||||.. ||++
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~ 218 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDE 218 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCH
Confidence 5899999999999999999999999999999988765567888899987 99999999 8999
Q ss_pred ccccccchhHHHHHHHHHhhccCCCCCccc---HHHHHhhhcc--C--------CCch-hHHHHHHHHHHhhhhhhcccc
Q psy3807 62 ENYTFLPFSVMLAVFWLFTYKKVPETKNKT---FEEIVALFRT--D--------DGLT-FHLTYTILSAMLGMFQFGYNT 127 (483)
Q Consensus 62 ~~~~f~~~~~~~a~~~~~~~~~~~e~~~~~---~~~~~~~~~~--~--------~~~~-~~~~~~~~~~~~~~~~~g~~~ 127 (483)
|| |...+..+|+..+++++. .++.++...+ + ++++ ++.....+.........|.+.
T Consensus 219 ~~----------A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~a 288 (485)
T KOG0569|consen 219 EE----------ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINA 288 (485)
T ss_pred HH----------HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcce
Confidence 99 999999988654322111 1111111111 0 0111 122223333444444567766
Q ss_pred ccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy3807 128 GVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADK 207 (483)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr 207 (483)
..+|+..+++ ..|++.++. .+.+....+...+.++++.++.||
T Consensus 289 i~~Yst~i~~-------------------------------~aG~~~~~a------~~an~~~g~v~~~~t~~~~~lid~ 331 (485)
T KOG0569|consen 289 IFFYSTSIFK-------------------------------TAGFTPEEA------QYANLGIGIVNLLSTLVSPFLIDR 331 (485)
T ss_pred eHHHHHHHHH-------------------------------HcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6665444443 334444444 477777788888999999999999
Q ss_pred cCCchHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH
Q psy3807 208 FGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG 256 (483)
Q Consensus 208 ~GR~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~ 256 (483)
.|||.++........+...+....-... .....|...+.+.++....
T Consensus 332 ~gRRpLll~~~~~~~~~~~~~~~~~~l~--~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 332 LGRRPLLLISLSLMAVALLLMSIALFLS--NSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHH
Confidence 9999988887777766665554432111 1111577666555444433
No 36
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.68 E-value=3.8e-15 Score=145.00 Aligned_cols=137 Identities=10% Similarity=-0.041 Sum_probs=93.6
Q ss_pred HHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc-CChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 329 INAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM-GRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
+.....+.|.++++.|.+..+.+.......++.+++.++.+++.||+ +||+.+..+..+++++.+.+.....
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 285 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM------- 285 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-------
Confidence 34556677888888899988888899999999999999999999999 4666666666666665544433210
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeec-cccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITA-ELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
+ ... . ...++..+.+. ..+....... +..+++.+++..++.+.+++++..++|.+.+.+.|..|.
T Consensus 286 -----~--~~~-~-~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 286 -----H--GLW-A-WALVLGLGQGG-AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred -----h--HHH-H-HHHHHHHhhhh-HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0 111 1 11222222211 1223223333 444567789999999999999999999999999998774
No 37
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.68 E-value=8.1e-15 Score=144.48 Aligned_cols=168 Identities=18% Similarity=0.142 Sum_probs=105.0
Q ss_pred cchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC
Q psy3807 299 ISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR 377 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 377 (483)
.+.++.+++++ +.+.......+.... .......+.|.++ ++.|.+..+.+.......+...++.++.+++.||+||
T Consensus 208 ~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (394)
T TIGR00883 208 GPIRETLTKHR--KPFLLGLGLVIATTT-TFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGR 284 (394)
T ss_pred CCHHHHHHhch--HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 35666775543 223333333333332 3344556667776 5678888888888888899999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHH
Q psy3807 378 RTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSI 457 (483)
Q Consensus 378 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~ 457 (483)
|+.+..+..+..+............ + ..+...........+.+. ..+....+.+|.+|++.|+++.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 285 RPVLIIFTVLAALLAVPLLMALLDS----------G-SFTLFFFLVLGLALIGGM-YTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC----------C-chHHHHHHHHHHHHHHHH-HhhhHHHHHHHhCCccceeeEeee
Confidence 9987755444433322111111000 0 112222222222222222 234456788999999999999998
Q ss_pred HHHH-HHHHHHHHHHHhHHhhhhcC
Q psy3807 458 AVLV-NWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 458 ~~~~-~~~~~~~~~~~~~~l~~~~g 481 (483)
...+ ..++..++|.+.+.+.|..|
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 6544 55788899999999998876
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.67 E-value=7.8e-15 Score=145.21 Aligned_cols=163 Identities=13% Similarity=0.069 Sum_probs=101.5
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTL 380 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~ 380 (483)
+++++|+|+.+.. .+..+++. .+......+.|.+.++.|++..+.........++..++.++.++++||+|||+.
T Consensus 215 ~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 289 (402)
T TIGR00897 215 ATILFTNPNVLLG----GMVRIINT-IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT 289 (402)
T ss_pred HHHHHcChhHHHH----HHHHHHHH-HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 4456766654332 22222222 244556677888888899998888887788889999999999999999998887
Q ss_pred HH-hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHH
Q psy3807 381 HL-YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAV 459 (483)
Q Consensus 381 l~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~ 459 (483)
+. .+...+.++.+.+....... ....+...+..++...+.+ +..+.. ....|..| +.|+++.|+.+
T Consensus 290 ~~~~~~l~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~G~~~~-~~~~~~-~~~~~~~~-~~~g~~~g~~~ 356 (402)
T TIGR00897 290 VRWFGGVGCGIFTLALYYIPQHF----------GHSFAVALIIAIALGIFLA-GYVPLA-AVFPTLAP-KHKGAAMSVLN 356 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc----------CCcHHHHHHHHHHHHHHHH-HHHHHH-HHHHhhCc-chhHHHHHHHH
Confidence 64 23333333322222111000 0011122222222222222 122332 34567655 58999999999
Q ss_pred HHHHHHHHHHHHHhHHhhhhcC
Q psy3807 460 LVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~~~g 481 (483)
....+++.++|.+.+.++|..|
T Consensus 357 ~~~~lg~~~gp~i~g~l~~~~g 378 (402)
T TIGR00897 357 LSAGLSAFLAPAIAVLFIGFFG 378 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999998866
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.66 E-value=1.5e-14 Score=141.75 Aligned_cols=266 Identities=14% Similarity=0.084 Sum_probs=156.5
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
..++.++++++|.+..+. +++.+...++..+.+++.|.++||+||
T Consensus 18 ~~l~~~l~~~~g~s~~~~------g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMI------GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLL 91 (375)
T ss_pred hHHHHHHHcccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 456667778888775554 788889999999999999999999997
Q ss_pred ----------------------------chH----hhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc
Q psy3807 211 ----------------------------GGL----GTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN 258 (483)
Q Consensus 211 ----------------------------~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~ 258 (483)
++. .+.......+|..+++.++.... +..+||+.|++.+++.++..
T Consensus 92 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~--~~~~~~~~f~~~~~~~~~~~ 169 (375)
T TIGR00899 92 VLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA--LGFGFTVMFLTAALAFVLCG 169 (375)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH--HhcccHHHHHHHHHHHHHHH
Confidence 111 23333344556666655543222 34679988887755432211
Q ss_pred ------cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHH
Q psy3807 259 ------TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAV 332 (483)
Q Consensus 259 ------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (483)
.++.+++. ++ ++++.+.++.+++++.+.......+.+. .....
T Consensus 170 ~~~~~~~~~~~~~~---------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 218 (375)
T TIGR00899 170 VLVWLFLPSYPRGA---------PG-----------------ALTRLEVRGLLASRDTRLLFVACTLMWG-----CNILY 218 (375)
T ss_pred HHHHHhCCCcccCc---------cc-----------------ccCcchhhhhhcCcchHHHHHHHHHHHH-----HHHHH
Confidence 11110000 00 0001112334555554432222222221 12222
Q ss_pred HHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 333 FYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 333 ~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
..+.|.++ ++.|.++.+.+...........++.++.+++.||+|||+.+.++..+..+....+... .
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~--------- 286 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD---N--------- 286 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH---H---------
Confidence 33445444 5678888777777666667778888999999999999998877655444333222111 1
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+.......+...+.+. ..+....+..|..|.+ |+++.++.+...+++..+++.+.+.+.+..|
T Consensus 287 ---~~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 287 ---SLWALLMLQLLNAIFIGI-LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred ---HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 112222222222222222 2244456778888865 5699999999999999999999999988765
No 40
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.65 E-value=5.5e-15 Score=147.97 Aligned_cols=142 Identities=10% Similarity=0.048 Sum_probs=87.1
Q ss_pred HHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 329 INAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 329 ~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
.+.+..|.|.++++ .|++..+++....+..+..+++.++++++.||+++++....+.....+..+........+
T Consensus 267 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 341 (438)
T TIGR00712 267 RYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNP----- 341 (438)
T ss_pred HHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcC-----
Confidence 34555677877765 688888888888889999999999999999999654322233222222111111111000
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHH-HHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIAN-FVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~g 481 (483)
....+.....++..... ..+..........|.+|++.|++++|+.+..+++++ .++|.+.+.+.|..|
T Consensus 342 -----~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 342 -----AGNPLVDMICMIVIGFL-IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred -----CCchHHHHHHHHHHHHH-HccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 00111111111111111 122222222456799999999999999999999875 689999999988765
No 41
>PRK10504 putative transporter; Provisional
Probab=99.65 E-value=1.7e-14 Score=145.96 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=108.6
Q ss_pred hhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHH
Q psy3807 303 ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLH 381 (483)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 381 (483)
+++|+|+++..+...++.++ +.....++.|++++. .|.++.+.+....+..+..+++..+.+++.||+|||+.+
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~ 330 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRI-----GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL 330 (471)
T ss_pred HHhcccchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 57777776543322222221 334556677888874 788888888888888888888889999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHH
Q psy3807 382 LYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLV 461 (483)
Q Consensus 382 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~ 461 (483)
..+..+..+...++..... .++ .+.......+...+.+....+ ......+..|.+.|+++.|+.++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 331 VATTLGLALVSLLFMLVAL-----------LGW-YYLLPFVLFLQGMVNSTRFSS-MNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred HHHHHHHHHHHHHHHhccc-----------ccc-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCHHhccchHHHHHHH
Confidence 8887767666554443210 011 111111122222222222222 346667889999999999999999
Q ss_pred HHHHHHHHHHHhHHhhhhcC
Q psy3807 462 NWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 462 ~~~~~~~~~~~~~~l~~~~g 481 (483)
..++..+++.+.+.+++..|
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998887664
No 42
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.65 E-value=4.7e-15 Score=147.77 Aligned_cols=160 Identities=8% Similarity=-0.095 Sum_probs=97.1
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh----hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE----SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG 376 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g 376 (483)
.++.+|+|+++...+..+..... +.....+.|.++. +.+.+..+.+.......+...++.++.+++.||+|
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 290 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACF-----YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIG 290 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHH-----HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44577777766544332222221 1112222233332 22444445566677777888899999999999999
Q ss_pred ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHH
Q psy3807 377 RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMS 456 (483)
Q Consensus 377 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g 456 (483)
||+.+..+..+.++..+.+.+.. ..+..+....+........ .+....+.+|.+|++.|++..+
T Consensus 291 ~~~~~~~~~~l~~~~~~l~~~~~---------------~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~a~~~~ 354 (420)
T PRK09528 291 AKNALLLAGTIMAVRIIGSGFAT---------------GPLEVSILKLLHAFEVPFL-LVGVFKYITLNFDVRLSATIYL 354 (420)
T ss_pred cchhhHHHHHHHHHHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCccceeeeee
Confidence 99998887777666655544321 1112222222222222111 1223456778899999998876
Q ss_pred H-HHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 457 I-AVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 457 ~-~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
. .++...++.++++.+.+.+.|.+|
T Consensus 355 ~~~~~~~~lg~~ig~~~~G~l~~~~G 380 (420)
T PRK09528 355 VGFQFAKQLGAVFLSTLAGNLYDSIG 380 (420)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 6 567788999999999999998765
No 43
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=2.3e-14 Score=141.88 Aligned_cols=134 Identities=11% Similarity=0.061 Sum_probs=89.9
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.....+.|.++++.|.+ +.........++.+++.++.+++.||+|||+.+..+..+..++.+.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------- 300 (399)
T PRK05122 233 GTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP---------- 300 (399)
T ss_pred HHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 33445556666666653 344555677888899999999999999999988877776666655443311
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++...+...+.+. ..+.......|..|++.|+++.|+.+....++..+++.+.+.+.+..|
T Consensus 301 -----~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 366 (399)
T PRK05122 301 -----SPWMALIGAALTGFGFSL-VFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG 366 (399)
T ss_pred -----cHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111222222222222222 223333455688899999999999999999999999999998887654
No 44
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.64 E-value=1.9e-14 Score=143.23 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=96.7
Q ss_pred HHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 332 VFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 332 ~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
...+.|.+.++ .|.+....+......+++.+++.++.+++.||.++++.+..+..+.+++.+.+... +
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~---~-------- 310 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM---P-------- 310 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc---c--------
Confidence 34456767666 78888888888888899999999999999999887777777766666555443321 0
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
..+...+..+++..+.+. ..+...+++.|..|++.|+++.|+.+...+++..+++.+.+.+.+..|.
T Consensus 311 ----~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~ 377 (417)
T PRK10489 311 ----MWILAVLCLALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTP 377 (417)
T ss_pred ----hHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhch
Confidence 111122222222222221 2244457788999999999999999999999999999999999988763
No 45
>KOG0255|consensus
Probab=99.63 E-value=5.6e-14 Score=143.99 Aligned_cols=266 Identities=18% Similarity=0.137 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
.+..+++.+|..+|+++.|.++||+||
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~ 200 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIV 200 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeec
Confidence 688899999999999999999999999
Q ss_pred -----chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc--------------cCCChHHHHHHHH
Q psy3807 211 -----GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN--------------TGVINAPEKVTLR 271 (483)
Q Consensus 211 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~--------------~~~~~~~~~~~l~ 271 (483)
+.........+..|....+..++. . .+||+.+++..++..+.+ .+++.+++.+.++
T Consensus 201 ~~~~R~~~~~~~~~~~~~~~~~~~~~a~~-~----~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~ 275 (521)
T KOG0255|consen 201 SPKQRGLALTLGGFFFVGGLMLPAGAAYI-T----RDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILK 275 (521)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHH-H----hhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHH
Confidence 333334223333333333333331 1 289999999866655321 5677788888887
Q ss_pred HHhCCc----chHHHHHHH-H-HHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH-HhhcC
Q psy3807 272 KLRAST----QIEVDIEEM-R-VEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL-FESSG 344 (483)
Q Consensus 272 ~~~~~~----~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 344 (483)
+..+.+ +.++..++. . +..+....+++..+.++++.++.++.++...+.++. ....+|.-.+ ....|
T Consensus 276 ~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~------~~~~y~gl~~~~~~lg 349 (521)
T KOG0255|consen 276 KIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV------FSLVYYGLSLNVSGLG 349 (521)
T ss_pred HHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH------HhHHHHhhhhhhhhcC
Confidence 765321 222222111 1 111122223446789999988888888887777743 2333333222 22233
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHH
Q psy3807 345 LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISIL 424 (483)
Q Consensus 345 ~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (483)
. +.+....+.+....++....+...|++|||.....+.....++++..++..... ..+.......
T Consensus 350 ~---~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 414 (521)
T KOG0255|consen 350 G---NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL------------GGWLHWILPL 414 (521)
T ss_pred c---hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc------------hhHHHHHHHH
Confidence 2 445566666779999999999999999999999999998888888777654322 1012222333
Q ss_pred HHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 425 GFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
+...+.+.+.... +.+++|++|+..|+.+.+.++..++++++++|++....
T Consensus 415 ~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 415 LGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444 78899999999999999999999999999999886544
No 46
>PRK03699 putative transporter; Provisional
Probab=99.63 E-value=2.3e-14 Score=141.45 Aligned_cols=264 Identities=10% Similarity=0.030 Sum_probs=155.0
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.+++|.+.++. +++.+...++..++.+++|+++||+||
T Consensus 31 ~~i~~~~~~s~~~~------g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l 104 (394)
T PRK03699 31 GPIAEYFNLPVSSM------SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFV 104 (394)
T ss_pred HHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHH
Confidence 44566777765544 788899999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc----cCC
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN----TGV 261 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~----~~~ 261 (483)
+...+..+....+|..+++.+.... .....+||+.|.+.+++.++.. ..+
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 183 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL-LARSIEWYWVYACIGLVYVAIFILTLFSE 183 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2223333344455555555443211 1234689999887654433211 111
Q ss_pred ChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHH-
Q psy3807 262 INAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALF- 340 (483)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (483)
.++.. ++++ +++++ . .++ ...+.+....+..++.. .+...+..|.|.++
T Consensus 184 ~p~~~--------~~~~------------~~~~~----~----~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~l~ 233 (394)
T PRK03699 184 FPALG--------KHAP------------KADKP----V----AKE-KWGIGVLFLAIAALLYI-LAQLTFISWVPEYAQ 233 (394)
T ss_pred Ccccc--------ccCc------------cccCc----c----ccc-cCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 11100 0000 00000 0 111 11222322222222222 23345566778777
Q ss_pred hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHH
Q psy3807 341 ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSV 420 (483)
Q Consensus 341 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (483)
++.|++..+.+.......++..++.++.++++||++||+.+.....+.++....+... ++..+ ..
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~-~~ 298 (394)
T PRK03699 234 KKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT--------------DDPSH-LL 298 (394)
T ss_pred HHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc--------------CCchH-HH
Confidence 4579998888888888889999999999999999999998876655544433332211 00111 11
Q ss_pred HHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 421 ISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...+....+ ..+..+....+..|..|. .+++..+.....+.++..++|.+.+.+.|..|
T Consensus 299 ~~~~~~G~~-~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g 357 (394)
T PRK03699 299 YAILGLGFF-SSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG 357 (394)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC
Confidence 112222221 222333344556676664 46788899999999999999999999988765
No 47
>PRK12382 putative transporter; Provisional
Probab=99.63 E-value=2.3e-14 Score=141.41 Aligned_cols=134 Identities=15% Similarity=0.065 Sum_probs=91.6
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.....+.|.++++.+.+ +.+......+++.+++.++.+++.||+|||+.+..+..+.+++.+.+... +
T Consensus 233 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~------- 300 (392)
T PRK12382 233 AVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA---P------- 300 (392)
T ss_pred hHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc---c-------
Confidence 34455666666766654 34455556677788999999999999999999888777766665543321 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+.......+...+.+. ..+.......|.+|++.|+++.|+.++...++..+++.+.+.+.|..|
T Consensus 301 -----~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 366 (392)
T PRK12382 301 -----TAWVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG 366 (392)
T ss_pred -----cHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111222222222222222 223344566788999999999999999999999999999999998765
No 48
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.62 E-value=4e-14 Score=139.31 Aligned_cols=264 Identities=15% Similarity=0.114 Sum_probs=159.8
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
|.+.+++|.+.++. +++.++..++..++.++.|+++||+||
T Consensus 29 p~~~~~~g~s~~~~------g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 102 (385)
T TIGR00710 29 PEIAADLSTPASIV------QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFV 102 (385)
T ss_pred HHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 44566677765554 899999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc------c
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN------T 259 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~------~ 259 (483)
++..+..+....+|..+++.++.... +..+||..+.+.++..++.. .
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL--VWLSWHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45566666777777777776653222 34689988877644332211 1
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
++++++. ++++. ++...+.++++|+|+.+...+...+.. ........+.|.+
T Consensus 181 ~~~~~~~--------~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 232 (385)
T TIGR00710 181 PETLPYE--------ARIQI---------------STYFETFLLLLKSKMFWGYALIYGASF-----GGFFAFFSGAPFV 232 (385)
T ss_pred CCCCCCc--------ccCCH---------------HHHHHHHHHHHcCchhHHHHHHHHHHH-----HHHHHHHHcChHH
Confidence 1110000 00000 000112445666666554332222211 1234444555666
Q ss_pred Hh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHH
Q psy3807 340 FE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYL 418 (483)
Q Consensus 340 ~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (483)
++ +.|.++.+.+.......+..+++.++.+++.||+|||+.+..+..+..++...+....... .. ....
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~ 302 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG---------LG-SWAM 302 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc---------cc-hHHH
Confidence 54 6788888888888888999999999999999999999998887776666655544322110 00 0111
Q ss_pred HHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHH
Q psy3807 419 SVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPT 475 (483)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 475 (483)
......+...+.+. ..+.......|..| +.|+++.++.+...+.++.+.+.+.+.
T Consensus 303 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 303 IIGPMMFVGIGNSM-ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111222222222 22334456678777 578999999998888766666666553
No 49
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.62 E-value=7.8e-14 Score=137.49 Aligned_cols=265 Identities=14% Similarity=0.023 Sum_probs=158.6
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.+++|.+.++. ++..+...++..++.++.|.++||+||
T Consensus 44 ~~~~~~~g~s~~~~------g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 117 (394)
T PRK10213 44 TPMAQDLGISEGVA------GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRAC 117 (394)
T ss_pred HHHHHHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 34567777776655 788889999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---cCCC
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---TGVI 262 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---~~~~ 262 (483)
+...+......++|..+++.++.... +..+||+.|++.++..++.. .+..
T Consensus 118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~--~~~gw~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG--ELIGWRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 44555666666777777776654322 45689999988754443211 1111
Q ss_pred hHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh
Q psy3807 263 NAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES 342 (483)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
+++ ++ + +++.+.+.++.+|+|..+...+. .+.... ..+....+..|.+.++
T Consensus 196 p~~-----------~~-~-------------~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~---~~~~~~~~~~p~~~~~ 246 (394)
T PRK10213 196 PSL-----------PG-E-------------PSHQKQNTFRLLQRPGVMAGMIA-IFMSFA---GQFAFFTYIRPVYMNL 246 (394)
T ss_pred CCC-----------Cc-c-------------cccchhHHHHHhcCHHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHh
Confidence 110 00 0 00001123456665554432222 111111 1122233445777788
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHH
Q psy3807 343 SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVIS 422 (483)
Q Consensus 343 ~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (483)
.|++..+.+......+++.+++.++.+++.||.+| +.+..+..+..++...+.... . ..+.....
T Consensus 247 ~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~--~------------~~~~~~~~ 311 (394)
T PRK10213 247 AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWG--S------------DKIVATGV 311 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHh--h------------hHHHHHHH
Confidence 89998888888888899999999999999999544 444333333333322222211 0 11222223
Q ss_pred HHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 423 ILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
..+...+++... +....+..+..| +.++...++...+..++..+++.+.+.+.|..|.
T Consensus 312 ~~l~G~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~ 369 (394)
T PRK10213 312 AIIWGLTFALVP-VGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGL 369 (394)
T ss_pred HHHHHHHHHhhh-HHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 333333333222 222334556667 4466777888888899999999999999997763
No 50
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.61 E-value=8.2e-15 Score=142.19 Aligned_cols=267 Identities=16% Similarity=0.182 Sum_probs=167.2
Q ss_pred HHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-------------------------------
Q psy3807 162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------- 210 (483)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------- 210 (483)
++..+.+++|.+.++. +++.++..++..++.++.|+++||+||
T Consensus 19 ~~~~~~~~~~~s~~~~------~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (352)
T PF07690_consen 19 LPLYLAEELGLSPSQI------GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIAR 92 (352)
T ss_dssp HH-HHHCCSTTTSHCH------HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhc
Confidence 3336777888776665 799999999999999999999999999
Q ss_pred ---------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh-----c
Q psy3807 211 ---------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY-----N 258 (483)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~-----~ 258 (483)
++..+..+....+|..+++.++.... +..+||+.+++.++..++. .
T Consensus 93 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~--~~~~~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 93 FLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI--SYFGWRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHCHHCCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh--hccccccccccccchhhhhhhhHhh
Confidence 56667777778888888877764332 4567998888875444332 1
Q ss_pred -cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhccccc-chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhH
Q psy3807 259 -TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKI-SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYS 336 (483)
Q Consensus 259 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (483)
.+.++++.++ +++.+++ ++++.+.. .++++++++..+ ..+...+... ........+.
T Consensus 171 ~~~~~~~~~~~-------~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~ 229 (352)
T PF07690_consen 171 FLPEPPPPRER-------ESPKESE---------SKKPKPLKPGFKSLFKNPVLW-ILLIAFFLFF----FVFSGFSFFL 229 (352)
T ss_dssp CC---STTTT---------SSTTTT-----------HHHCCCH-CTHHHHHHCCH-HHHHHHHHHH----HHHHHHHHHH
T ss_pred hhhhccccccc-------ccccccc---------cccccccccccccccccchhh-hhhhhhhHHH----HHHHHhhccc
Confidence 1111110000 0000000 00111111 256666666654 2222222222 1334566777
Q ss_pred HHH-HhhcCCC-CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhh
Q psy3807 337 TAL-FESSGLS-EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDW 414 (483)
Q Consensus 337 ~~~-~~~~g~s-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
|.+ .+..|.+ ..+.+......++...++.++.+++.||+++|+..........+..+.+.......
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 297 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSS------------ 297 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHC------------
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhh------------
Confidence 776 5667888 56777778888999999999999999999998777766665555554444322110
Q ss_pred HHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHH
Q psy3807 415 MSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVG 470 (483)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~ 470 (483)
..........+...+.+. ..+....+..|..|++.|+++.|+.+....++..++|
T Consensus 298 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGI-VFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 112222222233332222 3455678889999999999999999999999999886
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.61 E-value=1.6e-13 Score=134.90 Aligned_cols=159 Identities=12% Similarity=0.008 Sum_probs=105.0
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
+.++.+|+|.++... ..++... ..+.....+.|.++++.|.+..+.+.......+..+++.+..+++.||+|||+
T Consensus 192 ~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 266 (381)
T PRK03633 192 SIWPMLKLRQARLGV-NGCIISG----IVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL 266 (381)
T ss_pred CHHHHHHhcchHHHH-HHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH
Confidence 445677777654322 1122111 12233445678888888888888888888888999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHH
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAV 459 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~ 459 (483)
.+..+.....++.+.+. . .. . ......++... .....|.......|..|++.++...+..+
T Consensus 267 ~l~~~~~~~~~~~~~~~--~-~~-------------~--~~~~~~l~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 327 (381)
T PRK03633 267 VLRVQVFVVILGSIAML--S-QA-------------A--MAPALFILGAA-GFTLYPVAMAWACEKVEHHELVAMNQALL 327 (381)
T ss_pred HHHHHHHHHHHHHHHHh--h-hH-------------H--HHHHHHHHHHH-HHhHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 98877766666544332 0 00 0 11111111111 12233555566778888888888888888
Q ss_pred HHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 460 LVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
....++..++|.+.+.+.|.+|.
T Consensus 328 ~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 328 LSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc
Confidence 88899999999999999987763
No 52
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.61 E-value=5.4e-14 Score=138.25 Aligned_cols=270 Identities=13% Similarity=-0.055 Sum_probs=168.0
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
.++|.++ +++|.+.++. +++.++..++..+++++.|.++||+||
T Consensus 25 p~l~~~l-~~~g~s~~~i------g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 97 (382)
T TIGR00902 25 PFFPAWL-KGIGLGEEMI------GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLL 97 (382)
T ss_pred HHHHHHH-HHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 4555555 4567665554 899999999999999999999999997
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh----
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---- 257 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---- 257 (483)
+...+......++|..+++.++.... +..+||..|.+..+.....
T Consensus 98 ~~~~~l~~~~~~~~~p~~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~--~~~g~~~~f~~~~~~~~~~~~~~ 175 (382)
T TIGR00902 98 FIAIGLFALFFSAGMPIGDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLI--GMFDEQNILAILTAGLAFMLIGF 175 (382)
T ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHH--HHcChhHHHHHHHHHHHHHHHHH
Confidence 22223333444455555554432221 3467888877663322111
Q ss_pred ccCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH
Q psy3807 258 NTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST 337 (483)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
..+.+.++ +.+++ ++++++..+.++++|+|+++...+...+.+. .......+.|
T Consensus 176 ~~~~~~~~------------~~~~~---------~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~-----~~~~~~~~~~ 229 (382)
T TIGR00902 176 LIKPTIPP------------KDAIP---------EDESQGDSAFIALLKNPMNLRFLAAVCLIQG-----AHAAYYGFSA 229 (382)
T ss_pred HcCCCCCC------------Ccccc---------ccccccchhHHHHHcChHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 11110000 00000 0001112245678887766543333222222 2344445666
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 338 ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 338 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
.++++.|.+....+.......+..+++..+.+++.||+|+|+++.++.....+..+.+.... ..+
T Consensus 230 ~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~---------------~~~ 294 (382)
T TIGR00902 230 IYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE---------------AFP 294 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh---------------hHH
Confidence 67788999998898888888899999999999999999999999988888887766554321 112
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHH-HHHHHHHHHHHHhHHhhhhcC
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVL-VNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~-~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+....+....++....+ ...++++. |++.|++++++.+. ...++..+++.+.+.+.|.+|
T Consensus 295 ~~~~~q~l~g~~~~~~~~~-~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLA-AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2233333334444433322 33566677 99999999999864 456889999999999998876
No 53
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.61 E-value=4.8e-14 Score=142.39 Aligned_cols=126 Identities=14% Similarity=0.052 Sum_probs=75.5
Q ss_pred HHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH-------HHHhhhHHHHHHHHHHHHHHHHHh
Q psy3807 332 VFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT-------LHLYGLGGMFIFSIFITISLLIKE 403 (483)
Q Consensus 332 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~-------~l~~~~~~~~i~~~~~~~~~~~~~ 403 (483)
+..+.|.++ ++.|++..++.....+.+++..++.+++++++||++||+ ...+...+..++.+.+.. .
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~----~- 345 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR----A- 345 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc----c-
Confidence 444555555 456999888999999999999999999999999998752 111111111111111110 0
Q ss_pred hhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhH
Q psy3807 404 FFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFP 474 (483)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 474 (483)
+ .....+..+.++..+...+. +..+.+..|+.| +.|+++.|+.+..+++++++++.+..
T Consensus 346 ---------~-~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~ 404 (476)
T PLN00028 346 ---------N-SLGAAIVVMILFSIFVQAAC-GATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF 404 (476)
T ss_pred ---------c-hHHHHHHHHHHHHHHHHHhh-hhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH
Confidence 0 11112222222222222222 234556667655 78999999999988888888887754
No 54
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.61 E-value=2.2e-14 Score=141.82 Aligned_cols=161 Identities=9% Similarity=-0.050 Sum_probs=96.1
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh----cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES----SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM 375 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~ 375 (483)
+.++++|+|+.+...+..+.... .+.....+.+.++++ .+.+....+.......+...++....+++.||+
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~ 281 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVAC-----VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI 281 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46778887765443322222111 122222233444333 233444556666777788888999999999999
Q ss_pred CChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHH
Q psy3807 376 GRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAM 455 (483)
Q Consensus 376 grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~ 455 (483)
|||+.+.++..+.++........ . ..+......++...+.... ......+..|..|++.++++.
T Consensus 282 g~~~~l~~~~~l~~l~~~~~~~~---~------------~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~at~~ 345 (396)
T TIGR00882 282 GAKNALLIAGTIMSVRIIGSSFA---T------------TALEVVILKMLHAFEVPFL-LVGCFKYITSQFDVRLSATIY 345 (396)
T ss_pred ccchhHHHHHHHHHHHHHHHHhc---C------------ChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCcceEEEee
Confidence 99999888777666655443321 0 1112222222222221111 112334567778899998887
Q ss_pred HH-HHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 456 SI-AVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 456 g~-~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+. .+....+++++++.+.+.+.|..|
T Consensus 346 ~~~~~~~~~lg~~~~~~l~G~l~~~~G 372 (396)
T TIGR00882 346 LIGFQFAKQLAMIFLSTLAGNMYDSIG 372 (396)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhcc
Confidence 76 567899999999999999998765
No 55
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.60 E-value=7.5e-14 Score=137.22 Aligned_cols=264 Identities=12% Similarity=0.032 Sum_probs=152.5
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.+++|.+.++. ++..+...++..+++++.|+++||+||
T Consensus 27 ~~~~~~~g~s~~~~------g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l 100 (382)
T PRK10091 27 TELAHDVGISIPAA------GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLV 100 (382)
T ss_pred HHHHHHcCCCHHHH------hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45667777776554 799999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---cCCC
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---TGVI 262 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---~~~~ 262 (483)
++..+....+..+|..+++.++... .+..+||+.|.+.++...+.. ....
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~gwr~~f~~~~~~~~~~~~~~~~~l 178 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL--SQEFSWRYTFLLIAVFNIAVLASIYFWV 178 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH--hhhccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2344444555556666655544322 235689999988755433221 0000
Q ss_pred hHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHH-HHHhHHHHHh
Q psy3807 263 NAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINA-VFYYSTALFE 341 (483)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 341 (483)
++.. ++++ .+. + ...+.+|++..+. ......+... +... ..+..|++.+
T Consensus 179 p~~~--------~~~~--~~~---~------------~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~ 228 (382)
T PRK10091 179 PDIR--------DEAK--GGL---R------------EQFHFLRSPAPWL----IFAATMFGNA-GVFAWFSYIKPYMMF 228 (382)
T ss_pred CCCC--------cccc--cCH---H------------HHHHHhcChHHHH----HHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 0000 0000 000 0 0012344433221 1111111111 2222 2333455555
Q ss_pred hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 342 SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 342 ~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
..|.++.+.+......+++.+++.++.+++.||+|+|+.+..+..+..++.+.+..... ..+....
T Consensus 229 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~--------------~~~~~~~ 294 (382)
T PRK10091 229 ISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG--------------MKTASLI 294 (382)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh--------------hHHHHHH
Confidence 67999888888889999999999999999999999999988877766665544332110 1111222
Q ss_pred HHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 422 SILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+....+......+.......+..|.+.++.+ ..+....+++.++|.+.+.+.|..+
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~ 352 (382)
T PRK10091 295 FAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGL 352 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHccc
Confidence 222222222111122222344455565555544 4467789999999999999998643
No 56
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.59 E-value=3e-14 Score=143.97 Aligned_cols=271 Identities=12% Similarity=0.012 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
|++.+.+.+++.++++++|+++||+||
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~ 158 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVK 158 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHh
Confidence 899999999999999999999999999
Q ss_pred -------chHhhHHHHHHHHHHHHHHHHccccccCCC-CchhHHHHHHHHHHHHhc------cCCChHHHHHHHHHHhCC
Q psy3807 211 -------GGLGTVNQLAVTLGLLISQILGIEPILGTD-EGWPVLLAMLGMFQFGYN------TGVINAPEKVTLRKLRAS 276 (483)
Q Consensus 211 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~w~~~~~~~~i~~~~~~------~~~~~~~~~~~l~~~~~~ 276 (483)
++..++.+.+..+|..+++.+..... .. .+||..|++.+++.++.. .++++++. +
T Consensus 159 ~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~--~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--------~- 227 (465)
T TIGR00894 159 WAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC--ESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--------P- 227 (465)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--------C-
Confidence 55666777777778777776653322 34 489999888755443321 11111110 0
Q ss_pred cchHHHHHHHHHHHHHh--hcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHH
Q psy3807 277 TQIEVDIEEMRVEQIAQ--QSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFT 353 (483)
Q Consensus 277 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~ 353 (483)
...++|.+.+++..+++ +.+.+..++++++++..+. ..+..++ +..+.+.+..|.|.+++ ..|++..+.+..
T Consensus 228 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~ 302 (465)
T TIGR00894 228 CISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWA----IWFAIFG-HFWLYTILPTYLPTFISWVLRVSGKENGLL 302 (465)
T ss_pred CCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhCcChHHhHHH
Confidence 00111111121111111 1112335677776654332 2222222 22344666677787765 478998888988
Q ss_pred HHHHHHHHHHHHHhHHHHhhccCChHHHH---hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHh
Q psy3807 354 TIGIGAVMVTMTIISIPLMDRMGRRTLHL---YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFF 430 (483)
Q Consensus 354 ~~~~~~~~~~g~~~~~~l~dr~grr~~l~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (483)
..+..++..++.+++++++||+++|+... .......++............ . ........+..+.+...+.
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~l~~~~~ 375 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP------Y-LSAAFYLTIIILTLANAVS 375 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH------H-cCCchHHHHHHHHHHHHHh
Confidence 88899999999999999999986442210 001111111111111100000 0 0001122222222222222
Q ss_pred ccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 431 AVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 431 ~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
+. ..+..+....|..|. .+|.+.|+.+..+.++++++|.+.+.+.+.
T Consensus 376 ~~-~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 376 SG-PLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred hh-hhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 22 222234455566665 899999999999999999999999988764
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.59 E-value=1.2e-13 Score=133.76 Aligned_cols=138 Identities=18% Similarity=0.088 Sum_probs=105.9
Q ss_pred hHHHHHHhHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH-HHHhhhHHHHHHHHHHHHHHHHHhhh
Q psy3807 328 GINAVFYYSTALFESS-GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT-LHLYGLGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~ 405 (483)
.......+.|.+.++. +.+..+.+.......++..++.++.+++.||+|||+ .+..+..+..++.+.+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------ 263 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP------ 263 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc------
Confidence 4466667777777765 888888889999999999999999999999999999 88888777777766555421
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+.......+...+. ....+....+..|..|++.|++..|+.+....++..+++.+.+.+.|..+
T Consensus 264 ---------~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~ 329 (352)
T cd06174 264 ---------SLALLLVALLLLGFGL-GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG 329 (352)
T ss_pred ---------cHHHHHHHHHHHHHHH-hccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 0122222223333333 33446677888999999999999999999999999999999999987654
No 58
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=9.1e-14 Score=137.07 Aligned_cols=271 Identities=15% Similarity=0.060 Sum_probs=158.4
Q ss_pred HHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------
Q psy3807 159 EKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------- 210 (483)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------- 210 (483)
..++++++++++|.+..+. +++.+...++.++++++.|+++||+||
T Consensus 27 ~~~l~~~l~~~~g~s~~~~------g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLI------GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVV 100 (395)
T ss_pred HHHHHHHHHHHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4677888888888776665 889999999999999999999999999
Q ss_pred ------------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---
Q psy3807 211 ------------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY--- 257 (483)
Q Consensus 211 ------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~--- 257 (483)
++..++.....++|..+++.++.... ..+|+.+|.+.++..++.
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~---~~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 101 LFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV---MQSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccCcHHHHHHHHHHHHHHH
Confidence 23334445555666666665543322 246887777664332221
Q ss_pred ----ccCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHH
Q psy3807 258 ----NTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVF 333 (483)
Q Consensus 258 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (483)
+++.++++ +++ + + +..+.++++|+|+++...+...+....... ......
T Consensus 178 ~~~~~~~~~~~~--------------~~~------~--~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~ 230 (395)
T PRK10054 178 IQIWVQRSEKAI--------------ATE------T--G----SVWSPSVLLQDKALLWFTCSGFLASFVSGA-FASCIS 230 (395)
T ss_pred HHHHHhcccccc--------------ccc------h--h----hhhhhhhhccCceehHHHHHHHHHHHHHHH-hhhhHH
Confidence 11111000 000 0 0 001124567777766544443332222110 001112
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
.|.+.. ++.+.+....+.......+...+.....+.+.||.++|+.+..+..+..++...+.....
