Query psy381
Match_columns 70
No_of_seqs 147 out of 1033
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 18:00:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vch_A Hydroquinone glucosyltr 99.9 1.4E-21 4.6E-26 124.2 7.1 69 1-69 363-438 (480)
2 3hbf_A Flavonoid 3-O-glucosylt 99.8 2.6E-21 8.8E-26 122.8 7.6 69 1-69 351-423 (454)
3 2c1x_A UDP-glucose flavonoid 3 99.8 5.6E-21 1.9E-25 120.8 7.5 69 1-69 349-421 (456)
4 2pq6_A UDP-glucuronosyl/UDP-gl 99.8 8E-21 2.7E-25 120.5 7.8 68 1-69 377-448 (482)
5 2o6l_A UDP-glucuronosyltransfe 99.8 3.3E-20 1.1E-24 103.8 7.1 69 1-69 92-160 (170)
6 2acv_A Triterpene UDP-glucosyl 99.8 4.5E-20 1.5E-24 116.8 7.7 69 1-69 356-432 (463)
7 4amg_A Snogd; transferase, pol 99.8 7.1E-20 2.4E-24 112.3 6.5 65 1-69 310-374 (400)
8 1rrv_A Glycosyltransferase GTF 99.8 6.1E-19 2.1E-23 109.4 7.6 68 1-69 308-375 (416)
9 1iir_A Glycosyltransferase GTF 99.8 9.4E-19 3.2E-23 108.6 7.7 68 1-69 307-374 (415)
10 2iya_A OLEI, oleandomycin glyc 99.8 3.3E-19 1.1E-23 110.6 5.4 69 1-69 327-395 (424)
11 3h4t_A Glycosyltransferase GTF 99.8 1.7E-18 5.7E-23 107.5 7.6 68 1-69 290-357 (404)
12 2yjn_A ERYCIII, glycosyltransf 99.8 1.2E-18 4.3E-23 108.7 6.2 69 1-69 341-409 (441)
13 2p6p_A Glycosyl transferase; X 99.8 1.5E-18 5E-23 106.3 5.8 69 1-69 285-353 (384)
14 3rsc_A CALG2; TDP, enediyne, s 99.7 5E-18 1.7E-22 104.7 6.7 69 1-69 319-387 (415)
15 4fzr_A SSFS6; structural genom 99.7 6.8E-18 2.3E-22 103.9 5.2 69 1-69 306-374 (398)
16 3ia7_A CALG4; glycosysltransfe 99.7 2.2E-17 7.4E-22 101.1 6.0 69 1-69 303-372 (402)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.7 3.1E-17 1.1E-21 100.6 6.4 69 1-69 292-362 (391)
18 3s2u_A UDP-N-acetylglucosamine 99.7 5.4E-17 1.9E-21 100.0 6.3 69 1-69 258-330 (365)
19 2iyf_A OLED, oleandomycin glyc 99.7 6.5E-17 2.2E-21 100.2 6.1 69 1-69 305-373 (430)
20 3otg_A CALG1; calicheamicin, T 99.6 7.6E-16 2.6E-20 94.7 6.6 69 1-69 314-382 (412)
21 3oti_A CALG3; calicheamicin, T 99.6 4.4E-16 1.5E-20 95.9 2.8 65 1-69 305-371 (398)
22 2jzc_A UDP-N-acetylglucosamine 99.4 5.7E-14 2E-18 82.6 3.1 55 1-60 138-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.2 4.4E-11 1.5E-15 72.3 5.3 65 2-68 261-328 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.0 4.4E-10 1.5E-14 67.9 4.5 43 1-44 231-273 (282)
25 2xci_A KDO-transferase, 3-deox 98.2 1.3E-06 4.3E-11 54.0 3.5 60 5-69 292-351 (374)
26 1v4v_A UDP-N-acetylglucosamine 98.2 4.3E-06 1.5E-10 50.7 5.7 55 7-68 285-339 (376)
27 1vgv_A UDP-N-acetylglucosamine 98.1 3.7E-06 1.3E-10 51.0 4.0 55 7-68 293-347 (384)
28 2iw1_A Lipopolysaccharide core 98.0 2.1E-05 7.3E-10 47.3 5.8 61 3-68 282-342 (374)
29 3beo_A UDP-N-acetylglucosamine 97.9 2.9E-05 9.8E-10 46.9 6.1 57 6-69 292-348 (375)
30 3ot5_A UDP-N-acetylglucosamine 97.9 1.4E-05 4.9E-10 49.9 4.8 53 9-68 314-366 (403)
31 2f9f_A First mannosyl transfer 97.9 2.5E-05 8.6E-10 43.3 4.8 55 5-66 111-165 (177)
32 2gek_A Phosphatidylinositol ma 97.8 6E-05 2.1E-09 45.8 5.7 58 5-68 297-354 (406)
33 2x6q_A Trehalose-synthase TRET 97.7 4.6E-05 1.6E-09 46.8 4.7 57 4-68 328-384 (416)
34 3dzc_A UDP-N-acetylglucosamine 97.7 2.2E-05 7.5E-10 48.8 3.3 57 6-69 317-373 (396)
35 2bfw_A GLGA glycogen synthase; 97.7 5.5E-05 1.9E-09 42.2 4.6 57 5-68 129-186 (200)
36 3okp_A GDP-mannose-dependent a 97.7 3.8E-05 1.3E-09 46.4 4.0 59 3-68 291-349 (394)
37 2vsy_A XCC0866; transferase, g 97.7 5.9E-05 2E-09 48.1 4.9 63 3-68 464-527 (568)
38 3c48_A Predicted glycosyltrans 97.7 8.5E-05 2.9E-09 45.7 5.0 58 5-68 339-396 (438)
39 4hwg_A UDP-N-acetylglucosamine 97.6 0.00014 4.9E-09 45.3 5.6 55 7-68 293-347 (385)
40 3fro_A GLGA glycogen synthase; 97.5 0.00012 4E-09 44.7 4.5 57 5-68 344-401 (439)
41 2jjm_A Glycosyl transferase, g 97.5 4E-05 1.4E-09 46.7 2.2 60 3-68 296-355 (394)
42 2r60_A Glycosyl transferase, g 97.4 0.00055 1.9E-08 43.0 5.9 58 5-68 372-429 (499)
43 1rzu_A Glycogen synthase 1; gl 97.3 0.00043 1.5E-08 43.3 5.0 58 5-68 379-448 (485)
44 2qzs_A Glycogen synthase; glyc 97.2 0.00052 1.8E-08 42.9 4.9 58 5-68 380-449 (485)
45 3q3e_A HMW1C-like glycosyltran 97.2 0.00067 2.3E-08 45.1 5.5 63 3-68 529-593 (631)
46 3oy2_A Glycosyltransferase B73 97.2 0.00039 1.3E-08 42.5 3.8 57 5-68 287-360 (413)
47 4gyw_A UDP-N-acetylglucosamine 97.0 0.0012 4.1E-08 44.2 5.2 62 2-66 609-671 (723)
48 3qhp_A Type 1 capsular polysac 97.0 0.00019 6.5E-09 38.9 0.9 58 5-69 88-146 (166)
49 2x0d_A WSAF; GT4 family, trans 96.9 0.00047 1.6E-08 43.1 2.3 56 6-68 329-384 (413)
50 2hy7_A Glucuronosyltransferase 96.4 0.0021 7.2E-08 39.9 2.8 48 6-65 299-354 (406)
51 3s28_A Sucrose synthase 1; gly 96.3 0.0061 2.1E-07 41.6 4.8 58 5-68 678-739 (816)
52 2iuy_A Avigt4, glycosyltransfe 96.3 0.0041 1.4E-07 37.1 3.5 51 5-62 255-307 (342)
53 3rhz_A GTF3, nucleotide sugar 96.1 0.0077 2.6E-07 37.0 4.2 48 6-61 255-302 (339)
54 2iz6_A Molybdenum cofactor car 92.7 0.73 2.5E-05 25.9 6.4 55 3-62 116-173 (176)
55 3nb0_A Glycogen [starch] synth 89.0 1.5 5.1E-05 30.0 6.1 19 6-24 533-551 (725)
56 1uqt_A Alpha, alpha-trehalose- 88.8 0.6 2E-05 30.0 4.0 47 6-63 366-419 (482)
57 3lqk_A Dipicolinate synthase s 87.2 0.76 2.6E-05 26.4 3.4 54 11-64 119-187 (201)
58 3mcu_A Dipicolinate synthase, 86.7 0.93 3.2E-05 26.2 3.6 56 10-65 116-186 (207)
59 3vue_A GBSS-I, granule-bound s 85.9 2 7E-05 27.8 5.3 52 6-61 416-475 (536)
60 1rcu_A Conserved hypothetical 84.0 1.5 5E-05 25.1 3.6 21 3-23 127-150 (195)
61 2gkg_A Response regulator homo 80.0 3.9 0.00013 20.0 4.5 47 14-63 79-125 (127)
62 1ydh_A AT5G11950; structural g 78.7 7.4 0.00025 22.5 5.9 55 2-60 113-187 (216)
63 1mvl_A PPC decarboxylase athal 77.7 3.7 0.00013 23.7 3.8 52 15-66 132-202 (209)
64 2i2c_A Probable inorganic poly 77.6 2.9 9.9E-05 24.7 3.5 45 3-63 43-93 (272)
65 3nhm_A Response regulator; pro 75.2 3.1 0.00011 20.8 2.8 48 15-65 77-124 (133)
66 1yt5_A Inorganic polyphosphate 71.5 4 0.00014 23.9 3.0 45 3-63 49-96 (258)
67 3t5t_A Putative glycosyltransf 68.4 7.9 0.00027 25.2 4.0 51 6-64 386-439 (496)
68 3to5_A CHEY homolog; alpha(5)b 65.3 13 0.00044 19.5 5.9 47 14-62 86-132 (134)
69 1p3y_1 MRSD protein; flavoprot 64.0 18 0.0006 20.5 5.6 52 12-63 112-186 (194)
70 3uqz_A DNA processing protein 63.9 17 0.00058 22.1 4.7 47 4-55 230-278 (288)
71 3grc_A Sensor protein, kinase; 63.8 5.3 0.00018 20.1 2.2 50 14-64 79-128 (140)
72 2rjn_A Response regulator rece 63.7 13 0.00045 19.0 5.0 50 14-65 78-128 (154)
73 1dcf_A ETR1 protein; beta-alph 62.9 13 0.00043 18.5 5.4 50 18-69 86-135 (136)
74 3tl4_X Glutaminyl-tRNA synthet 60.8 8 0.00027 22.0 2.7 23 35-62 109-131 (187)
75 1t35_A Hypothetical protein YV 59.1 22 0.00074 20.0 6.0 55 2-60 105-179 (191)
76 2qxy_A Response regulator; reg 56.3 18 0.0006 18.1 5.8 50 14-65 74-123 (142)
77 3qrx_B Melittin; calcium-bindi 54.9 3.2 0.00011 15.9 0.3 17 4-20 1-17 (26)
78 3gl9_A Response regulator; bet 54.8 18 0.00061 17.7 5.9 47 14-62 75-121 (122)
79 2qr3_A Two-component system re 53.3 20 0.00067 17.7 5.0 51 14-66 79-129 (140)
80 2an1_A Putative kinase; struct 52.8 11 0.00039 22.2 2.6 22 2-23 70-95 (292)
81 3eqz_A Response regulator; str 52.5 20 0.00068 17.6 4.6 52 14-66 73-128 (135)
82 3ilh_A Two component response 52.0 21 0.00072 17.7 6.1 52 14-67 91-143 (146)
83 3maj_A DNA processing chain A; 51.6 43 0.0015 21.2 6.0 50 4-58 251-302 (382)
84 2qsj_A DNA-binding response re 51.5 23 0.00078 18.0 4.3 50 14-65 77-126 (154)
85 3cg0_A Response regulator rece 50.4 22 0.00077 17.5 4.6 49 14-64 81-129 (140)
86 4e7p_A Response regulator; DNA 49.8 25 0.00084 17.8 5.8 50 14-65 93-142 (150)
87 3hdg_A Uncharacterized protein 49.7 23 0.00079 17.5 5.1 51 14-66 78-128 (137)
88 3qua_A Putative uncharacterize 49.1 14 0.00049 21.1 2.5 21 2-22 125-154 (199)
89 3jte_A Response regulator rece 47.8 26 0.00087 17.5 5.4 51 14-66 76-126 (143)
90 3b2n_A Uncharacterized protein 47.5 25 0.00087 17.3 6.1 51 14-66 76-126 (133)
91 3mm4_A Histidine kinase homolo 47.2 34 0.0012 18.7 5.0 49 14-65 150-198 (206)
92 3sbx_A Putative uncharacterize 46.9 17 0.00059 20.6 2.6 21 2-22 116-145 (189)
93 3lua_A Response regulator rece 46.8 27 0.00091 17.4 5.2 52 13-66 79-130 (140)
94 3hv2_A Response regulator/HD d 46.7 28 0.00097 17.7 5.7 49 14-64 85-134 (153)
95 3kcn_A Adenylate cyclase homol 46.6 28 0.00096 17.6 5.2 49 14-64 75-124 (151)
96 3f6c_A Positive transcription 46.6 26 0.00089 17.2 3.3 50 14-65 73-122 (134)
97 3qjg_A Epidermin biosynthesis 46.0 14 0.00047 20.7 2.1 31 11-41 106-143 (175)
98 1v95_A Nuclear receptor coacti 45.2 10 0.00035 20.3 1.4 43 18-60 11-56 (130)
99 2pju_A Propionate catabolism o 45.0 22 0.00075 20.6 2.9 22 2-24 70-91 (225)
100 1u0t_A Inorganic polyphosphate 43.9 15 0.00052 22.0 2.2 21 3-23 83-107 (307)
101 3kto_A Response regulator rece 43.9 30 0.001 17.1 4.9 49 14-64 79-127 (136)
102 3cnb_A DNA-binding response re 43.8 30 0.001 17.1 5.9 49 14-64 83-131 (143)
103 2q37_A OHCU decarboxylase; 2-O 43.6 43 0.0015 18.9 4.6 38 28-65 118-155 (181)
104 3cz5_A Two-component response 41.6 35 0.0012 17.2 5.0 49 14-64 78-126 (153)
105 1k68_A Phytochrome response re 40.9 33 0.0011 16.7 5.5 47 14-62 84-130 (140)
106 3zqu_A Probable aromatic acid 40.7 51 0.0017 18.9 4.9 33 10-42 126-162 (209)
107 2a33_A Hypothetical protein; s 40.3 25 0.00084 20.3 2.6 55 2-60 117-191 (215)
108 3hdv_A Response regulator; PSI 40.1 35 0.0012 16.8 6.2 51 14-66 80-130 (136)
109 2oa5_A Hypothetical protein BQ 40.1 20 0.00067 18.8 2.0 24 47-70 7-31 (110)
110 3h1g_A Chemotaxis protein CHEY 39.5 35 0.0012 16.7 6.6 47 15-63 81-127 (129)
111 3eul_A Possible nitrate/nitrit 39.2 39 0.0013 17.0 5.7 50 14-65 88-137 (152)
112 3afo_A NADH kinase POS5; alpha 39.0 24 0.00082 22.2 2.6 21 3-23 122-147 (388)
113 2qpq_A Protein BUG27; alpha/be 38.5 18 0.00063 21.6 2.0 19 51-69 244-262 (301)
114 2i4r_A V-type ATP synthase sub 38.5 35 0.0012 17.3 2.8 29 35-65 25-53 (102)
115 3klo_A Transcriptional regulat 38.4 40 0.0014 18.5 3.3 50 13-64 81-130 (225)
116 3o7i_A OHCU decarboxylase; lya 38.3 55 0.0019 18.6 4.7 37 28-64 127-163 (189)
117 4a3s_A 6-phosphofructokinase; 38.2 68 0.0023 19.6 4.8 60 2-61 172-238 (319)
118 2k7r_A Primosomal protein DNAI 37.9 22 0.00074 18.0 1.9 19 51-69 19-37 (106)
119 2dvz_A BUGE, putative exported 37.5 19 0.00066 21.7 2.0 19 51-69 257-275 (314)
120 3crn_A Response regulator rece 37.4 39 0.0013 16.6 5.5 50 14-65 74-123 (132)
121 1eiw_A Hypothetical protein MT 37.4 32 0.0011 17.7 2.6 48 9-62 61-109 (111)
122 1wek_A Hypothetical protein TT 37.3 28 0.00096 20.1 2.5 21 2-22 139-169 (217)
123 2f5x_A BUGD; periplasmic bindi 37.2 20 0.00067 21.6 2.0 19 51-69 253-271 (312)
124 2lnd_A De novo designed protei 37.0 41 0.0014 16.7 6.2 48 14-62 50-100 (112)
125 1qkk_A DCTD, C4-dicarboxylate 36.9 43 0.0015 16.9 5.2 49 14-64 74-122 (155)
126 3n53_A Response regulator rece 35.5 18 0.0006 18.1 1.4 51 14-66 75-125 (140)
127 2o70_A OHCU decarboxylase; URI 35.4 59 0.002 18.1 3.8 37 28-64 106-142 (174)
128 1sbz_A Probable aromatic acid 34.9 50 0.0017 18.7 3.3 32 10-41 109-144 (197)
129 1qzu_A Hypothetical protein MD 34.6 24 0.00083 20.1 2.0 29 14-42 131-166 (206)
130 2o8i_A AGR_C_4230P, hypothetic 34.4 60 0.0021 17.9 4.7 37 28-64 102-138 (165)
131 1weh_A Conserved hypothetical 34.3 30 0.001 19.0 2.3 20 2-22 105-134 (171)
132 3i42_A Response regulator rece 33.9 44 0.0015 16.1 2.8 48 14-64 76-123 (127)
133 1mvo_A PHOP response regulator 32.9 47 0.0016 16.2 3.9 49 14-64 74-122 (136)
134 2j48_A Two-component sensor ki 32.7 32 0.0011 16.0 2.1 44 14-62 74-117 (119)
135 3eod_A Protein HNR; response r 32.6 47 0.0016 16.1 5.4 50 15-66 79-129 (130)
136 1zco_A 2-dehydro-3-deoxyphosph 32.3 80 0.0027 18.6 5.2 48 14-61 191-256 (262)
137 3bo9_A Putative nitroalkan dio 32.2 85 0.0029 18.9 6.8 55 6-61 17-73 (326)
138 3bq9_A Predicted rossmann fold 31.8 36 0.0012 22.2 2.5 20 2-21 253-284 (460)
139 3t6k_A Response regulator rece 31.7 52 0.0018 16.3 6.2 48 15-64 78-125 (136)
140 2qai_A V-type ATP synthase sub 31.5 51 0.0017 17.0 2.7 33 34-66 15-49 (111)
141 2qzj_A Two-component response 31.3 53 0.0018 16.3 5.3 46 15-62 75-120 (136)
142 1qo0_D AMIR; binding protein, 31.2 63 0.0022 17.1 3.7 47 14-62 78-124 (196)
143 2wqk_A 5'-nucleotidase SURE; S 30.8 36 0.0012 20.0 2.3 18 6-23 110-127 (251)
144 2f62_A Nucleoside 2-deoxyribos 30.4 42 0.0015 18.4 2.4 18 5-22 85-105 (161)
145 2e6c_A 5'-nucleotidase SURE; S 30.3 37 0.0013 20.0 2.3 19 5-23 111-129 (244)
146 3qvs_A MIPS, MYO-inositol-1-ph 30.2 1.1E+02 0.0037 19.5 5.3 53 10-62 188-242 (392)
147 1pfk_A Phosphofructokinase; tr 30.1 98 0.0033 19.0 4.8 60 2-61 173-239 (320)
148 1j9j_A Stationary phase surviV 30.0 38 0.0013 20.0 2.3 19 5-23 110-128 (247)
149 2q5c_A NTRC family transcripti 29.9 14 0.00047 20.8 0.4 23 2-25 58-80 (196)
150 3zq4_A Ribonuclease J 1, RNAse 29.8 1.1E+02 0.0037 20.0 4.6 38 2-39 368-408 (555)
151 3o8o_A 6-phosphofructokinase s 29.4 43 0.0015 23.3 2.7 22 2-23 201-222 (787)
152 3snk_A Response regulator CHEY 29.3 56 0.0019 16.0 5.7 47 15-63 87-133 (135)
153 1kl7_A Threonine synthase; thr 29.3 97 0.0033 20.2 4.3 53 12-64 174-228 (514)
154 1k66_A Phytochrome response re 29.1 58 0.002 16.0 6.1 47 14-62 91-137 (149)
155 2phj_A 5'-nucleotidase SURE; S 29.0 41 0.0014 20.0 2.3 18 6-23 110-127 (251)
156 3l7i_A Teichoic acid biosynthe 29.0 7.4 0.00025 26.0 -0.9 53 6-62 625-682 (729)
157 1g63_A Epidermin modifying enz 28.8 54 0.0019 18.3 2.7 50 12-61 104-176 (181)
158 3o8o_B 6-phosphofructokinase s 28.2 45 0.0015 23.1 2.7 22 2-23 200-221 (766)
159 2hig_A 6-phospho-1-fructokinas 28.2 48 0.0016 21.7 2.7 22 2-23 275-297 (487)
160 1l5x_A SurviVal protein E; str 28.2 42 0.0014 20.2 2.3 20 5-24 109-128 (280)
161 4dad_A Putative pilus assembly 28.1 62 0.0021 16.0 5.6 48 14-63 94-141 (146)
162 4a7w_A Uridylate kinase; trans 27.7 92 0.0031 17.9 4.5 15 10-24 206-220 (240)
163 3cfy_A Putative LUXO repressor 27.7 63 0.0021 16.0 5.7 48 14-63 75-122 (137)
164 3a10_A Response regulator; pho 27.7 55 0.0019 15.4 2.5 44 14-61 72-115 (116)
165 2pln_A HP1043, response regula 27.3 62 0.0021 15.8 6.3 47 15-63 86-133 (137)
166 4f43_A Protelomerase; recombin 27.1 1E+02 0.0035 19.1 3.9 54 10-67 81-141 (320)
167 3lte_A Response regulator; str 26.9 61 0.0021 15.6 6.3 48 16-66 81-128 (132)
168 3sql_A Glycosyl hydrolase fami 26.9 1.4E+02 0.0048 19.8 4.8 49 7-62 296-344 (535)
169 2ov6_A V-type ATP synthase sub 26.8 31 0.0011 17.3 1.4 10 8-17 12-21 (101)
170 3opy_B 6-phosphofructo-1-kinas 26.4 51 0.0017 23.5 2.7 22 2-23 378-399 (941)
171 2zay_A Response regulator rece 26.2 68 0.0023 15.9 6.3 47 14-62 81-127 (147)
172 2ejb_A Probable aromatic acid 26.1 93 0.0032 17.4 4.0 32 11-42 114-149 (189)
173 2b7e_A PRE-mRNA processing pro 25.8 39 0.0013 15.6 1.5 16 52-67 23-39 (59)
174 2rdm_A Response regulator rece 25.8 65 0.0022 15.5 3.2 47 14-64 78-124 (132)
175 3s40_A Diacylglycerol kinase; 25.5 48 0.0016 19.7 2.2 21 3-23 71-97 (304)
176 2l69_A Rossmann 2X3 fold prote 25.5 76 0.0026 16.2 5.7 44 15-61 75-121 (134)
177 3o8l_A 6-phosphofructokinase, 25.4 55 0.0019 22.7 2.7 22 2-23 576-597 (762)
178 3hzh_A Chemotaxis response reg 25.0 76 0.0026 16.1 6.1 47 14-62 110-156 (157)
179 3b8i_A PA4872 oxaloacetate dec 24.9 30 0.001 20.9 1.3 31 15-45 204-234 (287)
180 3opy_A 6-phosphofructo-1-kinas 24.7 57 0.002 23.4 2.7 22 2-23 406-427 (989)
181 1dbw_A Transcriptional regulat 24.5 69 0.0024 15.4 6.5 48 14-63 74-121 (126)
182 1yio_A Response regulatory pro 24.1 74 0.0025 17.0 2.7 48 14-63 75-122 (208)
183 3h5i_A Response regulator/sens 24.0 55 0.0019 16.2 2.1 48 14-63 77-124 (140)
184 2r25_B Osmosensing histidine p 24.0 74 0.0025 15.6 5.8 47 15-63 81-127 (133)
185 2jk1_A HUPR, hydrogenase trans 24.0 75 0.0026 15.6 6.1 48 14-62 71-118 (139)
186 3o8o_B 6-phosphofructokinase s 23.6 62 0.0021 22.5 2.7 22 2-23 571-592 (766)
187 3o8l_A 6-phosphofructokinase, 23.6 46 0.0016 23.1 2.1 22 2-23 211-232 (762)
188 2h54_A Caspase-1; allosteric s 23.5 1E+02 0.0035 17.1 5.0 37 26-63 66-102 (178)
189 1psw_A ADP-heptose LPS heptosy 23.5 57 0.002 19.1 2.3 17 47-63 329-345 (348)
190 1x38_A Beta-D-glucan exohydrol 23.4 1.7E+02 0.0058 19.5 4.8 49 7-62 303-351 (602)
191 3rqi_A Response regulator prot 23.0 93 0.0032 16.3 4.0 48 13-62 77-124 (184)
192 2eo2_A Adult MALE hypothalamus 22.7 76 0.0026 15.2 3.0 29 29-58 32-60 (71)
193 3erv_A Putative C39-like pepti 22.7 85 0.0029 18.4 2.9 18 4-21 131-148 (236)
194 3gt7_A Sensor protein; structu 22.6 86 0.0029 15.8 6.4 47 14-62 80-126 (154)
195 1tmy_A CHEY protein, TMY; chem 22.6 74 0.0025 15.0 6.1 46 14-61 74-119 (120)
196 1mb3_A Cell division response 22.6 74 0.0025 15.1 4.8 47 15-63 75-121 (124)
197 2bon_A Lipid kinase; DAG kinas 22.2 46 0.0016 20.0 1.8 21 3-23 90-118 (332)
198 2fu2_A Hypothetical protein SP 21.8 89 0.003 15.7 2.6 19 50-68 4-22 (102)
199 3q9s_A DNA-binding response re 21.5 1.2E+02 0.0041 17.0 6.4 48 14-63 107-154 (249)
200 1srr_A SPO0F, sporulation resp 21.4 80 0.0027 15.0 6.5 48 14-63 74-121 (124)
201 2gwr_A DNA-binding response re 21.4 1.1E+02 0.0039 16.7 3.7 48 15-64 76-123 (238)
202 3re1_A Uroporphyrinogen-III sy 21.2 1.3E+02 0.0044 17.3 4.3 45 14-63 220-264 (269)
203 3hz8_A Thiol:disulfide interch 21.1 75 0.0026 17.3 2.4 15 49-63 170-184 (193)
204 1a04_A Nitrate/nitrite respons 20.6 1.1E+02 0.0038 16.4 5.6 47 15-63 79-125 (215)
205 2d00_A V-type ATP synthase sub 20.5 32 0.0011 17.6 0.7 33 30-65 14-46 (109)
206 3m6m_D Sensory/regulatory prot 20.5 94 0.0032 15.5 5.8 47 15-63 90-136 (143)
207 3kht_A Response regulator; PSI 20.5 92 0.0031 15.3 6.1 47 14-62 80-127 (144)
208 2f48_A Diphosphate--fructose-6 20.4 69 0.0024 21.3 2.4 22 2-23 254-275 (555)
