BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3822
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CFE4|SCYL2_MOUSE SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1
Length = 930
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 23/114 (20%)
Query: 11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAP 70
K+ + + L+ GV+QL RHP++L+V HP+EE D LAF TEPV+ASLA++L E
Sbjct: 79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWE---- 134
Query: 71 NHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY 124
N +S ++Y D+E KYG+ QV S ++L+
Sbjct: 135 ------------------NLPSSISPDIKDYKLYDVETKYGLLQV-SEGLSFLH 169
>sp|Q6P3W7|SCYL2_HUMAN SCY1-like protein 2 OS=Homo sapiens GN=SCYL2 PE=1 SV=1
Length = 929
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 25/115 (21%)
Query: 11 KETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES-PA 69
K+ + + L+ GV+QL RHP++L+V HP+EE D LAF TEPV+ASLA++L E+ P+
Sbjct: 79 KDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPS 138
Query: 70 PNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYLY 124
P SP ++Y D+E KYG+ QV S ++L+
Sbjct: 139 P------------ISP-----------DIKDYKLYDVETKYGLLQV-SEGLSFLH 169
>sp|Q55BQ3|SCY2_DICDI Probable inactive serine/threonine-protein kinase scy2
OS=Dictyostelium discoideum GN=scy2 PE=3 SV=1
Length = 1125
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 1 MAEKLHKPKRKETVTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS 60
+ EK+ K + +T L+ L+ RHP IL V+ +EE + FATEP+ A+L
Sbjct: 65 LYEKVSKSNLENVIT-FLKKEATTLQRLRHPSILQVVSVMEETKTHIHFATEPILATLED 123
Query: 61 ILAFQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQV 115
+L + S+ ++QS +++ F ++E+K G+ Q+
Sbjct: 124 LLGYYRQ------------RKKSTVDQSSQSE-EGYKKKDFTFEELELKAGIFQI 165
>sp|Q9P7X5|PPK32_SCHPO Protein kinase domain-containing protein ppk32
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ppk32 PE=1 SV=1
Length = 749
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESPAPNHS 73
V E+LR V L RHP +L V+ P+EE +++F T + + L + N+
Sbjct: 74 VLELLRKDVSSLSRLRHPSLLQVVEPLEESKSSMSFVTRRIQSMLQDFIKSSNGGFSNYG 133
Query: 74 TNPVTGGSGSS 84
++ SG++
Sbjct: 134 SSANGKSSGNA 144
>sp|P53009|SCY1_YEAST Protein kinase-like protein SCY1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SCY1 PE=1 SV=1
Length = 804
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 16 EILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQES 67
EILR L +HP IL+++ P+EE F TE V +SL ++ F+E+
Sbjct: 82 EILRNQANNLAKLKHPNILTLIEPLEEHSKNFMFVTEFVTSSLETV--FRET 131
>sp|Q6BH42|MMM1_DEBHA Maintenance of mitochondrial morphology protein 1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=MMM1 PE=3 SV=2
Length = 448
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 14 VTEILRLGVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLAS----ILAFQE--S 67
+++ L LG++ + HP+ L+ + P++ + F+ A + + L Q +
Sbjct: 249 LSDTLTLGIETRLLLNHPRPLTAVLPVQLSVSIVRFSGCLTVALINTNDEEFLDLQNVTT 308
Query: 68 PAPNHSTNPVTGGSGSSPPPANQSASRPTH 97
P+P S P + P P N S+SR +H
Sbjct: 309 PSPGPSNEPNSQNQTQQPTPVNNSSSRASH 338
>sp|Q4N594|CYC_THEPA Cytochrome c OS=Theileria parva GN=TP02_0396 PE=3 SV=1
Length = 115
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 64 FQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYL 123
F+ A H+ N GGS P R + A +Y + D G+ D F YL
Sbjct: 22 FKSKCAQCHTIN--KGGSVKQGPNLYGFYGRKSGASDYAYSDANKNSGIVWSDKHLFVYL 79
Query: 124 YVPSTYLPSS 133
P Y+P +
Sbjct: 80 VNPKQYIPGT 89
>sp|P69470|COAT_TRVPS Coat protein OS=Tobacco rattle virus (strain PSG) PE=4 SV=1
Length = 209
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 73 STNPVTGGSGSSPPPANQSASRPT 96
++ P +GGSG++PPPA+ A RP
Sbjct: 185 ASTPASGGSGATPPPASGGAVRPN 208
>sp|P69471|COAT_TRVPL Coat protein OS=Tobacco rattle virus (strain PLB) PE=4 SV=1
Length = 209
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 73 STNPVTGGSGSSPPPANQSASRPT 96
++ P +GGSG++PPPA+ A RP
Sbjct: 185 ASTPASGGSGATPPPASGGAVRPN 208
>sp|Q4UEA0|CYC_THEAN Cytochrome c OS=Theileria annulata GN=TA12950 PE=3 SV=1
Length = 115
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 64 FQESPAPNHSTNPVTGGSGSSPPPANQSASRPTHAREYHFLDIEIKYGVAQVDSSEFTYL 123
F+ A H+ N GGS P R + + +Y + D G+ D F YL
Sbjct: 22 FKSKCAQCHTIN--KGGSVKQGPNLFGFYGRKSGSTDYAYSDANKNSGIVWSDKHLFVYL 79
Query: 124 YVPSTYLPSS 133
P Y+P +
Sbjct: 80 VNPKQYIPGT 89
>sp|Q0CPP9|MSH3_ASPTN DNA mismatch repair protein msh3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=msh3 PE=3 SV=1
Length = 1117
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 21 GVKQLEVYRHPKILSVLHPIEECPDALAFATEPVYASLASILAFQESP 68
G K+L + P+++ +L ++ +ALA A + YASL + +A P
Sbjct: 767 GTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANYQP 814
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,054,179
Number of Sequences: 539616
Number of extensions: 2087765
Number of successful extensions: 8028
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 7970
Number of HSP's gapped (non-prelim): 85
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)