T Consensus 231 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------- 296 (395)
T PRK10054 231 QYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN------------- 296 (395)
T ss_pred HHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-------------
Confidence 222221 233444444445555555566666778889999999999988887666666544432110
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
..+...+....+..+.. ...|.....+.|..|++.|+++.+..+ .++++..++|.+.+.++|..|+
T Consensus 297 -~~~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 297 -SLLLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred -HHHHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcCh
Confidence 11111222222222221 223445567788899999999998765 6889999999999999998874
No 59
>PRK11043 putative transporter; Provisional
Probab=99.58 E-value=1.5e-13 Score=136.18 Aligned_cols=268 Identities=17% Similarity=0.130 Sum_probs=153.9
Q ss_pred hhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCc----------------------------------
Q psy3807 166 YKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRG---------------------------------- 211 (483)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~---------------------------------- 211 (483)
+.+++|.+.++. ++..++..++..++.+++|+++||+||+
T Consensus 32 i~~~~~~s~~~~------g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 32 IQADLQTSASAV------SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HHHHHCCCHHHH------HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 556666665444 8999999999999999999999999991
Q ss_pred ------------------------hHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhccCCChHHHH
Q psy3807 212 ------------------------GLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEK 267 (483)
Q Consensus 212 ------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~~~~ 267 (483)
+..+..+....++..+++.++.... +..+||..+.+.++..++...-
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~--~~~g~~~~~~~~~~~~~~~~~~------- 176 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL--NHFGWQAIFATLFAITLLLILP------- 176 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCChHHHHHHHHHHHHHHHHH-------
Confidence 1112222223344444444432211 3457888777664433321100
Q ss_pred HHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCC
Q psy3807 268 VTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSE 347 (483)
Q Consensus 268 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 347 (483)
.....++++.+ + +++++.++++++|+++++...+...+.. ..+.....+.|.++++.|++.
T Consensus 177 --~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~p~~~~~~g~s~ 237 (401)
T PRK11043 177 --TLRLKPSKKAR-K-----------QSQDALTFKQLLKSKTYLGNVLIFAACS-----AAFFAWLTGSPFILEQMGYSP 237 (401)
T ss_pred --HHHcCCCCCcc-c-----------cchHHHHHHHHHcChhHHHHHHHHHHHH-----HHHHHHHHHhHHHHHHcCCCH
Confidence 00000000000 0 0001124566777665544332222111 123444556777888889988
Q ss_pred cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHH
Q psy3807 348 KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFV 427 (483)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
.+.+.......++..++.++.+++.||+++|+....+.....++.+.+....... ....+.......+..
T Consensus 238 ~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 307 (401)
T PRK11043 238 ADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS----------HPSLVPLLIPFCVMA 307 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc----------cCcHHHHHHHHHHHH
Confidence 8888777777888899999999999999999877665555555444333221111 001111222222222
Q ss_pred HHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 428 VFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 428 ~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.+.+. ..+.......|..| +.|+++.|+.++++..++..++.+.+.+.+.
T Consensus 308 ~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 308 AANGA-IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHH-HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 22222 22333344456666 5799999999999999999999998888763
No 60
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.56 E-value=2.4e-13 Score=134.92 Aligned_cols=273 Identities=11% Similarity=0.046 Sum_probs=153.3
Q ss_pred hhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------
Q psy3807 166 YKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------- 210 (483)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------- 210 (483)
+.+++|.+..+. ++..+.+.++..++.++.|.++||+||
T Consensus 39 ~~~~~~~s~~~~------~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 39 VVEDFNAGAEWV------PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQG 112 (406)
T ss_pred HHHHhCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 556667665444 788889999999999999999999999
Q ss_pred -----------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---cCCChH
Q psy3807 211 -----------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---TGVINA 264 (483)
Q Consensus 211 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---~~~~~~ 264 (483)
.+..+.......++..+++.++.... +..+||+.+++.++..++.. ....++
T Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 113 IGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI--HVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred hHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 12222333333344455554432221 34579888877644433211 000000
Q ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHH-hhc
Q psy3807 265 PEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALF-ESS 343 (483)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 343 (483)
+..+ ++.+.+.++ ...++++++++|.++...+... +... .......+.|.++ +..
T Consensus 191 ~~~~--------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~p~~~~~~~ 246 (406)
T PRK15402 191 TAGR--------VGEKLSLKE-----------LGRDYKLVLKNRRFVAGALALG----LVSL-PLLAWIALSPVILISGE 246 (406)
T ss_pred CCcc--------ccccccHHH-----------HHHHHHHHHcCcHHHHHHHHHH----HHHH-HHHHHHHHhHHHHHHHh
Confidence 0000 000000000 0113456676665433222211 1111 1122333456554 457
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHH
Q psy3807 344 GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISI 423 (483)
Q Consensus 344 g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (483)
|.++.+.+.......++.+++.++.+++.||+++|+.+.++....+++.+.+....... ....+......
T Consensus 247 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~ 316 (406)
T PRK15402 247 QLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS----------SHAYLWLTAGL 316 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc----------cccHHHHHHHH
Confidence 88877777777777778899999999999999999998888777666665554432111 00111122222
Q ss_pred HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
.++..+.+... +...... ...+++.|++..++.+....++..+++.+.+.+.+..++
T Consensus 317 ~~~g~g~~~~~-~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 317 SLYAFGIGLAN-AGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGN 373 (406)
T ss_pred HHHHHHHHHHh-hhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCch
Confidence 22222222222 2222222 223448899999999999999999999999888776553
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.56 E-value=7.9e-14 Score=140.05 Aligned_cols=135 Identities=14% Similarity=0.050 Sum_probs=88.7
Q ss_pred HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc--CChHHHHhhh--HHHHHHHHHHHHHHHHHhhhc
Q psy3807 331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM--GRRTLHLYGL--GGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grr~~l~~~~--~~~~i~~~~~~~~~~~~~~~~ 406 (483)
....+.|.+.++.|++..+.+....+.+++.+++.++.+++.||. ++|+...++. +..+++.+.+.. .
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~----~---- 330 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL----A---- 330 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH----h----
Confidence 334455666677899988888888889999999999999999974 3343333322 211222211111 0
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+ ..+..++..+++..+.+ ...+....+..|.+|++.++++.|+.+....++++++|.+.+.+.|..|
T Consensus 331 ------~-~~~~~~i~~~~~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 331 ------G-DYTGLVIYCIFFGLSFG-SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred ------c-hHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 0 11222222333333322 2334456777899999999999999999999999999999999888764
No 62
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.56 E-value=3e-13 Score=132.98 Aligned_cols=272 Identities=13% Similarity=-0.037 Sum_probs=158.3
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
.++|.++ +++|.+.++. |++.++..++..+++++.|.++||+||
T Consensus 25 p~l~~~l-~~~g~s~~~i------G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (382)
T PRK11128 25 PFWSVWL-KGQGYTPETI------GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLL 97 (382)
T ss_pred hhHHHHH-HhcCCCHHHH------HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3445555 4456655444 899999999999999999999999997
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc--c
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN--T 259 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~--~ 259 (483)
+...+.......+|..+++.++.... +..+||..|++.++...+.. .
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~--~~~g~~~~f~~~~~~~~~~~~~~ 175 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLV--SWFGEQAILWILTAGVASMLLGQ 175 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHH--HHcChhHHHHHHHHHHHHHHHHH
Confidence 11112222233344444444432211 23578888776543222111 0
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
..++++ +++.+++ ++.++...++++++|+|+++......++.... ......+.|.+
T Consensus 176 ~~~~~~----------~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~ 231 (382)
T PRK11128 176 LLRPTI----------MPQGESR---------QQESAGWPAWKALLKEPTVWRFLLCVSLLQGS-----HAAYYGFSAIY 231 (382)
T ss_pred HccCCC----------CCccccc---------cccccccchHHHHHcChhHHHHHHHHHHHHHH-----hHhHHHHHHHH
Confidence 000000 0000000 00111133577888888766544333333322 23333444556
Q ss_pred HhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH
Q psy3807 340 FESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS 419 (483)
Q Consensus 340 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
.++.|.+..+.+.......+..++...+.+++.||+|+|+.+..+....+++.+.+.... ..+..
T Consensus 232 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~ 296 (382)
T PRK11128 232 WQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT---------------ALPWL 296 (382)
T ss_pred HHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh---------------hHHHH
Confidence 677899888888888888888999999999999999999998888777776655443211 12222
Q ss_pred HHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHH-HHHHHHHHHHHhHHhhhhcC
Q psy3807 420 VISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLV-NWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~-~~~~~~~~~~~~~~l~~~~g 481 (483)
++..++...+++... +....+..+. |++.+++..+..+.. ..++..+++.+.+.+.|.+|
T Consensus 297 ~~~~~l~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 297 IVIQILHCGTFTVCH-LAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333333333333322 2233445566 455568888887644 45566899999999998865
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.55 E-value=2.6e-13 Score=133.99 Aligned_cols=260 Identities=17% Similarity=0.094 Sum_probs=148.0
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
|.+.+++|.+.++. ++..+...++..++.++.|+++||+||
T Consensus 27 p~~~~~~~~s~~~~------~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 100 (392)
T PRK10473 27 PRIAADLNASEAQL------HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFL 100 (392)
T ss_pred HHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 44555666654433 788899999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh------cc
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY------NT 259 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~------~~ 259 (483)
++..+..+....++..+++.++.... ...+||..+.+.++..++. ..
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~--~~~g~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM--LKFPWQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcChHHHHHHHHHHHHHHHHHHHHHc
Confidence 34445555555566666665543222 3467988887764332221 11
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
++++++. +++.+ ......++.+|+++++...+...+... .......+.|.+
T Consensus 179 ~~~~~~~---------~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 229 (392)
T PRK10473 179 KETRPAR---------APAAS---------------SKPRENSESLLNRFFLSRLVITTLSVT-----VILTFVNTSPVL 229 (392)
T ss_pred CCCCCcc---------cCCcc---------------chHHHHHHHHhCHHHHHHHHHHHHHHH-----HHHHHHHhCHHH
Confidence 1111000 00000 000112345555554443333222211 122233344554
Q ss_pred H-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHH
Q psy3807 340 F-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYL 418 (483)
Q Consensus 340 ~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (483)
+ ++.|++..+.+......+++.+++.++.+++.||+|||+.+..+..+..++.+.+..... ...
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 294 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS---------------HAV 294 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH---------------HHH
Confidence 4 567888878888888889999999999999999999999998887766666555443211 111
Q ss_pred HHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 419 SVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
......+...+.+.+... ....++.|.+.|+ |..++...++..+++.+.+.+.+.+|
T Consensus 295 ~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 295 SLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222222233332221 2334555655553 44445556666777777777776655
No 64
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.55 E-value=3e-13 Score=132.77 Aligned_cols=261 Identities=19% Similarity=0.237 Sum_probs=147.7
Q ss_pred hhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------------
Q psy3807 165 VYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------------- 210 (483)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------------- 210 (483)
.+.+++|.+.++. +++.++..++..++.++.|+++||+||
T Consensus 16 ~~~~~~~~s~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 89 (377)
T PRK11102 16 VIAADFGVSAGSV------QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLH 89 (377)
T ss_pred HHHHHhCCCHHHH------HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 3445567665544 788999999999999999999999999
Q ss_pred ------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh------ccC
Q psy3807 211 ------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY------NTG 260 (483)
Q Consensus 211 ------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~------~~~ 260 (483)
++..+..+....+|..+++.++.... ...+||..+.+.++..++. ..+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL--VWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45555666666677777776643222 3457998887764333221 111
Q ss_pred CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHH
Q psy3807 261 VINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALF 340 (483)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (483)
++.++.+ +++. +.+ +...++++++++++.+...+ ...+ .+.+......+.|.++
T Consensus 168 ~~~~~~~--------~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 221 (377)
T PRK11102 168 ETLPKER--------RQPF--HLR-----------TTIRNFASLFRHKRVLGYML----ASGF-SFAGMFSFLTAGPFVY 221 (377)
T ss_pred ccCcccc--------cCCC--ChH-----------HHHHHHHHHHcChHHHHHHH----HHHH-HHHHHHHHHHcCHHHH
Confidence 1111000 0000 000 00112345666654332211 1111 1223333344445444
Q ss_pred -hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH
Q psy3807 341 -ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS 419 (483)
Q Consensus 341 -~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
+..|.++.+.+.......++.+++.++.+++.||+|||+.+..+..+..+..+.+....... ...+..
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 290 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-----------LGFWAL 290 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hhHHHH
Confidence 55788988888888889999999999999999999999998887766554433332221110 011122
Q ss_pred HHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHH-HHHHHHHHH
Q psy3807 420 VISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNW-IANFVVGLG 472 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~-~~~~~~~~~ 472 (483)
......+....+. ..+....+..|..| +.|+++.++.+.... ++..+++.+
T Consensus 291 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 291 VVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222221 11222344567767 789999999877655 344444433
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=8.4e-13 Score=130.31 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=85.3
Q ss_pred HHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 332 VFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 332 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
...+.|.++ ++.|++..+.+.......++.+++.++.++++||+|||+.+..+.....+....+.. ..
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~-------- 303 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM---AH-------- 303 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---Hh--------
Confidence 344566655 457888777777766667778889999999999999998877665444333222111 00
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..+....+.....+... +....+..|.+|.+ |+++.++.+...+++..+++.+.+.+.|.+|
T Consensus 304 ----~~~~~l~~~~l~~~~~g~~~-~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g 368 (393)
T PRK15011 304 ----SPAILLGLQLLNAIYIGILG-GIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWN 368 (393)
T ss_pred ----hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111211111111211111 11234567988865 8999999999999999999999999988654
No 66
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.55 E-value=7.9e-13 Score=130.07 Aligned_cols=166 Identities=14% Similarity=0.077 Sum_probs=106.0
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
++.+.+|+|+.|...++. +..++++..+.++.|++.++ .++.........+..+...++.+++|+++||+|+|+
T Consensus 244 ~~~~vlk~~~~Wllslly-----~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLY-----LATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred HHHHHhCCCchhHHHHHH-----HHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 455678887655432222 23444566677788888766 444433333344556778888999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCC-----------
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQ----------- 448 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~----------- 448 (483)
++.++.+.+.++...+.... + .+....-+.....+.....+.+++-+++ +-++..++|.
T Consensus 318 vl~~~~i~~~i~~~~~~l~l--p-------~~~~~~~~~~~~~~~~l~~~~G~gngsv-fk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 318 VTLINFIFMAIFSALLFLTL--P-------GTGSGNFIAFYAVFMGLFLTAGLGSGST-FQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHh--c-------cccccHHHHHHHHHHHHHHHhcccchHH-HHhhHHHHhhhhhhccccccc
Confidence 99988877777654433321 1 0000111222333333334455555553 4566777774
Q ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 449 ----------GPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 449 ----------~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+.-|.++|+..+.+.+|+++.|..++...+..|
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g 430 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG 430 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC
Confidence 146788999999999999999999998887765
No 67
>PRK10133 L-fucose transporter; Provisional
Probab=99.55 E-value=3.6e-13 Score=134.37 Aligned_cols=158 Identities=12% Similarity=0.065 Sum_probs=99.3
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH-HHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST-ALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR 377 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 377 (483)
++++++|+|.++...+..++ ... +......|.+ ++++ ..|+++.+.+.......++.++|.++++++.||+||
T Consensus 250 ~~~~ll~~~~~~~~~l~~~~-~~~----~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~ 324 (438)
T PRK10133 250 SLSRLARIRHWRWAVLAQFC-YVG----AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAP 324 (438)
T ss_pred hHHHHHhCchHHHHHHHHHH-HHH----HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 35567877766543322212 111 2222233444 4444 469999999999999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHH
Q psy3807 378 RTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSI 457 (483)
Q Consensus 378 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~ 457 (483)
|+++..+..+.++.+...... . . . ..+..+.+...+.+. ..|..+....|.+|.+ .+++.++
T Consensus 325 ~~~l~~~~~~~~~~~~~~~~~---~----------~--~-~~~~~~~l~glg~~~-i~P~~~s~a~~~~~~~-~~~as~l 386 (438)
T PRK10133 325 HKVLAAYALIAMALCLISAFA---G----------G--H-VGLIALTLCSAFMSI-QYPTIFSLGIKNLGQD-TKYGSSF 386 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHc---C----------C--h-HHHHHHHHHHHHHHH-HHHHHHHHHHcccchh-hccchhH
Confidence 999887766655444332221 1 0 0 112222333333333 3355667777887764 5677777
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 458 AVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.. ...+++.+.+.+.+.+.|..|
T Consensus 387 ~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 387 IV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred Hh-HHhccchHHHHHHHHHHHhcc
Confidence 76 455788888888888888765
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=4.9e-13 Score=132.73 Aligned_cols=164 Identities=9% Similarity=0.001 Sum_probs=106.3
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCC--------cchhHHHHHHHHHHHHHHHhHHHHh
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSE--------KTAKFTTIGIGAVMVTMTIISIPLM 372 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~g~~~~~~l~ 372 (483)
.++++|+|+++..++..++..... .....+.|.++++.|.++ ...+.......+..+++.++.++++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~ 275 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPL-----QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFL 275 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHH-----HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788887765444444432221 222344455566666543 4457777777888999999999999
Q ss_pred hccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchh
Q psy3807 373 DRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRP 452 (483)
Q Consensus 373 dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~ 452 (483)
||+|||+++.++.++.+++...+..... ..+..+..+...++...+.+. ..+....+++|.+|++.|+
T Consensus 276 dr~g~r~~l~~~~~~~~v~~~l~~~~~~-----------~~~~~~~l~l~~~l~g~~~~~-~~~~~~~~i~~~~p~~~~g 343 (418)
T TIGR00889 276 KRFGIKKVMLLSLVAWALRFGFFAYGDP-----------EYFGYALLFLSMIVYGCAFDF-FNISGSVFVEKEVPVHIRA 343 (418)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCc-----------chhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHH
Confidence 9999999999888877776544443100 000111122222222222222 2233456788999999999
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhHHhhhhcC
Q psy3807 453 AAMSIAV-LVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 453 ~~~g~~~-~~~~~~~~~~~~~~~~l~~~~g 481 (483)
++.|+.+ ....++..++|.+.+.+.|..|
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999997 5678899999999999998865
No 69
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=1.1e-12 Score=130.15 Aligned_cols=273 Identities=13% Similarity=-0.006 Sum_probs=149.3
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC------------------------------
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------------------ 210 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------ 210 (483)
++|.+. +++|.+..+.. ....+++.++..++..++.++.|+++||+||
T Consensus 36 ~l~~~~-~~~g~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (408)
T PRK09874 36 FLPLYV-EQLGVTGHSAL-NMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLIL 113 (408)
T ss_pred hHHHHH-HHhCCccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 334443 45666644321 1233678888999999999999999999999
Q ss_pred ---------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh------
Q psy3807 211 ---------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY------ 257 (483)
Q Consensus 211 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~------ 257 (483)
+...+..+....+|..+++.++.... +..+||..+.+.++..++.
T Consensus 114 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 114 RALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA--DSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566666665543221 3457887777664432221
Q ss_pred ccCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHH
Q psy3807 258 NTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYST 337 (483)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
..+++.++. .+++..+ . .+..+.+++++.+.......+.. +. .......+.+
T Consensus 192 ~~~~~~~~~------------~~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 243 (408)
T PRK09874 192 CIRENFQPV------------SKKEMLH-------M-----REVVTSLKNPKLVLSLFVTTLII---QV-ATGSIAPILT 243 (408)
T ss_pred HhccCcccc------------cchhhhH-------H-----HHHHHhCcCCchHHHHHHHHHHH---HH-HHHHHHHHHH
Confidence 111110000 0000000 0 01123345554433232222211 11 1122223334
Q ss_pred HHHhhcCCCCcc----hhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 338 ALFESSGLSEKT----AKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 338 ~~~~~~g~s~~~----~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
.+..+.+.+..+ .+......+++.+++.+..+++.||+|||+.+..+..+..++.+..... .
T Consensus 244 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~----------- 309 (408)
T PRK09874 244 LYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV---Q----------- 309 (408)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh---c-----------
Confidence 444443322222 2233444567778888889999999999999887766655544433221 0
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+...+...+...+.+. ..+.......+..|.+.|++..++.+....++..++|.+.+.+.+..|
T Consensus 310 -~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 310 -TPLQLGILRFLLGAADGA-LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred -cHHHHHHHHHHHHhhhHh-hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 112222222222222222 223334455677899999999999999999999999999999887654
No 70
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.53 E-value=1.4e-12 Score=128.78 Aligned_cols=268 Identities=14% Similarity=0.018 Sum_probs=160.7
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
.+++.+++++.|.+.... |++.+...+...+..++.|+++||+||
T Consensus 31 ~~~~~~~~~~~g~s~~~~------gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (400)
T PRK11646 31 PLISIRFVDQLGWAAVMV------GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWL 104 (400)
T ss_pred HHHHHHHHHHhCCcHHHH------HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 566777777777765444 788888888888889999999999999
Q ss_pred -----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---c
Q psy3807 211 -----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---N 258 (483)
Q Consensus 211 -----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---~ 258 (483)
++..+.......+|..+++.++.... ..+||..|++.++..++. .
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~---~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL---QYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHH
Confidence 56666777777778777777654332 358999888775433221 1
Q ss_pred cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHH
Q psy3807 259 TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTA 338 (483)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
....+++ ++++.+ ++.+.++++++++|+++........ .. ........+.|.
T Consensus 182 ~~~~~~~---------~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~p~ 233 (400)
T PRK11646 182 AWLLPAY---------KLSTVR--------------TPVREGMTRVLRDKRFVTYVLTLTG-YY----MLAVQVMLMLPI 233 (400)
T ss_pred HHhCCcc---------cccccc--------------hhhHHHHHHHHcCchHHHHHHHHHH-HH----HHHHHHHHhhhh
Confidence 0000000 000000 0001134566766654432221111 11 111223456677
Q ss_pred HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHh-hccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH
Q psy3807 339 LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLM-DRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY 417 (483)
Q Consensus 339 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~-dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (483)
++++.+.++.+.+......++....+....++.. ||++.|+.+..+..+.+++.+.+.... ..+
T Consensus 234 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------------~~~ 298 (400)
T PRK11646 234 MVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------------NLQ 298 (400)
T ss_pred hHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------------hHH
Confidence 7777666666666666666666665555555555 456666666666666555544443211 011
Q ss_pred HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 418 LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
.......++..+.. ...|...++..|..|++.|+++.|+.+....++..++|.+.+.+.|..
T Consensus 299 ~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 299 QLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 12222222222222 222444577789999999999999999999999999999999998875
No 71
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.52 E-value=8.9e-14 Score=141.20 Aligned_cols=157 Identities=14% Similarity=0.176 Sum_probs=90.0
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccc------cCCCCCcchhhccccccccccccccccccchhHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPI------LGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAV 75 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~------~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~ 75 (483)
|++|++|+++||++.++.+.+..+|.+++..+..... ....+|||++|. ++.+.++
T Consensus 142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~------------------i~~~~~l 203 (490)
T PRK10642 142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFF------------------IALPLGI 203 (490)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHH------------------HHHHHHH
Confidence 6899999999999999999999999888875543211 123689999665 3333333
Q ss_pred HHHHhhccCCCCCcccHHH--HHh----hhccCCCchhH-----HHHHHHHHHhhhhhhccccccccCchhhhhhhcccc
Q psy3807 76 FWLFTYKKVPETKNKTFEE--IVA----LFRTDDGLTFH-----LTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQF 144 (483)
Q Consensus 76 ~~~~~~~~~~e~~~~~~~~--~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 144 (483)
..++.++..||+++.+.++ .++ ..+++++.... ............+....
T Consensus 204 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 264 (490)
T PRK10642 204 IGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNV------------------- 264 (490)
T ss_pred HHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHH-------------------
Confidence 3344455577775422111 000 00001111110 00111101000010000
Q ss_pred ccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 145 GYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
....+..|+|+++++.+|.+.... ++..+...++..++.+++|+++||+||
T Consensus 265 ---------~~~~~~~~~p~~l~~~~g~s~~~~------~~~~~~~~~~~~~~~~~~g~l~dr~gr 315 (490)
T PRK10642 265 ---------TYYMLLTYMPSYLSHNLHYSEDHG------VLIIIAIMIGMLFVQPVMGLLSDRFGR 315 (490)
T ss_pred ---------HHHHHHHHHHHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111234678888877777765443 466677788899999999999999999
No 72
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.52 E-value=4.1e-13 Score=134.57 Aligned_cols=160 Identities=12% Similarity=0.045 Sum_probs=98.0
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
+++++++|.++...+..++.+. +......+.+++.+. .+ +............++.+++.++.++++||+|||+
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNL-----AFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHH-----HHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 4556666655443222222221 223333334444443 23 3334455566668889999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-------CCchh
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-------QGPRP 452 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~R~ 452 (483)
.+..+..+.+++.+.+.... . ..+...+...+...+.+. ..+..+++.+|..| .+.+|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 289 LFAGGILLMVLGYLIFFFAG--S------------NLPLILVLIILAGFGQNF-VTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcc--h------------hHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhcCccchH
Confidence 99888777766655443311 0 111222222222222222 23445666777654 56789
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 453 AAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+..|+.+....++..+++.+.+.+++..|
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999988765
No 73
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.51 E-value=5.4e-13 Score=130.35 Aligned_cols=147 Identities=13% Similarity=0.153 Sum_probs=89.4
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
.++.+++++.+...+. ..... ........+.|.+++ ..|.+..+.+.......+..+++.++.+++.||+|||+
T Consensus 218 ~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 218 QLKVFRDRHTWILALL-YSVTF----GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR 292 (366)
T ss_pred HHHHHhccchhhHHHH-HHHHH----HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch
Confidence 4556766655432222 11111 123344555666665 46888888888888888999999999999999999988
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHH
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAV 459 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~ 459 (483)
.+..+....+.+...+..... .+...+.............+.+.+ ..+..++|+.| +.|++++|+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~ 359 (366)
T TIGR00886 293 KLLMSFLGVAMGAFLVVLGLV-----------SPLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVG 359 (366)
T ss_pred hHHHHHHHHHHHHHHHHhcCC-----------CcchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHH
Confidence 877666555554443332110 000111222223333334444333 35577788887 68999999999
Q ss_pred HHHHHH
Q psy3807 460 LVNWIA 465 (483)
Q Consensus 460 ~~~~~~ 465 (483)
.+++++
T Consensus 360 ~~~~~g 365 (366)
T TIGR00886 360 AIGNLG 365 (366)
T ss_pred HhccCC
Confidence 887764
No 74
>KOG0254|consensus
Probab=99.51 E-value=6.8e-14 Score=142.68 Aligned_cols=182 Identities=23% Similarity=0.284 Sum_probs=126.1
Q ss_pred CccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhh------------------ccccccccccccc
Q psy3807 1 MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLL------------------DSRESDLHRSELE 62 (483)
Q Consensus 1 ~yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~------------------~sp~~l~~~~~~~ 62 (483)
+|++|++|++.||.+++..|+.+.+|.++++++++..... .++||+++ ||||||+++||.+
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChH
Confidence 5899999999999999999999999999999998765432 27999887 9999999999999
Q ss_pred cccccchhHHHHHHHHHhhccC-CCCCcccHHHHHhh-h----ccCC---------CchhHHHHHHHHHHhhhhhhcccc
Q psy3807 63 NYTFLPFSVMLAVFWLFTYKKV-PETKNKTFEEIVAL-F----RTDD---------GLTFHLTYTILSAMLGMFQFGYNT 127 (483)
Q Consensus 63 ~~~f~~~~~~~a~~~~~~~~~~-~e~~~~~~~~~~~~-~----~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~ 127 (483)
+ +...+.+.+.. +++.+.+.++.... . ..+. +..+++..............|++.
T Consensus 244 ~----------a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~ 313 (513)
T KOG0254|consen 244 E----------AKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINY 313 (513)
T ss_pred H----------HHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCce
Confidence 9 99999888874 33333443333211 0 0011 111222222222333333479999
Q ss_pred ccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy3807 128 GVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADK 207 (483)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr 207 (483)
..+|.+.++...|. +.+. .+...+..+...+++.++.++.||
T Consensus 314 ~~~Y~~~if~~~g~-------------------------------~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~ 355 (513)
T KOG0254|consen 314 VFYYSTTIFKSAGL-------------------------------KSDT-------FLASIILGVVNFLGTLVATYLVDR 355 (513)
T ss_pred EEeehHHHHHhcCC-------------------------------CCch-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777665544 1111 133344455566788888999999
Q ss_pred cCCchHhhHHHHHHHHHHHHHHHH
Q psy3807 208 FGRGGLGTVNQLAVTLGLLISQIL 231 (483)
Q Consensus 208 ~GR~~~~~~~~~~~~~g~~~~~~~ 231 (483)
+||+.+......++.++..+....
T Consensus 356 ~gRr~lll~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 356 FGRRKLLLFGAAGMSICLVILAVV 379 (513)
T ss_pred hccHHHHHHhHHHHHHHHHHHHHH
Confidence 999999988888888887766654
No 75
>KOG2532|consensus
Probab=99.51 E-value=6.5e-13 Score=131.47 Aligned_cols=263 Identities=17% Similarity=0.222 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
+++.+.++.|++++++.+|+++||+|-
T Consensus 76 ~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~ 155 (466)
T KOG2532|consen 76 GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAK 155 (466)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeee
Confidence 899999999999999999999999996
Q ss_pred -------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc------cCCChHHHHHHHHHHhCCc
Q psy3807 211 -------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN------TGVINAPEKVTLRKLRAST 277 (483)
Q Consensus 211 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~------~~~~~~~~~~~l~~~~~~~ 277 (483)
++..++...+..+|.+++..++...- ....||+.+|++.++..+++. ..+++++.+ .
T Consensus 156 W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc-~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~---------~ 225 (466)
T KOG2532|consen 156 WAPPNERSTFIAILTAGSQLGTIITMPVSGLLC-ESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP---------N 225 (466)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-ccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC---------C
Confidence 44444444555555555554332211 134899999999866655432 222222210 0
Q ss_pred chHHHHHHHHHHHHHhhcc--cccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHH
Q psy3807 278 QIEVDIEEMRVEQIAQQSE--SKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTT 354 (483)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~ 354 (483)
-.++|.+.+++.+.+++.+ .+.+++++++++..+- ..+..++ ...+...+..|.|.++++ +|++..+.++..
T Consensus 226 is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwa----i~~~~f~-~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~s 300 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWA----IWISAFG-GNWGFYLLLTYLPTYLKEVLGFDVRETGFLS 300 (466)
T ss_pred CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHH----HHHHHHH-HHHHHHHHHHHhhHHHHHHhCCChhhhhHHH
Confidence 1233444444443322222 4678999998875432 2333333 333567778888888875 799999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhccCCh---------HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 355 IGIGAVMVTMTIISIPLMDRMGRR---------TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 355 ~~~~~~~~~g~~~~~~l~dr~grr---------~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
.+..+...+..++++.++||+-+| ..-.++..+.+++++.+++.. +...+..++++.+
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~-------------~~~~~~a~~~l~~ 367 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS-------------DEHRLLAVILLTI 367 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC-------------CCcchHHHHHHHH
Confidence 999999999999999999998552 222334444444444443321 0011233333333
Q ss_pred HHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 426 FVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
.....+..... .+..-.. .++.-+..+|+.+.+..+..+++|.+.+.+.
T Consensus 368 ~~~~~g~~~~G---f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 368 AIGLSGFNISG---FYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred HHHHcccchhh---hHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEe
Confidence 33333332222 1122222 5577799999999999999999999988876
No 76
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.50 E-value=1.2e-12 Score=127.48 Aligned_cols=157 Identities=9% Similarity=-0.053 Sum_probs=90.9
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHH-HHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIG-AVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~~~l~dr~grr 378 (483)
.++++++++..++ .....+..++.+. .......+.|.++++.|++..+.+......+ +..+++.++++++.||+|||
T Consensus 198 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 275 (356)
T TIGR00901 198 PIREFFQRKNMIQ-ALLLLLLIVLYKL-GDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL 275 (356)
T ss_pred HHHHHHHhcCchH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 3556666655332 2222222233332 2344445566666668888877776666555 56789999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
+.+..+..+..+....+.......+ + ++......+......++...+.+. ..+...++.+|.+|++.|++..|+.
T Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~ 350 (356)
T TIGR00901 276 YALLLFGIVQALTNAGFVWLASNGH---H-DGITFPHLLMLFLTITLEAVTGGL-GTVAFVAFLSKLSNPKFGATQMALL 350 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---c-cccccchHHHHHHHHHHHHHHhHH-HHHHHHHHHHHhcCCCccHHHHHHH
Confidence 9988777766665444333211000 0 000000112222222222222222 3344568889999999999999998
Q ss_pred HHHHH
Q psy3807 459 VLVNW 463 (483)
Q Consensus 459 ~~~~~ 463 (483)
++..+
T Consensus 351 ~~~~~ 355 (356)
T TIGR00901 351 SSLSA 355 (356)
T ss_pred HHHHh
Confidence 87654
No 77
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.50 E-value=1.9e-12 Score=128.06 Aligned_cols=156 Identities=10% Similarity=0.014 Sum_probs=94.7
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESS--GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
.++++|+|+++... +..++.... ......|.+.+.++. +.+...+............+|.++++++.||+++|
T Consensus 225 ~~~~~~~~~~~~~~-l~~f~yvg~----e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~ 299 (410)
T TIGR00885 225 LSRLARIRHYREGV-IAQFFYVGV----QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH 299 (410)
T ss_pred HHHHHhChhHHHHH-HHHHHHHHH----HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 34567666654422 222222222 223334455555543 33333333344444577889999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
+.+.+...+.+++.++.... + + ......+.+...+.+..+ |..+....+..+++.+..+.++.
T Consensus 300 ~~l~i~~~~~~~~~ll~~~~---~----------~---~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~ 362 (410)
T TIGR00885 300 KVLMAYAIIGMALCLGSIFA---G----------G---HVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLV 362 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHc---C----------C---hHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHH
Confidence 98877776666665554431 1 1 112233333333444333 66778888888888776667766
Q ss_pred HHHHHHHHHHHHHHhHHhhhhc
Q psy3807 459 VLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
.+. +++.+.|.+.+.+.|..
T Consensus 363 ~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 363 MAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHH--hccchHHHHHHHHHHHh
Confidence 665 99999999999999954
No 78
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.49 E-value=4.8e-12 Score=128.17 Aligned_cols=235 Identities=9% Similarity=-0.002 Sum_probs=131.6
Q ss_pred chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---cCCChHHHHHHHHHHhCCcchHHHHHHHH
Q psy3807 211 GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---TGVINAPEKVTLRKLRASTQIEVDIEEMR 287 (483)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 287 (483)
+...++...+..+|.++++.+..... ....+||..|++.++..++.. ...+ |+.++ .++ +++. +
T Consensus 142 g~~~~i~~~g~~lG~llg~~l~~~l~-~~~~GWr~~f~i~a~l~ll~~l~~~~~~-e~~~~------~~~--~~~~---~ 208 (491)
T PRK11010 142 GAGAAISVLGYRLAMLVSGGLALWLA-DRYLGWQGMYWLMAALLIPCIIATLLAP-EPTDT------IPV--PKTL---E 208 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcccCHHHHHHHHHHHHHHHHHHHHhcC-CCccc------ccc--ccch---h
Confidence 55566666667777777765543322 113589999988754433321 0100 00000 000 0000 0
Q ss_pred HHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHH-HHHHHHHHHHH
Q psy3807 288 VEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTI-GIGAVMVTMTI 366 (483)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~g~~ 366 (483)
+....++++.+++++.+......+ ..+........+..|++.++.|++..+.+.... ...++.+++.+
T Consensus 209 -------~~~~~~l~~~~~~~~~~~~ll~~~----l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~l 277 (491)
T PRK11010 209 -------QAVVAPLRDFFGRNNAWLILLLIV----LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGAL 277 (491)
T ss_pred -------hhHHHHHHHHHcCcCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000123556776554433222221 222222223334455555678999888888764 55578999999
Q ss_pred hHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc
Q psy3807 367 ISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF 446 (483)
Q Consensus 367 ~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 446 (483)
++++++||+|||+.+.++..+..++.+.+....... + ..+......++...+.+++... .+++..+..
T Consensus 278 l~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~----------~-~~~~l~~~~~l~~~~~g~~~~~-~~a~~~~l~ 345 (491)
T PRK11010 278 YGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD----------K-NLYSMGAAVFFENLCGGMGTAA-FVALLMTLC 345 (491)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc----------c-cHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHc
Confidence 999999999998887766555554443332211100 0 1111121222222222222222 357778899
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 447 SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 447 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
|.+.+++..++.++...++..+.+.+.+.+.|..|
T Consensus 346 ~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G 380 (491)
T PRK11010 346 NKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG 380 (491)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999988889999988765
No 79
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.48 E-value=3.7e-12 Score=125.82 Aligned_cols=263 Identities=14% Similarity=0.043 Sum_probs=145.0
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.+++|.+.++. +++.++..++..++.++.|+++||+||
T Consensus 32 ~~i~~~~~~s~~~~------~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 105 (394)
T PRK11652 32 ADMARDLNVREGAV------QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAI 105 (394)
T ss_pred HHHHHHhCCCHHHH------HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34556667766555 788999999999999999999999999
Q ss_pred -------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---c---c
Q psy3807 211 -------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---N---T 259 (483)
Q Consensus 211 -------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---~---~ 259 (483)
+...+..+.+..++..+++.++.... +..+||..+.+.++...+. . .
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~--~~~g~~~~f~~~~~~~~~~~~~~~~~~ 183 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT--TLFGWRACYLFLLLLGAGVTFSMARWM 183 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccChHHHHHHHHHHHHHHHHHHHHhC
Confidence 22233444455555555555443221 3467998888764433221 1 1
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
++++++ ++.+. + .+..+++++|+|+++........ . +.+......+.+.+
T Consensus 184 ~~~~~~-----------~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~ 233 (394)
T PRK11652 184 PETRPA-----------DARRT---R-----------VLASYRTLLSNRRFNCYLLMLIG-T----LAGIAVFEACSGVL 233 (394)
T ss_pred CccCcc-----------ccchh---H-----------HHHHHHHHHcChHHHHHHHHHHH-H----HHHHHHHHHhChHH
Confidence 110000 00000 0 11134556666655432222111 1 11233334444555
Q ss_pred Hhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHH
Q psy3807 340 FES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYL 418 (483)
Q Consensus 340 ~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (483)
+++ .|.+..+.+.......++.+++..+.+++.||.+|+... +...+.++.+.+....... ....+.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~ 301 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFG----------VMNVWT 301 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc----------cccHHH
Confidence 555 788877777777777777888888888888888743322 2222222222211111000 001122
Q ss_pred HHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 419 SVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
......+...+.+. ..+....+..|.+| +.++++.++.+....++..+++.+.+.+.+
T Consensus 302 ~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 302 LLVPAALFFFGAGM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 22222222233332 23444556678877 578999999999999999999988766543
No 80
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.46 E-value=1.1e-11 Score=122.20 Aligned_cols=167 Identities=8% Similarity=-0.049 Sum_probs=98.7
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~grr 378 (483)
+.++++|+|..+......++... +......+.+.++++.|+++++.+......++ ..+++.++.+++.||+|+|
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAM-----TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHH-----HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 35677877765443333222221 12233334555666789999888887776654 5667789999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCC-CchhHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQ-GPRPAAMSI 457 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~R~~~~g~ 457 (483)
+.+..+..+..+..+.... .... .... ..........+.....+..... ......+..++ +.+++..++
T Consensus 275 ~~l~~~~~~~~~~~~~~~~-~~~~-------~~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g~~~~~ 344 (390)
T TIGR02718 275 RTFILGVGLAGSLALLWFA-QAAF-------WLAP-GIAVAWSCSAFGSLITGITSVA-IYTAFMRFAGDGDQAGTDVTA 344 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHc-------ccCC-cHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcccchHHHHHH
Confidence 9988776555332222211 1100 0000 0111111111111222222222 23343455554 899999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 458 AVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.++...++..+++.+.+.+.|..|
T Consensus 345 ~~~~~~lg~~~g~~~~G~l~~~~G 368 (390)
T TIGR02718 345 VQSTRDLGELIASSIAGYLTDRFG 368 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999998765
No 81
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.46 E-value=2.8e-12 Score=120.72 Aligned_cols=167 Identities=18% Similarity=0.155 Sum_probs=121.8
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
.++.++++++.|... + ..+..+.++..+..+.|.+++ +.|+++.+++.........+.+...++|+++||+|.+
T Consensus 210 ~~~~v~~~~~~W~ls----l-lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 210 QLKAVFSNKDTWLLS----L-LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR 284 (417)
T ss_pred HHHHHhcCcchHHHH----H-HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch
Confidence 455667666655422 1 233344566777778887775 5799999998888889999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
+.+......++++..+........ .........+........+.+.|-++ .+.+++.++|.+ -+...|+.