209 2a9o_A Response regulator; ess 20.3 83 0.0028 14.7 6.3 47 14-62 71-117 (120)
210 4es6_A Uroporphyrinogen-III sy 20.2 1.3E+02 0.0045 17.0 3.9 40 15-59 213-252 (254)
211 2wx4_A DCP1, decapping protein 20.0 23 0.0008 15.5 0.1 22 46-67 7-29 (46)
No 1
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.85 E-value=1.4e-21 Score=124.24 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=63.8
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHH-HHhCceeEecCC---CCCHHHHHHHHHHHhC---Chhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRI-AKIKTGVVLEFD---NLNEDNIYDALITVLE---DPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~-~~~g~g~~~~~~---~~~~~~l~~~i~~~l~---~~~~~~~ 69 (70)
||||+||++|++++|||+|++|++.||+.||+++ +++|+|+.+... .+++++|.++|+++|+ +++||++
T Consensus 363 tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~ 438 (480)
T 2vch_A 363 THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNK 438 (480)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHH
T ss_pred ecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHH
Confidence 7999999999999999999999999999999998 689999999765 6899999999999998 6778875
No 2
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.85 E-value=2.6e-21 Score=122.77 Aligned_cols=69 Identities=29% Similarity=0.411 Sum_probs=64.9
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHH-hCceeEecCCCCCHHHHHHHHHHHhCCh---hhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAK-IKTGVVLEFDNLNEDNIYDALITVLEDP---IFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~-~g~g~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~ 69 (70)
||||+||++|++++|||+|++|++.||..||+++++ +|+|+.++.+.+++++|.++|+++|+++ +||++
T Consensus 351 tH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~ 423 (454)
T 3hbf_A 351 THSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQK 423 (454)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHH
T ss_pred ecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHH
Confidence 799999999999999999999999999999999999 6999999887899999999999999987 67765
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.84 E-value=5.6e-21 Score=120.83 Aligned_cols=69 Identities=29% Similarity=0.465 Sum_probs=65.0
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHh-CceeEecCCCCCHHHHHHHHHHHhCCh---hhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKI-KTGVVLEFDNLNEDNIYDALITVLEDP---IFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~-g~g~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~ 69 (70)
||||+||++|++++|||+|++|++.||..||+++++. |+|+.++.+.++++.|.++|+++|+|+ +||++
T Consensus 349 th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~ 421 (456)
T 2c1x_A 349 THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLREN 421 (456)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHH
Confidence 7999999999999999999999999999999999997 999999877889999999999999987 67765
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.84 E-value=8e-21 Score=120.48 Aligned_cols=68 Identities=21% Similarity=0.410 Sum_probs=63.7
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHH-HhCceeEecCCCCCHHHHHHHHHHHhCCh---hhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIA-KIKTGVVLEFDNLNEDNIYDALITVLEDP---IFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~-~~g~g~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~ 69 (70)
||||+||++|++++|||+|++|++.||..||++++ ++|+|+.+. .++++++|.++|+++|+|+ +||++
T Consensus 377 th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~~~~~~r~~ 448 (482)
T 2pq6_A 377 THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDKGKKMKQK 448 (482)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCCcHHHHHHH
Confidence 79999999999999999999999999999999997 699999998 6789999999999999998 57765
No 5
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.82 E-value=3.3e-20 Score=103.77 Aligned_cols=69 Identities=26% Similarity=0.511 Sum_probs=65.6
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||++|++|++++|+|+|++|...||..|++++++.|+|+.++..+++.+.|.++|.++++|++++++
T Consensus 92 ~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 160 (170)
T 2o6l_A 92 THGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKEN 160 (170)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHH
T ss_pred EcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHH
Confidence 589999999999999999999999999999999999999999988888999999999999999998875
No 6
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.82 E-value=4.5e-20 Score=116.83 Aligned_cols=69 Identities=25% Similarity=0.428 Sum_probs=62.6
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHH-HHhCceeEe-c---CC--CCCHHHHHHHHHHHhC-Chhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRI-AKIKTGVVL-E---FD--NLNEDNIYDALITVLE-DPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~-~~~g~g~~~-~---~~--~~~~~~l~~~i~~~l~-~~~~~~~ 69 (70)
||||+||++|++++|||+|++|++.||..||+++ +++|+|+.+ + .+ .++++.|.++|+++|+ +++||++
T Consensus 356 th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~ 432 (463)
T 2acv_A 356 SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKK 432 (463)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHH
T ss_pred ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHH
Confidence 7999999999999999999999999999999996 789999999 3 34 6899999999999997 4788875
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.80 E-value=7.1e-20 Score=112.28 Aligned_cols=65 Identities=25% Similarity=0.259 Sum_probs=56.1
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||+||++|++++|+|+|++|++.||..||+++++.|+|+.++..+.+.+ +|+++|+|++||++
T Consensus 310 ~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~----al~~lL~d~~~r~~ 374 (400)
T 4amg_A 310 HHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAE----QCRRLLDDAGLREA 374 (400)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHH----HHHHHHHCHHHHHH
T ss_pred ccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHH----HHHHHHcCHHHHHH
Confidence 699999999999999999999999999999999999999999987766654 56778899999875
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.78 E-value=6.1e-19 Score=109.38 Aligned_cols=68 Identities=26% Similarity=0.221 Sum_probs=64.6
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||+||++|++++|+|+|++|...||..||+++++.|+|+.++..+++.++|.++|+++ .|++++++
T Consensus 308 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~ 375 (416)
T 1rrv_A 308 HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRAR 375 (416)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHH
T ss_pred ecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHH
Confidence 699999999999999999999999999999999999999999987788999999999999 99988875
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.77 E-value=9.4e-19 Score=108.60 Aligned_cols=68 Identities=26% Similarity=0.265 Sum_probs=64.4
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||+||++|++++|+|+|++|...||..||+++++.|+|+.++.++++.++|.++|+++ +|++++++
T Consensus 307 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~ 374 (415)
T 1iir_A 307 HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHAR 374 (415)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHH
T ss_pred eCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHH
Confidence 699999999999999999999999999999999999999999987788999999999999 99988865
No 10
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.77 E-value=3.3e-19 Score=110.58 Aligned_cols=69 Identities=25% Similarity=0.438 Sum_probs=65.2
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||+||++|++++|+|+|++|...||..|++++++.|+|+.+..+++++++|.++|+++++|++++++
T Consensus 327 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 395 (424)
T 2iya_A 327 THAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAER 395 (424)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 699999999999999999999999999999999999999999987778999999999999999988764
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.76 E-value=1.7e-18 Score=107.48 Aligned_cols=68 Identities=24% Similarity=0.292 Sum_probs=64.9
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||+||+.|++++|+|+|++|+..||..|++++++.|+|+.+...+++++.|.++|+++++ ++|+++
T Consensus 290 ~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~ 357 (404)
T 3h4t_A 290 HHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRAR 357 (404)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHH
T ss_pred ECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHH
Confidence 69999999999999999999999999999999999999999998888899999999999998 888875
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.76 E-value=1.2e-18 Score=108.72 Aligned_cols=69 Identities=28% Similarity=0.371 Sum_probs=65.7
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||++|++|++++|+|+|++|...||..|++++++.|+|+.++.++++++.|.++|+++++|++++++
T Consensus 341 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 409 (441)
T 2yjn_A 341 HHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAG 409 (441)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHH
Confidence 699999999999999999999999999999999999999999988888999999999999999988865
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.75 E-value=1.5e-18 Score=106.34 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=65.3
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||++|++|++++|+|+|++|...||..|++++++.|+|+.++.++.+++.|.++|+++++|++++++
T Consensus 285 ~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 353 (384)
T 2p6p_A 285 HHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARR 353 (384)
T ss_dssp ECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred eCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 689999999999999999999999999999999999999999987778999999999999999988865
No 14
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.74 E-value=5e-18 Score=104.69 Aligned_cols=69 Identities=28% Similarity=0.409 Sum_probs=65.6
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||++|++|++++|+|+|++|...||..|++++++.|+|+.+..+++++++|.+++.++++|++++++
T Consensus 319 ~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 387 (415)
T 3rsc_A 319 THGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLAR 387 (415)
T ss_dssp ESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHH
T ss_pred ECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 689999999999999999999999999999999999999999988888999999999999999988765
No 15
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.72 E-value=6.8e-18 Score=103.89 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=59.4
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||.+|++|++++|+|+|++|...||..|+.++++.|+|+.++.++++++.|.++|.++++|++++++
T Consensus 306 ~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 374 (398)
T 4fzr_A 306 HHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGN 374 (398)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHH
T ss_pred ecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 689999999999999999999999999999999999999999988888899999999999999998875
No 16
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.70 E-value=2.2e-17 Score=101.06 Aligned_cols=69 Identities=26% Similarity=0.365 Sum_probs=65.4
Q ss_pred CCCcHHHHHHHHHhCCceeeecC-CCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPM-FGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~-~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||++|++|++++|+|+|++|. ..||..|++++++.|+|+.+..++++++.|.+++.++++|++++++
T Consensus 303 ~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~ 372 (402)
T 3ia7_A 303 THGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRER 372 (402)
T ss_dssp ECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 68999999999999999999999 9999999999999999999988888999999999999999988765
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.70 E-value=3.1e-17 Score=100.55 Aligned_cols=69 Identities=25% Similarity=0.309 Sum_probs=64.9
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecC--CCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEF--DNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~--~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||.+|++|++++|+|+|++|...||..|+.++++.|+|+.+.. ++.+++.|.+++.++++|++++++
T Consensus 292 ~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 362 (391)
T 3tsa_A 292 CAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAA 362 (391)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHH
T ss_pred eCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHH
Confidence 589999999999999999999999999999999999999999987 667899999999999999988875
No 18
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.68 E-value=5.4e-17 Score=100.02 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=62.6
Q ss_pred CCCcHHHHHHHHHhCCceeeecC----CCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPM----FGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~----~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||+|.+|++|++++|+|+|++|+ ..+|..||+.+++.|+|++++.++++++.|.++|.+++.|++.+++
T Consensus 258 ~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~ 330 (365)
T 3s2u_A 258 CRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRS 330 (365)
T ss_dssp ECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHH
T ss_pred ecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHH
Confidence 58999999999999999999987 3679999999999999999998899999999999999999876654
No 19
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.68 E-value=6.5e-17 Score=100.21 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=63.9
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
+|||++|++|++++|+|+|++|...||..|++.+++.|+|+.+..+++++++|.++|.++++|++++++
T Consensus 305 ~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 373 (430)
T 2iyf_A 305 THAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARR 373 (430)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 589999999999999999999999999999999999999999987788999999999999999887764
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.62 E-value=7.6e-16 Score=94.67 Aligned_cols=69 Identities=28% Similarity=0.322 Sum_probs=65.0
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
+|||++|++|++++|+|+|++|...||..|+..+++.|+|..+..++++++.|.+++.++++|++++++
T Consensus 314 ~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 382 (412)
T 3otg_A 314 HHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAG 382 (412)
T ss_dssp ESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 589999999999999999999999999999999999999999988788999999999999999988765
No 21
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.59 E-value=4.4e-16 Score=95.92 Aligned_cols=65 Identities=18% Similarity=0.260 Sum_probs=59.3
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHH--HHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNA--QRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na--~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
||||.+|++|++++|+|+|++|...||..|+ .++++.|+|+.++.++.+.+.|. ++++|++++++
T Consensus 305 ~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~ 371 (398)
T 3oti_A 305 HHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTA 371 (398)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHH
Confidence 5899999999999999999999999999999 99999999999987777887777 78889888875
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.43 E-value=5.7e-14 Score=82.60 Aligned_cols=55 Identities=11% Similarity=-0.042 Sum_probs=46.7
Q ss_pred CCCcHHHHHHHHHhCCceeeecCC----CChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHH
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMF----GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITV 60 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~----~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~ 60 (70)
||||++|++|++++|+|+|++|.. .||..||+++++.|+++.+. ++.|.++|.++
T Consensus 138 shaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~-----~~~L~~~i~~l 196 (224)
T 2jzc_A 138 SHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCA-----PTETGLIAGLR 196 (224)
T ss_dssp ESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEEC-----SCTTTHHHHHH
T ss_pred ECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcC-----HHHHHHHHHHH
Confidence 699999999999999999999984 46999999999999998773 45566666665
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.16 E-value=4.4e-11 Score=72.34 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCcHHHHHHHHHhCCceeeecCC---CChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMF---GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~---~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
++|.++++|++++|+|+|..|.. .+|..|+..+.+.|.|..++..+.+++++.++|.++ |++.++
T Consensus 261 ~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~ 328 (364)
T 1f0k_A 261 RSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLL 328 (364)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHH
T ss_pred CCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHH
Confidence 45788999999999999999986 789999999999999999987777799999999988 666554
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.99 E-value=4.4e-10 Score=67.86 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=40.1
Q ss_pred CCCcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEec
Q psy381 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLE 44 (70)
Q Consensus 1 ~hgG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~ 44 (70)
|+|| +|++|+++.|+|+|++|+..+|..||+.+++.|+++.+.
