RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy381
(70 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 66.3 bits (160), Expect = 2e-15
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIA-KIKTGVVLEFDNLNEDNIYDALIT 59
G SL E+ GV LIC P FGDQ LN + + ++ GV +E + +
Sbjct: 343 THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQ 402
Query: 60 VLEDP 64
+L
Sbjct: 403 ILSQE 407
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 62.8 bits (151), Expect = 4e-14
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 8 LQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLEDPI 65
A G I +P DQ A R+A++ GV + D++ AL T L
Sbjct: 314 THVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPET 371
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 62.0 bits (149), Expect = 6e-14
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 3 GGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62
G + A GV + IP DQ A R+A + GV + +++ AL TVL
Sbjct: 310 GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLA 369
Query: 63 DPI 65
Sbjct: 370 PET 372
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 60.2 bits (144), Expect = 3e-13
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAK-IKTGVVLEFDNLNEDNIYDALIT 59
G S E+ GV ++C P F DQ + + I + G+ ++ N+ + + +
Sbjct: 370 THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINE 428
Query: 60 VLEDP 64
V+
Sbjct: 429 VIAGD 433
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 56.6 bits (135), Expect = 6e-12
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGD----QDLNAQRIAKIKTGVVLEFDNLNEDNIYDA 56
+ A G+ I + D Q +A R+A++ GV ++ D++ A
Sbjct: 292 HHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAA 351
Query: 57 LITVLEDPI 65
L T L I
Sbjct: 352 LDTALAPEI 360
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 56.3 bits (134), Expect = 6e-12
Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIA-KIKTGVVLEFDN---LNEDNIYDA 56
G S E+ G+ LI P++ +Q +NA ++ I+ + + + + +
Sbjct: 358 THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARV 417
Query: 57 LITVLEDP 64
+ ++E
Sbjct: 418 VKGLMEGE 425
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 55.1 bits (131), Expect = 2e-11
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAK-IKTGVVLEFDN------LNEDNI 53
G S+ E+ +GV ++ P++ +Q LNA R+ K G+ L D + + I
Sbjct: 354 SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEI 413
Query: 54 YDALITVLEDP 64
L +++
Sbjct: 414 EKGLKDLMDKD 424
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Length = 351
Score = 35.5 bits (80), Expect = 2e-04
Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMF---GDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDAL 57
+ G ++ E G+ + +P Q NA + K ++E L+ D + + L
Sbjct: 254 CRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTL 313
Query: 58 ITVLEDPIFQ 67
+ +
Sbjct: 314 AGWSRETLLT 323
>d1rrea_ d.14.1.10 (A:) ATP-dependent protease Lon (La), catalytic
domain {Escherichia coli [TaxId: 562]}
Length = 182
Score = 26.6 bits (58), Expect = 0.22
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 1 MQGGLQSLQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITV 60
+ G + L A G+K + IP N + + +I V+ + D I + L
Sbjct: 123 IGGLKEKLLAAHRGGIKTVLIPF-----ENKRDLEEIPDNVIADLDIHPVKRIEEVLTLA 177
Query: 61 LEDP 64
L++
Sbjct: 178 LQNE 181
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 25.3 bits (54), Expect = 0.66
Identities = 11/55 (20%), Positives = 23/55 (41%)
Query: 8 LQEAFHYGVKLICIPMFGDQDLNAQRIAKIKTGVVLEFDNLNEDNIYDALITVLE 62
Q V ++ D + I ++ V++E N D I + ++++LE
Sbjct: 123 RQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDVILEDILSLLE 177
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 226
Score = 23.5 bits (50), Expect = 2.9
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 8 LQEAFHYGVKLICI-PMFGDQDLNAQRIAKIKTGVVLEF 45
++A GV C+ P++ + + K+K VV +F
Sbjct: 23 ARKAEELGVAAYCVNPIYA--PVVRPLLRKVKLCVVADF 59
>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC
{Thermus thermophilus [TaxId: 274]}
Length = 211
Score = 23.0 bits (49), Expect = 3.6
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 9 QEAFHYGVKLICI-PMFGDQDLNAQRIAKIKTGVVLEF 45
+EA YG +CI P + A + V+ F
Sbjct: 25 EEALEYGFYGLCIPPSYVAWVRARYPHAPFRLVTVVGF 62
>d1fx0b2 b.49.1.1 (B:19-97) F1 ATP synthase beta subunit, domain 1
{Spinach (Spinacia oleracea), chloroplast [TaxId:
3562]}
Length = 79
Score = 21.9 bits (47), Expect = 6.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 30 NAQRIAKIKTGVV-LEFDNLNEDNIYDALITVLEDPIFQ 67
N RIA+I V+ + F NIY+ALI D Q
Sbjct: 1 NLGRIAQIIGPVLNVAFPPGKMPNIYNALIVKGRDTAGQ 39
>d1skye2 b.49.1.1 (E:1-82) F1 ATP synthase beta subunit, domain 1
{Bacillus sp., strain ps3 [TaxId: 1409]}
Length = 82
Score = 22.0 bits (47), Expect = 7.2
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 33 RIAKIKTGVV-LEFDNLNEDNIYDALITVLED 63
R+ ++ VV ++F+N + IY+AL +
Sbjct: 5 RVIQVMGPVVDVKFENGHLPAIYNALKIQHKA 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.146 0.426
Gapped
Lambda K H
0.267 0.0389 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 260,474
Number of extensions: 9744
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 15
Length of query: 70
Length of database: 2,407,596
Length adjustment: 38
Effective length of query: 32
Effective length of database: 1,885,856
Effective search space: 60347392
Effective search space used: 60347392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.8 bits)