T Consensus 285 rv~~~~f~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~l~l~~~~G~GnGs-vfk~Ip~if~~~-~G~v~G~v 354 (417)
T COG2223 285 RVTLAVFVGMALAAALLSLFLTGF--------GHGGSFVVFVAVFLALFVFAGLGNGS-VFKMIPVIFPKE-TGAVTGIV 354 (417)
T ss_pred hHHHHHHHHHHHHHHHHHcccccc--------ccCcchHHHHHHHHHHHHHhccCcch-heeechHHHHhh-hhHHHHHH
Confidence 999888888888877766532111 00122333444445555566666665 457778888864 58999999
Q ss_pred HHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 459 VLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...+.+++++-|..++...+..|
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred HHhccccccchhHHHHHHHHhcc
Confidence 99999999999999999998876
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.43 E-value=3.4e-12 Score=143.42 Aligned_cols=156 Identities=8% Similarity=-0.071 Sum_probs=99.3
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCc-chhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEK-TAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
++.+++++.++..++...+.+.. ......++.+++.+..|.+.. ..++.....+++.+++.++.+++.||+++|+
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~ 300 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFI----SQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG 300 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHH----HHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc
Confidence 45566665544433222222221 222233333444456788887 7888888889999999999999999999998
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHH
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAV 459 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~ 459 (483)
.+.++.++++++.+.+.... ..+..++..+++..+.+.. .+...++..|..|++.|+++.|+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~rg~~~~~~~ 364 (1146)
T PRK08633 301 LVPLGALGLALSLFLLPTAP---------------SLASVLVLFFLFGFSAGLF-IVPLNALIQFRAPEKELGKVLAANN 364 (1146)
T ss_pred chhHHHHHHHHHHHHHHHhh---------------hHHHHHHHHHHHHHHHHHh-hHHHHHHHhhcCCccchhhhhHHHH
Confidence 88877776666655544321 1122222223333333322 2334577789999999999999999
Q ss_pred HHHHHHHHHHHHHhHHh
Q psy3807 460 LVNWIANFVVGLGFPTL 476 (483)
Q Consensus 460 ~~~~~~~~~~~~~~~~l 476 (483)
++..++.++++.+...+
T Consensus 365 ~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 365 FLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999887776665444
No 83
>KOG1330|consensus
Probab=99.41 E-value=6.3e-13 Score=126.04 Aligned_cols=285 Identities=10% Similarity=-0.015 Sum_probs=158.6
Q ss_pred HHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------
Q psy3807 163 KDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------- 210 (483)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------- 210 (483)
.+..++.++.+.++. |+++..+.+...+.++++|+++||+.|
T Consensus 56 ~~~v~~~fni~~s~~------Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~ 129 (493)
T KOG1330|consen 56 LKEVQTYFNISDSEL------GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRG 129 (493)
T ss_pred hHHHHHhcCCCchhc------cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667778887776 899999999999999999999999999
Q ss_pred --------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHh---c--c
Q psy3807 211 --------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGY---N--T 259 (483)
Q Consensus 211 --------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~---~--~ 259 (483)
++..++++++..+|..++++.+..... ....||+.|...++..++. . .
T Consensus 130 ~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~-~~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 130 FVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS-LTFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred HhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc-CccceEEEEEeehHHHHHHHHHHHhh
Confidence 777888888888888888877643222 2234999887764443321 1 1
Q ss_pred CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHH
Q psy3807 260 GVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTAL 339 (483)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
...+++ +..++..+++.. ..+.....++.+.+.|++.+.-..+-....++. ...+.++.|.+
T Consensus 209 ~~eP~r--ga~~~~~~~~~~-----------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv-----~Gs~sww~p~~ 270 (493)
T KOG1330|consen 209 VREPER--GARDEVDGENKM-----------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFV-----IGSLSWWAPAF 270 (493)
T ss_pred ccCccc--ccccccccCCcC-----------CCCccchHHHHHHHHccCceeeehHHHHHHHHh-----ccccchhhhhH
Confidence 111111 111111110000 000011111233344545544333322222221 23334444444
Q ss_pred H----hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc----CChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 340 F----ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM----GRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 340 ~----~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~----grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
. +-.|.+.++..+...+...++.+|.++++.++||+ .|-....+..+..+.+......+..... ..
T Consensus 271 ~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~------~~ 344 (493)
T KOG1330|consen 271 IYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFP------AF 344 (493)
T ss_pred HHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHH------hh
Confidence 3 44577888888888899999999999999999994 2212222222222222211111111110 00
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHH-HHHHHHhHHhhhh
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIAN-FVVGLGFPTLNLP 479 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~-~~~~~~~~~l~~~ 479 (483)
.....+..++++++.......++.+.. -+..|+.|++.|.++.++...+..+.+ +-+|++.+.+.|.
T Consensus 345 ~~~s~~~~~il~~~g~~~~~~~~a~n~-~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 345 TSSSMIFGLILFLVGETISWFNWATNN-PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhccccccc-ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 111222333333333333444455544 445699999999999999987776644 3444466665554
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.40 E-value=8e-11 Score=116.60 Aligned_cols=163 Identities=12% Similarity=0.042 Sum_probs=89.6
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHH-HHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIG-AVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~~~l~dr~grr 378 (483)
++++++|+|.++...+...+.... ......+..+++.++.|.++.+.+......+ +..+++.++++++.||+|||
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~----~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLG----DAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhH----HHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 456778777665533333332221 1111223445566668888877777665544 45899999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhc---cccccccceeeccccCCCchhHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFA---VGPGSIPWMITAELFSQGPRPAAM 455 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~ 455 (483)
+.+..+..+..+..+.+....... + ..+.......+.....+ ....+....++.+.+|.+ ..
T Consensus 277 ~~l~~~~~~~~l~~l~~~~~~~~~----------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~ 341 (402)
T PRK11902 277 RSLMLFGVLQAVSNLGYWVLAVTP----------K-HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT----QY 341 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----------C-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----HH
Confidence 888766666555443332221111 0 11222222211111111 112233445666666644 44
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 456 SIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 456 g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+..+++..++...++.+.+.+.|.+|
T Consensus 342 ~~~~~~~~l~~~~~~~~~G~l~~~~G 367 (402)
T PRK11902 342 ALLSALASVGRVYVGPTSGYLVEAYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55555566666656667888888766
No 85
>KOG2533|consensus
Probab=99.37 E-value=1e-11 Score=123.35 Aligned_cols=193 Identities=18% Similarity=0.209 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------------------------------
Q psy3807 183 YSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------------------------------- 210 (483)
Q Consensus 183 ~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------------------------------- 210 (483)
.+.+.++++++++++.++++.+.||++-
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~w 162 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNW 162 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhh
Confidence 3899999999999999999999999984
Q ss_pred ------chHhhHHHHHHHHHHHHHHHHccccc----cCCCCchhHHHHHHHHHHHHhc------cCCChHHHHHHHHHHh
Q psy3807 211 ------GGLGTVNQLAVTLGLLISQILGIEPI----LGTDEGWPVLLAMLGMFQFGYN------TGVINAPEKVTLRKLR 274 (483)
Q Consensus 211 ------~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~w~~~~~~~~i~~~~~~------~~~~~~~~~~~l~~~~ 274 (483)
+..+++...+..+|.+++.++++... .....+||+.|++.+++.+..- ..+.++++ +..
T Consensus 163 y~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~-----~fl 237 (495)
T KOG2533|consen 163 YGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA-----WFL 237 (495)
T ss_pred cChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhc-----ccc
Confidence 66677777777777777776654311 1245789999999976655421 33333332 111
Q ss_pred CCcchHHHHHHHHHHHHHh--hcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchh
Q psy3807 275 ASTQIEVDIEEMRVEQIAQ--QSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAK 351 (483)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~ 351 (483)
++++.+-..++.+++.... ++.++..+++.++++..+...+. .++... ..+.+.+|.|.++++ .|++..++.
T Consensus 238 ~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~----~~~~~l-v~~~~~~~lpl~l~~~~~~s~~~a~ 312 (495)
T KOG2533|consen 238 TDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLC----YFFLKL-VNYGFSYWLPLYLKSNGGYSELQAN 312 (495)
T ss_pred chHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHH----HHHHhh-ccccHHHHHHHHHHcCCCcChHHhc
Confidence 1111110111111111111 11344567788888865543333 333332 236677889999988 568999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhc----cCChHHHHhhh
Q psy3807 352 FTTIGIGAVMVTMTIISIPLMDR----MGRRTLHLYGL 385 (483)
Q Consensus 352 ~~~~~~~~~~~~g~~~~~~l~dr----~grr~~l~~~~ 385 (483)
..+++..++++++.+++++++|| ..+|.......
T Consensus 313 ~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 313 LLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred cccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999 45555554443
No 86
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.37 E-value=1.2e-10 Score=114.91 Aligned_cols=251 Identities=9% Similarity=-0.046 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------------------------
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------------------------- 210 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------------------------- 210 (483)
+++.+.+.++..+..+++|+++||+||
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~ 120 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHPLLAYGLVGIGAAAYSPAKYGILTELLPGE 120 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 799999999999999999999999999
Q ss_pred --chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHH---Hh--ccCCChHHHHHHHHHHhCCcchHHHH
Q psy3807 211 --GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQF---GY--NTGVINAPEKVTLRKLRASTQIEVDI 283 (483)
Q Consensus 211 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~---~~--~~~~~~~~~~~~l~~~~~~~~~~~~~ 283 (483)
++..+..+.....+..+++.++..... ..|+..+.+.+...+ +. ..++.+++.+ +.+.+.....
T Consensus 121 ~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~---~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~ 191 (393)
T PRK11195 121 KLVKANGWMEGSTIAAILLGTVLGGALAD---PHAEAALAVCALIYLLAALFNLFIPRLGARRP------GQSWNPIALL 191 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCccccc------ccCCCHHHHH
Confidence 445555555556666666655433221 236665555432211 11 1111110000 0000000001
Q ss_pred HHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHH
Q psy3807 284 EEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMV 362 (483)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~ 362 (483)
++.+ ...+.++++|..+..+....+.+.. .....+..|.+++ ..|.++.+.+......+++.+
T Consensus 192 ~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i 255 (393)
T PRK11195 192 RDFF-----------HACRVLWRDKLGRFSLAGTTLFWGA-----GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIA 255 (393)
T ss_pred HHHH-----------HHHHHHHhCchhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Confidence 1110 0134567666655433332222221 1233333444444 468888899999999999999
Q ss_pred HHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceee
Q psy3807 363 TMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMIT 442 (483)
Q Consensus 363 ~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (483)
+++++.+++.||.++|+.+..+.. .++....+.. .. ..+.......+...+.+....+ ..+..
T Consensus 256 ~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~---~~------------~~~~~~~~~~~~G~~~g~~~~~-~~~~~ 318 (393)
T PRK11195 256 VGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL---QH------------SLLPAYPLLILIGALGGFFVVP-MNALL 318 (393)
T ss_pred HHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH---Hh------------HHHHHHHHHHHHHHhhhhhhhh-HHHHH
Confidence 999999999999998887766642 2222222211 00 1122222222333333332233 33445
Q ss_pred ccccCCCc-hhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 443 AELFSQGP-RPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 443 ~e~~p~~~-R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
.|..|++. +|++.++.+...+++..++..++..+
T Consensus 319 q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 319 QHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred HhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 67766665 79999999999999999988887744
No 87
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.36 E-value=4.9e-11 Score=119.14 Aligned_cols=164 Identities=13% Similarity=0.073 Sum_probs=109.7
Q ss_pred ccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC
Q psy3807 298 KISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG 376 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g 376 (483)
+...++++|+|++++......+.++. ........+++.+. .|.+ ...........+..+++.++.++++||+|
T Consensus 215 ~~~~~~~~~nr~~~~l~~~~~~~~~~-----~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~g 288 (428)
T PF13347_consen 215 RDSLRSLFRNRPFRILLLAFFLQWLA-----FALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFG 288 (428)
T ss_pred ccchhhhcccchHHHHHHHHHHHHhh-----hhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33567778787766544333333222 23333334444444 3433 35556667778899999999999999999
Q ss_pred ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-------CC
Q psy3807 377 RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-------QG 449 (483)
Q Consensus 377 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~ 449 (483)
+|+.+..+..+.+++.+.+.+... ...+...+...+...+.+. ...+++++.+|+.+ .+
T Consensus 289 k~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~l~gi~~~~-~~~~~~a~~ad~id~~e~~tg~r 354 (428)
T PF13347_consen 289 KKKVYIIGLLLAALGFLLLFFLGP-------------GSPWLVLILFILAGIGYGA-FFVIPWAMLADVIDYDEWKTGRR 354 (428)
T ss_pred ceeehhhhHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHhHhhhcc-cccccccccccchhhHHHhcCCC
Confidence 999999998888888776655421 1122333333333333333 34667888888876 34
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 450 PRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 450 ~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..|...|+.++...++..+++.+.+.+++..|
T Consensus 355 ~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 355 REGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred chHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 56888999999999999999999999887765
No 88
>KOG2532|consensus
Probab=99.35 E-value=8.7e-12 Score=123.50 Aligned_cols=206 Identities=14% Similarity=0.207 Sum_probs=146.4
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhhccccccccccccccccccchhHHHHHHHHHhh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTY 81 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~~ 81 (483)
..++|+|+++|+++.++...+..+|.+++..++-.+ -..+.|||.+|. .++..++++...|++..
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~l-c~s~~GW~sifY--------------~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLL-CESSLGWPSIFY--------------VFGIVGLIWFILWFLFY 216 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-hccCCCCchHHH--------------HHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999987554321 123589999998 88889999999999999
Q ss_pred ccCCCCCcc----cHHHHHhhhccCC-----CchhHHHH---HHHHHHhhhhhhccccccccCchhhhhhhccccccccc
Q psy3807 82 KKVPETKNK----TFEEIVALFRTDD-----GLTFHLTY---TILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTG 149 (483)
Q Consensus 82 ~~~~e~~~~----~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (483)
++.|++++. |.+.+++...++. +..++... .+.++.+..+...+
T Consensus 217 ~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~------------------------ 272 (466)
T KOG2532|consen 217 SDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNW------------------------ 272 (466)
T ss_pred cCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHH------------------------
Confidence 988887543 4444443322211 12233222 22233333332222
Q ss_pred eecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-------------------
Q psy3807 150 VINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR------------------- 210 (483)
Q Consensus 150 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR------------------- 210 (483)
....+.+|.|.++.+.+|.+..+. |+++++..+.+.+..+++|.++||.-+
T Consensus 273 ----~~~~l~~y~PtY~~~VL~f~v~~~------G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~ 342 (466)
T KOG2532|consen 273 ----GFYLLLTYLPTYLKEVLGFDVRET------GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGG 342 (466)
T ss_pred ----HHHHHHHHhhHHHHHHhCCChhhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHH
Confidence 223567899999999999999888 899999999999999999999998643
Q ss_pred -------------------------------------------------chHhhHHHHHHHHHHHHHHHHccccc-cCCC
Q psy3807 211 -------------------------------------------------GGLGTVNQLAVTLGLLISQILGIEPI-LGTD 240 (483)
Q Consensus 211 -------------------------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 240 (483)
+.++++.+....+...++|.+..... ..+.
T Consensus 343 ~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~ 422 (466)
T KOG2532|consen 343 PAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTR 422 (466)
T ss_pred HHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCH
Confidence 56667777777788878877643333 2234
Q ss_pred CchhHHHHHHHHHHHH
Q psy3807 241 EGWPVLLAMLGMFQFG 256 (483)
Q Consensus 241 ~~w~~~~~~~~i~~~~ 256 (483)
..||.+|.+.++..++
T Consensus 423 ~eW~~VF~i~a~i~~~ 438 (466)
T KOG2532|consen 423 EEWRIVFLIAAGILIV 438 (466)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5799999888655443
No 89
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.35 E-value=8.5e-11 Score=116.67 Aligned_cols=269 Identities=12% Similarity=0.082 Sum_probs=144.7
Q ss_pred hhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------------
Q psy3807 166 YKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------------- 210 (483)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------------- 210 (483)
+.++++.+.+.. ++..+++.++..+++++.|+++||+||
T Consensus 42 i~~~~~~~~~~~------~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 115 (413)
T PRK15403 42 VVRDFNADVSLA------PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG 115 (413)
T ss_pred HHHHhCCCHHHH------HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455666655554 688899999999999999999999999
Q ss_pred -----------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---cCCChH
Q psy3807 211 -----------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---TGVINA 264 (483)
Q Consensus 211 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---~~~~~~ 264 (483)
++..+..+....++..+++.++.... +..+||+.|++.++..++.. ....++
T Consensus 116 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~--~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 116 TSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM--HFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33445555556667777776654322 34689999988754433211 100000
Q ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-c
Q psy3807 265 PEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-S 343 (483)
Q Consensus 265 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 343 (483)
..+ +++++. +. +....++++++|+|+++...+...+ . .........+.|.++++ .
T Consensus 194 ~~~------~~~~~~--~~-----------~~~~~~~~~ll~~~~~~~~~l~~~~----~-~~~~~~~~~~~P~~l~~~~ 249 (413)
T PRK15403 194 TVK------RGAVPF--SA-----------KSVLRDFRNVFRNRLFLTGAATLSL----S-YIPMMSWVAVSPVILIDAG 249 (413)
T ss_pred Ccc------ccCCCC--Ch-----------HHHHHHHHHHHcCHHHHHHHHHHHH----H-HHHHHHHHHhChHHHHHhc
Confidence 000 000000 00 0001135567777655543222221 1 11234444566777765 4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHH
Q psy3807 344 GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISI 423 (483)
Q Consensus 344 g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (483)
|.+..+.++.......+.++++.+.+.+.++..+++.......+..++..++....... .+ ..+......
T Consensus 250 g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~---------~~-~~~~~~~~~ 319 (413)
T PRK15403 250 GMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW---------PH-VWLWSVLGT 319 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc---------cc-cHHHHHHHH
Confidence 88888888888778888888888888766544443333322233333333222211100 00 111122233
Q ss_pred HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+++..+.+..... ....+ ..-....+|++.++.+.........++....++.+
T Consensus 320 ~l~~~G~~~~~p~-~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~ 372 (413)
T PRK15403 320 SLYAFGIGLIFPT-LFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWF 372 (413)
T ss_pred HHHHHHHHHHhHH-HHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333332211 11111 11122347999999999988888888887776644
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.34 E-value=9.3e-11 Score=108.19 Aligned_cols=264 Identities=13% Similarity=0.069 Sum_probs=176.2
Q ss_pred HhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC---------------------------------
Q psy3807 164 DVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------- 210 (483)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------- 210 (483)
+.+.+++|++.+.. |+++++..++..+.+++..+++.|+|.
T Consensus 36 ~~Ir~~~gls~s~a------GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~ 109 (395)
T COG2807 36 DEIRQDLGLSFSVA------GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLA 109 (395)
T ss_pred HHHHHHhcccHHHH------HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 45566777776666 899999999999999999999999997
Q ss_pred -----------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc----cC-CC
Q psy3807 211 -----------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN----TG-VI 262 (483)
Q Consensus 211 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~----~~-~~ 262 (483)
+.+++.+......+..+++.+...... ...+||..+.+=++++++-+ .+ .|
T Consensus 110 G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~-~~~gW~~aL~~WAl~allAl~~WlPq~~r 188 (395)
T COG2807 110 GAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQ-HSGGWRGALGFWALLALLALLIWLPQALR 188 (395)
T ss_pred HhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHH-hhccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 777888888888888888766543322 22579988777665554422 11 11
Q ss_pred hHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh
Q psy3807 263 NAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES 342 (483)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
+. ....+.+..+...++|+|.-|... +++..|...++....|.|.++.+
T Consensus 189 ~~--------------------------~~~~~~~~~~~~~vw~~~~aW~vt-----LfmGlqS~~~Y~~~~WLP~ili~ 237 (395)
T COG2807 189 EQ--------------------------AASIATKLVSVRKVWRSPLAWQVT-----LFMGLQSLLYYIVIGWLPAILID 237 (395)
T ss_pred cc--------------------------ccccccccccccccccCchhHHHH-----HHHHhhHHHHHHHHHHHHHHHHH
Confidence 10 001111222334577777655432 23333444567778888999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc-CChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 343 SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM-GRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 343 ~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
.|+|..+++....+..+.+++.++....+.+|. .+|+..+....++.++.+.+.+. + .+..+ .
T Consensus 238 ~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~---P----------~~~~~---l 301 (395)
T COG2807 238 RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA---P----------GQLPI---L 301 (395)
T ss_pred cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---h----------hhHHH---H
Confidence 999999999999999999999999999999976 46677666666666666555432 1 11111 1
Q ss_pred HHHHHHHHhccccccccceeec-cccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 422 SILGFVVFFAVGPGSIPWMITA-ELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~-e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
...++..+.+ +..++.-..+. ..-.++.-+.-.|+.+.++++.+.++|.+++++.|..|+
T Consensus 302 w~~llG~G~G-~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 302 WALLLGLGQG-GAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHhCccc-hHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 1111111111 11222222222 333456667789999999999999999999999999886
No 91
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.32 E-value=4.3e-11 Score=134.22 Aligned_cols=270 Identities=12% Similarity=0.043 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------------------------------
Q psy3807 183 YSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------------------------------- 210 (483)
Q Consensus 183 ~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------------------------------- 210 (483)
.++..+++.+..++.++++|+++||+||
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 3678888899999999999999999998
Q ss_pred ---------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH---hc---cCCChHHHHHHHHHHhC
Q psy3807 211 ---------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG---YN---TGVINAPEKVTLRKLRA 275 (483)
Q Consensus 211 ---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~---~~---~~~~~~~~~~~l~~~~~ 275 (483)
+..+++.+.+..+|.++++.++.... ...+|+..|....+..+. .. .+.+.++..
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 203 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT--ISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPD-------- 203 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH--hccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC--------
Confidence 66777788888888888887765433 346788887444222221 11 111110000
Q ss_pred CcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHH
Q psy3807 276 STQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTT 354 (483)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~ 354 (483)
........++ ....++.+.+++.++...+...+.++. . ..+..+.|.+++ ..|.+....+...
T Consensus 204 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~p~~~~~~~g~~~~~~g~~~ 267 (1140)
T PRK06814 204 LKIDRNIIRS-----------TITLLKYAKADKRIWLAILGISWFWLV----G-AVVLSQLPLLAKETLGGDENVATLFL 267 (1140)
T ss_pred CeeccchHHH-----------HHHHHHHHhcCchHHHHHHHHHHHHHH----H-HHHHHHhHHHHHHHcCCchHHHHHHH
Confidence 0000000000 011355566666555433332332221 2 333345565554 4688888899999
Q ss_pred HHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHh--h--hccchh-hhhhHHHHHHHHHHHHHHH
Q psy3807 355 IGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKE--F--FGFVQE-MIDWMSYLSVISILGFVVF 429 (483)
Q Consensus 355 ~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~--~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 429 (483)
...+++.++|.++.+++.|+.++++.+..+..+.+++.+.+.+...... . ...... ......+...+..+++..+
T Consensus 268 ~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (1140)
T PRK06814 268 AVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAA 347 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHH
Confidence 9999999999999999999888777666555555544443332100000 0 000000 0001122222223333333
Q ss_pred hccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 430 FAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 430 ~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.+. ..+...++..+..|++.||++.|+.+++..++..+++.+.+.+.+.
T Consensus 348 ~~~-~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 348 GGL-YIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHH-hHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322 2233557788999999999999999999999999999988887643
No 92
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=9.8e-12 Score=118.26 Aligned_cols=193 Identities=21% Similarity=0.283 Sum_probs=129.9
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhhccccccccccccccccccchhHHHHHHHHHhh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTY 81 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~~ 81 (483)
+.+|.+||++||++.+....+.++..+++..++. .+.+.+|||. +|+.++.+..+..+...
T Consensus 125 ~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt--~ig~~~GWR~-----------------~F~~ia~l~ll~~~~~~ 185 (394)
T COG2814 125 LAARLVPPGKRGRALALVFTGLTLATVLGVPLGT--FLGQLFGWRA-----------------TFLAIAVLALLALLLLW 185 (394)
T ss_pred HHHHHcCccchhhHHHHHHHHHHHHHHHhccHHH--HHHHHhhHHH-----------------HHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999876664 4567789998 66677777777666666
Q ss_pred ccCC-CC-CcccHHHHHhhhccCCCchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHH
Q psy3807 82 KKVP-ET-KNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIE 159 (483)
Q Consensus 82 ~~~~-e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 159 (483)
+.+| .+ ++....+.++..+-.++.+............+.....|
T Consensus 186 ~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~f---------------------------------- 231 (394)
T COG2814 186 KLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALY---------------------------------- 231 (394)
T ss_pred HhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhH----------------------------------
Confidence 6677 22 22222222222222222211122222222222222333
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
+|+.|++++..|++.+.. +++...+.++..+|..++|+++||--|
T Consensus 232 tYi~P~L~~v~g~s~~~v------s~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~ 305 (394)
T COG2814 232 TYIRPFLESVAGFSVSAV------SLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALA 305 (394)
T ss_pred HhHHHHHHHccCCCHhHH------HHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 778899999999887666 789999999999999999999999333
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHH
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQF 255 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~ 255 (483)
....+.+....++|...+..++.... +..++....++.++..+
T Consensus 306 ~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~--~~~g~~~~~~~~a~l~~ 376 (394)
T COG2814 306 LLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVL--DALGYAATGWVGAALLL 376 (394)
T ss_pred HHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHH
Confidence 55666777777777777777764433 34778877777755443
No 93
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.31 E-value=4.1e-14 Score=142.45 Aligned_cols=74 Identities=34% Similarity=0.452 Sum_probs=63.6
Q ss_pred CccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc-CCCCCcchhh------------------cccccccccccc
Q psy3807 1 MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL-GTDEGWPVLL------------------DSRESDLHRSEL 61 (483)
Q Consensus 1 ~yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~-~~~~~Wr~~~------------------~sp~~l~~~~~~ 61 (483)
+|+.|.+|+++||++.++.+.++.+|.+++..+++.... .++++||+++ ||||||++|||.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRD 204 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccc
Confidence 589999999999999999999999999999888765532 2346899987 999999999999
Q ss_pred ccccccchhHHHHHHHHHhhccC
Q psy3807 62 ENYTFLPFSVMLAVFWLFTYKKV 84 (483)
Q Consensus 62 ~~~~f~~~~~~~a~~~~~~~~~~ 84 (483)
|| |...+.+.++.
T Consensus 205 ~~----------A~~~l~~~~~~ 217 (451)
T PF00083_consen 205 EE----------AEKVLRKLRGK 217 (451)
T ss_pred cc----------ccccccccccc
Confidence 99 99888776543
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.26 E-value=1.6e-10 Score=116.02 Aligned_cols=163 Identities=12% Similarity=0.025 Sum_probs=92.7
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
+.++++|+|.++......++.....+. .....+++.+..-...+..........+..+++.++.+++.||+|+|+
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~ 295 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVT-----RGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR 295 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHH-----HhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 456678887766543333332222211 112223332221111222233344445677788889999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-------CCchh
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-------QGPRP 452 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~R~ 452 (483)
.+..+..+.+++...+... . +...+...+...+...+.+ ...+..+++.+|+.+ .+..|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g 361 (444)
T PRK09669 296 AFKWTIVAFVILSALIFFI---P----------PSNVWLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDG 361 (444)
T ss_pred HHHHHHHHHHHHHHHHHHh---C----------cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcch
Confidence 9887765554433222211 0 0011222222222233332 334667788888875 34556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 453 AAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...|..+.+..++..+++.+.+.+++..|
T Consensus 362 ~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 362 LVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 77899999999999999999999988765
No 95
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.26 E-value=1.2e-11 Score=126.00 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=51.1
Q ss_pred CccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc---------------------CCCCCcchhh----------
Q psy3807 1 MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL---------------------GTDEGWPVLL---------- 49 (483)
Q Consensus 1 ~yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~---------------------~~~~~Wr~~~---------- 49 (483)
+|++|++|+++||+..++.+.+..+|.+++..++..... ..+++||+++
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999888877643210 1135899998
Q ss_pred --------ccccccccccccc
Q psy3807 50 --------DSRESDLHRSELE 62 (483)
Q Consensus 50 --------~sp~~l~~~~~~~ 62 (483)
||||||..|||.|
T Consensus 218 ~~~~~~lpESpr~l~~~~~~~ 238 (502)
T TIGR00887 218 LYFRLTIPETPRYTADVAKDV 238 (502)
T ss_pred HHHHHhCCCCHHHHHHhCcch
Confidence 9999999998874
No 96
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=1e-10 Score=118.68 Aligned_cols=48 Identities=33% Similarity=0.608 Sum_probs=39.2
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccc------cCCCCCcchhh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPI------LGTDEGWPVLL 49 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~------~~~~~~Wr~~~ 49 (483)
|++|++|+++||++.++.+.+..+|.+++++++.... ...++|||++|
T Consensus 144 ~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f 197 (479)
T PRK10077 144 YIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMF 197 (479)
T ss_pred HHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHH
Confidence 6899999999999999999999999999877654322 12457999876
No 97
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.25 E-value=2e-09 Score=107.49 Aligned_cols=160 Identities=14% Similarity=0.160 Sum_probs=107.6
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh--HHHHhhhHHHHH
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR--TLHLYGLGGMFI 390 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr--~~l~~~~~~~~i 390 (483)
+..-++.+++.+ .+.+.+......+.+ ++|++..+.....+...+..++|+++.+++.||+|.| +.++++.....+
T Consensus 283 ~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 283 LFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 333333333333 355666555555554 6899999999999999999999999999999999988 777666554432
Q ss_pred HHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHH
Q psy3807 391 FSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVG 470 (483)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~ 470 (483)
..+ .+.........+ ....+. .....+....+..+..+..-++.+|+.|++..+...|+....++..++++|
T Consensus 362 i~~-~g~~G~~~~~~g------~~~~~~-f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGP 433 (477)
T PF11700_consen 362 IPL-YGLFGFWPSFFG------LKSPWE-FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGP 433 (477)
T ss_pred HHH-HHHHHhhhcccC------cccHHH-HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 222 111111110000 011122 222223333333345666788899999999999999999999999999999
Q ss_pred HHhHHhhhhcCC
Q psy3807 471 LGFPTLNLPYRA 482 (483)
Q Consensus 471 ~~~~~l~~~~g~ 482 (483)
.+++.+.+..|+
T Consensus 434 ll~g~i~~~tg~ 445 (477)
T PF11700_consen 434 LLFGLITDATGS 445 (477)
T ss_pred HHHHHHHHHhCC
Confidence 999999998875
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.25 E-value=8.4e-10 Score=108.04 Aligned_cols=166 Identities=12% Similarity=0.007 Sum_probs=111.4
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSG-LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
+..+++|+|+...-++..++... .......|.+.++++.| .+....+....+..+.+++.-...+++..|+|.|
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~-----~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~ 273 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGI-----SHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK 273 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 34578888876654443333332 34555667777788887 6666667666777888999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH-HHHHHHHHHHhccccccccceeeccccCCCchhHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS-VISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSI 457 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~ 457 (483)
+++.++....++=..+++... ++.+..... .....+....++.... ....++.|..|++.|++++++
T Consensus 274 ~ll~~a~~~~~vR~~l~a~~~-----------~~~~~~~~~~~l~q~lhG~tf~~~~~-a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 274 WLLLLALVAYAVRWLLYAYFS-----------DPWPFIVALQLLGQLLHGLTFGLFHA-ASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-----------CCcHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhCCccchHHHHHH
Confidence 999888777666554444320 011111111 1111223333333222 234778899999999999999
Q ss_pred HHHHH-HHHHHHHHHHhHHhhhhcCC
Q psy3807 458 AVLVN-WIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 458 ~~~~~-~~~~~~~~~~~~~l~~~~g~ 482 (483)
.+.+. -++..+++.+.+.+.|.+|.
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 88765 68999999999999998774
No 99
>PRK09848 glucuronide transporter; Provisional
Probab=99.25 E-value=1.3e-10 Score=116.75 Aligned_cols=163 Identities=11% Similarity=-0.021 Sum_probs=100.3
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
.+++++|+|+++...+..++... +........|+++++ .|.+............+..+++.++.+++.||+|+|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~ 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLI-----STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHH-----HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 35668888776553333333222 233344455666554 465544333334434566788899999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCC-------Cch
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQ-------GPR 451 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~R 451 (483)
+.+.++..+.+++.+.+... + +...+.......+...+.+.. .+..++..+|..|. +.+
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~---~----------~~~~~~~~~~~~l~g~G~~~~-~~~~~al~~~~~~~~~~~~g~r~~ 360 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWV---S----------VWSLPVALVALAIASIGQGVT-MTVMWALEADTVEYGEYLTGVRIE 360 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHc---C----------chhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHhhCccch
Confidence 99998887777766554421 0 011122222222222232222 24455666777654 456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 452 PAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 452 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
|...|+.+....++..+++.+.+.+++..|
T Consensus 361 G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 361 GLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999998887655
No 100
>PRK09952 shikimate transporter; Provisional
Probab=99.22 E-value=1.6e-10 Score=115.74 Aligned_cols=156 Identities=16% Similarity=0.006 Sum_probs=87.1
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccc-c-----CCCCCcchhhccccccccccccccccccchhHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPI-L-----GTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAV 75 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~-~-----~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~ 75 (483)
|++|+.|+|+||+..+..+.+..+|.+++..+...+. . ..++|||++|. ..++ +.+
T Consensus 149 ~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~-----------------~~~~-~~l 210 (438)
T PRK09952 149 LAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFL-----------------FSIV-LVL 210 (438)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHH-----------------HHHH-HHH
Confidence 6889999999999999999999999998865543221 1 13579998655 2333 333
Q ss_pred HHHHhhccCCCCCcccHHHHHhh-hccCCC------chhHHHHHHHHHHhhhhhhccccccccCchhhhhhhcccccccc
Q psy3807 76 FWLFTYKKVPETKNKTFEEIVAL-FRTDDG------LTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNT 148 (483)
Q Consensus 76 ~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 148 (483)
..+..++..||+++.+.++.+++ .+++.. ++++............ ..++
T Consensus 211 ~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~----------------------- 266 (438)
T PRK09952 211 IALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCE-LLTM----------------------- 266 (438)
T ss_pred HHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHH-HHHH-----------------------
Confidence 34445555777654322111110 000000 0011111111111111 1111
Q ss_pred ceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCch
Q psy3807 149 GVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGG 212 (483)
Q Consensus 149 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~ 212 (483)
.....|.++++++.+|.+.+.. ..+..+..+...++.++.|+++||+||++
T Consensus 267 -------~~~~~~~~~y~~~~~g~s~~~~------~~~~~~~g~~~~i~~~~~g~l~Dr~grr~ 317 (438)
T PRK09952 267 -------YIVTAFALNYSTQNLGLPRELF------LNIGLLVGGLSCLTIPCFAWLADRFGRRR 317 (438)
T ss_pred -------HHHHHHHHHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 1234577777777777654322 23344455666788899999999999944
No 101
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=4.7e-11 Score=119.40 Aligned_cols=160 Identities=15% Similarity=0.134 Sum_probs=95.5
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc------CCCCCcchhhccccccccccccccccccchhHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL------GTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAV 75 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~------~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~ 75 (483)
|++|+.|+++||++.++.+.+...|.+++.++...... ...+|||++|. .+.++++
T Consensus 148 ~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~------------------i~~~~~l 209 (432)
T PRK10406 148 YMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFA------------------LGAVLAV 209 (432)
T ss_pred HHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH------------------HHHHHHH
Confidence 68999999999999999999999998888766433221 13679999665 4444444
Q ss_pred HHHHhhccCCCCCcccHHHHHh--hhccCCCchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecC
Q psy3807 76 FWLFTYKKVPETKNKTFEEIVA--LFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINA 153 (483)
Q Consensus 76 ~~~~~~~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 153 (483)
..++.++..||+++.|.++.++ ..++..+ +++............ ..++
T Consensus 210 l~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~-~~~~---------------------------- 259 (432)
T PRK10406 210 VALWLRRQLDETSQQETRALKEAGSLKGLWR-NRRAFIMVLGFTAAG-SLCF---------------------------- 259 (432)
T ss_pred HHHHHHhcCCCCchHHHhhhcccccHHHHHh-hHHHHHHHHHHHHHH-HHHH----------------------------
Confidence 4455556677765443221111 0000000 011111111111100 1111
Q ss_pred chHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhHH
Q psy3807 154 PEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVN 217 (483)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~ 217 (483)
..+..|+|+++.+.+|.+.++. +...++..++..++.++.|+++||+||++.....
T Consensus 260 --~~~~~~lp~~l~~~~g~s~~~~------~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~ 315 (432)
T PRK10406 260 --YTFTTYMQKYLVNTAGMHANVA------SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCF 315 (432)
T ss_pred --HHHHHHHHHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 1234788888888777765443 5666666777778889999999999998755433
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=7e-10 Score=112.21 Aligned_cols=140 Identities=12% Similarity=-0.049 Sum_probs=85.5
Q ss_pred HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
....+.+++.+....+............+..+++.++.+++.||+|+|+.+.++..+.+++.+.+.......
T Consensus 249 ~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~-------- 320 (473)
T PRK10429 249 IINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA-------- 320 (473)
T ss_pred HHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC--------
Confidence 333344455444332333444455555688899999999999999999999887766555544433211111
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-------CCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-------QGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+...+..++...+...+.+. ..+..+++.+|..+ .+..|...|..+.+..++..+++.+.+.+++..|
T Consensus 321 --~~~~~~~~i~~~l~g~~~~~-~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 321 --PHNALLIVIAGILLNIGTAL-FWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred --chhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00112222222222222222 23445677788854 4445667899999999999999999999988765
No 103
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.21 E-value=4.1e-10 Score=113.65 Aligned_cols=132 Identities=13% Similarity=0.034 Sum_probs=99.1
Q ss_pred HhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 334 YYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 334 ~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
...|.+.+ ..|.+....++.....+++.++|+++.+++.+|+++++++..+.++.+++.+.+++..