T Consensus 231 ~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 231 ISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYK 273 (282)
T ss_dssp EESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECG
T ss_pred ECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcc
Confidence 4677 799999999999999999999999999999999999886
No 25
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.18 E-value=1.3e-06 Score=53.95 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=46.9
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
..+++||+++|+|+|..|...+.......+.+.|.++... ++++|.+++.++++| +.+++
T Consensus 292 g~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~~~La~ai~~ll~d-~~r~~ 351 (374)
T 2xci_A 292 GHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NETELVTKLTELLSV-KKEIK 351 (374)
T ss_dssp CCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SHHHHHHHHHHHHHS-CCCCC
T ss_pred CcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CHHHHHHHHHHHHhH-HHHHH
Confidence 4679999999999998887666666666665667766554 789999999999988 65543
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.17 E-value=4.3e-06 Score=50.73 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=43.2
Q ss_pred HHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 7 SLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 7 t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
.+.|++++|+|+|+.|...++.. +.+.|.|+.++ .++++|.+++.++++|++.++
T Consensus 285 ~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~~~~~ 339 (376)
T 1v4v_A 285 LQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENPEELS 339 (376)
T ss_dssp HHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhChHhhh
Confidence 36799999999999876555544 24567887775 289999999999999986554
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.07 E-value=3.7e-06 Score=51.01 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=43.3
Q ss_pred HHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 7 SLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 7 t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
.++|++++|+|+|..|...... .+.+.|.|+.++. ++++|.++|.++++|++.++
T Consensus 293 ~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~ 347 (384)
T 1vgv_A 293 IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT---DKQRIVEEVTRLLKDENEYQ 347 (384)
T ss_dssp GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS---SHHHHHHHHHHHHHCHHHHH
T ss_pred hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC---CHHHHHHHHHHHHhChHHHh
Confidence 3789999999999998744332 2455678888864 79999999999999986554
No 28
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.96 E-value=2.1e-05 Score=47.28 Aligned_cols=61 Identities=20% Similarity=0.308 Sum_probs=47.3
Q ss_pred CcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 3 GGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 3 gG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
|..++++|++++|+|+|+.+... +...+.+.+.|..++. ..+.+++.++|.++++|++.++
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~~~~~ 342 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSPLRM 342 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHHHHH
T ss_pred CcccHHHHHHHCCCCEEEecCCC----chhhhccCCceEEeCC-CCCHHHHHHHHHHHHcChHHHH
Confidence 34578999999999999987643 2455666788988862 2279999999999999887654
No 29
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.94 E-value=2.9e-05 Score=46.88 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
+.++|++++|+|+|..+..... ..+.+.|.|..++. ++++|.++|.++++|++.+++
T Consensus 292 ~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~---d~~~la~~i~~ll~~~~~~~~ 348 (375)
T 3beo_A 292 GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT---DEETIFSLADELLSDKEAHDK 348 (375)
T ss_dssp HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS---CHHHHHHHHHHHHHCHHHHHH
T ss_pred ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC---CHHHHHHHHHHHHhChHhHhh
Confidence 4589999999999998543332 22456678887763 799999999999999876543
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.93 E-value=1.4e-05 Score=49.86 Aligned_cols=53 Identities=15% Similarity=0.138 Sum_probs=42.1
Q ss_pred HHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 9 QEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 9 ~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
.|+.++|+|+|++|...++.. +.+.|.++.+.. ++++|.+++.+++.|++.++
T Consensus 314 ~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~ 366 (403)
T 3ot5_A 314 EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHD 366 (403)
T ss_dssp HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHH
Confidence 799999999999976555543 346788877753 79999999999999887654
No 31
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.88 E-value=2.5e-05 Score=43.25 Aligned_cols=55 Identities=22% Similarity=0.192 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+++|++++|+|+|+.+. ......+.+...|..+ . .+.+++.++|.++++|+++
T Consensus 111 ~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~--~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 111 GLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-N--ADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp CHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-C--SCHHHHHHHHHHHHHCTTT
T ss_pred ChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-C--CCHHHHHHHHHHHHhCHHH
Confidence 4689999999999999864 3344445555678777 2 2799999999999988765
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.78 E-value=6e-05 Score=45.77 Aligned_cols=58 Identities=26% Similarity=0.326 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
..+++|++++|+|+|+.+. ......+.+...|..++.. +.+++.++|.++++|++.++
T Consensus 297 ~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~ 354 (406)
T 2gek_A 297 GIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD--DADGMAAALIGILEDDQLRA 354 (406)
T ss_dssp CHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred chHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 4689999999999999865 3345555556678877643 68999999999999876543
No 33
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.74 E-value=4.6e-05 Score=46.76 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=44.2
Q ss_pred cHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 4 GLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 4 G~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
...+++|++++|+|+|..+. ..+...+.+.+.|..++ +.+++.++|.++++|++.++
T Consensus 328 ~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll~~~~~~~ 384 (416)
T 2x6q_A 328 FGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVVLYLLKHPEVSK 384 (416)
T ss_dssp SCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHHHHHHHCHHHHH
T ss_pred CccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHHHHHHhCHHHHH
Confidence 35689999999999999865 23444455556788886 78999999999999876543
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.74 E-value=2.2e-05 Score=48.82 Aligned_cols=57 Identities=21% Similarity=0.173 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
+...|+.++|+|+|+.+...+.. .+.+.|.++.+.. ++++|.+++.++++|++.+++
T Consensus 317 g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~~~~~ 373 (396)
T 3dzc_A 317 GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDPQAYQA 373 (396)
T ss_dssp GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCHHHHHH
T ss_pred cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCHHHHHH
Confidence 44479999999999985555543 2456787766652 699999999999999876543
No 35
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.73 E-value=5.5e-05 Score=42.15 Aligned_cols=57 Identities=18% Similarity=0.097 Sum_probs=43.3
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC-Chhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE-DPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~-~~~~~~ 68 (70)
..+++|++++|+|+|+.... .....+ ..+.|..++.. +.+.+.++|.++++ |++.++
T Consensus 129 ~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~~~g~~~~~~--~~~~l~~~i~~l~~~~~~~~~ 186 (200)
T 2bfw_A 129 GLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAILKALELSRSDLS 186 (200)
T ss_dssp CHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHHCCHHHHH
T ss_pred cHHHHHHHHCCCCEEEeCCC----ChHHHc-CCCceEEecCC--CHHHHHHHHHHHHhcCHHHHH
Confidence 46799999999999988642 334444 55678777643 68999999999998 877554
No 36
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.71 E-value=3.8e-05 Score=46.44 Aligned_cols=59 Identities=31% Similarity=0.313 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 3 GGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 3 gG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
|..++++|++++|+|+|..+...- ..+...|.|..++.. +++++.++|.++++|++.++
T Consensus 291 ~~~~~~~Ea~a~G~PvI~~~~~~~-----~e~i~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~ 349 (394)
T 3okp_A 291 GLGIVYLEAQACGVPVIAGTSGGA-----PETVTPATGLVVEGS--DVDKLSELLIELLDDPIRRA 349 (394)
T ss_dssp SSCHHHHHHHHTTCCEEECSSTTG-----GGGCCTTTEEECCTT--CHHHHHHHHHHHHTCHHHHH
T ss_pred ccCcHHHHHHHcCCCEEEeCCCCh-----HHHHhcCCceEeCCC--CHHHHHHHHHHHHhCHHHHH
Confidence 335789999999999999876431 112223477777643 69999999999999976544
No 37
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.70 E-value=5.9e-05 Score=48.08 Aligned_cols=63 Identities=8% Similarity=0.054 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHhCCceeeecCCCCh-HHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 3 GGLQSLQEAFHYGVKLICIPMFGDQ-DLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 3 gG~~t~~e~l~~g~P~l~~P~~~dq-~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
|+.++++|++++|+|+|..|-..-. ..-+..+...|+...+.. +++++.+++.++++|++.++
T Consensus 464 ~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~~~~ 527 (568)
T 2vsy_A 464 NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPAALT 527 (568)
T ss_dssp CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHH
T ss_pred CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHHHHH
Confidence 5568899999999999997643111 122455666788776653 79999999999999987654
No 38
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.66 E-value=8.5e-05 Score=45.72 Aligned_cols=58 Identities=24% Similarity=0.204 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
.++++|++++|+|+|..+... ....+.+.+.|..++.. +.+++.++|.++++|++.++
T Consensus 339 ~~~~~Eama~G~PvI~~~~~~----~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 339 GLVAMEAQASGTPVIAARVGG----LPIAVAEGETGLLVDGH--SPHAWADALATLLDDDETRI 396 (438)
T ss_dssp CHHHHHHHHTTCCEEEESCTT----HHHHSCBTTTEEEESSC--CHHHHHHHHHHHHHCHHHHH
T ss_pred chHHHHHHHcCCCEEecCCCC----hhHHhhCCCcEEECCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 468999999999999987532 23344445578887643 68999999999999876554
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.61 E-value=0.00014 Score=45.26 Aligned_cols=55 Identities=15% Similarity=0.059 Sum_probs=41.6
Q ss_pred HHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 7 SLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 7 t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
...|+.++|+|+|.++...+.+. ..+.|.++.+.. ++++|.+++.++++|+..++
T Consensus 293 v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~~~~~ 347 (385)
T 4hwg_A 293 ITEEASILNLPALNIREAHERPE----GMDAGTLIMSGF---KAERVLQAVKTITEEHDNNK 347 (385)
T ss_dssp HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECCS---SHHHHHHHHHHHHTTCBTTB
T ss_pred HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcCC---CHHHHHHHHHHHHhChHHHH
Confidence 36899999999999987554222 256787776642 79999999999998876443
No 40
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.54 E-value=0.00012 Score=44.75 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC-Chhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE-DPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~-~~~~~~ 68 (70)
.++++|++++|+|+|..+... ...+.+.|.|..++.. +++++.++|.++++ |++.++
T Consensus 344 ~~~~~EAma~G~Pvi~s~~~~-----~~e~~~~~~g~~~~~~--d~~~la~~i~~ll~~~~~~~~ 401 (439)
T 3fro_A 344 GLVALEAMCLGAIPIASAVGG-----LRDIITNETGILVKAG--DPGELANAILKALELSRSDLS 401 (439)
T ss_dssp CHHHHHHHHTTCEEEEESSTH-----HHHHCCTTTCEEECTT--CHHHHHHHHHHHHHHTTTTTH
T ss_pred cHHHHHHHHCCCCeEEcCCCC-----cceeEEcCceEEeCCC--CHHHHHHHHHHHHhcCHHHHH
Confidence 468999999999999986532 2233334688888743 68999999999998 765543
No 41
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.52 E-value=4e-05 Score=46.71 Aligned_cols=60 Identities=25% Similarity=0.203 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 3 GGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 3 gG~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
|..++++|++++|+|+|+.+...- ...+.+...|..++.. +.+++.++|.++++|++.++
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~~~----~e~v~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVGGI----PEVIQHGDTGYLCEVG--DTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCTTS----TTTCCBTTTEEEECTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred CCchHHHHHHhcCCCEEEecCCCh----HHHhhcCCceEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 345789999999999999876321 1222334578777643 68999999999999876543
No 42
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.36 E-value=0.00055 Score=43.03 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
..+++||+++|+|+|+.... .....+.+...|..++.. +.+++.++|.++++|++.++
T Consensus 372 ~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~--d~~~la~~i~~ll~~~~~~~ 429 (499)
T 2r60_A 372 GLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE--DPEDIARGLLKAFESEETWS 429 (499)
T ss_dssp CSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT--CHHHHHHHHHHHHSCHHHHH
T ss_pred CcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC--CHHHHHHHHHHHHhCHHHHH
Confidence 36799999999999998642 233444445578888643 68999999999999986544
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.30 E-value=0.00043 Score=43.26 Aligned_cols=58 Identities=19% Similarity=0.120 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHh---------CceeEecCCCCCHHHHHHHHHHHh---CChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKI---------KTGVVLEFDNLNEDNIYDALITVL---EDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~---------g~g~~~~~~~~~~~~l~~~i~~~l---~~~~~~~ 68 (70)
..+++||+++|+|+|+.... -....+.+. +.|..++.. +++++.++|.+++ .|++.++
T Consensus 379 ~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~ 448 (485)
T 1rzu_A 379 GLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRRTVRYYHDPKLWT 448 (485)
T ss_dssp CSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcceEeCCC--CHHHHHHHHHHHHHHhCCHHHHH
Confidence 46799999999999998652 233333333 578888643 6899999999999 7876554
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.25 E-value=0.00052 Score=42.91 Aligned_cols=58 Identities=16% Similarity=0.100 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHh---------CceeEecCCCCCHHHHHHHHHHHh---CChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKI---------KTGVVLEFDNLNEDNIYDALITVL---EDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~---------g~g~~~~~~~~~~~~l~~~i~~~l---~~~~~~~ 68 (70)
..+++||+++|+|+|+.... -....+.+. ..|..++.. +++++.++|.+++ .|++.++
T Consensus 380 g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~ 449 (485)
T 2qzs_A 380 GLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIRRAFVLWSRPSLWR 449 (485)
T ss_dssp CSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHHHHHHHHTSHHHHH
T ss_pred cHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCC--CHHHHHHHHHHHHHHcCCHHHHH
Confidence 46789999999999998642 233333333 578888743 6899999999999 6776554
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.24 E-value=0.00067 Score=45.07 Aligned_cols=63 Identities=8% Similarity=0.156 Sum_probs=44.6
Q ss_pred CcHHHHHHHHHhCCceeeecCCCCh-HHHHHHHHHhCcee-EecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 3 GGLQSLQEAFHYGVKLICIPMFGDQ-DLNAQRIAKIKTGV-VLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 3 gG~~t~~e~l~~g~P~l~~P~~~dq-~~na~~~~~~g~g~-~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
+|.+|.+||+++|+|+|..|-..-. ..-+..+...|+.. .+.. +.++..+...++..|++.++
T Consensus 529 ~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D~~~l~ 593 (631)
T 3q3e_A 529 GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAENHQERL 593 (631)
T ss_dssp CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHCHHHHH
T ss_pred cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCCHHHHH
Confidence 5779999999999999999753222 23344456678865 2432 68888888888888876654
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.19 E-value=0.00039 Score=42.52 Aligned_cols=57 Identities=16% Similarity=0.070 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCc---------------ee--EecCCCCCHHHHHHHHHHHhCChhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKT---------------GV--VLEFDNLNEDNIYDALITVLEDPIFQ 67 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~---------------g~--~~~~~~~~~~~l~~~i~~~l~~~~~~ 67 (70)
..++.||+++|+|+|..... .....+.+... |. .+... +++++.++| ++++|++.+
T Consensus 287 ~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~--d~~~la~~i-~l~~~~~~~ 359 (413)
T 3oy2_A 287 GLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGII--DVDDLVEAF-TFFKDEKNR 359 (413)
T ss_dssp CHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEEC--CHHHHHHHH-HHTTSHHHH
T ss_pred CcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccccCcceeeCCC--CHHHHHHHH-HHhcCHHHH
Confidence 46899999999999997642 22333332222 55 55533 799999999 999998765
Q ss_pred h
Q psy381 68 F 68 (70)
Q Consensus 68 ~ 68 (70)
+
T Consensus 360 ~ 360 (413)
T 3oy2_A 360 K 360 (413)
T ss_dssp H
T ss_pred H
Confidence 4
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.03 E-value=0.0012 Score=44.19 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=40.9
Q ss_pred CCcHHHHHHHHHhCCceeeecCC-CChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMF-GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~-~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
.+|.+|.+|+++.|||+|.+|-. .-.+.-+..+...|+...+-. +.++-.+...++-.|++.
T Consensus 609 ~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~---~~~~Y~~~a~~la~d~~~ 671 (723)
T 4gyw_A 609 CNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK---NRQEYEDIAVKLGTDLEY 671 (723)
T ss_dssp SCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHH
T ss_pred cCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC---CHHHHHHHHHHHhcCHHH
Confidence 46889999999999999999842 222445566666888766642 455544444455555443
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.98 E-value=0.00019 Score=38.88 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCC-ceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 5 LQSLQEAFHYGV-KLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 5 ~~t~~e~l~~g~-P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
..+++|++++|+ |+|.......- ...+.+.+. .+.. -+.+++.++|.++++|++.++.
T Consensus 88 ~~~~~Eama~G~vPvi~~~~~~~~---~~~~~~~~~--~~~~--~~~~~l~~~i~~l~~~~~~~~~ 146 (166)
T 3qhp_A 88 AIACLEAISVGIVPVIANSPLSAT---RQFALDERS--LFEP--NNAKDLSAKIDWWLENKLERER 146 (166)
T ss_dssp CHHHHHHHHTTCCEEEECCTTCGG---GGGCSSGGG--EECT--TCHHHHHHHHHHHHHCHHHHHH
T ss_pred cHHHHHHHhcCCCcEEeeCCCCch---hhhccCCce--EEcC--CCHHHHHHHHHHHHhCHHHHHH
Confidence 468999999996 99994321110 001111122 3432 2799999999999999876543
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.90 E-value=0.00047 Score=43.13 Aligned_cols=56 Identities=20% Similarity=0.140 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhh
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 68 (70)
.+++||+++|+|+|.- ..+- ...+.+-..|+.++.. +++++.++|.++++|++.++
T Consensus 329 ~~~lEAmA~G~PVV~~-~~g~----~e~v~~~~~G~lv~~~--d~~~la~ai~~ll~~~~~~~ 384 (413)
T 2x0d_A 329 YPPLEMAHFGLRVITN-KYEN----KDLSNWHSNIVSLEQL--NPENIAETLVELCMSFNNRD 384 (413)
T ss_dssp SHHHHHHHTTCEEEEE-CBTT----BCGGGTBTTEEEESSC--SHHHHHHHHHHHHHHTC---
T ss_pred cHHHHHHhCCCcEEEe-CCCc----chhhhcCCCEEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 4689999999999983 2221 1223334468777644 68999999999998876554
No 50
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=96.42 E-value=0.0021 Score=39.88 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=37.4
Q ss_pred HHHHHHH-------HhCCceeeecCCCChHHHHHHHHHhCceeE-ecCCCCCHHHHHHHHHHHhCChh
Q psy381 6 QSLQEAF-------HYGVKLICIPMFGDQDLNAQRIAKIKTGVV-LEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 6 ~t~~e~l-------~~g~P~l~~P~~~dq~~na~~~~~~g~g~~-~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
+++.||+ ++|+|+|.... +.+...|.. ++.+ +++++.++|.++++|+.
T Consensus 299 ~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 299 VYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp TTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 5678888 99999999865 444456777 6643 68999999999998764
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.33 E-value=0.0061 Score=41.55 Aligned_cols=58 Identities=24% Similarity=0.211 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHh----CChhhhh
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVL----EDPIFQF 68 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l----~~~~~~~ 68 (70)
..++.||+++|+|+|+....+ ....+.+...|..++.. +++++.++|.+++ .|++.++
T Consensus 678 glvllEAMA~G~PVIasd~GG----~~EiV~dg~~Gllv~p~--D~e~LA~aI~~lL~~Ll~d~~~~~ 739 (816)
T 3s28_A 678 GLTVVEAMTCGLPTFATCKGG----PAEIIVHGKSGFHIDPY--HGDQAADTLADFFTKCKEDPSHWD 739 (816)
T ss_dssp CHHHHHHHHTTCCEEEESSBT----HHHHCCBTTTBEEECTT--SHHHHHHHHHHHHHHHHHCTHHHH
T ss_pred cHHHHHHHHcCCCEEEeCCCC----hHHHHccCCcEEEeCCC--CHHHHHHHHHHHHHHhccCHHHHH
Confidence 367999999999999986533 23333345578888754 6888888887665 7776544
No 52
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=96.29 E-value=0.0041 Score=37.10 Aligned_cols=51 Identities=16% Similarity=0.064 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCceeeecCCCChHHHHHHHHH--hCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 5 LQSLQEAFHYGVKLICIPMFGDQDLNAQRIAK--IKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~--~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
.++++|++++|+|+|..+... ....+.+ ...|..++. +.+++.++|.++++
T Consensus 255 ~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~~---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 255 ATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTDF---APDEARRTLAGLPA 307 (342)
T ss_dssp CHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSCC---CHHHHHHHHHTSCC
T ss_pred cHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcCC---CHHHHHHHHHHHHH
Confidence 468999999999999987633 3444444 356766663 78999999988875
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.14 E-value=0.0077 Score=37.01 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHh
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVL 61 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l 61 (70)
+-+.|++++|+|+|+.+. ..++..+.+.++|+.++ +.+++.+.+.++.
T Consensus 255 ~Kl~eymA~G~PVI~~~~----~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~ 302 (339)
T 3rhz_A 255 YKLGSFLAAGIPVIVQEG----IANQELIENNGLGWIVK----DVEEAIMKVKNVN 302 (339)
T ss_dssp HHHHHHHHHTCCEEEETT----CTTTHHHHHHTCEEEES----SHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEEccC----hhHHHHHHhCCeEEEeC----CHHHHHHHHHHhC
Confidence 568999999999998764 24567778889999987 5788888887764
No 54
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=92.68 E-value=0.73 Score=25.93 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=32.9
Q ss_pred CcHHHHH---HHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 3 GGLQSLQ---EAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 3 gG~~t~~---e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
||.||+. |++..++|++++|.+ . ....++...-...+.-.+ +++++.+.+.+.+.
T Consensus 116 Gg~GTL~E~~~al~~~kpV~~l~~~--~-~~~gfi~~~~~~~i~~~~--~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 116 MGPGTAAEVALALKAKKPVVLLGTQ--P-EAEKFFTSLDAGLVHVAA--DVAGAIAAVKQLLA 173 (176)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEESCC--H-HHHHHHHHHCTTTEEEES--SHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHhCCcEEEEcCc--c-cccccCChhhcCeEEEcC--CHHHHHHHHHHHHH
Confidence 6677764 456789999999973 2 222334433222222111 78888888887654
No 55
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.97 E-value=1.5 Score=29.96 Aligned_cols=19 Identities=21% Similarity=0.092 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCceeeecCC
Q psy381 6 QSLQEAFHYGVKLICIPMF 24 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~ 24 (70)
.+.+||+++|+|+|+.-..