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~------------- 305 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP------------- 305 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch-------------
Confidence 34566664 4688888888999999999999999999999999999888888777777666655431
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+.....+++...+... ......+...+..|.++||++.++..++...+..++..+.+.+.+.+|
T Consensus 306 --~~~~~~~~l~l~G~~~~~-~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 306 --SFWLALIALFLAGAAWII-ANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred --HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 122333333333333332 223344667889999999999999999999999999999999998876
No 104
>PRK15075 citrate-proton symporter; Provisional
Probab=99.18 E-value=1.9e-09 Score=107.94 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=90.7
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc------CCCCCcchhhccccccccccccccccccchhHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL------GTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAV 75 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~------~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~ 75 (483)
|++|++|+++||+..++.+.+..+|..++..++..... ..++|||++|. .+.+...
T Consensus 141 ~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~------------------~~~~~~~ 202 (434)
T PRK15075 141 YLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFL------------------IGCLIVP 202 (434)
T ss_pred HHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH------------------HHHHHHH
Confidence 68999999999999999988877777776666543211 24679998655 2333333
Q ss_pred HHHHhhccCCCCCcccHHHHHhhhccCCCchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCch
Q psy3807 76 FWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPE 155 (483)
Q Consensus 76 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 155 (483)
..+..++..||+++...++.+...++..+..++............+.... ..
T Consensus 203 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~ 254 (434)
T PRK15075 203 FIFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTV----------------------------SF 254 (434)
T ss_pred HHHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHH----------------------------HH
Confidence 33333444555432111111000000000000111111111111100000 01
Q ss_pred HHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhH
Q psy3807 156 KNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTV 216 (483)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~ 216 (483)
..+..|.|.++++..|.+.++. ++......++.+++.+++|+++||+||++....
T Consensus 255 ~~~~~~~p~~l~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 309 (434)
T PRK15075 255 YLITVYTPTFGKTVLHLSAADS------LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIA 309 (434)
T ss_pred HHHHHHHHHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 1234677888877778765544 567777888889999999999999999876443
No 105
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.17 E-value=3e-09 Score=105.69 Aligned_cols=179 Identities=16% Similarity=0.095 Sum_probs=103.3
Q ss_pred hhhhhcc-CCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh--cCCCCc-c---------hhHHHHHHHHHHHHHHHh
Q psy3807 301 MSELLCS-STLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES--SGLSEK-T---------AKFTTIGIGAVMVTMTII 367 (483)
Q Consensus 301 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~-~---------~~~~~~~~~~~~~~g~~~ 367 (483)
.+++++. ++.-+.+...+..+++.- .+++.+..|.+.+..+ .+-++. . ..+.....++...+.+++
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffsW-~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~ 324 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLNW-IAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG 324 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 223344444455554433 3566666666666543 222211 1 123344556666677778
Q ss_pred HHHHhhccCC-hHHHHhhhHHHHHHHHHHHHHHHHHh---hhccchh---hhhhHHHHHHHHHHHHHHHhccccccccce
Q psy3807 368 SIPLMDRMGR-RTLHLYGLGGMFIFSIFITISLLIKE---FFGFVQE---MIDWMSYLSVISILGFVVFFAVGPGSIPWM 440 (483)
Q Consensus 368 ~~~l~dr~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (483)
-.++.+|+|+ |+...++.++.++++....+.....+ ..+..+. .+....+..++.+....+.++. ..+++++
T Consensus 325 l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~-~~siPfa 403 (477)
T TIGR01301 325 MEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI-TYSIPFA 403 (477)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH-HHHHhHH
Confidence 8888999985 67778888888887776665433210 0000000 0000113333333333333333 4567899
Q ss_pred eeccccCCC--chhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 441 ITAELFSQG--PRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 441 ~~~e~~p~~--~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+++|..|.+ ..|..+|+.|.+-.+..++.+...+.+.+..|
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g 446 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG 446 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999954 44899999999999999999988888766665
No 106
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.17 E-value=2e-08 Score=101.37 Aligned_cols=132 Identities=8% Similarity=-0.029 Sum_probs=78.3
Q ss_pred HHhHHHHHhhcCCCC---cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHH-HhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 333 FYYSTALFESSGLSE---KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLH-LYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~---~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
.+|+.....-.+.+. ...++...+.+.+...|.++.+.+..+++|-|.. +++...+.+++-.+.... +
T Consensus 331 ~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~--~------ 402 (599)
T PF06609_consen 331 ILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR--P------ 402 (599)
T ss_pred HHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc--C------
Confidence 444444444444443 2456777788888999999999999999885554 456555554333333210 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+ .....+ ....+...+.+... ....+.+.-..|++.-++++|+..++..+|+.++.-++..+++
T Consensus 403 -~-n~~~~i---~~~~l~g~giG~~~-~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 403 -D-NKNAAI---AFLVLAGFGIGGIL-VPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred -C-CcchHH---HHHHHHHHhHHHHH-HHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 111111 11111122222111 1233455567799999999999999999999998888766553
No 107
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.13 E-value=3.3e-10 Score=114.49 Aligned_cols=159 Identities=15% Similarity=0.167 Sum_probs=96.3
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCC-CCcchhhccccccccccccccccccchhHHHHHHHHHh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTD-EGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFT 80 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~-~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~ 80 (483)
+++|+.|+++||++.++.+.+..+|..++..++.. .... .|||.+|. .....++++.+.++..
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~--l~~~~~gw~~~f~--------------i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGW--LCESWGGWPMIFY--------------VFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCCCeehh--------------hhhHHHHHHHHHHHHH
Confidence 57899999999999999999999999998887643 2334 48998665 3344455555555554
Q ss_pred hccCCCCCcccHH----HHHhhhccCC-----CchhHHHH---HHHHHHhhhhhhccccccccCchhhhhhhcccccccc
Q psy3807 81 YKKVPETKNKTFE----EIVALFRTDD-----GLTFHLTY---TILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNT 148 (483)
Q Consensus 81 ~~~~~e~~~~~~~----~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 148 (483)
.++.|++++++.+ ..++..++++ +..++... ......+..+...+
T Consensus 219 ~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 275 (465)
T TIGR00894 219 PADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFW----------------------- 275 (465)
T ss_pred hcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHH-----------------------
Confidence 4445544322211 1111111110 11111111 11111111111111
Q ss_pred ceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 149 GVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 149 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
....+..|+|.++.+.+|.+..+. ++..++..++..++.+++|+++||++|
T Consensus 276 -----~~~~~~~~lp~~l~~~~g~s~~~~------g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 276 -----LYTILPTYLPTFISWVLRVSGKEN------GLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred -----HHHHHHHHHHHHHHHHhCcChHHh------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112345788999988888876655 788888999999999999999998764
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.13 E-value=4.1e-09 Score=102.65 Aligned_cols=162 Identities=14% Similarity=0.097 Sum_probs=107.3
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChH
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRT 379 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~ 379 (483)
+..++|||+++...+..++.... .+.......++.+ .+|.+...............+++.++...+.+|+|+|+
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~~~~-----~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~ 303 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLLFIA-----FNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK 303 (467)
T ss_pred HHHHHccchHHHHHHHHHHHHHH-----HHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH
Confidence 34567777766655433333332 2322223333333 24555556666777777778888999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-------CCchh
Q psy3807 380 LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-------QGPRP 452 (483)
Q Consensus 380 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~R~ 452 (483)
++.++.++.+++.+++.+.. .......++..++...+.+ ...+++|++.+|+.. .+.-|
T Consensus 304 ~~~~~~~~~~i~~~~~~f~~-------------~~~~~l~~~~~~i~~~g~~-~~~~l~wam~~d~vDyge~~TG~R~eG 369 (467)
T COG2211 304 LFLIGLLLLAVGYLLLYFTP-------------AGSVVLIVVALIIAGVGTG-IANPLPWAMVADTVDYGEWKTGVRREG 369 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhc-------------CcchHHHHHHHHHHHHHhh-ccccccHHHhcchhhHHHHHhCCCchh
Confidence 99999888888777766542 1112222333333333333 345778999888863 44456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 453 AAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...|...++..++..++..+.+.+++.+|
T Consensus 370 i~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 370 IVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 67888999999999999999999998877
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=7.6e-09 Score=97.83 Aligned_cols=139 Identities=17% Similarity=0.147 Sum_probs=105.4
Q ss_pred hHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 328 GINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
|.+.+......+-. .+|++..+.........++.++|+++.+++.||+|.|+++.++.++..+..+......
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~------- 339 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE------- 339 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-------
Confidence 66777776666665 7899999999999999999999999999999999999998887766555443322210
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
. ........+....+-.+..+..-.+.+++.|++.-++..|+.+.+++..++++|+.+..+.+..|+
T Consensus 340 -----~----~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 340 -----G----ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred -----c----cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 0 111222223333333445566778899999999999999999999999999999999998887764
No 110
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.12 E-value=3.4e-10 Score=106.67 Aligned_cols=160 Identities=16% Similarity=0.242 Sum_probs=106.4
Q ss_pred cccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhhccccccccccccccccccchhHHHHHHHHHhhc
Q psy3807 3 ISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYK 82 (483)
Q Consensus 3 i~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~~~ 82 (483)
++.|.|+++||+..++.+.+.++|..+...+........+.+||..|..|. .++++.++..+.+.|
T Consensus 142 i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pg--------------iiaiival~~~~~~r 207 (448)
T COG2271 142 ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPG--------------IIAIIVALILLFLLR 207 (448)
T ss_pred HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHH--------------HHHHHHHHHHHHHhC
Confidence 567899999999999999999999998877763222345569999887433 356677777788888
Q ss_pred cCCCCCc---c-----cHHHHHhhhccCC-CchhHHHH-------HHHHHHhhhhhhccccccccCchhhhhhhcccccc
Q psy3807 83 KVPETKN---K-----TFEEIVALFRTDD-GLTFHLTY-------TILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGY 146 (483)
Q Consensus 83 ~~~e~~~---~-----~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 146 (483)
+.|++.. - +..|..++.++.. ...++... .++.+++..+.-.
T Consensus 208 d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvY---------------------- 265 (448)
T COG2271 208 DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVY---------------------- 265 (448)
T ss_pred CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHH----------------------
Confidence 8888731 0 1111101111111 11121111 1222222222111
Q ss_pred ccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhcccc--CC
Q psy3807 147 NTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKF--GR 210 (483)
Q Consensus 147 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~--GR 210 (483)
.++.-+..|.|.++.+..|.+..+. ++..+++-++.+.|++++||++||+ ||
T Consensus 266 ------ivR~gi~dW~p~YL~e~k~~s~~~a------~~a~~lfE~agl~G~Ll~GwlSDklfkgr 319 (448)
T COG2271 266 ------VVRYGINDWGPLYLSEVKGFSLVKA------NWAISLFEVAGLPGTLLAGWLSDKLFKGR 319 (448)
T ss_pred ------HHHHHHhhhHHHHHHHhcCCCHHHH------HHHHHHHHHHhhHHHHHHHHHHHHhcccc
Confidence 1444567899999999999998887 6899999999999999999999996 55
No 111
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.12 E-value=8.4e-10 Score=103.50 Aligned_cols=159 Identities=11% Similarity=0.088 Sum_probs=104.1
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
...+++++|+++. -.++.+++...+ .....+.+.++.+ .|++..++.........+.++|.+++.+++.|+...
T Consensus 228 ~~~~l~~~~~~~~-gvl~~FlYVG~E----va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 228 GLSSLFQNKHLRL-GVLAIFLYVGAE----VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred hHHHHHhChHHHH-HHHHHHHHHhHH----HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 4677887776544 334444444433 3344455666655 788888999999999999999999999999999988
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
|.+.+...+..+.++...+.. ..+.+....... .+.....|..+....+..|.+ .+..|..
T Consensus 303 k~Laf~a~~~ill~~~~~l~~----------------g~v~~~~l~~ig-~F~simfPTIfslal~~l~~~--ts~~s~~ 363 (422)
T COG0738 303 KYLAFYALIAILLLLAVALIG----------------GVVALYALFLIG-LFNSIMFPTIFSLALKNLGEH--TSVGSGL 363 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----------------ChHHHHHHHHHH-HHhHHHHHHHHHHHHhccCcc--cccccee
Confidence 877666554444444333321 122222333333 333334566777778888833 4445555
Q ss_pred HHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 459 VLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
..+.-+|+.+.|.+.+.+.|+.|.
T Consensus 364 l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 364 LVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred eeeheecchHHHHHHHHHHHhhhh
Confidence 566788999999999999998874
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.12 E-value=9.8e-11 Score=112.70 Aligned_cols=160 Identities=13% Similarity=0.001 Sum_probs=100.7
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhh----cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFES----SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG 376 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g 376 (483)
..+++|+|++|.-.+..+..... +..+-..-+.+++. .+.+....+......-+.+++.-.+..++.+|+|
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~-----Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAI-----YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhcchhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45677777666543333333222 23332223333333 2333445666777778889999999999999999
Q ss_pred ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHH
Q psy3807 377 RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMS 456 (483)
Q Consensus 377 rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g 456 (483)
.|+.++++..++++=.+..++.. ..+.....-.+...-+.+..-+ ..-|.++.+|+|..++...
T Consensus 288 ~k~~Lllag~i~~iRi~~~~~~~---------------~~~~i~~~klLH~~e~~l~lva-~fkYI~~~fd~rlsAt~y~ 351 (412)
T PF01306_consen 288 AKNLLLLAGVIMAIRIIGSGFAT---------------NPWVISLIKLLHALEFPLLLVA-AFKYITAHFDKRLSATLYL 351 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----------------SHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHS-GGGHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHhhhc---------------chHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCHhHHHHHHH
Confidence 99999988888777665555432 1222222223333222222222 2367789999999999999
Q ss_pred HH-HHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 457 IA-VLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 457 ~~-~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+. +....++.++.+...+.+.|.+|
T Consensus 352 v~~~~~~~~~~~i~s~~~G~lyd~~G 377 (412)
T PF01306_consen 352 VGFQFAKQIGIIILSPLAGYLYDRIG 377 (412)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHhhHhhcC
Confidence 86 57788999999999999999886
No 113
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.11 E-value=1.4e-09 Score=108.52 Aligned_cols=157 Identities=13% Similarity=0.097 Sum_probs=111.2
Q ss_pred CCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc-CChHHHHhhhH
Q psy3807 309 TLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM-GRRTLHLYGLG 386 (483)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grr~~l~~~~~ 386 (483)
++.+.+...+.......++. +.+..+.|.+++ +.|++..++............++.+++|+++||+ |||+.++++.+
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~-Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSF-YGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred cCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 35555666666665555533 555566676664 5799999999888888899999999999999999 99999999988
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCC--chhHHHHHHHHHHHH
Q psy3807 387 GMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQG--PRPAAMSIAVLVNWI 464 (483)
Q Consensus 387 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~R~~~~g~~~~~~~~ 464 (483)
++.++.+++..... ........+.+...+.+. ..+...++.+|.+|++ .|+++.++.....++
T Consensus 85 l~~lg~lll~~~~~--------------~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl 149 (493)
T PRK15462 85 LMAIGHVVLGASEI--------------HPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV 149 (493)
T ss_pred HHHHHHHHHHHhhc--------------chhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHH
Confidence 88887665432100 001111111222222222 2244457789999986 799999999999999
Q ss_pred HHHHHHHHhHHhhhhcC
Q psy3807 465 ANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 465 ~~~~~~~~~~~l~~~~g 481 (483)
+++++|.+.+.+.+.+|
T Consensus 150 G~~iap~l~g~L~~~~G 166 (493)
T PRK15462 150 GSIIAPIACGYAQEEYS 166 (493)
T ss_pred HHHHHHHHHHHHHhhhC
Confidence 99999999999987654
No 114
>PRK03545 putative arabinose transporter; Provisional
Probab=99.10 E-value=7.5e-10 Score=109.21 Aligned_cols=150 Identities=11% Similarity=0.094 Sum_probs=86.3
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhhccccccccccccccccccchhHHHHHHHHHhh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTY 81 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~~ 81 (483)
+++|+.|+++||+..++.+.+..+|..++..++.. ..+..|||++|. ..+++..+......
T Consensus 121 ~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~~gw~~~f~-----------------~~~~~~~l~~~~~~ 181 (390)
T PRK03545 121 LAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQYLGWRTTFL-----------------AIGGGALITLLLLI 181 (390)
T ss_pred HHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHHhcHHHHHH-----------------HHHHHHHHHHHHHH
Confidence 56889999999999999999999999998877642 234569998654 33333333322222
Q ss_pred ccCCCCCcccHHHHHhhhccCCCchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHH
Q psy3807 82 KKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKF 161 (483)
Q Consensus 82 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 161 (483)
+..||+++++.++.++ .++..+. +..+.... ..... ...+ .....+
T Consensus 182 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~~~~~-~~~~------------------------------~~~~~~ 227 (390)
T PRK03545 182 KLLPLLPSEHSGSLKS-LPLLFRR-PALVSLYL-LTVVV-VTAH------------------------------FTAYSY 227 (390)
T ss_pred HhCCCCCCCCcchHHH-HHHHHhC-cHHHHHHH-HHHHH-HHHH------------------------------HHHHHH
Confidence 2234332222111111 1111011 11111111 11000 0011 011245
Q ss_pred HHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
.++++.+..|.+.++. +++.+...++.+++.++.|+++||+||
T Consensus 228 ~~~~l~~~~g~s~~~~------~~~~~~~~~~~~~g~~~~g~l~dr~~~ 270 (390)
T PRK03545 228 IEPFVQQVAGLSENFA------TLLLLLFGGAGIIGSVLFSRLGNRHPS 270 (390)
T ss_pred HHHHHHHhcCCCccHH------HHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 6677776677766554 677788888999999999999999998
No 115
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.09 E-value=1.7e-08 Score=101.90 Aligned_cols=123 Identities=11% Similarity=-0.023 Sum_probs=72.6
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHhhccCC-----hHHH--HhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHH
Q psy3807 350 AKFTTIGIGAVMVTMTIISIPLMDRMGR-----RTLH--LYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVIS 422 (483)
Q Consensus 350 ~~~~~~~~~~~~~~g~~~~~~l~dr~gr-----r~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (483)
......+..+.-++...+..++..|.+| +... .+|.++.++++..+++..... ++..+...+..+..
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~------~~~~~~s~~~~i~~ 387 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA------DAGGLTSPWFMVLI 387 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCccCHHHHHHH
Confidence 3455555555555555554443333333 3333 567777777766665432111 01111122323332
Q ss_pred HHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 423 ILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.. +.........|....+.+|..|++.|++.+|+......+++.+++.+.....+.
T Consensus 388 ~~-~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 388 YL-FQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HH-HHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 333333445566778889999999999999999999999999998887765443
No 116
>KOG2504|consensus
Probab=99.08 E-value=6.1e-10 Score=111.85 Aligned_cols=160 Identities=22% Similarity=0.163 Sum_probs=109.4
Q ss_pred hhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHH-
Q psy3807 302 SELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTL- 380 (483)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~- 380 (483)
.+++|++.+. ...........+++....+.|.+.++.|++..++.....+.++..+++.++.|++.|+...++.
T Consensus 292 ~~ll~~~~fl-----~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~ 366 (509)
T KOG2504|consen 292 LSLLKDPKFL-----LLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV 366 (509)
T ss_pred HHHHcCchHH-----HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH
Confidence 4667665433 2333333333466777788888888999999999999999999999999999999999884433
Q ss_pred -HHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHH
Q psy3807 381 -HLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAV 459 (483)
Q Consensus 381 -l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~ 459 (483)
..++.++.+++.+.+... ..+..+...+++..+.......+...++.|+.+.+.-..+.|+..
T Consensus 367 ~~~~~ll~~gl~~~~~p~~----------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l 430 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFA----------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHHHHHHHHHHh----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHH
Confidence 334444444443222221 112222222322222222334445567889999999999999999
Q ss_pred HHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 460 LVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 460 ~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
.+..++..++|-+.+.+.|..|+
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGN 453 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCC
Confidence 99999999999999988887764
No 117
>PRK11462 putative transporter; Provisional
Probab=99.07 E-value=1.2e-08 Score=102.62 Aligned_cols=117 Identities=12% Similarity=0.027 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHh
Q psy3807 351 KFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFF 430 (483)
Q Consensus 351 ~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (483)
........+..+++.++++++.||+|+|+....+..+.++..+.+.+. + ........+..++...+.
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~l~g~~~ 332 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV---P----------MQASITMFVFIFVIGVLH 332 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh---c----------hhHHHHHHHHHHHHHHHH
Confidence 344556678888999999999999999988765544433322222111 1 001111122222222222
Q ss_pred ccccccccceeeccccC-----CCchhHH--HHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 431 AVGPGSIPWMITAELFS-----QGPRPAA--MSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 431 ~~~~~~~~~~~~~e~~p-----~~~R~~~--~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
....++.+.+.+|... +..|..+ .+..++...++..+++.+.+.+++..|
T Consensus 333 -~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 333 -QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred -HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2233445666666655 3345544 466669999999999999998887654
No 118
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.06 E-value=1.3e-09 Score=113.93 Aligned_cols=132 Identities=14% Similarity=0.027 Sum_probs=98.9
Q ss_pred HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
.+....|.+.++.|.+..+.++......++.+++.+++++++||+|||+.++++.++.+++.++..+...
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s---------- 254 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQG---------- 254 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 3455667777888999888888889999999999999999999999999999988777776665543211
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.+..++..++..++.+ +..++..++++|.+|++.|++.+++......++.++++.+...+..
T Consensus 255 -----~~~llv~R~l~G~g~g-~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 255 -----YGFFLFCRLLSGFGIG-GAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred -----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222233333222 2346678899999999999999999999999988888876555544
No 119
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.06 E-value=2.5e-08 Score=100.84 Aligned_cols=115 Identities=10% Similarity=-0.101 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHH-------HHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTL-------HLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~-------l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
...+..+..++.+++.+++.||++||+. +.+|.++.+++++.+....... .+ .+.....+..+....+
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~--~~---~~~~~s~~~~i~~~~l 388 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWF--AD---AQGLTSPWFIVLVYLF 388 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhh--cC---CCCccCHHHHHHHHHH
Confidence 3334445566777778899999998863 6677777776665443221111 00 0011112333333333
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
...+-.+ ..+....++.+..|++.++.++|+.+....+++.++..+.
T Consensus 389 ~g~Ge~~-~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 389 QSLGELF-ISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHH-HhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222 3344456677888999999999999999999888887665
No 120
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.05 E-value=9.4e-09 Score=106.95 Aligned_cols=90 Identities=12% Similarity=0.166 Sum_probs=60.6
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccCC
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMGR 377 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~gr 377 (483)
.+++++++|.++...+...+.. .....+..|.|.+++ +.|++..+++....+..+ +.+++.+++++++||+++
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~-----~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDS-----LAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 4567888776544333332222 244566677787776 579998888888776665 568999999999999984
Q ss_pred --hHHHHhhhHHHHHHHHH
Q psy3807 378 --RTLHLYGLGGMFIFSIF 394 (483)
Q Consensus 378 --r~~l~~~~~~~~i~~~~ 394 (483)
|+.+.++.....++.+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 397 NVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 56666666655555433
No 121
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.03 E-value=1.5e-08 Score=102.79 Aligned_cols=47 Identities=21% Similarity=0.345 Sum_probs=38.3
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCC-CCCcchhhc
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGT-DEGWPVLLD 50 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~-~~~Wr~~~~ 50 (483)
+++|+.|+++||+..++.+.+..+|.+++..++... .. .+|||.+|.
T Consensus 131 ~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l--~~~~~GWr~~f~ 178 (491)
T PRK11010 131 WKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWL--ADRYLGWQGMYW 178 (491)
T ss_pred HHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccCHHHHHH
Confidence 568999999999999999999999999997665432 23 469999664
No 122
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.00 E-value=1.2e-09 Score=110.37 Aligned_cols=161 Identities=14% Similarity=0.031 Sum_probs=91.1
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccC-CCCCcchhhccccccccccccccccccchhHHHHHHHHHh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILG-TDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFT 80 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~-~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~ 80 (483)
+++|+.|+++||++.++.+.+..+|..++..+....... ...+||..|. .....+++.+..++..
T Consensus 146 ~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~--------------~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 146 TITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFI--------------FPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHH--------------HHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999987765322111 1225887544 2222334444444444
Q ss_pred hccCCCCCcc-cHHHH-------HhhhccCCCch-h---HH-H---HHHHHHHhhhhhhccccccccCchhhhhhhcccc
Q psy3807 81 YKKVPETKNK-TFEEI-------VALFRTDDGLT-F---HL-T---YTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQF 144 (483)
Q Consensus 81 ~~~~~e~~~~-~~~~~-------~~~~~~~~~~~-~---~~-~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 144 (483)
.++.||++.. +.++. ++..+++++.. . .+ . .......+..+....
T Consensus 212 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------------- 272 (467)
T PRK09556 212 GSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYI------------------- 272 (467)
T ss_pred CCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHH-------------------
Confidence 4555554211 11110 00000000000 0 00 0 011111111111110
Q ss_pred ccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 145 GYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 145 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
....+..|.|.++++.+|.+..+. ++..+...++.+++.+++|+++||+||
T Consensus 273 ---------~~~~~~~~~p~yl~~~~g~s~~~a------~~~~~~~~~~~~ig~~~~G~lsDr~g~ 323 (467)
T PRK09556 273 ---------VRIGIDNWSPVYAFQELGFSKEDA------INTFTLFEIGALVGSLLWGWLSDLANG 323 (467)
T ss_pred ---------HHHHHHHHHHHHHHHccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 111234688889988888877655 677888889999999999999999998
No 123
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.99 E-value=3e-08 Score=97.62 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=90.5
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc------CCCCCcchhhccccccccccccccccccchhHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL------GTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAV 75 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~------~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~ 75 (483)
+++|+.|+++||+..+..+.+..+|.+++..++..... ...++||.++. ..+.+...
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~-----------------~~~~~~~~ 182 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFL-----------------VSAVLVLI 182 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHH-----------------HHHHHHHH
Confidence 67899999999999999999999999998776543221 13578998553 33333333
Q ss_pred HHHHhhccCCCCCcccHHHHHhhhccCC-----CchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccce
Q psy3807 76 FWLFTYKKVPETKNKTFEEIVALFRTDD-----GLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGV 150 (483)
Q Consensus 76 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (483)
..+.. ...||+++.+.++.+++.+... +.+++........ .+....
T Consensus 183 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------------- 233 (394)
T TIGR00883 183 GLYLR-RNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGL---VIATTT------------------------- 233 (394)
T ss_pred HHHHH-HhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHH---HHHHHH-------------------------
Confidence 33332 2245543322211111100000 0001011111111 111110
Q ss_pred ecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhh
Q psy3807 151 INAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGT 215 (483)
Q Consensus 151 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~ 215 (483)
.......+.+.++++++|.+.++. +.......++..++.++.|+++||+||++...
T Consensus 234 ---~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 234 ---TFYLITTYLPTYLTQTLGLSANSA------LLVLMLSLILFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred ---HHHHHHHHHHHHHHHhcCCChhHH------HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 011223567777777777665444 67777888889999999999999999977544
No 124
>KOG2615|consensus
Probab=98.98 E-value=4.5e-09 Score=97.52 Aligned_cols=122 Identities=11% Similarity=0.023 Sum_probs=76.6
Q ss_pred hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC--ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHH
Q psy3807 341 ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG--RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYL 418 (483)
Q Consensus 341 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (483)
+..|+++.+.+......++.+.+.........||.+ -+..+..+...+.-..+.+... . ....
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~--------------~-~~~~ 354 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA--------------R-TPVV 354 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc--------------c-cchh
Confidence 457889989888888888888888877777777765 3444433333322222221110 0 1111
Q ss_pred HHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 419 SVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
......+..+..+.+... ...+.....|.+.||+..|+..+.+.++-+++|.+.+.++.
T Consensus 355 l~~~s~l~sf~~A~~vt~-Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 355 LYLGSTLKSFSTASVVTC-LTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hhHHHHHHHHHHHHhhHH-HHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 222222333333333333 33566788899999999999999999999999998876654
No 125
>TIGR00895 2A0115 benzoate transport.
Probab=98.97 E-value=4.9e-09 Score=103.44 Aligned_cols=138 Identities=17% Similarity=0.073 Sum_probs=104.4
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
......++.|.+.++.|.+..+.+.......++..++.++.++++||+|||+.+..+..+..++.+.+....
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 103 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT-------- 103 (398)
T ss_pred HHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc--------
Confidence 345566778888889999988888888888999999999999999999999999988877777666554321
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+...+...+...+.+ ...+....+.+|.+|.+.|+++.++......++..+++.+.+.+.+..|
T Consensus 104 -------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 169 (398)
T TIGR00895 104 -------NVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG 169 (398)
T ss_pred -------chHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc
Confidence 01112222222222222 2345566788999999999999999999999999999999988877544
No 126
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.93 E-value=9.2e-09 Score=102.94 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=104.0
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
..+..+.|.+.++.|.+..+.+.......++..++.++.+++.||+|||+.+.++.++.+++.++......
T Consensus 40 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--------- 110 (434)
T PRK11663 40 KSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSS--------- 110 (434)
T ss_pred hhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhH---------
Confidence 34566788888999999999999999999999999999999999999999999888888877765554211
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+...+..++...+.+.+. +....+.+|.+|++.|++++++.+....++..+++.+.+.+.+.+|
T Consensus 111 ------~~~l~~~~~l~g~~~g~~~-~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 111 ------LWAFALLWVLNAFFQGWGW-PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred ------HHHHHHHHHHHHHHHHccc-hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 1122222222223333322 3445777899999999999999999999999999998888876554
No 127
>KOG2563|consensus
Probab=98.93 E-value=1.1e-07 Score=90.56 Aligned_cols=167 Identities=12% Similarity=0.033 Sum_probs=104.4
Q ss_pred ccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC
Q psy3807 298 KISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR 377 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 377 (483)
..+.++++|++++. +..+. ....+..++.....+-..+.-.|++...++.......+++++++++++.+.||.+.
T Consensus 256 ~~si~~~~~n~~F~----il~~~-ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~ 330 (480)
T KOG2563|consen 256 PKSIKSCFKNRQFI----ILAIC-YGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKK 330 (480)
T ss_pred HHHHHHHHcCccHH----HHHHH-HhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34677888887653 22221 22222223333222222333447777889999999999999999999999999875
Q ss_pred -hHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHH
Q psy3807 378 -RTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMS 456 (483)
Q Consensus 378 -r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g 456 (483)
|...++......++...+....... ...+.+...+.....+..+.-|+-.-+..|..=+..-++..|
T Consensus 331 fk~~~~v~~~~~~v~~~~l~~~t~~~------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 331 FKLTTLVLYLFALVGTLMLLTCTLFL------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 4444444444444422111111111 111233333444555666667788888888765566689999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 457 IAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+.+..+++.+++-.+......+..+
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHhhccC
Confidence 9999999999999998888877765
No 128
>PRK10054 putative transporter; Provisional
Probab=98.92 E-value=1.8e-08 Score=99.50 Aligned_cols=135 Identities=14% Similarity=0.007 Sum_probs=97.6
Q ss_pred hHHHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 328 GINAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
+......+.|.++ ++.|.+..+.++......+...++.++.|+++||+|||+.++.+..+..++.+.+.+...
T Consensus 22 g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~------ 95 (395)
T PRK10054 22 GRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNN------ 95 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhH------
Confidence 4444444555444 568999999999999999999999999999999999999998888777666655443211
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.+..+....+.....+ ...+....+.+|..|++.|+++.|+.+....++..++|.+.+.+.+
T Consensus 96 ---------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 96 ---------VTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred ---------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222222222222 2234456777899999999999999999999999999999888764
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.92 E-value=1.1e-08 Score=101.59 Aligned_cols=148 Identities=12% Similarity=-0.090 Sum_probs=107.6
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHH
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSI 393 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~ 393 (483)
+...++.++ .+......+.+..|.+.++.|.+..+.++......++..++.++.+++.||+|||+.+..+.++..++.+
T Consensus 10 ~~~~~~~~~-~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 88 (412)
T TIGR02332 10 IIFLFILFI-FSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAST 88 (412)
T ss_pred HHHHHHHHH-HHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 334344333 3333445666677888889999999999999999999999999999999999999999988888887776
Q ss_pred HHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 394 FITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
...+... .+...+.-++...+.+ +..+....+.+|.+|++.|+++.++.+....++..+++.+.
T Consensus 89 ~~~~~~~---------------~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 89 ATMFATG---------------PESLYLLRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHhcC---------------HHHHHHHHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654211 1112222222222222 22344556789999999999999999999999999999988
Q ss_pred HHhhh
Q psy3807 474 PTLNL 478 (483)
Q Consensus 474 ~~l~~ 478 (483)
+.+.+
T Consensus 153 ~~l~~ 157 (412)
T TIGR02332 153 GYILA 157 (412)
T ss_pred HHHHh
Confidence 77753
No 130
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.92 E-value=1.5e-08 Score=101.12 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=102.9
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
......+..|.+.++.|.++.+.+.......++..++.++.++++||+|||+.+..+....+++.+.......
T Consensus 33 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------- 105 (426)
T PRK12307 33 DFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------- 105 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH-------
Confidence 3345556667777889999989999999999999999999999999999999999998888887766555321
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
.+...+...+...+.+ +..+....+..|.+|++.|+++.++......++.++++.+.+.+.+..
T Consensus 106 --------~~~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 106 --------VIMLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred --------HHHHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 1122222222222222 233445567789999999999999999999999999998888776654
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.91 E-value=2.7e-08 Score=98.45 Aligned_cols=156 Identities=11% Similarity=-0.067 Sum_probs=110.7
Q ss_pred CCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHH
Q psy3807 309 TLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGM 388 (483)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~ 388 (483)
+.++......+.++... ..........|.+.++.|.+..+.++......++..++.++.|+++||+|||+.++.+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDA-FDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33444444444444333 34455566677788889999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHH
Q psy3807 389 FIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFV 468 (483)
Q Consensus 389 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~ 468 (483)
+++.+.+..... .+......++...+.+ +..+....+..|.+|++.|+++.++......++..+
T Consensus 88 ~~~~~~~~~~~~---------------~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 151 (405)
T TIGR00891 88 SAGTLACGFAPG---------------YITMFIARLVIGIGMG-GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV 151 (405)
T ss_pred HHHHHHHHHhcc---------------HHHHHHHHHHHHhhhh-hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH
Confidence 777666544211 1112222222222222 223445577789999999999999999999999999
Q ss_pred HHHHhHHhhhhcC
Q psy3807 469 VGLGFPTLNLPYR 481 (483)
Q Consensus 469 ~~~~~~~l~~~~g 481 (483)
++.+.+.+.+..+
T Consensus 152 ~~~l~~~l~~~~~ 164 (405)
T TIGR00891 152 AAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHhcC
Confidence 9998888776543
No 132
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.90 E-value=1.8e-08 Score=101.89 Aligned_cols=150 Identities=12% Similarity=-0.055 Sum_probs=100.9
Q ss_pred chHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHH
Q psy3807 311 RKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFI 390 (483)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i 390 (483)
++.+.......+ ..+........+.|.+.++.|.+..+.+.......++..++.++.++++||+|||+.+..+.++.++
T Consensus 35 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 35 MRAFHLSWISFF-TCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 333444433333 3333344555667788889999988888888888888999999999999999999999888777776
Q ss_pred HHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHH
Q psy3807 391 FSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVG 470 (483)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~ 470 (483)
+.++...... .+...+..++...+.+ +..+ ...+++|.+|++.|++++|+.+..+.++..+++
T Consensus 114 ~~~~~~~~~s---------------~~~l~~~r~l~G~~~~-~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~ 176 (476)
T PLN00028 114 AVFCMSLVSS---------------ATGFIAVRFFIGFSLA-TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQ 176 (476)
T ss_pred HHHHHHHhcC---------------HHHHHHHHHHHHHHHH-hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHH
Confidence 6555443211 1111222222222222 1222 234578999999999999999998888888888
Q ss_pred HHhHHhhh
Q psy3807 471 LGFPTLNL 478 (483)
Q Consensus 471 ~~~~~l~~ 478 (483)
.+.|.+.+
T Consensus 177 ~~~~~i~~ 184 (476)
T PLN00028 177 LLMPLVFP 184 (476)
T ss_pred HHHHHHHH
Confidence 87776643
No 133
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.90 E-value=1.1e-07 Score=94.17 Aligned_cols=47 Identities=23% Similarity=0.282 Sum_probs=37.9
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCC-CCCcchhhc
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGT-DEGWPVLLD 50 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~-~~~Wr~~~~ 50 (483)
++.|+.|+++||++.++.+.+..+|.+++..++..+ .. .+|||.+|.
T Consensus 118 l~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l--~~~~~gw~~~f~ 165 (402)
T PRK11902 118 YSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL--ADRVLGWGNTYL 165 (402)
T ss_pred HHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH--HhcccCHHHHHH
Confidence 568999999999999999999999999987766432 23 359998554
No 134
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.90 E-value=1.7e-08 Score=99.16 Aligned_cols=138 Identities=16% Similarity=0.033 Sum_probs=102.3
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
+........|.+.++.|.++.+.++......++..++.++.+++.||+|||+.+..+..+.+++.+.+.....
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~------- 92 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN------- 92 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc-------
Confidence 3344444567788889999999999999999999999999999999999999999888777777665544211
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+...+..++...+.+ ...+....+..|.+|++.|+++.++.+....++..+++.+.+.+.+..|
T Consensus 93 --------~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 157 (385)
T TIGR00710 93 --------IETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS 157 (385)
T ss_pred --------HHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1112222222222222 2234455778899999999999999999999999999999888877543
No 135
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.90 E-value=6.6e-08 Score=91.85 Aligned_cols=134 Identities=12% Similarity=0.055 Sum_probs=90.9
Q ss_pred HHHHHHhHHHHHhh---cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhh
Q psy3807 329 INAVFYYSTALFES---SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFF 405 (483)
Q Consensus 329 ~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 405 (483)
-.....|.+.++++ .|+++.+..........+..+|.++.+++.||+|+|+.+.++..+.+++.++.... +
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~---~--- 229 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT---H--- 229 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc---C---
Confidence 34556666777753 48888888899999999999999999999999999998877766666554333221 0
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 406 GFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
. ......+.+...+.+ ...|.......+.+|.+ .+++.++. ..+.+|+.+.|.+.+.+.|..|
T Consensus 230 -------~---~~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 230 -------G---YVAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred -------C---HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 0 111122222222222 23344456666777754 46677774 6788999999999999988765
No 136
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.89 E-value=3.8e-09 Score=106.33 Aligned_cols=135 Identities=10% Similarity=-0.099 Sum_probs=95.5
Q ss_pred hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHH
Q psy3807 341 ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSV 420 (483)
Q Consensus 341 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (483)
+..|+++...+......+++.+++..+.+++.+|++.|+.+.++.++.+++.+........... ....+ ..+...
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~----~~gi~-~~~~~~ 355 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNL----AFGIS-DEVFVL 355 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecccc----ccCCC-Ceeeee
Confidence 3579999999999999999999999999999999999999988887777665443211100000 00000 011122
Q ss_pred HHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 421 ISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
....+.....+....+. ..+++|..|++.+++..++.+++.+++..+++.+.+.+.+..|
T Consensus 356 ~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 356 GDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred ehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22223333344444443 5778899999999999999999999999999999888888776
No 137
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.89 E-value=3.1e-08 Score=100.10 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=109.5
Q ss_pred CchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc-cCChHHHHhhhHHH
Q psy3807 310 LRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR-MGRRTLHLYGLGGM 388 (483)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~ 388 (483)
++|.+...++..+...++.+....+...++.++.|.+..++.+.............+++|+++|| +|||++++++.++.
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 45556666666666665554444444444456689988888877777777777788899999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCC--chhHHHHHHHHHHHHHH
Q psy3807 389 FIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQG--PRPAAMSIAVLVNWIAN 466 (483)
Q Consensus 389 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~R~~~~g~~~~~~~~~~ 466 (483)
.++.+.+.+.... .....+...+...+ .....|....+.+|.+|++ .|+.+.++.....+++.
T Consensus 92 ~~g~~~~~~~~~~--------------~~ll~~~~~l~~ig-~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~ 156 (489)
T PRK10207 92 AIGYFMTGMSLLK--------------PDLIFIALGTIAVG-NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGS 156 (489)
T ss_pred HHHHHHHHHhccc--------------hhHHHHHHHHHHhc-cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHH
Confidence 8888777653110 11111222222222 2223345567889999887 45788999999999999
Q ss_pred HHHHHHhHHhhhhcC
Q psy3807 467 FVVGLGFPTLNLPYR 481 (483)
Q Consensus 467 ~~~~~~~~~l~~~~g 481 (483)
.+++.+.|.+.+..|
T Consensus 157 ~~g~~l~g~l~~~~g 171 (489)
T PRK10207 157 LISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999887654
No 138
>KOG4686|consensus
Probab=98.88 E-value=7.1e-09 Score=92.20 Aligned_cols=135 Identities=10% Similarity=0.014 Sum_probs=95.2
Q ss_pred HHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhH-HHHHHHHHHHHHHHHHhhhc
Q psy3807 329 INAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLG-GMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 329 ~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~-~~~i~~~~~~~~~~~~~~~~ 406 (483)
+..+....|.+++ ..|+|+..++.+.........+.+.+.+.++||.||+...+.+.. ...++-..+.+..
T Consensus 280 ~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~------- 352 (459)
T KOG4686|consen 280 WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF------- 352 (459)
T ss_pred HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh-------
Confidence 4555555676665 579999999998888999999999999999999999977765543 3333333333321
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+.++.....+.+..-..++.. |..++-+.|.+.-|++.|.+.++.+++-.+.|.+.+.+.|.-|
T Consensus 353 -------lsPy~~m~~lGLsysllAcsl----WP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 353 -------LSPYTSMTFLGLSYSLLACSL----WPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred -------ccHHHHHHHHhhhHHHHHHHH----hhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 123333333333332333333 4455677788999999999999999999999999999888765
No 139
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.87 E-value=2.1e-08 Score=98.93 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=110.4
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHH
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSI 393 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~ 393 (483)
.+.+.+....++..+........|.+.++.|.+..+.+.......+...++.++.|+++||+|||+.+..+.....++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHH
Confidence 44555566666666767777888999999999988888888888899999999999999999999999988877777666
Q ss_pred HHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 394 FITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
.+.... ..+...+...+...+.+ ...+....+..|.+|++.|+++.++.+....++..+++.+.
T Consensus 84 ~~~~~~---------------~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~ 147 (392)
T PRK10473 84 LCSLAE---------------TSSLFLAGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLG 147 (392)
T ss_pred HHHHhC---------------cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554321 01111222222222111 12334567788999999999999999999999999988887
Q ss_pred HHhhhhc
Q psy3807 474 PTLNLPY 480 (483)
Q Consensus 474 ~~l~~~~ 480 (483)
..+.+..
T Consensus 148 ~~l~~~~ 154 (392)
T PRK10473 148 HLIMLKF 154 (392)
T ss_pred HHHHhCc
Confidence 7766544
No 140
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.87 E-value=2.3e-07 Score=94.37 Aligned_cols=116 Identities=11% Similarity=-0.066 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHHhH----HHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHH
Q psy3807 351 KFTTIGIGAVMVTMTIIS----IPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGF 426 (483)
Q Consensus 351 ~~~~~~~~~~~~~g~~~~----~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
.....+..+..++...+. .++.||.+.++.+.+|.++++++++.+.......+ +......+. .+...+.
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~------~~~~vs~~~-~~~~~~l 391 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAN------DAGIVSVNW-LIASYGL 391 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCccCHHH-HHHHHHH
Confidence 344444554444554444 44455555557777888888888777665432210 000111222 2222333
Q ss_pred HHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 427 VVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
.........|....++.+..|++.||..+|+......+++.++..+.
T Consensus 392 ~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 392 QSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445566677788999999999999988766666666665554
No 141
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.86 E-value=1.3e-08 Score=103.38 Aligned_cols=138 Identities=14% Similarity=-0.006 Sum_probs=106.8
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
.........|.+.++.|.+..+.++......++..++.++.+++.||+|||+.++.+..+..++.+.+....
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------- 88 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP-------- 88 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC--------
Confidence 445666778999999999998999999999999999999999999999999999999888887776655321
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++.. ...........+....+..|.+|++.|+++.++......++..+++.+.+.+.+.+|
T Consensus 89 -------~~~~l~~~~-~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 89 -------NLELMIIFR-VIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred -------CHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 111222222 222222223345566888999999999999999999999999999999888877654
No 142
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.86 E-value=3.2e-08 Score=97.96 Aligned_cols=144 Identities=10% Similarity=-0.050 Sum_probs=98.7
Q ss_pred HHHHHhHHH-HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYSTA-LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
.......|. +.++.|.+..+.+.......+...++.++.|+++||+|||+++..+..+.+++.+.+.......
T Consensus 32 ~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~------ 105 (399)
T PRK05122 32 GLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLA------ 105 (399)
T ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhh------
Confidence 444445555 4567899999999999999999999999999999999999999998887777665554432211
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+.........++..++...+.+. ..+....+..|..|.+.|+++.++......++..+++.+.+.+.+.+|
T Consensus 106 -~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 176 (399)
T PRK05122 106 -AWPVLSLLLLLLGRLLLGIGESL-AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGG 176 (399)
T ss_pred -ccchhHHHHHHHHHHHHHhhHHh-hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 00000111122222222222222 233344566799999999999999988888888888888888776554
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.86 E-value=2.4e-08 Score=101.89 Aligned_cols=137 Identities=12% Similarity=-0.029 Sum_probs=102.4
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
.........|.+.++.|.+..+.+.......++..++.++.++++||+|||+.++++..+.+++.+.+.....
T Consensus 35 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------- 107 (496)
T PRK03893 35 DFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPG------- 107 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhH-------
Confidence 3455556678888889999988888888889999999999999999999999999888877777666554211
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
.+...+...+. .....+..+....+..|.+|.+.|+++.++......++..+++.+.+.+.+.+
T Consensus 108 --------~~~l~~~~~l~-G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 108 --------YWTLFIARLVI-GMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred --------HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 11122222222 22222233445577889999999999999999999999999999988877654
No 144
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.86 E-value=3.3e-08 Score=97.57 Aligned_cols=131 Identities=14% Similarity=0.026 Sum_probs=100.3
Q ss_pred hHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhh
Q psy3807 335 YSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDW 414 (483)
Q Consensus 335 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
..|.+.++.|.++.+.+.......+...++.++.+.+.||+|||+.+..+..+.+++.+......
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------------- 106 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--------------- 106 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC---------------
Confidence 45667788899999999888888999999999999999999999999999888888766654421
Q ss_pred HHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 415 MSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++...+...+.+. ..+....+++|.+|++.|+++.++......++..+++.+.+.+.+.+|
T Consensus 107 ~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g 172 (394)
T PRK10213 107 SFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG 172 (394)
T ss_pred hHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 112222222222222222 334556778899999999999999999999999999999998877654
No 145
>PRK10504 putative transporter; Provisional
Probab=98.86 E-value=2.1e-08 Score=101.53 Aligned_cols=152 Identities=16% Similarity=-0.013 Sum_probs=107.6
Q ss_pred HHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHH
Q psy3807 313 PLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFS 392 (483)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~ 392 (483)
.+....+..++.. .....+....|.+.++.|.+..+.++......++..++.++.++++||+|||+.++.+..+..++.
T Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 11 QLWIVAFGFFMQS-LDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHH-HhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 3334344333333 334556677899999999998888888888888889999999999999999999988877777666
Q ss_pred HHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 393 IFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
+..... . ..+..++..++...+.+ ...+....+..|.+|++.|+++.++......++..+++.+
T Consensus 90 ~~~~~~---~------------~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 153 (471)
T PRK10504 90 LFCALS---G------------TLNELLLARVLQGVGGA-MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL 153 (471)
T ss_pred HHHHHh---C------------CHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 544321 0 11122222222222222 2234556777899999999999999999999999999999
Q ss_pred hHHhhhhcC
Q psy3807 473 FPTLNLPYR 481 (483)
Q Consensus 473 ~~~l~~~~g 481 (483)
.+.+.+..|
T Consensus 154 ~g~l~~~~g 162 (471)
T PRK10504 154 GGLLVEYAS 162 (471)
T ss_pred HHHHHhhcc
Confidence 988877554
No 146
>PRK03699 putative transporter; Provisional
Probab=98.85 E-value=5.3e-08 Score=96.21 Aligned_cols=154 Identities=13% Similarity=0.019 Sum_probs=106.5
Q ss_pred CCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHH
Q psy3807 308 STLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGG 387 (483)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~ 387 (483)
.+.+|.+..+++.++.... ....+....|.+.++.|.+..+.+.......++..++.++.+++.||+|||+.+..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGA-LVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHH-HHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4444545444444433322 234455667888888999998999988889999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHH
Q psy3807 388 MFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANF 467 (483)
Q Consensus 388 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~ 467 (483)
.+++.+...... ..+...+...+...+.+... +....+..|.+|++.|+.+.+..+....+++.
T Consensus 82 ~~i~~~l~~~~~---------------~~~~~~~~~~l~G~~~g~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 145 (394)
T PRK03699 82 MILAVAGLMFSH---------------SLALFSIAMFVLGVVSGITM-SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGM 145 (394)
T ss_pred HHHHHHHHHHcc---------------hHHHHHHHHHHHHHhhHhhc-cchhHHhhhhcccchHHHHHHHHHHHHHHHHH
Confidence 777766554421 11122222233333333222 33456778999999999999998888888888
Q ss_pred HHHHHhHHhhh
Q psy3807 468 VVGLGFPTLNL 478 (483)
Q Consensus 468 ~~~~~~~~l~~ 478 (483)
+++.+.+.+.+
T Consensus 146 ~~~~~~~~l~~ 156 (394)
T PRK03699 146 IFPIIAAYLLA 156 (394)
T ss_pred HHHHHHHHHHh
Confidence 88888777654
No 147
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.83 E-value=3.2e-08 Score=98.21 Aligned_cols=134 Identities=12% Similarity=-0.029 Sum_probs=98.5
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.......|.+.++.|.++.+.+.......++..++.++.++++||+|||+.+..+..+..++.+.+....
T Consensus 32 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------- 101 (406)
T PRK11551 32 QSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW---------- 101 (406)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc----------
Confidence 4455566788888999999999999999999999999999999999999999988877766665544321
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
..+..++..++...+.+. ..+....++.|.+|++.|+++.++.+....++..+++.+...+.+.
T Consensus 102 -----~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 102 -----DFPSLLVARLLTGVGLGG-ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred -----cHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 111222222222222222 2344567788999999999999999999999998888876655443
No 148
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.81 E-value=6.9e-08 Score=97.51 Aligned_cols=148 Identities=15% Similarity=0.167 Sum_probs=105.9
Q ss_pred HHHHHHHhhhcchHHHHHHhHHHHHhh---cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc-cCChHHHHhhhHHHHHH
Q psy3807 316 IGIVMQLSQQFSGINAVFYYSTALFES---SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR-MGRRTLHLYGLGGMFIF 391 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~i~ 391 (483)
......++..+ +++.+..+.|.++++ .|++..+++.......+...++.+++|+++|| +|||+.+.++..+.+++
T Consensus 14 ~l~~~~~~~~~-~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 14 TLFFVELWERF-SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 33334444344 345555566666654 78999999999999999999999999999999 89999999999888888
Q ss_pred HHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccc-cccccceeeccccCCC---chhHHHHHHHHHHHHHHH
Q psy3807 392 SIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVG-PGSIPWMITAELFSQG---PRPAAMSIAVLVNWIANF 467 (483)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~---~R~~~~g~~~~~~~~~~~ 467 (483)
.+.+..... .+...+...+ .+.+.+ ..+....+.+|.+|++ .|+++.++.+...+++..
T Consensus 93 ~~~~~~~~~---------------~~~~~~~~~l--~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ 155 (475)
T TIGR00924 93 HFMLAMSIY---------------PDLIFYGLGT--IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF 155 (475)
T ss_pred HHHHHhccc---------------HhHHHHHHHH--HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence 776654210 1112222222 222222 3355567778988875 489999999999999999
Q ss_pred HHHHHhHHhhhhcC
Q psy3807 468 VVGLGFPTLNLPYR 481 (483)
Q Consensus 468 ~~~~~~~~l~~~~g 481 (483)
+++.+.+.+.+.+|
T Consensus 156 ig~~l~g~l~~~~g 169 (475)
T TIGR00924 156 ISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887644
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.80 E-value=1.1e-07 Score=94.35 Aligned_cols=137 Identities=15% Similarity=0.035 Sum_probs=96.6
Q ss_pred hHHHHHHhHHHHHhhcCCCCcch-----hHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHH
Q psy3807 328 GINAVFYYSTALFESSGLSEKTA-----KFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIK 402 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~-----~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~ 402 (483)
+......+.|.+.++.|.+..+. +.......+...++.++.++++||+|||+.+..+....+++.+.+....
T Consensus 29 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--- 105 (408)
T PRK09874 29 AFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQ--- 105 (408)
T ss_pred HHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHh---
Confidence 44455567788888888876543 5666777888899999999999999999999988777777665544321
Q ss_pred hhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 403 EFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+...+...+...+ .+..+....+..|.+|++.|+++.++......++..+++.+.+.+.+..|
T Consensus 106 ------------~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 170 (408)
T PRK09874 106 ------------NIWQFLILRALLGLL--GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG 170 (408)
T ss_pred ------------hHHHHHHHHHHHHHh--hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111122222222222 22334444567788999999999999999999999999999888876543
No 150
>PRK12382 putative transporter; Provisional
Probab=98.79 E-value=6.2e-08 Score=95.65 Aligned_cols=144 Identities=10% Similarity=-0.092 Sum_probs=95.7
Q ss_pred HHHHHhHHH-HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYSTA-LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
.......|. +.++.|.+..+.+.......+...++.++.|+++||+|||+.+..+.+...++.+.........
T Consensus 32 ~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~------ 105 (392)
T PRK12382 32 GLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILP------ 105 (392)
T ss_pred HHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccc------
Confidence 333344454 4467899999999999999999999999999999999999999988776666544332221110
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.......+..++...+...+.+. ..+....+..|..|++.|+++.++.......+..+++.+.+.+.+..|
T Consensus 106 -~~~~~~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 106 -VSAPFKFALLVVGRLILGFGESQ-LLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 00000111122222222222221 123334566789999999999999998888899899988888776554
No 151
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.78 E-value=6.8e-08 Score=93.34 Aligned_cols=137 Identities=18% Similarity=0.069 Sum_probs=105.4
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
+........|.+.++.|.+..+.+.......+...++.++.+++.||+|||+.+..+..+..++.+.+....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~-------- 85 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS-------- 85 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc--------
Confidence 335556667888888899999999999999999999999999999999999999998888888777665431
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
..+.......+...+.+ ...+....+..|.+|++.|++..++......++..+++.+.+.+.+..
T Consensus 86 -------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 86 -------SLWLLLVGRFLLGLGGG-ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred -------cHHHHHHHHHHHHcccc-cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11122222222222222 234555678899999999999999999999999999999998887754
No 152
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.78 E-value=3.4e-08 Score=98.36 Aligned_cols=163 Identities=15% Similarity=0.026 Sum_probs=108.5
Q ss_pred hhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHH
Q psy3807 303 ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 382 (483)
.+.|+++++..+.. .++..+ +........|.+.++.+.+..+.+.......+...+++++.|+++||+|||+.+.
T Consensus 12 ~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 12 LLKTHPAFRAVFIA-RFISIF----GLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred HHHhCCChhhHHHH-HHHHHH----HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 34456665543333 222222 3355566778888888888888899999999999999999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHH
Q psy3807 383 YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVN 462 (483)
Q Consensus 383 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~ 462 (483)
.+..+.+++.+.+....... ....+...+..++...+.+.. .+....+..|..|++.|+++.++.....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLP----------EPSLLAIYLLGLWDGFFGSLG-VTALLAATPALVGRENLMQAGAITMLTV 155 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcC----------CCcHHHHHHHHHHHHHHHHHH-HHHHhhhhhhccCHHHHHHHHHHHHHHH
Confidence 87776666655544321111 001111222222222222222 2333466789999999999999999999
Q ss_pred HHHHHHHHHHhHHhhhhcC
Q psy3807 463 WIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 463 ~~~~~~~~~~~~~l~~~~g 481 (483)
.++..+++.+.+.+.+..|
T Consensus 156 ~~g~~~g~~l~g~l~~~~~ 174 (417)
T PRK10489 156 RLGSVISPALGGLLIAAGG 174 (417)
T ss_pred hHHHHhHHHHHHHHHHHHh
Confidence 9999999999888876543
No 153
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.1e-07 Score=90.15 Aligned_cols=149 Identities=14% Similarity=0.093 Sum_probs=111.7
Q ss_pred HHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHH
Q psy3807 318 IVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITI 397 (483)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~ 397 (483)
....+...++.++.+....+.+-++.++|+.|..++..+..+.+.+..+..+.+.||+|.|++...+.+++.+-.+.+++
T Consensus 19 S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~ 98 (417)
T COG2223 19 STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAF 98 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 33344444445555555556666788999999999999999999999999999999999999999998888888777776
Q ss_pred HHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 398 SLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
....+ .. +..++ +-...+.+.+...+.-.++++-||++.+|.+.|+.. .+++|..+..++.|.+.
T Consensus 99 a~~~~-----------~~-~~ll~--~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 99 AVTYP-----------ST-WQLLV--IGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred HccCC-----------ch-HHHHH--HHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 53322 11 22222 222223333333445577899999999999999999 99999999999999998
Q ss_pred hhcC
Q psy3807 478 LPYR 481 (483)
Q Consensus 478 ~~~g 481 (483)
...|
T Consensus 164 ~~~g 167 (417)
T COG2223 164 VAFG 167 (417)
T ss_pred HHHh
Confidence 8766
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.76 E-value=8e-08 Score=95.19 Aligned_cols=138 Identities=11% Similarity=-0.110 Sum_probs=93.5
Q ss_pred HHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 332 VFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 332 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
...+.+.++++.|.+..+.+.......++..++.++.+.+.||+|||+.+..+..+.+++.+.+.......
T Consensus 32 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~--------- 102 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGH--------- 102 (402)
T ss_pred HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC---------
Confidence 33455666688899999999999999999999999999999999999999998888777765442211100
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHH-HHHHHHhHHhhhhcC
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIAN-FVVGLGFPTLNLPYR 481 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~g 481 (483)
. ..+.......+...+.+. ..+.......|..|++.|+++.|+.++...++. .+++.+...+.+.+|
T Consensus 103 ~--~~~~l~~~~~i~G~g~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 103 A--NYPLILLFYGIRGLGYPL-FAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred c--cHHHHHHHHHHHHcchHH-HHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0 111111122221111111 112233456688899999999999999988886 577777666666544
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.76 E-value=3.9e-08 Score=96.71 Aligned_cols=136 Identities=16% Similarity=0.010 Sum_probs=104.3
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
..+....|.+.++.|.+..+.++......+...++.++.++++||+|||+.+..+..+.+++.+.+....
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 4555667888888999999999999999999999999999999999999999988887777766655431
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+...+..++...+.+ ...+....+.+|.+|++.|+++.++......++..+++.+.+.+.+..+
T Consensus 81 -----~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 146 (399)
T TIGR00893 81 -----AYVSLYILRVLLGAAEA-PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS 146 (399)
T ss_pred -----CHHHHHHHHHHHHHHHH-hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC
Confidence 11222222233333322 2334556788999999999999999999999999999999887766543
No 156
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=1.1e-07 Score=92.96 Aligned_cols=135 Identities=14% Similarity=0.005 Sum_probs=100.0
Q ss_pred hHHHHHHhHHH-HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 328 GINAVFYYSTA-LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 328 ~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
.......+.|. +.++.|.+..+.++......++..++.++.++++||+|||+.++.+..+..++.+.+.....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~------ 89 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ------ 89 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh------
Confidence 44556667774 66789999999999999999999999999999999999999999998888887766654310
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
..+...+..++.... + +..+....+.+|.+|++.|+++.++......++..+++.+.|.+.+
T Consensus 90 --------~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 90 --------SYSVLLLLRLFIGIA-G-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred --------hHHHHHHHHHHHHHh-c-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 011122222222222 2 2223345678899999999999999998888888888888777665
No 157
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.75 E-value=3.8e-08 Score=97.16 Aligned_cols=46 Identities=11% Similarity=-0.044 Sum_probs=34.6
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCc
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRG 211 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~ 211 (483)
.+.|.++++++|.+.++. +++.+...++.+++.++.|+++||+||+
T Consensus 237 ~~~p~~l~~~~~~~~~~~------g~~~~~~~~~~i~~~~~~G~l~dr~g~~ 282 (393)
T PRK15011 237 INMPLFIINELHLPEKLA------GVMMGTAAGLEIPTMLIAGYFAKRLGKR 282 (393)
T ss_pred HHHHHHHHHHcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 466777777777665443 5666666677788999999999999993
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.74 E-value=9.5e-08 Score=92.56 Aligned_cols=135 Identities=17% Similarity=0.035 Sum_probs=101.7
Q ss_pred HHHHHhHH-HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYST-ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
.......| .+.++.|.+..+.++......+...++.++.+.++||+|||+.+..+..+.+++.+...+. .
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~------ 83 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA---S------ 83 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---C------
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---h------
Confidence 44445556 6677889999999999999999999999999999999999999999988888874444421 1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
..+..++..++...+. ....+....+..|.+|++.|+++.++......++..+++.+.+.+.+.+
T Consensus 84 ------~~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 148 (352)
T PF07690_consen 84 ------NFWLLLIARFLLGIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF 148 (352)
T ss_dssp ------CHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC
T ss_pred ------hHHHHhhhcccccccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc
Confidence 1122222222222222 2344556678899999999999999999999999999999999887654
No 159
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.73 E-value=9.1e-08 Score=93.14 Aligned_cols=141 Identities=10% Similarity=-0.082 Sum_probs=103.0
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.......|.+..+.+.+..+.+.......+...++.++.|+++||+|||+.++.+..+..++.+.+.......
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~------- 88 (365)
T TIGR00900 16 AITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG------- 88 (365)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 4445556777777888888889999999999999999999999999999999988877777666655432111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+...+...+...+...+.+ ...+....+.+|.+|++.|+++.++.+....++..+++.+.+.+.+..|
T Consensus 89 ---~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 156 (365)
T TIGR00900 89 ---GLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG 156 (365)
T ss_pred ---CCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0011222222222222222 2334456788999999999999999999999999999999888876543
No 160
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.73 E-value=4.5e-08 Score=96.72 Aligned_cols=152 Identities=11% Similarity=-0.030 Sum_probs=103.2
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHH
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFS 392 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~ 392 (483)
.+....+.+...+..........+.+-+ +.|++..+.++...+..+...+..+..+++.||+|.|+++.++..+..+..
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3444444455444444544444555544 689999999999998899999999999999999999999998888877777
Q ss_pred HHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 393 IFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
+...+..... .+ .-+..++..++...+ +. ..+.....+++.+|++.||++.|+....++++..+.+.+
T Consensus 115 ~~~~~a~~~~---------~~-s~~~lli~r~l~Gig-g~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 115 VWLGIAVQNP---------NT-PFGIFIVIALLCGFA-GA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHccc---------CC-CHHHHHHHHHHHHHH-HH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 6555421100 00 111122222222222 22 223345667899999999999999999999999999888
Q ss_pred hHHhh
Q psy3807 473 FPTLN 477 (483)
Q Consensus 473 ~~~l~ 477 (483)
.|.+.
T Consensus 183 ~p~~i 187 (462)
T PRK15034 183 APLVI 187 (462)
T ss_pred HHHHH
Confidence 88765
No 161
>KOG3764|consensus
Probab=98.73 E-value=3.2e-08 Score=92.55 Aligned_cols=260 Identities=13% Similarity=-0.025 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccCC----------------------------------------------------
Q psy3807 183 YSVAVSIFAIGGMLGGFSGGSIADKFGR---------------------------------------------------- 210 (483)
Q Consensus 183 ~~~~~~~~~~~~~ig~~~~g~l~dr~GR---------------------------------------------------- 210 (483)
.|++.++..+.+++..++.|.+.||+|+
T Consensus 108 iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~ 187 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADV 187 (464)
T ss_pred hhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHH
Confidence 3899999999999999999999999999
Q ss_pred -------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhccCCChHHHHHHHHHHhCCcchHHHH
Q psy3807 211 -------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDI 283 (483)
Q Consensus 211 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 283 (483)
+.++++......+|.+++|.+|.... +..|.+.+|.+.++..++-. .. .+.-++..++.
T Consensus 188 f~~d~er~~vmGialgfislG~lvgPpfGGilY--e~~Gk~aPFlVL~~v~Lld~-------~L-~l~vi~p~~~~---- 253 (464)
T KOG3764|consen 188 FPEDNERGSVMGIALGFISLGVLVGPPFGGILY--EFAGKSAPFLVLAIVLLLDG-------AL-QLLVIEPTEMD---- 253 (464)
T ss_pred cccchhhhHHHHHHHHHHhccceecCCcccchH--hhcCCcCcHHHHHHHHHHHH-------HH-HHheeCccccC----
Confidence 56667777777788888887775433 56788889988876655411 00 00000000000
Q ss_pred HHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q psy3807 284 EEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVT 363 (483)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~ 363 (483)
+++..+..++++++++|..+- ....+.++ +.+....-..++....++...+.-+.+...+..++...+
T Consensus 254 --------~~~~~~~~~~~~Ll~dP~I~~---~agai~~~-n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~i 321 (464)
T KOG3764|consen 254 --------PDSTEQGTPMWSLLMDPYILL---IAGAITFS-NSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAI 321 (464)
T ss_pred --------ccccccCccHHHHHhCchHhh---hhcchhhc-cchHHHhCcccHHHHHHhccCCCcceeeeecccccchhc
Confidence 011233446788887775432 22222222 111111111222223455663333778888889999999
Q ss_pred HHHhHHHHhhccCChHHHH--hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhcccccccccee
Q psy3807 364 MTIISIPLMDRMGRRTLHL--YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMI 441 (483)
Q Consensus 364 g~~~~~~l~dr~grr~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (483)
++.+.+.+.||++..+++. .+.+...++.....+..... ..+.....+.+..........|.....
T Consensus 322 g~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~------------~L~vp~~~l~~~i~~~dasl~P~l~~l 389 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA------------QLWVPNFGLGFGIGLADASLIPTLGYL 389 (464)
T ss_pred cCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH------------HHhhhhHHHHHHHHHHHHHHhhhhHHh
Confidence 9999999999999544433 22323222222222221111 122222222222222233333432222
Q ss_pred eccccCCC---chhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 442 TAELFSQG---PRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 442 ~~e~~p~~---~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+ +.-..+ .-|...++......++.+++|.+.+.+.+.+|
T Consensus 390 v-d~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 390 V-DPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred c-chhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 2 222233 66888999999999999999999888887765
No 162
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.73 E-value=2.4e-07 Score=94.18 Aligned_cols=160 Identities=14% Similarity=0.107 Sum_probs=101.5
Q ss_pred hhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc-cCChHH
Q psy3807 303 ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR-MGRRTL 380 (483)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grr~~ 380 (483)
+.+|+|+ .+...++..++..++. +.+..+.+.++ ++.|.+..++...............+++|++.|| +|||+.
T Consensus 15 ~~~~~p~---~~~~~~~~~~~~~~~~-y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~ 90 (500)
T PRK09584 15 NAFKQPK---AFYLIFSIELWERFGY-YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV 90 (500)
T ss_pred hhhcCCc---hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 4455442 3444445555555433 44445555555 6789988777666665555555556789999999 599999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCc--hhHHHHHH
Q psy3807 381 HLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGP--RPAAMSIA 458 (483)
Q Consensus 381 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--R~~~~g~~ 458 (483)
++.+..+.+++...+..... ......+...+...+.+. ..+....+.+|.+|++. |..+.++.
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~--------------~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~ 155 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGH--------------DAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMY 155 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcc--------------cHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHH
Confidence 99998888877666554210 011111222222222222 23445567889998653 45678888
Q ss_pred HHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 459 VLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 459 ~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+...+++..++|.+.+.+.+.+|
T Consensus 156 ~~~~~iG~~~gp~i~g~l~~~~g 178 (500)
T PRK09584 156 YMSINIGSFFSMLATPWLAAKYG 178 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999987654
No 163
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.71 E-value=1.5e-07 Score=93.05 Aligned_cols=132 Identities=12% Similarity=-0.016 Sum_probs=96.7
Q ss_pred HHHHHhHH-HHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYST-ALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
+....+.| ++.++.|.+..+.+.......+...+..++.|.++||+|||+.+..+..+..++.+.+....
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~--------- 97 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH--------- 97 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc---------
Confidence 33344444 45567899999999888888888889999999999999999999998888888776654321
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
..+...+...+.....+ ...+...++..|..|++.|+++.|+......++..+++.+.+.+.
T Consensus 98 ------~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 98 ------EPWLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred ------cHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222222221 223444566789999999999999999999999999999988876
No 164
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.70 E-value=1.6e-07 Score=92.74 Aligned_cols=132 Identities=12% Similarity=0.046 Sum_probs=94.5
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
...|.+.++.|.++.+.+.......+...++.++.+.++||+|||+.+..+.....++.+......
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-------------- 94 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH-------------- 94 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------------
Confidence 345777888999999999999999999999999999999999999999988777776665544321
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+...+...+...+.+ ...+....+..|.+|.+.|+.+.++.+....++..+++.+.+.+.+..|
T Consensus 95 -~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 160 (394)
T PRK11652 95 -SLTVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG 160 (394)
T ss_pred -cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 01111222222222211 1223344566788898999999999888888888888888877766543
No 165
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.70 E-value=6.1e-08 Score=94.32 Aligned_cols=49 Identities=18% Similarity=0.111 Sum_probs=37.9
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccc-cC-----CCCCcchhhc
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPI-LG-----TDEGWPVLLD 50 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~-~~-----~~~~Wr~~~~ 50 (483)
++.|++|+|+||++.++.+.+..+|.+++..++..+. .. .+++||.+|.
T Consensus 107 ~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 107 WRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred HHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 5789999999999999999999999999887764322 11 1345998554
No 166
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.68 E-value=1.1e-07 Score=93.35 Aligned_cols=136 Identities=13% Similarity=0.054 Sum_probs=101.9
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.......|.+.++.|.++.+.+.......++..++.++.++++||+|||+.+..+..+.+++.+.+.....
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~--------- 78 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT--------- 78 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc---------
Confidence 33445567778888999999999999999999999999999999999999999988888877766654211
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+.......+...+.+ ...+....+..|.+|++.|+++.++......++..+++.+.+.+.+..|
T Consensus 79 ------~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 143 (377)
T PRK11102 79 ------IDQLIYMRFLHGLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS 143 (377)
T ss_pred ------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1112222222222222 2234455778899999999999999999999999999999888877543
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.67 E-value=2.1e-07 Score=92.38 Aligned_cols=133 Identities=15% Similarity=0.041 Sum_probs=95.3
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
....|.+.++.|.+..+.+.......++..++.++.+.++||+|||+.++.+.....++.+.+.....
T Consensus 33 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------------ 100 (406)
T PRK15402 33 QPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQS------------ 100 (406)
T ss_pred hcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHcc------------
Confidence 33445677888999888888888899999999999999999999999999888777777665543210
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+..+...++...+.+ ...+.......|.+|++.|.++.++......++..++|.+.+.+.+..|
T Consensus 101 ---~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 101 ---IEQFTLLRFLQGIGLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred ---HHHHHHHHHHHHhHhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 1112222222222221 1234455677899999999999999988888888888888877766543
No 168
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.67 E-value=1.8e-07 Score=91.98 Aligned_cols=136 Identities=7% Similarity=-0.112 Sum_probs=100.3
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
+......+.|.+.++.|.+..+.++......++..++.++.++++||+|||+.+..+..+..++.+.+....
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~-------- 92 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV-------- 92 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 445666778889999999999999999999999999999999999999999999998888777766554421
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
..+..++..++...+.+. ..+.......+..|++.|+++.+.......++..+++.+.+.+.+.
T Consensus 93 -------~~~~l~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 93 -------GFWSWLAWRFVAGIGCAM-IWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred -------cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 112222222222222222 2232223445778888999999999999999999999998877653
No 169
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.66 E-value=9.1e-07 Score=84.07 Aligned_cols=165 Identities=18% Similarity=0.270 Sum_probs=95.2
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCC--------------CCCcchhhcccccccccccccccccc
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGT--------------DEGWPVLLDSRESDLHRSELENYTFL 67 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~--------------~~~Wr~~~~sp~~l~~~~~~~~~~f~ 67 (483)
|++++.|++++.+..++.|....+|.+++..++....... ...||. +++
T Consensus 34 ~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------~yl 96 (310)
T TIGR01272 34 YVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHT-----------------PYL 96 (310)
T ss_pred HHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHH-----------------HHH
Confidence 6778889999999999999999999999998876433111 136776 555
Q ss_pred chhHH-HHHHHHHhhccCCCCCcccHHHHHhhhccCCCchhHHHHHHHHHHhhhh-hhccccccccCchhhhhhhccccc
Q psy3807 68 PFSVM-LAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMF-QFGYNTGVINAPEKVTMLGMFQFG 145 (483)
Q Consensus 68 ~~~~~-~a~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 145 (483)
..+.+ .....++.+...||.++++.++..+....+++...++..... ..+..+ ..|.+
T Consensus 97 ~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~f~yvg~e------------------- 156 (310)
T TIGR01272 97 LLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVL-GALGIFVYVGAE------------------- 156 (310)
T ss_pred HHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHH-HHHHHHHHHHHH-------------------
Confidence 44433 233333334445654333222111110001011111111111 112222 12221
Q ss_pred cccceecCchHHHHHHHHHhhhhc--cCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhHHHH
Q psy3807 146 YNTGVINAPEKNIEKFFKDVYKER--NLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQL 219 (483)
Q Consensus 146 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~~~ 219 (483)
..+..|++.++.+. +|.+.++. +...+.+..+.++|.+++++++||+|+++.......
T Consensus 157 ----------~~~~~w~~~yl~~~~~~g~s~~~a------~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~ 216 (310)
T TIGR01272 157 ----------VSAGSFLVNFLSDPHALGLPEDQA------AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAF 216 (310)
T ss_pred ----------HHHHHHHHHHHHhcccCCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 12346788888643 46554444 788899999999999999999999998776554433
No 170
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.66 E-value=2.9e-06 Score=84.94 Aligned_cols=117 Identities=15% Similarity=0.029 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHhhccCC--hH-----HHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHH
Q psy3807 350 AKFTTIGIGAVMVTMTIISIPLMDRMGR--RT-----LHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVIS 422 (483)
Q Consensus 350 ~~~~~~~~~~~~~~g~~~~~~l~dr~gr--r~-----~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (483)
..+...+..+.-++.+++.+++=.|..| |. =.-+|+++++++.+.+.+.....+ ++. ....++ ++.
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~-----~~~-~~s~~w-l~~ 382 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSA-----MYG-HSSLPL-MVL 382 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCC-CcCHHH-HHH
Confidence 3445556666666666666655555522 21 145667777777766655432221 001 112222 223
Q ss_pred HHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHH-HHHHHHHHHHh
Q psy3807 423 ILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVN-WIANFVVGLGF 473 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~-~~~~~~~~~~~ 473 (483)
..++.........|+....++++.|++.|+..+|+..... .+++.++..+.
T Consensus 383 ~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~ 434 (493)
T PRK15462 383 GLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIA 434 (493)
T ss_pred HHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344555677888899999999999999999986643 46655555443
No 171
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.66 E-value=7.1e-08 Score=94.37 Aligned_cols=133 Identities=14% Similarity=-0.006 Sum_probs=100.1
Q ss_pred HHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 329 INAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
...+....|.+.++.|.+..+.+.......++..++.++.++++||+|||+.+..+..+..++.+++.....
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 82 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS-------- 82 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh--------
Confidence 345566678888889999999999999999999999999999999999999999998888877776654321
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHH-HhHHhh
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGL-GFPTLN 477 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~-~~~~l~ 477 (483)
.+..++...+...+.+ ...+....+.+|.+|++.|+++.++.+....++..+++. ....+.
T Consensus 83 -------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 144 (379)
T TIGR00881 83 -------LWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA 144 (379)
T ss_pred -------HHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH
Confidence 1222222222222222 234556678899999999999999999999999999883 444443
No 172
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.65 E-value=1.8e-07 Score=94.24 Aligned_cols=124 Identities=16% Similarity=0.049 Sum_probs=87.0
Q ss_pred HHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 332 VFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 332 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
+....|++.++ |.+..+.+.......++..++.++.|+++||+|||++++.+.++.+++.+.+.+.....
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~--------- 117 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT--------- 117 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccc---------
Confidence 34566777777 99999999999999999999999999999999999999998888877776665431100
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHH
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFV 468 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~ 468 (483)
...+..++...+...+.+... +.......|.+|++.|+++.|+.+....+++.+
T Consensus 118 --~~~~~~~~~~~l~gi~~g~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 171 (452)
T PRK11273 118 --SSIAVMFVLLFLCGWFQGMGW-PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGL 171 (452)
T ss_pred --ccHHHHHHHHHHHHHHHhccc-hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhH
Confidence 011122222223333333332 222345678999999999999988888877543
No 173
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.65 E-value=2.4e-07 Score=92.04 Aligned_cols=128 Identities=15% Similarity=0.027 Sum_probs=94.4
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHH
Q psy3807 337 TALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMS 416 (483)
Q Consensus 337 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (483)
|.+.++.+.+..+.........++..++.++.+.++||+|||+.++.+..+.+++.+...... ..
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---------------~~ 104 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT---------------SM 104 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC---------------CH
Confidence 455567888888888888888999999999999999999999999988877777666554421 11
Q ss_pred HHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 417 YLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
+..++..++...+.+ ...+..+.+..|.+|++.|++++++.+....++..+++.+.+.+.+..
T Consensus 105 ~~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 105 TQFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 122222222222222 123345577889999999999999999999999999999888777654
No 174
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.65 E-value=1.9e-07 Score=91.03 Aligned_cols=137 Identities=12% Similarity=-0.069 Sum_probs=94.1
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
.+..+....|.+.++.|.+..+.++......++..++.+..|++.||+|||+++.........+. ..... .
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~---~----- 76 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLD---P----- 76 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHH---h-----
Confidence 34555667788889999999999999888999999999999999999999987654433332221 11110 0
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+ .-...++.-++...+.+ .........+|.+|++.|++++++......++..+++.+.+.+.+.+|
T Consensus 77 -----~-~~~~l~~~R~l~G~g~~--~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g 142 (368)
T TIGR00903 77 -----F-NYEWLLACQLLAALGQP--FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG 142 (368)
T ss_pred -----c-cHHHHHHHHHHHHhHhH--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 0 11122222222222222 222233445899999999999999999999999999999888876543
No 175
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.64 E-value=2.8e-07 Score=92.79 Aligned_cols=134 Identities=16% Similarity=0.002 Sum_probs=96.0
Q ss_pred HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
.+..+.|.+.++.|.+..+.++......+...++.++.++++||+|||+.++.+..+..++.+.++....