T Consensus 533 l~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 533 YTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHHHHTTCCEEEETTB
T ss_pred HHHHHHHHcCCCEEEeCCC
Confidence 5789999999999997653
No 56
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.84 E-value=0.6 Score=29.95 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=33.6
Q ss_pred HHHHHHHHhCC-----ceeeecCCC--ChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 6 QSLQEAFHYGV-----KLICIPMFG--DQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 6 ~t~~e~l~~g~-----P~l~~P~~~--dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.++.|++++|+ |+|+-...+ ++. ..|+.+++. +.+.+.++|.+++++
T Consensus 366 Lv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv~p~--d~~~lA~ai~~lL~~ 419 (482)
T 1uqt_A 366 LVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIVNPY--DRDEVAAALDRALTM 419 (482)
T ss_dssp HHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEECTT--CHHHHHHHHHHHHTC
T ss_pred chHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEECCC--CHHHHHHHHHHHHcC
Confidence 57899999998 666654322 221 246777654 689999999999985
No 57
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=87.18 E-value=0.76 Score=26.40 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=38.5
Q ss_pred HHHhCCceeeecC----CCChHHHHHHHHHhCceeEecCC--C---------CCHHHHHHHHHHHhCCh
Q psy381 11 AFHYGVKLICIPM----FGDQDLNAQRIAKIKTGVVLEFD--N---------LNEDNIYDALITVLEDP 64 (70)
Q Consensus 11 ~l~~g~P~l~~P~----~~dq~~na~~~~~~g~g~~~~~~--~---------~~~~~l~~~i~~~l~~~ 64 (70)
.+..+.|++++|. ...+..|...+.+.|+-++-+.. . .+.+.+.+.+.+.++..
T Consensus 119 ~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 119 TLRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQ 187 (201)
T ss_dssp HHHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTTC
T ss_pred HhhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhcC
Confidence 3557999999986 56677799999999876543321 1 23467888888888764
No 58
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=86.69 E-value=0.93 Score=26.21 Aligned_cols=56 Identities=14% Similarity=0.226 Sum_probs=40.1
Q ss_pred HHHHhCCceeeecC----CCChHHHHHHHHHhCceeEecCC-----C------CCHHHHHHHHHHHhCChh
Q psy381 10 EAFHYGVKLICIPM----FGDQDLNAQRIAKIKTGVVLEFD-----N------LNEDNIYDALITVLEDPI 65 (70)
Q Consensus 10 e~l~~g~P~l~~P~----~~dq~~na~~~~~~g~g~~~~~~-----~------~~~~~l~~~i~~~l~~~~ 65 (70)
..+..++|++++|- ......|...+.+.|+-++.+.. + .+++.|.+.+.+.+.+..
T Consensus 116 ~~L~~~~plvlaPamn~~m~~h~~Nm~~L~~~G~~ii~P~~~lacg~~g~g~mae~~~I~~~i~~~l~~~~ 186 (207)
T 3mcu_A 116 ATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQGKQ 186 (207)
T ss_dssp HHHHTTCCEEEEEEETTTTTTTHHHHHHHHHBTTEEECCEEESCTTTSTTCEEECGGGHHHHHHHHHTTCC
T ss_pred HHHhcCCCEEEEECCChhHHHHHHHHHHHHHCCCEEECCCCccCCCCcCCcCCCCHHHHHHHHHHHHhCCC
Confidence 45778999999996 34457899999999876554321 1 356788888888876643
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=85.91 E-value=2 Score=27.77 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCC--------CCCHHHHHHHHHHHh
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFD--------NLNEDNIYDALITVL 61 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~--------~~~~~~l~~~i~~~l 61 (70)
.+++||+++|+|+|.-...+ ....+.+-..|..+... ..++++|.++|++++
T Consensus 416 l~~lEAma~G~PvI~s~~gG----~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 416 LIQLQGMRYGTPCACASTGG----LVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SHHHHHHHTTCCEEECSCTH----HHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCCCC----chheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 46899999999999976532 22233333344433211 114677888887765
No 60
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=83.96 E-value=1.5 Score=25.14 Aligned_cols=21 Identities=19% Similarity=0.301 Sum_probs=16.0
Q ss_pred CcHHHHH---HHHHhCCceeeecC
Q psy381 3 GGLQSLQ---EAFHYGVKLICIPM 23 (70)
Q Consensus 3 gG~~t~~---e~l~~g~P~l~~P~ 23 (70)
||.||+. |++..++|+++++.
T Consensus 127 GG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 127 GEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CCCcHHHHHHHHHhcCCCEEEECC
Confidence 6777764 55778999999974
No 61
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=80.02 E-value=3.9 Score=20.00 Aligned_cols=47 Identities=11% Similarity=0.149 Sum_probs=31.4
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++ - .+.........+.|+--.+. +.++.+.|...++.++..
T Consensus 79 ~~~~ii~~-~-~~~~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII-G-NPDGFAQHRKLKAHADEYVA-KPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE-E-CGGGHHHHHHSTTCCSEEEE-SSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE-e-cCCchhHHHHHHhCcchhee-CCCCHHHHHHHHHHHHcC
Confidence 47899888 3 33334444555667654554 356899999999988764
No 62
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=78.71 E-value=7.4 Score=22.50 Aligned_cols=55 Identities=9% Similarity=0.043 Sum_probs=34.0
Q ss_pred CCcHHHHHHHH---------HhCCceeeecC--CCChHH-HHHHHHHhCce--------eEecCCCCCHHHHHHHHHHH
Q psy381 2 QGGLQSLQEAF---------HYGVKLICIPM--FGDQDL-NAQRIAKIKTG--------VVLEFDNLNEDNIYDALITV 60 (70)
Q Consensus 2 hgG~~t~~e~l---------~~g~P~l~~P~--~~dq~~-na~~~~~~g~g--------~~~~~~~~~~~~l~~~i~~~ 60 (70)
.||.||+-|.. .+.+|++++-. +.+... ....+.+.|.- ...+ +++++.+.+++.
T Consensus 113 pGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d----~~ee~~~~l~~~ 187 (216)
T 1ydh_A 113 PGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAP----TAKELMEKMEEY 187 (216)
T ss_dssp SCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEES----SHHHHHHHHHHC
T ss_pred CCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeC----CHHHHHHHHHHh
Confidence 48999988776 36999999853 344332 22445555531 2222 688888777653
No 63
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=77.67 E-value=3.7 Score=23.72 Aligned_cols=52 Identities=10% Similarity=0.143 Sum_probs=31.9
Q ss_pred CCceeeecCCCCh-------HHHHHHHHHhCceeEecCC------------CCCHHHHHHHHHHHhCChhh
Q psy381 15 GVKLICIPMFGDQ-------DLNAQRIAKIKTGVVLEFD------------NLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 15 g~P~l~~P~~~dq-------~~na~~~~~~g~g~~~~~~------------~~~~~~l~~~i~~~l~~~~~ 66 (70)
++|++++|-..+. ..|-+.+.++|+-++-+.. -.++++|.+.+.+.+....+
T Consensus 132 ~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~lacg~~G~gr~~~~~~Iv~~v~~~l~~~~l 202 (209)
T 1mvl_A 132 TKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLASGDYGNGAMAEPSLIYSTVRLFWESQAH 202 (209)
T ss_dssp TSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC---------CCBCCCHHHHHHHHHHHHHHC--
T ss_pred CCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCccccccCCCcCCCCCCCHHHHHHHHHHHhCCCcc
Confidence 7999999974432 2355556667765432211 23688898888877754433
No 64
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=77.60 E-value=2.9 Score=24.72 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=28.8
Q ss_pred CcHHHHHHHHHh------CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 3 GGLQSLQEAFHY------GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 3 gG~~t~~e~l~~------g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
||=||+.++... ++|++.+|... .|. + .++.++++.+++..+++.
T Consensus 43 GGDGT~l~aa~~~~~~~~~~PilGIn~G~-------------lgf-l--~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 43 GGDGTFLSAFHQYEERLDEIAFIGIHTGH-------------LGF-Y--ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp ESHHHHHHHHHHTGGGTTTCEEEEEESSS-------------CCS-S--CCBCGGGHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHhhcCCCCCEEEEeCCC-------------CCc-C--CcCCHHHHHHHHHHHHcC
Confidence 788999988764 88999998611 121 1 123466677777776653
No 65
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=75.23 E-value=3.1 Score=20.77 Aligned_cols=48 Identities=8% Similarity=0.079 Sum_probs=29.8
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
.+|+|++--..+... ....+.|+--.+. +.++.+.|..+|++++....
T Consensus 77 ~~pii~~s~~~~~~~--~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~~~ 124 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPADQPVPDAYLV-KPVKPPVLIAQLHALLARAE 124 (133)
T ss_dssp TCCEEEEESCCC-------TTSCCCSEEEE-SSCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCcHhH--HHHhhcCCceEEe-ccCCHHHHHHHHHHHHhhhc
Confidence 688888865444433 3444556544444 36689999999999986543
No 66
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=71.51 E-value=4 Score=23.93 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=30.9
Q ss_pred CcHHHHHHHHHh---CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 3 GGLQSLQEAFHY---GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 3 gG~~t~~e~l~~---g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
||=||+.+++.. ++|++.++... +|... ++.++++.++++.+++.
T Consensus 49 GGDGTll~~a~~~~~~~PilGIn~G~-------------~Gfl~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 49 GGDGTVLKAAKKAADGTPMVGFKAGR-------------LGFLT---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp ECHHHHHHHHTTBCTTCEEEEEESSS-------------CCSSC---CBCGGGHHHHHHHHHTT
T ss_pred eCcHHHHHHHHHhCCCCCEEEEECCC-------------CCccC---cCCHHHHHHHHHHHHcC
Confidence 788999999876 88999997421 22221 23577788888777754
No 67
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=68.40 E-value=7.9 Score=25.20 Aligned_cols=51 Identities=16% Similarity=0.003 Sum_probs=33.8
Q ss_pred HHHHHHHHhC---CceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 6 QSLQEAFHYG---VKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 6 ~t~~e~l~~g---~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
.+.+|++++| .|.|+--+.+- +..+. ..|+.+++. +.+.+.++|.++|.++
T Consensus 386 Lv~~EamA~~~~~g~lVlSe~aGa----~~~l~--~~allVnP~--D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 386 LSTFEAPLVNERDADVILSETCGA----AEVLG--EYCRSVNPF--DLVEQAEAISAALAAG 439 (496)
T ss_dssp SHHHHHHHHCSSCCEEEEETTBTT----HHHHG--GGSEEECTT--BHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHhCCCCCCEEEeCCCCC----HHHhC--CCEEEECCC--CHHHHHHHHHHHHcCC
Confidence 3569999996 56655544331 11221 247788754 6899999999998764
No 68
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=65.34 E-value=13 Score=19.50 Aligned_cols=47 Identities=9% Similarity=0.070 Sum_probs=33.3
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+ ........+.|+--.+. +.++++.|...|++++.
T Consensus 86 ~~ipvI~lTa~~~-~~~~~~~~~~Ga~~yl~-KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAK-REQIIEAAQAGVNGYIV-KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCC-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCC-HHHHHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHh
Confidence 4689988865444 34455566778765665 35789999999998874
No 69
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=64.03 E-value=18 Score=20.54 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=34.8
Q ss_pred HHhCCceeeecCCCC-------hHHHHHHHHHhCceeEecC-C---------------CCCHHHHHHHHHHHhCC
Q psy381 12 FHYGVKLICIPMFGD-------QDLNAQRIAKIKTGVVLEF-D---------------NLNEDNIYDALITVLED 63 (70)
Q Consensus 12 l~~g~P~l~~P~~~d-------q~~na~~~~~~g~g~~~~~-~---------------~~~~~~l~~~i~~~l~~ 63 (70)
+..++|++++|-... ...|...+.+.|+-++-+. + -.+.+++.+.+.+.+.+
T Consensus 112 ~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 112 LAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAFEIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp HHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC------------CBCCCHHHHHHHHHHHCC-
T ss_pred HHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCcccccccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 457999999996322 2578888888887443211 1 13688888888887754
No 70
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=63.94 E-value=17 Score=22.10 Aligned_cols=47 Identities=11% Similarity=0.186 Sum_probs=31.8
Q ss_pred cHHHHHHHHHhCCceeeecCC--CChHHHHHHHHHhCceeEecCCCCCHHHHHH
Q psy381 4 GLQSLQEAFHYGVKLICIPMF--GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYD 55 (70)
Q Consensus 4 G~~t~~e~l~~g~P~l~~P~~--~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~ 55 (70)
...|.-.|+-.|.|+.++|-. ..+..-+..+-+.|+ ..+. +.+++.+
T Consensus 230 sliTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA-~lv~----~~~Dil~ 278 (288)
T 3uqz_A 230 SLITCERAMEEGRDVFAIPGSILDGLSDGCHHLIQEGA-KLVT----SGQDVLA 278 (288)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSSSSTTHHHHHHHHTTC-EECS----SHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCCccchHHHHHHHCCC-EEEC----CHHHHHH
Confidence 357888999999999999853 334444555666784 4454 5666654
No 71
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=63.76 E-value=5.3 Score=20.10 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=29.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+...-...+.+.|+--.+. +.++.+.|..+|++++...
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPLAVSTWLE-KPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTTCCCEEEC-SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhcCCCEEEe-CCCCHHHHHHHHHHHHHhc
Confidence 3678887743322222211333455544454 3568999999999988653
No 72
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=63.66 E-value=13 Score=18.97 Aligned_cols=50 Identities=8% Similarity=0.138 Sum_probs=30.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhC-ceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIK-TGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g-~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+ ........+.| +--.+. +.++.+.|..+|+.++....
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l~-kP~~~~~L~~~i~~~~~~~~ 128 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFLL-KPWEDEDVFKVVEKGLQLAF 128 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEEE-SSCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheeee-CCCCHHHHHHHHHHHHHHHH
Confidence 4788888754333 33344444555 543444 35689999999988875443
No 73
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=62.89 E-value=13 Score=18.53 Aligned_cols=50 Identities=22% Similarity=0.191 Sum_probs=30.6
Q ss_pred eeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhhhc
Q psy381 18 LICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 18 ~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 69 (70)
++++--..+ ......+.+.|+--.+. +.++.+.|..++++++....+.+.
T Consensus 86 ii~~s~~~~-~~~~~~~~~~ga~~~l~-KP~~~~~L~~~l~~~~~~~~~~~~ 135 (136)
T 1dcf_A 86 LVALSGNTD-KSTKEKCMSFGLDGVLL-KPVSLDNIRDVLSDLLEPRVLYEG 135 (136)
T ss_dssp EEEEESCCS-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHSCCCCCC-
T ss_pred EEEEeCCCC-HHHHHHHHHcCCCeEEE-CCCCHHHHHHHHHHHhchhhhhhc
Confidence 444433333 33444555667754454 356899999999999876655443
No 74
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=60.79 E-value=8 Score=22.02 Aligned_cols=23 Identities=13% Similarity=0.393 Sum_probs=18.2
Q ss_pred HHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 35 AKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 35 ~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
++.|+|+.+ +++++.++|.+.+.
T Consensus 109 ~~cGVGV~V-----T~EqI~~~V~~~i~ 131 (187)
T 3tl4_X 109 ENSGVGIEI-----TEDQVRNYVMQYIQ 131 (187)
T ss_dssp HTTTTTCCC-----CHHHHHHHHHHHHH
T ss_pred HHCCCCeEe-----CHHHHHHHHHHHHH
Confidence 336888877 68999999988874
No 75
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=59.07 E-value=22 Score=20.00 Aligned_cols=55 Identities=7% Similarity=0.034 Sum_probs=32.1
Q ss_pred CCcHHHHHHH---HH------hCCceeeecC--CCChHH-HHHHHHHhCc--------eeEecCCCCCHHHHHHHHHHH
Q psy381 2 QGGLQSLQEA---FH------YGVKLICIPM--FGDQDL-NAQRIAKIKT--------GVVLEFDNLNEDNIYDALITV 60 (70)
Q Consensus 2 hgG~~t~~e~---l~------~g~P~l~~P~--~~dq~~-na~~~~~~g~--------g~~~~~~~~~~~~l~~~i~~~ 60 (70)
.||.||+-|. +. +++|++++-. +.|... ....+.+.|. -...+ +++++.+.+++.
T Consensus 105 PGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~~----~~~e~~~~l~~~ 179 (191)
T 1t35_A 105 PGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSS----RPDELIEQMQNY 179 (191)
T ss_dssp SCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEES----SHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEeC----CHHHHHHHHHHh
Confidence 4889988665 42 6899999853 333322 2244555552 11222 688887777654
No 76
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=56.28 E-value=18 Score=18.08 Aligned_cols=50 Identities=8% Similarity=0.038 Sum_probs=32.7
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|+.++....
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~ 123 (142)
T 2qxy_A 74 PDTKVAVLSAYVD-KDLIINSVKAGAVDYIL-KPFRLDYLLERVKKIISSTP 123 (142)
T ss_dssp TTCEEEEEESCCC-HHHHHHHHHHTCSCEEE-SSCCHHHHHHHHHHHHHC--
T ss_pred CCCCEEEEECCCC-HHHHHHHHHCCcceeEe-CCCCHHHHHHHHHHHHhhcc
Confidence 3688888854444 34445555667655554 35689999999999886543
No 77
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=54.91 E-value=3.2 Score=15.85 Aligned_cols=17 Identities=12% Similarity=0.376 Sum_probs=11.4
Q ss_pred cHHHHHHHHHhCCceee
Q psy381 4 GLQSLQEAFHYGVKLIC 20 (70)
Q Consensus 4 G~~t~~e~l~~g~P~l~ 20 (70)
|.|+++..++.+.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 45667777777777654
No 78
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=54.80 E-value=18 Score=17.72 Aligned_cols=47 Identities=9% Similarity=0.197 Sum_probs=32.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+ ........+.|+--.+. +..+.+.|...+++++.
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~~Ga~~~l~-KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALSLGARKVMR-KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHhcChhhhcc-CCCCHHHHHHHHHHHhc
Confidence 3688888854433 34455566677765555 35689999999998874
No 79
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=53.27 E-value=20 Score=17.74 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=32.6
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|++++....+
T Consensus 79 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~l~~~~~~~~~ 129 (140)
T 2qr3_A 79 RDLPVVLFTAYAD-IDLAVRGIKEGASDFVV-KPWDNQKLLETLLNAASQAKD 129 (140)
T ss_dssp TTCCEEEEEEGGG-HHHHHHHHHTTCCEEEE-ESCCHHHHHHHHHHHHTCC--
T ss_pred cCCCEEEEECCCC-HHHHHHHHHcCchheee-CCCCHHHHHHHHHHHHHhccc
Confidence 4788888743333 34445555667654444 356899999999999876443
No 80
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=52.81 E-value=11 Score=22.18 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=17.6
Q ss_pred CCcHHHHHHHHHh----CCceeeecC
Q psy381 2 QGGLQSLQEAFHY----GVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~----g~P~l~~P~ 23 (70)
-||=||+.+++.. ++|++.+|.
T Consensus 70 ~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 70 VGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred EcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3889999998743 789999984
No 81
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=52.52 E-value=20 Score=17.55 Aligned_cols=52 Identities=12% Similarity=0.040 Sum_probs=30.0
Q ss_pred hCCceeeecCCCChHHH--HHHHHHhCce--eEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLN--AQRIAKIKTG--VVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~n--a~~~~~~g~g--~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+.... .......+.| -.+. +.++.+.|..+|+++.....+
T Consensus 73 ~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~-KP~~~~~l~~~l~~~~~~~~~ 128 (135)
T 3eqz_A 73 SPASLILISGYDSGVLHSAETLALSCGLNVINTFT-KPINTEVLTCFLTSLSNRQAE 128 (135)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEE-SSCCHHHHHHHHHHHSCCC--
T ss_pred CCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeC-CCCCHHHHHHHHHHHHhhccc
Confidence 46788877544432211 1222234554 3344 467899999999999876543
No 82
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=52.01 E-value=21 Score=17.72 Aligned_cols=52 Identities=8% Similarity=0.043 Sum_probs=31.9
Q ss_pred hCCceeeecCCCChHHHHHHHHHhC-ceeEecCCCCCHHHHHHHHHHHhCChhhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIK-TGVVLEFDNLNEDNIYDALITVLEDPIFQ 67 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g-~g~~~~~~~~~~~~l~~~i~~~l~~~~~~ 67 (70)
..+|+|++--..+. .........| +--.+. +.++.++|..+|++......+.
T Consensus 91 ~~~~ii~~t~~~~~-~~~~~~~~~g~~~~~l~-KP~~~~~L~~~i~~~~~~~~~~ 143 (146)
T 3ilh_A 91 NKSIVCLLSSSLDP-RDQAKAEASDWVDYYVS-KPLTANALNNLYNKVLNEGHHH 143 (146)
T ss_dssp TTCEEEEECSSCCH-HHHHHHHHCSSCCEEEC-SSCCHHHHHHHHHHHHCC----
T ss_pred CCCeEEEEeCCCCh-HHHHHHHhcCCcceeee-CCCCHHHHHHHHHHHHHhccCC
Confidence 46777777544443 3344455555 544444 4678999999999998876554
No 83
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=51.56 E-value=43 Score=21.16 Aligned_cols=50 Identities=14% Similarity=0.278 Sum_probs=33.3
Q ss_pred cHHHHHHHHHhCCceeeecC--CCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHH
Q psy381 4 GLQSLQEAFHYGVKLICIPM--FGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALI 58 (70)
Q Consensus 4 G~~t~~e~l~~g~P~l~~P~--~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~ 58 (70)
...|.-.++-.|.|+..+|- +..+..=+..+-+.|+. .+. +.+++.+.+.