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---------- 106 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---------- 106 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh----------
Confidence 3455678888889999888888888888888899999999999999999999888777776665544211
Q ss_pred hhhhHHHHHHHHH-HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 411 MIDWMSYLSVISI-LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 411 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+...... .+...+.+... +....++.|.+| +.|+++.|+.+....++..+++.+.+.+.+.+|
T Consensus 107 -----~~~l~~~~~~l~G~~~~~~~-~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 107 -----VIELYLTAGFITGLGLAFNF-QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred -----HHHHHHHHHHHHHhcchhhh-hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 11111111 12222222222 223456678886 789999999999999999999998888877654
No 176
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.64 E-value=3.1e-07 Score=90.65 Aligned_cols=128 Identities=10% Similarity=0.019 Sum_probs=96.8
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
....+.+.++.+.+..+.++......+...+..++.|+++||+|||++++++..+..++.+.+... .
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~---~---------- 89 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG---I---------- 89 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH---H----------
Confidence 344455567788888788888888899999999999999999999999999988877766554331 1
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.. ++..+ ..........|...++..|.+|++.|+++.|+.+....++..++|.+.+.+.+.
T Consensus 90 ---~~--~~~r~-l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 90 ---HP--LLAYG-LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred ---HH--HHHHH-HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 11111 222223334566678889999999999999999999999999999998887763
No 177
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.63 E-value=1.6e-07 Score=94.10 Aligned_cols=133 Identities=16% Similarity=-0.012 Sum_probs=92.5
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
....|++.+ .|.++.+.++......++..++.++.++++||+|||+.+..+.++.+++.+.+......
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----------- 114 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----------- 114 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc-----------
Confidence 445566655 59999999999999999999999999999999999999988877777776654432100
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
........+...+...+.+... +.......|.+|++.|++++++.++...+++.+++.+.+...+
T Consensus 115 ~~~~~~l~~~~~l~g~~~g~~~-~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 115 TSSIAIMFVLLFLNGWFQGMGW-PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred cchHHHHHHHHHHHHHHhhcch-HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 0011111222222233333322 2234566799999999999999999999998888877665443
No 178
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.63 E-value=3.6e-07 Score=93.06 Aligned_cols=138 Identities=15% Similarity=-0.004 Sum_probs=102.1
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
....+..-.|.+.++.|.+..+..+....+.++...+.+..|+++||+|||+.++.+..+..++.+.++...
T Consensus 21 d~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~-------- 92 (495)
T PRK14995 21 DATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP-------- 92 (495)
T ss_pred HHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 335566667888899999888888998889999999999999999999999999999988888887766531
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++.-.+...+.+. ..+.......+.+ |++.|+++.|+......++..++|.+.+.+.+.+|
T Consensus 93 -------~~~~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 93 -------TASWLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred -------CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 112222222222222222 2233333344544 78999999999999999999999999999887654
No 179
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.61 E-value=6.5e-07 Score=88.73 Aligned_cols=134 Identities=10% Similarity=-0.037 Sum_probs=98.8
Q ss_pred HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
......|.+.++.|.+..+.+.......++..++++..+++.||+|||+.+..+..+++++.+.+.......
T Consensus 21 ~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~-------- 92 (410)
T TIGR00885 21 ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIM-------- 92 (410)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhc--------
Confidence 334566888888999999999999999999999999999999999999999999988888876653321110
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
.-+..+...++...+.+.. .+....+..|..|++.|++..++.+....++..+++.+.+.+.
T Consensus 93 ----~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 93 ----NYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred ----cHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111222222222222221 2223456678889999999999999999999999999988775
No 180
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.60 E-value=4.2e-07 Score=89.38 Aligned_cols=135 Identities=16% Similarity=0.002 Sum_probs=98.3
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.......|.+.++.|.+..+.++......++..++.++.+++.||+|||+.+..+..+.+++.+.......
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~--------- 90 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSS--------- 90 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCc---------
Confidence 34455668888889999989999999999999999999999999999999999988888877766554211
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
.+...+...+...+.+. ..+....+..|.+|++.|+++.++......++..+++.+...+.+..
T Consensus 91 ------~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 91 ------YLMLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred ------HHHHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 11222222222222221 12334456789999999999999998888888888887776665543
No 181
>PRK10133 L-fucose transporter; Provisional
Probab=98.60 E-value=7.1e-07 Score=89.26 Aligned_cols=135 Identities=10% Similarity=-0.056 Sum_probs=97.6
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
.....+.|.+.++.|.++.+.+.......++..++.++.+.++||+|||+++..+..+.+++.+++......+
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~------- 115 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM------- 115 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 5566778888888999999999999999999999999999999999999999999988888876653211111
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
..+..++..++...+.+.. .+....+..|..|.+.|...+++......++..+++.+.+.+.
T Consensus 116 -----~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 116 -----NYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -----CHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222223333333322 2333455668777777777899999999999999988866543
No 182
>PTZ00207 hypothetical protein; Provisional
Probab=98.60 E-value=2.6e-06 Score=86.81 Aligned_cols=134 Identities=9% Similarity=0.036 Sum_probs=78.4
Q ss_pred HHHHHhHHHHHhhc-CCCCcc--hhHHHHHHHHHHHHHHHhHHHHhhccCCh--------HHHHhhhHHHHHHHHHHHHH
Q psy3807 330 NAVFYYSTALFESS-GLSEKT--AKFTTIGIGAVMVTMTIISIPLMDRMGRR--------TLHLYGLGGMFIFSIFITIS 398 (483)
Q Consensus 330 ~~~~~~~~~~~~~~-g~s~~~--~~~~~~~~~~~~~~g~~~~~~l~dr~grr--------~~l~~~~~~~~i~~~~~~~~ 398 (483)
..+.+..-++.+.+ |.+.++ ......+.++.+.+|.+..|++....-|| +..+....++.++.+++...
T Consensus 370 l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~ 449 (591)
T PTZ00207 370 FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT 449 (591)
T ss_pred heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 45556677888888 763333 22256777888888888888877222221 22222222244444433332
Q ss_pred HHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHH-HHHhHHhh
Q psy3807 399 LLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVV-GLGFPTLN 477 (483)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~-~~~~~~l~ 477 (483)
. +. ....+..++...+++..+ ++....++|+|- +.-|+-..+.....-+++++. ..+++.++
T Consensus 450 ~-------------p~--~~L~~~~~lvg~~~G~~~-~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Y 512 (591)
T PTZ00207 450 L-------------PK--AALPLPYFIAAFANGFMA-ATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWY 512 (591)
T ss_pred C-------------Cc--cHhHHHHHHHHHHhhHhH-HHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 1 10 122333333344444444 445577899999 877888888888888888777 56778887
Q ss_pred hhc
Q psy3807 478 LPY 480 (483)
Q Consensus 478 ~~~ 480 (483)
|.-
T Consensus 513 d~e 515 (591)
T PTZ00207 513 TQQ 515 (591)
T ss_pred HHH
Confidence 753
No 183
>PRK11043 putative transporter; Provisional
Probab=98.59 E-value=6.9e-07 Score=88.49 Aligned_cols=129 Identities=13% Similarity=-0.005 Sum_probs=92.7
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHH
Q psy3807 337 TALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMS 416 (483)
Q Consensus 337 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (483)
|.+.++.|.++.+.+.......++..++.++.++++||+|||+.+..+..+..++.+...... ..
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------------~~ 94 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE---------------SA 94 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc---------------CH
Confidence 445677899999999999999999999999999999999999999888777776665554321 01
Q ss_pred HHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 417 YLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+...+...+...+.+ ...+....+..|.+|.+.|+...+.......++..+++.+.+.+.+.+|
T Consensus 95 ~~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 95 AQLLVLRFVQAVGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred HHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 112222222111111 1122334567899999999999999888888899999998888877654
No 184
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.57 E-value=7e-07 Score=88.15 Aligned_cols=133 Identities=15% Similarity=-0.047 Sum_probs=101.0
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
..+....|.+.++.|.+..+.++......++..++.++.+++.||+|||+++..+..+.+++.+..+.....
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~-------- 97 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQS-------- 97 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcch--------
Confidence 344566788889999999999999999999999999999999999999999999999999988877753211
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
+..++...+...+.+. ..+....++.|.+| +.|+.++++.......+..+++.+.|.+.+.
T Consensus 98 -------~~ll~~r~l~Gig~~~-~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 98 -------ALLLSSALLGGVGIGI-IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred -------HHHHHHHHHHHhHHHH-HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122222222222222 22333456678887 7799999999999999999999998887764
No 185
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.56 E-value=4.2e-06 Score=82.57 Aligned_cols=46 Identities=13% Similarity=-0.060 Sum_probs=32.5
Q ss_pred cccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhhc
Q psy3807 3 ISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLD 50 (483)
Q Consensus 3 i~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~ 50 (483)
..|..++++|+...+....+..+|.+++..... ...+..|||.+|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~--~l~~~~gw~~~f~ 167 (390)
T TIGR02718 122 AAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTL--VLFGKFGQRPAFL 167 (390)
T ss_pred HHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCHHHHHH
Confidence 457778888888888888888888888875432 1234568998553
No 186
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.55 E-value=2.1e-07 Score=94.20 Aligned_cols=114 Identities=13% Similarity=-0.055 Sum_probs=84.4
Q ss_pred CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHH
Q psy3807 347 EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGF 426 (483)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
..+.++......++..++.++.++++||+|||+.++++..+..++.++....... ...+..++..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~ 137 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFA------------LSVEMLIVGRVLL 137 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc------------cchHHHHHHHHHH
Confidence 6788888899999999999999999999999999998888877776666442111 0111222222222
Q ss_pred HHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 427 VVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
..+.+ ...+....+++|.+|++.|+++.++.+....++.++++.+.
T Consensus 138 G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 138 GIGVG-IASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred Hhhhh-HHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 22222 22344567889999999999999999999999999998887
No 187
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.51 E-value=4.8e-07 Score=88.40 Aligned_cols=132 Identities=11% Similarity=-0.036 Sum_probs=92.2
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
+......|.+.++.|.+..+.+.......++..++.++.|.++||+|||+.+..+..+.+++.+.......
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~--------- 90 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS--------- 90 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH---------
Confidence 44556778888899999999999999999999999999999999999999999988888887766554321
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.+...+...+...+.+... +.......|.+| +.|+++.++......++..+.+.+.+.+.+
T Consensus 91 ------~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 151 (377)
T TIGR00890 91 ------LAALYLTYGLASAGVGIAY-GIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN 151 (377)
T ss_pred ------HHHHHHHHHHHhHHHHHHH-HhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh
Confidence 1112222222222222111 222344567777 569999999988888887766555554443
No 188
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.50 E-value=2.3e-06 Score=83.53 Aligned_cols=281 Identities=11% Similarity=0.047 Sum_probs=145.0
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-----------------------------
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR----------------------------- 210 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR----------------------------- 210 (483)
.+..+++.+++|++.++.. +.+.+++..++++..+++|+++||+|-
T Consensus 46 s~a~p~L~~elglT~~qv~-----G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVT-----NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred HHHHHHHHHHcCCCHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888888877622 799999999999999999999999997
Q ss_pred ----------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHH---------HHH
Q psy3807 211 ----------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAML---------GMF 253 (483)
Q Consensus 211 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~---------~i~ 253 (483)
++..+..+.+..+|.+++++++.. . ...+||....+. +.+
T Consensus 121 ~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l--~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 121 MEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-L--VTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--HhcCchhHHHHHHHHHHHHHHHHH
Confidence 778888889999999999887654 2 346888765444 111
Q ss_pred HHHhccCCChH------HHHH--HHHHHhCCcchHH-HHHH-HHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHh
Q psy3807 254 QFGYNTGVINA------PEKV--TLRKLRASTQIEV-DIEE-MRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLS 323 (483)
Q Consensus 254 ~~~~~~~~~~~------~~~~--~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (483)
..+++.+.++. ++.+ ...+.....+.+. +.++ .+......-..-....++..+++...+ .-+|..
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~-----WSlWwa 272 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLL-----WSLWWV 272 (511)
T ss_pred HHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhh-----hhHHHH
Confidence 11222211110 0000 0000000000000 0000 000000000000112334455554332 334445
Q ss_pred hhcchHHHHHHhHHHHHhhcCCC-CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhH--HHHHHHHHHHHHHH
Q psy3807 324 QQFSGINAVFYYSTALFESSGLS-EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLG--GMFIFSIFITISLL 400 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~--~~~i~~~~~~~~~~ 400 (483)
...+|++-+.+|.-.+.++..-+ +.-.+..-.+..+.+.+.++..|++-.+..|--.+.++.. +.+.+.+++..
T Consensus 273 ~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~--- 349 (511)
T TIGR00806 273 FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ--- 349 (511)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc---
Confidence 55568888888888887776332 2244555566666777778888887554433222322222 11111111111
Q ss_pred HHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHH
Q psy3807 401 IKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVV 469 (483)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~ 469 (483)
....|.+.+...++...+.+.. ++...-+++....+.-|...|+.+++.-+...+.
T Consensus 350 ------------t~~Iw~~Y~~yvlf~~~y~fli-tia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtil 405 (511)
T TIGR00806 350 ------------SHDIWVLYVTYVLFRGIYQFLV-PIATFQIASSLSKELCALVFGINTFVATALKTII 405 (511)
T ss_pred ------------ccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccceEEEEecHHHHHHHHHHhe
Confidence 1123444444444444444322 2222333344445555666666666655554443
No 189
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.50 E-value=2.1e-06 Score=83.91 Aligned_cols=146 Identities=9% Similarity=0.002 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcc-hhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHH
Q psy3807 312 KPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKT-AKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFI 390 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i 390 (483)
+..++.|+..++..+ =....+-.|++.++.|++..+ .+.+.........+..+.++++.||+|-|+++.++.+.-++
T Consensus 27 ~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 27 VLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 344445555555443 234455678888899999998 88999999999999999999999999999999988888877
Q ss_pred HHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHH
Q psy3807 391 FSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVG 470 (483)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~ 470 (483)
..++.++... .....+.-+++..+-+..+ ..+.++...+|++.|++++|+.++...+|.++++
T Consensus 105 ~t~L~~fa~S---------------l~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~ 167 (511)
T TIGR00806 105 VWLLLLLGTS---------------VWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSS 167 (511)
T ss_pred HHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777765421 1223333344444433333 4567788999999999999999999999999999
Q ss_pred HHhHHh
Q psy3807 471 LGFPTL 476 (483)
Q Consensus 471 ~~~~~l 476 (483)
.+.+.+
T Consensus 168 ~L~qll 173 (511)
T TIGR00806 168 VLGQLL 173 (511)
T ss_pred HHHHHH
Confidence 998883
No 190
>KOG2615|consensus
Probab=98.45 E-value=4.6e-07 Score=84.49 Aligned_cols=116 Identities=19% Similarity=0.118 Sum_probs=88.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 346 SEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 346 s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
+..-++......++.+++.+...|.++||+|||+++++|.+..++...+.+... +. ..+...-
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~----------------~F-~afv~aR 128 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR----------------NF-AAFVLAR 128 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH----------------HH-HHHHHHH
Confidence 344567788888999999999999999999999999999888888666555431 11 1222212
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+..+..-+.-++.-++++|+++.+.|+.+++.......+|-+++|.+.+++..
T Consensus 129 ~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 129 FLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 23333333334566899999999999999999999999999999999888765
No 191
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.44 E-value=2.6e-06 Score=96.20 Aligned_cols=131 Identities=11% Similarity=-0.005 Sum_probs=88.5
Q ss_pred HHHHHhhcCCCCcc--hhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 336 STALFESSGLSEKT--AKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 336 ~~~~~~~~g~s~~~--~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
.+.+....+.+... .++......+..+++++++|+++||+|||++++++..+.++..++..+.....
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~----------- 101 (1146)
T PRK08633 33 QNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG----------- 101 (1146)
T ss_pred HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 34444444444322 35556667778889999999999999999999888766555554444332111
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
..+..++..++.. .......+...++++|.+|.+.|++++|+......++.++++.+.+.+.+.
T Consensus 102 -~~~~l~~~r~l~G-~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 102 -WFWLAFAVTFLLG-AQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred -cHHHHHHHHHHHH-HHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122222222222 222234455667899999999999999999999999999999998888765
No 192
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.44 E-value=8.7e-07 Score=73.06 Aligned_cols=110 Identities=15% Similarity=0.024 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccc
Q psy3807 356 GIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPG 435 (483)
Q Consensus 356 ~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (483)
...++.+++.++.+++.||+|||+.+..+.....++.+.+.... ..+.......+...+.+ ...
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~-~~~ 69 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS---------------NITVLIIARFLQGFGAA-FAL 69 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHHHHHHHHH-HHH
Confidence 34677888999999999999999999888777776665544321 11122222222222222 233
Q ss_pred cccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 436 SIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 436 ~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+....+..|.+|++.|+++.++.+....++..+++.+.+.+.+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 115 (141)
T TIGR00880 70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG 115 (141)
T ss_pred HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc
Confidence 4566778999999999999999999999999999999998876543
No 193
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.42 E-value=9.5e-07 Score=85.93 Aligned_cols=135 Identities=11% Similarity=-0.076 Sum_probs=95.0
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
++.......|.+.++.|.+..+.++......++..++.++.+++.||+|||+.+..+..+.+++.+.. .. +
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~---~----- 85 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA---P----- 85 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh---c-----
Confidence 33444566788889999999999999999999999999999999999999999988876666554433 11 1
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
..+..++..++...+.+.. .+....++.|.+| +.|+++.++.+....++..+++.+.+.+.+..
T Consensus 86 -------~~~~l~~~~~~~g~g~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 86 -------GTALLFAGTALIGVGIAII-NVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred -------cHHHHHHHHHHHHHHHHHH-hccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1112222222222222221 2223345678776 57999999999999999999988888776543
No 194
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.41 E-value=1.8e-06 Score=87.54 Aligned_cols=164 Identities=13% Similarity=0.044 Sum_probs=110.0
Q ss_pred hhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHH
Q psy3807 303 ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~ 382 (483)
.-+|+|++++......+..+. ......-.+.+..+..-|+....+......+-.++.++++|.++||++||++++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG-----~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLG-----DWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred ccccCchHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 447788777644333333322 122222223334444556667777777778888899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHH
Q psy3807 383 YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVN 462 (483)
Q Consensus 383 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~ 462 (483)
.+-.+..+..+.+.+..... ....+. +..+.+...+.+.-..|...+.+.|+.|.+....+.++.+...
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~----------~~~~~~-Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~ 148 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFG----------LLSPWL-LLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISF 148 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhC----------cCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHH
Confidence 98887776666555543322 011222 2222223333333345667788899999999999999999999
Q ss_pred HHHHHHHHHHhHHhhhhcCC
Q psy3807 463 WIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 463 ~~~~~~~~~~~~~l~~~~g~ 482 (483)
++...++|.+.+.++..+|+
T Consensus 149 niar~iGPalgG~Lva~~G~ 168 (524)
T PF05977_consen 149 NIARIIGPALGGILVAFFGA 168 (524)
T ss_pred HHHHhccchHHHHHHHHHHH
Confidence 99999999999998877664
No 195
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.38 E-value=3.5e-06 Score=82.48 Aligned_cols=133 Identities=14% Similarity=-0.004 Sum_probs=84.5
Q ss_pred HHhHHH-HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHh-hhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 333 FYYSTA-LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLY-GLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 333 ~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
....|. +.++.|.+..+.+.......+...+..++.+.++||+|||+.++. +.....++.+......
T Consensus 17 ~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~----------- 85 (375)
T TIGR00899 17 FPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR----------- 85 (375)
T ss_pred hhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 333444 446789999899998888888999999999999999999887654 3333333333333210
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHH--HHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAA--MSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~--~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++...+ .........|....+..|..|++.|+.+ .+.......++..+++.+.+.+.+.+|
T Consensus 86 ----~~~~l~~~~~~-~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~ 153 (375)
T TIGR00899 86 ----NYFLLLVLGVL-LSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG 153 (375)
T ss_pred ----hHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc
Confidence 01111111111 2222222345555667788887777654 577777778888888888887776543
No 196
>TIGR00898 2A0119 cation transport protein.
Probab=98.38 E-value=1e-06 Score=90.18 Aligned_cols=125 Identities=13% Similarity=0.063 Sum_probs=90.7
Q ss_pred hHHHHHhhcCCC---CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 335 YSTALFESSGLS---EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 335 ~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
+.|.+.++.+++ ..+.++......++.+++.++.|+++||+|||+.++++.++..++.+...+..
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~------------ 178 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP------------ 178 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc------------
Confidence 345566677877 66778888899999999999999999999999999998888777766655421
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHH
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPT 475 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 475 (483)
....+....++......+..+....++.|.+|++.|+.+.++......++.++++.+...
T Consensus 179 ----~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 238 (505)
T TIGR00898 179 ----NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYF 238 (505)
T ss_pred ----cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222222222233356677889999999999999999988888887777766443
No 197
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.37 E-value=5.7e-06 Score=82.49 Aligned_cols=161 Identities=16% Similarity=0.044 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhh----ccCChHHHHhh-hHH
Q psy3807 313 PLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMD----RMGRRTLHLYG-LGG 387 (483)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~d----r~grr~~l~~~-~~~ 387 (483)
+++..+...+..|++ +.....+.+.++++.|.+............+..++..++.|+++| |+|||+.++.+ ...
T Consensus 5 ~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 344445555556654 455556666678889999999999999999999999999999999 59999988764 445
Q ss_pred HHHHHHHHHHHHHHHhhhccc--hhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCch--hHHHHHHHHHHH
Q psy3807 388 MFIFSIFITISLLIKEFFGFV--QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPR--PAAMSIAVLVNW 463 (483)
Q Consensus 388 ~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R--~~~~g~~~~~~~ 463 (483)
..++..++............. +....+..+..++.+.+.-...+....| ..++.+|+.|++.| +.+.++.+....
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 555544444322111000000 0000111112222222333333333334 35788999998876 578888888888
Q ss_pred HHHHHHHHHhHH
Q psy3807 464 IANFVVGLGFPT 475 (483)
Q Consensus 464 ~~~~~~~~~~~~ 475 (483)
+|+++++.+...
T Consensus 163 lG~ilg~~~g~~ 174 (477)
T TIGR01301 163 IGNVLGYAAGAY 174 (477)
T ss_pred HHHHHHHHHHHH
Confidence 988888876544
No 198
>KOG0253|consensus
Probab=98.34 E-value=1.3e-06 Score=81.12 Aligned_cols=65 Identities=22% Similarity=0.226 Sum_probs=53.9
Q ss_pred ccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhh------------------cccccccccccccccc
Q psy3807 4 SEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLL------------------DSRESDLHRSELENYT 65 (483)
Q Consensus 4 ~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~------------------~sp~~l~~~~~~~~~~ 65 (483)
.|.-|..+|+..+-.. ..+.+|.+.+..+.+.. ....|||+.. ||||+++.+|+.++
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~ea~law~v--m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k-- 265 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV--MSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYK-- 265 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHH--
Confidence 4888999999988888 99999999998887653 3455777754 99999999999999
Q ss_pred ccchhHHHHHHHHHhh
Q psy3807 66 FLPFSVMLAVFWLFTY 81 (483)
Q Consensus 66 f~~~~~~~a~~~~~~~ 81 (483)
|+..+.+.
T Consensus 266 --------AletL~ki 273 (528)
T KOG0253|consen 266 --------ALETLHKI 273 (528)
T ss_pred --------HHHHHHHH
Confidence 88887653
No 199
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.34 E-value=1e-05 Score=80.59 Aligned_cols=136 Identities=10% Similarity=0.012 Sum_probs=80.2
Q ss_pred HHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 330 NAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 330 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
.....+.|.++++ .|++..+.+.......+...++.++.|+++||+|||+.++++..+.+++...........
T Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~------ 100 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAP------ 100 (420)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 3444455555554 899999999999999999999999999999999999998876555444332221111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccc---cccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPG---SIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
..... ............+.+.. +....+. |.. .+.++...|.....+.++..+++.+.+.+.+
T Consensus 101 ----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 166 (420)
T PRK09528 101 ----LLQYN-ILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIAGILFN 166 (420)
T ss_pred ----HHHHH-HHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHHHHHHh
Confidence 00000 00001111111111111 1111221 112 2345667788888889999999998888765
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.33 E-value=6.4e-06 Score=92.87 Aligned_cols=119 Identities=9% Similarity=-0.014 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHH
Q psy3807 350 AKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVF 429 (483)
Q Consensus 350 ~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (483)
..+......+..++.++++|+++||+|||+++.....+..+............ ..+..++ ..+....
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~------------s~~~l~~-~~~l~gi 120 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN------------SVPLLFA-ALFLMGI 120 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh------------hHHHHHH-HHHHHHH
Confidence 44455566777889999999999999999976432222222221111111101 1122222 2233333
Q ss_pred hccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 430 FAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 430 ~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
......|...+++.|.+|.+.|+.++|+.++...++.+++|.+.+.+.+..|
T Consensus 121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~ 172 (1140)
T PRK06814 121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN 172 (1140)
T ss_pred HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3334556777889999999999999999999999999999999999887654
No 201
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.32 E-value=2.2e-06 Score=89.44 Aligned_cols=169 Identities=10% Similarity=-0.050 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHH
Q psy3807 312 KPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIF 391 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~ 391 (483)
+.+++...+..+.+.........-.+.+-++.+++..+.+++.....++..++.++.+++.||.|||+++.++.++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 32 KVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 33434444344444333333444456666778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccc-------------------h--h-------------hhh-hHHHHHHHHHHHHHHHhcccccc
Q psy3807 392 SIFITISLLIKEFFGFV-------------------Q--E-------------MID-WMSYLSVISILGFVVFFAVGPGS 436 (483)
Q Consensus 392 ~~~~~~~~~~~~~~~~~-------------------~--~-------------~~~-~~~~~~~~~~~~~~~~~~~~~~~ 436 (483)
.+++++..+..+.+... + + ... ...+..++..-++.........+
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 98887654322111000 0 0 000 00122222222222222233446
Q ss_pred ccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 437 IPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 437 ~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
+...++.|.+|++.|+...|+......++..+++.+.+.+.+.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 66789999999999999999999999999999999888877543
No 202
>PTZ00207 hypothetical protein; Provisional
Probab=98.27 E-value=1.2e-05 Score=82.11 Aligned_cols=135 Identities=10% Similarity=0.014 Sum_probs=86.4
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
+.+..+.|.+.++.|++..+.+...... .......++.|++.||+|||++++++.+...++.+.+++.....
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~------- 115 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV------- 115 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 4556778888888999988777666542 33334566789999999999999999999999888777642100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
.....+...+..++...+.+. ..+.....+.+.|| +.||++.|+......+++.+.+.+...+
T Consensus 116 --i~~s~~~l~l~r~l~G~G~~~-~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 116 --IEGSVVRLSVYNGLMTLGCML-FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred --ccCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111222222222222111 12223345678887 7799999999999999997644444433
No 203
>KOG0255|consensus
Probab=98.27 E-value=4e-06 Score=86.07 Aligned_cols=121 Identities=20% Similarity=0.233 Sum_probs=94.7
Q ss_pred hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 342 SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 342 ~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
....+.........+..++..+|+++.|.++||+|||++++.+..+..++.+..++.. ++....
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~----------------~~~~~~ 175 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP----------------NYWMFL 175 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC----------------cHHHHH
Confidence 3445556677788888999999999999999999999999999999988886665532 222333
Q ss_pred HHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 422 SILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.+-++..++..+...+.+.+.+|+.+++.|+.+..+ ....+.++.+++....++...
T Consensus 176 ~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 232 (521)
T KOG0255|consen 176 IFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD 232 (521)
T ss_pred HHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 344444455555667778899999999999999999 888899988888888777653
No 204
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.20 E-value=2.9e-07 Score=93.45 Aligned_cols=174 Identities=11% Similarity=0.054 Sum_probs=0.0
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccC-
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMG- 376 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~g- 376 (483)
..+++++||.+.- ..+...........+..|.|.++| +.+.++.++........+ +..+|.+++|++++|++
T Consensus 297 ~l~~Ll~Np~f~~-----~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl 371 (539)
T PF03137_consen 297 ALKRLLTNPVFMC-----LILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKL 371 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcChHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecC
Confidence 4566676665433 222222333345666777888776 468887777666544444 67789999999999974
Q ss_pred -ChHHHHhhhHHHHHHHHHHHHHH---HH-Hhhhcc----------ch--------------------hh---hh-hHHH
Q psy3807 377 -RRTLHLYGLGGMFIFSIFITISL---LI-KEFFGF----------VQ--------------------EM---ID-WMSY 417 (483)
Q Consensus 377 -rr~~l~~~~~~~~i~~~~~~~~~---~~-~~~~~~----------~~--------------------~~---~~-~~~~ 417 (483)
.|+.+.+..+...++.+...... .. ....+. .. .. .+ ....
T Consensus 372 ~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~ 451 (539)
T PF03137_consen 372 SARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKL 451 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCccccccc
Confidence 45555544444444333311111 00 000000 00 00 00 1111
Q ss_pred -HHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHH-HHHHHHHHhHHhhhh
Q psy3807 418 -LSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWI-ANFVVGLGFPTLNLP 479 (483)
Q Consensus 418 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~ 479 (483)
..++..++..+..+.+..|.. ..+-...|++.|+.|.|+...+.++ +.+-+|.+++.++|.
T Consensus 452 ~~Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 452 IPFLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 112222222222233333333 4455888999999999999988877 568899999999886
No 205
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.17 E-value=1.5e-05 Score=81.00 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=80.3
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhH
Q psy3807 336 STALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWM 415 (483)
Q Consensus 336 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (483)
.+++.++.|-++. ..+......+...++.++.|.++|.+|||..++.+.++.+++.++.+-.....
T Consensus 67 l~~I~~diG~~~~-~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~------------- 132 (599)
T PF06609_consen 67 LPYINADIGGSDN-WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN------------- 132 (599)
T ss_pred HHHHHHhcCCCcc-chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH-------------
Confidence 4667778887654 44566667888999999999999999999999999999999988776532211
Q ss_pred HHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 416 SYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
..+....+... +.|...+....++|+.|.|.|..+.++.....-.....++.+
T Consensus 133 --~~iag~~l~Gv--gaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 133 --TFIAGMVLYGV--GAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred --HHHHHHHHHHH--hhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 12222222222 334444455668999999999888776654433333333333
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.16 E-value=5.5e-06 Score=80.60 Aligned_cols=162 Identities=17% Similarity=0.104 Sum_probs=110.5
Q ss_pred hhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcC----CCCcchhHHHHHHHHHHHHHHHhHHHHhhcc-CC
Q psy3807 303 ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSG----LSEKTAKFTTIGIGAVMVTMTIISIPLMDRM-GR 377 (483)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-gr 377 (483)
..+++| |.+...+..-+..-++.+..-....-|+..+.+ +++.++......++..--...+++||++||+ |+
T Consensus 15 ~~f~~P---r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~ 91 (498)
T COG3104 15 KFFGQP---RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT 91 (498)
T ss_pred ccCCCC---chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 345544 345566666777666554433333333334445 8888888888888777888899999999995 99
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCC--chhHHH
Q psy3807 378 RTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQG--PRPAAM 455 (483)
Q Consensus 378 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~R~~~~ 455 (483)
|+.+.+|.+++.++.++++.... .......+.+.+.. .-+...=+....+.+|.+|++ .|..+.
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~~-------------~~~~gl~i~L~~I~-iG~Gl~K~NiS~llg~ly~~~DprrD~gF 157 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISSV-------------SGPGGLYIGLALII-VGTGLFKPNISSLLGELYPKDDPRRDGGF 157 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhcccc-------------ccccHHHHHHHHHH-hccccccccHHHHHHHhcCCCCcccCCCc
Confidence 99999999999999998886420 00111222222222 222223455667888998632 378888
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 456 SIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 456 g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
++..+..++|++++|.+.|++.+.+|
T Consensus 158 t~fY~~iNiGsl~~p~i~~~~~~~~g 183 (498)
T COG3104 158 TLFYMGINIGSLIAPIITGLLAINYG 183 (498)
T ss_pred cEEEEEeehHHHHHHHHHHHHHHhhC
Confidence 88888999999999999999988765
No 207
>KOG2533|consensus
Probab=98.16 E-value=3.4e-06 Score=84.28 Aligned_cols=156 Identities=14% Similarity=0.179 Sum_probs=90.5
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhcccccc----CCCCCcchhhccccccccccccccccccchhHHHHHHH
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPIL----GTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFW 77 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~----~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~ 77 (483)
|++-|..+++||+..++......+|.+++.++++++.. ....|||+ .|+..|++.....
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~-----------------~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRW-----------------LFIIEGVITLVLG 220 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCcee-----------------ehhHHHHHHHHHH
Confidence 56778999999999999999999999999888877432 24569998 5555565555555
Q ss_pred HHhhccCCCCCc---c-cHHH-------HHhhhccC--CCchhHHHH------HHHHHHhhhhhhccccccccCchhhhh
Q psy3807 78 LFTYKKVPETKN---K-TFEE-------IVALFRTD--DGLTFHLTY------TILSAMLGMFQFGYNTGVINAPEKVTM 138 (483)
Q Consensus 78 ~~~~~~~~e~~~---~-~~~~-------~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (483)
+..+..+|+++. . +.+| .++..++. ++.++.... .++..++..+....
T Consensus 221 i~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~l------------- 287 (495)
T KOG2533|consen 221 IVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKL------------- 287 (495)
T ss_pred heEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhh-------------
Confidence 554444554432 1 1111 11111111 112221111 11111111111111
Q ss_pred hhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q psy3807 139 LGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKF 208 (483)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~ 208 (483)
....+..|.|-++.+..|.+..+. +.++....++.+++.+++|+++||+
T Consensus 288 ---------------v~~~~~~~lpl~l~~~~~~s~~~a------~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 288 ---------------VNYGFSYWLPLYLKSNGGYSELQA------NLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred ---------------ccccHHHHHHHHHHcCCCcChHHh------ccccchHHhhhHHHHHHHHHHHHHH
Confidence 111234677777776334444333 5778888999999999999999994
No 208
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.06 E-value=5.6e-05 Score=74.73 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=80.8
Q ss_pred hHHHHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 328 GINAVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
+......+.|.++ ++.|.+..+.+.......+...++.++.|+++||+|||+.++.+....+++..........+
T Consensus 17 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (396)
T TIGR00882 17 IMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGP---- 92 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 3344444555554 45799999999999999999999999999999999999999877655544333222111000
Q ss_pred cchhhhhhHHHH-HHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 407 FVQEMIDWMSYL-SVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 407 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
........ ..+.........+.. .+....+..|..+ .++...|.....+.++..+++.+.+.+.+
T Consensus 93 ----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 158 (396)
T TIGR00882 93 ----LLQSNILVGAIVGGLYLGFVFSAG-AGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS 158 (396)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhccc-hhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc
Confidence 00000111 111112222222222 2222233344322 23445667777778888888888776544
No 209
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.03 E-value=0.0015 Score=64.26 Aligned_cols=161 Identities=12% Similarity=-0.004 Sum_probs=96.8
Q ss_pred cchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCCh
Q psy3807 299 ISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRR 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr 378 (483)
..++..++++.+...+-+.++...... +...+..++.+.|+++...+..-....+.++.|+++..++.+|+|..
T Consensus 250 ~~w~~Y~~q~vflas~alalLY~TVLs------f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv 323 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLYFTVLS------FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV 323 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHHHHHhc------CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 356666666655443333333222111 12233445566699998888888888999999999999999999988
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIA 458 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~ 458 (483)
+.=+++......+..+.......++. +.........+..+.+.-.+. -+..-....+..|..|.+.|++..|+-
T Consensus 324 r~G~~~l~~q~~~L~~~v~~~~~~~~-----~~~~~s~~~l~~gi~~SR~GL-W~fDL~~~qi~Qe~V~~~~Rg~v~gvq 397 (432)
T PF06963_consen 324 RAGLWSLWWQWVCLALCVVSFWAPGS-----PFSSISAYLLLGGIALSRIGL-WSFDLAVTQIMQENVPESERGAVSGVQ 397 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCC-----CchhhHHHHHHHHHHHHHHHH-HhhhHHHHHhhcccCCHHHhhHHHHHH
Confidence 88778877776666655554443310 000111111111111111110 111222345678999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy3807 459 VLVNWIANFVVGL 471 (483)
Q Consensus 459 ~~~~~~~~~~~~~ 471 (483)
++..++...+.-.
T Consensus 398 ~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 398 NSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887655433
No 210
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.01 E-value=3.6e-05 Score=69.65 Aligned_cols=138 Identities=13% Similarity=0.030 Sum_probs=98.2
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
..+.+..|.|.+-++.|++..+...+...-.++..+| ++.|.+.|++|.|.++.+|.....++...+.......
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~----- 90 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR----- 90 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc-----
Confidence 3456778999999999999999988888888888765 8889999999999999999999988888776653221
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhcccc-ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGP-GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
.+..+. ....++.+..+.+.++ +........+.||. .||++.|+.-...-+++.+-+.++-.+.
T Consensus 91 ----i~~~~~-~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 91 ----IPSLPV-WLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ----cCccch-HHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 111111 1222333333333332 22223445578984 7999999999999998888777665544
No 211
>KOG0252|consensus
Probab=98.00 E-value=1.2e-05 Score=77.07 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=78.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHH
Q psy3807 345 LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISIL 424 (483)
Q Consensus 345 ~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (483)
+++...........++.+.|.++.|++.||+|||++....+++++++.++++..... ..+...+..++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~------------~~~~~~m~~L~ 148 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT------------TSPLGVMMTLC 148 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC------------CCCcchhhHHH
Confidence 455566778888899999999999999999999999999999999988755442211 11212333444
Q ss_pred HHHHHhccccc---cccceeeccccCCCchhHHHHHHHHHHHHHH
Q psy3807 425 GFVVFFAVGPG---SIPWMITAELFSQGPRPAAMSIAVLVNWIAN 466 (483)
Q Consensus 425 ~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~ 466 (483)
.+-...++|.+ |+..+.++|..-.+.||+-.+...+++..+.
T Consensus 149 ~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 149 FFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred HHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 44444444443 7888999999999999987776655554443
No 212
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00018 Score=68.33 Aligned_cols=131 Identities=14% Similarity=0.025 Sum_probs=103.1
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
...|.+.+..+++..++.........+.++.++..+++++|+|+|+-++.|+.++++++.++.-.....
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~----------- 102 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK----------- 102 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh-----------
Confidence 445777777899999999999999999999999999999999999999999999999988775332211
Q ss_pred hHHHHHHHHHHHHHHHhcccc-ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 414 WMSYLSVISILGFVVFFAVGP-GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.....+..++....+.+. ......+++.+.|++..+.-+.+...+..+|++++|.+..+++.
T Consensus 103 ---~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 103 ---SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred ---hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 122333334444444443 33455677888888888889999999999999999999888876
No 213
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.94 E-value=0.0025 Score=61.13 Aligned_cols=126 Identities=15% Similarity=0.003 Sum_probs=88.5
Q ss_pred hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhh-ccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH
Q psy3807 341 ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMD-RMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS 419 (483)
Q Consensus 341 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~d-r~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
+-.|++..+....+...+.+.++|-.+.+++.. |.++++...+|+....++...+....... ..+..