T Consensus 251 sliTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~-lv~----~~~Dil~~l~ 302 (382)
T 3maj_A 251 SLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGAT-LIT----SASDIVEAVA 302 (382)
T ss_dssp HHHHHHHHHHHTCCEEECCCCTTCGGGHHHHHHHHTTCE-ECS----SHHHHHHHHT
T ss_pred HHHHHHHHHHhCCcEEEEcCCCCCcccccHHHHHHCCCE-EEC----CHHHHHHHhh
Confidence 35778888999999999985 33344555666667844 444 5666665553
No 84
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=51.53 E-value=23 Score=17.96 Aligned_cols=50 Identities=12% Similarity=0.036 Sum_probs=30.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|+.++....
T Consensus 77 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~L~~~l~~~~~~~~ 126 (154)
T 2qsj_A 77 PSNAVALISGETD-HELIRAALEAGADGFIP-KSADPQVLIHAVSLILEGEI 126 (154)
T ss_dssp TTSEEEEC------CHHHHHHHHTTCCBBCC-TTSCHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEeCCCC-HHHHHHHHHccCCEEEe-CCCCHHHHHHHHHHHHcCCE
Confidence 4678888754333 23344445567654554 35689999999999887543
No 85
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=50.35 E-value=22 Score=17.52 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=32.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|+.++...
T Consensus 81 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~~ 129 (140)
T 3cg0_A 81 CNLPIIFITSSQD-VETFQRAKRVNPFGYLA-KPVAADTLHRSIEMAIHKK 129 (140)
T ss_dssp SCCCEEEEECCCC-HHHHHHHHTTCCSEEEE-ESCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCC-HHHHHHHHhcCCCEEEe-CCCCHHHHHHHHHHHHhcc
Confidence 5788888854444 33444455567655554 3568999999999887543
No 86
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=49.78 E-value=25 Score=17.83 Aligned_cols=50 Identities=18% Similarity=0.189 Sum_probs=33.3
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++....
T Consensus 93 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~~ 142 (150)
T 4e7p_A 93 LETKVVVVTTFKRA-GYFERAVKAGVDAYVL-KERSIADLMQTLHTVLEGRK 142 (150)
T ss_dssp CSCEEEEEESCCCH-HHHHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEeCCCCH-HHHHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHcCCE
Confidence 36788887654443 3344455667654554 35689999999999987643
No 87
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=49.69 E-value=23 Score=17.48 Aligned_cols=51 Identities=10% Similarity=0.110 Sum_probs=33.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++....+
T Consensus 78 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~~ 128 (137)
T 3hdg_A 78 AKPYVIVISAFSEM-KYFIKAIELGVHLFLP-KPIEPGRLMETLEDFRHIKLA 128 (137)
T ss_dssp CCCEEEECCCCCCH-HHHHHHHHHCCSEECC-SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcCh-HHHHHHHhCCcceeEc-CCCCHHHHHHHHHHHHHHHhc
Confidence 36777777544443 3344455667655554 456899999999999865443
No 88
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=49.13 E-value=14 Score=21.06 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=16.2
Q ss_pred CCcHHHHHHHHH---------hCCceeeec
Q psy381 2 QGGLQSLQEAFH---------YGVKLICIP 22 (70)
Q Consensus 2 hgG~~t~~e~l~---------~g~P~l~~P 22 (70)
.||.||+-|..- +.+|++++-
T Consensus 125 PGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 125 PGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp SCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred CCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 488999877742 489999984
No 89
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=47.82 E-value=26 Score=17.46 Aligned_cols=51 Identities=16% Similarity=0.058 Sum_probs=33.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|++++....+
T Consensus 76 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~l~~~~~~~~~ 126 (143)
T 3jte_A 76 PHMAVIILTGHGD-LDNAILAMKEGAFEYLR-KPVTAQDLSIAINNAINRKKL 126 (143)
T ss_dssp TTCEEEEEECTTC-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCC-HHHHHHHHHhCcceeEe-CCCCHHHHHHHHHHHHHHHHH
Confidence 4678888754443 33444555667654554 356899999999988765443
No 90
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=47.49 E-value=25 Score=17.34 Aligned_cols=51 Identities=8% Similarity=0.068 Sum_probs=31.4
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+. .......+.|+--.+. +..+.+.|..+|++++....+
T Consensus 76 ~~~~ii~ls~~~~~-~~~~~~~~~ga~~~l~-Kp~~~~~L~~~i~~~~~~~~~ 126 (133)
T 3b2n_A 76 LNIKVIIVTTFKRP-GYFEKAVVNDVDAYVL-KERSIEELVETINKVNNGEKE 126 (133)
T ss_dssp CSCEEEEEESCCCH-HHHHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHC----
T ss_pred CCCcEEEEecCCCH-HHHHHHHHcCCcEEEE-CCCCHHHHHHHHHHHHcCCCc
Confidence 36788887554443 3344445567655554 356899999999999876544
No 91
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=47.22 E-value=34 Score=18.69 Aligned_cols=49 Identities=10% Similarity=0.122 Sum_probs=29.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+.......+.+.|+--.+.. .++ .|..+|++++....
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K-P~~--~L~~~i~~~l~~~~ 198 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQAGMDAFLDK-SLN--QLANVIREIESKRH 198 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHHTCSEEEET-TCT--THHHHHHHHC----
T ss_pred CCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC-cHH--HHHHHHHHHHhhhH
Confidence 46899988655533444555566776555543 334 88889998886543
No 92
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=46.93 E-value=17 Score=20.56 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=16.3
Q ss_pred CCcHHHHHHHHH---------hCCceeeec
Q psy381 2 QGGLQSLQEAFH---------YGVKLICIP 22 (70)
Q Consensus 2 hgG~~t~~e~l~---------~g~P~l~~P 22 (70)
.||.||+-|..- +++|++++-
T Consensus 116 PGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 116 PGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp SCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred CCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 489999988742 489999984
No 93
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=46.78 E-value=27 Score=17.36 Aligned_cols=52 Identities=10% Similarity=-0.026 Sum_probs=33.2
Q ss_pred HhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 13 HYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 13 ~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
...+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++....+
T Consensus 79 ~~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~~ 130 (140)
T 3lua_A 79 TANTPVIIATKSDNP-GYRHAALKFKVSDYIL-KPYPTKRLENSVRSVLKICQR 130 (140)
T ss_dssp GTTCCEEEEESCCCH-HHHHHHHHSCCSEEEE-SSCCTTHHHHHHHHHHCC---
T ss_pred cCCCCEEEEeCCCCH-HHHHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHhccc
Confidence 347888888654443 3344455667655554 356789999999999876543
No 94
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=46.74 E-value=28 Score=17.65 Aligned_cols=49 Identities=14% Similarity=-0.005 Sum_probs=31.7
Q ss_pred hCCceeeecCCCChHHHHHHHHHhC-ceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIK-TGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g-~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+. .....+.+.| +--.+. +.++.+.|..+|++++...
T Consensus 85 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~~l~-KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 85 PSTTRILLTGDPDL-KLIAKAINEGEIYRYLS-KPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp TTSEEEEECCCCCH-HHHHHHHHTTCCSEEEC-SSCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCH-HHHHHHHhCCCcceEEe-CCCCHHHHHHHHHHHHHHh
Confidence 47888887544443 3344455566 544444 3668999999999887643
No 95
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=46.63 E-value=28 Score=17.61 Aligned_cols=49 Identities=10% Similarity=-0.048 Sum_probs=29.8
Q ss_pred hCCceeeecCCCChHHHHHHHHHhC-ceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIK-TGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g-~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+. .......+.| +--.+. +.++.+.|..+|+.++...
T Consensus 75 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~~l~-KP~~~~~L~~~i~~~l~~~ 124 (151)
T 3kcn_A 75 PNSVYLMLTGNQDL-TTAMEAVNEGQVFRFLN-KPCQMSDIKAAINAGIKQY 124 (151)
T ss_dssp SSCEEEEEECGGGH-HHHHHHHHHTCCSEEEE-SSCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCH-HHHHHHHHcCCeeEEEc-CCCCHHHHHHHHHHHHHHH
Confidence 46777777543333 3334444556 533343 3568999999999887653
No 96
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=46.56 E-value=26 Score=17.16 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=30.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+. .....+.+.|+--.+. +..+.+.|..+++.++....
T Consensus 73 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~~~ 122 (134)
T 3f6c_A 73 YSGIIIIVSAKNDH-FYGKHCADAGANGFVS-KKEGMNNIIAAIEAAKNGYC 122 (134)
T ss_dssp CCSEEEEEECC----CTHHHHHHTTCSEEEE-GGGCTHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEeCCCCh-HHHHHHHHhCCCEEEe-CCCCHHHHHHHHHHHHCCCE
Confidence 36777777433322 2234444667654444 24578999999999987643
No 97
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=45.99 E-value=14 Score=20.68 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=22.1
Q ss_pred HHHhCCceeeecCC-------CChHHHHHHHHHhCcee
Q psy381 11 AFHYGVKLICIPMF-------GDQDLNAQRIAKIKTGV 41 (70)
Q Consensus 11 ~l~~g~P~l~~P~~-------~dq~~na~~~~~~g~g~ 41 (70)
++..++|++++|-. .-...|...+.+.|+-+
T Consensus 106 ~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~i 143 (175)
T 3qjg_A 106 CHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSI 143 (175)
T ss_dssp HHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHTTCEE
T ss_pred HHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHCCCEE
Confidence 45669999999942 22357888888888643
No 98
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=45.24 E-value=10 Score=20.32 Aligned_cols=43 Identities=23% Similarity=0.225 Sum_probs=28.2
Q ss_pred eeeecCCCChHHHHHHHHH--hCceeEecCCCCC-HHHHHHHHHHH
Q psy381 18 LICIPMFGDQDLNAQRIAK--IKTGVVLEFDNLN-EDNIYDALITV 60 (70)
Q Consensus 18 ~l~~P~~~dq~~na~~~~~--~g~g~~~~~~~~~-~~~l~~~i~~~ 60 (70)
+.++|...+|...|..+.+ ...|+.++.+... .+.|...|++.
T Consensus 11 v~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a 56 (130)
T 1v95_A 11 CSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDV 56 (130)
T ss_dssp EEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHH
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHH
Confidence 4678998888888888777 3556655432211 46677777654
No 99
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=45.01 E-value=22 Score=20.60 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=14.2
Q ss_pred CCcHHHHHHHHHhCCceeeecCC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMF 24 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~ 24 (70)
+||........ ..+|++-+|..
T Consensus 70 RGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 70 AGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp EHHHHHHHHTT-CSSCEEEECCC
T ss_pred CChHHHHHHhh-CCCCEEEecCC
Confidence 45555555543 47999998873
No 100
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=43.95 E-value=15 Score=22.00 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=17.1
Q ss_pred CcHHHHHHHHHh----CCceeeecC
Q psy381 3 GGLQSLQEAFHY----GVKLICIPM 23 (70)
Q Consensus 3 gG~~t~~e~l~~----g~P~l~~P~ 23 (70)
||-||+.+++.. ++|++.++.
T Consensus 83 GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 83 GGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eCCHHHHHHHHHhccCCCCEEEEeC
Confidence 788999888644 889999985
No 101
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=43.91 E-value=30 Score=17.14 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=32.8
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+. .......+.|+--.+. +.++.+.|..+|++++...
T Consensus 79 ~~~~ii~~s~~~~~-~~~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 79 FHLPTIVMASSSDI-PTAVRAMRASAADFIE-KPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp CCCCEEEEESSCCH-HHHHHHHHTTCSEEEE-SSBCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCH-HHHHHHHHcChHHhee-CCCCHHHHHHHHHHHHhcc
Confidence 36888888654443 3344455667655555 3568999999999987654
No 102
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=43.83 E-value=30 Score=17.07 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=32.4
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+.++...
T Consensus 83 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 83 ANIIVIAMTGALTD-DNVSRIVALGAETCFG-KPLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp TTSEEEEEESSCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHHTT
T ss_pred cCCcEEEEeCCCCH-HHHHHHHhcCCcEEEe-CCCCHHHHHHHHHHHHHhh
Confidence 46788887544443 3344455667655554 3568999999999988654
No 103
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=43.64 E-value=43 Score=18.85 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 28 DLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 28 ~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..|+.+-++.|.--++-....+.+.|...+++-|.|..
T Consensus 118 ~LN~~Ye~kFGfpFVi~v~G~s~~~IL~~l~~RL~N~~ 155 (181)
T 2q37_A 118 EWNVLYKKKFGFIFIICASGRTHAEMLHALKERYENRP 155 (181)
T ss_dssp HHHHHHHHHHSSCCCCCCSSCCHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHcCCeEEEEeCCCCHHHHHHHHHHHHCCCH
Confidence 36888888888776665556688888888887777653
No 104
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=41.61 E-value=35 Score=17.24 Aligned_cols=49 Identities=8% Similarity=0.109 Sum_probs=32.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+.++...
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-kp~~~~~L~~~i~~~~~~~ 126 (153)
T 3cz5_A 78 GAARILIFTMHQGS-AFALKAFEAGASGYVT-KSSDPAELVQAIEAILAGR 126 (153)
T ss_dssp TTCCEEEEESCCSH-HHHHHHHHTTCSEEEE-TTSCTTHHHHHHHHHTTTC
T ss_pred CCCeEEEEECCCCH-HHHHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHhCC
Confidence 46888887544443 3344555677655554 3557888999999887653
No 105
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=40.91 E-value=33 Score=16.73 Aligned_cols=47 Identities=4% Similarity=0.099 Sum_probs=30.9
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++.
T Consensus 84 ~~~pii~ls~~~~~-~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 84 KRIPVVVLSTSINE-DDIFHSYDLHVNCYIT-KSANLSQLFQIVKGIEE 130 (140)
T ss_dssp GGSCEEEEESCCCH-HHHHHHHHTTCSEEEE-CCSSHHHHHHHHHHHHH
T ss_pred ccccEEEEecCCcH-HHHHHHHHhchhheec-CCCCHHHHHHHHHHHHH
Confidence 46788888554443 3344445667655554 35689999999998874
No 106
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=40.74 E-value=51 Score=18.89 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=24.1
Q ss_pred HHHHhCCceeeecCC----CChHHHHHHHHHhCceeE
Q psy381 10 EAFHYGVKLICIPMF----GDQDLNAQRIAKIKTGVV 42 (70)
Q Consensus 10 e~l~~g~P~l~~P~~----~dq~~na~~~~~~g~g~~ 42 (70)
.++..++|++++|-. .-...|...+.+.|+-++
T Consensus 126 v~Lk~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~ii 162 (209)
T 3zqu_A 126 VALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVIL 162 (209)
T ss_dssp HHHHHTCCEEEEECCSSCCHHHHHHHHHHHHHTCEEC
T ss_pred HHHhcCCcEEEEEcccccCHHHHHHHHHHHHCCCEEe
Confidence 456679999999972 124578888999887543
No 107
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=40.32 E-value=25 Score=20.26 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=31.6
Q ss_pred CCcHHHHHHHH---H------hCCceeeecC--CCChHHH-HHHHHHhCc--------eeEecCCCCCHHHHHHHHHHH
Q psy381 2 QGGLQSLQEAF---H------YGVKLICIPM--FGDQDLN-AQRIAKIKT--------GVVLEFDNLNEDNIYDALITV 60 (70)
Q Consensus 2 hgG~~t~~e~l---~------~g~P~l~~P~--~~dq~~n-a~~~~~~g~--------g~~~~~~~~~~~~l~~~i~~~ 60 (70)
.||.||+-|.. . +++|++++-. +.|...+ ...+.+.|. =...+ +++++.+.+++.
T Consensus 117 pGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d----~~ee~~~~l~~~ 191 (215)
T 2a33_A 117 PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAP----TAKELVKKLEEY 191 (215)
T ss_dssp SCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEES----SHHHHHHHHHC-
T ss_pred CCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeC----CHHHHHHHHHHh
Confidence 48899997775 2 3899998853 3443322 233444443 11222 678877777643
No 108
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=40.14 E-value=35 Score=16.77 Aligned_cols=51 Identities=10% Similarity=-0.009 Sum_probs=32.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+++.....+
T Consensus 80 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~~ 130 (136)
T 3hdv_A 80 AALSIIVVSGDTDV-EEAVDVMHLGVVDFLL-KPVDLGKLLELVNKELKIGEG 130 (136)
T ss_dssp TTCEEEEEESSCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC----
T ss_pred CCCCEEEEeCCCCh-HHHHHHHhCCcceEEe-CCCCHHHHHHHHHHHhcCchh
Confidence 45788877654443 3445555677655554 356899999999999876544
No 109
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=40.08 E-value=20 Score=18.77 Aligned_cols=24 Identities=8% Similarity=0.170 Sum_probs=18.9
Q ss_pred CCCHHHHHHHHHHH-hCChhhhhcC
Q psy381 47 NLNEDNIYDALITV-LEDPIFQFFL 70 (70)
Q Consensus 47 ~~~~~~l~~~i~~~-l~~~~~~~~l 70 (70)
+.+.++|..-+.++ ++|..++++|
T Consensus 7 ~~t~EeLaaeL~kLqmENK~LKkkl 31 (110)
T 2oa5_A 7 DKTYEEMVKEVERLKLENKTLKQKV 31 (110)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999888 7777777654
No 110
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=39.54 E-value=35 Score=16.68 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=31.0
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+|+|++--..+. .......+.|+--.+. +.+++++|..+++.++..
T Consensus 81 ~~pii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 81 EIPIIMITAEGGK-AEVITALKAGVNNYIV-KPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEEESCCSH-HHHHHHHHHTCCEEEE-SCCCHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCCh-HHHHHHHHcCccEEEe-CCCCHHHHHHHHHHHhcc
Confidence 5788887544443 3334455567654554 356899999999998764
No 111
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=39.16 E-value=39 Score=17.04 Aligned_cols=50 Identities=8% Similarity=0.076 Sum_probs=32.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+.. ....+.+.|+--.+. +..+.+.|..+|++++....
T Consensus 88 ~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~~ 137 (152)
T 3eul_A 88 LPTRVLLISAHDEPA-IVYQALQQGAAGFLL-KDSTRTEIVKAVLDCAKGRD 137 (152)
T ss_dssp CSCEEEEEESCCCHH-HHHHHHHTTCSEEEE-TTCCHHHHHHHHHHHHHCC-
T ss_pred CCCeEEEEEccCCHH-HHHHHHHcCCCEEEe-cCCCHHHHHHHHHHHHcCCe
Confidence 367777775444443 334445667655554 35689999999999986643
No 112
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=39.02 E-value=24 Score=22.23 Aligned_cols=21 Identities=14% Similarity=0.358 Sum_probs=16.0
Q ss_pred CcHHHHHHHHHh----CC-ceeeecC
Q psy381 3 GGLQSLQEAFHY----GV-KLICIPM 23 (70)
Q Consensus 3 gG~~t~~e~l~~----g~-P~l~~P~ 23 (70)
||=||++.++.. ++ |++.++.
T Consensus 122 GGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 122 GGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp ESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred eCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 788999988643 56 7888874
No 113
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=38.52 E-value=18 Score=21.58 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCChhhhhc
Q psy381 51 DNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 51 ~~l~~~i~~~l~~~~~~~~ 69 (70)
++|.+++.+++.++++++.
T Consensus 244 ~~l~~al~~~~~~~~~~~~ 262 (301)
T 2qpq_A 244 QKLYDGIAKVMQRDDVQKK 262 (301)
T ss_dssp HHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHH
Confidence 5788889999999998875
No 114
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=38.52 E-value=35 Score=17.29 Aligned_cols=29 Identities=17% Similarity=0.132 Sum_probs=17.0
Q ss_pred HHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 35 AKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 35 ~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
.-.|++.+.. .-+++++.+++++++.+++
T Consensus 25 rLaGi~~~~~--~~~~ee~~~~~~~l~~~~d 53 (102)
T 2i4r_A 25 MLAGISDIYE--VTSDEEIVKAVEDVLKRDD 53 (102)
T ss_dssp HHTTCCCEEE--CCSHHHHHHHHHHHHHCSS
T ss_pred HHcCCCcccC--CCCHHHHHHHHHHHhhCCC
Confidence 3345554441 1257777777777776643
No 115
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=38.37 E-value=40 Score=18.49 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=32.0
Q ss_pred HhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 13 HYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 13 ~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
...+|+|++--..+.. ....+.+.|+--.+. +..+.+.|..+|+.++...
T Consensus 81 ~~~~~ii~lt~~~~~~-~~~~~~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~~ 130 (225)
T 3klo_A 81 CPDAKEVIINCPQDIE-HKLLFKWNNLAGVFY-IDDDMDTLIKGMSKILQDE 130 (225)
T ss_dssp CTTCEEEEEEECTTCC-HHHHTTSTTEEEEEE-TTCCHHHHHHHHHHHHTTC
T ss_pred CCCCcEEEEECCcchh-HHHHHHHhCCCEEEe-cCCCHHHHHHHHHHHHCCC
Confidence 3478888885433322 334444566654554 3568999999999988653
No 116
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=38.34 E-value=55 Score=18.56 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 28 DLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 28 ~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..|+.+-++.|.--++-....+.+.|...+++-+.|.
T Consensus 127 ~LN~~Ye~kFGfpFVi~v~G~s~~~IL~~l~~Rl~nd 163 (189)
T 3o7i_A 127 EGNARYEARFGRVFLIRAKGRSGEEILQALTRRLQHT 163 (189)
T ss_dssp HHHHHHHHHHSSCCCCCCTTCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCceEEecCCCCHHHHHHHHHHHHCCC
Confidence 4688888888887776655668888888888777764
No 117
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=38.23 E-value=68 Score=19.59 Aligned_cols=60 Identities=15% Similarity=0.062 Sum_probs=38.1
Q ss_pred CCcHHHHHHHHHhCCceeeecC-CCChHHHHHHHHH-----hCceeEe-cCCCCCHHHHHHHHHHHh
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM-FGDQDLNAQRIAK-----IKTGVVL-EFDNLNEDNIYDALITVL 61 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~-~~dq~~na~~~~~-----~g~g~~~-~~~~~~~~~l~~~i~~~l 61 (70)
|+||-+..-+++.|.-.+.+|- ..|...-...+.+ .+.++++ .++-.....+.+.+.+-+
T Consensus 172 ~aG~lA~~a~la~ga~~iliPE~~~~~~~~~~~i~~~~~~g~~~~iivvaEG~~~~~~~~~~~~~~~ 238 (319)
T 4a3s_A 172 HAGDIALWAGLAGGAESILIPEADYDMHEIIARLKRGHERGKKHSIIIVAEGVGSGVEFGKRIEEET 238 (319)
T ss_dssp TCCHHHHHHHHHHTCSEEEBTTBCCCHHHHHHHHHHHHTTTCCCEEEEEETTTCCHHHHHHHHHHHH
T ss_pred chhHHHHHHHhccCCCEEEecCCCCCHHHHHHHHHHHHHcCCCceEEEEECCCCcchHHHHHHHHhC
Confidence 7899999999999999999986 3344444444332 3445544 333335566666665544
No 118
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=37.86 E-value=22 Score=18.03 Aligned_cols=19 Identities=21% Similarity=0.212 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhCChhhhhc
Q psy381 51 DNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 51 ~~l~~~i~~~l~~~~~~~~ 69 (70)
++..+.+.++++||..++.
T Consensus 19 ~~~~~~~~~vl~dP~V~~F 37 (106)
T 2k7r_A 19 KRLEQMKEKVMKDQDVQAF 37 (106)
T ss_dssp HHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHH
Confidence 4566788899999987764
No 119
>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=37.48 E-value=19 Score=21.69 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhCChhhhhc
Q psy381 51 DNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 51 ~~l~~~i~~~l~~~~~~~~ 69 (70)
++|.+++.+++.++++++.
T Consensus 257 ~~l~~al~~~~~~p~~~~~ 275 (314)
T 2dvz_A 257 NKLRDAAVVALKDPKVIKA 275 (314)
T ss_dssp HHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHH
Confidence 5688888899999998875
No 120
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=37.43 E-value=39 Score=16.59 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=32.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
..+|+|++--..+. .......+.|+--.+. +.++.+.|..++++++....
T Consensus 74 ~~~~ii~~s~~~~~-~~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~~~~~~ 123 (132)
T 3crn_A 74 PGMKKIMVTGYASL-ENSVFSLNAGADAYIM-KPVNPRDLLEKIKEKLDEQE 123 (132)
T ss_dssp TTSEEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeccccH-HHHHHHHhccchhhcc-CCCCHHHHHHHHHHHHhccc
Confidence 46788887544443 3444455567654444 35689999999998875433
No 121
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=37.37 E-value=32 Score=17.72 Aligned_cols=48 Identities=23% Similarity=0.223 Sum_probs=28.9
Q ss_pred HHHHHhCCceeee-cCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 9 QEAFHYGVKLICI-PMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 9 ~e~l~~g~P~l~~-P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
-.|.-.|+|++.+ |+..+ . --..+.+.+..++- .+.+.|.++|+..++
T Consensus 61 ~~A~~~gkpIigV~~~g~~-~-~P~~l~~~a~~iV~----Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 61 DLARKSSKPIITVRPYGLE-N-VPPELEAVSSEVVG----WNPHCIRDALEDALD 109 (111)
T ss_dssp HHHTTTTCCEEEECCSSSS-C-CCTTHHHHCSEEEC----SCHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEEEcCCCC-c-CCHHHHhhCceecc----CCHHHHHHHHHhccC
Confidence 3455679999998 55432 1 11124444444433 378999999988764
No 122
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=37.35 E-value=28 Score=20.06 Aligned_cols=21 Identities=19% Similarity=0.282 Sum_probs=15.3
Q ss_pred CCcHHHHHHHH---H-------hCCceeeec
Q psy381 2 QGGLQSLQEAF---H-------YGVKLICIP 22 (70)
Q Consensus 2 hgG~~t~~e~l---~-------~g~P~l~~P 22 (70)
.||.||+-|.. . .++|++++-
T Consensus 139 pGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 139 PGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp SCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred CCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 47888887653 3 369999885
No 123
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=37.21 E-value=20 Score=21.64 Aligned_cols=19 Identities=37% Similarity=0.440 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCChhhhhc
Q psy381 51 DNIYDALITVLEDPIFQFF 69 (70)
Q Consensus 51 ~~l~~~i~~~l~~~~~~~~ 69 (70)
++|.+++.+++.++++++.
T Consensus 253 ~~l~~al~~~~~~p~~~~~ 271 (312)
T 2f5x_A 253 DKLVKSLQAGLADPKFQER 271 (312)
T ss_dssp HHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHH
Confidence 5688889999999998875
No 124
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=37.04 E-value=41 Score=16.73 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=32.7
Q ss_pred hCCceeeecCCCChHH-HHHH--HHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDL-NAQR--IAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~-na~~--~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
.|+|.++.-....|.. |-.. ..+.|+.--+- +..++++|...+++.+.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvl-kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-ccCCHHHHHHHHHHHHH
Confidence 5999999888787754 3332 33357665443 24479999999988864
No 125
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.87 E-value=43 Score=16.92 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=32.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|+.++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIA-KPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEe-CCCCHHHHHHHHHHHHHHH
Confidence 4788888854333 33444555667655554 3568999999998887543
No 126
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=35.48 E-value=18 Score=18.07 Aligned_cols=51 Identities=12% Similarity=0.054 Sum_probs=29.3
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+.++....+
T Consensus 75 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~~ 125 (140)
T 3n53_A 75 KNVPLILLFSSEHK-EAIVNGLHSGADDYLT-KPFNRNDLLSRIEIHLRTQNY 125 (140)
T ss_dssp TTCCEEEEECC-----CTTTTTTCCCSEEEE-SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCH-HHHHHHHhcCCCeeee-CCCCHHHHHHHHHHHHhhHHH
Confidence 46787777433222 2222333456544444 356899999999998865443
No 127
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=35.44 E-value=59 Score=18.06 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 28 DLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 28 ~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..|+.+-++.|.--++--...+.+.|...+++-+.|.
T Consensus 106 ~lN~~Y~~kFGfpFvi~v~g~s~~~IL~~l~~Rl~n~ 142 (174)
T 2o70_A 106 RLNSEYKERFGFPFVICARLNNKADIVRQLSERLKNR 142 (174)
T ss_dssp HHHHHHHHHHSSCCCCCGGGCCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHCCCeEEEeeCCCCHHHHHHHHHHHHcCC
Confidence 4688888888877666555567888888888777664
No 128
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=34.87 E-value=50 Score=18.74 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=22.8
Q ss_pred HHHHhCCceeeecCCC-C---hHHHHHHHHHhCcee
Q psy381 10 EAFHYGVKLICIPMFG-D---QDLNAQRIAKIKTGV 41 (70)
Q Consensus 10 e~l~~g~P~l~~P~~~-d---q~~na~~~~~~g~g~ 41 (70)
.++..++|++++|-.. . ...|...+.+.|+-+
T Consensus 109 v~L~~~~plvl~Pa~m~~~~~~~~N~~~L~~~G~~i 144 (197)
T 1sbz_A 109 VVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAM 144 (197)
T ss_dssp HHHHHTCEEEEEECCSSBCHHHHHHHHHHHTTTCEE
T ss_pred HHHhcCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
Confidence 3467899999999732 2 457888888888443
No 129
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=34.65 E-value=24 Score=20.15 Aligned_cols=29 Identities=7% Similarity=0.043 Sum_probs=21.2
Q ss_pred hCCceeeecCC-------CChHHHHHHHHHhCceeE
Q psy381 14 YGVKLICIPMF-------GDQDLNAQRIAKIKTGVV 42 (70)
Q Consensus 14 ~g~P~l~~P~~-------~dq~~na~~~~~~g~g~~ 42 (70)
.++|++++|-. .-...|...+.+.|+-++
T Consensus 131 ~~~pvvlaPaMn~~m~~~p~~~~Nl~~L~~~G~~iv 166 (206)
T 1qzu_A 131 RSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEI 166 (206)
T ss_dssp TTSCCCEEECCCHHHHTSSTHHHHHHHHHTTCCCCC
T ss_pred CCCCEEEEecCCccccCCHHHHHHHHHHHHCCCEEE
Confidence 68999999942 223678888888877543
No 130
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=34.44 E-value=60 Score=17.86 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 28 DLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 28 ~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..|+.+-++.|.--++--...+.+.|...+++-+.|.
T Consensus 102 ~lN~~Ye~kFGfpFvi~v~g~~~~~Il~~l~~Rl~nd 138 (165)
T 2o8i_A 102 QLNSAYTEKFGFPFIIAVKGLNRHDILSAFDTRIDNN 138 (165)
T ss_dssp HHHHHHHHHHSSCCCCCCTTCCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCeeEeeeCCCCHHHHHHHHHHHHCCC
Confidence 4688888888887666555668888888888777664
No 131
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=34.31 E-value=30 Score=19.03 Aligned_cols=20 Identities=25% Similarity=0.582 Sum_probs=13.8
Q ss_pred CCcHHHHHHH---HH-------hCCceeeec
Q psy381 2 QGGLQSLQEA---FH-------YGVKLICIP 22 (70)
Q Consensus 2 hgG~~t~~e~---l~-------~g~P~l~~P 22 (70)
.||.||+-|. +. +++| +++-
T Consensus 105 pGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 105 PGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp SCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred CCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 4788887555 44 6899 7663
No 132
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=33.85 E-value=44 Score=16.13 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=26.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+... . .....|+--.+. +.++.++|.+.++......
T Consensus 76 ~~~~ii~~s~~~~~~~-~-~~~~~g~~~~l~-KP~~~~~L~~~i~~~~~~~ 123 (127)
T 3i42_A 76 KTSKFVAVSGFAKNDL-G-KEACELFDFYLE-KPIDIASLEPILQSIEGHH 123 (127)
T ss_dssp SCCEEEEEECC-CTTC-C-HHHHHHCSEEEE-SSCCHHHHHHHHHHHC---
T ss_pred CCCCEEEEECCcchhH-H-HHHHHhhHHhee-CCCCHHHHHHHHHHhhccC
Confidence 3578877754443333 2 223334433333 3568999999999887553
No 133
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=32.93 E-value=47 Score=16.19 Aligned_cols=49 Identities=2% Similarity=-0.002 Sum_probs=29.3
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+... .....+.|+--.+. +.++.+.|...++.++...
T Consensus 74 ~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~ 122 (136)
T 1mvo_A 74 LMFPILMLTAKDEEFD-KVLGLELGADDYMT-KPFSPREVNARVKAILRRS 122 (136)
T ss_dssp CCCCEEEEECTTCCCC-HHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHH-HHHHHhCCCCEEEE-CCCCHHHHHHHHHHHHHhh
Confidence 3577777744333322 23334566644444 3568999999999887543
No 134
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=32.74 E-value=32 Score=16.04 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=25.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+.. ...+.|+--.+. +.++.+.|...+++++.
T Consensus 74 ~~~~ii~~~~~~~~~----~~~~~g~~~~l~-kp~~~~~l~~~l~~~~~ 117 (119)
T 2j48_A 74 PHPPLVLFLGEPPVD----PLLTAQASAILS-KPLDPQLLLTTLQGLCP 117 (119)
T ss_dssp SSCCCEEEESSCCSS----HHHHHHCSEECS-SCSTTHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCCch----hhhhcCHHHhcc-CCCCHHHHHHHHHHHhc
Confidence 457777764333322 334455544444 35578888888887664
No 135
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.64 E-value=47 Score=16.09 Aligned_cols=50 Identities=10% Similarity=0.184 Sum_probs=28.4
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCC-CHHHHHHHHHHHhCChhh
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNL-NEDNIYDALITVLEDPIF 66 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~-~~~~l~~~i~~~l~~~~~ 66 (70)
.+|+|++--..+. .....+.+.|+--.+.. .+ +.+.|..+++.++....|
T Consensus 79 ~~~ii~~t~~~~~-~~~~~~~~~g~~~~l~K-P~~~~~~l~~~i~~~l~~~~~ 129 (130)
T 3eod_A 79 QTPVLVISATENM-ADIAKALRLGVEDVLLK-PVKDLNRLREMVFACLYPSMF 129 (130)
T ss_dssp CCCEEEEECCCCH-HHHHHHHHHCCSEEEES-CC---CHHHHHHHHHHC----
T ss_pred CCCEEEEEcCCCH-HHHHHHHHcCCCEEEeC-CCCcHHHHHHHHHHHhchhhc
Confidence 5788877544443 33444556676555542 34 688999999999876543
No 136
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=32.29 E-value=80 Score=18.63 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=30.6
Q ss_pred hCCceeeecCCCChH-----HHHHHHHHhCc-eeEecC------------CCCCHHHHHHHHHHHh
Q psy381 14 YGVKLICIPMFGDQD-----LNAQRIAKIKT-GVVLEF------------DNLNEDNIYDALITVL 61 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~-----~na~~~~~~g~-g~~~~~------------~~~~~~~l~~~i~~~l 61 (70)
++.|+++-|-+..-. .-++.....|+ |++++. ..+++++|.+.++++.
T Consensus 191 ~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 191 SHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELE 256 (262)
T ss_dssp BSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHH
T ss_pred hCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHH
Confidence 489988888753211 33555666776 555542 2367888888887764
No 137
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=32.17 E-value=85 Score=18.92 Aligned_cols=55 Identities=9% Similarity=0.103 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCceeeecCCC-ChHHHHHHHHHhC-ceeEecCCCCCHHHHHHHHHHHh
Q psy381 6 QSLQEAFHYGVKLICIPMFG-DQDLNAQRIAKIK-TGVVLEFDNLNEDNIYDALITVL 61 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~-dq~~na~~~~~~g-~g~~~~~~~~~~~~l~~~i~~~l 61 (70)
+.+.+.+-...|++.-|+.. --...+..+.+.| +|.+. ....+++.+.+.++++.
T Consensus 17 t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~-~~~~~~~~l~~~i~~i~ 73 (326)
T 3bo9_A 17 TRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIG-SGAMKPDDLRKAISELR 73 (326)
T ss_dssp CHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEE-CTTCCHHHHHHHHHHHH
T ss_pred chhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeC-CCCCCHHHHHHHHHHHH
Confidence 34677788899999999854 2244566666665 46554 35568888888877764
No 138
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=31.80 E-value=36 Score=22.20 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=15.6
Q ss_pred CCcHHHHHHHH---H---------hCCceeee
Q psy381 2 QGGLQSLQEAF---H---------YGVKLICI 21 (70)
Q Consensus 2 hgG~~t~~e~l---~---------~g~P~l~~ 21 (70)
.||.||+-|.. . ..+|++++
T Consensus 253 PGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 253 PGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp SCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred CCCcchHHHHHHHHHHHhhccccCCCCCEEEE
Confidence 48999997763 2 48899998
No 139
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=31.66 E-value=52 Score=16.28 Aligned_cols=48 Identities=8% Similarity=0.080 Sum_probs=31.4
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
.+|+|++--..+. .......+.|+--.+. +.++.++|...|++++...
T Consensus 78 ~~pii~~t~~~~~-~~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 78 TLPILMLTAQGDI-SAKIAGFEAGANDYLA-KPFEPQELVYRVKNILART 125 (136)
T ss_dssp TCCEEEEECTTCH-HHHHHHHHHTCSEEEE-TTCCHHHHHHHHHHHHHC-
T ss_pred CccEEEEecCCCH-HHHHHHHhcCcceEEe-CCCCHHHHHHHHHHHHhcc
Confidence 6788887544443 3344455567655554 3568999999999987653
No 140
>2qai_A V-type ATP synthase subunit F; VATF_pyrfu, ATPF, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Pyrococcus furiosus}
Probab=31.51 E-value=51 Score=16.99 Aligned_cols=33 Identities=12% Similarity=-0.048 Sum_probs=18.2
Q ss_pred HHHhCceeEec--CCCCCHHHHHHHHHHHhCChhh
Q psy381 34 IAKIKTGVVLE--FDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 34 ~~~~g~g~~~~--~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
+.-.|++..+- ..+.+.+++.+++++++.+++|
T Consensus 15 FrLaGi~~~~v~~~~~t~~ee~~~~~~~l~~~~di 49 (111)
T 2qai_A 15 FRLAGVHEAYEYDESLESVERARNKLRELLERDDV 49 (111)
T ss_dssp HHHHTCSEEEECCSSHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHcCCceEEEecCCCCCHHHHHHHHHHHhhCCCe
Confidence 34446654433 1112237788888888776543
No 141
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=31.35 E-value=53 Score=16.26 Aligned_cols=46 Identities=13% Similarity=0.194 Sum_probs=29.5
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
.+|+|++--..+ ........+.|+--.+. +.++.+.|...++.++.
T Consensus 75 ~~~ii~ls~~~~-~~~~~~~~~~ga~~~l~-KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 75 TCPIVYMTYINE-DQSILNALNSGGDDYLI-KPLNLEILYAKVKAILR 120 (136)
T ss_dssp CCCEEEEESCCC-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCC-HHHHHHHHHcCCcEEEE-CCCCHHHHHHHHHHHHH
Confidence 578777754444 33444555667654554 35689999999988764
No 142
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=31.22 E-value=63 Score=17.14 Aligned_cols=47 Identities=11% Similarity=0.214 Sum_probs=28.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|...++.++.
T Consensus 78 ~~~~ii~lt~~~~~-~~~~~a~~~ga~~~l~-KP~~~~~L~~~l~~~~~ 124 (196)
T 1qo0_D 78 PRTTLVALVEYESP-AVLSQIIELECHGVIT-QPLDAHRVLPVLVSARR 124 (196)
T ss_dssp TTCEEEEEECCCSH-HHHHHHHHHTCSEEEE-SSCCGGGHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCh-HHHHHHHHcCCCeeEe-cCcCHHHHHHHHHHHHH
Confidence 46888887544443 3455556677654443 24567777777766653
No 143
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=30.82 E-value=36 Score=20.04 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCceeeecC
Q psy381 6 QSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~ 23 (70)
+..+|+..+|+|.|.+-.
T Consensus 110 gAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 110 SGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEc
Confidence 667999999999999975
No 144
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=30.39 E-value=42 Score=18.36 Aligned_cols=18 Identities=6% Similarity=-0.029 Sum_probs=14.4
Q ss_pred HHHHHHH---HHhCCceeeec
Q psy381 5 LQSLQEA---FHYGVKLICIP 22 (70)
Q Consensus 5 ~~t~~e~---l~~g~P~l~~P 22 (70)
.||.+|. .+.|+|++++-
T Consensus 85 ~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 85 CGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred CcHHHHHHHHHHCCCEEEEEE
Confidence 5788886 56799999984
No 145
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=30.29 E-value=37 Score=20.00 Aligned_cols=19 Identities=5% Similarity=0.413 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCceeeecC
Q psy381 5 LQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~ 23 (70)
-+..+|+..+|+|.|.+-+
T Consensus 111 VgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 111 VAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEec
Confidence 3667999999999999976
No 146
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=30.17 E-value=1.1e+02 Score=19.55 Aligned_cols=53 Identities=11% Similarity=0.001 Sum_probs=39.1
Q ss_pred HHHHhCCceee-ecC-CCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 10 EAFHYGVKLIC-IPM-FGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 10 e~l~~g~P~l~-~P~-~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
-++..|+|.|= .|. ...-+.....+++.|+=+.=+..+.....+...+.+++.