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~------------~~~~~ 304 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG------------SPWLF 304 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc------------cchHH
Confidence 345899999999999999999999999987766 67888888888888888777666543222 12222
Q ss_pred HHHHHHHHHHhccccccc-cceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 420 VISILGFVVFFAVGPGSI-PWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~-~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
....+++ +++.|...+ ......++.+++..|+.+|.-...+.+...++....+.+.|..
T Consensus 305 ~~~~~l~--G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 305 RPGVFLL--GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHH--HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222332 333222211 2234457777888999999999999999888888888777653
No 214
>KOG1330|consensus
Probab=97.91 E-value=3.9e-05 Score=73.82 Aligned_cols=143 Identities=12% Similarity=-0.011 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHH
Q psy3807 313 PLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFS 392 (483)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~ 392 (483)
.+.+.++....+..-- +.+..-.+.+-+..+.++...+++.....++..+.++++|++.||+.|+.++.+|..+-.++.
T Consensus 34 ~l~il~~vnlmny~Dr-~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADR-YTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHHhhh-hhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 3444444444333222 333333344545568889899999999999999999999999999999999999988888877
Q ss_pred HHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 393 IFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
+..++..+. |..+++-.+ ...-.....|+...++++.+|.+.|++..++.+....+|..++-.+
T Consensus 113 ~~~~fs~~F---------------wq~~l~R~~-vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv 176 (493)
T KOG1330|consen 113 FASGFSNHF---------------WQVLLCRGF-VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV 176 (493)
T ss_pred HHHHHHHHH---------------HHHHHHHHH-hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe
Confidence 777765322 222222222 2222334567777889999999999999999999888876655433
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.89 E-value=7e-05 Score=75.02 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=87.7
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc----cCChH-HHHhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR----MGRRT-LHLYGLGGMFIFSIFITISLLIKEFFGFV 408 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 408 (483)
+..+++.+..|.++.+.+.......+...+..++.|.++|| +|||| .++.+.....++.+.+......
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~------- 93 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF------- 93 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC-------
Confidence 44455556789999999999999999999999999999997 67754 5666666666655544331100
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 409 QEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
..............++..+.+....| ..++.+|+. +++.|++..++......+++.+.+.+.+++...
T Consensus 94 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~ 162 (437)
T TIGR00792 94 --SATGKLVYAYITYILLGLFYSFVNIP-YWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY 162 (437)
T ss_pred --CcchHHHHHHHHHHHHHHHHHhhccc-HhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011112222222333333322222 345667876 568899999999999999988888776666643
No 216
>KOG3626|consensus
Probab=97.86 E-value=0.00031 Score=72.32 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=55.8
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHh-hcCCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccC-
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFE-SSGLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMG- 376 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~g- 376 (483)
+.+.+++||.+. .+++....+...+..+..|.|.++| |.|.+...+..+....++ +..+|.+++|+++.|+.
T Consensus 384 s~~~ll~N~if~-----~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 384 SIKRLLSNPIFM-----LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred HHHHHhcCchHH-----HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 566777777543 2333333333456777778888886 579988888777755555 56778889999999875
Q ss_pred -ChHHHHhhhHHHHHHH
Q psy3807 377 -RRTLHLYGLGGMFIFS 392 (483)
Q Consensus 377 -rr~~l~~~~~~~~i~~ 392 (483)
-|....+..+...++.
T Consensus 459 ~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 459 SARGAAKFVIVCSVLSL 475 (735)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 3444444444433333
No 217
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.86 E-value=0.0002 Score=70.44 Aligned_cols=137 Identities=16% Similarity=0.094 Sum_probs=90.2
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhH-HHHHHHHHHHHHHHHHhhhc
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLG-GMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~-~~~i~~~~~~~~~~~~~~~~ 406 (483)
+......+.|.++++.|.+..+.+.......+...++.++.+.++||+|||+....... ...+..+.+.. ..+
T Consensus 19 ~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~--~~~---- 92 (382)
T TIGR00902 19 AYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA--GAH---- 92 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH--hhh----
Confidence 34556677788889999999999999999999999999999999999998644321111 11111111110 000
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
..+..++...+...+.+. ..|....++.|. .+.|++..|.....+.++..+++.+.+.+.+.+|
T Consensus 93 --------~~~~l~~~~~l~~~~~~~-~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g 156 (382)
T TIGR00902 93 --------NAWLLFIAIGLFALFFSA-GMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD 156 (382)
T ss_pred --------hHHHHHHHHHHHHHHHcc-chhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 122222332333333333 335555555442 4678999999999999999999999999988765
No 218
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.80 E-value=8.5e-05 Score=53.93 Aligned_cols=59 Identities=15% Similarity=0.206 Sum_probs=52.4
Q ss_pred chHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhh
Q psy3807 327 SGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGL 385 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~ 385 (483)
++...+..|.|.++++.|++..+.+....+..+..++++++++.++||.+|++..+...
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 35567778889999999999999999999999999999999999999999988876543
No 219
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.75 E-value=0.0026 Score=63.59 Aligned_cols=49 Identities=27% Similarity=0.498 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCCchHhhHHHHHHHHHHHHHHHHc
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILG 232 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~~~~~~~g~~~~~~~~ 232 (483)
+.+..+..++.+++.++.++++||+|+++..........++.+....++
T Consensus 263 ~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 263 SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 5677788899999999999999999998888877777777766655544
No 220
>KOG2504|consensus
Probab=97.73 E-value=0.00015 Score=73.23 Aligned_cols=134 Identities=14% Similarity=-0.010 Sum_probs=97.8
Q ss_pred HHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 332 VFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 332 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
+..+-+.+.++.+.+..+..++..+...+.....++.+.+.||+|.|++.+.|.++..+++++..+.....
T Consensus 65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~--------- 135 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLW--------- 135 (509)
T ss_pred ehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHH---------
Confidence 33455677778888888888888888899999999999999999999999999999999888776653221
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...+..-.+...++++...|. ..+.-.+-.+.|+.++|++.+-.-++.++.|.+.-++++.+|
T Consensus 136 -----~l~lt~gvi~G~G~~~~~~pa--iviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 136 -----QLYLTFGVIGGLGLGLIYLPA--VVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred -----HHHHHHHHHhhccchhhhcch--hhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 122222223333333333333 333335566889999999999999998888888888887765
No 221
>KOG3764|consensus
Probab=97.72 E-value=5e-05 Score=71.61 Aligned_cols=123 Identities=16% Similarity=0.039 Sum_probs=95.1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHH
Q psy3807 344 GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISI 423 (483)
Q Consensus 344 g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (483)
+.+..+.++......+.+++.+.+.|.++||+|+|..+++|..++..+.+++++...++ ..++.-
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~---------------~l~vAR 166 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP---------------MLFVAR 166 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH---------------HHHHHH
Confidence 44566788888889999999999999999999999999999999999988888743221 223333
Q ss_pred HHHHHHhccccccccceeeccccCCCc-hhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGP-RPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~-R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
.+-..+.++.. ....++.++.||.+. |++++|+.-.+-.+|..++|-..+.++|..|.
T Consensus 167 ~LQgvgsA~~~-tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk 225 (464)
T KOG3764|consen 167 SLQGVGSAFAD-TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK 225 (464)
T ss_pred HHhhhhHHHHH-hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC
Confidence 33333333322 223467789998776 69999999999999999999999999988774
No 222
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.69 E-value=0.00021 Score=72.49 Aligned_cols=139 Identities=12% Similarity=0.038 Sum_probs=86.6
Q ss_pred HHHHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhh----ccCC-hHHHHhhhHHHHHHHHHHHHHHHHHhh
Q psy3807 331 AVFYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMD----RMGR-RTLHLYGLGGMFIFSIFITISLLIKEF 404 (483)
Q Consensus 331 ~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~d----r~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~ 404 (483)
.+..|.+.++ +..|++....+.+..+.-+...+..++.|.++| |+|| |+.++++.+.++++..++... ++
T Consensus 24 ~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~---p~- 99 (473)
T PRK10429 24 IVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA---HL- 99 (473)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC---CC-
Confidence 3334444444 456999999999999999999999999999999 5688 566666766666655444211 10
Q ss_pred hccchhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 405 FGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
.+.........+...++..++++...| ..++.+|+. +++.|.+..+.....+.+++++.+.+.+++++.
T Consensus 100 -----~~~~~~~~~~~~~~~l~~~~~t~~~ip-~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~ 169 (473)
T PRK10429 100 -----FEGTAQYVFVCVTYILWGMTYTIMDIP-FWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNY 169 (473)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHcch-HHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111112222222333333332223 346678987 588999999987887888877776665554443
No 223
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.67 E-value=0.00038 Score=68.45 Aligned_cols=136 Identities=12% Similarity=0.008 Sum_probs=85.9
Q ss_pred HHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhh-HHHHHHHHHHHHHHHHHhhhcc
Q psy3807 329 INAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGL-GGMFIFSIFITISLLIKEFFGF 407 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~ 407 (483)
......+.|.++++.|.+..+.+.......+...++.++.+.++||+|||+...-.. ....+..+ ... ..
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~~~-~~------ 90 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV--AFW-FG------ 90 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH--HHH-Hh------
Confidence 455566777888999999999999999999999999999999999999953221111 11111111 111 00
Q ss_pred chhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 408 VQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
....+...+...+...+.+. ..+...++..+. .+.|+.+.+.....+.++..++|.+.+.+.+.+|
T Consensus 91 -----~~~~~~l~i~~~l~g~~~~~-~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g 156 (382)
T PRK11128 91 -----AHSFWLLFVAIGLFNLFFSP-LVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG 156 (382)
T ss_pred -----cccHHHHHHHHHHHHHHHcc-cccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01122222222222322222 334444454444 3457888888899999999999999999888765
No 224
>KOG2816|consensus
Probab=97.64 E-value=0.00078 Score=67.06 Aligned_cols=119 Identities=15% Similarity=0.141 Sum_probs=86.7
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHhHH-HHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 343 SGLSEKTAKFTTIGIGAVMVTMTIISI-PLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 343 ~g~s~~~~~~~~~~~~~~~~~g~~~~~-~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
.+.+..+........+....++.++.. .+...+|-|+....|+....+.....++... +|..+..
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~------------~w~~~~~-- 337 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE------------TWMMFAA-- 337 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc------------chhhhHH--
Confidence 477777777777888888888888887 7777889888888888888887777766432 1222211
Q ss_pred HHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 422 SILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.....++....+...+..+-...++.+|++.++.+.+..+.++++|.++..+..
T Consensus 338 ---~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 338 ---GVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred ---HHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 112223333445556777778889999999999999999999999999887753
No 225
>PRK09669 putative symporter YagG; Provisional
Probab=97.63 E-value=0.00024 Score=71.35 Aligned_cols=138 Identities=10% Similarity=0.055 Sum_probs=87.8
Q ss_pred HHhHHHH-HhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc----cCCh-HHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 333 FYYSTAL-FESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR----MGRR-TLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 333 ~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grr-~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
..|.+++ .+..|++....+....+.-+...+..++.|.++|| +||| +.++.+.+..+++..++.. .++ .
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~---~p~-~- 103 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY---TPD-F- 103 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh---CCC-C-
Confidence 3444444 45679999999999999999999999999999998 6774 5565666666555443322 110 0
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
..........+...++..+++....| ..++.+|+. +++.|.+..+.......++..+++.+.+++...+
T Consensus 104 ----~~~~~~~~~~~~~~l~~~~~t~~~ip-~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 104 ----GATGKIIYACVTYILLSLVYTAINVP-YCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHhhcch-HHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00111122222222333333322223 346778877 5578999999999999999888888766666544
No 226
>PRK11462 putative transporter; Provisional
Probab=97.43 E-value=0.0012 Score=66.62 Aligned_cols=139 Identities=11% Similarity=0.046 Sum_probs=90.9
Q ss_pred HHhHHHHH-hhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc----cCCh-HHHHhhhHHHHHHHHHHHHHHHHHhhhc
Q psy3807 333 FYYSTALF-ESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR----MGRR-TLHLYGLGGMFIFSIFITISLLIKEFFG 406 (483)
Q Consensus 333 ~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grr-~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 406 (483)
..|..+++ +..|+++..++.+..+.-+...+.-++.|.++|| +||| +.++++.+.++++..++... ++.
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~---p~~-- 103 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST---PDL-- 103 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC---CCC--
Confidence 33444444 4579999999999999999999999999999996 5765 56666766666665443321 100
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccC-CCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 407 FVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFS-QGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+.........+..+++..++.+...| ..++.+|+.+ ++.|++..+.-...+.++..+.+.+.+++.+..|
T Consensus 104 ----s~~~~~~y~~~~~~~~~~~~t~~~ip-y~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 104 ----SMNGKMIYAAITYTLLTLLYTVVNIP-YCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 01111122222333333344433323 3467788876 8899999999999999998888888776666544
No 227
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.40 E-value=0.0012 Score=63.79 Aligned_cols=140 Identities=9% Similarity=0.033 Sum_probs=74.1
Q ss_pred HHHHHHHhhhcchHHHHHHhHHHHHhhc---CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhH--HHHH
Q psy3807 316 IGIVMQLSQQFSGINAVFYYSTALFESS---GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLG--GMFI 390 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~--~~~i 390 (483)
+-.-+|.....+|+.-+.+|...+.++. +-...-.+..-....+.+.++++..+++-.+..+-..+.++.. +.+.
T Consensus 250 l~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~ 329 (412)
T PF01770_consen 250 LLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAG 329 (412)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHH
Confidence 3344455556678888888888888877 2223334555556666677777777877555555443333322 2222
Q ss_pred HHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHH
Q psy3807 391 FSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVG 470 (483)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~ 470 (483)
+.+++... ...|.......++...+.+.. ++...-++.....+.-+...|+.+++.-+...+.+
T Consensus 330 ~L~lm~~t---------------~~Iwv~Y~~yIif~~~y~fli-TiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT 393 (412)
T PF01770_consen 330 LLFLMSFT---------------GNIWVCYAGYIIFRSLYMFLI-TIASFQIAKNLSEERYALVFGINTFVALVLQTILT 393 (412)
T ss_pred HHHHHHHh---------------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccceeeeeeeHHHHHHHHHHheE
Confidence 22222221 123344444444444444322 22223333444556667778888777766655544
Q ss_pred H
Q psy3807 471 L 471 (483)
Q Consensus 471 ~ 471 (483)
.
T Consensus 394 ~ 394 (412)
T PF01770_consen 394 L 394 (412)
T ss_pred E
Confidence 3
No 228
>KOG3762|consensus
Probab=97.36 E-value=0.0014 Score=64.47 Aligned_cols=133 Identities=11% Similarity=-0.012 Sum_probs=88.6
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI 412 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 412 (483)
.+++=--+++.+....-.+...+....+.++.-++..++++|+|+-+++.+++.+..+=.+.+...
T Consensus 391 ~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------------- 456 (618)
T KOG3762|consen 391 FTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------------- 456 (618)
T ss_pred HHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--------------
Confidence 333333456777666666777888888999999999999999999999887776665544433322
Q ss_pred hhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHH-HHHHHHHHHHhHHhhhhcC
Q psy3807 413 DWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVN-WIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~g 481 (483)
+..|..+.+=++-.+..+.-|.. ...|++...|++.|+++.++..... -+|--+++++.+.+.+.+|
T Consensus 457 -~n~W~vLPieilqgit~aliWaa-~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg 524 (618)
T KOG3762|consen 457 -QNPWMVLPIEILQGITHALIWAA-IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG 524 (618)
T ss_pred -cCchheeeHHHHHHHHHHHHHHH-HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh
Confidence 12333333334444444444433 3478889999999999999987665 3455566666666665554
No 229
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.31 E-value=0.0023 Score=63.68 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=48.2
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC-hHHHHhhhHHHHHHHHH
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR-RTLHLYGLGGMFIFSIF 394 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~~~~~~~i~~~~ 394 (483)
.+..+++.++.|++..+.++......++.++++++.+.++||+|| |+.+.++..+..++...
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 444455556689999999999999999999999999999999965 66766665555444433
No 230
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.28 E-value=0.05 Score=54.85 Aligned_cols=45 Identities=22% Similarity=0.172 Sum_probs=34.2
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCc
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRG 211 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~ 211 (483)
....+..+++|++.++. ..+..+..+.+++|++++|++.||+|.+
T Consensus 303 ~~~i~a~~~lg~s~~~l------~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQL------IVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHHHhcCcCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34445555677776664 4666677888899999999999999987
No 231
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.23 E-value=0.013 Score=57.65 Aligned_cols=119 Identities=11% Similarity=-0.018 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHhhccCCh-----HH--HHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHH
Q psy3807 350 AKFTTIGIGAVMVTMTIISIPLMDRMGRR-----TL--HLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVIS 422 (483)
Q Consensus 350 ~~~~~~~~~~~~~~g~~~~~~l~dr~grr-----~~--l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (483)
..+...+..+.-++.+++..++..|.+|| .. +-+|...+..+.+++.......+ ++....+...++.
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~------~~~~~~s~~~lil 399 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG------GPSGLVSVWWLVL 399 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCcCHHHHHH
Confidence 34555666666777777777777775433 11 22344444444444444322221 0011122223344
Q ss_pred HHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhH
Q psy3807 423 ILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFP 474 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 474 (483)
..++........+|+--.++..+.|++..+..++.-......++.++..+.+
T Consensus 400 ~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 400 SYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 4444555566677777788889999999999888888877777777766655
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.0071 Score=59.71 Aligned_cols=143 Identities=16% Similarity=0.161 Sum_probs=98.0
Q ss_pred HHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc----cCC-hHHHHhhhHHHHHHHHHHHHHHHHHh
Q psy3807 330 NAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR----MGR-RTLHLYGLGGMFIFSIFITISLLIKE 403 (483)
Q Consensus 330 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~ 403 (483)
.....|..+++.+ .|+++..++.+.++.=+...+.-++.|.++|| +|| |+.++++.+-.++...++......
T Consensus 29 ~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~-- 106 (467)
T COG2211 29 GIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDF-- 106 (467)
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCc--
Confidence 4445566666554 69999999999999999999999999999996 566 566666666655555444332110
Q ss_pred hhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeecccc-CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 404 FFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF-SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
+.........+...++..+++...-| ..++.+|+- .++.|.+..+.-.....+++.+...++|++++.+|+
T Consensus 107 -------~~~~k~~ya~vtY~l~~l~YT~vniP-y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 107 -------SMTGKLIYALVTYMLLGLGYTLVNIP-YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred -------ccCcchHHHHHHHHHHHHHHHheeCc-hhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 01112223333344444555543333 346667766 378899999999999999999999999999988764
No 233
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.94 E-value=0.0046 Score=62.45 Aligned_cols=150 Identities=11% Similarity=-0.079 Sum_probs=81.0
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccC-----ChHHHHhhhHHH
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMG-----RRTLHLYGLGGM 388 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g-----rr~~l~~~~~~~ 388 (483)
..+.....+.+... ......-.|.+.+++|.+..+.+.......+...+-.+ ++.++||++ ||+.++++.++.
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 33444455555554 23333333444456899998887777777777666554 999999996 566666665443
Q ss_pred H-HHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHH---HHHHHHHHHH
Q psy3807 389 F-IFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAA---MSIAVLVNWI 464 (483)
Q Consensus 389 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~---~g~~~~~~~~ 464 (483)
. ++...+.. . .+. ...... ..+...+.........-.+..|..+ +.+... .+.......+
T Consensus 106 ~~~~~~~l~~----~---------~~~-~~~~~~-~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~ 169 (468)
T TIGR00788 106 SAILYGLLPG----K---------VSS-AKVAAA-FIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASAT 169 (468)
T ss_pred HHHHHHhccc----c---------cch-HHHHHH-HHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHH
Confidence 2 21111110 0 011 111111 1122222222233445677788887 444443 3333344457
Q ss_pred HHHHHHHHhHHhhhhcC
Q psy3807 465 ANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 465 ~~~~~~~~~~~l~~~~g 481 (483)
|..+++.+.+.+.+.+|
T Consensus 170 G~~vg~~l~G~l~~~~~ 186 (468)
T TIGR00788 170 GGLISSLLGGPLLDKTL 186 (468)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88888888888877654
No 234
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.90 E-value=0.0083 Score=59.07 Aligned_cols=65 Identities=14% Similarity=0.009 Sum_probs=52.1
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC-hHHHHhhhHHHHHHH
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR-RTLHLYGLGGMFIFS 392 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~~~~~~~i~~ 392 (483)
.+.....|.|.++++.|++..+.+.......+..+++.++.+.++||.++ |+.+.+..++.++.+
T Consensus 17 ~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~ 82 (400)
T PF03825_consen 17 AYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALAL 82 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 44566677888999999999999999999999999999999999999864 566655444444433
No 235
>KOG2325|consensus
Probab=96.87 E-value=0.0034 Score=62.08 Aligned_cols=120 Identities=9% Similarity=-0.014 Sum_probs=85.4
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCC-hHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHH
Q psy3807 343 SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGR-RTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVI 421 (483)
Q Consensus 343 ~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
.+-+.+..++......++..+++++.++...|-+. |+.++.|.++++++.++.....+.+ ....+.++
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~----------~~~~y~mL- 134 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP----------NGVKYLML- 134 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc----------cchHHHHH-
Confidence 56666777888888999999999999999999886 7888889999999888775544332 11223333
Q ss_pred HHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhH
Q psy3807 422 SILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFP 474 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 474 (483)
+.-+..+.+.+.....-.|++.....+.|.++.+..+...-++.+++|.+-+
T Consensus 135 -~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 135 -VARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred -HHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 3333444444555667788888888888999988887766666666665543
No 236
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.85 E-value=0.0029 Score=61.63 Aligned_cols=56 Identities=11% Similarity=0.062 Sum_probs=42.9
Q ss_pred HHHHHHhHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhh
Q psy3807 329 INAVFYYSTALFES-SGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYG 384 (483)
Q Consensus 329 ~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 384 (483)
+.....+.|.++++ .|++..+.+.+.....+..++..++.|.+.||+|.||-++..
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~ 79 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWF 79 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHH
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHH
Confidence 44555556777765 899999999999999999999999999999999976655433
No 237
>KOG2563|consensus
Probab=96.84 E-value=0.0081 Score=58.12 Aligned_cols=123 Identities=22% Similarity=0.060 Sum_probs=81.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHH--HHHHHH
Q psy3807 346 SEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSY--LSVISI 423 (483)
Q Consensus 346 s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 423 (483)
+.+.+.+.+.++.++.++-.+.+.|+.||+|-|...+++....+++..+=.+.... ..+...+ .....-
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p---------~v~~~f~~~l~~~Gq 147 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLP---------FVPPLFRRPLTHTGQ 147 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCc---------cccccchhhhhHHhH
Confidence 55567788889999999999999999999999999999999888877654443211 0111111 111111
Q ss_pred HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
.+.. ........++.-+.+--||++.|+++..+..+.+.+|..++..+-|.+..
T Consensus 148 ~iaa-~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 148 SIAA-AAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HHHH-HhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 1111 11111112222333445899999999999999999999988877666543
No 238
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.84 E-value=0.053 Score=51.35 Aligned_cols=59 Identities=15% Similarity=0.064 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc
Q psy3807 314 LIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR 374 (483)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr 374 (483)
.+...+.+.+...+-+..+..|.|.+- ..+ .....+.+.....+..++|+.+..++..+
T Consensus 246 il~LG~~qslFE~smy~FVflWtPaL~-~~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 246 ILLLGLIQSLFEGSMYLFVFLWTPALD-PDD-EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hHHHHHHHHHHHHHHHHheeeeeceec-CCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334444455555445556666777764 111 22345677777788889998888655543
No 239
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.80 E-value=0.00047 Score=68.73 Aligned_cols=130 Identities=10% Similarity=-0.026 Sum_probs=73.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHH-HHHhhhccchhhhhhHHHHHHHHH
Q psy3807 345 LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISL-LIKEFFGFVQEMIDWMSYLSVISI 423 (483)
Q Consensus 345 ~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 423 (483)
+++...+....+..++.++|..+.....-+..-|+++..+.++.++..+.-.... ..+...| .+.. +..+.--
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~G-----i~d~-~f~lgd~ 325 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLG-----IPDQ-WFALGDT 325 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeC-----cCCe-EEEEEhH
Confidence 5655556666666677777777776666666667776655544443322111100 0000000 0000 1001111
Q ss_pred HHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 424 LGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+......+..-|. ...++|+.|+..-|+..++..++.+++..++..+...+.+.+|
T Consensus 326 ~l~~~~~~i~~mP~-lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 326 ILEEVIGMIAFMPS-LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11122222222232 2557899999999999999999999999999999888877654
No 240
>PRK09848 glucuronide transporter; Provisional
Probab=96.78 E-value=0.014 Score=58.80 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=43.8
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc----CChHHH-HhhhHHHHHHH
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM----GRRTLH-LYGLGGMFIFS 392 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~----grr~~l-~~~~~~~~i~~ 392 (483)
+..+++.+..|++..+.+....+..+...+..++.|.++||. |||+.. +.+.+...++.
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 333444445699999999999999999999999999999996 766644 55554444433
No 241
>KOG2325|consensus
Probab=96.76 E-value=0.0015 Score=64.49 Aligned_cols=43 Identities=7% Similarity=-0.055 Sum_probs=34.5
Q ss_pred ceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 439 WMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 439 ~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
.+.-+|+.-++.+++..++....+..+..++|...-.+....|
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g 452 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG 452 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC
Confidence 4556799988999999999999888888888887766666554
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.65 E-value=0.053 Score=45.36 Aligned_cols=132 Identities=8% Similarity=-0.031 Sum_probs=83.7
Q ss_pred hHHHHHHhHHHHHhhcC------CCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHH
Q psy3807 328 GINAVFYYSTALFESSG------LSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLI 401 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g------~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~ 401 (483)
++....+....++++.+ .++........+......+++++.+.+.+++|.|..+++|.+...+-..... .
T Consensus 11 af~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~----~ 86 (156)
T PF05978_consen 11 AFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF----Y 86 (156)
T ss_pred HHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----h
Confidence 33444444444444333 2333445566677788888899999999999999999888766654332211 1
Q ss_pred HhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 402 KEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
+ ..+..+..-.+...+.+.-|.+ .-.+..|....+.|++..++...+...+.+++..+.-.+
T Consensus 87 ~------------~~~~l~~~s~l~G~~~a~lW~a-qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 87 P------------NSYTLYPASALLGFGAALLWTA-QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred h------------hHHHHHHHHHHHhhhhHHhhHh-hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1233333334444444444433 335667888889999999999999998888887764443
No 243
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.59 E-value=0.03 Score=58.62 Aligned_cols=137 Identities=12% Similarity=0.055 Sum_probs=89.1
Q ss_pred hHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc-cCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh
Q psy3807 335 YSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR-MGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID 413 (483)
Q Consensus 335 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
+..++.+..|++...+...........-+..++++++.|+ +||++.+.++.++..++..++.+..... ....
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~-------~~~~ 82 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS-------SGHP 82 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc-------cccc
Confidence 3444455678887777777777777778888899999996 6999999999888888877666522110 0001
Q ss_pred hHHHHHHHHHHHHHHHhccccccccceeeccccCCC---chhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807 414 WMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQG---PRPAAMSIAVLVNWIANFVVGLGFPTLNLP 479 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 479 (483)
......++.+.+...+ ..+.-|...+...|.++.+ .|.+...+.....++|+++++.+.+++.+.
T Consensus 83 ~~~~~~l~gLaLia~G-~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~ 150 (654)
T TIGR00926 83 LHDLLDLLGLALIALG-TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGD 150 (654)
T ss_pred hHHHHHHHHHHHHHhh-ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111122222222222 2223344556677777643 477889999999999999999999988744
No 244
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.56 E-value=0.018 Score=42.31 Aligned_cols=69 Identities=14% Similarity=0.017 Sum_probs=60.5
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHH
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITIS 398 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~ 398 (483)
+.++...|.+.++.++|..+.++......++.++|.+...++.++.++|+.+..+.+...++...+++.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567789999999999999999999999999999999999999888888888888888888777764
No 245
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.22 E-value=0.086 Score=49.97 Aligned_cols=55 Identities=24% Similarity=0.159 Sum_probs=45.7
Q ss_pred HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHH
Q psy3807 339 LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSI 393 (483)
Q Consensus 339 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~ 393 (483)
+.++.|++..+.......-.+...+...+.|.+.||+|||+.-+..+++..++++
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl 114 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL 114 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 4467899998888888888888889999999999999999988777666666654
No 246
>KOG3098|consensus
Probab=96.22 E-value=0.17 Score=50.17 Aligned_cols=125 Identities=21% Similarity=0.143 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHHHHHhHHHHhhc---cCChHHHHhhhHHHHHHHHHHHHHHHHHh-hhccchhhhhhHHHHHHHHHH-H
Q psy3807 351 KFTTIGIGAVMVTMTIISIPLMDR---MGRRTLHLYGLGGMFIFSIFITISLLIKE-FFGFVQEMIDWMSYLSVISIL-G 425 (483)
Q Consensus 351 ~~~~~~~~~~~~~g~~~~~~l~dr---~grr~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 425 (483)
...+...+++++.+....+.+.+| +||++.+.++..+..+..++.-.....+. ...++.....+..-..+..++ .
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 345666688888888888888765 68899988887777776665554332221 111111111222222222222 2
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
.....-..++...+.+++..+ ++.|.++.++.-.-..+.+.++-+..|..
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 233333445666778888888 57789898888888888877766665543
No 247
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.13 E-value=0.05 Score=52.42 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=73.5
Q ss_pred HHHHHHhHHHHhhccC-----ChHHHHh-hhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhcccc
Q psy3807 361 MVTMTIISIPLMDRMG-----RRTLHLY-GLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGP 434 (483)
Q Consensus 361 ~~~g~~~~~~l~dr~g-----rr~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (483)
.-+.....|+.+|+.+ ||...++ |...++.+..++.......+.....++...+ .+.....+.+...+.+...
T Consensus 27 ~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~-~g~~~a~l~F~l~G~G~~~ 105 (403)
T PF03209_consen 27 VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW-LGLALAALAFLLYGLGVHA 105 (403)
T ss_pred HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH-HHHHHHHHHHHHHHhhHhH
Confidence 3456888999999988 8866655 4555555555444443332111111111122 1222222222222222222
Q ss_pred -ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 435 -GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 435 -~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
+....+..+|..|++.|+++.++....--++-+++..+++.+++.+
T Consensus 106 s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 106 SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 2224577889999999999999999999999999999999988875
No 248
>KOG2816|consensus
Probab=95.99 E-value=0.092 Score=52.52 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhcccccc
Q psy3807 357 IGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGS 436 (483)
Q Consensus 357 ~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (483)
.++..++.+...|.++||+|||..+......+.+..+.+.+.. +...+ +.-...++ ....+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-----------------~~~~~-~~~l~g~~-~~~~s 131 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-----------------YWFFL-LLGLSGGF-SAIFS 131 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-----------------HHHhh-hcccccch-hhhhh
Confidence 3778889999999999999999999888777776655554421 22222 11111111 12234
Q ss_pred ccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 437 IPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 437 ~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...++.+++...+.|....|+.+..-..+..++|.+...+....|
T Consensus 132 ~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~ 176 (463)
T KOG2816|consen 132 VGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG 176 (463)
T ss_pred hhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC
Confidence 456888999999999999999999999999999998888776654
No 249
>KOG3574|consensus
Probab=95.92 E-value=0.31 Score=46.46 Aligned_cols=42 Identities=10% Similarity=-0.084 Sum_probs=35.6
Q ss_pred eeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 440 MITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 440 ~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
+..+.+.++..-|+-+.+-++.+++|+-.-..+...+.|.++
T Consensus 392 af~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 392 AFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 567889999999999999999999998777777777777653
No 250
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.72 E-value=0.0027 Score=64.87 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=0.0
Q ss_pred CccccCCcccccccchhhhhHHHHHHHHHHHHhccc
Q psy3807 1 MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIE 36 (483)
Q Consensus 1 ~yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~ 36 (483)
.|+=|.++++.-+.+.++.+....+|..+|++++..
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp ------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 488999999999999999999999999999988854
No 251
>KOG0637|consensus
Probab=95.46 E-value=0.018 Score=55.90 Aligned_cols=157 Identities=16% Similarity=0.053 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhc----cCChHHHH-hhhH
Q psy3807 312 KPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR----MGRRTLHL-YGLG 386 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grr~~l~-~~~~ 386 (483)
+.++....+.+..|++- ..-..|.|-+++++|.+.......-...-+.+++...+.|..+|| +||||..+ .+..
T Consensus 32 ~~li~v~~ia~Gvqf~w-A~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGW-ALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 44556666666667644 444455666667889988777777666777888889999999996 58776655 4555
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhhhhhHHHHH-HHHHHHHH--HHhccccccccceeeccccCCCchhH-HHHHHHHHH
Q psy3807 387 GMFIFSIFITISLLIKEFFGFVQEMIDWMSYLS-VISILGFV--VFFAVGPGSIPWMITAELFSQGPRPA-AMSIAVLVN 462 (483)
Q Consensus 387 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~e~~p~~~R~~-~~g~~~~~~ 462 (483)
...++++++..........+.+. ..+...... +..+-+.. ...+...+| .-++.+++...+.|.+ +.+....+-
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~-~~~~~~rai~~~~lg~~LLD~A~n~~qgp-~ra~L~Dl~~~d~~~~~Ans~f~~f~ 188 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNE-RKPVKPRAIVLFILGFWLLDVANNTLQGP-CRALLADLARGDAKKTRANSVFSFFM 188 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCc-ccccchHHHHHHHHHhHHHHhhhhhhhhh-HHHHHHHhccChhhhhccchhHHHHH
Confidence 66666665555433222111111 111122222 22222222 222233344 4577788887777777 888887777
Q ss_pred HHHHHHHHH
Q psy3807 463 WIANFVVGL 471 (483)
Q Consensus 463 ~~~~~~~~~ 471 (483)
.+|+.++-.
T Consensus 189 avGnvLGY~ 197 (498)
T KOG0637|consen 189 AVGNVLGYA 197 (498)
T ss_pred Hhcceeeee
Confidence 777766533
No 252
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=95.24 E-value=0.37 Score=45.72 Aligned_cols=132 Identities=10% Similarity=-0.076 Sum_probs=94.1
Q ss_pred HHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 330 NAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
..+....+.+-++.|+|...++..+.+.-++.-..+++..++.+|+|.++.+..+.+..+++.++=...
T Consensus 29 tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~----------- 97 (395)
T COG2807 29 TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG----------- 97 (395)
T ss_pred hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 444455666777889999999999999999999999999999999999999888777666655432221
Q ss_pred hhhhhHHHHHHHHHHHHHHHhcccc-ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 410 EMIDWMSYLSVISILGFVVFFAVGP-GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
. ...........+.+++. +.+.-..+-|-||.+. +..+|+++..-.+++.+++...+++.+..
T Consensus 98 -----~--~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~ 161 (395)
T COG2807 98 -----G--LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHS 161 (395)
T ss_pred -----c--HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 0 11111222222223322 2223355678888765 89999999999999999999999887765
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.86 E-value=0.057 Score=39.14 Aligned_cols=50 Identities=20% Similarity=0.161 Sum_probs=38.0
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhH
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTV 216 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~ 216 (483)
.+++.++. +.|++..+. |.+.++..+...++.+++|.++||+||.+....
T Consensus 21 Pfl~~~~~-~~Gl~~~~i------Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 21 PFLPLYLK-QLGLSPSQI------GILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred hhhhHhhh-hcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 45555554 355555444 899999999999999999999999999665443
No 254
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.82 E-value=0.27 Score=45.66 Aligned_cols=131 Identities=18% Similarity=0.065 Sum_probs=76.5
Q ss_pred HHhHHHHHhhcCCCC--cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807 333 FYYSTALFESSGLSE--KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE 410 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 410 (483)
....+.+..+.+.+. ...........+...++.++.+.+.||.|||+.+..+.....++.+.......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---------- 91 (338)
T COG0477 22 SPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN---------- 91 (338)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----------
Confidence 344555555555444 25667777777888888899999999999997777666543333222222110
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCC-CchhHHHHHHHH-HHHHHHHHHHHHhHHhh
Q psy3807 411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQ-GPRPAAMSIAVL-VNWIANFVVGLGFPTLN 477 (483)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~R~~~~g~~~~-~~~~~~~~~~~~~~~l~ 477 (483)
...+..+..... .........+....+..|..|. +.|+...+.... ...++..+++.+...+.
T Consensus 92 ---~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 92 ---VGLALLLILRLL-QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred ---chHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111111 1111112345566788899887 678888888887 46667777765544443
No 255
>KOG3626|consensus
Probab=94.61 E-value=0.19 Score=52.36 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=35.7
Q ss_pred HHHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccC
Q psy3807 159 EKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFG 209 (483)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~G 209 (483)
.+|+|.+++++||.+.+.+.. ++..+...+..+|.+++|++..|+-
T Consensus 412 ~tFlPKyLE~Qfg~sas~An~-----l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 412 ITFLPKYLETQFGISASLANI-----LTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHhhHHHHHHHcCCCHHHHHH-----Hhhhhhhhhhhhhhhccceeeeeec
Confidence 478999999999998777641 3334445667799999999999974
No 256
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.61 E-value=0.58 Score=42.32 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=31.3
Q ss_pred HHHHHHHhccccccccceeeccc--cCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 423 ILGFVVFFAVGPGSIPWMITAEL--FSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~e~--~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
+.++...+.-|.+++.-....|. ..++.-|.-.|+.-.++++.-.+...+...+
T Consensus 210 ~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 210 FGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred HHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344455556666554444443 2445557778888888887766655554433
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.33 E-value=0.21 Score=48.63 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=30.0
Q ss_pred ceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 439 WMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 439 ~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
+..+.|-.|++.|..++|.......+|..++..+.-.+
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34456667889999999999999988888887775544
No 258
>KOG0637|consensus
Probab=94.12 E-value=0.079 Score=51.58 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHHHHhh
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTLHLYG 384 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~ 384 (483)
-..+..+..-+.+...-++.||+|-|+.+..+
T Consensus 337 GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~ 368 (498)
T KOG0637|consen 337 GLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGG 368 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcceEEeeh
Confidence 44556677777888889999999954444433
No 259
>KOG3762|consensus
Probab=93.97 E-value=0.054 Score=53.81 Aligned_cols=63 Identities=19% Similarity=0.114 Sum_probs=52.9
Q ss_pred hHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHH
Q psy3807 328 GINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFI 390 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i 390 (483)
+...+....+.+++++|+++.+.+.++..--++.+++.+++++++||+.+|+.++++..+..+
T Consensus 26 ~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 26 RFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred cccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 446667788889999999999999999999999999999999999999877666665544443
No 260
>KOG4686|consensus
Probab=93.38 E-value=0.26 Score=45.09 Aligned_cols=43 Identities=16% Similarity=0.040 Sum_probs=35.9
Q ss_pred HHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
-+..+++.+|++..++ +.+.+....-.++.+++.|.++|+.||
T Consensus 287 g~~fF~~rfGlS~~~a------~~i~s~vy~Isav~spvfg~i~Dk~G~ 329 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSA------GNILSTVYGISAVLSPVFGAISDKYGF 329 (459)
T ss_pred hHHHHHHhhCCChhhc------cchhhhhhhhhhhhhhhHHHhHhhhcc
Confidence 3567889999988777 567777777778889999999999999
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=92.96 E-value=0.48 Score=47.35 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=75.4
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc---C--ChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807 337 TALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM---G--RRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM 411 (483)
Q Consensus 337 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~---g--rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 411 (483)
|++.+++|+++.+.........+ -....++.|.++|-+ | ||+-++++.++..++.+.++.....