T Consensus 188 AAl~ag~~fvN~~P~~~a~~P~~~ela~~~g~pi~GdD~KsGqT~~ks~La~~l~ 242 (392)
T 3qvs_A 188 AALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDGKTGETLVKTTLAPMFA 242 (392)
T ss_dssp HHHHTTCCEEECSSSCTTCSHHHHHHHHHHTCEEECSSBCCSHHHHHHHHHHHHH
T ss_pred HHHHcCCCeeecCCccccCCHHHHHHHHHcCCCEecCcccCCCchHHHHHHHHHH
Confidence 56777999994 587 467788999999999887666555456667777777664
No 147
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=30.06 E-value=98 Score=18.97 Aligned_cols=60 Identities=15% Similarity=0.117 Sum_probs=38.3
Q ss_pred CCcHHHHHHHHHhCCceeeecCC-CChHHHHHHHHH-----hCceeEe-cCCCCCHHHHHHHHHHHh
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMF-GDQDLNAQRIAK-----IKTGVVL-EFDNLNEDNIYDALITVL 61 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~-~dq~~na~~~~~-----~g~g~~~-~~~~~~~~~l~~~i~~~l 61 (70)
|+||-++..+++.|.-.+.+|-. .+...-+..+.+ .+-++++ .++-.+.+.|.+.+++-+
T Consensus 173 ~aG~lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~~~~~~gk~~~iIvvaEG~~~~~~la~~i~~~~ 239 (320)
T 1pfk_A 173 YCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKET 239 (320)
T ss_dssp TCCHHHHHHHHHTTCSEEECTTSCCCHHHHHHHHHHHHHTTCSCEEEEEESSSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEeCCcchHHHHHHHHHHHh
Confidence 78999999999999999999852 333222222222 3455554 333336777877777643
No 148
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=30.05 E-value=38 Score=19.99 Aligned_cols=19 Identities=16% Similarity=0.156 Sum_probs=16.3
Q ss_pred HHHHHHHHHhCCceeeecC
Q psy381 5 LQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~ 23 (70)
-+..+|+...|+|.|.+-+
T Consensus 110 VgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 110 VSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEec
Confidence 3567999999999999976
No 149
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=29.92 E-value=14 Score=20.78 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=14.9
Q ss_pred CCcHHHHHHHHHhCCceeeecCCC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMFG 25 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~~ 25 (70)
+||........ ..+|++-+|...
T Consensus 58 RGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 58 RGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp EHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CChHHHHHHHh-CCCCEEEEcCCH
Confidence 45555555543 479999998743
No 150
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=29.78 E-value=1.1e+02 Score=20.03 Aligned_cols=38 Identities=11% Similarity=0.234 Sum_probs=28.5
Q ss_pred CCcHHHHHHHHHhCCceeeecCCCCh---HHHHHHHHHhCc
Q psy381 2 QGGLQSLQEAFHYGVKLICIPMFGDQ---DLNAQRIAKIKT 39 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~~~dq---~~na~~~~~~g~ 39 (70)
|+...-+.+.+..=.|-.++|.++|. ..+++.+++.|+
T Consensus 368 Ha~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 368 HGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGI 408 (555)
T ss_dssp SCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC
Confidence 67777777777766899999999884 446776766775
No 151
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=29.38 E-value=43 Score=23.34 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=20.5
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 201 ~aG~LAl~agLA~gAd~ilIPE 222 (787)
T 3o8o_A 201 HCGWLALMAGIATGADYIFIPE 222 (787)
T ss_dssp TCCHHHHHHHHHTTCSEEECGG
T ss_pred chhHHHHHHHHhhCCCEEEeCC
Confidence 7999999999999999999985
No 152
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=29.33 E-value=56 Score=15.98 Aligned_cols=47 Identities=13% Similarity=0.117 Sum_probs=30.8
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++..
T Consensus 87 ~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 87 TVPLIAVSDELTS-EQTRVLVRMNASDWLH-KPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp TCCEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHTC--
T ss_pred CCcEEEEeCCCCH-HHHHHHHHcCcHhhcc-CCCCHHHHHHHHHHHhcc
Confidence 6888888544443 3444555677655555 366899999999988753
No 153
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=29.26 E-value=97 Score=20.25 Aligned_cols=53 Identities=15% Similarity=-0.028 Sum_probs=29.0
Q ss_pred HHhCCceeee-cCC-CChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 12 FHYGVKLICI-PMF-GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 12 l~~g~P~l~~-P~~-~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
-..|++.+++ |.. .............|.++.+-.-+-+.++-.+.++++..+.
T Consensus 174 ~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g~fdda~~~vk~l~~~~ 228 (514)
T 1kl7_A 174 GKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDK 228 (514)
T ss_dssp TCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHHHHHHHHHHCS
T ss_pred hhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCCCHHHHHHHHHHHHhcc
Confidence 3467887665 875 4444444444435665544332225666666666666553
No 154
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=29.12 E-value=58 Score=16.02 Aligned_cols=47 Identities=6% Similarity=0.109 Sum_probs=31.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+ ........+.|+--.+. +.++.+.|...|++++.
T Consensus 91 ~~~~ii~~t~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 91 KKIPVVIMTTSSN-PKDIEICYSYSISSYIV-KPLEIDRLTETVQTFIK 137 (149)
T ss_dssp GGSCEEEEESCCC-HHHHHHHHHTTCSEEEE-CCSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCC-HHHHHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 4678888754444 33444555667655555 35689999999988874
No 155
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=29.05 E-value=41 Score=19.99 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCceeeecC
Q psy381 6 QSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~ 23 (70)
+..+|+...|+|.|.+-.
T Consensus 110 gAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 110 SGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEc
Confidence 556999999999999975
No 156
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=29.03 E-value=7.4 Score=25.98 Aligned_cols=53 Identities=6% Similarity=-0.104 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCceeeecCCCChHHHH-HH----HHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 6 QSLQEAFHYGVKLICIPMFGDQDLNA-QR----IAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 6 ~t~~e~l~~g~P~l~~P~~~dq~~na-~~----~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
+.+.|.+..++|+|+.....+++.+- +- +.+.--|.++. +.++|.++|.+...
T Consensus 625 Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~----~~~eL~~~i~~~~~ 682 (729)
T 3l7i_A 625 SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYT----EPYGLAKELKNLDK 682 (729)
T ss_dssp THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEES----SHHHHHHHHTTHHH
T ss_pred HHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeEC----CHHHHHHHHhhhhc
Confidence 45789999999999997766654321 00 01111233333 67888888876653
No 157
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=28.82 E-value=54 Score=18.26 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=30.7
Q ss_pred HHhCCceeeecCCCC-------hHHHHHHHHHhCceeEecC-C---------------CCCHHHHHHHHHHHh
Q psy381 12 FHYGVKLICIPMFGD-------QDLNAQRIAKIKTGVVLEF-D---------------NLNEDNIYDALITVL 61 (70)
Q Consensus 12 l~~g~P~l~~P~~~d-------q~~na~~~~~~g~g~~~~~-~---------------~~~~~~l~~~i~~~l 61 (70)
+..++|++++|-... ...|...+.+.|+-++-+. + -.+++++.+.+.+.+
T Consensus 104 la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~lacg~~~g~g~~~~~~~iv~~v~~~l 176 (181)
T 1g63_A 104 LTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSFEISSGRYKNNITMPNIENVLNFVLNNE 176 (181)
T ss_dssp HHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTTTCEECCCEECC----------CCEECCCHHHHHHHHHC--
T ss_pred HHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCCEEECCCCCcccccccCCccCCcCCCCHHHHHHHHHHHh
Confidence 667999999995321 2568888888876443111 1 125677777766555
No 158
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=28.23 E-value=45 Score=23.12 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=20.5
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 200 ~aG~LAl~aglA~gAd~ilIPE 221 (766)
T 3o8o_B 200 NCGWLALLAGIATSADYIFIPE 221 (766)
T ss_dssp TCCHHHHHHHHHHTCSEEECTT
T ss_pred chhHHHHHHHHhcCCCEEEccC
Confidence 7999999999999999999985
No 159
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=28.19 E-value=48 Score=21.70 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=20.0
Q ss_pred CCcHHHHHHHHHhC-CceeeecC
Q psy381 2 QGGLQSLQEAFHYG-VKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g-~P~l~~P~ 23 (70)
|+|+-++.-+++.| .-.+.+|-
T Consensus 275 ~aG~LAl~agLA~g~ad~ilIPE 297 (487)
T 2hig_A 275 DSGFIAAQAAVASAQANICLVPE 297 (487)
T ss_dssp SCCHHHHHHHHHHTCCSEEECTT
T ss_pred CHHHHHHHHHHhhCCCCEEEeCC
Confidence 78999999999999 88888885
No 160
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=28.17 E-value=42 Score=20.21 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCceeeecCC
Q psy381 5 LQSLQEAFHYGVKLICIPMF 24 (70)
Q Consensus 5 ~~t~~e~l~~g~P~l~~P~~ 24 (70)
-+..+|+...|+|.|.+-+.
T Consensus 109 VgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 109 LGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHcCCCeEEEEcc
Confidence 36679999999999999763
No 161
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=28.14 E-value=62 Score=16.05 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=31.8
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++..
T Consensus 94 ~~~~ii~lt~~~~~-~~~~~~~~~ga~~~l~-Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 94 PGLTCLLVTTDASS-QTLLDAMRAGVRDVLR-WPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp TTCEEEEEESCCCH-HHHHHHHTTTEEEEEE-SSCCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEeCCCCH-HHHHHHHHhCCceeEc-CCCCHHHHHHHHHHHHhh
Confidence 36888887544443 3344445667655555 356899999999998754
No 162
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=27.70 E-value=92 Score=17.90 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=7.3
Q ss_pred HHHHhCCceeeecCC
Q psy381 10 EAFHYGVKLICIPMF 24 (70)
Q Consensus 10 e~l~~g~P~l~~P~~ 24 (70)
.+...|+|+.++...
T Consensus 206 ~a~~~gv~v~I~~g~ 220 (240)
T 4a7w_A 206 LAKDNKLPIVVCNMF 220 (240)
T ss_dssp HHHHTTCCEEEEESS
T ss_pred HHHHCCCeEEEECCC
Confidence 344455555555443
No 163
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.69 E-value=63 Score=15.98 Aligned_cols=48 Identities=17% Similarity=0.140 Sum_probs=30.6
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|...|+.++..
T Consensus 75 ~~~~ii~ls~~~~-~~~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 75 IPTSVIIATAHGS-VDLAVNLIQKGAEDFLE-KPINADRLKTSVALHLKR 122 (137)
T ss_dssp CCCEEEEEESSCC-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCc-HHHHHHHHHCCccEEEe-CCCCHHHHHHHHHHHHHH
Confidence 3577777754443 33444555667654554 356899999999888753
No 164
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=27.66 E-value=55 Score=15.38 Aligned_cols=44 Identities=11% Similarity=0.223 Sum_probs=24.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVL 61 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l 61 (70)
...|++++--..+.. ....+.|+--.+. +..+.+.|...+++++
T Consensus 72 ~~~~ii~~s~~~~~~---~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~ 115 (116)
T 3a10_A 72 KDAKIILLTAYSHYR---SDMSSWAADEYVV-KSFNFDELKEKVKKLL 115 (116)
T ss_dssp TTCCEEEEESCGGGG---GCGGGGGSSEEEE-CCSSTHHHHHHHHHHT
T ss_pred CCCeEEEEECCcchH---HHHHhccccceEE-CCCCHHHHHHHHHHHh
Confidence 356777764333222 2233345433443 3557888888888765
No 165
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.33 E-value=62 Score=15.82 Aligned_cols=47 Identities=2% Similarity=-0.089 Sum_probs=31.5
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCC-CHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNL-NEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~-~~~~l~~~i~~~l~~ 63 (70)
.+|+|++--..+ ......+.+.|+--.+. +.+ +.+.|..+|+.++..
T Consensus 86 ~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 86 SIVVLVSSDNPT-SEEEVHAFEQGADDYIA-KPYRSIKALVARIEARLRF 133 (137)
T ss_dssp TSEEEEEESSCC-HHHHHHHHHTTCSEEEE-SSCSCHHHHHHHHHHHTC-
T ss_pred CccEEEEeCCCC-HHHHHHHHHcCCceeee-CCCCCHHHHHHHHHHHHhh
Confidence 788888854444 33444555667655555 366 899999999988754
No 166
>4f43_A Protelomerase; recombination-DNA complex; HET: DNA; 2.35A {Agrobacterium tumefaciens} PDB: 4f41_A*
Probab=27.13 E-value=1e+02 Score=19.12 Aligned_cols=54 Identities=15% Similarity=0.004 Sum_probs=36.7
Q ss_pred HHHHhCCceeeecCCC-ChHHH------HHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhhh
Q psy381 10 EAFHYGVKLICIPMFG-DQDLN------AQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIFQ 67 (70)
Q Consensus 10 e~l~~g~P~l~~P~~~-dq~~n------a~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~~ 67 (70)
|++-..-|+|.+-.+. ++..- .+...++|..+.++ +++.+.+....+|.+.++.
T Consensus 81 ~~~~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~k~~~~i~i~----d~~~iv~~~~~LL~S~d~~ 141 (320)
T 4f43_A 81 EAFGDDHPMLKIATGDAAMYDEARRVKMEKIANKHGALITFE----NYRQVLKICEDCLKSSDPL 141 (320)
T ss_dssp HHTCTTCTHHHHSCCCHHHHHHHHHHHHHHHHHHHTSCEECT----THHHHHHHHHHHTTCSSHH
T ss_pred HHhCCCCchHhhccCCHHHHhHHHhccchhhhhcccCeeecC----CHHHHHHHHHHHhccCCHH
Confidence 6666677887764432 22222 23345578887777 7999999999999887664
No 167
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=26.95 E-value=61 Score=15.63 Aligned_cols=48 Identities=13% Similarity=0.231 Sum_probs=27.9
Q ss_pred CceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChhh
Q psy381 16 VKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPIF 66 (70)
Q Consensus 16 ~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~~ 66 (70)
.|++++....+. ....+.+.|+--.+. +.++.++|..+|++......+
T Consensus 81 ~~ii~~~~~~~~--~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~~ 128 (132)
T 3lte_A 81 PKILVVSGLDKA--KLQQAVTEGADDYLE-KPFDNDALLDRIHDLVNEGHH 128 (132)
T ss_dssp CEEEEECCSCSH--HHHHHHHHTCCEEEC-SSCCHHHHHHHHHHHHC----
T ss_pred CeEEEEeCCChH--HHHHHHHhChHHHhh-CCCCHHHHHHHHHHHcCCCCC
Confidence 444444433333 444555667655555 456899999999998875543
No 168
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=26.87 E-value=1.4e+02 Score=19.75 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=30.3
Q ss_pred HHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 7 SLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 7 t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
....++.+|+=++++|...+... ..+.+ -+..+.++.++|.+++++++.
T Consensus 296 aa~~Al~AG~Dm~l~~~~~~~~~--~~l~~-----AV~~G~i~e~rId~av~RIL~ 344 (535)
T 3sql_A 296 VVVQAIAAGADILLMPPDVDGAI--IAIET-----AIKTGQLSESRIYESVERIWQ 344 (535)
T ss_dssp HHHHHHHHTCSBEESCSCHHHHH--HHHHH-----HHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCeecCCCCHHHHH--HHHHH-----HHHcCCCCHHHHHHHHHHHHH
Confidence 35677888999988875322211 11111 133356788999999998874
No 169
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=26.80 E-value=31 Score=17.32 Aligned_cols=10 Identities=10% Similarity=0.042 Sum_probs=4.8
Q ss_pred HHHHHHhCCc
Q psy381 8 LQEAFHYGVK 17 (70)
Q Consensus 8 ~~e~l~~g~P 17 (70)
+.-....|+-
T Consensus 12 v~GFrLaGi~ 21 (101)
T 2ov6_A 12 VTGFRLAGIS 21 (101)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHcCCC
Confidence 3444445555
No 170
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=26.43 E-value=51 Score=23.50 Aligned_cols=22 Identities=23% Similarity=0.293 Sum_probs=20.5
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 378 ~aG~LAl~agLA~GAd~IlIPE 399 (941)
T 3opy_B 378 HCGWLGLLAGLATSADYILIPE 399 (941)
T ss_dssp SCCHHHHHHHHHTTCSEEECTT
T ss_pred cccHHHHHHHHhcCCCEEEECC
Confidence 7999999999999999999985
No 171
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.19 E-value=68 Score=15.87 Aligned_cols=47 Identities=9% Similarity=0.083 Sum_probs=31.3
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+ ......+.+.|+--.+. +.++.+.|..+|+.++.
T Consensus 81 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 81 ASIPVIALSGRAT-AKEEAQLLDMGFIDFIA-KPVNAIRLSARIKRVLK 127 (147)
T ss_dssp TTSCEEEEESSCC-HHHHHHHHHHTCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC-HHHHHHHHhCCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 4688888865444 33444455677755554 35689999999988874
No 172
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=26.12 E-value=93 Score=17.41 Aligned_cols=32 Identities=22% Similarity=0.127 Sum_probs=22.5
Q ss_pred HHHhCCceeeecC-CCC---hHHHHHHHHHhCceeE
Q psy381 11 AFHYGVKLICIPM-FGD---QDLNAQRIAKIKTGVV 42 (70)
Q Consensus 11 ~l~~g~P~l~~P~-~~d---q~~na~~~~~~g~g~~ 42 (70)
++-.++|++++|- ... ...|...+.+.|+-++
T Consensus 114 ~lk~~~plvl~Pa~m~~~~~~~~N~~~L~~~G~~iv 149 (189)
T 2ejb_A 114 ALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVV 149 (189)
T ss_dssp HHHHTCCEEEEECCSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HccCCCcEEEEECCCCCCHHHHHHHHHHHHCCeEEe
Confidence 3445899999996 222 3568888888876655
No 173
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=25.83 E-value=39 Score=15.55 Aligned_cols=16 Identities=13% Similarity=0.272 Sum_probs=10.4
Q ss_pred HHHHHHHHH-hCChhhh
Q psy381 52 NIYDALITV-LEDPIFQ 67 (70)
Q Consensus 52 ~l~~~i~~~-l~~~~~~ 67 (70)
....+++.+ +.||.|+
T Consensus 23 sweqamr~i~i~DPrY~ 39 (59)
T 2b7e_A 23 SFSRIISELGTRDPRYW 39 (59)
T ss_dssp CHHHHHHHHHHHCTHHH
T ss_pred cHHHHHHHhccCCCccc
Confidence 355666677 6777765
No 174
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.80 E-value=65 Score=15.50 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=26.7
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
..+|+|++--..+...- ....+.| + .+. +.++.+.|..+|++++...
T Consensus 78 ~~~~ii~~s~~~~~~~~-~~~~~~~-~-~l~-kP~~~~~l~~~i~~~~~~~ 124 (132)
T 2rdm_A 78 PNMPIVYISGHAALEWA-SNGVPDS-I-ILE-KPFTSAQLITAVSQLLNAR 124 (132)
T ss_dssp TTCCEEEEESSCCTTHH-HHSCTTC-E-EEE-SSCCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCccHHHH-HhhcCCc-c-eEe-CCCCHHHHHHHHHHHHhcC
Confidence 36788887443332211 1111223 3 333 3568999999999987654
No 175
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=25.54 E-value=48 Score=19.67 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=16.7
Q ss_pred CcHHHHHHHHH------hCCceeeecC
Q psy381 3 GGLQSLQEAFH------YGVKLICIPM 23 (70)
Q Consensus 3 gG~~t~~e~l~------~g~P~l~~P~ 23 (70)
||-||+.|.+. .++|+.++|.
T Consensus 71 GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 71 GGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp ECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred ccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 67888888764 4688999998
No 176
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.46 E-value=76 Score=16.22 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=26.9
Q ss_pred CCceeeecCCCChHH---HHHHHHHhCceeEecCCCCCHHHHHHHHHHHh
Q psy381 15 GVKLICIPMFGDQDL---NAQRIAKIKTGVVLEFDNLNEDNIYDALITVL 61 (70)
Q Consensus 15 g~P~l~~P~~~dq~~---na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l 61 (70)
|..++++-+..||.. ..+.+.+.|..+.--. +++++.+.+.+++
T Consensus 75 gaqvliiiydqdqnrleefsrevrrrgfevrtvt---spddfkkslerli 121 (134)
T 2l69_A 75 GAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTVT---SPDDFKKSLERLI 121 (134)
T ss_dssp CCCCEEEEECSCHHHHHHHHHHHHHTTCCEEEES---SHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCchhHHHHHHHHHHhcCceEEEec---ChHHHHHHHHHHH
Confidence 555666655666643 3444555677655321 6888877777765
No 177
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=25.35 E-value=55 Score=22.69 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=20.4
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 576 ~aG~lAl~aglA~gad~ilIPE 597 (762)
T 3o8l_A 576 YCGYLATMAGLAAGADAAYIFE 597 (762)
T ss_dssp TCCHHHHHHHHHTTCSEEECSS
T ss_pred chhHHHHHHHHhhCCCEEEECC
Confidence 7999999999999999999984
No 178
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.04 E-value=76 Score=16.08 Aligned_cols=47 Identities=11% Similarity=0.211 Sum_probs=31.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++.
T Consensus 110 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 110 KNARVIMISALGKE-QLVKDCLIKGAKTFIV-KPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp TTCCEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHTTC
T ss_pred CCCcEEEEeccCcH-HHHHHHHHcCCCEEEe-CCCCHHHHHHHHHHHhc
Confidence 46888887544443 3344455667654554 35689999999998874
No 179
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=24.89 E-value=30 Score=20.90 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=20.4
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEF 45 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~ 45 (70)
.+|.+++|...--..+...+.++|+.+++-.
T Consensus 204 ~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~ 234 (287)
T 3b8i_A 204 HIPLMLVTYGNPQLRDDARLARLGVRVVVNG 234 (287)
T ss_dssp CSCEEEECTTCGGGCCHHHHHHTTEEEEECC
T ss_pred CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEC
Confidence 5788865543333455778888888877754
No 180
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=24.69 E-value=57 Score=23.41 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=20.6
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 406 ~aG~LAl~agLA~GAd~IlIPE 427 (989)
T 3opy_A 406 HCGWLGLMSGIATGADYIFIPE 427 (989)
T ss_dssp SCTHHHHHHHHHHTCSEEECTT
T ss_pred chhHHHHHHHHhcCCCEEEeCC
Confidence 7999999999999999999985
No 181
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=24.47 E-value=69 Score=15.37 Aligned_cols=48 Identities=21% Similarity=0.167 Sum_probs=31.6
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+ ........+.|+--.+. +..+.+.|..++++++..
T Consensus 74 ~~~~ii~~s~~~~-~~~~~~~~~~ga~~~l~-Kp~~~~~l~~~i~~~~~~ 121 (126)
T 1dbw_A 74 INIPSIVITGHGD-VPMAVEAMKAGAVDFIE-KPFEDTVIIEAIERASEH 121 (126)
T ss_dssp CCCCEEEEECTTC-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCC-HHHHHHHHHhCHHHhee-CCCCHHHHHHHHHHHHHh
Confidence 4678888754444 33444555667655554 356899999999988753
No 182
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=24.10 E-value=74 Score=16.97 Aligned_cols=48 Identities=23% Similarity=0.252 Sum_probs=29.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+. .....+.+.|+--.+. +..+.+.|..+|+.++..
T Consensus 75 ~~~~ii~ls~~~~~-~~~~~a~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~ 122 (208)
T 1yio_A 75 DGIPIVFITAHGDI-PMTVRAMKAGAIEFLP-KPFEEQALLDAIEQGLQL 122 (208)
T ss_dssp CCCCEEEEESCTTS-CCCHHHHHTTEEEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHCCCcEEEe-CCCCHHHHHHHHHHHHhh
Confidence 46888887543332 2233444567654554 356888998888887654
No 183
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=24.01 E-value=55 Score=16.20 Aligned_cols=48 Identities=6% Similarity=0.072 Sum_probs=29.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+.. ....+.+.|+--.+. +.++.+.|..+|+.++..
T Consensus 77 ~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 77 SELPVVFLTAHTEPA-VVEKIRSVTAYGYVM-KSATEQVLITIVEMALRL 124 (140)
T ss_dssp CCCCEEEEESSSSCC-CCGGGGGSCEEEEEE-TTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHH-HHHHHHhCCCcEEEe-CCCCHHHHHHHHHHHHHH
Confidence 477887775433321 122334456544454 356899999999988753
No 184
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=23.99 E-value=74 Score=15.58 Aligned_cols=47 Identities=11% Similarity=0.171 Sum_probs=31.2
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..|+|++--..+. .......+.|+--.+. +.++.+.|..++++++..
T Consensus 81 ~~~ii~lt~~~~~-~~~~~~~~~ga~~~l~-KP~~~~~L~~~l~~~~~~ 127 (133)
T 2r25_B 81 TSPIVALTAFADD-SNIKECLESGMNGFLS-KPIKRPKLKTILTEFCAA 127 (133)
T ss_dssp CSCEEEEESCCSH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCH-HHHHHHHHcCCCEEEe-CCCCHHHHHHHHHHHHHh
Confidence 5688877544443 3444555667654554 356899999999998753
No 185
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.99 E-value=75 Score=15.60 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=28.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
...|+|++--..+.......+...|+--.+. +.++.+.|..+++.++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLT-KPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhcc-CCCCHHHHHHHHHHHHH
Confidence 4678877754444333333344445533343 35688999988888764
No 186
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=23.58 E-value=62 Score=22.47 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=20.4
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 571 ~aG~lAl~aglA~ga~~ilIPE 592 (766)
T 3o8o_B 571 NSGYLATYASLAVGAQVSYVPE 592 (766)
T ss_dssp TCCHHHHHHHHHHTCSEEECTT
T ss_pred chhHHHHHHHHhhCCCEEEeCC
Confidence 7999999999999999999984
No 187
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=23.57 E-value=46 Score=23.05 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=20.5
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-.+.+|-
T Consensus 211 ~aG~LAl~aglA~gad~ilIPE 232 (762)
T 3o8l_A 211 HCGYLALVTSLSCGADWVFIPE 232 (762)
T ss_dssp SCCHHHHHHHHHHTCSBCCCTT
T ss_pred chhHHHHHHHHhcCCCEEEecC
Confidence 7999999999999999999985
No 188
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=23.53 E-value=1e+02 Score=17.05 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 26 DQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 26 dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
|-..-+..++++|.-+.+. .+++.+++.++|+++...
T Consensus 66 Da~~L~~~f~~LgF~V~~~-~dlt~~em~~~l~~f~~~ 102 (178)
T 2h54_A 66 DITGMTMLLQNLGYSVDVK-KNLTASDMTTELEAFAHR 102 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCEEEEe-cCCCHHHHHHHHHHHHhh
Confidence 3445566678888887765 578999999999998653
No 189
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=23.52 E-value=57 Score=19.14 Aligned_cols=17 Identities=12% Similarity=0.348 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHhCC
Q psy381 47 NLNEDNIYDALITVLED 63 (70)
Q Consensus 47 ~~~~~~l~~~i~~~l~~ 63 (70)
+++++++.+++.+++.+
T Consensus 329 ~I~~~~V~~~~~~~l~~ 345 (348)
T 1psw_A 329 DITPQRVLEELNALLLQ 345 (348)
T ss_dssp TSCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHhcc
Confidence 57899999999998864
No 190
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=23.43 E-value=1.7e+02 Score=19.46 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=30.1
Q ss_pred HHHHHHHhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 7 SLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 7 t~~e~l~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
....++.+|+=+++.|...+... ..+.+ -+..+.++.++|.++++++|.
T Consensus 303 a~~~al~AG~D~~m~~~~~~~~~--~~l~~-----av~~G~i~~~~id~av~RiL~ 351 (602)
T 1x38_A 303 SVKASILAGLDMIMVPNKYQQFI--SILTG-----HVNGGVIPMSRIDDAVTRILR 351 (602)
T ss_dssp HHHHHHHHTCCBEECCSCHHHHH--HHHHH-----HHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCCcchhhHH--HHHHH-----HHhcCCCCHHHHHHHHHHHHH
Confidence 45677888998888875322211 11111 133456788889999888873
No 191
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=23.00 E-value=93 Score=16.35 Aligned_cols=48 Identities=17% Similarity=0.157 Sum_probs=30.0
Q ss_pred HhCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 13 HYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 13 ~~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
...+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+.++.
T Consensus 77 ~~~~~ii~lt~~~~~-~~~~~a~~~Ga~~~l~-KP~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 77 QPDARILVLTGYASI-ATAVQAVKDGADNYLA-KPANVESILAALQTNAS 124 (184)
T ss_dssp CTTCEEEEEESSCCH-HHHHHHHHHTCSEEEE-SSCCHHHHHHHTSTTHH
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHhCHHHhee-CCCCHHHHHHHHHHHHH
Confidence 347888888654443 3344455667644444 35678888888876654
No 192
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.74 E-value=76 Score=15.21 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=21.4
Q ss_pred HHHHHHHHhCceeEecCCCCCHHHHHHHHH
Q psy381 29 LNAQRIAKIKTGVVLEFDNLNEDNIYDALI 58 (70)
Q Consensus 29 ~na~~~~~~g~g~~~~~~~~~~~~l~~~i~ 58 (70)
-..+++.++|+-. -++++++++++.+.++
T Consensus 32 iql~RL~kLGI~k-tdP~~LT~eEi~~FaR 60 (71)
T 2eo2_A 32 IQLSRLKKLGIHK-TDPSTLTEEEVRKFAR 60 (71)
T ss_dssp HHHHHHHHHTCCC-CSTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCcccCCHHHHhhcee
Confidence 3456788888875 3568899999987665
No 193
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=22.70 E-value=85 Score=18.35 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=15.1
Q ss_pred cHHHHHHHHHhCCceeee
Q psy381 4 GLQSLQEAFHYGVKLICI 21 (70)
Q Consensus 4 G~~t~~e~l~~g~P~l~~ 21 (70)
....+.+.+..|.|+|++
T Consensus 131 sl~~L~~~I~~G~PVIv~ 148 (236)
T 3erv_A 131 SIEELYKSVKAGQPVVII 148 (236)
T ss_dssp CHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHCCCeEEEE
Confidence 456788899999999996
No 194
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.63 E-value=86 Score=15.81 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=31.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|++++.
T Consensus 80 ~~~pii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 80 RTIPVILLTILSDP-RDVVRSLECGADDFIT-KPCKDVVLASHVKRLLS 126 (154)
T ss_dssp TTSCEEEEECCCSH-HHHHHHHHHCCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 46788888654443 3344455667655554 35689999999998874
No 195
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.60 E-value=74 Score=15.01 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=29.5
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHh
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVL 61 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l 61 (70)
...|+|++--..+. .......+.|+--.+. +.++.+.|...+++++
T Consensus 74 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~ 119 (120)
T 1tmy_A 74 PNAKIIVCSAMGQQ-AMVIEAIKAGAKDFIV-KPFQPSRVVEALNKVS 119 (120)
T ss_dssp TTCCEEEEECTTCH-HHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHC
T ss_pred CCCeEEEEeCCCCH-HHHHHHHHhCcceeEe-CCCCHHHHHHHHHHHh
Confidence 46788887544443 3344455667654554 3568999999888764
No 196
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=22.56 E-value=74 Score=15.06 Aligned_cols=47 Identities=11% Similarity=0.225 Sum_probs=27.8
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+|+|++--..+ ......+.+.|+--.+. +.++.+.|..++++++..
T Consensus 75 ~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 75 HIPVVAVTAFAM-KGDEERIREGGCEAYIS-KPISVVHFLETIKRLLER 121 (124)
T ss_dssp TSCEEEEC-------CHHHHHHHTCSEEEC-SSCCHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCC-HHHHHHHHhCCCCEEEe-CCCCHHHHHHHHHHHHhc
Confidence 678887743322 23334444567654554 356899999999988754
No 197
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=22.22 E-value=46 Score=19.99 Aligned_cols=21 Identities=24% Similarity=0.254 Sum_probs=15.6
Q ss_pred CcHHHHHHHHH--------hCCceeeecC
Q psy381 3 GGLQSLQEAFH--------YGVKLICIPM 23 (70)
Q Consensus 3 gG~~t~~e~l~--------~g~P~l~~P~ 23 (70)
||=||+.|++. .++|+.++|.
T Consensus 90 GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 90 GGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp ESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred ccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 67788877642 4678888897
No 198
>2fu2_A Hypothetical protein SPY2152; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.15A {Streptococcus pyogenes}
Probab=21.85 E-value=89 Score=15.67 Aligned_cols=19 Identities=37% Similarity=0.510 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHhCChhhhh
Q psy381 50 EDNIYDALITVLEDPIFQF 68 (70)
Q Consensus 50 ~~~l~~~i~~~l~~~~~~~ 68 (70)
.++|.+.|+++.+|++.++
T Consensus 4 ~~~L~~~i~~ay~d~ev~~ 22 (102)
T 2fu2_A 4 EKEILDALSKVYSEQVIQA 22 (102)
T ss_dssp HHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHHHhCChhhcc
Confidence 4577778888877776554
No 199
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.49 E-value=1.2e+02 Score=17.01 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=32.0
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+. .....+.+.|+--.+. +.++.+.|..+|+.++..
T Consensus 107 ~~~~iI~lt~~~~~-~~~~~a~~~Ga~~yl~-Kp~~~~~L~~~i~~~l~~ 154 (249)
T 3q9s_A 107 SALPIIVLTARDTV-EEKVRLLGLGADDYLI-KPFHPDELLARVKVQLRQ 154 (249)
T ss_dssp CCCCEEEEESCCSH-HHHHHHHHHTCSEEEE-SSCCHHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHCCCcEEEE-CCCCHHHHHHHHHHHHhh
Confidence 36788877554443 3444555667655554 356899999999998865
No 200
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.44 E-value=80 Score=15.01 Aligned_cols=48 Identities=17% Similarity=0.211 Sum_probs=31.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
..+|+|++--..+. .......+.|+--.+. +.++.+.|..++++++..
T Consensus 74 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 121 (124)
T 1srr_A 74 ENIRVIIMTAYGEL-DMIQESKELGALTHFA-KPFDIDEIRDAVKKYLPL 121 (124)
T ss_dssp TTCEEEEEESSCCH-HHHHHHHHHTCCCEEE-SSCCHHHHHHHHHHHSCC
T ss_pred CCCCEEEEEccCch-HHHHHHHhcChHhhcc-CCCCHHHHHHHHHHHhcc
Confidence 47888887544443 3344445566654554 356899999999988754
No 201
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=21.36 E-value=1.1e+02 Score=16.74 Aligned_cols=48 Identities=8% Similarity=0.058 Sum_probs=29.8
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCCh
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDP 64 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~ 64 (70)
.+|+|++--..+.. ....+.+.|+--.+. +.++.+.|..+|+.++...
T Consensus 76 ~~~ii~lt~~~~~~-~~~~~~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~~ 123 (238)
T 2gwr_A 76 GVPIVMLTAKTDTV-DVVLGLESGADDYIM-KPFKPKELVARVRARLRRN 123 (238)
T ss_dssp CCCEEEEEETTCCS-CHHHHHHTTCCEEEE-ESCCHHHHHHHHHHHCCCC
T ss_pred CCcEEEEeCCCCHH-HHHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHhhc
Confidence 68888874433322 223344566644444 2568999999999987653
No 202
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=21.18 E-value=1.3e+02 Score=17.33 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=32.1
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+++++++- ..-++.+.+.|....+..+..+.+.+.++|.+.+..
T Consensus 220 ~~~~~~aIG-----~~Ta~~l~~~G~~~~~va~~~t~~~l~~al~~~~~~ 264 (269)
T 3re1_A 220 AGLPLFVPS-----PRVASLAQAAGARNVIDCRGASAAALLAALRDQPQP 264 (269)
T ss_dssp TTSCEEESS-----HHHHHHHHHHTCSSEEECSSSSHHHHHHHHHHSCCC
T ss_pred hCCeEEEEC-----HHHHHHHHHCCCCceEECCCCCHHHHHHHHHHHhcc
Confidence 356666552 445777888898776655677899999999887643
No 203
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=21.06 E-value=75 Score=17.27 Aligned_cols=15 Identities=0% Similarity=0.027 Sum_probs=12.4
Q ss_pred CHHHHHHHHHHHhCC
Q psy381 49 NEDNIYDALITVLED 63 (70)
Q Consensus 49 ~~~~l~~~i~~~l~~ 63 (70)
+.+.+.+.|+.++..
T Consensus 170 ~~e~l~~~i~~ll~k 184 (193)
T 3hz8_A 170 DWESGMNTIDLLADK 184 (193)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 788999999888754
No 204
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=20.56 E-value=1.1e+02 Score=16.35 Aligned_cols=47 Identities=9% Similarity=0.135 Sum_probs=30.8
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+|+|++--..+. .......+.|+--.+. +.++.+.|..+|+.++..
T Consensus 79 ~~~ii~ls~~~~~-~~~~~~~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~ 125 (215)
T 1a04_A 79 SGRIVVFSVSNHE-EDVVTALKRGADGYLL-KDMEPEDLLKALHQAAAG 125 (215)
T ss_dssp CSEEEEEECCCCH-HHHHHHHHTTCSEEEE-TTCCHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCH-HHHHHHHHcCCcEEEe-CCCCHHHHHHHHHHHHcC
Confidence 5777777554443 3444555667655554 356899999999988754
No 205
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=20.54 E-value=32 Score=17.56 Aligned_cols=33 Identities=15% Similarity=-0.059 Sum_probs=20.3
Q ss_pred HHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCChh
Q psy381 30 NAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65 (70)
Q Consensus 30 na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~~~ 65 (70)
...-+.-.|+-...- -+++++.+++++++.+++
T Consensus 14 tv~GFrLaGi~~~~v---~~~ee~~~~~~~l~~~~d 46 (109)
T 2d00_A 14 TAQGFRLAGLEGYGA---SSAEEAQSLLETLVERGG 46 (109)
T ss_dssp HHHHHHHTTSEEEEC---SSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCeEEEe---CCHHHHHHHHHHHhhCCC
Confidence 333444456633211 278999999999987644
No 206
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.51 E-value=94 Score=15.45 Aligned_cols=47 Identities=6% Similarity=0.033 Sum_probs=30.6
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhCC
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLED 63 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~~ 63 (70)
.+|+|++.-..+. .....+.+.|+--.+. +.++.++|..+++++...
T Consensus 90 ~~pii~~s~~~~~-~~~~~~~~~Ga~~~l~-KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 90 YTPVVVLSADVTP-EAIRACEQAGARAFLA-KPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCCEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHC--
T ss_pred CCeEEEEeCCCCH-HHHHHHHHcChhheee-CCCCHHHHHHHHHHHHHh
Confidence 3788888654443 3445566677755554 456899999999988754
No 207
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.47 E-value=92 Score=15.31 Aligned_cols=47 Identities=9% Similarity=0.152 Sum_probs=31.2
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCC-CHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNL-NEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~-~~~~l~~~i~~~l~ 62 (70)
..+|+|++--..+. .....+.+.|+--.+. +.. +.+.|..+|++++.
T Consensus 80 ~~~pii~~s~~~~~-~~~~~~~~~ga~~~l~-Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 80 QHTPIVILTDNVSD-DRAKQCMAAGASSVVD-KSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTCCEEEEETTCCH-HHHHHHHHTTCSEEEE-CCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHcCCCEEEE-CCCCcHHHHHHHHHHHHH
Confidence 36888888644443 3344455677765665 355 88999999988874
No 208
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=20.38 E-value=69 Score=21.29 Aligned_cols=22 Identities=9% Similarity=0.068 Sum_probs=19.9
Q ss_pred CCcHHHHHHHHHhCCceeeecC
Q psy381 2 QGGLQSLQEAFHYGVKLICIPM 23 (70)
Q Consensus 2 hgG~~t~~e~l~~g~P~l~~P~ 23 (70)
|+|+-++.-+++.|.-++.+|-
T Consensus 254 ~aG~lAl~a~LA~gad~ilIPE 275 (555)
T 2f48_A 254 SASHVALECALKTHPNICIVSE 275 (555)
T ss_dssp TSCHHHHHHHHHHCCSEECCHH
T ss_pred CHHHHHHHHHhhcCCCEEEecC
Confidence 7899999999999988888885
No 209
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=20.28 E-value=83 Score=14.72 Aligned_cols=47 Identities=4% Similarity=0.099 Sum_probs=29.9
Q ss_pred hCCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHHHhC
Q psy381 14 YGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62 (70)
Q Consensus 14 ~g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~~l~ 62 (70)
...|++++--..+. .......+.|+--.+. +..+.+.|...++.++.
T Consensus 71 ~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~ 117 (120)
T 2a9o_A 71 SSVPILMLSAKDSE-FDKVIGLELGADDYVT-KPFSNRELQARVKALLR 117 (120)
T ss_dssp CCCCEEEEESCCSH-HHHHHHHHHTCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCch-HHHHHHHhCCHhheEe-CCCCHHHHHHHHHHHHc
Confidence 46788877544443 3334445567654554 35689999999988764
No 210
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=20.17 E-value=1.3e+02 Score=17.01 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=27.7
Q ss_pred CCceeeecCCCChHHHHHHHHHhCceeEecCCCCCHHHHHHHHHH
Q psy381 15 GVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALIT 59 (70)
Q Consensus 15 g~P~l~~P~~~dq~~na~~~~~~g~g~~~~~~~~~~~~l~~~i~~ 59 (70)
+++++++- ..-++.+.+.|....+..+..+.+.+.++|.+
T Consensus 213 ~~~~~aIG-----~~Ta~~l~~~G~~~~~~a~~~~~~~l~~ai~~ 252 (254)
T 4es6_A 213 RLPLFVPS-----PRVAEMARELGAQRVIDCRGASAPALLAALTS 252 (254)
T ss_dssp TSCEEESS-----HHHHHHHHHTTCSSEEECSSSSHHHHHHHHHH
T ss_pred CCeEEEEC-----HHHHHHHHHcCCCceEECCCCCHHHHHHHHHh
Confidence 45555552 44577788888877665566788888888765
No 211
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=20.05 E-value=23 Score=15.54 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=15.1
Q ss_pred CCCCHHHHHHHHHHHhCC-hhhh
Q psy381 46 DNLNEDNIYDALITVLED-PIFQ 67 (70)
Q Consensus 46 ~~~~~~~l~~~i~~~l~~-~~~~ 67 (70)
.-++.+.+.+++..++.| +++.
T Consensus 7 ~~Ltk~Ql~qal~hLiknD~~Fl 29 (46)
T 2wx4_A 7 LLLNSTQFVQAFTYLIQNDKEFA 29 (46)
T ss_dssp GSTTSHHHHHHHHHHHHHCTTHH
T ss_pred ccCCHHHHHHHHHHHHHcCHHHH
Confidence 346788888888887654 4443
Done!