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~---------- 82 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS---------- 82 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc----------
Confidence 45556789888766554444333 344578889999986 2 4445555655554444444432110
Q ss_pred hhhHHHHHHHHHHHHHHHhccccccccceeecccc---CCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807 412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELF---SQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA 482 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~ 482 (483)
.++.. ...+.+++...+..+ ...+.-+...|.. |.+ |+.-.+.+.....+|++++..+.+++.+..++
T Consensus 83 ~~s~~-~~~~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~ 153 (433)
T PF03092_consen 83 ESSAA-IAVVLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP 153 (433)
T ss_pred cchhh-hHHHHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence 01111 111222222222221 1222344555665 555 88889999999999999999999888887653
No 262
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=92.86 E-value=0.065 Score=43.41 Aligned_cols=46 Identities=26% Similarity=0.325 Sum_probs=36.5
Q ss_pred ccccCCcccccccchhhhhHHHHHHHHHHHHhccccccCCCCCcchhh
Q psy3807 2 YISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLL 49 (483)
Q Consensus 2 yi~E~~p~~~RG~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~ 49 (483)
++.|..|+++|++..+..+....+|..++..+.... .+..+||..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~ 120 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVL--AQFLGWRAPF 120 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH--hcccchHHHH
Confidence 467999999999999999999999999887766432 3445788744
No 263
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.43 E-value=2.7 Score=42.20 Aligned_cols=127 Identities=9% Similarity=0.037 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHHHH-HHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccc-------hhh-hhhH------
Q psy3807 351 KFTTIGIGAVMVTM-TIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFV-------QEM-IDWM------ 415 (483)
Q Consensus 351 ~~~~~~~~~~~~~g-~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~-~~~~------ 415 (483)
.+.-...-+...+. .++.+++++|++|++++-+..........++++........-+- ... +.+.
T Consensus 46 ~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~ 125 (472)
T TIGR00769 46 PFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAI 125 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHH
Confidence 33333333333333 77789999999999988776666666555555543211100000 000 0000
Q ss_pred -HHHHHHHHHHHHHHhcccccc-ccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhh
Q psy3807 416 -SYLSVISILGFVVFFAVGPGS-IPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477 (483)
Q Consensus 416 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 477 (483)
..+....+.+..-.++.-.-+ +.|.+.+|+++.+.-.+-.++....++++.++++.+.-.+.
T Consensus 126 ~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 126 LRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111222222233322333 67899999999999999999999999999999998876655
No 264
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=90.34 E-value=0.95 Score=44.00 Aligned_cols=107 Identities=8% Similarity=0.028 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHHHH-hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhc
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTLHL-YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFA 431 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (483)
...+.++...+-.++-|.++|+-|+||..+ +...+..++.+.+.+. + +....+..+..+.+...++.
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i---~---------~~s~~~~~l~~~il~~i~~~ 130 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI---P---------PGSYLLLLLLFLILASIGFE 130 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh---C---------CCchHHHHHHHHHHHHHhcc
Confidence 445556666666777888999998665554 3334444444444332 1 11233344444444444444
Q ss_pred cccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 432 VGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 432 ~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
.+. ....++..++.+++.-++..++....+++++.+.-..
T Consensus 131 ~s~-Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 131 FSN-VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred hhh-eehhhHhhhhcCccccCcccccccccccccchHHHHH
Confidence 432 3355677788888888888999888888887765444
No 265
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.63 E-value=2.1 Score=31.49 Aligned_cols=55 Identities=9% Similarity=0.064 Sum_probs=41.8
Q ss_pred HHHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhHHHHH
Q psy3807 160 KFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLA 220 (483)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~~~~ 220 (483)
+-+-|.++++.+++.++. +++.+..++|+.+|++...++.++..+++.....-+.
T Consensus 12 TplLP~M~~~~~ls~~~a------g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQA------GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred HhHhHHHHHhcCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 335567778888887776 8999999999999999999999986554444433333
No 266
>KOG4332|consensus
Probab=88.67 E-value=15 Score=33.74 Aligned_cols=98 Identities=10% Similarity=0.006 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHHhHHHHhhccCCh--HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHH
Q psy3807 351 KFTTIGIGAVMVTMTIISIPLMDRMGRR--TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVV 428 (483)
Q Consensus 351 ~~~~~~~~~~~~~g~~~~~~l~dr~grr--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (483)
+.+..-..+..++|+-+...+..|-..| ..+.+.+.+.++...+........ +.........+.++++-.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vs--------P~kes~~~s~i~F~~~E~ 356 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVS--------PSKESPSESLIGFCLFEA 356 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccC--------CCcCCchHHHHHHHHHHH
Confidence 4555556677777777776666554333 444444444444433332222111 011112223444555555
Q ss_pred HhccccccccceeeccccCCCchhHHHHH
Q psy3807 429 FFAVGPGSIPWMITAELFSQGPRPAAMSI 457 (483)
Q Consensus 429 ~~~~~~~~~~~~~~~e~~p~~~R~~~~g~ 457 (483)
+.+.-+.++. -+-+...|.+.|++.+.+
T Consensus 357 cvGlfwPSim-kmRsqyIPEearstimNf 384 (454)
T KOG4332|consen 357 CVGLFWPSIM-KMRSQYIPEEARSTIMNF 384 (454)
T ss_pred HHhhcchHHH-HHHHhhCCHHHHhhhhhh
Confidence 5565555543 223455566666655443
No 267
>KOG3810|consensus
Probab=87.71 E-value=3.3 Score=39.25 Aligned_cols=146 Identities=13% Similarity=0.042 Sum_probs=71.8
Q ss_pred hhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcc---hhHHHHHHHHHHHHHHHhHHHHhhccCC
Q psy3807 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKT---AKFTTIGIGAVMVTMTIISIPLMDRMGR 377 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~---~~~~~~~~~~~~~~g~~~~~~l~dr~gr 377 (483)
..+..++|...+ .-+|.....+|++-+.+|.-.+-++.. +... .+..-.+..+.+.++.+..+.+.-...|
T Consensus 227 l~~~y~np~ll~-----WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r 300 (433)
T KOG3810|consen 227 LQECYSNPRLLK-----WSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR 300 (433)
T ss_pred HHHHhcCchhhh-----hHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence 344555554433 333444455688888888877777653 2222 2233344455666777777777655555
Q ss_pred hHHHH--hhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHH
Q psy3807 378 RTLHL--YGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAM 455 (483)
Q Consensus 378 r~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~ 455 (483)
..-++ ++....+.+.+.+.. +...|++.+...++...+..... +....+++....+.-|...
T Consensus 301 ~g~~ll~~~s~~~agllf~m~~---------------t~~Iw~~Ya~yvlfr~~y~l~it-iA~~~iA~nL~~e~~gLvF 364 (433)
T KOG3810|consen 301 WGDLLLAVGSAVQAGLLFIMAQ---------------TQHIWVCYAGYVLFRVIYQLTIT-IATFQIARNLSSELFGLVF 364 (433)
T ss_pred hhHHHHHHHHHHhhhhhhhhhc---------------ccceehhhhhHHHHHhhHhhhhh-HHHHHHHHhhhhhhheeee
Confidence 42222 222222222222211 11234444444444444443332 2222334445556667777
Q ss_pred HHHHHHHHHHHHH
Q psy3807 456 SIAVLVNWIANFV 468 (483)
Q Consensus 456 g~~~~~~~~~~~~ 468 (483)
|+..++.-+...+
T Consensus 365 GiNTFvAl~lQsi 377 (433)
T KOG3810|consen 365 GINTFVALILQSI 377 (433)
T ss_pred ehHHHHHHHHHHh
Confidence 7777665554433
No 268
>KOG3098|consensus
Probab=87.48 E-value=6.5 Score=39.24 Aligned_cols=111 Identities=12% Similarity=-0.016 Sum_probs=81.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHH
Q psy3807 346 SEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILG 425 (483)
Q Consensus 346 s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (483)
++..-+....+......+.+++++.+.|+.+.|..+.++..........+... ..+...+.-.+
T Consensus 48 ~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~----------------N~y~~yfssal 111 (461)
T KOG3098|consen 48 SAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP----------------NSYYLYFSSAL 111 (461)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc----------------chHHHHHHHHH
Confidence 34344555788889999999999999999999999988877666554433321 13444555555
Q ss_pred HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
...+.+.-|.. .-.|.+|..+.+.+.+.+++..+++..+.+++....
T Consensus 112 lG~Gaallw~G-qG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 112 LGFGAALLWTG-QGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hhhhHHheecc-cceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 55555554444 347788999999999999999999999888886553
No 269
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=84.40 E-value=54 Score=34.78 Aligned_cols=13 Identities=8% Similarity=0.508 Sum_probs=8.4
Q ss_pred CchhHHHHHHHHH
Q psy3807 241 EGWPVLLAMLGMF 253 (483)
Q Consensus 241 ~~w~~~~~~~~i~ 253 (483)
.+|...|.+.++.
T Consensus 158 ~~~~~aF~i~~i~ 170 (654)
T TIGR00926 158 DCYPLAFGVPAIL 170 (654)
T ss_pred cchHHHHHHHHHH
Confidence 3587777776443
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.47 E-value=2.3 Score=42.35 Aligned_cols=42 Identities=10% Similarity=-0.123 Sum_probs=34.4
Q ss_pred ceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhc
Q psy3807 439 WMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY 480 (483)
Q Consensus 439 ~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 480 (483)
-++-+.+..|..-|+.+.+-++++++|+-.-..+.-.++|.+
T Consensus 427 ~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 427 MAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 355678889999999999999999999877777777776654
No 271
>KOG1237|consensus
Probab=81.93 E-value=45 Score=34.64 Aligned_cols=147 Identities=14% Similarity=-0.005 Sum_probs=85.8
Q ss_pred HHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhcc-CChHHHHhhhHHHHHHHHHHHHHHHHHhhhcc----
Q psy3807 333 FYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRM-GRRTLHLYGLGGMFIFSIFITISLLIKEFFGF---- 407 (483)
Q Consensus 333 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---- 407 (483)
.....++...++.+...+.-.............+++++++|.+ ||=+.+.++.++..++++++......+.....
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 3444455555666655554445555566777788999999975 88899999998888888888777665532210
Q ss_pred -chh---hhhhHHHHHHHHHHHHHHH-hccccccccceeeccccCC----Cchh--HHHHHHHHHHHHHHHHHHHHhHHh
Q psy3807 408 -VQE---MIDWMSYLSVISILGFVVF-FAVGPGSIPWMITAELFSQ----GPRP--AAMSIAVLVNWIANFVVGLGFPTL 476 (483)
Q Consensus 408 -~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~----~~R~--~~~g~~~~~~~~~~~~~~~~~~~l 476 (483)
.+. +........++...+.... ...|.-+....+-+|-++. +.+. .-........+++.+++..+..+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 010 1111112222222233332 2233345556677777762 2223 556666666777788777777776
Q ss_pred hhh
Q psy3807 477 NLP 479 (483)
Q Consensus 477 ~~~ 479 (483)
.+.
T Consensus 218 q~~ 220 (571)
T KOG1237|consen 218 QDN 220 (571)
T ss_pred hhc
Confidence 554
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=78.31 E-value=28 Score=34.27 Aligned_cols=146 Identities=8% Similarity=0.043 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHhhhcchHHHHHHhHHHHHhh-cCCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccCChHHHHhhhHHHH
Q psy3807 312 KPLIIGIVMQLSQQFSGINAVFYYSTALFES-SGLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMGRRTLHLYGLGGMF 389 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~grr~~l~~~~~~~~ 389 (483)
+.+++.|+..++.++= -.-.+..|++.+. .|++..+..--..+... ..++.-+....+.|.++-|++++++.+...
T Consensus 5 ~~~~llc~~gf~~~fr--PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i 82 (412)
T PF01770_consen 5 KITLLLCLFGFFKEFR--PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYI 82 (412)
T ss_pred HHHHHHHHHHHHHhcC--CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3444555544443321 1123445666655 78887766544444443 344555666788999999999998877766
Q ss_pred HHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHH
Q psy3807 390 IFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVV 469 (483)
Q Consensus 390 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~ 469 (483)
+...++.+... ...+.+.-+++....+.- ...+.++=-..|++.--++++.+.+..-+|.+++
T Consensus 83 ~t~~lll~~~s---------------v~~mq~~q~~yg~~~a~e--vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s 145 (412)
T PF01770_consen 83 ITWLLLLFGTS---------------VLAMQLMQFFYGLATAAE--VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFIS 145 (412)
T ss_pred HHHHHHHHHCc---------------HHHHHHHHHHHHHHHHHH--HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655544311 112222333333322221 1122333334466777788888888777777776
Q ss_pred HHHhHHh
Q psy3807 470 GLGFPTL 476 (483)
Q Consensus 470 ~~~~~~l 476 (483)
..+.=.+
T Consensus 146 ~~lgQll 152 (412)
T PF01770_consen 146 SLLGQLL 152 (412)
T ss_pred HHHHHHH
Confidence 6654433
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=77.57 E-value=85 Score=31.76 Aligned_cols=38 Identities=26% Similarity=0.229 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHH
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFI 390 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i 390 (483)
.....++..++..++.+.+.+|+|-+...++.-+++.+
T Consensus 308 ~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 308 FSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34455666666777778999999988776655444444
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=75.51 E-value=92 Score=31.17 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=27.9
Q ss_pred ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHh
Q psy3807 435 GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGF 473 (483)
Q Consensus 435 ~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~ 473 (483)
++....+..+..+++.|..+-.+....-.+|-.+++.+.
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667778888888888887777777777766653
No 275
>KOG2881|consensus
Probab=74.61 E-value=55 Score=29.65 Aligned_cols=34 Identities=24% Similarity=0.143 Sum_probs=21.8
Q ss_pred HHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHH
Q psy3807 358 GAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIF 391 (483)
Q Consensus 358 ~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~ 391 (483)
.++..+..+-+-.++.|+.-|++.++|..++.+.
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 4444444444557888998888877776555443
No 276
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=73.58 E-value=58 Score=33.45 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=35.3
Q ss_pred chhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCC-CCcchh----HHHHHHHHHHHHHHHhHHHHhhc
Q psy3807 300 SMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGL-SEKTAK----FTTIGIGAVMVTMTIISIPLMDR 374 (483)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~----~~~~~~~~~~~~g~~~~~~l~dr 374 (483)
--.|+||.|++. .+++.++....|+.... ....++...|. ++...+ .......+.+.++...++.+...
T Consensus 250 vhgDVFR~P~~~--~lls~lvG~G~Qll~~~----~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 250 VHGDVFRPPKHP--MLLSALVGTGIQLLFMA----LVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred hhHHHhcCcCCc--hHHHhHhcchhhhhHHH----HHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 446889887753 44555555555543322 22233333332 222222 22333345555666666666666
Q ss_pred cCCh
Q psy3807 375 MGRR 378 (483)
Q Consensus 375 ~grr 378 (483)
++.|
T Consensus 324 ~~g~ 327 (521)
T PF02990_consen 324 FGGK 327 (521)
T ss_pred cCCC
Confidence 6543
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=72.48 E-value=1.1e+02 Score=30.60 Aligned_cols=150 Identities=9% Similarity=-0.045 Sum_probs=74.5
Q ss_pred HHHHhHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccch
Q psy3807 331 AVFYYSTALFESS-GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQ 409 (483)
Q Consensus 331 ~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 409 (483)
...+-.|.++.+. .-+..-.....+...+..++.+...|..+||..|.+....+.+..-++..+........-......
T Consensus 20 ~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~ 99 (432)
T PF06963_consen 20 MWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS 99 (432)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 3344555566554 223333444555667777788888889999999988876665544333322222211110000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhc---ccc-ccc--ccee-eccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 410 EMIDWMSYLSVISILGFVVFFA---VGP-GSI--PWMI-TAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~--~~~~-~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
...++..........++...-. .+. ..+ -|+. .+|- +++......+...-+-.+..+++|.+.+.+++..+
T Consensus 100 ~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~-~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s 177 (432)
T PF06963_consen 100 SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGG-DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFAS 177 (432)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 0011112222221111111111 111 011 1211 1121 44555677777777778899999999999987654
No 278
>KOG3574|consensus
Probab=72.01 E-value=14 Score=35.71 Aligned_cols=69 Identities=17% Similarity=0.314 Sum_probs=39.0
Q ss_pred chHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhh-----ccCChHHHHh
Q psy3807 311 RKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMD-----RMGRRTLHLY 383 (483)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~d-----r~grr~~l~~ 383 (483)
++.+....++...|..- ..+..-.|.+++.-|.|-.+......... -.--.+++..++| |+||||.-++
T Consensus 30 ~~~illLl~LYllQGiP--~GL~~~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIP--LGLIGAIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhhHHHHHHHHHHcCCc--hhHhhhhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceee
Confidence 33455555666655432 23334778999876666544433332211 1222466777888 9999877654
No 279
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=71.75 E-value=12 Score=34.06 Aligned_cols=63 Identities=16% Similarity=0.157 Sum_probs=46.4
Q ss_pred HHHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCCchHhhHHHHHHHHHHHHHHH
Q psy3807 161 FFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQI 230 (483)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~~~~~~~g~~~~~~ 230 (483)
.+.+.+++.+|++.++. ..+.....+|..+| ++.|.+.|++|......+......+|...-..
T Consensus 23 ~yS~~Lk~~l~~sq~~l------~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQL------NTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred hhhHHHHHHhCCCHHHH------HHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 45677888887776555 57777788888775 88899999999977777666666666654443
No 280
>KOG1277|consensus
Probab=68.12 E-value=33 Score=33.64 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=12.4
Q ss_pred hhhhccCCCchHHHHHHHHHHhhhc
Q psy3807 302 SELLCSSTLRKPLIIGIVMQLSQQF 326 (483)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (483)
.|+||-|+++ .+....+....|+
T Consensus 283 gDVFR~p~~~--~Lfsa~lGsG~Ql 305 (593)
T KOG1277|consen 283 GDVFRFPSHP--LLFSAVLGSGAQL 305 (593)
T ss_pred cccccCCCcc--HHHHHHhccccch
Confidence 4678766654 3344444444444
No 281
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=66.69 E-value=1.4e+02 Score=30.41 Aligned_cols=117 Identities=13% Similarity=0.075 Sum_probs=71.1
Q ss_pred HHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhh-----------hH------HHHHHHH
Q psy3807 360 VMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMID-----------WM------SYLSVIS 422 (483)
Q Consensus 360 ~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------~~------~~~~~~~ 422 (483)
+.++...+..+++++++|+++.-+..........++++..+.. .+..|.+.. .. +.+....
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~--~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~sl 148 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPN--RDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSL 148 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhc--hhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 3455566677899999999987766555555555555543211 111111100 00 0111112
Q ss_pred HHHHHHHhc-cccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 423 ILGFVVFFA-VGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 423 ~~~~~~~~~-~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+.+..-.++ ....-+.|.+++|+.+.+.-.+-.++....++++.+++..+...+.+
T Consensus 149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222 22233468999999999999999999999999999999988777765
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=66.22 E-value=34 Score=31.23 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=28.5
Q ss_pred ccccccchhhhhHHHHHHHHHHHHhcccc-c--cCCCCCcchhhc
Q psy3807 9 LNLRGGLGTVNQLAVTLGLLISQILGIEP-I--LGTDEGWPVLLD 50 (483)
Q Consensus 9 ~~~RG~~~~~~~~~~~~G~~l~~~~~~~~-~--~~~~~~Wr~~~~ 50 (483)
.|+|+.+..+...+.++|.+++.+.-... . ......|++.+.
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~s 45 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILS 45 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHH
Confidence 37899999999999999999986542211 0 011225998665
No 283
>PRK03612 spermidine synthase; Provisional
Probab=65.57 E-value=1.5e+02 Score=30.40 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 452 PAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 452 ~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+...|-..+...+|+++++.+++.++-
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 567788888889999999888887664
No 284
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=61.66 E-value=18 Score=30.00 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=44.4
Q ss_pred HhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCc
Q psy3807 371 LMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGP 450 (483)
Q Consensus 371 l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 450 (483)
++||+-||..+..|.- +++++..+..++..... ...+...++. ++....+|+.|.-.+.|-+.+-.-.++.
T Consensus 57 Vs~RM~rRm~~~~GiP-~~lG~~~f~~~y~l~~~-----~~~dvP~~~~---~~~S~~~Fg~gllGisYGilSaSWD~~r 127 (153)
T PF11947_consen 57 VSNRMLRRMAVFVGIP-TALGVAVFVVFYYLKSR-----QIVDVPPWAV---LLVSLVFFGLGLLGISYGILSASWDPER 127 (153)
T ss_pred HHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHhc-----cccccCchHH---HHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 5788888877766643 23333333333332211 1111122222 2222333333333445555555556666
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy3807 451 RPAAMSIAVLVNWIANFV 468 (483)
Q Consensus 451 R~~~~g~~~~~~~~~~~~ 468 (483)
.|+..|+-.+--+++...
T Consensus 128 ~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 128 EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CCCcccHHHHHHhHHHHH
Confidence 788888888777765543
No 285
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=55.40 E-value=19 Score=34.99 Aligned_cols=96 Identities=14% Similarity=0.011 Sum_probs=55.1
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCC---chhHHH
Q psy3807 379 TLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQG---PRPAAM 455 (483)
Q Consensus 379 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~R~~~~ 455 (483)
+.+++|.++.+++.+++.+....... ..........+.+.+...+ ..+.=|....+.+|.++.+ .|.+..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~------~~~~~~~~~~~gL~lia~G-~G~~K~ni~~~~~dq~~~~~~~~~~~~F 74 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL------PSGIQLGLFYIGLALIAVG-TGGIKPNISPFGADQYDEDDDSRRDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------------CHHHHHHHHHHHH-HHCCHHHHHHHHHHCSSTTTTTHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh------hhhHHHHHHHHHHHHHHhc-cccccccHHHHHHHHhcccchhhhhhhH
Confidence 45667778888888776655432200 0011112222222222222 2233355567778888654 577788
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhcC
Q psy3807 456 SIAVLVNWIANFVVGLGFPTLNLPYR 481 (483)
Q Consensus 456 g~~~~~~~~~~~~~~~~~~~l~~~~g 481 (483)
......-++|+.++....+++.+.+|
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~ 100 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYG 100 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-
T ss_pred HHHHHHHhhhhHhhcccchhhccccc
Confidence 88899999999999999999886654
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=54.62 E-value=2.5e+02 Score=28.61 Aligned_cols=39 Identities=26% Similarity=0.266 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHH
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIF 391 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~ 391 (483)
.....++..++..++++.+.+|+|-+...++.-+++.++
T Consensus 324 ~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 324 FSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 445557777777788889999999887776654444443
No 287
>KOG4830|consensus
Probab=50.36 E-value=31 Score=31.52 Aligned_cols=48 Identities=21% Similarity=0.195 Sum_probs=36.8
Q ss_pred HhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHH---------HHhhccCChHHH
Q psy3807 334 YYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISI---------PLMDRMGRRTLH 381 (483)
Q Consensus 334 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~---------~l~dr~grr~~l 381 (483)
.|.-.++++.|.++.+....++...+...+.+++.| +..||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 455566788899998888888888888888888775 346899998643
No 288
>KOG1278|consensus
Probab=47.58 E-value=1.1e+02 Score=31.05 Aligned_cols=71 Identities=14% Similarity=0.209 Sum_probs=30.7
Q ss_pred ccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHhHHHHhhc
Q psy3807 298 KISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGL-SEKTAKFTTIGIGAVMVTMTIISIPLMDR 374 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~~g~~~~~~l~dr 374 (483)
+..-.|+||.|+... ++..++....|+.+ +...+.++.-+|+ ++..-+..+...-+..++..+++|+.+-|
T Consensus 314 KLVhGDVFR~P~~~~--lLsv~vGsGvQ~l~----M~~vti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~r 385 (628)
T KOG1278|consen 314 KLVHGDVFRPPRNSM--LLSVLVGSGVQLLG----MILVTIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSAR 385 (628)
T ss_pred EEeecccccCCCCCe--EEEEEeccChhhhH----HHHHHHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhh
Confidence 334568887776533 23233333333222 2223344444443 44443443333334444444444444443
No 289
>KOG1479|consensus
Probab=47.21 E-value=1.1e+02 Score=30.09 Aligned_cols=272 Identities=10% Similarity=-0.024 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccCC--------------------------------chHhhHHHHHHHHHHHH
Q psy3807 180 KIFYSVAVSIFAIGGMLGGFSGGSIADKFGR--------------------------------GGLGTVNQLAVTLGLLI 227 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR--------------------------------~~~~~~~~~~~~~g~~~ 227 (483)
....+...+...+-..+...+.-.-.|+.+. .........+.++++.+
T Consensus 84 ~~~~~~~l~~~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l 163 (406)
T KOG1479|consen 84 RTRVGYLLSLIAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTL 163 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHH
Q ss_pred HHHH---ccccccCCCCchhHHHHHHHHHHHHhccCCChHHHHHHHHHHhCCcchHHHH-HHHHHHHHHhhcccccchhh
Q psy3807 228 SQIL---GIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDI-EEMRVEQIAQQSESKISMSE 303 (483)
Q Consensus 228 ~~~~---~~~~~~~~~~~w~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 303 (483)
..++ .-....+...+--..|.+..+..++.+.-....+..+..+..+.+...++.. .+.+.+.+.+.++...+.++
T Consensus 164 ~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 243 (406)
T KOG1479|consen 164 TSLLRILTKAAFSDSRTSALIYFITSTVILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGIESDSSLSNEDDSLWD 243 (406)
T ss_pred HHHHHHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcchHHHHHhhhcccccccccccccccccccccccchHHH
Q ss_pred hhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCCCcchhHHHHH-HHHHHHHHHHhHHHHhhccCChHHHH
Q psy3807 304 LLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIG-IGAVMVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~-~~~~~~~g~~~~~~l~dr~grr~~l~ 382 (483)
++ ++.+...+-.++..+. ....+.-+......+...+.--....... .++..++|.....+.-++=.|+....
T Consensus 244 i~--~k~~~~~~~i~lvy~V----TLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~ 317 (406)
T KOG1479|consen 244 IF--KKIKDLAFNIFLVYFV----TLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIP 317 (406)
T ss_pred HH--HHHHHHhhchheeeee----eeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHH
Q ss_pred hhhHHHHHHHHH------HHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHH
Q psy3807 383 YGLGGMFIFSIF------ITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMS 456 (483)
Q Consensus 383 ~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g 456 (483)
...=...+-.+. ........ ...+.+.......+.=..++...++++..|++.+-.+-.
T Consensus 318 v~lR~lfiPlF~~cn~~~~~v~~~~~---------------~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~ 382 (406)
T KOG1479|consen 318 VLLRLLFIPLFLLCNYPPLPVVFESD---------------GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGN 382 (406)
T ss_pred HHHHHHHHHHHHHhccCCCCceecCc---------------hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3807 457 IAVLVNWIANFVVGLG 472 (483)
Q Consensus 457 ~~~~~~~~~~~~~~~~ 472 (483)
+...+-..|-+.+..+
T Consensus 383 ~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 383 LMVFFLVGGLALGSLL 398 (406)
T ss_pred HHHHHHHHHHHHhhHH
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=47.14 E-value=89 Score=31.68 Aligned_cols=15 Identities=27% Similarity=0.406 Sum_probs=10.1
Q ss_pred HHhhccCChHHHHhh
Q psy3807 370 PLMDRMGRRTLHLYG 384 (483)
Q Consensus 370 ~l~dr~grr~~l~~~ 384 (483)
..+.|+||||..++-
T Consensus 62 ~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 62 VYSKRIGRRKSWIIP 76 (544)
T ss_pred hcccccCCcchhhhH
Confidence 334578999877653
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.54 E-value=54 Score=25.19 Aligned_cols=29 Identities=14% Similarity=-0.078 Sum_probs=18.1
Q ss_pred HHHHHHhHHHHhhcc-CChHHHHhhhHHHH
Q psy3807 361 MVTMTIISIPLMDRM-GRRTLHLYGLGGMF 389 (483)
Q Consensus 361 ~~~g~~~~~~l~dr~-grr~~l~~~~~~~~ 389 (483)
+++.....||+.||+ |.+++-++.+++..
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 344445667888986 67777665544433
No 292
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=40.96 E-value=2.7e+02 Score=24.96 Aligned_cols=22 Identities=0% Similarity=-0.041 Sum_probs=12.6
Q ss_pred HHHHHHhHHHHhhccCChHHHH
Q psy3807 361 MVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 361 ~~~g~~~~~~l~dr~grr~~l~ 382 (483)
..+.-.+.|++.-|++.++...
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~~ 201 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWII 201 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchHH
Confidence 4555555666666666555543
No 293
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.42 E-value=87 Score=24.09 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=36.4
Q ss_pred cchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHH
Q psy3807 348 KTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIF 394 (483)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~ 394 (483)
.+.+-....++-+.++.+++.++.+|+....+.=.+|..++.++..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 46677888899999999999999999988766666666555555433
No 294
>KOG4332|consensus
Probab=37.63 E-value=9.9 Score=34.82 Aligned_cols=43 Identities=19% Similarity=0.180 Sum_probs=29.3
Q ss_pred HHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHH
Q psy3807 339 LFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLH 381 (483)
Q Consensus 339 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 381 (483)
+.+..|+...+.+...+.-....++...+.+-++||-|||+.-
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac 105 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC 105 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce
Confidence 3455677776766665554445556666778899999999653
No 295
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=35.60 E-value=94 Score=28.10 Aligned_cols=34 Identities=24% Similarity=0.551 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCCchHhhHH
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVN 217 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~ 217 (483)
++..+...++..++.++.|.++||+||+......
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 75 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIG 75 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHH
Confidence 6888888999999999999999999997444433
No 296
>PRK02237 hypothetical protein; Provisional
Probab=34.49 E-value=1.4e+02 Score=23.08 Aligned_cols=45 Identities=11% Similarity=0.049 Sum_probs=34.9
Q ss_pred chhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHH
Q psy3807 349 TAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSI 393 (483)
Q Consensus 349 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~ 393 (483)
+.+-....++-+.++.+++.++.+|+...-+.=.+|..++.++..
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~ 101 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMA 101 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHH
Confidence 467788889999999999999999998776666666655555543
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=33.09 E-value=12 Score=35.52 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=2.3
Q ss_pred ccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy3807 435 GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLG 472 (483)
Q Consensus 435 ~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 472 (483)
.++...+.++..+++.|..+-.+....-.+|-.+++.+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888888777777766666666554
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=30.42 E-value=2.5e+02 Score=25.66 Aligned_cols=38 Identities=18% Similarity=0.017 Sum_probs=20.9
Q ss_pred HHHHhhhhhccccCCchHhhHHHHHHHHHHHHHHHHcc
Q psy3807 196 LGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGI 233 (483)
Q Consensus 196 ig~~~~g~l~dr~GR~~~~~~~~~~~~~g~~~~~~~~~ 233 (483)
.|....-.+.+++|-+....+.+....+.+....-.+.
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGl 104 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGL 104 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhcee
Confidence 45556666777777666666555544444433333333
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=30.09 E-value=6.1e+02 Score=25.85 Aligned_cols=162 Identities=12% Similarity=0.028 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHhhhcchHHHHHHhHHHHHhhc----CCCCcchhHHHHHHHH-HHHHHHHhHHHHhhccCChHHHHhhh
Q psy3807 311 RKPLIIGIVMQLSQQFSGINAVFYYSTALFESS----GLSEKTAKFTTIGIGA-VMVTMTIISIPLMDRMGRRTLHLYGL 385 (483)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~~~~-~~~~g~~~~~~l~dr~grr~~l~~~~ 385 (483)
++.++...++.++ ..+++..-..+++. ...+.....+-...-+ +.++..++..++.+++.|+++.-+-+
T Consensus 26 ~~kflpl~Ll~f~------I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFC------ILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHH------HHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhhhhh-----HH------------HHHHHHHHHHHHHhccccccccceeeccccCC
Q psy3807 386 GGMFIFSIFITISLLIKEFFGFVQEMIDW-----MS------------YLSVISILGFVVFFAVGPGSIPWMITAELFSQ 448 (483)
Q Consensus 386 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 448 (483)
.....+.++++...+..+..-+.+..... .+ |.........-.-.+....-+.|..+.|+...
T Consensus 100 ~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~ 179 (509)
T COG3202 100 GFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTI 179 (509)
T ss_pred HHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhHHhhh
Q psy3807 449 GPRPAAMSIAVLVNWIANFVVGLGFPTLNL 478 (483)
Q Consensus 449 ~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 478 (483)
+.-.+-.++.+..++++..++..+...+.+
T Consensus 180 ~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 180 EEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
No 300
>PF04120 Iron_permease: Low affinity iron permease ; InterPro: IPR007251 Although originally identified as a low-affinity iron(II) permease [, ], Fet4 has since been shown to import several other transition metal ions, including copper [, ] and zinc []. Copper, cobalt, and cadmium inhibit Fet4 [, ]. Fet4 is an integral protein of the plasma membrane [, ]. FET4 is not essential, not even in fet3 fet4 double mutants []. Over expression of FET4 improves growth under alkaline conditions []. Transcription of FET4 is induced by Aft1 in response to low levels of iron [, , ] or by Zap1 in response to low zinc [, ], but not in response to low copper []. When the high-affinity iron permease component Fet3 is deleted, FET4 is induced by the addition of copper, zinc, cobalt, or manganese []. It is also induced under anaerobic conditions [, , ] and repressed by Rox1 in aerobic conditions [, ]. Rox1 attenuates the activation of FET4 by Aft1 or Zap1 []. ; GO: 0055085 transmembrane transport
Probab=27.32 E-value=3.4e+02 Score=21.99 Aligned_cols=11 Identities=9% Similarity=0.619 Sum_probs=5.7
Q ss_pred CCchhHHHHHH
Q psy3807 240 DEGWPVLLAML 250 (483)
Q Consensus 240 ~~~w~~~~~~~ 250 (483)
...|+.+.-..
T Consensus 38 sdtWQLviNt~ 48 (132)
T PF04120_consen 38 SDTWQLVINTA 48 (132)
T ss_pred cchHHHHHccH
Confidence 44576655433
No 301
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=24.59 E-value=6.4e+02 Score=24.28 Aligned_cols=42 Identities=14% Similarity=0.008 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCCchHhhHHHHHHHHHH
Q psy3807 184 SVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGL 225 (483)
Q Consensus 184 ~~~~~~~~~~~~ig~~~~g~l~dr~GR~~~~~~~~~~~~~g~ 225 (483)
.+.-...++|..++..+.+++-|++|.....++.+.++.++.
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~ 116 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLAL 116 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHH
Confidence 455556666777777777777777666444444444444333
No 302
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=22.89 E-value=4.7e+02 Score=22.14 Aligned_cols=24 Identities=8% Similarity=0.231 Sum_probs=13.0
Q ss_pred HHHHHHHHhHHHHhhccCChHHHH
Q psy3807 359 AVMVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 359 ~~~~~g~~~~~~l~dr~grr~~l~ 382 (483)
+...+.-.+.|++.-|++.++...
T Consensus 124 ~~~~~~L~ilG~~~a~~s~~~~~~ 147 (169)
T TIGR00267 124 LLTLIALLVLGVYLGRISRENILI 147 (169)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHH
Confidence 344444455566666666555543
No 303
>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.
Probab=22.00 E-value=5.9e+02 Score=22.94 Aligned_cols=31 Identities=16% Similarity=-0.022 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhHHHHhhccCChHHHHhhhH
Q psy3807 356 GIGAVMVTMTIISIPLMDRMGRRTLHLYGLG 386 (483)
Q Consensus 356 ~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~ 386 (483)
...++.+.-..+.-+++.|+|.-..+.++..
T Consensus 131 ~~~i~sl~~i~l~l~ls~~~g~~~si~ig~~ 161 (241)
T TIGR03732 131 LIWLTSLWQIPLCLFLARKFGMFVSILVNLV 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455566677878866555555544
No 304
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.45 E-value=4.4e+02 Score=21.68 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=21.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHH
Q psy3807 344 GLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLH 381 (483)
Q Consensus 344 g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l 381 (483)
|++..+......++++.-+++-+++.++.|++++-..+
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~ 105 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELI 105 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 44444444555555666666666666666666654433
No 305
>TIGR03733 lanti_perm_MutG lantibiotic protection ABC transporter permease subunit, MutG family. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene modeled separate by TIGR03732, while in some species only one subunit is found.
Probab=20.74 E-value=6.3e+02 Score=22.79 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHH
Q psy3807 353 TTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFS 392 (483)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~ 392 (483)
.....-++.+.-..+.-+++.|+|....+.+|......+.
T Consensus 134 ~~~~l~~~sl~~~~l~l~ls~~~g~~~si~ig~~g~l~~~ 173 (248)
T TIGR03733 134 AALLLIIGSLFLYIIHLFVSFAFGMGASIGIGIVGTLMAA 173 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 3344455666667777789999998777777665554433
No 306
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=20.48 E-value=6.1e+02 Score=22.55 Aligned_cols=24 Identities=8% Similarity=0.070 Sum_probs=13.9
Q ss_pred HHHHHHHHhHHHHhhccCChHHHH
Q psy3807 359 AVMVTMTIISIPLMDRMGRRTLHL 382 (483)
Q Consensus 359 ~~~~~g~~~~~~l~dr~grr~~l~ 382 (483)
+...+.-.+.|.+.-|+++++...
T Consensus 172 ~~~~~aL~~~G~~~a~~~~~~~~~ 195 (218)
T cd02432 172 IATLLALALTGYVSARLGGASVLR 195 (218)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHH
Confidence 345555556666666666655543
No 307
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=20.36 E-value=4e+02 Score=25.97 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=0.0
Q ss_pred chhhhhHHHHHHHHHHHHhccccccCCCCCcchhhccccccccccccccccccchhHHHHHHHHHhhccCCCCCcccHHH
Q psy3807 15 LGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEE 94 (483)
Q Consensus 15 ~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~~~sp~~l~~~~~~~~~~f~~~~~~~a~~~~~~~~~~~e~~~~~~~~ 94 (483)
..+....+...|.+++..++ +|+++|++.+. ...+++.++..++
T Consensus 160 g~a~AT~Glv~G~liGgpi~------------------~~lirk~~~~~------------------~~~~~~~~~~~~~ 203 (368)
T PF03616_consen 160 GMAAATFGLVVGGLIGGPIA------------------NWLIRKGKLKP------------------KKEPDELKEYLRK 203 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------HHHHHcCCCCC------------------CCccccccccccc
Q ss_pred HHhhhccCCCchhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccC
Q psy3807 95 IVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDM 174 (483)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (483)
..++-+..+..+......-..........|+ ++...+.+ .+...
T Consensus 204 ~~~~~~~~~~~t~~~~i~~l~~i~i~~~~G~-----------------------------------~i~~~l~~-~~~~l 247 (368)
T PF03616_consen 204 GEERPSAGRPITSSSLIEHLALILIAIGLGY-----------------------------------IISALLKK-IGLTL 247 (368)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHH-cCcCC
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy3807 175 TDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR 210 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR 210 (483)
.. +++.+++..+.-.+.||.++
T Consensus 248 P~--------------f~~ami~g~ivrn~~~~~~~ 269 (368)
T PF03616_consen 248 PL--------------FVGAMIVGIIVRNILDKTGK 269 (368)
T ss_pred ch--------------HHHHHHHHHHHHHHHHHhCc
Done!